BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9494
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 41/239 (17%)
Query: 16 SVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSG 75
++ TKK N+ I+LNRPDK+NA+N K L+ L + + E D E + I+ G+ FC+G
Sbjct: 5 TIETKKEGNLFWITLNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKGKAFCAG 64
Query: 76 FDLHELDE-NPDT--KLFDDFREFLQK--PAKKPIIAAITGYAVGQGLDLALWCDLRFVE 130
D+ + ++ P K RE + K KP IA I GYA+G GL+LAL CD+R
Sbjct: 65 ADITQFNQLTPAEAWKFSKKGREIMDKIEALSKPTIAMINGYALGGGLELALACDIRIAA 124
Query: 131 ENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRL 190
E +G P +L I +RL
Sbjct: 125 EEAQLGL------------------------PEI------------NLGIYPGYGGTQRL 148
Query: 191 GQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
++IG R ++M+ G I ++A +GL N++V E A +++K S LA
Sbjct: 149 TRVIGKGRALEMMMTGDRIPGKDAEKYGLVNRVVPLANLEQETRKLAEKIAKKSPISLA 207
>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium
discoideum GN=echs1 PE=3 SV=1
Length = 277
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 112/235 (47%), Gaps = 41/235 (17%)
Query: 19 TKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDL 78
T+K + L++LNRP +NA++ + + +K F++D + I+ G E F +G D+
Sbjct: 28 TEKKGRVGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADI 87
Query: 79 HELDEN--PDTKLFDDFREF--LQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
E+++ PD D ++ L K +KPIIAA+ GYA+G G +LA+ CD+ E +
Sbjct: 88 KEMEKVTLPDAYNNDLLAQWHDLTK-IRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAV 146
Query: 135 MGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMI 194
G P +L IP C T +RL + I
Sbjct: 147 FG------------------------QPEIKLG-----------TIPGCGGT-QRLIRAI 170
Query: 195 GTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
G S+ M+++ G ++TA EA GL +K+V + EA A +++ SQ +A
Sbjct: 171 GKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKMAEKIASYSQLTVA 225
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ +I+LNRP +NA+N + ++ + K + D + ++ G F +G D+ E+
Sbjct: 14 VGIITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGSPKVFAAGADIKEMASL 73
Query: 85 PDTKLFD-DFREFLQKPA--KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
T FD DF K A + P+IAA+ GYA+G G +LA+ CDL + G
Sbjct: 74 TFTDAFDADFFSAWGKLAAVRTPMIAAVAGYALGGGCELAMMCDLLIAADTAKFG----- 128
Query: 142 FVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
+ ++K + + +RL + IG ++ MD
Sbjct: 129 ---------------------QPEIKLGVLPGMGGS----------QRLTRAIGKAKAMD 157
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSM--LADRATVLSECE 259
+I GR I A EA GL +++V + EA A +S++S+S +A A S
Sbjct: 158 LILTGRTIDAAEAERSGLVSRVVLADDLLPEAKAVATTISQMSRSATRMAKEAVNRSFES 217
Query: 260 TCREEWMSERKHY 272
T E + ER+ +
Sbjct: 218 TLAEGLLHERRLF 230
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 19 TKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFD 77
T K ++ LI+LNRP NA++ + L LQ I+ E ++ IL G E FC+G D
Sbjct: 8 TVKNEHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGAD 67
Query: 78 LHELDENPDTKLFDDFREFLQKPAK------KPIIAAITGYAVGQGLDLALWCDLRFVEE 131
L E + + ++ + +Q+ A +P+IAAI G A+G GL+LAL CDLR E
Sbjct: 68 LKERIKLKEDQVLESV-SLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATE 126
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLG 191
++G P T L IP T +RL
Sbjct: 127 AAVLGL------------------------PETGLA-----------IIPGAGGT-QRLP 150
Query: 192 QMIGTSRTMDMISLGRHITAREALDWGL 219
++IG + + I GR +TA EA + GL
Sbjct: 151 RLIGRGKAKEFIYTGRRVTAHEAKEIGL 178
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 47/233 (20%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
++ LI LNRP +NA+ ++ L + ++ FE+D +L G E F +G D+ E+
Sbjct: 46 SVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQ- 104
Query: 84 NPDTKLFDD--FREFLQ-----KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
+ F D +FL KKP+IAA+ GYA+G G +LA+ CD+ + E G
Sbjct: 105 ---NRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFG 161
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ LL + IP T +RL + +G
Sbjct: 162 --------QPEILLGT---------------------------IPGAGGT-QRLTRAVGK 185
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
S M+M+ G I+A++A GL +K+ T V EA+ A +++ S+ ++A
Sbjct: 186 SLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVA 238
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 57/238 (23%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHEL-- 81
+ LI LNRP +NA+ +D L + +K FE+D +L G + F +G D+ E+
Sbjct: 46 TVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQN 105
Query: 82 ---DENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDL-------RFVEE 131
+ +K + Q KKP+IAA+ GYA G G +LA+ CD+ +F +
Sbjct: 106 LSFQDCYSSKFLKHWDHLTQ--VKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQP 163
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLG 191
+L+G IP T +RL
Sbjct: 164 EILIG------------------------------------------TIPGAGGT-QRLT 180
Query: 192 QMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
+ +G S M+M+ G I+A++A GL +K+ T V EA+ A +++ S+ ++A
Sbjct: 181 RAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVA 238
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELD- 82
N+ LI LNRP +NA+ + L + ++ FE+D +L G E F +G D+ E+
Sbjct: 46 NVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTGGEKVFAAGADIKEMQS 105
Query: 83 ---ENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYN 139
+N + F + L + KKP+IAA+ GYA+G G +LA+ CD+ + E G
Sbjct: 106 LTFQNCYSGGFLSHWDQLTR-VKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFG--- 161
Query: 140 RRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRT 199
+ L+ + IP T +RL + +G S
Sbjct: 162 -----QPEILIGT---------------------------IPGAGGT-QRLTRAVGKSLA 188
Query: 200 MDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
M+M+ G I+A++A GL +K+ T V EA+ A +++ S+ + A
Sbjct: 189 MEMVLTGDRISAQDAKQAGLVSKIFPVETVVEEAIQCAEKIASNSKIVTA 238
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
N+ LI LNRP +NA+ + + L + ++ + D ++ G E F +G D+ E+
Sbjct: 44 NVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTN 103
Query: 84 NPDTKLFDDFREFLQ-----KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFY 138
N F FL KKP+IAA+ G+A+G G +LA+ CD+ + E G
Sbjct: 104 NEFATTFSG--SFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFG-- 159
Query: 139 NRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSR 198
P + IP T +R + G S
Sbjct: 160 ----------------------QPEINIG-----------TIPGAGGT-QRWARAAGKSF 185
Query: 199 TMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAM 234
M++ G H+TA+EA + G+ +K+ VGEA+
Sbjct: 186 AMEVCLTGNHVTAQEAKEHGIVSKIFPADQVVGEAV 221
>sp|P64014|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis
GN=echA6 PE=1 SV=1
Length = 243
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 47/251 (18%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHE---L 81
+ I L RP++ NA+N + ++ L + I++ D + + +L GQ FC+G DL
Sbjct: 10 VLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAI-VLTGQGTAFCAGADLSGDAFA 68
Query: 82 DENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
+ PD +L + + P P++ AI G A+G GL LA+ CDLR V + F +
Sbjct: 69 ADYPD-RLIELHKAMDASP--MPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSK 125
Query: 142 FVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
+ G+ L DN S IRRL ++G R
Sbjct: 126 Y----------GLAL---------------DNWS-----------IRRLSSLVGHGRARA 149
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLADRATVLSECETC 261
M+ +TA AL G+ N++ GT + +A A ++++L+ + VL++
Sbjct: 150 MLLSAEKLTAEIALHTGMANRI---GT-LADAQAWAAEIARLAPLAIQHAKRVLNDDGAI 205
Query: 262 REEWMSERKHY 272
E W + ++ +
Sbjct: 206 EEAWPAHKELF 216
>sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1
Length = 243
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 47/251 (18%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHE---L 81
+ I L RP++ NA+N + ++ L + I++ D + + +L GQ FC+G DL
Sbjct: 10 VLTIELQRPERRNALNSQLVEELTQAIRKAGDGSARAI-VLTGQGTAFCAGADLSGDAFA 68
Query: 82 DENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
+ PD +L + + P P++ AI G A+G GL LA+ CDLR V + F +
Sbjct: 69 ADYPD-RLIELHKAMDASP--MPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSK 125
Query: 142 FVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
+ G+ L DN S IRRL ++G R
Sbjct: 126 Y----------GLAL---------------DNWS-----------IRRLSSLVGHGRARA 149
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLADRATVLSECETC 261
M+ +TA AL G+ N++ GT + +A A ++++L+ + VL++
Sbjct: 150 MLLSAEKLTAEIALHTGMANRI---GT-LADAQAWAAEIARLAPLAIQHAKRVLNDDGAI 205
Query: 262 REEWMSERKHY 272
E W + ++ +
Sbjct: 206 EEAWPAHKELF 216
>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021)
GN=fadB1 PE=3 SV=2
Length = 257
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 111/257 (43%), Gaps = 49/257 (19%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELD-- 82
+ LI+LNRP +NA+N + L +K F+ D +L G E F +G D+ E+
Sbjct: 14 VGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAFAAGADIKEMQGL 73
Query: 83 ENPDTKLFDDFREFLQ-----KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
+ D L D FL A+KP+IAA++G+A+G G +LA+ CD E G
Sbjct: 74 DFVDGYLAD----FLGGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKFG- 128
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
P L IP + +RL + +G +
Sbjct: 129 -----------------------QPEITLG-----------VIPGMGGS-QRLTRAVGKA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLS--QSMLADRATVL 255
+ MD+I GR + A EA GL +++V + EA+ A +++ S +M+A A
Sbjct: 154 KAMDLILTGRMMDAAEAERSGLVSRVVAPDRLLEEALGAAEKIASFSLPAAMMAKEAVNR 213
Query: 256 SECETCREEWMSERKHY 272
S T E ER+ +
Sbjct: 214 SLELTLAEGLRFERRLF 230
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 57/237 (24%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHEL--- 81
+ LI LNRP +NA+ +D L + +K FE+D +L G + F +G D+ E+
Sbjct: 47 VGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL 106
Query: 82 --DENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDL-------RFVEEN 132
+ +K + Q KKP+IAA+ GYA G G +LA+ CD+ +F +
Sbjct: 107 SFQDCYSSKFLKHWDHLTQ--IKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPE 164
Query: 133 VLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQ 192
+L+G IP T +RL +
Sbjct: 165 ILIG------------------------------------------TIPGAGGT-QRLTR 181
Query: 193 MIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
+G S M+M+ G I+A++A GL +K+ T V EA+ A +++ S+ + A
Sbjct: 182 TVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIIAA 238
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 47/233 (20%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
++ LI LNRP +NA+ ++ L + ++ FE D +L G + F +G D+ E+
Sbjct: 46 SVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEMQ- 104
Query: 84 NPDTKLFDD--FREFLQ-----KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
+ F D +FL KKP+IAA+ GYA+G G +LA+ CD+ + E G
Sbjct: 105 ---NRTFQDCYSSKFLSHWDHITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFG 161
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ LL + IP T +RL + +G
Sbjct: 162 --------QPEILLGT---------------------------IPGAGGT-QRLTRAVGK 185
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
S M+M+ G I+A++A GL +K+ V EA+ A +++ S+ ++A
Sbjct: 186 SLAMEMVLTGDRISAQDAKQAGLVSKIFPVEKLVEEAIQCAEKIASNSKIVVA 238
>sp|Q8Z9L5|CAID_SALTI Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3
Length = 261
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGIVNRVVS 181
>sp|B5BL54|CAID_SALPK Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiD PE=3 SV=1
Length = 261
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGIVNRVVS 181
>sp|C0Q4L2|CAID_SALPC Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain
RKS4594) GN=caiD PE=3 SV=1
Length = 261
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGIVNRVVS 181
>sp|Q5PIL1|CAID_SALPA Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=caiD PE=3 SV=1
Length = 261
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGIVNRVVS 181
>sp|Q57TJ1|CAID_SALCH Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis (strain
SC-B67) GN=caiD PE=3 SV=1
Length = 261
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGIVNRVVS 181
>sp|B5F749|CAID_SALA4 Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483)
GN=caiD PE=3 SV=1
Length = 261
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGIVNRVVS 181
>sp|B4T6J5|CAID_SALNS Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254)
GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|Q8ZRX5|CAID_SALTY Carnitinyl-CoA dehydratase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=caiD PE=3 SV=3
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|B4TWR3|CAID_SALSV Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|B4TIG9|CAID_SALHS Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476)
GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGSGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGSGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|A9MYJ5|CAID_SALPB Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|B5FHG4|CAID_SALDC Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain
CT_02021853) GN=caiD PE=3 SV=1
Length = 261
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D EN
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR ++A EAL WG+ N++V+
Sbjct: 154 IVNEMVMTGRRMSAEEALRWGVVNRVVS 181
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ +I+LNRP +NA+N + ++ + +DD + I+ G F +G D+ E+ +
Sbjct: 14 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADL 73
Query: 85 PDTKLFD-DFREFLQKPA--KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
F DF K A + P IAA+ GYA+G G +LA+ CD+ + G
Sbjct: 74 TFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFG----- 128
Query: 142 FVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
+ ++K + + +RL + IG ++ MD
Sbjct: 129 ---------------------QPEIKLGVLPGMGGS----------QRLTRAIGKAKAMD 157
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQS 246
+I GR + A EA GL +++V + EA A +S++S S
Sbjct: 158 LILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSAS 202
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ +I+LNRP +NA+N + ++ + +DD + I+ G F +G D+ E+ +
Sbjct: 14 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADL 73
Query: 85 PDTKLFD-DFREFLQKPA--KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
F DF K A + P IAA+ GYA+G G +LA+ CD+ + G
Sbjct: 74 TFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFG----- 128
Query: 142 FVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
+ ++K + + +RL + IG ++ MD
Sbjct: 129 ---------------------QPEIKLGVLPGMGGS----------QRLTRAIGKAKAMD 157
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQS 246
+I GR + A EA GL +++V + EA A +S++S S
Sbjct: 158 LILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSAS 202
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 88/206 (42%), Gaps = 46/206 (22%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDEN-- 84
I L+RP K NAI+ KT + E RF DD +AI+ G E FC+G+DL E
Sbjct: 16 IILDRP-KANAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLKAAAEGEA 74
Query: 85 PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNR 140
PD F E KP+IAAI GYA G G +LAL D+ +N
Sbjct: 75 PDADFGAGGFAGLTELFD--LNKPVIAAINGYAFGGGFELALAADMIICSDNASFALPEA 132
Query: 141 RFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTM 200
+ + D S GV L +P+ +P V
Sbjct: 133 QLGIVPD---SGGV----LRLPKR---------------LPPAIVN-------------- 156
Query: 201 DMISLGRHITAREALDWGLCNKMVNC 226
+M+ GR + A+EAL WG+ N++V+
Sbjct: 157 EMLMTGRRMNAQEALRWGIANRVVSA 182
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 88/206 (42%), Gaps = 46/206 (22%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDEN-- 84
I L+RP K NAI+ KT + E RF DD +AI+ G E FC+G+DL E
Sbjct: 16 IILDRP-KANAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLKAAAEGEA 74
Query: 85 PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNR 140
PD F E KP+IAAI GYA G G +LAL D+ +N
Sbjct: 75 PDADFGAGGFAGLTELFD--LNKPVIAAINGYAFGGGFELALAADMIICSDNASFALPEA 132
Query: 141 RFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTM 200
+ + D S GV L +P+ +P V
Sbjct: 133 QLGIVPD---SGGV----LRLPKR---------------LPPAIVN-------------- 156
Query: 201 DMISLGRHITAREALDWGLCNKMVNC 226
+M+ GR + A+EAL WG+ N++V+
Sbjct: 157 EMLMTGRRMNAQEALRWGIANRVVSA 182
>sp|Q6NYL3|ECHP_DANRE Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1
Length = 718
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHE--- 80
++ LI+L P +NA++ A+ + ++R D + ++ G+ G FC G D+ E
Sbjct: 10 SVALITLTNP-PVNALSSAVRHAISKTMERALSDPKVTAVVICGENGRFCGGADIREFAG 68
Query: 81 -LDENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYN 139
L P L D +KP++AAI G A+G G +LAL C R Y
Sbjct: 69 PLRGPPLVPLLDAIEA-----GEKPVVAAIEGVALGGGFELALVCHYRIAH-------YK 116
Query: 140 RRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRT 199
R L +P L +P T +RL ++IG
Sbjct: 117 AR-----------------LGLPEVTLG-----------ILPAAGGT-QRLPRLIGIPAA 147
Query: 200 MDMISLGRHITAREALDWGLCNKMVNCGT 228
+++I+ GRH++A+EAL G+ +++ T
Sbjct: 148 LELITTGRHVSAQEALKLGMVDQVTEQNT 176
>sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1
Length = 261
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 103/253 (40%), Gaps = 49/253 (19%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDEN-- 84
I+L+RP K NAI+ +T A+ E F DD +AI+ G E F +G+DL E
Sbjct: 16 ITLDRP-KANAIDARTSFAMGEAFLSFRDDPHLRVAIITGAGEKFFSAGWDLKAAAEGEA 74
Query: 85 PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNR 140
PD F E KP+IAA+ GYA G G +LAL D ++
Sbjct: 75 PDADFGPGGFAGLTELFD--LNKPVIAAVNGYAFGGGFELALAADFIICADHASFALPEA 132
Query: 141 RFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTM 200
+ + D SG VL RL +++ +
Sbjct: 133 KLGIVPD----SGGVL--------------------------------RLPKILPPAIVN 156
Query: 201 DMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLADRATVLSECET 260
DM+ GR +TA EAL WG+ N++V+ + A A Q L QS A + T
Sbjct: 157 DMVMTGRRMTAEEALRWGVVNRVVSPHELLDSARELARQ---LVQSAPLAVAALKEITRT 213
Query: 261 CREEWMSERKHYI 273
R+ + E YI
Sbjct: 214 TRDMSVEEGYRYI 226
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 52/222 (23%)
Query: 14 VSSVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNF 72
+++V +K + ++++NRP +NA+N TL + I E+D+E IL G E +F
Sbjct: 3 LNNVILEKEGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSF 62
Query: 73 CSGFDLHELDENP----------DTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLAL 122
+G D+ E+ E K+F E L+KP +IAA+ G+A+G G ++A+
Sbjct: 63 VAGADISEMKEMNTIEGRKFGILGNKVFRRL-ELLEKP----VIAAVNGFALGGGCEIAM 117
Query: 123 WCDLRFVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPT 182
CD+R N G P L + P
Sbjct: 118 SCDIRIASSNARFG------------------------QPEVGLGIT-----------PG 142
Query: 183 CDVTIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
T +RL +++G +I ++I A EAL GL NK+V
Sbjct: 143 FGGT-QRLSRLVGMGMAKQLIFTAQNIKADEALRIGLVNKVV 183
>sp|Q50130|ECHA6_MYCLE Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae (strain
TN) GN=echA6 PE=3 SV=1
Length = 247
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 45/206 (21%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRF---EDDTESPLAILYGQEGNFCSGFDLHE 80
+ I L RP++ NA+N + ++ L+E +++ + + + + +L GQ FC+G DL
Sbjct: 9 GVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADLSG 68
Query: 81 ---LDENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
+ PD +L + R P P+I AI G A+G GL LA+ CDLR V + F
Sbjct: 69 DAFAADYPD-RLIELHRVMDAVP--MPVIGAINGPAIGAGLQLAMQCDLRVVAPDAYFQF 125
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
++ G+ L DN S IRRL ++G
Sbjct: 126 PTSKY----------GLAL---------------DNWS-----------IRRLSSLVGHG 149
Query: 198 RTMDMISLGRHITAREALDWGLCNKM 223
R M+ +TA AL G+ N++
Sbjct: 150 RARAMLLTAEKLTADIALQTGMANRI 175
>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12)
GN=paaF PE=1 SV=1
Length = 255
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 14 VSSVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFC 73
+S + + + L++LNRP NA+N L L ++ DT + ++ G F
Sbjct: 1 MSELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFA 60
Query: 74 SGFDLHELDENPDTKLFDDFREFL---QKPAKKPIIAAITGYAVGQGLDLALWCDLRFVE 130
+G DL+E+ E +D R L + KP+IAA+ GYA+G G +LAL CD+
Sbjct: 61 AGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAG 120
Query: 131 ENVLMGF 137
EN G
Sbjct: 121 ENARFGL 127
>sp|Q5R5M8|ECHP_PONAB Peroxisomal bifunctional enzyme OS=Pongo abelii GN=EHHADH PE=2 SV=1
Length = 723
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ LI L P +NAI+ L ++E +++ D ++ G EG F +G D+H
Sbjct: 11 LALIRLRNPP-VNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFSA- 68
Query: 85 PDTKLF--DDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRRF 142
P T F + +Q+ +KP++AAI G A G GL+LAL C R +G
Sbjct: 69 PRTFGFTLGHVVDEIQR-NEKPVVAAIQGMAFGGGLELALGCHYRIAHSEAQVGLPE--- 124
Query: 143 VYLKDSLLSSGVVLYALHVPR-TQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
V L L R TQL L ++IG +D
Sbjct: 125 -----------VTLGLLPGARGTQL-----------------------LPRLIGVPAALD 150
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMS 241
+I+ GRHI A EAL G+ +K+VN V EA+ A ++S
Sbjct: 151 LITSGRHILADEALKLGILDKVVNS-DPVEEAIRFAQRVS 189
>sp|Q8XA35|CAID_ECO57 Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3
SV=3
Length = 261
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 AIVNEMVMTGRRMGAEEALRWGIVNRVVS 181
>sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1
Length = 261
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I+L+RP K NAI+ KT + E F DD E +AI+ G E F +G+DL E
Sbjct: 13 ILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE 71
Query: 84 N--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 72 GEAPDADFGPGGFAGLTEIFD--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+ + D SG VL RL +++ +
Sbjct: 130 PEAKLGIVPD----SGGVL--------------------------------RLPKLLPPA 153
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVN 225
+M+ GR + A EAL WG+ N++V+
Sbjct: 154 IVNEMLMTGRRMDAEEALRWGIVNRVVS 181
>sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2
Length = 261
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 TIVNEMVMTGRRMGAEEALRWGIVNRVVS 181
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 AIVNEMVMTGRRMGAEEALRWGIVNRVVS 181
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 AIVNEMVMTGRRMGAEEALRWGIVNRVVS 181
>sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=caiD PE=3 SV=3
Length = 261
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 AIVNEMVMTGRRMGAEEALRWGVVNRVVS 181
>sp|Q0TLV3|CAID_ECOL5 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=caiD PE=3 SV=1
Length = 261
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 AIVNEMVMTGRRMGAEEALRWGVVNRVVS 181
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+I I+L+RP K NAI+ KT + E F DD + +AI+ G E F +G+DL
Sbjct: 12 SILEITLDRP-KANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAA 70
Query: 83 EN--PDTKL----FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
E PD F E KP+IAA+ GYA G G +LAL D +N
Sbjct: 71 EGEAPDADFGPGGFAGLTEIFN--LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFA 128
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
+ + D SG VL RL +++
Sbjct: 129 LPEAKLGIVPD----SGGVL--------------------------------RLPKILPP 152
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVN 225
+ +M+ GR + A EAL WG+ N++V+
Sbjct: 153 AIVNEMVMTGRRMGAEEALRWGVVNRVVS 181
>sp|Q9LCU3|CBAD2_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-2 OS=Arthrobacter sp.
GN=fcbB2 PE=1 SV=1
Length = 276
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 45/211 (21%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ I RP K NA + + L E + R E D +L G+ F +GFDL E+
Sbjct: 16 GVATIRFTRPSKHNAASAQLLLETLEALYRLESDDSVGAIVLTGEGAVFSAGFDLEEVPM 75
Query: 84 NPDTKLFDDFR-EFLQKPA--------KKPIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
P +++ FR + L A +KP +AAI G AVG GL ++L CDL +
Sbjct: 76 GPASEIQSHFRLKALYYHAVIHMLARIEKPTLAAINGPAVGGGLGMSLACDLAVCTD--- 132
Query: 135 MGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMI 194
R +L + +S G+ ++ S +P +++
Sbjct: 133 ------RATFLP-AWMSIGIA----------------NDASSSFYLP----------RIV 159
Query: 195 GTSRTMDMISLGRHITAREALDWGLCNKMVN 225
G R M+ + R + A EA +WG+ N++ +
Sbjct: 160 GYRRAMEWLLTNRTLGADEAYEWGVVNRVFS 190
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 44/236 (18%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
IT I +NRP+ NA+ + L E + + +D + + + +G FC+G DL E +
Sbjct: 45 GITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKERE 104
Query: 83 ENPDTKL---FDDFREFLQKPAKKPI--IAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
+ D ++ R + + A P+ IAA+ G+A+G GL+LAL CDLR + +MG
Sbjct: 105 QMSDVEVGTFVQRLRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGL 164
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+R L +P T +RL + +G +
Sbjct: 165 I----------------------------------ETTRGL-LPGAGGT-QRLPRCLGVA 188
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSK--LSQSMLADR 251
++I GR + +A + GL N V A RA+ +++ L Q+ +A R
Sbjct: 189 LAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQEILPQAPIAVR 244
>sp|O85078|CBAD1_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-1 OS=Arthrobacter sp.
GN=fcbB1 PE=1 SV=2
Length = 276
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 45/211 (21%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ I RP K NA + + L E + R E D +L G+ F +GFDL E+
Sbjct: 16 GVATIRFTRPSKHNAASGQLLLETLEALYRLESDDSVGAIVLTGEGAVFSAGFDLEEVPM 75
Query: 84 NPDTKLFDDFR-EFLQKPA--------KKPIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
P +++ FR + L A +KP +AAI G AVG GL ++L CDL +
Sbjct: 76 GPASEIQSHFRLKALYYHAVIHMLARIEKPTLAAINGPAVGGGLGMSLACDLAVCTD--- 132
Query: 135 MGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMI 194
R +L + +S G+ ++ S +P +++
Sbjct: 133 ------RATFLP-AWMSIGIA----------------NDASSSFYLP----------RIV 159
Query: 195 GTSRTMDMISLGRHITAREALDWGLCNKMVN 225
G R M+ + R + A EA +WG+ N++ +
Sbjct: 160 GYRRAMEWLLTNRTLGADEAYEWGVVNRVFS 190
>sp|Q86YB7|ECHD2_HUMAN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Homo sapiens GN=ECHDC2 PE=2 SV=2
Length = 292
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAIL-YGQEGNFCSGFDLHELD 82
IT I +NRP NA+ + L E + + +D + + + G +G FC+G DL E +
Sbjct: 41 GITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKERE 100
Query: 83 ENPDTK----------LFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEEN 132
+ + + L +D F PA P IAA+ G+A+G GL+LAL CDLR +
Sbjct: 101 QMSEAEVGVFVQRLRGLMNDIAAF---PA--PTIAAMDGFALGGGLELALACDLRVAASS 155
Query: 133 VLMGF 137
+MG
Sbjct: 156 AVMGL 160
>sp|P94549|FADB_BACSU Probable enoyl-CoA hydratase OS=Bacillus subtilis (strain 168)
GN=fadB PE=2 SV=1
Length = 258
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 43/203 (21%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHE---L 81
+ +++++ P NA++ + L+ L + + E D I++G+ F +G D+ E L
Sbjct: 12 VAVLTIHNPPA-NALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSL 70
Query: 82 DENPDTKLFDDFREFLQKPAK---KPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFY 138
N D+ L + + L + + KPIIAAI G A+G GL+LA+ C +R E+ +G
Sbjct: 71 KGNEDSSLLAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLG-- 128
Query: 139 NRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSR 198
+P L IP T +RL + +GT++
Sbjct: 129 ----------------------LPELNLG-----------IIPGFAGT-QRLPRYVGTAK 154
Query: 199 TMDMISLGRHITAREALDWGLCN 221
+++I G I+ +EALD GL +
Sbjct: 155 ALELIGSGEPISGKEALDLGLVS 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,073,149
Number of Sequences: 539616
Number of extensions: 4353419
Number of successful extensions: 10610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 10143
Number of HSP's gapped (non-prelim): 484
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)