Query psy9492
Match_columns 584
No_of_seqs 397 out of 3697
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 20:46:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9492.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9492hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-36 4.8E-41 298.6 22.5 210 14-231 33-244 (253)
2 2f8y_A Notch homolog 1, transl 100.0 4.5E-36 1.5E-40 288.6 21.1 210 17-234 4-215 (223)
3 3aji_A 26S proteasome non-ATPa 100.0 1E-35 3.5E-40 287.8 23.2 218 8-233 10-228 (231)
4 3b7b_A Euchromatic histone-lys 100.0 2.4E-35 8.2E-40 286.3 25.4 208 9-219 16-224 (237)
5 2xai_A ASB-9, ankyrin repeat a 100.0 2E-35 6.8E-40 291.8 23.9 210 10-231 9-218 (261)
6 3eu9_A Huntingtin-interacting 100.0 7.4E-35 2.5E-39 282.6 26.3 219 11-234 16-234 (240)
7 1k1a_A B-cell lymphoma 3-encod 100.0 2.1E-35 7.3E-40 287.1 20.1 211 13-231 18-237 (241)
8 1yyh_A HN1;, notch 1, ankyrin 100.0 4.5E-35 1.5E-39 287.9 20.3 201 28-235 1-215 (253)
9 3d9h_A CDNA FLJ77766, highly s 100.0 9.8E-35 3.4E-39 290.8 23.0 210 11-232 66-275 (285)
10 4b93_B Ankyrin repeat domain-c 100.0 2.5E-35 8.7E-40 292.2 18.4 201 13-216 20-229 (269)
11 1wdy_A 2-5A-dependent ribonucl 100.0 4.2E-34 1.5E-38 284.6 27.3 201 16-219 17-233 (285)
12 1oy3_D Transcription factor in 100.0 5.4E-35 1.9E-39 291.1 19.9 200 14-216 19-269 (282)
13 1oy3_D Transcription factor in 100.0 1E-34 3.5E-39 289.1 21.8 201 30-237 2-252 (282)
14 2dzn_A Probable 26S proteasome 100.0 1.6E-34 5.4E-39 278.7 22.1 203 11-215 9-218 (228)
15 3ljn_A Hypothetical protein; a 100.0 1.8E-34 6.2E-39 299.1 19.8 214 10-233 26-267 (364)
16 1wdy_A 2-5A-dependent ribonucl 100.0 2.9E-33 9.9E-38 278.5 26.7 221 10-237 45-280 (285)
17 3b7b_A Euchromatic histone-lys 100.0 1.7E-33 5.8E-38 273.2 24.4 199 28-234 2-201 (237)
18 2fo1_E LIN-12 protein; beta-ba 100.0 5.6E-34 1.9E-38 296.5 21.7 206 18-231 147-367 (373)
19 1s70_B 130 kDa myosin-binding 100.0 1.3E-34 4.3E-39 291.4 16.2 201 12-215 48-275 (299)
20 3utm_A Tankyrase-1; tankyrase, 100.0 2.2E-33 7.4E-38 288.4 25.4 216 13-235 33-305 (351)
21 1n11_A Ankyrin; clathrin, BAND 100.0 2.5E-33 8.4E-38 297.8 26.0 202 15-219 157-358 (437)
22 2rfa_A Transient receptor pote 100.0 2.3E-33 7.9E-38 271.5 22.2 193 36-236 2-223 (232)
23 3utm_A Tankyrase-1; tankyrase, 100.0 4.7E-33 1.6E-37 285.9 25.5 211 9-231 63-330 (351)
24 3d9h_A CDNA FLJ77766, highly s 100.0 5.8E-33 2E-37 277.9 24.9 197 29-235 51-247 (285)
25 1k1a_A B-cell lymphoma 3-encod 100.0 6.1E-33 2.1E-37 269.8 23.7 199 30-235 2-208 (241)
26 1n11_A Ankyrin; clathrin, BAND 100.0 6.7E-33 2.3E-37 294.5 26.1 216 11-234 120-335 (437)
27 3kea_A K1L; tropism, ANK repea 100.0 5.2E-34 1.8E-38 285.5 16.6 208 16-236 12-221 (285)
28 4g8k_A 2-5A-dependent ribonucl 100.0 7.4E-33 2.5E-37 283.8 25.0 218 12-235 33-298 (337)
29 4gpm_A Engineered protein OR26 100.0 4.7E-33 1.6E-37 255.6 20.1 159 39-200 6-164 (169)
30 2xai_A ASB-9, ankyrin repeat a 100.0 7.8E-33 2.7E-37 273.2 22.9 190 36-235 2-191 (261)
31 3hra_A Ankyrin repeat family p 100.0 2.8E-32 9.7E-37 257.6 22.5 190 34-231 2-199 (201)
32 2dzn_A Probable 26S proteasome 100.0 3.8E-32 1.3E-36 261.9 22.3 191 37-234 2-199 (228)
33 1ikn_D Protein (I-kappa-B-alph 100.0 9.4E-34 3.2E-38 275.2 11.0 197 31-234 2-208 (236)
34 3aji_A 26S proteasome non-ATPa 100.0 8.2E-32 2.8E-36 260.3 23.5 195 34-235 3-197 (231)
35 2etb_A Transient receptor pote 100.0 9.4E-33 3.2E-37 271.5 13.0 192 37-235 2-246 (256)
36 1sw6_A Regulatory protein SWI6 100.0 9.3E-33 3.2E-37 282.0 13.2 193 13-216 106-327 (327)
37 2rfa_A Transient receptor pote 100.0 1.4E-31 4.7E-36 259.0 20.5 193 8-202 7-227 (232)
38 2pnn_A Transient receptor pote 100.0 2.1E-32 7.3E-37 271.8 13.4 203 26-235 2-258 (273)
39 2f8y_A Notch homolog 1, transl 100.0 9.2E-31 3.1E-35 251.5 24.3 188 9-199 30-218 (223)
40 4b93_B Ankyrin repeat domain-c 100.0 6.9E-32 2.4E-36 267.5 15.8 198 31-235 5-210 (269)
41 1s70_B 130 kDa myosin-binding 100.0 3.4E-31 1.1E-35 266.4 21.0 214 14-235 8-257 (299)
42 3kea_A K1L; tropism, ANK repea 100.0 3.7E-32 1.3E-36 272.0 13.8 211 9-237 36-248 (285)
43 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-30 4.7E-35 266.9 25.0 198 28-237 116-328 (337)
44 4gpm_A Engineered protein OR26 100.0 3.9E-31 1.3E-35 242.8 18.6 155 73-234 6-160 (169)
45 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-31 3.7E-36 279.2 16.4 201 28-235 115-338 (373)
46 1ikn_D Protein (I-kappa-B-alph 100.0 1.4E-32 4.9E-37 266.8 8.6 195 17-214 21-228 (236)
47 3hra_A Ankyrin repeat family p 100.0 2.2E-30 7.5E-35 244.6 22.2 182 12-195 13-201 (201)
48 2etb_A Transient receptor pote 100.0 2.1E-31 7.2E-36 261.9 13.0 185 13-199 15-248 (256)
49 3ljn_A Hypothetical protein; a 100.0 2.9E-31 1E-35 274.9 14.7 200 27-235 10-236 (364)
50 3v30_A DNA-binding protein rfx 100.0 1.5E-30 5.1E-35 239.7 17.0 169 37-208 2-171 (172)
51 3eu9_A Huntingtin-interacting 100.0 8.5E-30 2.9E-34 246.9 21.7 199 29-235 1-202 (240)
52 3jxi_A Vanilloid receptor-rela 100.0 7.7E-31 2.6E-35 258.4 13.9 196 34-236 2-251 (260)
53 2pnn_A Transient receptor pote 100.0 1.5E-30 5E-35 258.5 15.2 195 14-209 27-271 (273)
54 2rfm_A Putative ankyrin repeat 100.0 4E-30 1.4E-34 241.3 17.2 163 30-195 28-190 (192)
55 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-29 3.9E-34 231.1 16.9 159 35-197 3-162 (162)
56 3v31_A Ankyrin repeat family A 100.0 1.7E-29 5.7E-34 231.4 17.2 160 36-198 2-161 (167)
57 4hbd_A KN motif and ankyrin re 100.0 5.8E-30 2E-34 254.8 14.1 187 37-231 76-271 (276)
58 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.9E-29 1.7E-33 229.0 18.9 159 34-195 11-169 (169)
59 3jxi_A Vanilloid receptor-rela 100.0 7.7E-30 2.6E-34 251.2 13.1 186 13-199 18-252 (260)
60 3f6q_A Integrin-linked protein 100.0 5.5E-29 1.9E-33 230.8 17.0 168 35-205 3-171 (179)
61 2rfm_A Putative ankyrin repeat 100.0 6.2E-29 2.1E-33 233.2 17.5 162 64-233 29-190 (192)
62 4hbd_A KN motif and ankyrin re 100.0 4E-29 1.4E-33 248.8 16.5 177 16-195 88-273 (276)
63 2vge_A RELA-associated inhibit 100.0 1.8E-31 6.1E-36 258.0 -0.7 199 20-224 1-207 (229)
64 3v31_A Ankyrin repeat family A 100.0 2.4E-28 8.2E-33 223.7 19.0 158 70-234 2-159 (167)
65 1awc_B Protein (GA binding pro 100.0 3.7E-28 1.3E-32 219.1 17.6 150 38-191 3-152 (153)
66 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.1E-28 1.7E-32 222.2 18.4 155 70-231 13-167 (169)
67 3twr_A Tankyrase-2; ankyrin re 100.0 1.8E-28 6E-33 224.1 14.0 160 33-196 4-164 (165)
68 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.1E-29 7.3E-34 245.2 6.6 180 34-217 2-193 (239)
69 1awc_B Protein (GA binding pro 100.0 1.7E-27 5.6E-32 214.9 18.0 151 71-229 2-152 (153)
70 3v30_A DNA-binding protein rfx 100.0 1.5E-27 5.3E-32 219.4 17.5 159 71-236 2-161 (172)
71 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.5E-28 2.9E-32 218.7 15.3 154 71-232 5-159 (162)
72 1sw6_A Regulatory protein SWI6 100.0 1.1E-28 3.8E-33 251.8 10.2 209 13-236 56-309 (327)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.1E-27 7.2E-32 214.7 17.1 153 37-194 2-155 (156)
74 3f6q_A Integrin-linked protein 99.9 3.1E-27 1.1E-31 219.0 14.8 161 70-237 4-165 (179)
75 3twr_A Tankyrase-2; ankyrin re 99.9 3.1E-27 1E-31 215.8 12.8 155 69-231 6-161 (165)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-26 3.5E-31 210.2 15.7 152 71-231 2-154 (156)
77 1bi7_B P16INK4A, MTS1, multipl 99.9 1.6E-26 5.6E-31 209.1 10.9 140 70-212 11-151 (156)
78 3t8k_A Uncharacterized protein 99.9 6.5E-27 2.2E-31 218.2 7.6 163 37-202 6-184 (186)
79 1d9s_A Cyclin-dependent kinase 99.9 4.4E-26 1.5E-30 201.3 12.4 133 27-162 2-135 (136)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.6E-26 1.9E-30 220.9 13.7 160 70-237 4-166 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 7.6E-26 2.6E-30 199.8 13.2 134 60-197 2-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 8.3E-26 2.8E-30 204.5 11.7 146 30-179 5-151 (156)
83 2vge_A RELA-associated inhibit 99.9 2.3E-26 7.8E-31 222.2 6.2 163 53-216 1-167 (229)
84 3t8k_A Uncharacterized protein 99.9 1E-25 3.5E-30 210.1 9.0 158 71-236 6-180 (186)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.8E-24 1.6E-28 184.7 16.0 125 71-197 2-126 (126)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 4.4E-24 1.5E-28 188.4 14.5 124 70-195 13-136 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.2E-23 1.1E-27 179.4 15.9 126 36-163 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-23 5.7E-28 184.7 14.1 127 33-161 10-136 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.9 4.8E-24 1.6E-28 188.3 10.1 132 27-161 1-132 (137)
90 2aja_A Ankyrin repeat family p 99.9 1.1E-25 3.9E-30 232.5 -2.3 166 18-200 80-253 (376)
91 3c5r_A BARD-1, BRCA1-associate 99.9 6.6E-24 2.3E-28 187.4 8.2 120 94-216 1-120 (137)
92 3deo_A Signal recognition part 99.9 3E-23 1E-27 192.9 12.1 140 34-194 41-181 (183)
93 3ui2_A Signal recognition part 99.9 2E-23 7E-28 203.5 10.8 142 35-197 43-185 (244)
94 2b0o_E UPLC1; arfgap, structur 99.9 2.2E-22 7.7E-27 202.2 15.9 140 71-218 151-299 (301)
95 3ui2_A Signal recognition part 99.9 2.4E-24 8.2E-29 210.1 1.0 168 36-232 14-182 (244)
96 3ehr_A Osteoclast-stimulating 99.9 6.8E-23 2.3E-27 196.6 9.5 135 70-206 72-207 (222)
97 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-22 5.9E-27 203.1 12.0 142 36-185 150-299 (301)
98 3deo_A Signal recognition part 99.9 1.8E-22 6E-27 187.7 10.6 137 70-231 43-180 (183)
99 2aja_A Ankyrin repeat family p 99.9 1.2E-23 4E-28 217.4 0.8 177 37-236 65-251 (376)
100 3aaa_C Myotrophin, protein V-1 99.9 3.4E-22 1.2E-26 172.9 9.9 109 35-144 5-113 (123)
101 3aaa_C Myotrophin, protein V-1 99.9 6.4E-22 2.2E-26 171.1 11.6 112 70-183 6-117 (123)
102 3ehr_A Osteoclast-stimulating 99.9 3.1E-22 1.1E-26 191.9 9.9 135 33-169 69-204 (222)
103 3lvq_E ARF-GAP with SH3 domain 99.9 3.3E-21 1.1E-25 207.7 16.4 139 72-212 133-280 (497)
104 1dcq_A PYK2-associated protein 99.9 1.5E-20 5.1E-25 186.7 19.0 199 27-235 51-263 (278)
105 3jue_A Arfgap with coiled-coil 99.8 1E-20 3.6E-25 194.6 14.0 144 71-216 199-348 (368)
106 3jue_A Arfgap with coiled-coil 99.8 9.3E-21 3.2E-25 195.0 13.3 162 35-198 197-365 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.8 5.5E-20 1.9E-24 198.1 16.8 137 37-181 132-276 (497)
108 1dcq_A PYK2-associated protein 99.8 2.7E-19 9.2E-24 177.7 19.9 126 72-199 131-265 (278)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-19 4.1E-24 148.5 11.9 91 71-162 2-92 (93)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.7E-19 5.7E-24 147.6 12.6 93 36-129 1-93 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 3.8E-20 1.3E-24 157.8 7.6 107 100-208 5-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 8.2E-20 2.8E-24 155.7 8.4 108 32-140 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 9.5E-17 3.2E-21 135.6 10.5 92 31-123 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 2.2E-16 7.6E-21 133.3 10.3 85 71-156 24-108 (110)
115 3j21_g 50S ribosomal protein L 60.4 4 0.00014 27.8 1.7 27 384-410 13-39 (51)
116 2ayj_A 50S ribosomal protein L 57.4 4.1 0.00014 28.2 1.3 27 384-410 18-44 (56)
117 1x4u_A Zinc finger, FYVE domai 45.4 10 0.00034 28.9 2.1 24 385-408 14-39 (84)
118 1wfk_A Zinc finger, FYVE domai 45.1 9.3 0.00032 29.5 1.8 26 383-408 7-34 (88)
119 1z2q_A LM5-1; membrane protein 42.9 11 0.00039 28.6 2.0 24 385-408 21-46 (84)
120 1vfy_A Phosphatidylinositol-3- 42.4 9 0.00031 28.3 1.3 23 386-408 12-36 (73)
121 2yw8_A RUN and FYVE domain-con 41.5 12 0.00041 28.3 2.0 24 385-408 19-44 (82)
122 1joc_A EEA1, early endosomal a 40.6 11 0.00039 31.1 1.8 23 386-408 70-94 (125)
123 1dvp_A HRS, hepatocyte growth 40.4 11 0.00036 34.8 1.7 24 386-409 162-187 (220)
124 3zyq_A Hepatocyte growth facto 33.2 15 0.00053 33.8 1.6 23 386-408 165-189 (226)
125 1y02_A CARP2, FYVE-ring finger 32.9 12 0.00042 30.6 0.8 23 386-408 20-44 (120)
126 2cr8_A MDM4 protein; ZF-ranbp 29.4 30 0.001 23.2 2.0 25 383-407 9-33 (53)
127 3t7l_A Zinc finger FYVE domain 29.3 22 0.00076 27.4 1.7 23 386-408 21-45 (90)
128 2c6a_A Ubiquitin-protein ligas 25.9 30 0.001 22.8 1.5 24 384-407 12-35 (46)
129 2dkt_A Ring finger and CHY zin 24.7 16 0.00053 30.9 -0.0 39 385-423 83-125 (143)
130 4g26_A Pentatricopeptide repea 24.0 1.1E+02 0.0037 31.8 6.4 27 158-187 167-193 (501)
131 4g26_A Pentatricopeptide repea 22.1 91 0.0031 32.3 5.3 104 14-124 87-198 (501)
132 3zrh_A Ubiquitin thioesterase 20.7 1.9E+02 0.0066 28.9 6.8 24 102-125 67-90 (454)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.4e-36 Score=298.64 Aligned_cols=210 Identities=22% Similarity=0.259 Sum_probs=184.2
Q ss_pred hhhHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy9492 14 ELTKVFVGKCVEAGQDVNEP-DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQ 92 (584)
Q Consensus 14 ~~~~~~l~~ll~~g~d~n~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 92 (584)
....++++.|+++|++++.. |..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~ 111 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM-GRTPLHAAVSADAQGVFQILIR 111 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHH
Confidence 34678899999999999764 899999999999999999999999999999987655 9999999999999999999999
Q ss_pred CCC-CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCC
Q psy9492 93 HGA-DPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIH 171 (584)
Q Consensus 93 ~ga-d~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~ 171 (584)
+|+ +++.+|..|.||||.|++.|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++.+|. .
T Consensus 112 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~ 189 (253)
T 1yyh_A 112 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN-NVDAAVVLLKNGANKDMQNN-R 189 (253)
T ss_dssp STTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT-CHHHHHHHHHTTCCTTCCCT-T
T ss_pred cCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCcCC-C
Confidence 997 99999999999999999999999999999999999999999999999999998 89999999999999999998 9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 172 GNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 172 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
|.||||+|+..|+.+++++|+++|+|++.+|..|+||+++|+++++.+ +++.|..
T Consensus 190 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~-----i~~~l~~ 244 (253)
T 1yyh_A 190 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD-----IVRLLDL 244 (253)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH-----HHHHHHC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHH-----HHHHHHH
Confidence 999999999999999999999999999999999999999999999999 8888865
No 2
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.5e-36 Score=288.63 Aligned_cols=210 Identities=22% Similarity=0.264 Sum_probs=197.8
Q ss_pred HHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy9492 17 KVFVGKCVEAGQDVNEP-DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGA 95 (584)
Q Consensus 17 ~~~l~~ll~~g~d~n~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga 95 (584)
.++++.|+++|.+++.. |.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++++
T Consensus 4 ~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~ 82 (223)
T 2f8y_A 4 PAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM-GRTPLHAAVSADAQGVFQILIRNRA 82 (223)
T ss_dssp -CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHBTT
T ss_pred HHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34567788999999876 899999999999999999999999999999987655 9999999999999999999999987
Q ss_pred -CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCc
Q psy9492 96 -DPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNV 174 (584)
Q Consensus 96 -d~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~T 174 (584)
+++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..|. .|.|
T Consensus 83 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~-~g~t 160 (223)
T 2f8y_A 83 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN-NVDAAVVLLKNGANKDMQNN-REET 160 (223)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TCCC
T ss_pred CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCCCcCC-CCcC
Confidence 89999999999999999999999999999999999999999999999999988 89999999999999999998 9999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHh
Q psy9492 175 ALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKD 234 (584)
Q Consensus 175 pLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~ 234 (584)
|||+|+..|+.+++++|+++|+|++.+|..|.||+++|++.++.+ +++.|.+.+.
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~-----i~~~L~~~g~ 215 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD-----IVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH-----HHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchH-----HHHHHHHcCC
Confidence 999999999999999999999999999999999999999999998 8998877443
No 3
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1e-35 Score=287.76 Aligned_cols=218 Identities=25% Similarity=0.307 Sum_probs=202.1
Q ss_pred cchhhhhhhHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHH
Q psy9492 8 KNWYEFELTKVFVGKCVEAG-QDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDS 86 (584)
Q Consensus 8 ~~~~~~~~~~~~l~~ll~~g-~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~ 86 (584)
..........+.++.+++.+ .+++..|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++
T Consensus 10 l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~ 88 (231)
T 3aji_A 10 ICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA-GWSPLHIAASAGXDEI 88 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHHTCHHH
T ss_pred HHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCC-CCCHHHHHHHcCHHHH
Confidence 34445566778888888865 557888999999999999999999999999999999987655 9999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCccc
Q psy9492 87 VVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTI 166 (584)
Q Consensus 87 v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~ 166 (584)
+++|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++.
T Consensus 89 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 89 VKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG-NLKMVHILLFYKASTNI 167 (231)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-CHHHHHHHHHTTCCSCC
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC-CHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999998 89999999999999999
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHH
Q psy9492 167 QDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELK 233 (584)
Q Consensus 167 ~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~ 233 (584)
+|. .|+||||+|+..|+.+++++|+++|+|++.+|..|+||+++|.+.++.+ +++.|.+.+
T Consensus 168 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~-----i~~lL~~~~ 228 (231)
T 3aji_A 168 QDT-EGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLI-----LKRLAEGEE 228 (231)
T ss_dssp CCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHH-----HHHHHHHHH
T ss_pred cCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHH-----HHHHHcccc
Confidence 998 9999999999999999999999999999999999999999999888777 777776644
No 4
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.4e-35 Score=286.29 Aligned_cols=208 Identities=26% Similarity=0.373 Sum_probs=196.5
Q ss_pred chhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHH
Q psy9492 9 NWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVV 88 (584)
Q Consensus 9 ~~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 88 (584)
+.+......++++.|+++|++++..|.+|.||||.|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 16 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~ 94 (237)
T 3b7b_A 16 HAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAE-GSTCLHLAAKKGHYEVVQ 94 (237)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTT-SCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCC-CCcHHHHHHHcCCHHHHH
Confidence 3444556788999999999999999999999999999999999999999999999877655 999999999999999999
Q ss_pred HHHHCC-CCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccc
Q psy9492 89 LLIQHG-ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQ 167 (584)
Q Consensus 89 ~Ll~~g-ad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~ 167 (584)
+|+++| ++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..
T Consensus 95 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~ 173 (237)
T 3b7b_A 95 YLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG-CVDIAEILLAAKCDLHAV 173 (237)
T ss_dssp HHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC-CHHHHHHHHTTTCCTTCC
T ss_pred HHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC-CHHHHHHHHHcCCCCCCc
Confidence 999998 899999999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCc
Q psy9492 168 DKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAP 219 (584)
Q Consensus 168 d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~ 219 (584)
|. .|.||||+|+..|+.+++++|+++|+|++.+|.+|.||+++|+.+++..
T Consensus 174 ~~-~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 174 NI-HGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp CT-TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHH
T ss_pred CC-CCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHH
Confidence 98 9999999999999999999999999999999999999999999988664
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=291.82 Aligned_cols=210 Identities=25% Similarity=0.290 Sum_probs=194.4
Q ss_pred hhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy9492 10 WYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVL 89 (584)
Q Consensus 10 ~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 89 (584)
.+......++++.|+++|+++|.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++
T Consensus 9 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~ 87 (261)
T 2xai_A 9 EAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD-WHTPLFNACVSGSWDCVNL 87 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHH
Confidence 334556789999999999999999999999999999999999999999999999987655 9999999999999999999
Q ss_pred HHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccC
Q psy9492 90 LIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDK 169 (584)
Q Consensus 90 Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~ 169 (584)
|+++|++++. +..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|+++|. |.
T Consensus 88 Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~-~~ 164 (261)
T 2xai_A 88 LLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ-QRACVKKLLESGADVNQ-GK 164 (261)
T ss_dssp HHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT-CHHHHHHHHHHTCCTTC-CB
T ss_pred HHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhC-CHHHHHHHHHcCCCCCC-CC
Confidence 9999999986 456999999999999999999999999999999999999999999988 89999999999999995 66
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 170 IHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 170 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
.|+||||+|+..|+.+++++|+++|+|++.+|.+|+||+++|.+++ + +++.|.+
T Consensus 165 -~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~-----~~~~ll~ 218 (261)
T 2xai_A 165 -GQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--P-----LAQLFLE 218 (261)
T ss_dssp -TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--T-----HHHHHHH
T ss_pred -CCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--c-----HHHHHHh
Confidence 8999999999999999999999999999999999999999999543 3 5666655
No 6
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=282.61 Aligned_cols=219 Identities=52% Similarity=0.866 Sum_probs=206.8
Q ss_pred hhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 11 YEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLL 90 (584)
Q Consensus 11 ~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 90 (584)
+......++++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++...+..|.||||+|+..|+.+++++|
T Consensus 16 A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~L 95 (240)
T 3eu9_A 16 ATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQL 95 (240)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHH
Confidence 34555789999999999999999999999999999999999999999999999887777799999999999999999999
Q ss_pred HHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCC
Q psy9492 91 IQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKI 170 (584)
Q Consensus 91 l~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~ 170 (584)
+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+.++...+++++|++.|++++..+..
T Consensus 96 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~ 175 (240)
T 3eu9_A 96 MKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY 175 (240)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTT
T ss_pred HHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhcc
Confidence 99999999999999999999999999999999999999999999999999999998886789999999999999999866
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHh
Q psy9492 171 HGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKD 234 (584)
Q Consensus 171 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~ 234 (584)
.|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|++.++.+ +++.|.+...
T Consensus 176 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~-----~v~~L~~~~~ 234 (240)
T 3eu9_A 176 HKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVW-----MINHLQEARQ 234 (240)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHH-----HHHHHHHHC-
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHH-----HHHHHHHhhh
Confidence 8999999999999999999999999999999999999999999999999 9998877443
No 7
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.1e-35 Score=287.14 Aligned_cols=211 Identities=22% Similarity=0.257 Sum_probs=191.7
Q ss_pred hhhhHHHHHHHHH----cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHH
Q psy9492 13 FELTKVFVGKCVE----AGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVV 88 (584)
Q Consensus 13 ~~~~~~~l~~ll~----~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 88 (584)
.....++++.|++ .|.+++..|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 18 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~ 96 (241)
T 1k1a_A 18 VQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRH-GQTAAHLACEHRSPTCLR 96 (241)
T ss_dssp HTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC-CCCHHHHHHHcCCHHHHH
Confidence 3445566666665 89999999999999999999999999999999999999887654 999999999999999999
Q ss_pred HHHHCCC----CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhhcCChhhHHHHHhcCCC
Q psy9492 89 LLIQHGA----DPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQD-RNGMTALMWSAYKVFSLDPTRLLITFGAS 163 (584)
Q Consensus 89 ~Ll~~ga----d~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~ 163 (584)
.|+++|+ +++.+|..|.||||.|+..|+.+++++|+++|++++..| ..|.||||+|+..| +.+++++|++.|++
T Consensus 97 ~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 97 ALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN-SLSMVQLLLQHGAN 175 (241)
T ss_dssp HHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT-CHHHHHHHHHTTCC
T ss_pred HHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC-CHHHHHHHHHcCCC
Confidence 9999987 888999999999999999999999999999999999999 78999999999988 89999999999999
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 164 TTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 164 ~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
++..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|+||+++|++.++.+ +++.|.+
T Consensus 176 ~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~-----i~~~l~~ 237 (241)
T 1k1a_A 176 VNAQMY-SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVID-----ILRGKAT 237 (241)
T ss_dssp TTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHH-----HHTC---
T ss_pred CCCcCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHH-----HHhhhcc
Confidence 999998 9999999999999999999999999999999999999999999988776 5555543
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.5e-35 Score=287.86 Aligned_cols=201 Identities=24% Similarity=0.281 Sum_probs=155.6
Q ss_pred CCCCCCCCCCCcHHHHHHHcC-------------CHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy9492 28 QDVNEPDSETVTLLHWAAINN-------------RIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG 94 (584)
Q Consensus 28 ~d~n~~d~~g~t~Lh~A~~~~-------------~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g 94 (584)
.|+|.+|.+|.||||+|+..| +.+++++|+++|++++...+..|.||||+|+..|+.+++++|+++|
T Consensus 1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 80 (253)
T 1yyh_A 1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS 80 (253)
T ss_dssp ---------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 478999999999999999977 8999999999999998776677999999999999999999999999
Q ss_pred CCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCC
Q psy9492 95 ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGI-NVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGN 173 (584)
Q Consensus 95 ad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~ 173 (584)
++++.+|..|.||||.|+..|+.+++++|+++|. +++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|+
T Consensus 81 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~d~-~g~ 158 (253)
T 1yyh_A 81 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA-VEGMLEDLINSHADVNAVDD-LGK 158 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT-CSSHHHHHHHTTCCTTCBCT-TSC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC-hHHHHHHHHHcCCCCCCcCC-CCC
Confidence 9999999999999999999999999999999987 89999999999999999998 89999999999999999998 999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 174 VALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 174 TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+ +++.|.+.+..
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~-----~v~~Ll~~ga~ 215 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE-----TAKVLLDHFAN 215 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-----HHHHHHHTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHH-----HHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999998 99999875443
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.8e-35 Score=290.75 Aligned_cols=210 Identities=25% Similarity=0.291 Sum_probs=184.1
Q ss_pred hhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 11 YEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLL 90 (584)
Q Consensus 11 ~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 90 (584)
+......++++.|++.|+++|.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|
T Consensus 66 Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~t~L~~A~~~~~~~~v~~L 144 (285)
T 3d9h_A 66 AAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD-WHTPLFNACVSGSWDCVNLL 144 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCHHHHHHHH
Confidence 34455678899999999999999999999999999999999999999999998877655 89999999999999999999
Q ss_pred HHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCC
Q psy9492 91 IQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKI 170 (584)
Q Consensus 91 l~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~ 170 (584)
+++|++++..+ .|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++. |.
T Consensus 145 l~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~-~~- 220 (285)
T 3d9h_A 145 LQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ-QRACVKKLLESGADVNQ-GK- 220 (285)
T ss_dssp HHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT-CHHHHHHHHHTTCCTTC-CB-
T ss_pred HHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC-cHHHHHHHHHCCCCCCC-CC-
Confidence 99999887644 4899999999999999999999999999999999999999999888 78999999999999984 65
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHH
Q psy9492 171 HGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITEL 232 (584)
Q Consensus 171 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~ 232 (584)
.|+||||+|+..|+.+++++|+++|+|++.+|.+|+||+++|.. +.+ +++.|.+.
T Consensus 221 ~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~-----~~~~Ll~~ 275 (285)
T 3d9h_A 221 GQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESP-----LAQLFLER 275 (285)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSH-----HHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccH-----HHHHHHHh
Confidence 89999999999999999999999999999999999999999983 344 67777663
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=292.23 Aligned_cols=201 Identities=25% Similarity=0.317 Sum_probs=162.5
Q ss_pred hhhhHHHHHHHHHcCCC--------CCCCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCcccccCCCCCCcHHHHHHHcCC
Q psy9492 13 FELTKVFVGKCVEAGQD--------VNEPDSETVTLLHWAAINNRI-EIMKYFISQGAIVDAIGGDLQATPLHWATRQGH 83 (584)
Q Consensus 13 ~~~~~~~l~~ll~~g~d--------~n~~d~~g~t~Lh~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~ 83 (584)
.....++++.|++.|.+ ++..|..|.||||.|+..++. ++++.|++.|+++|..+.. |.||||+|+..|+
T Consensus 20 ~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~-G~TpLh~A~~~g~ 98 (269)
T 4b93_B 20 ADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD-GSSPLHVAALHGR 98 (269)
T ss_dssp HTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT-SCCHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHcCc
Confidence 44567899999998875 566788999999999988765 4889999999999987765 9999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCC
Q psy9492 84 LDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGAS 163 (584)
Q Consensus 84 ~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~ 163 (584)
.+++++|++.|++++.++..|.||+|.|+..++.+++++|++.|++++.+|..|.||||+|+..| +.+++++|++.|++
T Consensus 99 ~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g-~~~~v~~Ll~~gad 177 (269)
T 4b93_B 99 ADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG-HHELVALLLQHGAS 177 (269)
T ss_dssp TTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT-CGGGHHHHHHTTCC
T ss_pred HHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC-CHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcC
Q psy9492 164 TTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENI 216 (584)
Q Consensus 164 ~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~ 216 (584)
+|.+|. .|+||||+|+..|+.+++++|+++|+|++.+|..|+|||++|++++
T Consensus 178 vn~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 178 INASNN-KGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp TTCBCT-TSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred CCcccc-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 999998 9999999999999999999999999999999999999999998755
No 11
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.2e-34 Score=284.56 Aligned_cols=201 Identities=28% Similarity=0.368 Sum_probs=104.0
Q ss_pred hHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy9492 16 TKVFVGKCVEAGQDVNEP-DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG 94 (584)
Q Consensus 16 ~~~~l~~ll~~g~d~n~~-d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g 94 (584)
..++++.|++.|++++.. +..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|
T Consensus 17 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 17 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN-GATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344555555555555544 444555555555555555555555555555544332 555555555555555555555555
Q ss_pred CCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHhhcCChhhHHHHHhc-CCC
Q psy9492 95 ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQ----------DRNGMTALMWSAYKVFSLDPTRLLITF-GAS 163 (584)
Q Consensus 95 ad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----------d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~-ga~ 163 (584)
++++.+|..|.||||.|+..|+.+++++|+++|++++.. +..|.||||+|+..| +.+++++|++. |++
T Consensus 96 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~~~~~ 174 (285)
T 1wdy_A 96 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG-HVEVLKILLDEMGAD 174 (285)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT-CHHHHHHHHHTSCCC
T ss_pred CCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcC-CHHHHHHHHHhcCCC
Confidence 555555555555555555555555555555555554444 444555555555444 44555555544 555
Q ss_pred cccccCCCCCcHHHHHHHcCC----HHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCc
Q psy9492 164 TTIQDKIHGNVALHWAIYAKN----HVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAP 219 (584)
Q Consensus 164 ~~~~d~~~g~TpLh~A~~~g~----~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~ 219 (584)
++..|. .|+||||+|+..++ .+++++|+++|+|++.+|..|.|||++|++.++.+
T Consensus 175 ~~~~~~-~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 233 (285)
T 1wdy_A 175 VNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG 233 (285)
T ss_dssp TTCCCT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred CCccCC-CCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 555444 45555555555544 44555555555555555555555555555554444
No 12
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.4e-35 Score=291.12 Aligned_cols=200 Identities=21% Similarity=0.193 Sum_probs=116.2
Q ss_pred hhhHHHHHHHHHcCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 14 ELTKVFVGKCVEAGQD---VNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLL 90 (584)
Q Consensus 14 ~~~~~~l~~ll~~g~d---~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 90 (584)
....++++.|++.|++ +|.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|
T Consensus 19 ~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~tpL~~A~~~~~~~~v~~L 97 (282)
T 1oy3_D 19 HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERG-GHTALHLACRVRAHTCACVL 97 (282)
T ss_dssp TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-SCCHHHHHTTTTCHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCcchhHhh
Confidence 3345566666666655 5566666666666666666666666666666666654433 66666666666666666666
Q ss_pred HHCCCC-----------------------------------------------CCCCCCCCChHHHHHHHhCCHHHHHHH
Q psy9492 91 IQHGAD-----------------------------------------------PTLMDSEGSTCIHQAAQFGHTRIVAYL 123 (584)
Q Consensus 91 l~~gad-----------------------------------------------~~~~d~~g~t~L~~A~~~g~~~~v~~L 123 (584)
+++|++ ++.+|..|.||||.|++.|+.+++++|
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 177 (282)
T 1oy3_D 98 LQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177 (282)
T ss_dssp SSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHH
Confidence 665543 445555666666666666666666666
Q ss_pred HHCCCCCCCCCCC-CCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy9492 124 VAKGINVNLQDRN-GMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPN 202 (584)
Q Consensus 124 l~~g~~~~~~d~~-g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n 202 (584)
+++|++++..+.. |.||||+|+..| +.+++++|++.|++++.+|. .|+||||+|+..|+.+++++|+++|+|++.+|
T Consensus 178 l~~g~~~~~~~~~~g~tpL~~A~~~~-~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 178 RDAGADLNKPEPTCGRTPLHLAVEAQ-AASVLELLLKAGADPTARMY-GGRTPLGSALLRPNPILARLLRAHGAPEPEDG 255 (282)
T ss_dssp HHHTCCTTCCCTTTCCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC
T ss_pred HHcCCCCCCCCCCCCcCHHHHHHHcC-CHHHHHHHHHcCCCCccccc-CCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCC
Confidence 6666666666543 666666666655 56666666666666666665 66666666666666666666666666666666
Q ss_pred CCCCCHHHHHHhcC
Q psy9492 203 AQGLTPFMLLEENI 216 (584)
Q Consensus 203 ~~g~tpl~lA~~~~ 216 (584)
..|.||++.|....
T Consensus 256 ~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 256 GDKLSPCSSSGSDS 269 (282)
T ss_dssp --------------
T ss_pred CcccccccccCCcc
Confidence 66666666665543
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1e-34 Score=289.12 Aligned_cols=201 Identities=19% Similarity=0.192 Sum_probs=186.3
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCc---ccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCh
Q psy9492 30 VNEPDSETVTLLHWAAINNRIEIMKYFISQGAI---VDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGST 106 (584)
Q Consensus 30 ~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 106 (584)
++.+|.+|.||||+|+..|+.+++++|+++|++ ++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQND-LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 477899999999999999999999999999888 665554 4999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCC-----------------------------------------------CCCCCCCCCc
Q psy9492 107 CIHQAAQFGHTRIVAYLVAKGIN-----------------------------------------------VNLQDRNGMT 139 (584)
Q Consensus 107 ~L~~A~~~g~~~~v~~Ll~~g~~-----------------------------------------------~~~~d~~g~t 139 (584)
|||+|++.|+.+++++|+++|++ ++.+|..|.|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999998755 6778899999
Q ss_pred HHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCc
Q psy9492 140 ALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAP 219 (584)
Q Consensus 140 ~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~ 219 (584)
|||+|+..| +.+++++|++.|++++..+...|+||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..++.+
T Consensus 161 ~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 161 PLHVAVIHK-DAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred HHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcH
Confidence 999999998 8999999999999999998745999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHHHHHhccc
Q psy9492 220 WLGKATVDKITELKDHYN 237 (584)
Q Consensus 220 ~l~~~~~~~l~~~~~~~~ 237 (584)
+++.|.+.+....
T Consensus 240 -----~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 240 -----LARLLRAHGAPEP 252 (282)
T ss_dssp -----HHHHHHHTTCCCC
T ss_pred -----HHHHHHHcCCCcC
Confidence 9999987555443
No 14
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.6e-34 Score=278.65 Aligned_cols=203 Identities=23% Similarity=0.274 Sum_probs=188.4
Q ss_pred hhhhhhHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHCC--CcccccCCCCCCcHHHHHHHcCCHHHH
Q psy9492 11 YEFELTKVFVGKCVEAGQDVNE-PDSETVTLLHWAAINNRIEIMKYFISQG--AIVDAIGGDLQATPLHWATRQGHLDSV 87 (584)
Q Consensus 11 ~~~~~~~~~l~~ll~~g~d~n~-~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g--~~~~~~~~~~g~tpLh~A~~~g~~~~v 87 (584)
.......++++.|++.|.+++. .|.+|.||||+|+..|+.+++++|+++| .+++...+..|.||||+|+..|+.+++
T Consensus 9 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 88 (228)
T 2dzn_A 9 ACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVV 88 (228)
T ss_dssp HHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHH
T ss_pred HHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHH
Confidence 3445578899999999887655 8999999999999999999999999999 566653445699999999999999999
Q ss_pred HHHHHCC--CCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcC-CCc
Q psy9492 88 VLLIQHG--ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFG-AST 164 (584)
Q Consensus 88 ~~Ll~~g--ad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~g-a~~ 164 (584)
++|+++| ++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.| +++
T Consensus 89 ~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 89 KSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG-SLKLIELLCGLGKSAV 167 (228)
T ss_dssp HHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT-CHHHHHHHHTTTCCCS
T ss_pred HHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC-CHHHHHHHHhcCcccc
Confidence 9999999 899999999999999999999999999999999999999999999999999988 899999999999 999
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHhc
Q psy9492 165 TIQDKIHGNVALHWAIYAKNHVAITTLV-SHTSSLEIPNAQGLTPFMLLEEN 215 (584)
Q Consensus 165 ~~~d~~~g~TpLh~A~~~g~~~~v~~Ll-~~gad~~~~n~~g~tpl~lA~~~ 215 (584)
+..|. .|+||||+|+..|+.+++++|+ ++|+|++.+|.+|+||+++|.+.
T Consensus 168 ~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 168 NWQDK-QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp CCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred cCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 99998 9999999999999999999999 89999999999999999999764
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.8e-34 Score=299.08 Aligned_cols=214 Identities=21% Similarity=0.239 Sum_probs=200.8
Q ss_pred hhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy9492 10 WYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVL 89 (584)
Q Consensus 10 ~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 89 (584)
+.......++++.|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++. ..|.||||+|+..|+.+++++
T Consensus 26 ~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~g~t~L~~A~~~g~~~~v~~ 102 (364)
T 3ljn_A 26 VAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL---WHGQKPIHLAVMANKTDLVVA 102 (364)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---BTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---cCCCCHHHHHHHcCCHHHHHH
Confidence 34455678899999999999999999999999999999999999999999997664 348899999999999999999
Q ss_pred HHHC----CCCCCC-----------------CCCCCChHHHHHHHhC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy9492 90 LIQH----GADPTL-----------------MDSEGSTCIHQAAQFG--HTRIVAYLVAKGINVNLQDRNGMTALMWSAY 146 (584)
Q Consensus 90 Ll~~----gad~~~-----------------~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~ 146 (584)
|+++ |++++. +|..|.||||.|+..| +.+++++|+++|++++.+|..|.||||+|+.
T Consensus 103 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 182 (364)
T 3ljn_A 103 LVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAME 182 (364)
T ss_dssp HHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 9999 888776 8889999999999999 9999999999999999999999999999999
Q ss_pred hcCChhhHHHHHhcCCC-----cccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccc
Q psy9492 147 KVFSLDPTRLLITFGAS-----TTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWL 221 (584)
Q Consensus 147 ~~~~~~~~~~Ll~~ga~-----~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l 221 (584)
.| +.+++++|++.|++ +|..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..++.+
T Consensus 183 ~g-~~~~v~~Ll~~g~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~-- 258 (364)
T 3ljn_A 183 FR-NREALDLMMDTVPSKSSLRLDYANK-QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVL-- 258 (364)
T ss_dssp TT-CHHHHHHHHHHCSCSSSCCTTCCCT-TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHH--
T ss_pred cC-CHHHHHHHHhcccccccccccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHH--
Confidence 98 89999999999999 999998 9999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHH
Q psy9492 222 GKATVDKITELK 233 (584)
Q Consensus 222 ~~~~~~~l~~~~ 233 (584)
+++.|.+..
T Consensus 259 ---~v~~Ll~~~ 267 (364)
T 3ljn_A 259 ---LTKELLQKT 267 (364)
T ss_dssp ---HHHHHHHHS
T ss_pred ---HHHHHHHcC
Confidence 999988743
No 16
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-33 Score=278.51 Aligned_cols=221 Identities=22% Similarity=0.250 Sum_probs=205.7
Q ss_pred hhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHH
Q psy9492 10 WYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVL 89 (584)
Q Consensus 10 ~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 89 (584)
.+......++++.|+++|++++..|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++
T Consensus 45 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~ 123 (285)
T 1wdy_A 45 NAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY-GFTAFMEAAVYGKVKALKF 123 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT-CCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcc-cCCHHHHHHHhCCHHHHHH
Confidence 334455789999999999999999999999999999999999999999999999987655 9999999999999999999
Q ss_pred HHHCCCCCCCC----------CCCCChHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhhcCC---hhhHH
Q psy9492 90 LIQHGADPTLM----------DSEGSTCIHQAAQFGHTRIVAYLVAK-GINVNLQDRNGMTALMWSAYKVFS---LDPTR 155 (584)
Q Consensus 90 Ll~~gad~~~~----------d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~Lh~Aa~~~~~---~~~~~ 155 (584)
|+++|++++.+ +..|.||||.|+..|+.+++++|+++ |++++..|..|.||||+|+..+.. .++++
T Consensus 124 Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~ 203 (285)
T 1wdy_A 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH 203 (285)
T ss_dssp HHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHH
T ss_pred HHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHH
Confidence 99999999987 78899999999999999999999998 999999999999999999988832 78999
Q ss_pred HHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHh
Q psy9492 156 LLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVS-HTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKD 234 (584)
Q Consensus 156 ~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~ 234 (584)
+|++.|++++..|. .|+||||+|+..|+.+++++|++ .|+|++.+|..|+||+++|++.++.+ +++.|.+.+.
T Consensus 204 ~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~-----i~~~Ll~~Ga 277 (285)
T 1wdy_A 204 LLLDHGADVNVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK-----IAELLCKRGA 277 (285)
T ss_dssp HHHHTTCCSSCCCT-TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHH-----HHHHHHHHSS
T ss_pred HHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHH-----HHHHHHHcCC
Confidence 99999999999998 99999999999999999999999 89999999999999999999999998 9999988655
Q ss_pred ccc
Q psy9492 235 HYN 237 (584)
Q Consensus 235 ~~~ 237 (584)
..+
T Consensus 278 ~~~ 280 (285)
T 1wdy_A 278 STD 280 (285)
T ss_dssp CSC
T ss_pred CCC
Confidence 543
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.7e-33 Score=273.22 Aligned_cols=199 Identities=30% Similarity=0.475 Sum_probs=189.9
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChH
Q psy9492 28 QDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTC 107 (584)
Q Consensus 28 ~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~ 107 (584)
.|++.+|.+|.||||.|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 80 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSED-QRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTC 80 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCH
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCC-CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcH
Confidence 578899999999999999999999999999999999987655 9999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHH
Q psy9492 108 IHQAAQFGHTRIVAYLVAKG-INVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHV 186 (584)
Q Consensus 108 L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~ 186 (584)
||.|+..|+.+++++|+++| .+++..|..|.||||+|+..+ +.+++++|++.|++++..|. .|.||||+|+..|+.+
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK-HVDLVKLLLSKGSDINIRDN-EENICLHWAAFSGCVD 158 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHCCCHH
Confidence 99999999999999999998 899999999999999999988 89999999999999999998 9999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHh
Q psy9492 187 AITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKD 234 (584)
Q Consensus 187 ~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~ 234 (584)
++++|+++|+|++.+|..|.||+++|++.++.+ +++.|.+.+.
T Consensus 159 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-----~v~~Ll~~ga 201 (237)
T 3b7b_A 159 IAEILLAAKCDLHAVNIHGDSPLHIAARENRYD-----CVVLFLSRDS 201 (237)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH-----HHHHHHTTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHh-----HHHHHHHcCC
Confidence 999999999999999999999999999999988 8888876443
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.6e-34 Score=296.49 Aligned_cols=206 Identities=23% Similarity=0.291 Sum_probs=193.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCC---
Q psy9492 18 VFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG--- 94 (584)
Q Consensus 18 ~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--- 94 (584)
..++.|++.|+|+|.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|
T Consensus 147 ~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 225 (373)
T 2fo1_E 147 HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-ERSALHQAAANRDFGMMVYMLNSTKLK 225 (373)
T ss_dssp HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCHHHHHHHTTSHHHH
T ss_pred HHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC-CCCHHHHHHHCCCHHHHHHHHhcCccc
Confidence 3455667999999999999999999999999999999999999999987654 999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHHhC---CHHHHHHHHHCCCCCCC--------CCCCCCcHHHHHHhhcCChhhHHHHHhcC-C
Q psy9492 95 ADPTLMDSEGSTCIHQAAQFG---HTRIVAYLVAKGINVNL--------QDRNGMTALMWSAYKVFSLDPTRLLITFG-A 162 (584)
Q Consensus 95 ad~~~~d~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~--------~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~g-a 162 (584)
++++.+|..|.||||+|+..+ +.+++++|+++|++++. .|..|.||||+|+..| +.+++++|++.| +
T Consensus 226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g-~~~~v~~Ll~~~~~ 304 (373)
T 2fo1_E 226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS-NMPIVKYLVGEKGS 304 (373)
T ss_dssp HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSC-CHHHHHHHHHHSCC
T ss_pred cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhC-CHHHHHHHHHhcCC
Confidence 899999999999999999998 89999999999999886 6779999999999988 899999999886 9
Q ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 163 STTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 163 ~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
+++.+|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+.+++.+ +++.|.+
T Consensus 305 ~~n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~-----iv~~Ll~ 367 (373)
T 2fo1_E 305 NKDKQDE-DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN-----IVDIFDR 367 (373)
T ss_dssp CTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHH-----HHHHHHT
T ss_pred CccCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHH-----HHHHHHh
Confidence 9999998 9999999999999999999999999999999999999999999999998 8888876
No 19
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-34 Score=291.43 Aligned_cols=201 Identities=27% Similarity=0.334 Sum_probs=185.8
Q ss_pred hhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy9492 12 EFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLI 91 (584)
Q Consensus 12 ~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 91 (584)
......++++.|+++|+++|..|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 48 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~-g~tpL~~A~~~g~~~~v~~Ll 126 (299)
T 1s70_B 48 CSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAASCGYLDIAEYLI 126 (299)
T ss_dssp HHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHH
Confidence 3455788999999999999999999999999999999999999999999999987665 999999999999999999999
Q ss_pred HCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHC-CCCC--------------------------CCCCCCCCcHHHHH
Q psy9492 92 QHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAK-GINV--------------------------NLQDRNGMTALMWS 144 (584)
Q Consensus 92 ~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~--------------------------~~~d~~g~t~Lh~A 144 (584)
++|++++.+|..|.||||+|+..++.++++.++.. |.++ ...+..|.||||+|
T Consensus 127 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A 206 (299)
T 1s70_B 127 SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206 (299)
T ss_dssp HTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHH
T ss_pred hCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHH
Confidence 99999999999999999999999999998877754 4443 23567899999999
Q ss_pred HhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q psy9492 145 AYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEEN 215 (584)
Q Consensus 145 a~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~ 215 (584)
+..| +.+++++|++.|+++|..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|+||+++|.+.
T Consensus 207 ~~~g-~~~~v~~Ll~~g~d~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 207 AAKG-YTEVLKLLIQARYDVNIKDY-DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHT-CHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred HHCC-cHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 9998 89999999999999999998 999999999999999999999999999999999999999999653
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.2e-33 Score=288.37 Aligned_cols=216 Identities=23% Similarity=0.233 Sum_probs=196.3
Q ss_pred hhhhHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy9492 13 FELTKVFVGKCVE-AGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLI 91 (584)
Q Consensus 13 ~~~~~~~l~~ll~-~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll 91 (584)
.....+.++.+++ .|.+++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 33 ~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~iv~~Ll 111 (351)
T 3utm_A 33 RSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG-GLVPLHNACSYGHYEVTELLL 111 (351)
T ss_dssp HHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCcHHHHHHHCCCHHHHHHHH
Confidence 3445666777766 49999999999999999999999999999999999999987655 999999999999999999999
Q ss_pred HCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC-------------------------------------
Q psy9492 92 QHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQD------------------------------------- 134 (584)
Q Consensus 92 ~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d------------------------------------- 134 (584)
++|++++.+|..|.||||.|+..|+.+++++|+++|++++..|
T Consensus 112 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
T 3utm_A 112 KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADL 191 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccH
Confidence 9999999999999999999999999999999999999987655
Q ss_pred -----------------CCCCcHHHHHHhhcC--ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 135 -----------------RNGMTALMWSAYKVF--SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 135 -----------------~~g~t~Lh~Aa~~~~--~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
..|.||||+|+..+. ..+++++|++.|+++|..|. .|+||||+|+..|+.+++++|+++|
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 192 AKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNK-DFMTPLHVAAERAHNDVMEVLHKHG 270 (351)
T ss_dssp HHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 456788888887742 47899999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 196 SSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 196 ad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
+|++.+|..|.|||++|+..++.+ +++.|.+.+..
T Consensus 271 a~~n~~d~~g~t~L~~A~~~~~~~-----~v~~Ll~~gad 305 (351)
T 3utm_A 271 AKMNALDSLGQTALHRAALAGHLQ-----TCRLLLSYGSD 305 (351)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHH-----HHHHHHHTTCC
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHH-----HHHHHHHcCCC
Confidence 999999999999999999999998 99999875544
No 21
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-33 Score=297.83 Aligned_cols=202 Identities=25% Similarity=0.311 Sum_probs=105.3
Q ss_pred hhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy9492 15 LTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG 94 (584)
Q Consensus 15 ~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g 94 (584)
...++++.|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++.|+++|
T Consensus 157 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g 235 (437)
T 1n11_A 157 GKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN-GYTPLHIAAKQNQVEVARSLLQYG 235 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTT-CCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3445555555555555555555555555555555555555555555555443322 455555555555555555555555
Q ss_pred CCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCc
Q psy9492 95 ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNV 174 (584)
Q Consensus 95 ad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~T 174 (584)
++++.++..|.||||.|++.|+.+++++|+++|++++..|..|.||||+|+..| +.+++++|++.|++++..|. .|+|
T Consensus 236 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~-~g~t 313 (437)
T 1n11_A 236 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEG-HVPVADVLIKHGVMVDATTR-MGYT 313 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT-CHHHHHHHHHHTCCTTCCCS-SCCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhCCccCCCCCC-CCCC
Confidence 555555555555555555555555555555555555555555555555555444 44455555555555554444 4555
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCc
Q psy9492 175 ALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAP 219 (584)
Q Consensus 175 pLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~ 219 (584)
|||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..++.+
T Consensus 314 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~ 358 (437)
T 1n11_A 314 PLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 358 (437)
T ss_dssp HHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHH
Confidence 555555555555555555555555555555555555555544444
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.3e-33 Score=271.48 Aligned_cols=193 Identities=28% Similarity=0.328 Sum_probs=179.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC-CCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-----CCCCCCCChHHH
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQ-GAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADP-----TLMDSEGSTCIH 109 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-----~~~d~~g~t~L~ 109 (584)
.|.||||+|+..|+.++++.|++. |++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAM-GETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCC-CCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 9999987655 999999999999999999999999887 777889999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCC-------------CCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHH
Q psy9492 110 QAAQFGHTRIVAYLVAKGINVNLQDR-------------NGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVAL 176 (584)
Q Consensus 110 ~A~~~g~~~~v~~Ll~~g~~~~~~d~-------------~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpL 176 (584)
.|+..|+.+++++|+++|++++.++. .|.||||+|+..| +.+++++|++.|++++.+|. .|+|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~d~-~g~t~L 158 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVG-SEEIVRLLIEHGADIRAQDS-LGNTVL 158 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHT-CHHHHHHHHHTTCCTTCCCT-TSCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcC-CHHHHHHHHHCCCCCCCCCC-CCCCHH
Confidence 99999999999999999999998876 7999999999998 89999999999999999998 999999
Q ss_pred HHHHHcCCHHHH----HHHHhcCCCC------CCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhcc
Q psy9492 177 HWAIYAKNHVAI----TTLVSHTSSL------EIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDHY 236 (584)
Q Consensus 177 h~A~~~g~~~~v----~~Ll~~gad~------~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~~ 236 (584)
|+|+..|+.+++ ++|+++|+++ +.+|..|.||+++|++.++.+ +++.|.+.....
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~-----~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIV-----MFQHLMQKRKHI 223 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHH-----HHHHHHHHHHHC
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHH-----HHHHHHhcCccc
Confidence 999999999988 9999999998 589999999999999999999 999998855544
No 23
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.7e-33 Score=285.87 Aligned_cols=211 Identities=29% Similarity=0.331 Sum_probs=193.2
Q ss_pred chhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHH
Q psy9492 9 NWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVV 88 (584)
Q Consensus 9 ~~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 88 (584)
+.+......++++.|+++|++++.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 63 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~ 141 (351)
T 3utm_A 63 HLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLW-QFTPLHEAASKNRVEVCS 141 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHH
Confidence 3444556789999999999999999999999999999999999999999999999987655 999999999999999999
Q ss_pred HHHHCCCCCCCCC------------------------------------------------------CCCChHHHHHHHh
Q psy9492 89 LLIQHGADPTLMD------------------------------------------------------SEGSTCIHQAAQF 114 (584)
Q Consensus 89 ~Ll~~gad~~~~d------------------------------------------------------~~g~t~L~~A~~~ 114 (584)
+|+++|++++..+ ..|.||||.|+..
T Consensus 142 ~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~ 221 (351)
T 3utm_A 142 LLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVAS 221 (351)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHC
T ss_pred HHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Confidence 9999999988655 4567899999998
Q ss_pred ---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 115 ---GHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTL 191 (584)
Q Consensus 115 ---g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~L 191 (584)
++.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|+++|.+|. .|+||||+|+..|+.+++++|
T Consensus 222 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~ga~~n~~d~-~g~t~L~~A~~~~~~~~v~~L 299 (351)
T 3utm_A 222 LHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA-HNDVMEVLHKHGAKMNALDS-LGQTALHRAALAGHLQTCRLL 299 (351)
T ss_dssp CSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHH
T ss_pred hCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHH
Confidence 5589999999999999999999999999999998 89999999999999999998 999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 192 VSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 192 l~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
+++|+|++.+|..|.||+++|.+ + +++.|.+
T Consensus 300 l~~gad~~~~~~~g~tal~~a~~----~-----~~~~l~~ 330 (351)
T 3utm_A 300 LSYGSDPSIISLQGFTAAQMGNE----A-----VQQILSE 330 (351)
T ss_dssp HHTTCCTTCCCTTSCCHHHHSCH----H-----HHHHHHH
T ss_pred HHcCCCCCCcCCCCCChhhhhhH----H-----HHHHHHh
Confidence 99999999999999999999843 2 6666655
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.8e-33 Score=277.88 Aligned_cols=197 Identities=20% Similarity=0.242 Sum_probs=185.4
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHH
Q psy9492 29 DVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCI 108 (584)
Q Consensus 29 d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L 108 (584)
.++.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD-HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 129 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT-CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 35778999999999999999999999999999999987765 99999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHH
Q psy9492 109 HQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAI 188 (584)
Q Consensus 109 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v 188 (584)
|.|+..|+.+++++|+++|++++..+ .|.||||+|+..| +.+++++|++.|++++..|. .|+||||+|+..|+.+++
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v 206 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG-HVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQQRACV 206 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT-CHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTTCHHHH
T ss_pred HHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC-CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHH
Confidence 99999999999999999999998654 5999999999998 89999999999999999998 999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 189 TTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 189 ~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
++|+++|+|++. |..|.|||++|+..++.+ +++.|.+.+..
T Consensus 207 ~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~-----~v~~Ll~~gad 247 (285)
T 3d9h_A 207 KKLLESGADVNQ-GKGQDSPLHAVVRTASEE-----LACLLMDFGAD 247 (285)
T ss_dssp HHHHHTTCCTTC-CBTTBCHHHHHHHTTCHH-----HHHHHHHTTCC
T ss_pred HHHHHCCCCCCC-CCCCCCHHHHHHHcCCHH-----HHHHHHHCCCC
Confidence 999999999995 999999999999999998 89998875443
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.1e-33 Score=269.78 Aligned_cols=199 Identities=21% Similarity=0.273 Sum_probs=183.4
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy9492 30 VNEPDSETVTLLHWAAINNRIEIMKYFIS----QGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGS 105 (584)
Q Consensus 30 ~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~----~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 105 (584)
++.+|.+|.||||+|+..|+.+++++|++ .|.+++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNL-RQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccccc-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 36789999999999999999999999997 78999887655 99999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCHHHHHHHHHCCC----CCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHH
Q psy9492 106 TCIHQAAQFGHTRIVAYLVAKGI----NVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIY 181 (584)
Q Consensus 106 t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~ 181 (584)
||||.|+..|+.+++++|++.|. +++..|..|.||||+|+..+ +.+++++|++.|++++..+...|.||||+|+.
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE-CQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC-CHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 99999999999999999999987 88999999999999999988 89999999999999999994389999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 182 AKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 182 ~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
.|+.+++++|+++|+|++.+|..|.||+++|+..++.+ +++.|.+.+..
T Consensus 160 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-----~v~~Ll~~ga~ 208 (241)
T 1k1a_A 160 NNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP-----LVRTLVRSGAD 208 (241)
T ss_dssp TTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH-----HHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH-----HHHHHHhcCCC
Confidence 99999999999999999999999999999999999988 89998875443
No 26
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-33 Score=294.50 Aligned_cols=216 Identities=22% Similarity=0.241 Sum_probs=173.4
Q ss_pred hhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 11 YEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLL 90 (584)
Q Consensus 11 ~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 90 (584)
.......++++.|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|
T Consensus 120 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 120 AAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN-GLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS-CCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHH
Confidence 33445667788888888888888888888888888888888888888888887766544 78888888888888888888
Q ss_pred HHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCC
Q psy9492 91 IQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKI 170 (584)
Q Consensus 91 l~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~ 170 (584)
+++|++++..+..|.||||.|+..|+.+++++|++.|++++..|..|.||||+|+..| +.+++++|++.|++++..|.
T Consensus 199 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~- 276 (437)
T 1n11_A 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEG-HAEMVALLLSKQANGNLGNK- 276 (437)
T ss_dssp GGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHTTTCCTTCCCT-
T ss_pred HhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCC-CHHHHHHHHhcCCCCCCCCC-
Confidence 8888888888888888888888888888888888888888888888888888888777 68888888888888888777
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHh
Q psy9492 171 HGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKD 234 (584)
Q Consensus 171 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~ 234 (584)
.|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+ +++.|.+.+.
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~-----~v~~Ll~~ga 335 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK-----LVKFLLQHQA 335 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSH-----HHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHH-----HHHHHHhcCC
Confidence 7888888888888888888888888888888888888888888888877 7777776443
No 27
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.2e-34 Score=285.47 Aligned_cols=208 Identities=17% Similarity=0.180 Sum_probs=189.6
Q ss_pred hHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy9492 16 TKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGA 95 (584)
Q Consensus 16 ~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga 95 (584)
..++.+.|.+ + ++|.+|.+|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|+
T Consensus 12 ~~~v~~lL~~-~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 12 SKQLKSFLSS-K-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp HHHHHHHHHS-T-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHh-C-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 3444444444 4 689999999999999999999999999999999998762 8999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCc
Q psy9492 96 DPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNG-MTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNV 174 (584)
Q Consensus 96 d~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g-~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~T 174 (584)
+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..| .||||+|+..| +.+++++|++.|++.... ..|.|
T Consensus 87 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~--~~g~t 163 (285)
T 3kea_A 87 DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN-DVSIVSYFLSEIPSTFDL--AILLS 163 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT-CHHHHHHHHTTSCTTCCC--STHHH
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC-CHHHHHHHHhCCCccccc--cCCcc
Confidence 999999999999999999999999999999999999999999 89999999998 899999999999887433 27999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCH-HHHHHhcCCCccchHHHHHHHHHHHhcc
Q psy9492 175 ALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTP-FMLLEENIGAPWLGKATVDKITELKDHY 236 (584)
Q Consensus 175 pLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tp-l~lA~~~~~~~~l~~~~~~~l~~~~~~~ 236 (584)
|||+|+..|+.+++++|+++|+|++.+|..|.|| |++|+..++.+ +++.|.+.+...
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~-----~v~~Ll~~gad~ 221 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE-----MLQALFKYDINI 221 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHH-----HHHHHTTSCBCS
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHH-----HHHHHHHcCCCC
Confidence 9999999999999999999999999999999998 99999999988 888887754443
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.4e-33 Score=283.79 Aligned_cols=218 Identities=22% Similarity=0.247 Sum_probs=193.8
Q ss_pred hhhhhHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCcccccC-----------------------
Q psy9492 12 EFELTKVFVGKCVEAGQDVNEPDS-ETVTLLHWAAINNRIEIMKYFISQGAIVDAIG----------------------- 67 (584)
Q Consensus 12 ~~~~~~~~l~~ll~~g~d~n~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~----------------------- 67 (584)
......++|+.|+++|+|+|.+|. .|.||||+|+..|+.+++++|+++|++++..+
T Consensus 33 v~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (337)
T 4g8k_A 33 VQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFL 112 (337)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhh
Confidence 345577899999999999999876 59999999999999999999999998775432
Q ss_pred ---------CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCChHHHHHHHhCCHHHHHHHHH-CC
Q psy9492 68 ---------GDLQATPLHWATRQGHLDSVVLLIQHGADPTLM----------DSEGSTCIHQAAQFGHTRIVAYLVA-KG 127 (584)
Q Consensus 68 ---------~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~----------d~~g~t~L~~A~~~g~~~~v~~Ll~-~g 127 (584)
+..|.||||+|+..|+.++++.|+++|++++.+ +..|.||||.|++.|+.+++++|++ .|
T Consensus 113 ~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 113 SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSC
T ss_pred hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Confidence 235899999999999999999999999988754 4468999999999999999999996 59
Q ss_pred CCCCCCCCCCCcHHHHHHhhcCC---hhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCCCC
Q psy9492 128 INVNLQDRNGMTALMWSAYKVFS---LDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH-TSSLEIPNA 203 (584)
Q Consensus 128 ~~~~~~d~~g~t~Lh~Aa~~~~~---~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~n~ 203 (584)
++++.+|..|.|++|.++..+.. .+++++|++.|+++|.+|. .|+||||+|+..|+.++++.|++. |+|++.+|.
T Consensus 193 ad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~-~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~ 271 (337)
T 4g8k_A 193 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 271 (337)
T ss_dssp CCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG-GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCT
T ss_pred CCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCC
Confidence 99999999999999988765532 3578999999999999998 999999999999999999999985 899999999
Q ss_pred CCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 204 QGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 204 ~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
+|+|||++|++.++.+ +++.|.+.+..
T Consensus 272 ~G~TpL~~A~~~g~~~-----iv~~Ll~~GAd 298 (337)
T 4g8k_A 272 DGKTALLLAVELKLKK-----IAELLCKRGAS 298 (337)
T ss_dssp TSCBHHHHHHHTTCHH-----HHHHHHTTSCS
T ss_pred CCCCHHHHHHHcCCHH-----HHHHHHHCCCC
Confidence 9999999999999998 99998775443
No 29
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.7e-33 Score=255.62 Aligned_cols=159 Identities=36% Similarity=0.452 Sum_probs=148.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHH
Q psy9492 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTR 118 (584)
Q Consensus 39 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~ 118 (584)
+.|+.||.+|+.++|+.|+++|+++|.++.. |.||||+|+..++.++++.|+++|+|++.+|..|.||||+|++.|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~-g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSD-GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 4799999999999999999999999987765 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q psy9492 119 IVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSL 198 (584)
Q Consensus 119 ~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~ 198 (584)
++++|+++|++++.+|.+|.||||+|+..| +.+++++|++.|++++.+|. .|+||||+|+..|+.+++++|+++|||+
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g-~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENG-HKEVVKLLISKGADVNTSDS-DGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999999999999999999999999999998 89999999999999999998 9999999999999999999999999998
Q ss_pred CC
Q psy9492 199 EI 200 (584)
Q Consensus 199 ~~ 200 (584)
+.
T Consensus 163 e~ 164 (169)
T 4gpm_A 163 EH 164 (169)
T ss_dssp --
T ss_pred CC
Confidence 75
No 30
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.8e-33 Score=273.20 Aligned_cols=190 Identities=21% Similarity=0.261 Sum_probs=178.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD-HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 6899999999999999999999999999987765 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 116 HTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
+.+++++|+++|++++. +..|.||||+|+..| +.+++++|++.|++++..|. .|+||||+|+..|+.+++++|+++|
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRG-HVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC-cHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999985 456999999999998 89999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 196 SSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 196 ad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
+|++. |..|.|||++|+..++.+ +++.|.+.+..
T Consensus 158 ~~~~~-~~~g~t~Lh~A~~~~~~~-----~v~~Ll~~gad 191 (261)
T 2xai_A 158 ADVNQ-GKGQDSPLHAVARTASEE-----LACLLMDFGAD 191 (261)
T ss_dssp CCTTC-CBTTBCHHHHHHHHTCHH-----HHHHHHHTTCC
T ss_pred CCCCC-CCCCCChHHHHHHcCCHH-----HHHHHHHcCCC
Confidence 99996 899999999999999998 99999875444
No 31
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.8e-32 Score=257.59 Aligned_cols=190 Identities=23% Similarity=0.267 Sum_probs=177.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCC-cccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q psy9492 34 DSETVTLLHWAAINNRIEIMKYFISQGA-IVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAA 112 (584)
Q Consensus 34 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~ 112 (584)
+..+.||||.|+..|+.+.++.|++.+. +++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTE-GNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3567899999999999999999999876 78776654 999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcC-CCcccccCCCCCcHHHHHHHcCC-----H
Q psy9492 113 QFGHTRIVAYLV-AKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFG-ASTTIQDKIHGNVALHWAIYAKN-----H 185 (584)
Q Consensus 113 ~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~g-a~~~~~d~~~g~TpLh~A~~~g~-----~ 185 (584)
..|+.+++++|+ ..+.+++..|..|.||||+|+..| +.+++++|++.| ++++.+|. .|+||||+|+..++ .
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG-HIDNVKLLLEDGREDIDFQND-FGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT-CHHHHHHHHHHCCCCTTCCCT-TSCCHHHHHHHSSCCSHHHH
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCcCCCCC-CCCCHHHHHHHhccchhhHH
Confidence 999999999999 557899999999999999999998 899999999999 99999998 99999999999998 9
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 186 VAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 186 ~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
+++++|+++|+|++.+|..|.||+++|++.++.+ +++.|.+
T Consensus 159 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~-----~~~~Ll~ 199 (201)
T 3hra_A 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTE-----ISKILAQ 199 (201)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-----HHHHHHT
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHh-----HHHHHHh
Confidence 9999999999999999999999999999999998 8887754
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.8e-32 Score=261.95 Aligned_cols=191 Identities=21% Similarity=0.230 Sum_probs=178.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCCCC-CCCCCChHHHHHHH
Q psy9492 37 TVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG--ADPTL-MDSEGSTCIHQAAQ 113 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g--ad~~~-~d~~g~t~L~~A~~ 113 (584)
|.||||.|+..|+.++++.|+++|.+++...+..|.||||+|+..|+.+++++|+++| .+++. +|..|.||||.|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 6899999999999999999999999887755667999999999999999999999999 55555 78899999999999
Q ss_pred hCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 114 FGHTRIVAYLVAKG--INVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTL 191 (584)
Q Consensus 114 ~g~~~~v~~Ll~~g--~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~L 191 (584)
.|+.+++++|+++| .+++..|..|.||||+|+..+ +.+++++|++.|++++..|. .|+||||+|+..|+.+++++|
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK-WFEVSQFLIENGASVRIKDK-FNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcC-CHhHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999998 899999999999999999988 89999999999999999998 999999999999999999999
Q ss_pred HhcC-CCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHH-HHHh
Q psy9492 192 VSHT-SSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKIT-ELKD 234 (584)
Q Consensus 192 l~~g-ad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~-~~~~ 234 (584)
+++| ++++.+|..|.||+++|+..++.+ +++.|. +.+.
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~-----~v~~Ll~~~ga 199 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGD-----AAVLLVEKYGA 199 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHH-----HHHHHHHHHCC
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHH-----HHHHHHHhcCC
Confidence 9999 999999999999999999999998 888887 4443
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=9.4e-34 Score=275.19 Aligned_cols=197 Identities=24% Similarity=0.301 Sum_probs=176.2
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC----cccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCh
Q psy9492 31 NEPDSETVTLLHWAAINNRIEIMKYFISQGA----IVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGST 106 (584)
Q Consensus 31 n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 106 (584)
+.+|.+|.||||+|+..|+.++++.|++.+. +++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-QQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTT-CCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 4578999999999999999999999998765 57766554 999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHH
Q psy9492 107 CIHQAAQFGHTRIVAYLVAKGIN------VNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAI 180 (584)
Q Consensus 107 ~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~ 180 (584)
|||+|+..|+.+++++|++.|.+ ++..|..|.||||+|+..| +.+++++|++.|++++.++...|+||||+|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG-YLGIVELLVSLGADVNAQEPCNGRTALHLAV 159 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTT-CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999876 5778889999999999998 8999999999999999998658999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHh
Q psy9492 181 YAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKD 234 (584)
Q Consensus 181 ~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~ 234 (584)
..|+.+++++|+++|+|++.+|..|.||+++|+..++.+ +++.|.+.+.
T Consensus 160 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~-----~~~~Ll~~ga 208 (236)
T 1ikn_D 160 DLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR-----IQQQLGQLTL 208 (236)
T ss_dssp HTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH-----HHHHHHTTSC
T ss_pred HcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchH-----HHHHHHHcch
Confidence 999999999999999999999999999999999999988 8888877444
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.2e-32 Score=260.27 Aligned_cols=195 Identities=25% Similarity=0.293 Sum_probs=182.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q psy9492 34 DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQ 113 (584)
Q Consensus 34 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~ 113 (584)
+..+.+|||.|+..|+.+.++.+++.+.......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 34678999999999999999999998766544455569999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy9492 114 FGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVS 193 (584)
Q Consensus 114 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~ 193 (584)
.|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~ 160 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKN-RHEIAVMLLEGGANPDAKDH-YDATAMHRAAAKGNLKMVHILLF 160 (231)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999999999988 89999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 194 HTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 194 ~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
+|+|++.+|..|.||+++|+..++.+ +++.|.+.+..
T Consensus 161 ~g~~~~~~~~~g~t~L~~A~~~~~~~-----~v~~Ll~~ga~ 197 (231)
T 3aji_A 161 YKASTNIQDTEGNTPLHLACDEERVE-----EAKFLVTQGAS 197 (231)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHH-----HHHHHHHTTCC
T ss_pred cCCCccccCCCCCCHHHHHHHCCCHH-----HHHHHHHCCCC
Confidence 99999999999999999999999988 88888875443
No 35
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=9.4e-33 Score=271.54 Aligned_cols=192 Identities=23% Similarity=0.220 Sum_probs=171.0
Q ss_pred CCcHHHHHHHcCCHH----HHHHHHHCCCcccc---cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCC------
Q psy9492 37 TVTLLHWAAINNRIE----IMKYFISQGAIVDA---IGGDLQATPLHWATRQ---GHLDSVVLLIQHGADPTLM------ 100 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~----~v~~Ll~~g~~~~~---~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~gad~~~~------ 100 (584)
|.||||.|+..|+.+ ++++|+++|++++. ..+..|.||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 66777789999987 2334599999999999 9999999999998877633
Q ss_pred -----CCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC-------------CCcHHHHHHhhcCChhhHHHHHh---
Q psy9492 101 -----DSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRN-------------GMTALMWSAYKVFSLDPTRLLIT--- 159 (584)
Q Consensus 101 -----d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-------------g~t~Lh~Aa~~~~~~~~~~~Ll~--- 159 (584)
|..|.||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..| +.+++++|++
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~-~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-QWDVVTYLLENPH 160 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT-CHHHHHHHHHCSS
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcC-CHHHHHHHHhccc
Confidence 477999999999999999999999999999999886 999999999888 8999999999
Q ss_pred cCCCcccccCCCCCcHHHHHHH--cCCHH-------HHHHHHhcCCCC-------CCCCCCCCCHHHHHHhcCCCccchH
Q psy9492 160 FGASTTIQDKIHGNVALHWAIY--AKNHV-------AITTLVSHTSSL-------EIPNAQGLTPFMLLEENIGAPWLGK 223 (584)
Q Consensus 160 ~ga~~~~~d~~~g~TpLh~A~~--~g~~~-------~v~~Ll~~gad~-------~~~n~~g~tpl~lA~~~~~~~~l~~ 223 (584)
.|+++|.+|. .|+||||+|+. .++.+ ++++|+++|+|+ +.+|..|.||+++|++.++.+
T Consensus 161 ~ga~~n~~d~-~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~---- 235 (256)
T 2etb_A 161 QPASLEATDS-LGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIE---- 235 (256)
T ss_dssp CCCCTTCCCT-TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHH----
T ss_pred cCCCcCccCC-CCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHH----
Confidence 9999999998 99999999999 78888 999999999999 899999999999999999988
Q ss_pred HHHHHHHHHHhc
Q psy9492 224 ATVDKITELKDH 235 (584)
Q Consensus 224 ~~~~~l~~~~~~ 235 (584)
+++.|.+....
T Consensus 236 -~v~~Ll~~g~~ 246 (256)
T 2etb_A 236 -IFRHILQREFS 246 (256)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHhCCCC
Confidence 88888775443
No 36
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=9.3e-33 Score=281.97 Aligned_cols=193 Identities=18% Similarity=0.130 Sum_probs=165.8
Q ss_pred hhhhHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCC---HHHHH
Q psy9492 13 FELTKVFVGKCVEAGQDVNE-PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGH---LDSVV 88 (584)
Q Consensus 13 ~~~~~~~l~~ll~~g~d~n~-~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~---~~~v~ 88 (584)
.....++++.|++.|+|+|. +|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+ .++++
T Consensus 106 ~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~-g~TpLh~A~~~g~~~~~~~~~ 184 (327)
T 1sw6_A 106 DSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM-GESCLVKAVKSVNNYDSGTFE 184 (327)
T ss_dssp HHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTT-CCCHHHHHHHSSHHHHTTCHH
T ss_pred HhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHhcccccHHHHH
Confidence 44556788888999999999 8999999999999999999999999999999987655 9999999999998 78888
Q ss_pred HHHHCC-CCCCCCCCCCChHHHHHHH----hCCHHHHHHHHHC--------------------CCCCCCCCCCCCcHHHH
Q psy9492 89 LLIQHG-ADPTLMDSEGSTCIHQAAQ----FGHTRIVAYLVAK--------------------GINVNLQDRNGMTALMW 143 (584)
Q Consensus 89 ~Ll~~g-ad~~~~d~~g~t~L~~A~~----~g~~~~v~~Ll~~--------------------g~~~~~~d~~g~t~Lh~ 143 (584)
.|++++ ++++.+|..|.||||+|++ .|+.+++++|++. |++++.+|..|.||||.
T Consensus 185 ~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~ 264 (327)
T 1sw6_A 185 ALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILE 264 (327)
T ss_dssp HHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHH
T ss_pred HHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHH
Confidence 888887 7899999999999999999 8999999999987 89999999999999999
Q ss_pred HHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcC
Q psy9492 144 SAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENI 216 (584)
Q Consensus 144 Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~ 216 (584)
|+. +++|++. ++|.+|. .|+||||+|+..|+.+++++|+++|||++.+|..|+|||++|++.+
T Consensus 265 a~~-------~~~Ll~~--~~n~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 265 NLD-------LKWIIAN--MLNAQDS-NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HCS-------HHHHHHH--TTTCCCT-TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHH-------HHHHHHh--CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 884 7888888 6888998 9999999999999999999999999999999999999999998754
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=1.4e-31 Score=258.96 Aligned_cols=193 Identities=20% Similarity=0.194 Sum_probs=172.1
Q ss_pred cchhhhhhhHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccc----cCCCCCCcHHHHHHHcC
Q psy9492 8 KNWYEFELTKVFVGKCVEA-GQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDA----IGGDLQATPLHWATRQG 82 (584)
Q Consensus 8 ~~~~~~~~~~~~l~~ll~~-g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~----~~~~~g~tpLh~A~~~g 82 (584)
...+......++++.|++. |+++|.+|.+|.||||+|+..|+.+++++|+++|+++.. ..+..|.||||+|+..|
T Consensus 7 L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 7 LLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQ 86 (232)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcC
Confidence 3444556678899999997 999999999999999999999999999999999988732 22345999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCC-------------CCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 83 HLDSVVLLIQHGADPTLMDS-------------EGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 83 ~~~~v~~Ll~~gad~~~~d~-------------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
+.+++++|+++|++++.++. .|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~- 165 (232)
T 2rfa_A 87 NVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQP- 165 (232)
T ss_dssp CHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCS-
T ss_pred CHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-
Confidence 99999999999999998866 7999999999999999999999999999999999999999999988
Q ss_pred ChhhH----HHHHhcCCCc------ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q psy9492 150 SLDPT----RLLITFGAST------TIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPN 202 (584)
Q Consensus 150 ~~~~~----~~Ll~~ga~~------~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n 202 (584)
+.+++ ++|++.|+++ +..|. .|+||||+|+..|+.+++++|+++|++.....
T Consensus 166 ~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~-~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 166 NKTFACQMYNLLLSYDGGDHLKSLELVPNN-QGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp CHHHHHHHHHHHHHTTCSCSSCCGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred ChHHHHHHHHHHHhcCCchhhhhhhccCCC-CCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 77777 9999999988 57787 99999999999999999999999998776544
No 38
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.1e-32 Score=271.75 Aligned_cols=203 Identities=19% Similarity=0.208 Sum_probs=174.7
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCcccc---cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCC
Q psy9492 26 AGQDVNEPDSETVTLLHWAAINNRIEIMKYFIS----QGAIVDA---IGGDLQATPLHWATRQ---GHLDSVVLLIQHGA 95 (584)
Q Consensus 26 ~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~----~g~~~~~---~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~ga 95 (584)
.|+..+..|..|.||||.|+..|+.++++.|++ .+++++. ..+..|.||||+|+.. |+.+++++|+++|+
T Consensus 2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 467778899999999999999999999888886 5655542 3345699999999987 99999999999986
Q ss_pred CC-------C----CCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCC--------------CCCcHHHHHHhhcCC
Q psy9492 96 DP-------T----LMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDR--------------NGMTALMWSAYKVFS 150 (584)
Q Consensus 96 d~-------~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~--------------~g~t~Lh~Aa~~~~~ 150 (584)
++ + .+|..|.||||+|++.|+.+++++|+++|++++.+|. .|.||||+|+..| +
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g-~ 160 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN-Q 160 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT-C
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcC-C
Confidence 53 2 2567899999999999999999999999999999987 7999999999998 8
Q ss_pred hhhHHHHHh---cCCCcccccCCCCCcHHHHHHHcCC---------HHHHHHHHhcCCCCC-------CCCCCCCCHHHH
Q psy9492 151 LDPTRLLIT---FGASTTIQDKIHGNVALHWAIYAKN---------HVAITTLVSHTSSLE-------IPNAQGLTPFML 211 (584)
Q Consensus 151 ~~~~~~Ll~---~ga~~~~~d~~~g~TpLh~A~~~g~---------~~~v~~Ll~~gad~~-------~~n~~g~tpl~l 211 (584)
.+++++|++ .|++++.+|. .|+||||+|+..|+ .+++++|+++|+|++ .+|..|.|||++
T Consensus 161 ~~~v~~Ll~~~~~gad~~~~d~-~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~ 239 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPADISARDS-VGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL 239 (273)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred HHHHHHHHhcccCCCCceeeCC-CCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH
Confidence 999999999 9999999998 99999999999998 899999999999997 499999999999
Q ss_pred HHhcCCCccchHHHHHHHHHHHhc
Q psy9492 212 LEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 212 A~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
|++.++.+ +++.|.+.+..
T Consensus 240 A~~~g~~~-----iv~~Ll~~ga~ 258 (273)
T 2pnn_A 240 AASSGKIG-----VLAYILQREIH 258 (273)
T ss_dssp HHHTTCHH-----HHHHHHHHHTC
T ss_pred HHHhChHH-----HHHHHHHCCCC
Confidence 99999999 99999886553
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=9.2e-31 Score=251.45 Aligned_cols=188 Identities=22% Similarity=0.184 Sum_probs=176.2
Q ss_pred chhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-cccccCCCCCCcHHHHHHHcCCHHHH
Q psy9492 9 NWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGA-IVDAIGGDLQATPLHWATRQGHLDSV 87 (584)
Q Consensus 9 ~~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~g~tpLh~A~~~g~~~~v 87 (584)
+.+......++++.|+++|++++..|..|.||||+|+..|+.+++++|+++++ +++..+ ..|.||||+|+..|+.+++
T Consensus 30 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~ 108 (223)
T 2f8y_A 30 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGML 108 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC-TTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCcHHHHHHHhCcHHHH
Confidence 33445567899999999999999999999999999999999999999999987 666554 4599999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccc
Q psy9492 88 VLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQ 167 (584)
Q Consensus 88 ~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~ 167 (584)
++|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..
T Consensus 109 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~ 187 (223)
T 2f8y_A 109 EDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG-SYETAKVLLDHFANRDIT 187 (223)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT-CHHHHHHHHHTTCCTTCC
T ss_pred HHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcC-CHHHHHHHHHcCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999998 899999999999999999
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy9492 168 DKIHGNVALHWAIYAKNHVAITTLVSHTSSLE 199 (584)
Q Consensus 168 d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 199 (584)
|. .|.||||+|+..|+.+++++|+++|++..
T Consensus 188 ~~-~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 188 DH-MDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CT-TCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred cc-cCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 98 99999999999999999999999999754
No 40
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=6.9e-32 Score=267.51 Aligned_cols=198 Identities=17% Similarity=0.218 Sum_probs=157.3
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccc-------cCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCCCCCCC
Q psy9492 31 NEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDA-------IGGDLQATPLHWATRQGHL-DSVVLLIQHGADPTLMDS 102 (584)
Q Consensus 31 n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~~g~tpLh~A~~~g~~-~~v~~Ll~~gad~~~~d~ 102 (584)
..+|..+.++|+.|+.+|+.++|++|++.|++... ..+..|.||||.|+..++. ++++.|++.|+|++.+|.
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCT
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC
Confidence 34677788999999999999999999999876421 1233488999999988876 478999999999999999
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHc
Q psy9492 103 EGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYA 182 (584)
Q Consensus 103 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~ 182 (584)
+|.||||+|+..|+.+++++|++.|++++.++..|.||+|+|+..+ +.+++++|++.|+++|..|. .|+||||+|+..
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~-~~~~~~~Ll~~g~~~n~~d~-~g~TpL~~A~~~ 162 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQG-HFQVVKCLLDSNAKPNKKDL-SGNTPLIYACSG 162 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT-CHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccC-hHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHC
Confidence 9999999999999999999999999999999999999999999888 89999999999999999998 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 183 KNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 183 g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
|+.+++++|+++|+|++.+|..|.|||++|+..++.+ +++.|.+.+..
T Consensus 163 g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~-----~v~~Ll~~Gad 210 (269)
T 4b93_B 163 GHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF-----VVELLLLHGAS 210 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH-----HHHHHHHTTCC
T ss_pred CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH-----HHHHHHHCCCC
Confidence 9999999999999999999999999999999999999 99999875543
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-31 Score=266.38 Aligned_cols=214 Identities=20% Similarity=0.222 Sum_probs=186.8
Q ss_pred hhhHHHHHHHHHcCCCCCC---------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCH
Q psy9492 14 ELTKVFVGKCVEAGQDVNE---------PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHL 84 (584)
Q Consensus 14 ~~~~~~l~~ll~~g~d~n~---------~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~ 84 (584)
....+.++.++..+.++.. .+.+|.||||.|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~ 86 (299)
T 1s70_B 8 QKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVD-GLTALHQACIDDNV 86 (299)
T ss_dssp HHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTT-CCBHHHHHHHTTCH
T ss_pred HHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCH
Confidence 3456667777776555433 2346679999999999999999999999999987765 99999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHh-cCCC
Q psy9492 85 DSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLIT-FGAS 163 (584)
Q Consensus 85 ~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~-~ga~ 163 (584)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..+ ..++++.++. .|.+
T Consensus 87 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~~~~ll~~~~~~ 165 (299)
T 1s70_B 87 DMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA-MEELLQNEVNRQGVD 165 (299)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH-HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc-hHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999887 6777765554 3444
Q ss_pred ccc--------------------------ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCC
Q psy9492 164 TTI--------------------------QDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIG 217 (584)
Q Consensus 164 ~~~--------------------------~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~ 217 (584)
++. .+. .|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~ 244 (299)
T 1s70_B 166 IEAARKEEERIMLRDARQWLNSGHINDVRHAK-SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT-TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhhhhhhhHHHHHHHHHHhccCcchhhhcC-CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCC
Confidence 432 344 89999999999999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHhc
Q psy9492 218 APWLGKATVDKITELKDH 235 (584)
Q Consensus 218 ~~~l~~~~~~~l~~~~~~ 235 (584)
.+ +++.|.+.+..
T Consensus 245 ~~-----~v~~Ll~~gad 257 (299)
T 1s70_B 245 EE-----ACRILVENLCD 257 (299)
T ss_dssp HH-----HHHHHHHTTCC
T ss_pred HH-----HHHHHHHcCCC
Confidence 98 99999875443
No 42
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=3.7e-32 Score=271.99 Aligned_cols=211 Identities=18% Similarity=0.134 Sum_probs=190.0
Q ss_pred chhhhhhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHH
Q psy9492 9 NWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVV 88 (584)
Q Consensus 9 ~~~~~~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~ 88 (584)
+++......++++.|++.|+++|..| |.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 36 ~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~t~L~~A~~~g~~~~v~ 112 (285)
T 3kea_A 36 YYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDK-GNTALYYAVDSGNMQTVK 112 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCcHHHHHHHcCCHHHHH
Confidence 34445567899999999999999884 899999999999999999999999999987654 999999999999999999
Q ss_pred HHHHCCCCCCCCCCCC-ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccc
Q psy9492 89 LLIQHGADPTLMDSEG-STCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQ 167 (584)
Q Consensus 89 ~Ll~~gad~~~~d~~g-~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~ 167 (584)
+|+++|++++.+|..| .||||.|+..|+.+++++|+++|++.... ..|.||||+|+..| +.+++++|++.|++++..
T Consensus 113 ~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g-~~~~v~~Ll~~gad~n~~ 190 (285)
T 3kea_A 113 LFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNG-HVDMMILLLDYMTSTNTN 190 (285)
T ss_dssp HHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTT-CHHHHHHHHHHHHHTCTT
T ss_pred HHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcC-hHHHHHHHHHcCCCCCcc
Confidence 9999999999999999 89999999999999999999999877332 28999999999998 899999999999999999
Q ss_pred cCCCCCcH-HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhccc
Q psy9492 168 DKIHGNVA-LHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDHYN 237 (584)
Q Consensus 168 d~~~g~Tp-Lh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~~~ 237 (584)
|. .|+|| ||+|+..|+.+++++|+++|+|++.+|. .|+..++.+ +++.|.+.+....
T Consensus 191 ~~-~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~-----iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 191 NS-LLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAE-----IAKMIIEKHVEYK 248 (285)
T ss_dssp CC-CBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHH-----HHHHHHHHHHHHT
T ss_pred cC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHH-----HHHHHHHcCCCCC
Confidence 98 99998 9999999999999999999999999984 345677777 8899888555443
No 43
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=1.4e-30 Score=266.87 Aligned_cols=198 Identities=24% Similarity=0.260 Sum_probs=176.6
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccC---------CCCCCcHHHHHHHcCCHHHHHHHHH-CCCCC
Q psy9492 28 QDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIG---------GDLQATPLHWATRQGHLDSVVLLIQ-HGADP 97 (584)
Q Consensus 28 ~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~---------~~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~ 97 (584)
.+++..|..|.||||+|+..|+.+++++|+++|++++... +..|.||||+|+..|+.+++++|++ .|+++
T Consensus 116 ~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~ 195 (337)
T 4g8k_A 116 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV 195 (337)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT
T ss_pred chhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc
Confidence 3455677889999999999999999999999999987543 2348999999999999999999996 69999
Q ss_pred CCCCCCCChHHHHHHHhCC----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhc-CCCcccccCCCC
Q psy9492 98 TLMDSEGSTCIHQAAQFGH----TRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITF-GASTTIQDKIHG 172 (584)
Q Consensus 98 ~~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~-ga~~~~~d~~~g 172 (584)
+.+|..|.|+++.++..++ ..++++|+++|++++.+|..|.||||+|+..| ..++++.|++. |+++|.+|. .|
T Consensus 196 n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~-~~~~v~~Ll~~~~~~vn~~d~-~G 273 (337)
T 4g8k_A 196 NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK-HLGLVQRLLEQEHIEINDTDS-DG 273 (337)
T ss_dssp TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT-CHHHHHHHHTSTTCCTTCBCT-TS
T ss_pred CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhh-hhHHHHHHHHhcCCcccCcCC-CC
Confidence 9999999999998876654 46889999999999999999999999999988 79999999885 899999998 99
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhccc
Q psy9492 173 NVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDHYN 237 (584)
Q Consensus 173 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~~~ 237 (584)
+||||+|+..|+.++|++|+++|||++.+ +||+.|+++++.+ ++++|.+.++..+
T Consensus 274 ~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~-----iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 274 KTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHS-----LVKVLLSHGAKED 328 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHH-----HHHHHHHTTCCC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHH-----HHHHHHHCcCCCC
Confidence 99999999999999999999999999765 5999999999998 9999988665543
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.9e-31 Score=242.85 Aligned_cols=155 Identities=31% Similarity=0.430 Sum_probs=148.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChh
Q psy9492 73 TPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLD 152 (584)
Q Consensus 73 tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~ 152 (584)
++|+.||+.|+.++|+.|+++|+|++.+|..|.||+|.|+..++.+++++|+++|++++.+|..|.||||+|+..| +.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g-~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG-HKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcC-CHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999998 899
Q ss_pred hHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHH
Q psy9492 153 PTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITEL 232 (584)
Q Consensus 153 ~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~ 232 (584)
++++|++.|+++|.+|. .|+||||+|+..|+.+++++|+++|+|++.+|.+|+|||++|++.++.+ ++++|.+.
T Consensus 85 ~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~-----iv~~Ll~~ 158 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDS-DGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE-----VVKLLEKQ 158 (169)
T ss_dssp HHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-----HHHHHHTC
T ss_pred HHHHHHHCcCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH-----HHHHHHHC
Confidence 99999999999999998 9999999999999999999999999999999999999999999999998 89988764
Q ss_pred Hh
Q psy9492 233 KD 234 (584)
Q Consensus 233 ~~ 234 (584)
++
T Consensus 159 GA 160 (169)
T 4gpm_A 159 GG 160 (169)
T ss_dssp --
T ss_pred CC
Confidence 44
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-31 Score=279.24 Aligned_cols=201 Identities=30% Similarity=0.399 Sum_probs=185.5
Q ss_pred CCCCCCC-CCCCcHHHHHHHcCCHHHHHHHH--------HCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9492 28 QDVNEPD-SETVTLLHWAAINNRIEIMKYFI--------SQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98 (584)
Q Consensus 28 ~d~n~~d-~~g~t~Lh~A~~~~~~~~v~~Ll--------~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~ 98 (584)
.++|..| ..|.||||+|+.+|+.+++++|+ +.|+++|..+.. |.||||+|+..|+.+++++|+++|++++
T Consensus 115 ~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~ga~~~ 193 (373)
T 2fo1_E 115 ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD-ENTPLMLAVLARRRRLVAYLMKAGADPT 193 (373)
T ss_dssp TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCC-CCCHHHHHHHcChHHHHHHHHHCCCCCc
Confidence 5778888 79999999999999988877776 899999987755 9999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHhhcC--ChhhHHHHHhcCCCccc-------
Q psy9492 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAKG---INVNLQDRNGMTALMWSAYKVF--SLDPTRLLITFGASTTI------- 166 (584)
Q Consensus 99 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~d~~g~t~Lh~Aa~~~~--~~~~~~~Ll~~ga~~~~------- 166 (584)
.+|..|.||||.|+..|+.+++++|+++| ++++..|..|.||||+|+..+. ..+++++|++.|++++.
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 273 (373)
T 2fo1_E 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273 (373)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC
Confidence 99999999999999999999999999997 8999999999999999998764 68999999999999986
Q ss_pred -ccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 167 -QDKIHGNVALHWAIYAKNHVAITTLVSHT-SSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 167 -~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
.|. .|.||||+|+..|+.+++++|+++| +|++.+|..|.|||++|+..++.+ +++.|.+.+..
T Consensus 274 ~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~-----iv~~Ll~~gad 338 (373)
T 2fo1_E 274 SEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-----VVMYLIQQGAS 338 (373)
T ss_dssp SSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH-----HHHHHHHTTCC
T ss_pred cccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHH-----HHHHHHHcCCC
Confidence 455 8999999999999999999999886 999999999999999999999998 99999875443
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.4e-32 Score=266.79 Aligned_cols=195 Identities=27% Similarity=0.262 Sum_probs=176.8
Q ss_pred HHHHHHHHH----cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy9492 17 KVFVGKCVE----AGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQ 92 (584)
Q Consensus 17 ~~~l~~ll~----~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 92 (584)
.++++.|++ .|+++|..|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 21 ~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~ 99 (236)
T 1ikn_D 21 KALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFR-GNTPLHLACEQGCLASVGVLTQ 99 (236)
T ss_dssp SSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTT-CCCHHHHHHHHTCHHHHHHHHH
T ss_pred hhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHh
Confidence 344444544 45589999999999999999999999999999999999987655 9999999999999999999999
Q ss_pred CCCC------CCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHhhcCChhhHHHHHhcCCCcc
Q psy9492 93 HGAD------PTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDR-NGMTALMWSAYKVFSLDPTRLLITFGASTT 165 (584)
Q Consensus 93 ~gad------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~ 165 (584)
+|++ ++..|..|.||||.|+..|+.+++++|+++|++++.+|. .|.||||+|+..| +.+++++|++.|++++
T Consensus 100 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~-~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 100 SCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ-NPDLVSLLLKCGADVN 178 (236)
T ss_dssp STTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT-CHHHHHHHHTTTCCSC
T ss_pred cccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCC
Confidence 9976 466788999999999999999999999999999999998 9999999999988 8999999999999999
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCHHHHHHh
Q psy9492 166 IQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLE--IPNAQGLTPFMLLEE 214 (584)
Q Consensus 166 ~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~--~~n~~g~tpl~lA~~ 214 (584)
..|. .|.||||+|+..|+.+++++|+++|++.. .++.+|.||.+.+.+
T Consensus 179 ~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 179 RVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CCCT-TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred cccC-CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 9998 99999999999999999999999999876 889999998876544
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.2e-30 Score=244.60 Aligned_cols=182 Identities=25% Similarity=0.299 Sum_probs=169.2
Q ss_pred hhhhhHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 12 EFELTKVFVGKCVEAGQ-DVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLL 90 (584)
Q Consensus 12 ~~~~~~~~l~~ll~~g~-d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 90 (584)
......+.++.+++.+. ++|..|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|
T Consensus 13 ~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~L 91 (201)
T 3hra_A 13 ANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI-SDSPYLYAGAQGRTEILAYM 91 (201)
T ss_dssp HHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHH
T ss_pred HHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHH
Confidence 34556778888888764 99999999999999999999999999999999999987655 99999999999999999999
Q ss_pred H-HCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhhcCC----hhhHHHHHhcCCCc
Q psy9492 91 I-QHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKG-INVNLQDRNGMTALMWSAYKVFS----LDPTRLLITFGAST 164 (584)
Q Consensus 91 l-~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~Lh~Aa~~~~~----~~~~~~Ll~~ga~~ 164 (584)
+ +.+++++.+|..|.||||.|++.|+.+++++|+++| ++++.+|..|.||||+|+..+.. .+++++|++.|+++
T Consensus 92 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 92 LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp HHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred HhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 9 667899999999999999999999999999999998 99999999999999999988731 89999999999999
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 165 TIQDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 165 ~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
+..|. .|+||||+|+..|+.+++++|+++|
T Consensus 172 ~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 172 SIKDN-SGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TCCCT-TSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CccCC-CCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99998 9999999999999999999999987
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.1e-31 Score=261.90 Aligned_cols=185 Identities=19% Similarity=0.120 Sum_probs=169.0
Q ss_pred hhhhHHHHHHHHHcCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCcccccC----------CCCCCcHH
Q psy9492 13 FELTKVFVGKCVEAGQDVNE----PDSETVTLLHWAAIN---NRIEIMKYFISQGAIVDAIG----------GDLQATPL 75 (584)
Q Consensus 13 ~~~~~~~l~~ll~~g~d~n~----~d~~g~t~Lh~A~~~---~~~~~v~~Ll~~g~~~~~~~----------~~~g~tpL 75 (584)
.+..+.+++.+++.|+++|. +|.+|.||||+|+.. |+.+++++|+++|++++... +..|.|||
T Consensus 15 ~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L 94 (256)
T 2etb_A 15 PEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSAL 94 (256)
T ss_dssp GGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHH
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHH
Confidence 34445688889999999999 899999999999999 99999999999998876433 24599999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCCc
Q psy9492 76 HWATRQGHLDSVVLLIQHGADPTLMDSE-------------GSTCIHQAAQFGHTRIVAYLVA---KGINVNLQDRNGMT 139 (584)
Q Consensus 76 h~A~~~g~~~~v~~Ll~~gad~~~~d~~-------------g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~d~~g~t 139 (584)
|+|+..|+.+++++|+++|++++.+|.. |.||||.|+..|+.+++++|++ +|++++.+|..|.|
T Consensus 95 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~T 174 (256)
T 2etb_A 95 HIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNT 174 (256)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCC
Confidence 9999999999999999999999999887 9999999999999999999999 99999999999999
Q ss_pred HHHHHHh--hcCChh-------hHHHHHhcCCCc-------ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy9492 140 ALMWSAY--KVFSLD-------PTRLLITFGAST-------TIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLE 199 (584)
Q Consensus 140 ~Lh~Aa~--~~~~~~-------~~~~Ll~~ga~~-------~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 199 (584)
|||+|+. .+ +.+ ++++|++.|+++ +.+|. .|+||||+|+..|+.+++++|+++|++..
T Consensus 175 pLh~A~~~~~~-~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 175 VLHALVMIADN-SPENSALVIHMYDGLLQMGARLCPTVQLEEISNH-QGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccC-CchhhHHHHHHHHHHHHcCCCcccccccccccCC-CCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 9999998 44 666 999999999999 88998 99999999999999999999999987643
No 49
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=2.9e-31 Score=274.92 Aligned_cols=200 Identities=24% Similarity=0.251 Sum_probs=180.6
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCh
Q psy9492 27 GQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGST 106 (584)
Q Consensus 27 g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 106 (584)
+.+++..|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++. ..|.|
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t 86 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRF-GCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQK 86 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBC
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCC
Confidence 5778889999999999999999999999999999999987765 99999999999999999999999996654 57999
Q ss_pred HHHHHHHhCCHHHHHHHHHC----CCCCCC-----------------CCCCCCcHHHHHHhhcC-ChhhHHHHHhcCCCc
Q psy9492 107 CIHQAAQFGHTRIVAYLVAK----GINVNL-----------------QDRNGMTALMWSAYKVF-SLDPTRLLITFGAST 164 (584)
Q Consensus 107 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~-----------------~d~~g~t~Lh~Aa~~~~-~~~~~~~Ll~~ga~~ 164 (584)
|||.|+..|+.+++++|++. |.+++. .|..|.||||+|+..|. +.+++++|++.|+++
T Consensus 87 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~ 166 (364)
T 3ljn_A 87 PIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP 166 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT
T ss_pred HHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC
Confidence 99999999999999999998 888776 88899999999998763 589999999999999
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-----CCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 165 TIQDKIHGNVALHWAIYAKNHVAITTLVSHTSS-----LEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 165 ~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad-----~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
+..|. .|.||||+|+..|+.+++++|+++|++ ++.+|..|.|||++|+..++.+ +++.|.+.+..
T Consensus 167 ~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~-----~v~~Ll~~gad 236 (364)
T 3ljn_A 167 TAKDK-ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED-----VAMRFVEMGID 236 (364)
T ss_dssp TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHH-----HHHHHHTTTCC
T ss_pred cccCC-CCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHH-----HHHHHHHcCCC
Confidence 99998 999999999999999999999999999 9999999999999999999998 99998875433
No 50
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.5e-30 Score=239.68 Aligned_cols=169 Identities=24% Similarity=0.366 Sum_probs=153.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCc-ccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 37 TVTLLHWAAINNRIEIMKYFISQGAI-VDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
+.+|||.|+..|+.++++.|++++.+ ++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC
Confidence 46899999999999999999999988 55444 55999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 116 HTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|+++|
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN-HVKCVEALLARGADLTTEAD-SGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 999999999999999999999999999999988 89999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCCH
Q psy9492 196 SSLEIPNAQGLTP 208 (584)
Q Consensus 196 ad~~~~n~~g~tp 208 (584)
+++..+|..|.||
T Consensus 159 ~~~~~~~~~~~~p 171 (172)
T 3v30_A 159 LKLFQSNLVPADP 171 (172)
T ss_dssp HHHSCC-------
T ss_pred HHHhcccCCCCCC
Confidence 9999999999987
No 51
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=8.5e-30 Score=246.86 Aligned_cols=199 Identities=21% Similarity=0.234 Sum_probs=184.0
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChH
Q psy9492 29 DVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMD-SEGSTC 107 (584)
Q Consensus 29 d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~t~ 107 (584)
+++..|..|.++||.|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++..+ ..|.||
T Consensus 1 h~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 79 (240)
T 3eu9_A 1 HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKE-NVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTP 79 (240)
T ss_dssp -CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCH
T ss_pred CccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCC-CCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCCh
Confidence 35677899999999999999999999999999999887655 9999999999999999999999999988654 459999
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCC-HH
Q psy9492 108 IHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKN-HV 186 (584)
Q Consensus 108 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~-~~ 186 (584)
||.|+..|+.+++++|++.|++++.+|..|.||||+|+..| +.+++++|++.|++++..|. .|.||||+|+..++ .+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG-HTSIVAYLIAKGQDVDMMDQ-NGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCCSST
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC-HHHHHHHHHhcCCCccccCC-CCCcHHHHHHHhCChHH
Confidence 99999999999999999999999999999999999999988 89999999999999999998 99999999997776 89
Q ss_pred HHHHHHhcCCCCCCCCC-CCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 187 AITTLVSHTSSLEIPNA-QGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 187 ~v~~Ll~~gad~~~~n~-~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
++++|++.|++++..+. .|.|||++|+..++.+ +++.|.+.+..
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-----~v~~Ll~~g~~ 202 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT-----VISLLLEAGAN 202 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH-----HHHHHHHHTCC
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH-----HHHHHHHcCCC
Confidence 99999999999999997 9999999999999998 88888875433
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=7.7e-31 Score=258.39 Aligned_cols=196 Identities=19% Similarity=0.165 Sum_probs=168.2
Q ss_pred CCCCCcHHHHHHHcCCHHH----HHHHHHCCCcccccC---CCCCCcHHHHHH---HcCCHHHHHHHHHCCCC-------
Q psy9492 34 DSETVTLLHWAAINNRIEI----MKYFISQGAIVDAIG---GDLQATPLHWAT---RQGHLDSVVLLIQHGAD------- 96 (584)
Q Consensus 34 d~~g~t~Lh~A~~~~~~~~----v~~Ll~~g~~~~~~~---~~~g~tpLh~A~---~~g~~~~v~~Ll~~gad------- 96 (584)
+..|.++||.|+..|+.+. +++|++.|++++..+ +..|.||||+|+ ..|+.+++++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 4567899999999999995 455555888887554 245899999999 67999999999998754
Q ss_pred ----CCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHhhcCChhhHHHHH
Q psy9492 97 ----PTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQD--------------RNGMTALMWSAYKVFSLDPTRLLI 158 (584)
Q Consensus 97 ----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d--------------~~g~t~Lh~Aa~~~~~~~~~~~Ll 158 (584)
.+..|..|.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+..| +.+++++|+
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g-~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN-QPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT-CHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC-CHHHHHHHH
Confidence 34455689999999999999999999999999999988 57999999999888 799999999
Q ss_pred h---cCCCcccccCCCCCcHHHHHHHcCC---------HHHHHHHHhcCCCC-------CCCCCCCCCHHHHHHhcCCCc
Q psy9492 159 T---FGASTTIQDKIHGNVALHWAIYAKN---------HVAITTLVSHTSSL-------EIPNAQGLTPFMLLEENIGAP 219 (584)
Q Consensus 159 ~---~ga~~~~~d~~~g~TpLh~A~~~g~---------~~~v~~Ll~~gad~-------~~~n~~g~tpl~lA~~~~~~~ 219 (584)
+ .|++++.+|. .|+||||+|+..|+ .+++++|+++|+|+ +.+|..|.|||++|++.++.+
T Consensus 161 ~~~~~ga~~~~~d~-~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 161 ENGHKQADLRRQDS-RGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp HCSSCCCCTTCCCT-TSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred hccccCCCCcccCC-CCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHH
Confidence 9 8999999998 99999999998887 78999999999988 679999999999999999998
Q ss_pred cchHHHHHHHHHHHhcc
Q psy9492 220 WLGKATVDKITELKDHY 236 (584)
Q Consensus 220 ~l~~~~~~~l~~~~~~~ 236 (584)
+++.|.+.....
T Consensus 240 -----~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 240 -----IFQHIIRREIAD 251 (260)
T ss_dssp -----HHHHHHHHHHHH
T ss_pred -----HHHHHHHhCCCc
Confidence 888888755443
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.5e-30 Score=258.47 Aligned_cols=195 Identities=16% Similarity=0.142 Sum_probs=161.4
Q ss_pred hhhHHHHHHHHHcCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCcc-------ccc---CCCCCCcHHH
Q psy9492 14 ELTKVFVGKCVEAGQDVN----EPDSETVTLLHWAAIN---NRIEIMKYFISQGAIV-------DAI---GGDLQATPLH 76 (584)
Q Consensus 14 ~~~~~~l~~ll~~g~d~n----~~d~~g~t~Lh~A~~~---~~~~~v~~Ll~~g~~~-------~~~---~~~~g~tpLh 76 (584)
+..+.+++...+.+.+++ ..|..|.||||+|+.. |+.+++++|+++|+++ +.. .+..|.||||
T Consensus 27 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~ 106 (273)
T 2pnn_A 27 QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALH 106 (273)
T ss_dssp STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHH
T ss_pred HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHH
Confidence 334455566666888887 4689999999999987 9999999999998763 221 2235999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCC--------------CCChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCCc
Q psy9492 77 WATRQGHLDSVVLLIQHGADPTLMDS--------------EGSTCIHQAAQFGHTRIVAYLVA---KGINVNLQDRNGMT 139 (584)
Q Consensus 77 ~A~~~g~~~~v~~Ll~~gad~~~~d~--------------~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~d~~g~t 139 (584)
+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++ .|++++.+|..|.|
T Consensus 107 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~t 186 (273)
T 2pnn_A 107 IAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNT 186 (273)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCC
T ss_pred HHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCc
Confidence 99999999999999999999999987 79999999999999999999999 99999999999999
Q ss_pred HHHHHHhhcCC--------hhhHHHHHhcCCCccc-------ccCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CCCCCCC
Q psy9492 140 ALMWSAYKVFS--------LDPTRLLITFGASTTI-------QDKIHGNVALHWAIYAKNHVAITTLVSHTS-SLEIPNA 203 (584)
Q Consensus 140 ~Lh~Aa~~~~~--------~~~~~~Ll~~ga~~~~-------~d~~~g~TpLh~A~~~g~~~~v~~Ll~~ga-d~~~~n~ 203 (584)
|||+|+..+.. .+++++|++.|+++|. .|. .|+||||+|+..|+.+++++|+++|| |+.....
T Consensus 187 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~ 265 (273)
T 2pnn_A 187 VLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR-KGLTPLALAASSGKIGVLAYILQREIHEPECRHA 265 (273)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHTC-------
T ss_pred HHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC-CCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhh
Confidence 99999988732 6899999999999974 787 99999999999999999999999999 8888877
Q ss_pred CCCCHH
Q psy9492 204 QGLTPF 209 (584)
Q Consensus 204 ~g~tpl 209 (584)
.+.+|-
T Consensus 266 ~~~~~~ 271 (273)
T 2pnn_A 266 AAHHHH 271 (273)
T ss_dssp ------
T ss_pred hhhhcc
Confidence 777664
No 54
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=4e-30 Score=241.31 Aligned_cols=163 Identities=21% Similarity=0.219 Sum_probs=146.3
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHH
Q psy9492 30 VNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIH 109 (584)
Q Consensus 30 ~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~ 109 (584)
+|.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIE-GSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccccc-CccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 5778889999999999999999999999999888876655 889999999999999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHH
Q psy9492 110 QAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAIT 189 (584)
Q Consensus 110 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~ 189 (584)
.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..|. .|.||||+|+..|+.++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG-RSEIVKKLLELGADISARDL-TGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT-CHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhCcHHHHH
Confidence 999999999999999999999999999999999999888 78999999999999998887 8999999999999999999
Q ss_pred HHHhcC
Q psy9492 190 TLVSHT 195 (584)
Q Consensus 190 ~Ll~~g 195 (584)
+|+++|
T Consensus 185 ~Ll~~~ 190 (192)
T 2rfm_A 185 IFTEVR 190 (192)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 998765
No 55
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.1e-29 Score=231.12 Aligned_cols=159 Identities=23% Similarity=0.264 Sum_probs=147.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHh
Q psy9492 35 SETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQF 114 (584)
Q Consensus 35 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~ 114 (584)
+...||||.|+..|+.+++++|+++|++++..+.. |.||||+|+. |+.+++++|+++|++++.+|..|.||||.|++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTT-SCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCcc-CccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 34569999999999999999999999999877655 9999999999 999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy9492 115 GHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGAS-TTIQDKIHGNVALHWAIYAKNHVAITTLVS 193 (584)
Q Consensus 115 g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~-~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~ 193 (584)
|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++ ++..|. .|.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG-HLRVVEFLVKHTASNVGHRNH-KGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHHccCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999988 89999999999998 588887 99999999999999999999999
Q ss_pred cCCC
Q psy9492 194 HTSS 197 (584)
Q Consensus 194 ~gad 197 (584)
+|||
T Consensus 159 ~GAd 162 (162)
T 1ihb_A 159 NGAG 162 (162)
T ss_dssp TC--
T ss_pred hCCC
Confidence 9986
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.7e-29 Score=231.44 Aligned_cols=160 Identities=26% Similarity=0.386 Sum_probs=124.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
+|.||||.|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEE-GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 4677888888888888888888777777766544 778888888888888888888888887777777888888888888
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 116 HTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|++++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN-HVKCVKMLLESGADPTIETD-SGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 888888888878777777777888888777776 67777888877777777776 7778888888888888888777776
Q ss_pred CCC
Q psy9492 196 SSL 198 (584)
Q Consensus 196 ad~ 198 (584)
++.
T Consensus 159 ~~~ 161 (167)
T 3v31_A 159 LKL 161 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=254.80 Aligned_cols=187 Identities=17% Similarity=0.191 Sum_probs=173.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCc--ccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCChHHHHHH-
Q psy9492 37 TVTLLHWAAINNRIEIMKYFISQGAI--VDAIGGDLQATPLHWATRQGHLDSVVLLIQHGA-DPTLMDSEGSTCIHQAA- 112 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga-d~~~~d~~g~t~L~~A~- 112 (584)
+.+++|.|+..++.+.++.+++.+.+ +|..+.. |.||||+|+..|+.+++++|++.|+ +++.+|..|.||||.|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~-g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSN-GNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 45778899999999999999987766 6666554 9999999999999999999999998 99999999999999999
Q ss_pred ----HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHH
Q psy9492 113 ----QFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAI 188 (584)
Q Consensus 113 ----~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v 188 (584)
..++.+++++|++.|.+.+..|..|.||||+|+..| +.+++++|++.|+++|.+|. .|+||||+|+..|+.+++
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g-~~~~v~~Ll~~gad~n~~d~-~G~TpLh~A~~~g~~~iv 232 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHG-RVDVVKALLACEADVNVQDD-DGSTALMCACEHGHKEIA 232 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred HHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC-CHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCCCHHHH
Confidence 678899999999999999999999999999999998 89999999999999999998 999999999999999999
Q ss_pred HHHHh-cCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHH
Q psy9492 189 TTLVS-HTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231 (584)
Q Consensus 189 ~~Ll~-~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~ 231 (584)
++|++ .|+|++.+|..|.||+++|+..++.+ +++.|.+
T Consensus 233 ~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~-----iv~~Ll~ 271 (276)
T 4hbd_A 233 GLLLAVPSCDISLTDRDGSTALMVALDAGQSE-----IASMLYS 271 (276)
T ss_dssp HHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHH-----HHHHHHH
T ss_pred HHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHH-----HHHHHHh
Confidence 99999 89999999999999999999999998 8888865
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=4.9e-29 Score=228.97 Aligned_cols=159 Identities=33% Similarity=0.401 Sum_probs=133.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q psy9492 34 DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQ 113 (584)
Q Consensus 34 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~ 113 (584)
...+.++||.|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDAS-GWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 345667888888888888888888888888876554 8888888888888888888888888888888888888888888
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy9492 114 FGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVS 193 (584)
Q Consensus 114 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~ 193 (584)
.|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|++
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG-HLEIVEVLLKNGADVNAQDK-FGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhCCHHHHHHHHH
Confidence 88888888888888888888888888888888877 78888888888888888887 88888888888888888888887
Q ss_pred cC
Q psy9492 194 HT 195 (584)
Q Consensus 194 ~g 195 (584)
.|
T Consensus 168 ~G 169 (169)
T 2y1l_E 168 LN 169 (169)
T ss_dssp C-
T ss_pred cC
Confidence 75
No 59
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=7.7e-30 Score=251.22 Aligned_cols=186 Identities=18% Similarity=0.098 Sum_probs=164.2
Q ss_pred hhhhHHHHHHHHHcCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHHCCCcccc---------c-CCCCCCcHH
Q psy9492 13 FELTKVFVGKCVEAGQDVNEPD----SETVTLLHWAA---INNRIEIMKYFISQGAIVDA---------I-GGDLQATPL 75 (584)
Q Consensus 13 ~~~~~~~l~~ll~~g~d~n~~d----~~g~t~Lh~A~---~~~~~~~v~~Ll~~g~~~~~---------~-~~~~g~tpL 75 (584)
.+..+.+++.+++.|.+++..+ ..|.||||+|+ ..|+.+++++|++.|++.+. . .+..|.|||
T Consensus 18 ~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L 97 (260)
T 3jxi_A 18 PDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTAL 97 (260)
T ss_dssp GGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHH
T ss_pred HHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHH
Confidence 3445557778888999999766 77999999999 67999999999998865321 1 122589999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCC--------------CCCChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCC
Q psy9492 76 HWATRQGHLDSVVLLIQHGADPTLMD--------------SEGSTCIHQAAQFGHTRIVAYLVA---KGINVNLQDRNGM 138 (584)
Q Consensus 76 h~A~~~g~~~~v~~Ll~~gad~~~~d--------------~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~d~~g~ 138 (584)
|+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|+.+++++|++ +|++++.+|..|.
T Consensus 98 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~ 177 (260)
T 3jxi_A 98 HIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN 177 (260)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCC
Confidence 99999999999999999999999998 689999999999999999999999 9999999999999
Q ss_pred cHHHHHHhhcCC--------hhhHHHHHhcCCCc-------ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy9492 139 TALMWSAYKVFS--------LDPTRLLITFGAST-------TIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLE 199 (584)
Q Consensus 139 t~Lh~Aa~~~~~--------~~~~~~Ll~~ga~~-------~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 199 (584)
||||+|+..+.. .+++++|++.|+++ +..|. .|+||||+|+..|+.+++++|+++|++..
T Consensus 178 TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 178 TVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN-DGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC-CCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 999999987732 58999999999999 67887 99999999999999999999999997654
No 60
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=5.5e-29 Score=230.84 Aligned_cols=168 Identities=20% Similarity=0.253 Sum_probs=154.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC-CCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q psy9492 35 SETVTLLHWAAINNRIEIMKYFISQ-GAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQ 113 (584)
Q Consensus 35 ~~g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~ 113 (584)
.++.++||.|+..|+.+++++|+++ +.+++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 4678999999999999999999998 556666554 49999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy9492 114 FGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVS 193 (584)
Q Consensus 114 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~ 193 (584)
.|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|.||||+|+..++.+++++|++
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG-QDQVAEDLVANGALVSICNK-YGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCSSBCCT-TSCCGGGGSCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCcchhcc-CCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988 79999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCCC
Q psy9492 194 HTSSLEIPNAQG 205 (584)
Q Consensus 194 ~gad~~~~n~~g 205 (584)
+|++++..+.++
T Consensus 160 ~g~~~~~~~~~~ 171 (179)
T 3f6q_A 160 MGQNLNRIPYKD 171 (179)
T ss_dssp TTCCCSCBCCCC
T ss_pred hhcCcccCCccc
Confidence 999999877655
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=6.2e-29 Score=233.21 Aligned_cols=162 Identities=23% Similarity=0.226 Sum_probs=154.0
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy9492 64 DAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMW 143 (584)
Q Consensus 64 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~ 143 (584)
|.++ ..|.||||+|+..|+.++++.|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 29 n~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 29 NYRD-SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp TCCC-TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred hCcC-CCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 3344 449999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchH
Q psy9492 144 SAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGK 223 (584)
Q Consensus 144 Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~ 223 (584)
|+..+ +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+
T Consensus 108 A~~~~-~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~---- 181 (192)
T 2rfm_A 108 SIIFG-YSEMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE---- 181 (192)
T ss_dssp HHHHT-CHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH----
T ss_pred HHHcC-CHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH----
Confidence 99988 89999999999999999998 9999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH
Q psy9492 224 ATVDKITELK 233 (584)
Q Consensus 224 ~~~~~l~~~~ 233 (584)
+++.|.+.+
T Consensus 182 -~v~~Ll~~~ 190 (192)
T 2rfm_A 182 -VIKIFTEVR 190 (192)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHhcc
Confidence 888887744
No 62
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=248.76 Aligned_cols=177 Identities=24% Similarity=0.304 Sum_probs=162.6
Q ss_pred hHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-cccccCCCCCCcHHHHHH-----HcCCHHHH
Q psy9492 16 TKVFVGKCVEAGQD--VNEPDSETVTLLHWAAINNRIEIMKYFISQGA-IVDAIGGDLQATPLHWAT-----RQGHLDSV 87 (584)
Q Consensus 16 ~~~~l~~ll~~g~d--~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~g~tpLh~A~-----~~g~~~~v 87 (584)
..+.++.+++.+.+ +|..|.+|.||||+|+..|+.+++++|++.|+ +++..+.. |.||||+|+ ..++.+++
T Consensus 88 ~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-g~tpL~~a~~~~~~~~~~~~~v 166 (276)
T 4hbd_A 88 HLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRA-GYSPIMLTALATLKTQDDIETV 166 (276)
T ss_dssp HHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTT-SCCHHHHGGGCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCC-CCCHHHHHHHHHhhhhhhHHHH
Confidence 34445555555544 89999999999999999999999999999998 77776554 999999999 66889999
Q ss_pred HHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHh-cCCCccc
Q psy9492 88 VLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLIT-FGASTTI 166 (584)
Q Consensus 88 ~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~-~ga~~~~ 166 (584)
+.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++ .|++++.
T Consensus 167 ~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g-~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 167 LQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG-HKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp HHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-CHHHHHHHHTSTTCCTTC
T ss_pred HHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC-CHHHHHHHHhcCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999998 8999999999 8999999
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 167 QDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 167 ~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
.|. .|+||||+|+..|+.+++++|++++
T Consensus 246 ~d~-~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 TDR-DGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCT-TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 998 9999999999999999999999875
No 63
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.8e-31 Score=258.04 Aligned_cols=199 Identities=18% Similarity=0.101 Sum_probs=171.2
Q ss_pred HHHHHHcCCCCCCCC---CCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy9492 20 VGKCVEAGQDVNEPD---SETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGAD 96 (584)
Q Consensus 20 l~~ll~~g~d~n~~d---~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad 96 (584)
++.|+++|++++..+ .+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEE-GITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 467889999887654 46677899999999999999999999999987655 99999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHH--HhhcCChhhHHHHHhcCCCcccccCCCCC
Q psy9492 97 PTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQD-RNGMTALMWS--AYKVFSLDPTRLLITFGASTTIQDKIHGN 173 (584)
Q Consensus 97 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~Lh~A--a~~~~~~~~~~~Ll~~ga~~~~~d~~~g~ 173 (584)
++.+|..|.||||+|+..|+.+++++|+++|++++.+| ..|.||||+| +..| +.+++++|++.|++++..|. .|.
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~-~~~~v~~Ll~~ga~~~~~~~-~~~ 157 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREG-YADCATYLADVEQSMGLMNS-GAV 157 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTT-HHHHHHHHHHHHHHTTTSGG-GEE
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcC-hHHHHHHHHHcCCCcccccC-Cch
Confidence 99999999999999999999999999999999999997 5999999999 7777 89999999999999999998 999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHhcCCCccchHH
Q psy9492 174 VALHWAIYAKNHVAITTLVSHTSS--LEIPNAQGLTPFMLLEENIGAPWLGKA 224 (584)
Q Consensus 174 TpLh~A~~~g~~~~v~~Ll~~gad--~~~~n~~g~tpl~lA~~~~~~~~l~~~ 224 (584)
||+|.++..+. .+.|++.|++ ++.+|..|.|||++|+..++.+.+++.
T Consensus 158 ~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 158 YALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp EESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred HHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 99996655543 3678899998 778999999999999999998844443
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=2.4e-28 Score=223.68 Aligned_cols=158 Identities=19% Similarity=0.198 Sum_probs=151.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
.|.||||.|+..|+.++++.|++.|++++.+|..|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG- 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT-
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC-
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHH
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKI 229 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l 229 (584)
+.+++++|++.|++++..|. .|.||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+ +++.|
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~-----~~~~L 154 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS-----VQQVI 154 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-----HHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHH-----HHHHH
Confidence 89999999999999999998 9999999999999999999999999999999999999999999999998 88888
Q ss_pred HHHHh
Q psy9492 230 TELKD 234 (584)
Q Consensus 230 ~~~~~ 234 (584)
.+...
T Consensus 155 ~~~~~ 159 (167)
T 3v31_A 155 ESHLL 159 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77443
No 65
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=3.7e-28 Score=219.14 Aligned_cols=150 Identities=29% Similarity=0.365 Sum_probs=114.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCH
Q psy9492 38 VTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHT 117 (584)
Q Consensus 38 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~ 117 (584)
.++||.|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFTT--DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCCC--CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 4677778887888888877777776652 34477788888777777777777777777777777777777777777777
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 118 RIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTL 191 (584)
Q Consensus 118 ~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~L 191 (584)
+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++.+|. .|.||||+|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHN-HQEVVELLIKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHh
Confidence 7777777777777777777777777777766 67777777777777777776 777777777777777777765
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=5.1e-28 Score=222.17 Aligned_cols=155 Identities=28% Similarity=0.343 Sum_probs=149.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
.+.+|||.|++.|+.+++++|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 91 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG- 91 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHH
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKI 229 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l 229 (584)
+.+++++|++.|++++..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|++.++.+ +++.|
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~-----~~~~L 165 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDM-EGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED-----LAEIL 165 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-----HHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHH-----HHHHH
Confidence 89999999999999999998 9999999999999999999999999999999999999999999999988 88877
Q ss_pred HH
Q psy9492 230 TE 231 (584)
Q Consensus 230 ~~ 231 (584)
.+
T Consensus 166 ~~ 167 (169)
T 2y1l_E 166 QK 167 (169)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.8e-28 Score=224.11 Aligned_cols=160 Identities=29% Similarity=0.340 Sum_probs=140.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCC-CcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy9492 33 PDSETVTLLHWAAINNRIEIMKYFISQG-AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQA 111 (584)
Q Consensus 33 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A 111 (584)
.|.+|.++||.|+..|+.++++.|++.+ .+++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccc-cCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 3577889999999999999999999854 4444444 4488999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy9492 112 AQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTL 191 (584)
Q Consensus 112 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~L 191 (584)
+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..|. .|+||||+|+. |+.+++++|
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG-KYEICKLLLQHGADPTKKNR-DGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCTGGGSCT-TCHHHHHHH
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCCcccCC-CCCChhHhHhc-CChHHHHHH
Confidence 9999999999999999999999999999999999888 89999999999999999998 99999999776 889999999
Q ss_pred HhcCC
Q psy9492 192 VSHTS 196 (584)
Q Consensus 192 l~~ga 196 (584)
+++||
T Consensus 160 ~~~gA 164 (165)
T 3twr_A 160 RGDAA 164 (165)
T ss_dssp HTC--
T ss_pred hhccc
Confidence 98886
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.1e-29 Score=245.20 Aligned_cols=180 Identities=23% Similarity=0.190 Sum_probs=135.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q psy9492 34 DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQ 113 (584)
Q Consensus 34 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~ 113 (584)
+..|.||||.|+..++.+.++.|+++|++++.. ..|.||||.|+..|+.++++.|+++|++++.+|..|.||||+|+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 356899999999999999999999999999854 448999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCC-cHHHHH--HHcCCHHHHHH
Q psy9492 114 FGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGN-VALHWA--IYAKNHVAITT 190 (584)
Q Consensus 114 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~-TpLh~A--~~~g~~~~v~~ 190 (584)
.|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++..+. .|. ||||+| +..|+.+++++
T Consensus 80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN-NVQVCKFLVESGAAVFAMTY-SDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCS-SSCCCHHHHCCSSSTTCCCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCcceecC-CCCcchHHHHHHhhhccHHHHHH
Confidence 99999999999999999999999999999999988 89999999999999999998 555 999999 78899999999
Q ss_pred HHhcCCCCCCC---------CCCCCCHHHHHHhcCC
Q psy9492 191 LVSHTSSLEIP---------NAQGLTPFMLLEENIG 217 (584)
Q Consensus 191 Ll~~gad~~~~---------n~~g~tpl~lA~~~~~ 217 (584)
|+++|++++.. +..+.+|.+++.+.|.
T Consensus 158 Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 158 LYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999998876 5668888888877665
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.7e-27 Score=214.90 Aligned_cols=151 Identities=24% Similarity=0.302 Sum_probs=144.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFS 150 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~ 150 (584)
..||||.|+..|+.++++.|+++|++++ .|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG-H 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT-C
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-h
Confidence 3589999999999999999999999887 5889999999999999999999999999999999999999999999988 8
Q ss_pred hhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHH
Q psy9492 151 LDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKI 229 (584)
Q Consensus 151 ~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l 229 (584)
.+++++|++.|++++..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+ +++.|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~-----i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDM-LKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED-----LAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-----HHHHH
T ss_pred HHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH-----HHHHh
Confidence 9999999999999999998 9999999999999999999999999999999999999999999999988 77765
No 70
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.5e-27 Score=219.40 Aligned_cols=159 Identities=20% Similarity=0.235 Sum_probs=150.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGAD-PTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
+.||||.|+..|+.++++.|++.|.+ ++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG- 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT-
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCC-
Confidence 46899999999999999999999977 7889999999999999999999999999999999999999999999999988
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHH
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKI 229 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l 229 (584)
+.+++++|++.|++++..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+ +++.|
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~-----~~~~L 154 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDW-NGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRK-----VQQVI 154 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-----HHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHH-----HHHHH
Confidence 89999999999999999998 9999999999999999999999999999999999999999999999988 88888
Q ss_pred HHHHhcc
Q psy9492 230 TELKDHY 236 (584)
Q Consensus 230 ~~~~~~~ 236 (584)
.+.....
T Consensus 155 ~~~~~~~ 161 (172)
T 3v30_A 155 ENHILKL 161 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8755543
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=8.5e-28 Score=218.66 Aligned_cols=154 Identities=26% Similarity=0.320 Sum_probs=148.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFS 150 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~ 150 (584)
..||||.|+..|+.++++.|+++|++++.+|..|.||||.|+. |+.+++++|+++|++++.+|..|.||||+|+..| +
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~ 82 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG-F 82 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-C
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-C
Confidence 5699999999999999999999999999999999999999999 9999999999999999999999999999999988 8
Q ss_pred hhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHhcCCCccchHHHHHHH
Q psy9492 151 LDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSS-LEIPNAQGLTPFMLLEENIGAPWLGKATVDKI 229 (584)
Q Consensus 151 ~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l 229 (584)
.+++++|++.|++++.+|. .|+||||+|+..|+.+++++|+++|++ ++.+|..|.||+++|+..++.+ +++.|
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~-----~~~~L 156 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDN-EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE-----VVSLM 156 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH-----HHHHH
T ss_pred HHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH-----HHHHH
Confidence 9999999999999999998 999999999999999999999999998 5999999999999999999998 88888
Q ss_pred HHH
Q psy9492 230 TEL 232 (584)
Q Consensus 230 ~~~ 232 (584)
.+.
T Consensus 157 l~~ 159 (162)
T 1ihb_A 157 QAN 159 (162)
T ss_dssp HHT
T ss_pred HHh
Confidence 763
No 72
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-28 Score=251.76 Aligned_cols=209 Identities=14% Similarity=0.113 Sum_probs=165.1
Q ss_pred hhhhHHHHHHHHHcCCCCCCC-----------------CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHH
Q psy9492 13 FELTKVFVGKCVEAGQDVNEP-----------------DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPL 75 (584)
Q Consensus 13 ~~~~~~~l~~ll~~g~d~n~~-----------------d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL 75 (584)
.+...++++.|+++|++++.. .....+.+|.|+..+..++++.|++.|+++|...+..|.|||
T Consensus 56 ~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpL 135 (327)
T 1sw6_A 56 DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPL 135 (327)
T ss_dssp CHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHH
T ss_pred cCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHH
Confidence 446789999999999987762 112223458888888899999999999999984445599999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCC---HHHHHHHHHCC-CCCCCCCCCCCcHHHHHHh----h
Q psy9492 76 HWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGH---TRIVAYLVAKG-INVNLQDRNGMTALMWSAY----K 147 (584)
Q Consensus 76 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~g-~~~~~~d~~g~t~Lh~Aa~----~ 147 (584)
|+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+ .++++.|++.+ .+++.+|..|.||||+|+. .
T Consensus 136 h~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~ 215 (327)
T 1sw6_A 136 HWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMT 215 (327)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTST
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccc
Confidence 99999999999999999999999999999999999999998 67888888875 7799999999999999998 5
Q ss_pred cCChhhHHHHHhc--------------------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC
Q psy9492 148 VFSLDPTRLLITF--------------------GASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLT 207 (584)
Q Consensus 148 ~~~~~~~~~Ll~~--------------------ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~t 207 (584)
| +.+++++|++. |++++..|. .|.||||.|+. +++|+++ +++.+|..|.|
T Consensus 216 g-~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~-~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~T 285 (327)
T 1sw6_A 216 G-CSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG-ERKDSILENLD------LKWIIAN--MLNAQDSNGDT 285 (327)
T ss_dssp T-CHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCC
T ss_pred c-cHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc-cCCChhHHHHH------HHHHHHh--CCCCCCCCCCC
Confidence 5 78999999887 899999998 99999999995 8999998 68999999999
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHHhcc
Q psy9492 208 PFMLLEENIGAPWLGKATVDKITELKDHY 236 (584)
Q Consensus 208 pl~lA~~~~~~~~l~~~~~~~l~~~~~~~ 236 (584)
|||+|+..++.+ +++.|.+.+...
T Consensus 286 pLh~A~~~g~~~-----~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 286 CLNIAARLGNIS-----IVDALLDYGADP 309 (327)
T ss_dssp HHHHHHHHCCHH-----HHHHHHHTTCCT
T ss_pred HHHHHHHcCCHH-----HHHHHHHcCCCC
Confidence 999999999998 999998755443
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=2.1e-27 Score=214.72 Aligned_cols=153 Identities=21% Similarity=0.261 Sum_probs=129.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC-CCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 37 TVTLLHWAAINNRIEIMKYFISQ-GAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
|.||||.|+..|+.++++.|+++ +.+++..+.. |.||||+ +..|+.++++.|+++|++++.+|..|.||||.|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~-g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTT-SCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCC-CCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 45788888888888888888887 3366665544 8888888 8888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy9492 116 HTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH 194 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~ 194 (584)
+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++. ++++..|. .|.||||+|+..|+.+++++|+++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~-~~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG-HTAVVSFLAAE-SDLHRRDA-RGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT-CHHHHHHHHTT-SCTTCCCT-TSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC-hHHHHHHHHhc-cCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHhh
Confidence 888888888888888888888888888888887 78888888888 88888887 888888888888888888888864
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.1e-27 Score=219.01 Aligned_cols=161 Identities=22% Similarity=0.300 Sum_probs=149.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhc
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQH-GADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKV 148 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~ 148 (584)
.+.+|||.|+..|+.++++.|++. +.+++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 377999999999999999999998 6789999999999999999999999999999999999999999999999999998
Q ss_pred CChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHH
Q psy9492 149 FSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDK 228 (584)
Q Consensus 149 ~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~ 228 (584)
+.+++++|++.|++++.+|. .|.||||+|+..|+.+++++|+++|+|++.+|..|.||+++|.+.++.+ +++.
T Consensus 84 -~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~-----~~~~ 156 (179)
T 3f6q_A 84 -HRDIVQKLLQYKADINAVNE-HGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLREL-----LRER 156 (179)
T ss_dssp -CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHH-----HHHH
T ss_pred -CHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHH-----HHHH
Confidence 89999999999999999998 9999999999999999999999999999999999999999999987777 8888
Q ss_pred HHHHHhccc
Q psy9492 229 ITELKDHYN 237 (584)
Q Consensus 229 l~~~~~~~~ 237 (584)
|.+.+...+
T Consensus 157 L~~~g~~~~ 165 (179)
T 3f6q_A 157 AEKMGQNLN 165 (179)
T ss_dssp HHHTTCCCS
T ss_pred HHHhhcCcc
Confidence 877555443
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.1e-27 Score=215.85 Aligned_cols=155 Identities=22% Similarity=0.281 Sum_probs=145.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhh
Q psy9492 69 DLQATPLHWATRQGHLDSVVLLIQ-HGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYK 147 (584)
Q Consensus 69 ~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~ 147 (584)
..|.||||.|+..|+.++++.|++ .+.+++..|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 447899999999999999999998 4578888899999999999999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHH
Q psy9492 148 VFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVD 227 (584)
Q Consensus 148 ~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~ 227 (584)
+ +.+++++|++.|++++..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|.+ ++.+ +++
T Consensus 86 ~-~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~-----i~~ 157 (165)
T 3twr_A 86 G-HYEVAELLVKHGAVVNVADL-WKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTD-----IQD 157 (165)
T ss_dssp T-CHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHH-----HHH
T ss_pred C-cHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChH-----HHH
Confidence 8 89999999999999999998 99999999999999999999999999999999999999999877 6666 777
Q ss_pred HHHH
Q psy9492 228 KITE 231 (584)
Q Consensus 228 ~l~~ 231 (584)
+|.+
T Consensus 158 ~L~~ 161 (165)
T 3twr_A 158 LLRG 161 (165)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7754
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1e-26 Score=210.18 Aligned_cols=152 Identities=26% Similarity=0.379 Sum_probs=145.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQH-GADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
+.||||.|+..|+.++++.|++. +.+++.+|..|.||||. +..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG- 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC-
Confidence 46899999999999999999998 45999999999999999 9999999999999999999999999999999999998
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHH
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKI 229 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l 229 (584)
+.+++++|++.|++++.+|. .|+||||+|+..|+.+++++|+++ +|++.+|..|.||+++|++.++.+ +++.|
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~-----~v~~L 152 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQD-----LVDIL 152 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHH-----HHHHH
T ss_pred cHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHH-----HHHHH
Confidence 89999999999999999998 999999999999999999999999 999999999999999999999988 88877
Q ss_pred HH
Q psy9492 230 TE 231 (584)
Q Consensus 230 ~~ 231 (584)
.+
T Consensus 153 l~ 154 (156)
T 1bd8_A 153 QG 154 (156)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 77
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.6e-26 Score=209.14 Aligned_cols=140 Identities=21% Similarity=0.208 Sum_probs=97.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCc-HHHHHHhhc
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMT-ALMWSAYKV 148 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t-~Lh~Aa~~~ 148 (584)
.|.||||+|+..|+.++++.|+++|++++.+|..|.||||.|+ .|+.+++++|+++|++++.+|..|.| |||+|+..|
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 3677777777777777777777777777777777777777774 77777788887777777777777777 888888777
Q ss_pred CChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy9492 149 FSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLL 212 (584)
Q Consensus 149 ~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA 212 (584)
+.+++++|+++|++++..|. .|+||||+|+..|+.+++++|+++|+|++.+|..|.||.+-+
T Consensus 90 -~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 90 -FLDTLVVLHRAGARLDVRDA-WGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp -CHHHHHHHHHHTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred -CHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 67888888888888888877 788888888888888888888888888888888888876643
No 78
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=6.5e-27 Score=218.23 Aligned_cols=163 Identities=18% Similarity=0.160 Sum_probs=125.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCH----HHHHHHHHCCCCCCCCCCCCChHHHHHH
Q psy9492 37 TVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHL----DSVVLLIQHGADPTLMDSEGSTCIHQAA 112 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~----~~v~~Ll~~gad~~~~d~~g~t~L~~A~ 112 (584)
+.++|+.|+..|+.+.++.+++.+.+ ..++..|.||||+|+..|+. +++++|+++|+|++.+|..|.||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 46788888888888888888877643 33324488888888888875 4888888888888888888888888888
Q ss_pred HhCC------HHHHHHHHHCCCCCCCCCCCCC-cHHHHHHhhcC----ChhhHHHHHh-cCCCcccccCCCCCcHHHHHH
Q psy9492 113 QFGH------TRIVAYLVAKGINVNLQDRNGM-TALMWSAYKVF----SLDPTRLLIT-FGASTTIQDKIHGNVALHWAI 180 (584)
Q Consensus 113 ~~g~------~~~v~~Ll~~g~~~~~~d~~g~-t~Lh~Aa~~~~----~~~~~~~Ll~-~ga~~~~~d~~~g~TpLh~A~ 180 (584)
..++ .+++++|+++|++++.+|..|. ||||+|+..+. ..+++++|++ .|++++..|. .|.||||+|+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~-~G~TpL~~A~ 162 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK-WGLTALEFVK 162 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT-TSCCHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC-CCCCHHHHHH
Confidence 8876 4678888888888888888888 88888877332 2357777887 7888888887 7888888888
Q ss_pred HcCCHHHHHHHHhcCCCCCCCC
Q psy9492 181 YAKNHVAITTLVSHTSSLEIPN 202 (584)
Q Consensus 181 ~~g~~~~v~~Ll~~gad~~~~n 202 (584)
..|+.+++++|.+...+.+.++
T Consensus 163 ~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 163 RCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp TTTCHHHHHHHHHHHHHHTCCC
T ss_pred HcCCHHHHHHHHHHHHHHhccc
Confidence 8888888888877665555544
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=4.4e-26 Score=201.31 Aligned_cols=133 Identities=20% Similarity=0.232 Sum_probs=76.3
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CC
Q psy9492 27 GQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSE-GS 105 (584)
Q Consensus 27 g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~-g~ 105 (584)
+++++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+. |+.+++++|+++|++++.+|.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC-CCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 4555666666666666666666666666666666665554433 5666666666 6666666666666666555555 55
Q ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCC
Q psy9492 106 TCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGA 162 (584)
Q Consensus 106 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga 162 (584)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG-HRDIARYLHAATG 135 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT-CHHHHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-CHHHHHHHHHcCC
Confidence 5555555555555555555555555555555555555555444 4555555555444
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=5.6e-26 Score=220.93 Aligned_cols=160 Identities=16% Similarity=0.127 Sum_probs=119.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
.|.||||.|++.|+.+.++.|+++|++++. +..|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g- 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG- 81 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT-
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-
Confidence 489999999999999999999999999986 478999999999999999999999999999999999999999999998
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CHHHHH--HhcCCCccchHHHH
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGL-TPFMLL--EENIGAPWLGKATV 226 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~-tpl~lA--~~~~~~~~l~~~~~ 226 (584)
+.+++++|++.|+++|.+|. .|+||||+|+..|+.+++++|+++|+|++.+|..|. ||+++| ...++.+ ++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~-----~~ 155 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADS-DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ-----CS 155 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCC-----HH
T ss_pred CHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHH-----HH
Confidence 89999999999999999998 999999999999999999999999999999998887 999999 7778899 99
Q ss_pred HHHHHHHhccc
Q psy9492 227 DKITELKDHYN 237 (584)
Q Consensus 227 ~~l~~~~~~~~ 237 (584)
+.|.+......
T Consensus 156 ~~Ll~~~a~~~ 166 (239)
T 1ycs_B 156 QFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHhhhccc
Confidence 99988655543
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=7.6e-26 Score=199.77 Aligned_cols=134 Identities=22% Similarity=0.263 Sum_probs=128.0
Q ss_pred CCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC-CC
Q psy9492 60 GAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRN-GM 138 (584)
Q Consensus 60 g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~ 138 (584)
+++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+. |+.+++++|+++|++++.+|.. |.
T Consensus 2 ~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGS-SDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCC-CSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCC-CccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 4567766655 9999999999999999999999999999999999999999999 9999999999999999999999 99
Q ss_pred cHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy9492 139 TALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSS 197 (584)
Q Consensus 139 t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad 197 (584)
||||+|+..| +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|+++|||
T Consensus 80 t~L~~A~~~~-~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREG-FLDTLVVLHRAGARLDVCDA-WGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHT-CHHHHHHHHHTCCCCCCCSS-SSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcC-CHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999998 89999999999999999998 999999999999999999999999986
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=8.3e-26 Score=204.51 Aligned_cols=146 Identities=21% Similarity=0.207 Sum_probs=119.8
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCh-HH
Q psy9492 30 VNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGST-CI 108 (584)
Q Consensus 30 ~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t-~L 108 (584)
.+..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+ .|+.+++++|+++|++++.+|..|.| ||
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSY-GRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPV 82 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSS-SCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 3556789999999999999999999999999999987664 999999985 99999999999999999999999999 99
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHH
Q psy9492 109 HQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWA 179 (584)
Q Consensus 109 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A 179 (584)
|+|++.|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|+++|++++..|. .|.||.+-+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~~v~~Ll~~ga~~~~~~~-~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG-HRDVARYLRAAAGGTRGSNH-ARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT-CHHHHHHHSSCC------------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC-HHHHHHHHHHcCCCCCccCc-CcCcccccC
Confidence 9999999999999999999999999999999999999998 89999999999999999998 999998744
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=2.3e-26 Score=222.17 Aligned_cols=163 Identities=21% Similarity=0.180 Sum_probs=142.1
Q ss_pred HHHHHHCCCcccccC--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCC
Q psy9492 53 MKYFISQGAIVDAIG--GDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINV 130 (584)
Q Consensus 53 v~~Ll~~g~~~~~~~--~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 130 (584)
++.|+++|++++... +..|.||||+|+..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 467889998877543 334678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHhcCCCCCCCCCCCCCH
Q psy9492 131 NLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWA--IYAKNHVAITTLVSHTSSLEIPNAQGLTP 208 (584)
Q Consensus 131 ~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A--~~~g~~~~v~~Ll~~gad~~~~n~~g~tp 208 (584)
+.+|..|.||||+|+..| +.+++++|++.|++++..++..|+||||+| +..|+.+++++|+++|+|++.+|..|.||
T Consensus 81 n~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 159 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCN-DTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA 159 (229)
T ss_dssp TCCCTTCCCHHHHHHHTT-CHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEE
T ss_pred CCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHH
Confidence 999999999999999988 899999999999999999754999999999 99999999999999999999999999999
Q ss_pred HHHHHhcC
Q psy9492 209 FMLLEENI 216 (584)
Q Consensus 209 l~lA~~~~ 216 (584)
++.+....
T Consensus 160 l~~~~~~~ 167 (229)
T 2vge_A 160 LWDYSAEF 167 (229)
T ss_dssp SSCBCCSS
T ss_pred HHHHhhcc
Confidence 87554443
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1e-25 Score=210.11 Aligned_cols=158 Identities=15% Similarity=0.140 Sum_probs=140.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHHhCCH----HHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTLMD-SEGSTCIHQAAQFGHT----RIVAYLVAKGINVNLQDRNGMTALMWSA 145 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa 145 (584)
+.++|+.|++.|+.+.++.+++.+. +.++ ..|.||||+|+..|+. +++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4689999999999999999998764 4555 7799999999999975 5999999999999999999999999999
Q ss_pred hhcCC-----hhhHHHHHhcCCCcccccCCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCCCCCCCCCCCCCHHHHHH
Q psy9492 146 YKVFS-----LDPTRLLITFGASTTIQDKIHGN-VALHWAIYAK-----NHVAITTLVS-HTSSLEIPNAQGLTPFMLLE 213 (584)
Q Consensus 146 ~~~~~-----~~~~~~Ll~~ga~~~~~d~~~g~-TpLh~A~~~g-----~~~~v~~Ll~-~gad~~~~n~~g~tpl~lA~ 213 (584)
..+.. .+++++|++.|+++|.+|. .|+ ||||+|+..+ +.+++++|++ +|+|++.+|..|+|||++|.
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~ 162 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBG-GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCC-CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence 88732 5789999999999999998 999 9999999944 4679999999 99999999999999999999
Q ss_pred hcCCCccchHHHHHHHHHHHhcc
Q psy9492 214 ENIGAPWLGKATVDKITELKDHY 236 (584)
Q Consensus 214 ~~~~~~~l~~~~~~~l~~~~~~~ 236 (584)
+.++.+ +++.|.+...+.
T Consensus 163 ~~~~~~-----~v~~L~~~~~~~ 180 (186)
T 3t8k_A 163 RCQKPI-----ALKMMEDYIKKY 180 (186)
T ss_dssp TTTCHH-----HHHHHHHHHHHH
T ss_pred HcCCHH-----HHHHHHHHHHHH
Confidence 999988 888888754443
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.8e-24 Score=184.66 Aligned_cols=125 Identities=37% Similarity=0.538 Sum_probs=106.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFS 150 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~ 150 (584)
|.||||+|+..|+.++++.|+++|++++.+|..|.||||.|+..++.+++++|+++|++++.+|..|.||||+|+..+ +
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG-H 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-C
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC-h
Confidence 778888888888888888888888888888888888888888888888888888888888888888888888888777 7
Q ss_pred hhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy9492 151 LDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSS 197 (584)
Q Consensus 151 ~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad 197 (584)
.+++++|++.|++++..|. .|.||||+|+..|+.+++++|+++|||
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 8888888888888888887 888888888888888888888888876
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=4.4e-24 Score=188.37 Aligned_cols=124 Identities=31% Similarity=0.364 Sum_probs=101.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
.+.||||+|+..|+.++++.|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~- 91 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG- 91 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT-
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC-
Confidence 3667888888888888888888888888888888888888888888888888888888888888888888888888777
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHT 195 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~g 195 (584)
+.+++++|++.|++++..|. .|+||||+|+..|+.+++++|+++|
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDK-FGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCCCcCcCC-CCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 68888888888888888887 8888888888888888888888765
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.2e-23 Score=179.42 Aligned_cols=126 Identities=40% Similarity=0.575 Sum_probs=121.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
+|.||||.|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999999999887655 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCC
Q psy9492 116 HTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGAS 163 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~ 163 (584)
+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG-HLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC-cHHHHHHHHHcCCC
Confidence 999999999999999999999999999999988 89999999999986
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.7e-23 Score=184.65 Aligned_cols=127 Identities=33% Similarity=0.369 Sum_probs=119.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q psy9492 33 PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAA 112 (584)
Q Consensus 33 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~ 112 (584)
....|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 4567889999999999999999999999999987655 999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcC
Q psy9492 113 QFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFG 161 (584)
Q Consensus 113 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~g 161 (584)
..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~-~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG-NEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC-CHHHHHHHHHcC
Confidence 999999999999999999999999999999999988 899999999876
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=4.8e-24 Score=188.28 Aligned_cols=132 Identities=28% Similarity=0.322 Sum_probs=100.8
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCh
Q psy9492 27 GQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGST 106 (584)
Q Consensus 27 g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 106 (584)
|+|+ .+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5677 67788888888888888888888888888888766544 888888888888888888888888888888888888
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcC
Q psy9492 107 CIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFG 161 (584)
Q Consensus 107 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~g 161 (584)
|||+|++.|+.+++++|+++|++++.+|..|.||+|+|+..+ ..+++++|.+.+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~-~~~~l~~l~~~~ 132 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES-MKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH-HHHHHSCC----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc-HHHHHhhccccc
Confidence 888888888888888888888888888888888888887666 555655555443
No 90
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=1.1e-25 Score=232.54 Aligned_cols=166 Identities=13% Similarity=0.081 Sum_probs=134.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCccccc--CCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy9492 18 VFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAI--GGDLQATPLHWATRQGHLDSVVLLIQHGA 95 (584)
Q Consensus 18 ~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga 95 (584)
+..+.++++|.+ +.||||+|+..|+.+++++|+++|+..... .+..|.||||+|+..|+.++|++|+++|+
T Consensus 80 ~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga 152 (376)
T 2aja_A 80 QLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 152 (376)
T ss_dssp THHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT
T ss_pred HHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 344555555543 459999999999999999999998732111 11236789999999999999999999997
Q ss_pred CC---CCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-hhcCChhhHHHHHhcCCCcccccC
Q psy9492 96 DP---TLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNL--QDRNGMTALMWSA-YKVFSLDPTRLLITFGASTTIQDK 169 (584)
Q Consensus 96 d~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~t~Lh~Aa-~~~~~~~~~~~Ll~~ga~~~~~d~ 169 (584)
|+ +..+.. .||||.|+..|+.+++++|+++|++++. .|..|.||||+|+ .+| +.+++++|++.|+
T Consensus 153 d~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G-~~eiv~~Ll~~ga------- 223 (376)
T 2aja_A 153 TEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG-HHNVINFLLDCPV------- 223 (376)
T ss_dssp TTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC-CHHHHHHHTTSHH-------
T ss_pred CccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC-CHHHHHHHHhCCC-------
Confidence 63 222223 8999999999999999999999999887 8888999999999 888 8999999999763
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q psy9492 170 IHGNVALHWAIYAKNHVAITTLVSHTSSLEI 200 (584)
Q Consensus 170 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 200 (584)
.|.||||+|+..|+.+++++|+++|++++.
T Consensus 224 -~~~taL~~Aa~~g~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 224 -MLAYAEIHEFEYGEKYVNPFIARHVNRLKE 253 (376)
T ss_dssp -HHHHHHHCTTTTTTTTHHHHHHHHHHHHHH
T ss_pred -ccchHHHHHHHCCCHHHHHHHHhcCccccc
Confidence 378999999999999999999988876543
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=6.6e-24 Score=187.38 Aligned_cols=120 Identities=26% Similarity=0.320 Sum_probs=74.4
Q ss_pred CCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCC
Q psy9492 94 GADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGN 173 (584)
Q Consensus 94 gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~ 173 (584)
|+|+ .+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~-~g~ 77 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHG-HLKVVELLLQHKALVNTTGY-QND 77 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCG-GGC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCcccCcCC-CCC
Confidence 4455 45566666666666666666666666666666666666666666666555 56666666666666666665 666
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcC
Q psy9492 174 VALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENI 216 (584)
Q Consensus 174 TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~ 216 (584)
||||+|+..|+.+++++|+++|+|++.+|..|.||+++|...+
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc
Confidence 6666666666666666666666666666666666666665544
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=3e-23 Score=192.89 Aligned_cols=140 Identities=24% Similarity=0.251 Sum_probs=128.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHH
Q psy9492 34 DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMD-SEGSTCIHQAA 112 (584)
Q Consensus 34 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~t~L~~A~ 112 (584)
+.+|.||||+|+..|+.++++.|++ |++++..+.. |.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578899999999999999999999 9999987655 9999999999999999999999999999988 88999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy9492 113 QFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLV 192 (584)
Q Consensus 113 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll 192 (584)
..|+.+++++|+++|++++.+|..|.||||+|+..+. . . .+.|||++|+..|..++++.|.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-~-----------------~-~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK-T-----------------T-PKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH-T-----------------C-CCCSHHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc-C-----------------c-ccccHHHHHHHcCHHHHHHHHH
Confidence 9999999999999999999999999999999997652 1 2 6789999999999999999998
Q ss_pred hc
Q psy9492 193 SH 194 (584)
Q Consensus 193 ~~ 194 (584)
++
T Consensus 180 ~~ 181 (183)
T 3deo_A 180 GQ 181 (183)
T ss_dssp TC
T ss_pred Hh
Confidence 65
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=2e-23 Score=203.51 Aligned_cols=142 Identities=24% Similarity=0.251 Sum_probs=126.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHH
Q psy9492 35 SETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMD-SEGSTCIHQAAQ 113 (584)
Q Consensus 35 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~t~L~~A~~ 113 (584)
.+|.||||+|+..|+.++++.|++ |++++..+.. |.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 467899999999999999999999 8899887755 9999999999999999999999999999888 789999999999
Q ss_pred hCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy9492 114 FGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVS 193 (584)
Q Consensus 114 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~ 193 (584)
.|+.+++++|+++|++++.+|..|.||||+|+..+. +. .+.||||+|+..|+.+++++|++
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~-~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TT-PKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TC-CCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------cc-CCCCHHHHHHHcChHHHHHHHHH
Confidence 999999999999999999999999999999986542 12 78899999999999999999998
Q ss_pred cCCC
Q psy9492 194 HTSS 197 (584)
Q Consensus 194 ~gad 197 (584)
++.+
T Consensus 182 ~~~~ 185 (244)
T 3ui2_A 182 QVFE 185 (244)
T ss_dssp HHEE
T ss_pred hccc
Confidence 7654
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.2e-22 Score=202.24 Aligned_cols=140 Identities=19% Similarity=0.161 Sum_probs=124.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCChHHHHHHHh---CCHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTL------MDSEGSTCIHQAAQF---GHTRIVAYLVAKGINVNLQDRNGMTAL 141 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~------~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~L 141 (584)
+.++||.|+..|+.+.++.|++.|+|++. .|..|.||||+|+.. |+.+++++|+++|++++.+|..|.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34679999999999999999999999988 689999999999997 899999999999999999999999999
Q ss_pred HHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCC
Q psy9492 142 MWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGA 218 (584)
Q Consensus 142 h~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~ 218 (584)
|+|+..| +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|+++|++ .|.|||++|++.++.
T Consensus 231 h~A~~~g-~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYN-QPDCLKLLLKGRALVGTVNE-AGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTT-CHHHHHHHHHTTCCCSCCCT-TSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHcC-CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999988 89999999999999999998 999999999999999999999999986 589999999988764
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=2.4e-24 Score=210.11 Aligned_cols=168 Identities=20% Similarity=0.182 Sum_probs=145.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
.+.+++..++..|+.+.++.+...+.+++ ..|.||||+|+..|+.++++.|++ |++++.+|..|.||||+|+..|
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~----~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g 88 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADVV----SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLG 88 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHHH----HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHT
T ss_pred CCccHHHHHHHcCCCcccccccccccccc----cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCC
Confidence 44556666666666666555555555554 237899999999999999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy9492 116 HTRIVAYLVAKGINVNLQD-RNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH 194 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~~~~~d-~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~ 194 (584)
+.+++++|+++|++++.+| ..|.||||+|+..| +.+++++|++.|++++.+|. .|+||||+|+..++
T Consensus 89 ~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~~~~---------- 156 (244)
T 3ui2_A 89 SDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV-RPEVVEALVELGADIEVEDE-RGLTALELAREILK---------- 156 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT-CHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHHT----------
T ss_pred CHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC-CHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHHHh----------
Confidence 9999999999999999998 78999999999998 89999999999999999998 99999999997332
Q ss_pred CCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHH
Q psy9492 195 TSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITEL 232 (584)
Q Consensus 195 gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~ 232 (584)
+..+.||+++|++.++.+ +++.|.+.
T Consensus 157 -------~~~~~~~l~~a~~~g~~~-----iv~~L~~~ 182 (244)
T 3ui2_A 157 -------TTPKGNPMQFGRRIGLEK-----VINVLEGQ 182 (244)
T ss_dssp -------TCCCSSHHHHHHHHHHHH-----HHHHHHHH
T ss_pred -------ccCCCCHHHHHHHcChHH-----HHHHHHHh
Confidence 367899999999999888 88888774
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=6.8e-23 Score=196.62 Aligned_cols=135 Identities=27% Similarity=0.314 Sum_probs=111.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhhc
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAK-GINVNLQDRNGMTALMWSAYKV 148 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~Lh~Aa~~~ 148 (584)
.|.||||+|+..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 378999999999999999999999999999999999999999999999999999998 9999999999999999999988
Q ss_pred CChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q psy9492 149 FSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGL 206 (584)
Q Consensus 149 ~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~ 206 (584)
+.+++++|++.|++++..|. .|.||||+|+..|+.++++.|++.|++.+.+|.+|.
T Consensus 152 -~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 152 -YADIVQLLLAKGARTDLRNI-EKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp -CHHHHHHHHHHTCCSCCCCT-TSCCHHHHCCSHHHHHHHC-----------------
T ss_pred -CHHHHHHHHHcCCCCccccC-CCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 79999999999999999998 999999999999999999999999998888776654
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.7e-22 Score=203.06 Aligned_cols=142 Identities=20% Similarity=0.134 Sum_probs=124.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCccccc-----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCChH
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQGAIVDAI-----GGDLQATPLHWATRQ---GHLDSVVLLIQHGADPTLMDSEGSTC 107 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~-----~~~~g~tpLh~A~~~---g~~~~v~~Ll~~gad~~~~d~~g~t~ 107 (584)
.+.++||.|+..|+.+.++.|++.|++++.. .+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 3457899999999999999999999999873 345599999999997 89999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCH
Q psy9492 108 IHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNH 185 (584)
Q Consensus 108 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~ 185 (584)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++ .|.||||+|+..|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~-~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKH-HKECEELLEQAQAG-------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHT-CHHHHHHHHHHHHH-------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHHhcCC-------CCCChhHHHHhcCCc
Confidence 99999999999999999999999999999999999999988 89999999998864 589999999998864
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.8e-22 Score=187.72 Aligned_cols=137 Identities=23% Similarity=0.285 Sum_probs=125.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhhc
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQD-RNGMTALMWSAYKV 148 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~Lh~Aa~~~ 148 (584)
.|.||||+|+..|+.++++.|++ |++++.+|..|.||||+|+..|+.+++++|+++|++++.+| ..|.||||+|+..|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 47899999999999999999999 99999999999999999999999999999999999999998 88999999999988
Q ss_pred CChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHH
Q psy9492 149 FSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDK 228 (584)
Q Consensus 149 ~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~ 228 (584)
+.+++++|++.|++++.+|. .|+||||+|+..++. ..+.+|++.|++.+..+ +++.
T Consensus 122 -~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~-----i~~~ 177 (183)
T 3deo_A 122 -RPEVVEALVELGADIEVEDE-RGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEK-----VINV 177 (183)
T ss_dssp -CHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHH-----HHHH
T ss_pred -cHHHHHHHHHcCCCCcCCCC-CCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHH-----HHHH
Confidence 89999999999999999998 999999999985432 56789999999998877 7777
Q ss_pred HHH
Q psy9492 229 ITE 231 (584)
Q Consensus 229 l~~ 231 (584)
|.+
T Consensus 178 L~~ 180 (183)
T 3deo_A 178 LEG 180 (183)
T ss_dssp HHT
T ss_pred HHH
Confidence 643
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=1.2e-23 Score=217.42 Aligned_cols=177 Identities=15% Similarity=0.067 Sum_probs=149.2
Q ss_pred CCcHHHHHHH-cCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCChHHHHHH
Q psy9492 37 TVTLLHWAAI-NNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADP---TLMDSEGSTCIHQAA 112 (584)
Q Consensus 37 g~t~Lh~A~~-~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~---~~~d~~g~t~L~~A~ 112 (584)
+.++++.|.. .++.+++++++++|.+. .||||+|++.|+.+++++|+++|++. +..|..|.||||.|+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~~--------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa 136 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIKS--------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCCH--------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCCc--------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH
Confidence 3467778777 47889999999988653 49999999999999999999999833 234567889999999
Q ss_pred HhCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCccc--ccCCCCCcHHHHHH-HcCCHH
Q psy9492 113 QFGHTRIVAYLVAKGINV---NLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTI--QDKIHGNVALHWAI-YAKNHV 186 (584)
Q Consensus 113 ~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~--~d~~~g~TpLh~A~-~~g~~~ 186 (584)
+.|+.+++++|+++|+++ +..+.+ .||||+|+.+| +.+++++|++.|++++. .|. .|.||||+|+ ..|+.+
T Consensus 137 ~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G-~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 137 ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENG-HLHVLNRLCELAPTEATAMIQA-ENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTT-CHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHHSTTCCHH
T ss_pred HcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCC-CHHHHHHHHHcCCccchhccCC-CCCCHHHHHHHHCCCHH
Confidence 999999999999999762 222333 89999999998 89999999999999987 887 8999999999 999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhcc
Q psy9492 187 AITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDHY 236 (584)
Q Consensus 187 ~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~~ 236 (584)
++++|+++|++ |.||++.|+++|+.+ ++++|.+.....
T Consensus 214 iv~~Ll~~ga~-------~~taL~~Aa~~g~~e-----vv~lL~~~ga~~ 251 (376)
T 2aja_A 214 VINFLLDCPVM-------LAYAEIHEFEYGEKY-----VNPFIARHVNRL 251 (376)
T ss_dssp HHHHHTTSHHH-------HHHHHHCTTTTTTTT-----HHHHHHHHHHHH
T ss_pred HHHHHHhCCCc-------cchHHHHHHHCCCHH-----HHHHHHhcCccc
Confidence 99999998853 899999999999999 888888754443
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=3.4e-22 Score=172.89 Aligned_cols=109 Identities=27% Similarity=0.387 Sum_probs=54.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHh
Q psy9492 35 SETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQF 114 (584)
Q Consensus 35 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~ 114 (584)
..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTT-SSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34445555555555555555555555554443322 45555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy9492 115 GHTRIVAYLVAKGINVNLQDRNGMTALMWS 144 (584)
Q Consensus 115 g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A 144 (584)
|+.+++++|+++|++++.+|..|.||||+|
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 555555555555555555555555555544
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=6.4e-22 Score=171.14 Aligned_cols=112 Identities=26% Similarity=0.427 Sum_probs=106.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcC
Q psy9492 70 LQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF 149 (584)
Q Consensus 70 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~ 149 (584)
.|.||||+|+..|+.++++.|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~- 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG- 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT-
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC-
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcC
Q psy9492 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAK 183 (584)
Q Consensus 150 ~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g 183 (584)
+.+++++|++.|++++..|. .|.||||+|...+
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGP-DGLTAFEATDNQA 117 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCT-TSCCHHHHCCCHH
T ss_pred CHHHHHHHHHcCCCCCCcCC-CCCCHHHHhCCHH
Confidence 89999999999999999998 9999999995433
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=3.1e-22 Score=191.94 Aligned_cols=135 Identities=22% Similarity=0.260 Sum_probs=115.6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHH
Q psy9492 33 PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQH-GADPTLMDSEGSTCIHQA 111 (584)
Q Consensus 33 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~t~L~~A 111 (584)
.|.+|.||||+|+..|+.++++.|++.|++++..+.. |.||||+|+..|+.+++++|+++ |++++.+|..|.||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKA-GSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 3567899999999999999999999999999987655 99999999999999999999999 999999999999999999
Q ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccC
Q psy9492 112 AQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDK 169 (584)
Q Consensus 112 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~ 169 (584)
+..|+.+++++|+++|++++.+|..|.||||+|+..+ ..++++.|++.|+..+..+.
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~-~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAA-CASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHH-HHHHHC--------------
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchh-HHHHHHHHhccchhhhccch
Confidence 9999999999999999999999999999999999888 79999999999998876665
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=3.3e-21 Score=207.72 Aligned_cols=139 Identities=18% Similarity=0.136 Sum_probs=118.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCC------CCCCChHHHHHHH---hCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy9492 72 ATPLHWATRQGHLDSVVLLIQHGADPTLM------DSEGSTCIHQAAQ---FGHTRIVAYLVAKGINVNLQDRNGMTALM 142 (584)
Q Consensus 72 ~tpLh~A~~~g~~~~v~~Ll~~gad~~~~------d~~g~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh 142 (584)
.+.||.|+..|+.+.++.|++.|+|++.+ |..|.||||+|++ .|+.+++++|+++|++++.+|..|.||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 46899999999999999999999999987 8899999999976 89999999999999999999999999999
Q ss_pred HHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q psy9492 143 WSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLL 212 (584)
Q Consensus 143 ~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA 212 (584)
+|+..| +.+++++|+++|+++|.+|. .|+||||+|+..|+.+++++|+++|||++..+....++..++
T Consensus 213 ~A~~~g-~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~~~~ 280 (497)
T 3lvq_E 213 YAALYN-QPDCLKLLLKGRALVGTVNE-AGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVIS 280 (497)
T ss_dssp HHTTTT-CHHHHHHHHHTCCCCSCCCT-TCCCHHHHHHHTTCHHHHHHHHHTCC----------------
T ss_pred HHHHcC-CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccccCC
Confidence 999998 89999999999999999998 999999999999999999999999999988544444444333
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.5e-20 Score=186.72 Aligned_cols=199 Identities=15% Similarity=0.103 Sum_probs=124.3
Q ss_pred CCCCCC-----CCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCC
Q psy9492 27 GQDVNE-----PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG-ADPTLM 100 (584)
Q Consensus 27 g~d~n~-----~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~~~~ 100 (584)
|..+.. .|..+.+.++.+...|+..+.+++...-..........+....+ ....-..+++.+.- ......
T Consensus 51 g~~is~v~s~~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~~~~~ 126 (278)
T 1dcq_A 51 GVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIA----RKDYITAKYMERRYARKKHAD 126 (278)
T ss_dssp CTTTCCEEETTTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHH----HHHHHHHHHTTCTTSCCCSSS
T ss_pred CCCcceeeeeecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHH----HHHHHHHHHHHhhcccccccc
Confidence 666653 67788899999999998777766543322211111111112111 11111112222211 111111
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHhhc--CChhhHHHHHhcCCCcccccCCCC
Q psy9492 101 DSEGSTCIHQAAQFGHTRIVAYLVAKGIN------VNLQDRNGMTALMWSAYKV--FSLDPTRLLITFGASTTIQDKIHG 172 (584)
Q Consensus 101 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~Lh~Aa~~~--~~~~~~~~Ll~~ga~~~~~d~~~g 172 (584)
+....++|+.|++.|+.+.+..+++.|.+ ++..|..|.||||+|+..+ ++.+++++|++.|+++|.+|. .|
T Consensus 127 ~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~-~g 205 (278)
T 1dcq_A 127 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG-KG 205 (278)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-TC
T ss_pred cchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC-CC
Confidence 22234677777777777777777777777 3344667777777777762 267777777777777777776 77
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCCCccchHHHHHHHHHHHhc
Q psy9492 173 NVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITELKDH 235 (584)
Q Consensus 173 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~n~~g~tpl~lA~~~~~~~~l~~~~~~~l~~~~~~ 235 (584)
+||||+|+..|+.+++++|+++|+|++.+|.+|.|||++|+..++.+ +++.|.+.+..
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~-----~v~~Ll~~ga~ 263 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH-----CEELLTQALSG 263 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-----HHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH-----HHHHHHHcCCC
Confidence 77777777777777777777777777777777777777777777777 77777765443
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1e-20 Score=194.61 Aligned_cols=144 Identities=21% Similarity=0.197 Sum_probs=118.7
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHHCCCCCCCCC--CCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhh
Q psy9492 71 QATPLHWATRQ-GHLDSVVLLIQHGADPTLMD--SEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYK 147 (584)
Q Consensus 71 g~tpLh~A~~~-g~~~~v~~Ll~~gad~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~ 147 (584)
+.|+||.|+.. |+.++++.|+++|+|++..| ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45799999999 99999999999999999988 8899999999999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC---CCCCCCCCCCCHHHHHHhcC
Q psy9492 148 VFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTS---SLEIPNAQGLTPFMLLEENI 216 (584)
Q Consensus 148 ~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~ga---d~~~~n~~g~tpl~lA~~~~ 216 (584)
| +.+++++|++.|++++..|. .|.||||+|+..|+.+++++|++++. +....+..+.|+++++....
T Consensus 279 g-~~~~v~~LL~~Gad~~~~d~-~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 279 G-HTGLACLFLKRGADLGARDS-EGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp T-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred C-cHHHHHHHHHCcCCCCCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 8 89999999999999999998 99999999999999999999998763 44566778889988876643
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=9.3e-21 Score=195.00 Aligned_cols=162 Identities=23% Similarity=0.237 Sum_probs=119.3
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHHCCCcccccCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q psy9492 35 SETVTLLHWAAIN-NRIEIMKYFISQGAIVDAIGG-DLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAA 112 (584)
Q Consensus 35 ~~g~t~Lh~A~~~-~~~~~v~~Ll~~g~~~~~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~ 112 (584)
..+.|+||.|+.. |+.++++.|+++|++++..+. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3456899999999 999999999999999998762 45999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCC---cccccCCCCCcHHHHHHHcCC--HHH
Q psy9492 113 QFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGAS---TTIQDKIHGNVALHWAIYAKN--HVA 187 (584)
Q Consensus 113 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~---~~~~d~~~g~TpLh~A~~~g~--~~~ 187 (584)
..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+..+.. ....+. .+.|+++.+..... .+.
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g-~~~iv~lLl~~~~~~~~~~~~~~-~~~t~l~i~~~~~~~~~~~ 354 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETA-NADIVTLLRLAKMREAEAAQGQA-GDETYLDIFRDFSLMASDD 354 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHHHHC------------------------------
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCC-CHHHHHHHHHcCCCcccccccCC-CCCCHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999988 89999999987633 333344 78889887776542 223
Q ss_pred HHHHHhcCCCC
Q psy9492 188 ITTLVSHTSSL 198 (584)
Q Consensus 188 v~~Ll~~gad~ 198 (584)
.+.|...+.++
T Consensus 355 ~ekl~r~~~~~ 365 (368)
T 3jue_A 355 PEKLSRRSHDL 365 (368)
T ss_dssp -----------
T ss_pred HHHHHhcCCCc
Confidence 44455555444
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=5.5e-20 Score=198.11 Aligned_cols=137 Identities=23% Similarity=0.183 Sum_probs=117.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCccccc-----CCCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCCCCCCCChHH
Q psy9492 37 TVTLLHWAAINNRIEIMKYFISQGAIVDAI-----GGDLQATPLHWATR---QGHLDSVVLLIQHGADPTLMDSEGSTCI 108 (584)
Q Consensus 37 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~-----~~~~g~tpLh~A~~---~g~~~~v~~Ll~~gad~~~~d~~g~t~L 108 (584)
..+.||.|+..|+.+.++.|+++|+++|.. .+..|.||||+|+. .|+.+++++|+++|+|++.+|..|.|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999999866 23459999999976 8999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHH
Q psy9492 109 HQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIY 181 (584)
Q Consensus 109 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~ 181 (584)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..| +.+++++|++.|++++. ||+|.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~~~~~Ll~~ga~~~~-------~~~h~~~~ 276 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKH-HKECEELLEQAQAGTFA-------FPLHVDYS 276 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTT-CHHHHHHHHHTCC-------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHHhCCCCCC-------Ccceeecc
Confidence 9999999999999999999999999999999999999988 89999999999998765 56676543
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=2.7e-19 Score=177.66 Aligned_cols=126 Identities=23% Similarity=0.203 Sum_probs=118.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCC------CCCCCCChHHHHHHHh---CCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy9492 72 ATPLHWATRQGHLDSVVLLIQHGADPT------LMDSEGSTCIHQAAQF---GHTRIVAYLVAKGINVNLQDRNGMTALM 142 (584)
Q Consensus 72 ~tpLh~A~~~g~~~~v~~Ll~~gad~~------~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh 142 (584)
.++|+.|+..|+.+.++.+++.|++++ ..|..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 368999999999999999999999954 4488899999999999 8999999999999999999999999999
Q ss_pred HHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy9492 143 WSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLE 199 (584)
Q Consensus 143 ~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 199 (584)
+|+..| +.+++++|++.|++++.+|. .|.||||+|+..|+.+++++|+++|++..
T Consensus 211 ~A~~~g-~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 211 YCCLTD-NAECLKLLLRGKASIEIANE-SGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHTT-CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHcC-CHHHHHHHHHcCCCCCCccC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999998 89999999999999999998 99999999999999999999999998643
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.2e-19 Score=148.53 Aligned_cols=91 Identities=43% Similarity=0.635 Sum_probs=44.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFS 150 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~ 150 (584)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..| +
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG-H 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-C
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-C
Confidence 445555555555555555555555555555555555555555555555555555554444444444444444444444 3
Q ss_pred hhhHHHHHhcCC
Q psy9492 151 LDPTRLLITFGA 162 (584)
Q Consensus 151 ~~~~~~Ll~~ga 162 (584)
.+++++|++.|+
T Consensus 81 ~~~~~~Ll~~ga 92 (93)
T 1n0q_A 81 LEVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 444444444443
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.7e-19 Score=147.65 Aligned_cols=93 Identities=41% Similarity=0.585 Sum_probs=87.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhC
Q psy9492 36 ETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFG 115 (584)
Q Consensus 36 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g 115 (584)
+|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999999987765 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCC
Q psy9492 116 HTRIVAYLVAKGIN 129 (584)
Q Consensus 116 ~~~~v~~Ll~~g~~ 129 (584)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999875
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=3.8e-20 Score=157.84 Aligned_cols=107 Identities=26% Similarity=0.339 Sum_probs=72.9
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCChhhHHHHHhcCCCcccccCCCCCcHHHHH
Q psy9492 100 MDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWA 179 (584)
Q Consensus 100 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~~~~~~~Ll~~ga~~~~~d~~~g~TpLh~A 179 (584)
+|..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|++.|++++..|. .|.||||+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~d~-~g~tpl~~A 82 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNG-HAEIVKLLLAKGADVNARSK-DGNTPEHLA 82 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTT-CHHHHHHHTTTTCCTTCCCT-TCCCTTHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-cHHHHHHHHHcCCCCcccCC-CCCCHHHHH
Confidence 4666666666666666666666666666666666666677777666665 56667777777777766666 677777777
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCH
Q psy9492 180 IYAKNHVAITTLVSHTSSLEIPNAQGLTP 208 (584)
Q Consensus 180 ~~~g~~~~v~~Ll~~gad~~~~n~~g~tp 208 (584)
+..|+.+++++|+++|+|++.++..|.||
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 77777777777777777777777777665
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=8.2e-20 Score=155.72 Aligned_cols=108 Identities=38% Similarity=0.448 Sum_probs=73.3
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy9492 32 EPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQA 111 (584)
Q Consensus 32 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A 111 (584)
.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS-SCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 35666777777777777777777777777766655433 66777777777777777777777777777777777777777
Q ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCcH
Q psy9492 112 AQFGHTRIVAYLVAKGINVNLQDRNGMTA 140 (584)
Q Consensus 112 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~ 140 (584)
++.++.+++++|+++|++++.++..|.||
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 77777777777777777776666666665
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=9.5e-17 Score=135.61 Aligned_cols=92 Identities=30% Similarity=0.373 Sum_probs=65.7
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCcccccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHH
Q psy9492 31 NEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQ 110 (584)
Q Consensus 31 n~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~ 110 (584)
+..|.+|.|+||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~-g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN-GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 445667777777777777777777777777777766543 7777777777777777777777777777777777777777
Q ss_pred HHHhCCHHHHHHH
Q psy9492 111 AAQFGHTRIVAYL 123 (584)
Q Consensus 111 A~~~g~~~~v~~L 123 (584)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 7777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=2.2e-16 Score=133.31 Aligned_cols=85 Identities=35% Similarity=0.417 Sum_probs=39.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhhcCC
Q psy9492 71 QATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFS 150 (584)
Q Consensus 71 g~tpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~Aa~~~~~ 150 (584)
|.||||+|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..| +
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-~ 102 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG-N 102 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-C
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC-C
Confidence 444444444444444444444444444444444444444444444444444444444444444444444444444443 3
Q ss_pred hhhHHH
Q psy9492 151 LDPTRL 156 (584)
Q Consensus 151 ~~~~~~ 156 (584)
.+++++
T Consensus 103 ~~~~~~ 108 (110)
T 2zgd_A 103 EDLAEI 108 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 115
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=60.44 E-value=4 Score=27.84 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=23.3
Q ss_pred CcccccccccccCCCCCcCccCCcccc
Q psy9492 384 PLSFCSTCLVRKPIRSKHCSICNRCVA 410 (584)
Q Consensus 384 ~~~~C~~c~~~kp~Rs~hC~~c~~cv~ 410 (584)
....|+.|...-|+++..|+.||.--+
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~~l 39 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYKRL 39 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSCCC
T ss_pred CCccCCCCCCcCCCCceecCCCCCccc
Confidence 457899999999999999999997543
No 116
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=57.38 E-value=4.1 Score=28.19 Aligned_cols=27 Identities=26% Similarity=0.600 Sum_probs=23.0
Q ss_pred CcccccccccccCCCCCcCccCCcccc
Q psy9492 384 PLSFCSTCLVRKPIRSKHCSICNRCVA 410 (584)
Q Consensus 384 ~~~~C~~c~~~kp~Rs~hC~~c~~cv~ 410 (584)
...+|..|...-|+|+.-|+.||..-+
T Consensus 18 ~k~ICrkC~ARnp~~A~~CRKCg~~~L 44 (56)
T 2ayj_A 18 LKKVCRKCGALNPIRATKCRRCHSTNL 44 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCCCCE
T ss_pred chhhhccccCcCCcccccccCCCCCCC
Confidence 457899999999999999999886533
No 117
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.42 E-value=10 Score=28.91 Aligned_cols=24 Identities=21% Similarity=0.592 Sum_probs=17.9
Q ss_pred cccccccccc--cCCCCCcCccCCcc
Q psy9492 385 LSFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 385 ~~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
...|..|... --.|-|||+.||+.
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~v 39 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNS 39 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcE
Confidence 3468888754 45788999999974
No 118
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=45.12 E-value=9.3 Score=29.46 Aligned_cols=26 Identities=27% Similarity=0.452 Sum_probs=19.0
Q ss_pred cCcccccccccc--cCCCCCcCccCCcc
Q psy9492 383 EPLSFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 383 ~~~~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
+....|..|... --.|-|||+.||+.
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~v 34 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRA 34 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCE
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCE
Confidence 344578888764 34688999999984
No 119
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=42.90 E-value=11 Score=28.60 Aligned_cols=24 Identities=25% Similarity=0.643 Sum_probs=17.8
Q ss_pred cccccccccc--cCCCCCcCccCCcc
Q psy9492 385 LSFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 385 ~~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
...|..|... --.|-|||+.||+.
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v 46 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYV 46 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCE
T ss_pred CCCCcCcCCccccchhcccccCCCcE
Confidence 3568888754 34688999999884
No 120
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=42.42 E-value=9 Score=28.32 Aligned_cols=23 Identities=26% Similarity=0.619 Sum_probs=17.3
Q ss_pred ccccccccc--cCCCCCcCccCCcc
Q psy9492 386 SFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 386 ~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
..|..|... --.|-|||+.||+.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v 36 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGV 36 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCE
T ss_pred CcccCCCCccCCccccccCCCCCEE
Confidence 468888754 34688999999984
No 121
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=41.52 E-value=12 Score=28.31 Aligned_cols=24 Identities=25% Similarity=0.641 Sum_probs=17.9
Q ss_pred cccccccccc--cCCCCCcCccCCcc
Q psy9492 385 LSFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 385 ~~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
...|..|... --.|-|||+.||+.
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v 44 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHI 44 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCE
T ss_pred CCcccCcCCcccCccccccCCCCCCE
Confidence 3568888754 34688999999984
No 122
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=40.57 E-value=11 Score=31.14 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=17.5
Q ss_pred ccccccccc--cCCCCCcCccCCcc
Q psy9492 386 SFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 386 ~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
..|..|... -..|-|||+.||+.
T Consensus 70 ~~C~~C~~~Fs~~~RrHHCR~CG~v 94 (125)
T 1joc_A 70 QNCMACGKGFSVTVRRHHCRQCGNI 94 (125)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCE
T ss_pred CCCcCcCCccccccccccCCCCCeE
Confidence 468888764 34688999999974
No 123
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=40.37 E-value=11 Score=34.76 Aligned_cols=24 Identities=29% Similarity=0.715 Sum_probs=18.0
Q ss_pred ccccccccc--cCCCCCcCccCCccc
Q psy9492 386 SFCSTCLVR--KPIRSKHCSICNRCV 409 (584)
Q Consensus 386 ~~C~~c~~~--kp~Rs~hC~~c~~cv 409 (584)
..|..|... --.|-|||+.||+.+
T Consensus 162 ~~C~~C~~~F~~~~rrhhCr~CG~v~ 187 (220)
T 1dvp_A 162 RVCHRCRVEFTFTNRKHHCRNCGQVF 187 (220)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CccCCCCCccCCcccccccCCcCCEE
Confidence 578888754 346889999999843
No 124
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=33.24 E-value=15 Score=33.82 Aligned_cols=23 Identities=30% Similarity=0.741 Sum_probs=16.8
Q ss_pred ccccccccc--cCCCCCcCccCCcc
Q psy9492 386 SFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 386 ~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
..|..|... --.|-|||+.||+.
T Consensus 165 ~~C~~C~~~F~~~~RrhHCR~CG~v 189 (226)
T 3zyq_A 165 EECHRCRVQFGVMTRKHHCRACGQI 189 (226)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCE
T ss_pred CCCcCcCCCCCccccccccCCCcCE
Confidence 468888743 33578999999884
No 125
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=32.89 E-value=12 Score=30.62 Aligned_cols=23 Identities=22% Similarity=0.629 Sum_probs=17.2
Q ss_pred ccccccccc--cCCCCCcCccCCcc
Q psy9492 386 SFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 386 ~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
..|..|... -..|-|||+.||+.
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~i 44 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKN 44 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCE
T ss_pred CcccCcCCccccccccccCCCCCCe
Confidence 458888753 34688999999984
No 126
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=29.43 E-value=30 Score=23.24 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=20.1
Q ss_pred cCcccccccccccCCCCCcCccCCc
Q psy9492 383 EPLSFCSTCLVRKPIRSKHCSICNR 407 (584)
Q Consensus 383 ~~~~~C~~c~~~kp~Rs~hC~~c~~ 407 (584)
++...|..|...-||--.||..|-.
T Consensus 9 eD~WkC~~C~k~N~Pl~ryC~rCwa 33 (53)
T 2cr8_A 9 EDEWQCTECKKFNSPSKRYCFRCWA 33 (53)
T ss_dssp SCCEECSSSCCEECSSCCBCTTTCC
T ss_pred cceeecccccccCCCccchhHHHHH
Confidence 4456799999999998889887755
No 127
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=29.27 E-value=22 Score=27.38 Aligned_cols=23 Identities=30% Similarity=0.794 Sum_probs=16.8
Q ss_pred ccccccccc--cCCCCCcCccCCcc
Q psy9492 386 SFCSTCLVR--KPIRSKHCSICNRC 408 (584)
Q Consensus 386 ~~C~~c~~~--kp~Rs~hC~~c~~c 408 (584)
..|..|... --.|-|||+.||+.
T Consensus 21 ~~C~~C~~~F~~~~RrhhCr~CG~v 45 (90)
T 3t7l_A 21 PNCMNCQVKFTFTKRRHHCRACGKV 45 (90)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCE
T ss_pred CcCcCCCCcccchhhCccccCCCCE
Confidence 458888753 34578999999874
No 128
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=25.88 E-value=30 Score=22.77 Aligned_cols=24 Identities=25% Similarity=0.549 Sum_probs=19.6
Q ss_pred CcccccccccccCCCCCcCccCCc
Q psy9492 384 PLSFCSTCLVRKPIRSKHCSICNR 407 (584)
Q Consensus 384 ~~~~C~~c~~~kp~Rs~hC~~c~~ 407 (584)
....|..|...-||--.||..|-.
T Consensus 12 D~WkC~~C~~~N~Pl~r~C~rCw~ 35 (46)
T 2c6a_A 12 DYWKCTSCNEMNPPLPSHCNRCWA 35 (46)
T ss_dssp GCEECTTTCCEECSSCSSCTTTCC
T ss_pred ceEecccccccCCCccchhhHHHh
Confidence 346799999999999889887754
No 129
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=24.70 E-value=16 Score=30.92 Aligned_cols=39 Identities=31% Similarity=0.665 Sum_probs=22.2
Q ss_pred cccccccccccCC-CCCcCccCCccccCC--c-cccccccccc
Q psy9492 385 LSFCSTCLVRKPI-RSKHCSICNRCVAKF--D-HHCPWVGNCI 423 (584)
Q Consensus 385 ~~~C~~c~~~kp~-Rs~hC~~c~~cv~~~--D-HhC~w~~ncI 423 (584)
..||..|+.+.+. ...||..||-|...- | .||.==|.|+
T Consensus 83 ~Y~C~~C~l~d~~k~~yHC~~CgiCR~G~~~~ffHC~~C~~C~ 125 (143)
T 2dkt_A 83 EYYCSICHLFDKDKRQYHCESCGICRIGPKEDFFHCLKCNLCL 125 (143)
T ss_dssp SEECSSSCCEECSSSEEEETTTTEEEESCGGGEEEETTTTEEE
T ss_pred eeEeceeecccCCCceecCCCCCceeccCCcCcEECCcCCeee
Confidence 4578888776443 345677777766651 1 2555444454
No 130
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=23.97 E-value=1.1e+02 Score=31.77 Aligned_cols=27 Identities=11% Similarity=0.016 Sum_probs=12.0
Q ss_pred HhcCCCcccccCCCCCcHHHHHHHcCCHHH
Q psy9492 158 ITFGASTTIQDKIHGNVALHWAIYAKNHVA 187 (584)
Q Consensus 158 l~~ga~~~~~d~~~g~TpLh~A~~~g~~~~ 187 (584)
.+.|..+|...- ++-+...++.|+.+-
T Consensus 167 ~~~G~~Pd~~ty---~~Li~~~~~~g~~d~ 193 (501)
T 4g26_A 167 VESEVVPEEPEL---AALLKVSMDTKNADK 193 (501)
T ss_dssp HHTTCCCCHHHH---HHHHHHHHHTTCHHH
T ss_pred HhcCCCCCHHHH---HHHHHHHhhCCCHHH
Confidence 444555544322 233444455555443
No 131
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=22.08 E-value=91 Score=32.35 Aligned_cols=104 Identities=11% Similarity=0.003 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH----HCCCcccccCCCCCCcHHHHHHHcCCHHHH--
Q psy9492 14 ELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFI----SQGAIVDAIGGDLQATPLHWATRQGHLDSV-- 87 (584)
Q Consensus 14 ~~~~~~l~~ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~g~tpLh~A~~~g~~~~v-- 87 (584)
+...++.+.+.+.|..+|...- .+.+...+..|+.+-+..++ +.|..+|...- .+.|...++.|+.+-+
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty---n~lI~~~~~~g~~~~A~~ 161 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY---GPALFGFCRKGDADKAYE 161 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH---HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee---hHHHHHHHHCCCHHHHHH
Confidence 3344555555666665543211 23344455556654443333 34554443221 1334444566665433
Q ss_pred --HHHHHCCCCCCCCCCCCChHHHHHHHhCCHHHHHHHH
Q psy9492 88 --VLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLV 124 (584)
Q Consensus 88 --~~Ll~~gad~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 124 (584)
+.+.+.|..|+... -.+.+...++.|+.+-+.-++
T Consensus 162 l~~~M~~~G~~Pd~~t--y~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 162 VDAHMVESEVVPEEPE--LAALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHH--HHHHHHHHhhCCCHHHHHHHH
Confidence 33344555554321 112333445566655443333
No 132
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=20.74 E-value=1.9e+02 Score=28.88 Aligned_cols=24 Identities=29% Similarity=0.468 Sum_probs=20.6
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHH
Q psy9492 102 SEGSTCIHQAAQFGHTRIVAYLVA 125 (584)
Q Consensus 102 ~~g~t~L~~A~~~g~~~~v~~Ll~ 125 (584)
.-|.|.+|+|++..+.+++..|+.
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhh
Confidence 358899999999999999888886
Done!