RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9492
(584 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 110 bits (276), Expect = 7e-27
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 20 VGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWAT 79
V ++ G N + + T LH AA E+ KY + A V+A D Q TPLH A
Sbjct: 16 VKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ-TPLHCAA 74
Query: 80 RQGHLDSVVLLIQHGADP---------------------------------TLMDSEGST 106
R GH + V LL+++ A+P M +G T
Sbjct: 75 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFT 134
Query: 107 CIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTI 166
+H AA++G R+ L+ + + N +NG+T L + + +LD +LL+ G S
Sbjct: 135 PLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN-NLDIVKLLLPRGGSPHS 193
Query: 167 QDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFML 211
+G LH A +L+ + S + QG+TP L
Sbjct: 194 PAW-NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHL 237
Score = 109 bits (272), Expect = 2e-26
Identities = 47/206 (22%), Positives = 74/206 (35%), Gaps = 36/206 (17%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
T LH A+ + I+K + +GA + ++ TPLH A R GH + L+Q+ A
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE-TPLHMAARAGHTEVAKYLLQNKAKVN 60
Query: 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAK-------------------------------- 126
+ T +H AA+ GHT +V L+
Sbjct: 61 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120
Query: 127 -GINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNH 185
+ + G T L +A + LL+ A K +G LH A++ N
Sbjct: 121 KEASQACMTKKGFTPLHVAAKY-GKVRVAELLLERDAHPNAAGK-NGLTPLHVAVHHNNL 178
Query: 186 VAITTLVSHTSSLEIPNAQGLTPFML 211
+ L+ S P G TP +
Sbjct: 179 DIVKLLLPRGGSPHSPAWNGYTPLHI 204
Score = 96.6 bits (239), Expect = 5e-22
Identities = 48/255 (18%), Positives = 82/255 (32%), Gaps = 35/255 (13%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQA----------- 72
++ VN + T LH AA ++K + A +
Sbjct: 53 LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 112
Query: 73 ---------------------TPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQA 111
TPLH A + G + LL++ A P G T +H A
Sbjct: 113 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA 172
Query: 112 AQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIH 171
+ IV L+ +G + + NG T L +A + LL + + +
Sbjct: 173 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG--GSANAESVQ 230
Query: 172 GNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITE 231
G LH A + + L+S ++ + N GLTP L+ + G + +
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE-GHVPVADVLIKHGVM 289
Query: 232 LKDHYNTQQNIIHRF 246
+ +H
Sbjct: 290 VDATTRMGYTPLHVA 304
Score = 92.3 bits (228), Expect = 1e-20
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Query: 20 VGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWAT 79
V + + N + +T LH A + + I G +VDA TPLH A+
Sbjct: 247 VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY-TPLHVAS 305
Query: 80 RQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMT 139
G++ V L+QH AD G + +HQAAQ GHT IV L+ G + N +G T
Sbjct: 306 HYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTT 365
Query: 140 ALMWSAYKVFSLDPTRLLITF---GASTTIQDK 169
L + + T +L + + DK
Sbjct: 366 PLAIAKRL-GYISVTDVLKVVTDETSFVLVSDK 397
Score = 91.6 bits (226), Expect = 2e-20
Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 3/210 (1%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ E V +E + T LH AA ++ + + + +
Sbjct: 96 TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 155
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIV 120
A +A G + TPLH A +LD V LL+ G P G T +H AA+ +
Sbjct: 156 AHPNAAGKN-GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 214
Query: 121 AYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAI 180
L+ G + N + G+T L +A + + LL++ A+ + +K G LH
Sbjct: 215 RSLLQYGGSANAESVQGVTPLHLAAQEGH-AEMVALLLSKQANGNLGNK-SGLTPLHLVA 272
Query: 181 YAKNHVAITTLVSHTSSLEIPNAQGLTPFM 210
+ L+ H ++ G TP
Sbjct: 273 QEGHVPVADVLIKHGVMVDATTRMGYTPLH 302
Score = 91.6 bits (226), Expect = 2e-20
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 3/196 (1%)
Query: 20 VGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWAT 79
V + G + P T LH AA N++E+ + + G +A TPLH A
Sbjct: 181 VKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES-VQGVTPLHLAA 239
Query: 80 RQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMT 139
++GH + V LL+ A+ L + G T +H AQ GH + L+ G+ V+ R G T
Sbjct: 240 QEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT 299
Query: 140 ALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLE 199
L + ++ + L+ A + K G LH A + +T L+ + +S
Sbjct: 300 PLHVA-SHYGNIKLVKFLLQHQADVNAKTK-LGYSPLHQAAQQGHTDIVTLLLKNGASPN 357
Query: 200 IPNAQGLTPFMLLEEN 215
++ G TP + +
Sbjct: 358 EVSSDGTTPLAIAKRL 373
Score = 60.8 bits (146), Expect = 2e-10
Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 4/109 (3%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ V ++ DVN + LH AA +I+ + G
Sbjct: 294 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 353
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLL---IQHGADPTLMDSEGST 106
A + + D TPL A R G++ +L + + D +
Sbjct: 354 ASPNEVSSDGT-TPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMS 401
Score = 48.0 bits (113), Expect = 2e-06
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 138 MTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSS 197
+T L +++ L + L+ GAS + + LH A A + L+ + +
Sbjct: 1 LTPLHVASFMG-HLPIVKNLLQRGASPNVSNV-KVETPLHMAARAGHTEVAKYLLQNKAK 58
Query: 198 LEIPNAQGLTPFML 211
+ TP
Sbjct: 59 VNAKAKDDQTPLHC 72
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 91.6 bits (226), Expect = 4e-21
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 28 QDVNEPDSETVTLLHWAAINNRIEIMKYFISQ-GAIVDAI---GGDLQATPLHWATRQGH 83
+D T L AA +E++K + + GA V+A G + L +
Sbjct: 139 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198
Query: 84 LDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAK-GINVNLQDRNGMTALM 142
LL+ HGAD + G T + A + H +V L+ + I +N D +G TAL+
Sbjct: 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL 258
Query: 143 WSAYKVFSLDPTRLLITFGASTTIQDKI 170
+ LL GAST D +
Sbjct: 259 LAVEL-KLKKIAELLCKRGASTDCGDLV 285
Score = 85.4 bits (210), Expect = 5e-19
Identities = 46/216 (21%), Positives = 78/216 (36%), Gaps = 15/216 (6%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
++ + + + G DVNE D T AA+ +++ +K+ +G
Sbjct: 69 KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128
Query: 61 AIVDAIGGDLQ---------ATPLHWATRQGHLDSVVLLIQH-GADPTLMDSEGSTCIHQ 110
A V+ + AT L A +GH++ + +L+ GAD D+ G +
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188
Query: 111 A----AQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTI 166
A I L+ G +VN++ G T L+ + K RLL
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248
Query: 167 QDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPN 202
D G AL A+ K L +S + +
Sbjct: 249 TDS-DGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 80.4 bits (197), Expect = 2e-17
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 8/164 (4%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
LL A N +++++ + GA V+ + TPLH A + D V LL++HGADP
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVF--------S 150
L G+T AA G +++ ++KG +VN D G TA M +A
Sbjct: 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126
Query: 151 LDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH 194
L + + G AL A + + L+
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170
Score = 48.4 bits (114), Expect = 1e-06
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 103 EGSTCIHQAAQFGHTRIVAYLVAKGINVNLQD-RNGMTALMWSAYK 147
E + + +A Q +V L+ G NVN Q+ G T L +
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQM 49
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 89.2 bits (220), Expect = 7e-20
Identities = 29/241 (12%), Positives = 60/241 (24%), Gaps = 28/241 (11%)
Query: 29 DVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDA----IGGDLQA------TPLHWA 78
+ + + N ++ + A + + D A
Sbjct: 38 SLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVA 97
Query: 79 TRQGHLDS---VVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDR 135
G + + LL+ ++ +E AA+ GH ++ L +
Sbjct: 98 AITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI 157
Query: 136 N--GMTALMWSAYKVFSLDPTRLLITFGAS--TTIQDKIHGNVALHWAIYAKNHVAITTL 191
A +A L L + T + + A+ +H I L
Sbjct: 158 QAENYHAFRLAAENGH-LHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 216
Query: 192 VSHTSSLEIP-------NAQGLTPFMLLEENI---GAPWLGKATVDKITELKDHYNTQQN 241
+ L + + PF+ N + D + +L Q
Sbjct: 217 LDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQG 276
Query: 242 I 242
Sbjct: 277 F 277
Score = 85.7 bits (211), Expect = 8e-19
Identities = 24/164 (14%), Positives = 46/164 (28%), Gaps = 9/164 (5%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRIEIMKYF---ISQGAIVDAIGGDLQATPLHWATR 80
+ D ++ ++ + AAI + ++ IV I + A
Sbjct: 77 KQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-NYQAFRLAAE 135
Query: 81 QGHLDSVVLLIQHGADPTLMD--SEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGM 138
GHL + L + + +E AA+ GH ++ L
Sbjct: 136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 195
Query: 139 --TALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAI 180
A W+A + L+ + IH +
Sbjct: 196 NYYAFRWAAVGRGHHNVINFLLDCPVMLAYAE-IHEFEYGEKYV 238
Score = 85.7 bits (211), Expect = 1e-18
Identities = 29/240 (12%), Positives = 54/240 (22%), Gaps = 62/240 (25%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQ-ATPLHWATRQG 82
+ + + V +E AA N + ++ + A G
Sbjct: 113 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENG 172
Query: 83 HLDSVVLLIQHGADPTLM---DSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRN--- 136
HL + L + A GH ++ +L+ + + + +
Sbjct: 173 HLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFE 232
Query: 137 -------------------GMTALMWSAYKVF--------------------------SL 151
A S L
Sbjct: 233 YGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLL 292
Query: 152 DPTRLLITFGASTTIQDKIH----GNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLT 207
D R L++ + N L A+ + L+ L IP+ LT
Sbjct: 293 DDIRFLLSIPGIKALAPTATIPGDANELLRLALR-LGNQGACALL-----LSIPSVLALT 346
Score = 71.1 bits (173), Expect = 6e-14
Identities = 22/197 (11%), Positives = 45/197 (22%), Gaps = 19/197 (9%)
Query: 40 LLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTL 99
L+ W N + ++FIS + +A + + LL + A
Sbjct: 18 LIPWILWEN---LFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNR 74
Query: 100 MDSEGSTCIHQAAQFGHT--------------RIVAYLVAKGINVNLQDRNGMTALMWSA 145
+ + H+ + L+ V + A +A
Sbjct: 75 NAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 134
Query: 146 YKVFSLDPTRLLITFGASTTIQDK-IHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQ 204
L L + + A A + + L + Q
Sbjct: 135 ENGH-LHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 193
Query: 205 GLTPFMLLEENIGAPWL 221
+ +G
Sbjct: 194 AENYYAFRWAAVGRGHH 210
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 84.6 bits (208), Expect = 3e-19
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 25 EAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHL 84
D ++ T LHWA EI+++ + G V+ +PLH A G
Sbjct: 25 ADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA-GWSPLHIAASAGRD 83
Query: 85 DSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWS 144
+ V L+ GA ++ G T +H AA I L+ G N + +D TA+ +
Sbjct: 84 EIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRA 143
Query: 145 AYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQ 204
A K L +L+ + AST IQD GN LH A + LVS +S+ I N +
Sbjct: 144 AAKGN-LKMIHILLYYKASTNIQDT-EGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 201
Query: 205 GLTPFMLLEEN 215
TP + +
Sbjct: 202 EKTPLQVAKGG 212
Score = 82.3 bits (202), Expect = 2e-18
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ + V + G VN + T LH+AA NR EI + G
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIV 120
A DA +AT +H A +G+L + +L+ + A + D+EG+T +H A
Sbjct: 127 ANPDAKDHY-EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEA 185
Query: 121 AYLVAKGINVNLQDRNGMTALMWSAY 146
LV++G ++ ++++ T L +
Sbjct: 186 KLLVSQGASIYIENKEEKTPLQVAKG 211
Score = 50.0 bits (118), Expect = 2e-07
Identities = 18/149 (12%), Positives = 38/149 (25%), Gaps = 34/149 (22%)
Query: 105 STCIHQAAQFGHTRIVA-YLVAKGINVNLQDRNGMTALMWSAYKVFSLDP---------- 153
+ + A G + ++A D++ TAL W+ +
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63
Query: 154 ----------------------TRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTL 191
+ L+ GA ++ +G LH+A H L
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQ-NGCTPLHYAASKNRHEIAVML 122
Query: 192 VSHTSSLEIPNAQGLTPFMLLEENIGAPW 220
+ ++ + + T
Sbjct: 123 LEGGANPDAKDHYEATAMHRAAAKGNLKM 151
Score = 29.2 bits (64), Expect = 1.1
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFI 57
V G + + E T L A I+K +
Sbjct: 189 VSQGASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 85.5 bits (210), Expect = 6e-19
Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 28/209 (13%)
Query: 25 EAGQDVNEP-DSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGH 83
++N P D T LHW +E++K+ + G+ + + L A + +
Sbjct: 94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGE-SCLVKAVKSVN 152
Query: 84 L-------DSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTR------------IVAYLV 124
+ L DS T +H ++ ++V
Sbjct: 153 NYDSGTFEALLDYLYPCLILE---DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV 209
Query: 125 AKG-INVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTI--QDKIHGNVALHWAIY 181
K + + + L + + + + QD +G+ L+ A
Sbjct: 210 KKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS-NGDTCLNIAAR 268
Query: 182 AKNHVAITTLVSHTSSLEIPNAQGLTPFM 210
N + L+ + + I N GL P
Sbjct: 269 LGNISIVDALLDYGADPFIANKSGLRPVD 297
Score = 80.5 bits (197), Expect = 3e-17
Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 15/143 (10%)
Query: 18 VFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIE------------IMKYFISQGAIVDA 65
F + DS T+LH I + + +M + + +
Sbjct: 158 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQ 217
Query: 66 IGGDLQATPLHWATRQGHLDSVVLLIQH---GADPTLMDSEGSTCIHQAAQFGHTRIVAY 122
G + + + + + + L DS G TC++ AA+ G+ IV
Sbjct: 218 SGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 277
Query: 123 LVAKGINVNLQDRNGMTALMWSA 145
L+ G + + +++G+ + + A
Sbjct: 278 LLDYGADPFIANKSGLRPVDFGA 300
Score = 75.5 bits (184), Expect = 1e-15
Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 29/180 (16%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRI-------EIMKYFISQGAIVDAIGGDLQATPLH 76
V+ G + D+ + L A + ++ Y + D++ T LH
Sbjct: 127 VKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM----NRTILH 182
Query: 77 WATRQGHLDS------------VVLLIQHGADPT-LMDSEGSTCIHQAAQFGHTRIVAYL 123
+ + +++ P +E + + I+ L
Sbjct: 183 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 242
Query: 124 VAK---GINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAI 180
K +N QD NG T L +A ++ L+ +GA I +K G + +
Sbjct: 243 DLKWIIANMLNAQDSNGDTCLNIAARL-GNISIVDALLDYGADPFIANK-SGLRPVDFGA 300
Score = 74.7 bits (182), Expect = 3e-15
Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 18/198 (9%)
Query: 32 EPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLI 91
E S H + + E+ F + ++ + TPLHW T +L+ V L+
Sbjct: 68 EGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV 127
Query: 92 QHGADPTLMDSEGSTCIHQAAQFGHTR----IVAYLVAKGINVNLQDRNGMTAL------ 141
+HG++ D+ G +C+ +A + + A L + L+D T L
Sbjct: 128 KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIIT 187
Query: 142 -----MWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTS 196
+A K + ++ + + + L
Sbjct: 188 SGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 247
Query: 197 SLEIPNAQ---GLTPFML 211
+ NAQ G T +
Sbjct: 248 IANMLNAQDSNGDTCLNI 265
Score = 32.3 bits (72), Expect = 0.14
Identities = 16/104 (15%), Positives = 30/104 (28%)
Query: 108 IHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQ 167
+ + + L N N + + ++ + + I
Sbjct: 43 LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 102
Query: 168 DKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFML 211
HGN LHW N + LV H S+ + G + +
Sbjct: 103 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK 146
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 75.1 bits (183), Expect = 2e-15
Identities = 25/110 (22%), Positives = 44/110 (40%)
Query: 42 HWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMD 101
+ + +++ G I D T LH A +G+ + + LLIQ D + D
Sbjct: 170 RKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229
Query: 102 SEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSL 151
+G T +H AA +G LV ++ ++ G TA + +
Sbjct: 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGY 279
Score = 61.3 bits (147), Expect = 6e-11
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 43/252 (17%)
Query: 20 VGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWAT 79
V + +E G D+N + + +T LH A I++ ++++K+ + GA ++ + PLH A
Sbjct: 56 VLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE-GWIPLHAAA 114
Query: 80 RQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHT---------------------- 117
G+LD LI GA ++SEG T + A +
Sbjct: 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE 174
Query: 118 -----RIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHG 172
+L + IN ++G TAL +A K + +LLI I+D G
Sbjct: 175 RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK-GYTEVLKLLIQARYDVNIKDY-DG 232
Query: 173 NVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEENIGAPWLGKATVDKITEL 232
LH A + A LV + +E N G T F + +E+I + + EL
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI---------LGYLEEL 283
Query: 233 KDHYNTQQNIIH 244
+ +QN++H
Sbjct: 284 Q----KKQNLLH 291
Score = 52.8 bits (125), Expect = 3e-08
Identities = 41/198 (20%), Positives = 69/198 (34%), Gaps = 26/198 (13%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
+ A + E + + +GA ++ D T LH A ++D V L+++GA+
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGL-TALHQACIDDNVDMVKFLVENGANIN 100
Query: 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLI 158
D+EG +H AA G+ I YL+++G +V + G T L + + +
Sbjct: 101 QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160
Query: 159 TFGASTTIQDK-------------------------IHGNVALHWAIYAKNHVAITTLVS 193
G K G ALH A + L+
Sbjct: 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ 220
Query: 194 HTSSLEIPNAQGLTPFML 211
+ I + G TP
Sbjct: 221 ARYDVNIKDYDGWTPLHA 238
Score = 52.8 bits (125), Expect = 3e-08
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 72 ATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVN 131
A G + V+ L++ GAD + +G T +HQA + +V +LV G N+N
Sbjct: 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN 100
Query: 132 LQDRNGMTALMWSAYKVFSLDPTRL 156
D G L +A + L
Sbjct: 101 QPDNEGWIPLHAAASCGYLDIAEYL 125
Score = 47.0 bits (110), Expect = 3e-06
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 103 EGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYK 147
+ A G T V L+ +G ++N + +G+TAL +
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID 83
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 71.3 bits (173), Expect = 3e-14
Identities = 24/101 (23%), Positives = 42/101 (41%)
Query: 23 CVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQG 82
+ + + T LH+AA + + I+KY + + + TP+ A ++G
Sbjct: 173 DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 232
Query: 83 HLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYL 123
++ V+ LIQ GA +D+ T A H IV
Sbjct: 233 RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 273
Score = 59.7 bits (143), Expect = 2e-10
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 73 TPLHWATRQGHLDSVVLLIQ-HGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVN 131
T LH+A + ++ V L+ G++ D +G T I AAQ G +V YL+ +G +V
Sbjct: 189 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 248
Query: 132 LQDRNGMTALMWSAYK 147
D TA +
Sbjct: 249 AVDATDHTARQLAQAN 264
Score = 58.2 bits (139), Expect = 5e-10
Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 16/215 (7%)
Query: 15 LTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATP 74
L +C+ AG DVN D + T L A + R ++ Y + GA ++
Sbjct: 52 LIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 111
Query: 75 LHWATRQGHLDSVVLLIQHGADPTLMD--------------SEGSTCIHQAAQFGHTRIV 120
H A +V ++ ++ +A+ +
Sbjct: 112 -HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGA 170
Query: 121 AYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAI 180
+ + G TAL ++A L+ G++ QD+ G + A
Sbjct: 171 KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE-DGKTPIMLAA 229
Query: 181 YAKNHVAITTLVSHTSSLEIPNAQGLTPFMLLEEN 215
+ L+ +S+E +A T L + N
Sbjct: 230 QEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 264
Score = 55.1 bits (131), Expect = 5e-09
Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ + + + E G + ++ D + T + AA RIE++ Y I QG
Sbjct: 185 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG 244
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQ 92
A V+A+ T A H + V + +
Sbjct: 245 ASVEAVDATDH-TARQLAQANNHHNIVDIFDR 275
Score = 50.9 bits (120), Expect = 2e-07
Identities = 23/109 (21%), Positives = 32/109 (29%), Gaps = 30/109 (27%)
Query: 36 ETVTLLHWAAINNRIEIMKYFISQGA-IVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG 94
E+ LH A + I + + I+D T LHW + LI H
Sbjct: 1 ESPIKLHTEAAGS-YAITEPITRESVNIIDPRHNR---TVLHWIASNSSAEKSEDLIVHE 56
Query: 95 ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMW 143
A +A G +VN D + T LM
Sbjct: 57 AK-------------------------ECIAAGADVNAMDCDENTPLML 80
Score = 39.7 bits (91), Expect = 6e-04
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 10/86 (11%)
Query: 103 EGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAY-------KVFSLDPTR 155
E +H A G I + + +N+ R+ T L W A + + +
Sbjct: 1 ESPIKLHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAK 58
Query: 156 LLITFGASTTIQDKIHGNVALHWAIY 181
I GA D N L A+
Sbjct: 59 ECIAAGADVNAMDC-DENTPLMLAVL 83
Score = 27.4 bits (59), Expect = 5.3
Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 10/90 (11%)
Query: 139 TALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSL 198
+ + S T + + I D H LHW + L+ H +
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVN--IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 199 EI--------PNAQGLTPFMLLEENIGAPW 220
I + TP ML
Sbjct: 60 CIAAGADVNAMDCDENTPLMLAVLARRRRL 89
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 64.3 bits (155), Expect = 5e-12
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 20 VGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWAT 79
+ + + + + T LH A I+ E+++ GA ++ TPLH A
Sbjct: 141 EPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAV 200
Query: 80 RQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKG 127
+ LL++ GADPT G T + A + + L A G
Sbjct: 201 EAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248
Score = 62.0 bits (149), Expect = 2e-11
Identities = 26/149 (17%), Positives = 43/149 (28%), Gaps = 2/149 (1%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAI--GGDLQATPLHWATRQGHLDSVVLLIQHGAD 96
T LH A I+ + + + A + + DL T LH A G +V L GA
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 97 PTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRL 156
+ + G T +H A + L+ + + S P +
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 157 LITFGASTTIQDKIHGNVALHWAIYAKNH 185
+ + A H
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYDGH 159
Score = 58.2 bits (139), Expect = 4e-10
Identities = 31/213 (14%), Positives = 55/213 (25%), Gaps = 49/213 (23%)
Query: 29 DVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVV 88
++ + T LH AAI ++ + GA V T LH A R
Sbjct: 37 YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERG-GHTALHLACRVRAHTCAC 95
Query: 89 LLIQHGADPTLMDSEG--------------STCIHQAAQFGHTRIVAYLVAKGINVNLQD 134
+L+Q S+ + + + + ++
Sbjct: 96 VLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN 155
Query: 135 RNGMTALMWSAY---------------------------------KVFSLDPTRLLITFG 161
+G T L + + + LL+ G
Sbjct: 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215
Query: 162 ASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH 194
A T + G L A+ N + L +H
Sbjct: 216 ADPTARMY-GGRTPLGSALLRPNPILARLLRAH 247
Score = 58.2 bits (139), Expect = 5e-10
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 1/130 (0%)
Query: 33 PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQ 92
PD+ + N E ++A D + +L
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180
Query: 93 HGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLD 152
+ G T +H A + ++ L+ G + + G T L + + +
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR-PNPI 239
Query: 153 PTRLLITFGA 162
RLL GA
Sbjct: 240 LARLLRAHGA 249
Score = 55.9 bits (133), Expect = 2e-09
Identities = 34/154 (22%), Positives = 48/154 (31%), Gaps = 17/154 (11%)
Query: 73 TPLHWATRQGHLDSVVLLIQHGADPTLM---DSEGSTCIHQAAQFGHTRIVAYLVAKGIN 129
T LH A H + L+ A + + G T +H AA G V L A G
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 130 VNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDK---------IHGNVALHWAI 180
V + +R G TAL A +V + +L+ S + + A
Sbjct: 71 VLVAERGGHTALHL-ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129
Query: 181 YA----KNHVAITTLVSHTSSLEIPNAQGLTPFM 210
+ LE N G TP
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163
Score = 52.0 bits (123), Expect = 5e-08
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGAD 96
T LH A +++ + GA A + TPL A + + LL HGA
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMYGGR-TPLGSALLRPNPILARLLRAHGAP 250
Score = 50.9 bits (120), Expect = 1e-07
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 101 DSEGSTCIHQAAQFGHTRIVAYLVAKGIN---VNLQDRNGMTALMWSAYKVFSLDPTRLL 157
+G T +H A H + +L+ ++LQ+ G TAL +A + +L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 158 ITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTP 208
+ H + H A + H L+ S +
Sbjct: 66 AAGAGVLVAERGGHTAL--HLACRVRAHTCACVLLQPRPSHPRDASDTYLT 114
Score = 42.8 bits (99), Expect = 6e-05
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGA 61
++AG D T L A + + + + GA
Sbjct: 212 LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 57.3 bits (137), Expect = 2e-10
Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 12/155 (7%)
Query: 34 DSETVTLLHWAAINNRIEIMKYFISQGAIVDA-----IGGDLQATPLHWATR---QGHLD 85
+ + L A I + + G + G + T LH A R + L
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 86 SVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSA 145
V L+Q+ + +GST +H + + L+ ++ + + +G T L +
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122
Query: 146 YKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAI 180
LL + + H +V W +
Sbjct: 123 RL-KHEHCEELLTQALSG---RFNSHVHVEYEWRL 153
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 58.0 bits (138), Expect = 4e-10
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 42 HWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMD 101
H A+I+ + I++ +S GA V+A T LH A + D V LL++ GAD +
Sbjct: 116 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 175
Query: 102 SEGSTCIHQAAQFGHTRIVAYLVAKGIN 129
+G + TRI L +
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 53.0 bits (125), Expect = 2e-08
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 10/186 (5%)
Query: 39 TLLHWAAINNRI----EIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG 94
+ LH A I+ E+++ A ++ Q TPLH A + L+ G
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-QQTPLHLAVITNQPEIAEALLGAG 62
Query: 95 ADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTA-----LMWSAYKVF 149
DP L D G+T +H A + G V L +L T + A
Sbjct: 63 CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122
Query: 150 SLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPNAQGLTPF 209
L LL++ GA Q+ +G ALH A+ +N ++ L+ + + QG +P+
Sbjct: 123 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY 182
Query: 210 MLLEEN 215
L
Sbjct: 183 QLTWGR 188
Score = 43.3 bits (100), Expect = 3e-05
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
T LH A +++ + GA V+ + +P + L Q +
Sbjct: 147 TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY-SPYQLTWGRPSTRIQQQLGQLTLENL 205
Query: 99 LMDSE 103
M E
Sbjct: 206 QMLPE 210
Score = 43.3 bits (100), Expect = 3e-05
Identities = 37/187 (19%), Positives = 58/187 (31%), Gaps = 8/187 (4%)
Query: 14 ELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQAT 73
LT + + +N ++ T LH A I N+ EI + + G +
Sbjct: 16 ALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 75
Query: 74 PLHW-----ATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKG- 127
G L + + G TC+H A+ G+ IV LV+ G
Sbjct: 76 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA 135
Query: 128 INVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVA 187
+ NG TAL + + + D LL+ GA G +
Sbjct: 136 DVNAQEPCNGRTALHLA-VDLQNPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGRPSTRI 193
Query: 188 ITTLVSH 194
L
Sbjct: 194 QQQLGQL 200
Score = 42.6 bits (98), Expect = 6e-05
Identities = 7/45 (15%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Query: 103 EGSTCIHQAAQFGHTRIVAYLV----AKGINVNLQDRNGMTALMW 143
+G + +H A + ++ +N Q+ T L
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHL 45
Score = 41.8 bits (96), Expect = 1e-04
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 74 PLHWATRQGHLDSVVLLIQHGADP-TLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNL 132
LH A+ G+L V LL+ GAD G T +H A + +V+ L+ G +VN
Sbjct: 114 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 173
Query: 133 QDRNGMTALMWSAYKVFSLDPTRLLITFGAS 163
G + + + S + L
Sbjct: 174 VTYQGYSPYQLTWGR-PSTRIQQQLGQLTLE 203
Score = 27.9 bits (60), Expect = 2.7
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 136 NGMTALMWSAY---KVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNH 185
+G + L + K +++ R + A Q+ LH A+
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQP 52
Score = 26.4 bits (56), Expect = 9.3
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 4/43 (9%)
Query: 172 GNVALHWAIYAKNHVA----ITTLVSHTSSLEIPNAQGLTPFM 210
G+ LH AI + I + + L N TP
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLH 44
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 57.5 bits (137), Expect = 5e-10
Identities = 34/147 (23%), Positives = 60/147 (40%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ + D+ + + +T LH A E ++ + +G
Sbjct: 74 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 133
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIV 120
A +DA+ +PL A L V LL+QHGA+ GS+ +H A+ G +V
Sbjct: 134 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV 193
Query: 121 AYLVAKGINVNLQDRNGMTALMWSAYK 147
LV G + +L++ + T LM + +
Sbjct: 194 RTLVRSGADSSLKNCHNDTPLMVARSR 220
Score = 56.0 bits (133), Expect = 2e-09
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 41 LHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLM 100
L A NN + +++ + GA V+A + LH A+ +G L V L++ GAD +L
Sbjct: 148 LIHAVENNSLSMVQLLLQHGANVNAQMYSGS-SALHSASGRGLLPLVRTLVRSGADSSLK 206
Query: 101 DSEGSTCIHQAAQFGHTRIV 120
+ T + A I+
Sbjct: 207 NCHNDTPLMVARSRRVIDIL 226
Score = 50.6 bits (119), Expect = 1e-07
Identities = 43/206 (20%), Positives = 76/206 (36%), Gaps = 6/206 (2%)
Query: 14 ELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQAT 73
V + G++++ ++ T LH A I +++ ++ GA A+ Q
Sbjct: 17 PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 76
Query: 74 PLHWATRQGHLDSVVLLIQHGADPTLMDS----EGSTCIHQAAQFGHTRIVAYLVAKGIN 129
H A + L+ A TL +G T +H A V L+ +G +
Sbjct: 77 A-HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD 135
Query: 130 VNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAIT 189
++ D + + A + SL +LL+ G + G+ ALH A +
Sbjct: 136 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVR 194
Query: 190 TLVSHTSSLEIPNAQGLTPFMLLEEN 215
TLV + + N TP M+
Sbjct: 195 TLVRSGADSSLKNCHNDTPLMVARSR 220
Score = 43.3 bits (100), Expect = 3e-05
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 73 TPLHWATRQGHLDSVVLLI----QHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGI 128
TPLH A QG+L +V L+ Q G + + ++ T +H A +V LV G
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 129 NVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNH 185
+ A + S R L+ A T+ + L A N
Sbjct: 65 SPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120
Score = 42.5 bits (98), Expect = 6e-05
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 103 EGSTCIHQAAQFGHTRIVAYLV----AKGINVNLQDRNGMTALMWSAYK 147
+G T +H A G+ V LV G +++ + T L +
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50
Score = 32.1 bits (71), Expect = 0.13
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 24 VEAGQDVNEPDSETVTLLHWAAINNRIEIMK 54
V +G D + + T L A I+I++
Sbjct: 197 VRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 56.7 bits (135), Expect = 9e-10
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
M + V + A D+N D+ T LHWAA N E + +
Sbjct: 87 MHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHH 146
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIV 120
A DA + TPL A R+G ++ L+ + A+ + D A++ H IV
Sbjct: 147 ANRDAQDDKDE-TPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIV 205
Query: 121 AYL 123
L
Sbjct: 206 RLL 208
Score = 54.0 bits (128), Expect = 6e-09
Identities = 35/193 (18%), Positives = 66/193 (34%), Gaps = 3/193 (1%)
Query: 24 VEAGQDVNE-PDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQG 82
+ G ++N D T LH AA R + K + GA ++ +
Sbjct: 9 LAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADA 68
Query: 83 HLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALM 142
+LL + +G+T + AA+ +V L+ ++N D +G TAL
Sbjct: 69 MGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALH 128
Query: 143 WSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSHTSSLEIPN 202
W + ++ + L A ++ A L+ + ++ EI +
Sbjct: 129 W--AAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITD 186
Query: 203 AQGLTPFMLLEEN 215
P + E
Sbjct: 187 HMDRLPRDVASER 199
Score = 46.7 bits (109), Expect = 2e-06
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 1/147 (0%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ + VF ++N + T L AA +++ I+
Sbjct: 54 NTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITAD 113
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIV 120
A ++A + T LHWA + ++V +L+ H A+ D + T + AA+ G
Sbjct: 114 ADINAADNSGK-TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS 172
Query: 121 AYLVAKGINVNLQDRNGMTALMWSAYK 147
L+ N + D ++ +
Sbjct: 173 KALLDNFANREITDHMDRLPRDVASER 199
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 51.4 bits (121), Expect = 6e-08
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ + +E G V D LH AA +++++ G
Sbjct: 102 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 161
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLI-QHGADPTLMDSEGSTCIHQAAQFGHTRI 119
TPL A +GH D+ VLL+ ++GA+ L+D++G+ A + ++
Sbjct: 162 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQV 218
Query: 120 VAYLVAKGIN 129
+ + ++
Sbjct: 219 KKFFLNNVVD 228
Score = 51.0 bits (120), Expect = 1e-07
Identities = 28/209 (13%), Positives = 57/209 (27%), Gaps = 38/209 (18%)
Query: 41 LHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLM 100
LH A + N ++ + + PLHW+ + L+ + L
Sbjct: 4 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63
Query: 101 DSEG--------------------------------------STCIHQAAQFGHTRIVAY 122
D TC+H A + +
Sbjct: 64 DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 123
Query: 123 LVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYA 182
L+ G +V ++D+ L +A L ++ QDK H
Sbjct: 124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 183
Query: 183 KNHVAITTLVSHTSSLEIPNAQGLTPFML 211
A+ + + + ++ + +G +
Sbjct: 184 HGDAAVLLVEKYGAEYDLVDNKGAKAEDV 212
Score = 50.6 bits (119), Expect = 1e-07
Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 4/143 (2%)
Query: 73 TPLHWATRQGHLDSVV-LLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVN 131
PLH A + V LL + D +G +H + F I ++L++K NVN
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 132 LQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAI--- 188
L D + + + + N + A
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121
Query: 189 TTLVSHTSSLEIPNAQGLTPFML 211
L+ + +S+ I + P
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHR 144
Score = 44.4 bits (103), Expect = 1e-05
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
T LH A E+ ++ I GA V Q PLH A G L + LL G
Sbjct: 107 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQ-IPLHRAASVGSLKLIELLCGLGKSAV 165
Query: 99 LM-DSEGSTCIHQAAQFGHTRIVAYLVAK-GINVNLQDRNGMTALMWSAYKVFSLDPTRL 156
D +G T + A GH LV K G +L D G A + + +
Sbjct: 166 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE----QVKKF 221
Query: 157 LITFGA 162
+
Sbjct: 222 FLNNVV 227
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 45.0 bits (105), Expect = 2e-06
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
LL +++ ++++ I + + T LH A GH + V L+Q G +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGM---TALMWSAYKVFSLDPTR 155
DS+G T +H AA + ++ +LV G V + M + + ++
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY-TQCSQ 120
Query: 156 LLITFGA 162
L
Sbjct: 121 FLYGVQE 127
Score = 43.9 bits (102), Expect = 5e-06
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 73 TPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNL 132
L ++ +G D V +I DP+L + EG T +H A GHT IV +LV G+NVN
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 133 QDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKN-HVAITTL 191
D +G T + A ++ + L+ GA+ A + + +
Sbjct: 63 ADSDGWTP-LHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 42.9 bits (99), Expect = 2e-05
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 3/143 (2%)
Query: 73 TPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNL 132
L A R G D V +L+ +GA T D G++ +H AAQ+GH L+ G++ +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62
Query: 133 QDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTLV 192
+ + T ++ + + ALHWA + + L+
Sbjct: 63 RTKVDRT--PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120
Query: 193 SHTSSLEIPNAQGLTPFMLLEEN 215
+ + + + T F + +N
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDN 143
Score = 41.4 bits (95), Expect = 6e-05
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 31/140 (22%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIG------------------------------- 67
L AA + + ++ ++ GA
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 68 GDLQATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKG 127
+ TPLH A +GH + V +L++HGAD D T +H A + H +V L+ G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 128 INVNLQDRNGMTALMWSAYK 147
+V+ Q + TA S
Sbjct: 124 ADVHTQSKFCKTAFDISIDN 143
Score = 36.0 bits (81), Expect = 0.004
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 75 LHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYL 123
LHWAT H + V LLI++GAD T + G+ + L
Sbjct: 104 LHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 32.1 bits (71), Expect = 0.078
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ R + E V ++ G DVN D +T LHWA +N E+++ I G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLL 90
A V + T + G+ D +L
Sbjct: 124 ADVHTQSKFCK-TAFDISIDNGNEDLAEIL 152
Score = 29.4 bits (64), Expect = 0.65
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 103 EGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMW 143
+ + +AA+ G V L+A G D G + L
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHL 40
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 41.7 bits (96), Expect = 5e-05
Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 6/155 (3%)
Query: 41 LHWAAINNRIEIMKYFI-SQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTL 99
L AA ++ ++ + + DA+ + G + L++ GA P +
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDAL--NRFGKTALQVMMFGSTAIALELLKQGASPNV 63
Query: 100 MDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLIT 159
D+ G++ +H AA+ G + LV G +VN+ D G + + + + + L
Sbjct: 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123
Query: 160 FGASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH 194
+ +D G L A+ + L H
Sbjct: 124 --SDLHRRDA-RGLTPLELALQRGAQDLVDILQGH 155
Score = 38.3 bits (87), Expect = 7e-04
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 6/95 (6%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
+ + VE G DVN PD +H A ++ + ++
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124
Query: 61 AI--VDAIGGDLQATPLHWATRQGHLDSVVLLIQH 93
+ DA G TPL A ++G D V +L H
Sbjct: 125 DLHRRDARG----LTPLELALQRGAQDLVDILQGH 155
Score = 30.2 bits (66), Expect = 0.36
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 25 EAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHL 84
+ + T + + + + + +P+H A R G L
Sbjct: 24 RELVHPDALNRFGKT--ALQVMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81
Query: 85 DSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWS 144
D++ +L++HGAD + D G+ IH A Q GHT +V++L A+ +++ +D G+T L +
Sbjct: 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES-DLHRRDARGLTPLELA 140
Query: 145 AYK 147
+
Sbjct: 141 LQR 143
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 41.8 bits (96), Expect = 5e-05
Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 41 LHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPTLM 100
L AA +E + + V+A G + + + + GA+P L
Sbjct: 5 LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL--LLRGANPDLK 62
Query: 101 DSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKVFSLDPTRLLITF 160
D G IH AA+ G + L+ +VN++D G L +A + L+
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 161 GASTTIQDKIHGNVALHWAIYAKNHVAITTLVSH 194
++ ++ G+ A A + ++ + ++
Sbjct: 123 ASNVGHRNH-KGDTACDLARLYGRNEVVSLMQAN 155
Score = 37.9 bits (86), Expect = 0.001
Identities = 8/44 (18%), Positives = 16/44 (36%)
Query: 73 TPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGH 116
L A +G L+ + L+Q+ + + G T +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNP 46
Score = 32.9 bits (73), Expect = 0.043
Identities = 18/94 (19%), Positives = 31/94 (32%)
Query: 1 MEHWRGVKNWYEFELTKVFVGKCVEAGQDVNEPDSETVTLLHWAAINNRIEIMKYFISQG 60
V + + +E DVN D+E LH AA + ++++ +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 61 AIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHG 94
A T A G + V L+ +G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 31.0 bits (68), Expect = 0.18
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 101 DSEGSTCIHQAAQFGHTRIVAYLVAKG 127
+ +G T A +G +V+ + A G
Sbjct: 130 NHKGDTACDLARLYGRNEVVSLMQANG 156
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 33.4 bits (74), Expect = 0.020
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 1/109 (0%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
L AA R+E ++ + GA +A P+ + +LL+
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAPNSY-GRRPIQVMMMGSARVAELLLLHGAEPNC 63
Query: 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYK 147
+ + +H AA+ G + L G ++++D G + +
Sbjct: 64 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 112
Score = 33.4 bits (74), Expect = 0.022
Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 2/122 (1%)
Query: 72 ATPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVN 131
A L A +G ++ V L++ GA+P +S G I L+
Sbjct: 4 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNC 63
Query: 132 LQDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWAIYAKNHVAITTL 191
+ +A + F L G + + A + L
Sbjct: 64 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA--WGRLPVDLAEELGHRDVARYL 121
Query: 192 VS 193
+
Sbjct: 122 RA 123
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 32.2 bits (71), Expect = 0.059
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 39 TLLHWAAINNRIEIMKYFISQGAIVDAIGGDLQATPLHWATRQGHLDSVVLLIQHGADPT 98
WA N ++ +K ++++G V+ PLH+A G L+ + L+ GAD
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 99 LMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNLQDRNGMTALMWSAYKV 148
D T + A GH V L++KG + ++ +G+TAL + +
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQA 112
Score = 31.0 bits (68), Expect = 0.12
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 73 TPLHWATRQGHLDSVVLLIQHGADPTLMDSEGSTCIHQAAQFGHTRIVAYLVAKGINVNL 132
WA + G LD V + G D G +H AA G I+ +L+ KG ++N
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 133 QDRNGMTALMWSAYKVFSLDPTRLLITFGASTTIQDKIHGNVALHWA 179
D++ +T L+ + Y+ +LL++ GA T++ G AL
Sbjct: 64 PDKHHITPLLSAVYEGHV-SCVKLLLSKGADKTVKGP-DGLTALEAT 108
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger
domain-containing protein 1 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 56
Score = 28.5 bits (64), Expect = 0.23
Identities = 8/31 (25%), Positives = 10/31 (32%), Gaps = 2/31 (6%)
Query: 387 FCSTCLVRKPIRSKHCSICNRCVAK--FDHH 415
C C + HC CN C+ H
Sbjct: 22 SCGICRIGPKEDFFHCLKCNLCLTTNLRGKH 52
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 155
Score = 28.0 bits (61), Expect = 1.8
Identities = 10/85 (11%), Positives = 22/85 (25%), Gaps = 2/85 (2%)
Query: 361 VITAPQDEKFRYIIELAERGTFEPLSFCSTC--LVRKPIRSKHCSICNRCVAKFDHHCPW 418
+ ++E+F + L + F L FC T + +
Sbjct: 8 YVEVNENERFEALCRLLKNKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQR 67
Query: 419 VGNCIGAKNHKYFVGYISSLLFMCC 443
K K + + ++
Sbjct: 68 EKVIRLFKQKKIRILIATDVMSRGI 92
>d2ds5a1 g.39.1.11 (A:11-48) ClpX chaperone zinc binding domain
{Escherichia coli [TaxId: 562]}
Length = 38
Score = 25.7 bits (57), Expect = 1.9
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Query: 385 LSFCSTC-----LVRKPIRSKHCSICNRCV 409
L +CS C VRK I IC+ CV
Sbjct: 1 LLYCSFCGKSQHEVRKLIAGPSVYICDECV 30
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1
{Thermotoga maritima [TaxId: 2336]}
Length = 333
Score = 28.5 bits (63), Expect = 2.2
Identities = 10/98 (10%), Positives = 18/98 (18%), Gaps = 8/98 (8%)
Query: 387 FCSTCLVRKPIRSKHCS-ICNRCVAKFDHHCPWVGNCIGAKNHKYFVGYISSLLFMCCFV 445
+ + R ++ W + F+
Sbjct: 89 IVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGG-IREVVFFVKGKN 147
Query: 446 LYGIAKYWKSKCQFQLS------HEREVMFVVWDMLQC 477
YGI KY + Q +L
Sbjct: 148 AYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPE 185
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId:
9606]}
Length = 89
Score = 26.6 bits (59), Expect = 2.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 15 LTKVFVGKCVEAGQDVNEPDSET 37
++KVFVG+ VE DV E E
Sbjct: 45 ISKVFVGEVVEEALDVCEKWGEM 67
>d1b48a1 a.45.1.1 (A:80-222) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 143
Score = 27.4 bits (60), Expect = 3.3
Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Query: 365 PQDEKFRYIIELAERGTFEPLSFCSTCLVRKPIRSKHCSICNRCVAKFDHHCPWVGNCIG 424
+D K R I++ GT + + + K + K S + P +
Sbjct: 4 GKDLKERVRIDMYADGTQDLMMMIAV-APFKTPKEKEESYDLILSRAKTRYFPVFEKILK 62
Query: 425 AKNHKYFVGYISSLLFMCCFVLYGIAKYWKSKCQFQLSHEREVM 468
+ VG S + + + + +
Sbjct: 63 DHGEAFLVGNQLSWADIQLLEAILMVEELSAPVLSDFPLLQAFK 106
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 25.8 bits (56), Expect = 4.3
Identities = 9/50 (18%), Positives = 11/50 (22%), Gaps = 13/50 (26%)
Query: 379 RGTFEPLSFCSTCLVRKPIRSK------HCSICN-----RCVAKFDHHCP 417
G + C+ C K S C C C C
Sbjct: 32 EGNLPVSAKCTVC--DKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCS 79
>d2nr9a1 f.51.1.1 (A:4-192) GlpG homolog HI0618 {Haemophilus
influenzae [TaxId: 727]}
Length = 189
Score = 27.1 bits (59), Expect = 5.1
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Query: 270 FIFQAQIAYMAKLALFISLYIVMQVIGTVMFDERLFKILPLPVYFATKFWIYITWLFWIT 329
F+ Q + AL + +YI Q+ + P ++ W YI+
Sbjct: 1 FLAQQGKITLILTALCVLIYIAQQLGFEDDIMYLMH--YPAYEEQDSEVWRYISHTLVHL 58
Query: 330 PVVNFFVSLLFFSTSGVLWYNFIKCWKGDPGVITA 364
++ +L +F G + K + A
Sbjct: 59 SNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVA 93
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}
Length = 174
Score = 26.8 bits (58), Expect = 6.3
Identities = 5/34 (14%), Positives = 13/34 (38%)
Query: 459 FQLSHEREVMFVVWDMLQCDGWVGFILLNAFVHA 492
++LSH +++ + DG+ +
Sbjct: 111 YRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQH 144
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase
{Thermotoga maritima [TaxId: 2336]}
Length = 157
Score = 26.4 bits (57), Expect = 6.5
Identities = 18/119 (15%), Positives = 36/119 (30%), Gaps = 9/119 (7%)
Query: 396 PIRSKHCSICNRCVAKFDH------HCPWVGNCIGAKNHKYFVGYISSLLFMCCFVLYGI 449
PI H I R ++ FD P + K + + S L ++
Sbjct: 11 PITLGHVDIIKRALSIFDELVVLVTENPRKKCMFTLEERKKLIEEVLSDLDGVKVDVHHG 70
Query: 450 AKYWKSKCQFQLSHEREVMFVVWDMLQCDGWVGFILLNAFVHAIWITVLLSCQLYQIIS 508
K R + V + + L + + ++ L++ + + IS
Sbjct: 71 LLVDYLKKHGIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVF---LIASEKFSFIS 126
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 59
Score = 24.8 bits (54), Expect = 6.8
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 2/34 (5%)
Query: 383 EPLSFCSTCLVRKPIRSKHCSICNRCVAKFDHHC 416
FC C ++ +H +C C F C
Sbjct: 13 NGERFCYGCQ--GELKDQHVYVCAVCQNVFCVDC 44
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein
5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 175
Score = 26.2 bits (57), Expect = 7.8
Identities = 5/34 (14%), Positives = 10/34 (29%)
Query: 459 FQLSHEREVMFVVWDMLQCDGWVGFILLNAFVHA 492
L + + DG G +L++
Sbjct: 109 LILREGGAELTLYLHHCMADGHHGAVLVDELFSR 142
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.328 0.140 0.461
Gapped
Lambda K H
0.267 0.0522 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,325,853
Number of extensions: 111616
Number of successful extensions: 608
Number of sequences better than 10.0: 1
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 142
Length of query: 584
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 494
Effective length of database: 1,171,896
Effective search space: 578916624
Effective search space used: 578916624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.4 bits)