RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9493
         (175 letters)



>d1ov2a_ a.13.1.1 (A:) alpha-2-Macroglobulin receptor associated
           protein (RAP) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 82

 Score = 95.6 bits (238), Expect = 4e-27
 Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 48  FRMGKLNLLWKKAQ-VRLSEPKLKSIYNELKIHDKEEILFKKVKADGLDPDGQREGILRK 106
           FRM KLN LW+KAQ + L   +L  ++ +LKI +++E+ +KK+K DGLD DG++E  L +
Sbjct: 4   FRMEKLNQLWEKAQRLHLPPVRLAELHADLKIQERDELAWKKLKLDGLDEDGEKEARLIR 63

Query: 107 RLVGIMSTYGLLEHFEDIQ 125
            L  I++ YGL    +  Q
Sbjct: 64  NLNVILAKYGLDGKKDARQ 82


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.137    0.396 

Gapped
Lambda     K      H
   0.267   0.0602    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 643,898
Number of extensions: 29908
Number of successful extensions: 66
Number of sequences better than 10.0: 1
Number of HSP's gapped: 65
Number of HSP's successfully gapped: 6
Length of query: 175
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 96
Effective length of database: 1,322,926
Effective search space: 127000896
Effective search space used: 127000896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.3 bits)