RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy9494
(314 letters)
>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional.
Length = 254
Score = 162 bits (413), Expect = 1e-48
Identities = 81/260 (31%), Positives = 120/260 (46%), Gaps = 65/260 (25%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDL------ 78
+T + LNRP+ NA++ T AL + + F+ D + +A+L+G G FC+G DL
Sbjct: 13 VTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTG 72
Query: 79 --HELDENPD-----TKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEE 131
+ L + D +++ KP+IAA++GYAV GL+LALWCDLR EE
Sbjct: 73 RGNRLHPSGDGPMGPSRMR----------LSKPVIAAVSGYAVAGGLELALWCDLRVAEE 122
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLG 191
+ + G + RR+ GV P D RL
Sbjct: 123 DAVFGVFCRRW----------GV--------------------------PLIDGGTVRLP 146
Query: 192 QMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQS-MLAD 250
++IG SR MD+I GR + A EAL GL N++V G A A A +++ Q+ + AD
Sbjct: 147 RLIGHSRAMDLILTGRPVDADEALAIGLANRVVPKGQARAAAEELAAELAAFPQTCLRAD 206
Query: 251 RATV-----LSECETCREEW 265
R + L E E+
Sbjct: 207 RLSALEQWGLPEEAALANEF 226
>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate
synthase, methylmalonyl-CoA decarboxylase,
3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA
isomerase. Many of these play important roles in fatty
acid metabolism. In addition to a conserved structural
core and the formation of trimers (or dimers of
trimers), a common feature in this superfamily is the
stabilization of an enolate anion intermediate derived
from an acyl-CoA substrate. This is accomplished by two
conserved backbone NH groups in active sites that form
an oxyanion hole.
Length = 195
Score = 136 bits (344), Expect = 4e-39
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 43/221 (19%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ I+LNRP+K NA++L+ LD L + E D + + +L G FC+G DL EL
Sbjct: 8 GVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAA 67
Query: 84 NPD-----TKLFDDFREFLQKPA--KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
D + +E L+ KP+IAA+ G A+G GL+LAL CD+R E+ G
Sbjct: 68 LSDAGEEARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFG 127
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
V L + +RL +++G
Sbjct: 128 L---PEV---------------------------------KLGLVPGGGGTQRLPRLVGP 151
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRA 237
+R +++ GR I+A EAL+ GL +++V + A+ A
Sbjct: 152 ARARELLLTGRRISAEEALELGLVDEVVPDEELLAAALELA 192
>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid
metabolism].
Length = 257
Score = 131 bits (332), Expect = 1e-36
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 46/237 (19%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
I +I+LNRP+K+NA+NL+ LD L E + E D + + +L G F +G DL EL
Sbjct: 14 GIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS 73
Query: 84 NPDTKLFDDFREFLQ------KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
D ++ + Q KP+IAA+ GYA+G GL+LAL CD+R E+ G
Sbjct: 74 PEDGNAAENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGL 133
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
P +L + D +RL +++G
Sbjct: 134 ------------------------PEV------------NLGLLPGDGGTQRLPRLLGRG 157
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMS-KLSQSMLADRAT 253
R +++ G I+A EAL+ GL +++V E + RA++++ +L+ LA AT
Sbjct: 158 RAKELLLTGEPISAAEALELGLVDEVV---PDAEELLERALELARRLAAPPLALAAT 211
>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family. This family
contains a diverse set of enzymes including: Enoyl-CoA
hydratase. Napthoate synthase. Carnitate racemase.
3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA
delta-isomerase.
Length = 245
Score = 108 bits (272), Expect = 5e-28
Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 45/236 (19%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ +I L+RP+ +NA++ + L L + +++ E D +L G G F +G D+ E+
Sbjct: 7 GVAVIKLDRPEAVNALSAELLTELIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAA 66
Query: 84 NPDTKLFDDFREFLQK------PAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
P + F Q KP+IAA+ GYA+G GL+LAL CD R +N G
Sbjct: 67 EPLAQQ-AQFSLEAQDLWSRLEDLPKPVIAAVNGYALGGGLELALACDYRIAADNAKFG- 124
Query: 138 YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTS 197
+P +L IP T RL ++IG S
Sbjct: 125 -----------------------LPEVKLG-----------IIPGAGGTQ-RLPRIIGVS 149
Query: 198 RTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLADRAT 253
++M+ GR I A+EAL GL +K+V V EA+ A ++ + LA A
Sbjct: 150 AALEMLLTGRRIRAQEALKMGLVDKVVPEEQLVEEAIELAQRL--ADKPPLALAAL 203
>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.
Length = 259
Score = 103 bits (260), Expect = 4e-26
Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 47/247 (19%)
Query: 9 AMLRLVSSVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ 68
M+ + +L IT+ NRPDK NA+ AL + ++ D + +L G
Sbjct: 2 TMVTDLLVELEDGVLTITI---NRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGA 58
Query: 69 EGNFCSGFDLHELDENPDTK--LFDDFREFLQK--PAKKPIIAAITGYAVGQGLDLALWC 124
F +G D+ + + P FL+ KP++AA+ G AVG G+ LAL C
Sbjct: 59 GRAFSAGGDIKDFPKAPPKPPDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALAC 118
Query: 125 DLRFVEEN--VLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPT 182
DL + E+ + F +L L D
Sbjct: 119 DLVYASESAKFSLPF--------------------------AKL------GLCPDAGGSA 146
Query: 183 CDVTIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSK 242
L ++IG +R +M+ LG ++A EAL GL N++V EA +A +++
Sbjct: 147 ------LLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVVPAAELDAEADAQAAKLAA 200
Query: 243 LSQSMLA 249
S L
Sbjct: 201 GPASALR 207
>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional.
Length = 259
Score = 95.9 bits (239), Expect = 3e-23
Identities = 74/254 (29%), Positives = 106/254 (41%), Gaps = 44/254 (17%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHEL-- 81
+T+++LNRP+ +NA++L L+E F D E +AI+ G + F +G DL E
Sbjct: 14 VTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAA 73
Query: 82 --DENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYN 139
F + KPIIAA+ G A+G G +LAL CDL EN
Sbjct: 74 GGKRGWPESGFGGLTS--RFDLDKPIIAAVNGVAMGGGFELALACDLIVAAEN------- 124
Query: 140 RRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRT 199
+AL PR L + RL + IG R
Sbjct: 125 ---------------ATFALPEPRVGL-------------AALAG-GLHRLPRQIGLKRA 155
Query: 200 MDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQ-SMLADRATVLSEC 258
M MI GR +TARE L+ G N++V G + A A + S S+ A + V
Sbjct: 156 MGMILTGRRVTAREGLELGFVNEVVPAGELLAAAERWADDILACSPLSIRASKQAVYRGL 215
Query: 259 ETCREEWMSERKHY 272
E EE ++ ++ Y
Sbjct: 216 EVSLEEAITAQRDY 229
>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional.
Length = 254
Score = 92.0 bits (229), Expect = 8e-22
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 41/217 (18%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHEL-- 81
+ +I++NRP+ NA+N L + + D + + IL G G FC+G DL
Sbjct: 12 RVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFAR 71
Query: 82 DENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
E P F ++P +KP+IAA+ GYA+ G +LAL CDL + G
Sbjct: 72 GERPSIP-GRGFGGLTERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPE-- 128
Query: 142 FVYLKDSLLS-SGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTM 200
+K L++ G +L RL + I M
Sbjct: 129 ---VKRGLVAAGGGLL--------------------------------RLPRRIPYHIAM 153
Query: 201 DMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRA 237
++ G +TA A + GL N++ G A+ A+ A
Sbjct: 154 ELALTGDMLTAERAHELGLVNRLTEPGQALDAALELA 190
>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional.
Length = 258
Score = 88.9 bits (221), Expect = 1e-20
Identities = 61/235 (25%), Positives = 96/235 (40%), Gaps = 49/235 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ ++LNRP+ NA++ AL + + D + + +L G + FC+G DL EL +
Sbjct: 14 VRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGD 73
Query: 85 PDTKLFDDFRE---FLQKPA-KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNR 140
+ PA +KP+I AI G AV GL+LAL CD +L+
Sbjct: 74 G-SAYGAQDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACD-------ILIASERA 125
Query: 141 RFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTM 200
RF D +R +P +++ RL Q +G R
Sbjct: 126 RFA----------------------------DTHARVGILPGWGLSV-RLPQKVGIGRAR 156
Query: 201 DMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA-DRATV 254
M G + A +AL GL ++V E + RA + L+ S+ + A V
Sbjct: 157 RMSLTGDFLDAADALRAGLVTEVV----PHDELLPRARR---LAASIAGNNPAAV 204
>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional.
Length = 261
Score = 88.6 bits (220), Expect = 2e-20
Identities = 68/236 (28%), Positives = 97/236 (41%), Gaps = 67/236 (28%)
Query: 22 ILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHE 80
IL ITL +RP K NAI+ KT A+ E F DD E +AI+ G E F +G+DL
Sbjct: 13 ILEITL---DRP-KANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKA 68
Query: 81 LDEN--PD-----------TKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLR 127
E PD T++FD KP+IAA+ GYA G G +LAL D
Sbjct: 69 AAEGEAPDADFGPGGFAGLTEIFD---------LDKPVIAAVNGYAFGGGFELALAADFI 119
Query: 128 FVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTI 187
+N + G+V D +
Sbjct: 120 VCADNASFALPEAK----------LGIV--------------------PDSG------GV 143
Query: 188 RRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKL 243
RL + + + +M+ GR + A EAL WG+ N++V E M RA ++++
Sbjct: 144 LRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVV----PQAELMDRARELAQQ 195
>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 85.6 bits (212), Expect = 2e-19
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 50/240 (20%)
Query: 10 MLRLVS-SVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ 68
ML+ +S T ++ I+LNRP NA++L L+ LQ + + ++ + IL G
Sbjct: 1 MLQNISVDYVTP---HVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGA 57
Query: 69 -EGNFCSGFDLHE---LDENPDTKLFDDFREFLQKPAK--KPIIAAITGYAVGQGLDLAL 122
E FC+G DL E ++E R ++ + +P+IAAI G A+G GL+LAL
Sbjct: 58 GEKAFCAGADLKERAGMNEEQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELAL 117
Query: 123 WCDLRFVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPT 182
CD R E+ +G + T L IP
Sbjct: 118 ACDFRIAAESASLG------------------------LTETTLA-----------IIPG 142
Query: 183 CDVTIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSK 242
T +RL ++IG R ++I GR I+A+EA + GL +V +AI++++
Sbjct: 143 AGGT-QRLPRLIGVGRAKELIYTGRRISAQEAKEIGLVEFVV----PAHLLEEKAIEIAE 197
>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase.
Length = 251
Score = 81.8 bits (202), Expect = 4e-18
Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 57/285 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHE--- 80
I + L+RP+ NAI + L L+ ++ + D + + +L G FC+G DL E
Sbjct: 5 IVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRK 64
Query: 81 LDENPDTKLFDDFRE-FLQKPAKK-PIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFY 138
+ + K + R F A P IA + G A+G GL+LAL CDLR E + G
Sbjct: 65 MSPSEVQKFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFG-- 122
Query: 139 NRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSR 198
+P T L IP T +RL +++G SR
Sbjct: 123 ----------------------LPETGLA-----------IIPGAGGT-QRLPRLVGRSR 148
Query: 199 TMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRA----------IQMSK--LSQS 246
++I GR I AREA GL N V G A +A+ A I+M+K +++
Sbjct: 149 AKELIFTGRRIGAREAASMGLVNYCVPAGEAYEKALELAQEINQKGPLAIKMAKKAINEG 208
Query: 247 MLADRATVLSECETCREEWMSERKHYIGISFELKFLQKKKKAKNG 291
D A+ L E C E+ + + G++ F +K+K G
Sbjct: 209 SEVDMASGLEIEEECYEQVLKTKDRLEGLA---AFAEKRKPVYTG 250
>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional.
Length = 257
Score = 81.2 bits (201), Expect = 6e-18
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCS-GFDLHELDE 83
+ +I+LN P NA++ + L L E + + E D + +++G EG F S G D+ E
Sbjct: 12 VAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHG-EGRFFSAGADIKEFTS 69
Query: 84 NPDTK-----------LFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEEN 132
+ + F+ +F KP+IAAI G A+G GL+LA+ C +RF E+
Sbjct: 70 VTEAEQATELAQLGQVTFERVEKF-----SKPVIAAIHGAALGGGLELAMSCHIRFATES 124
Query: 133 VLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQ 192
+G +P L IP T +RL +
Sbjct: 125 AKLG------------------------LPELNLG-----------LIPGFAGT-QRLPR 148
Query: 193 MIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLS-QSMLADR 251
+G ++ ++M+ IT EAL WGL N + T + +A A +++ S + A
Sbjct: 149 YVGKAKALEMMLTSEPITGAEALKWGLVNGVFPEETLLDDAKKLAKKIAGKSPATTRAVL 208
Query: 252 ATVLSECETCREEWMSERKHYIGISFELK--------FLQKKK 286
+ + + E + G F + FL+K+K
Sbjct: 209 ELLQTTKSSSYYEGVKREAKIFGEVFTSEDAKEGVQAFLEKRK 251
>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional.
Length = 255
Score = 80.4 bits (199), Expect = 1e-17
Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 60/236 (25%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ I LNRP K NA+N + AL+ R + + +L+G+ +FC+G DL EL E
Sbjct: 11 GVATIGLNRPAKRNALNDGLIAALRAAFARLPEGVRA--VVLHGEGDHFCAGLDLSELRE 68
Query: 84 NPDTKLFDDFREFLQ------------KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEE 131
D E + + + P+IAA+ G VG GL+LA +R +E
Sbjct: 69 R-------DAGEGMHHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADE 121
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLG 191
+ +AL P Q R I R+
Sbjct: 122 S----------------------TYFAL--PEGQ-----R-------GIFVGGGGSVRVP 145
Query: 192 QMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAM---TRAIQMSKLS 244
++IG +R DM+ GR A+E GL +V G A+ +AM R Q + L+
Sbjct: 146 RLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEALDKAMELARRIAQNAPLT 201
>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional.
Length = 263
Score = 79.0 bits (195), Expect = 5e-17
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 53/225 (23%)
Query: 26 TLI-SLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
TLI ++NRP+ NA++ + L + + R ++D + IL G G FC+G DL +
Sbjct: 15 TLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKK 74
Query: 85 PDTKLFDDFREFLQKPAK-----------KPIIAAITGYAVGQGLDLALWCDLRFVEENV 133
P D F++ P++ KP+IAA+ G A+ G ++ D+R E+
Sbjct: 75 PPG---DSFKDGSYDPSRIDALLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESA 131
Query: 134 LMG-FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQ 192
G + ++ + S V RL +
Sbjct: 132 KFGISEAKWSLF---PMGGSAV----------------------------------RLVR 154
Query: 193 MIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRA 237
I + D++ GRHITA EA + GL +V G A+ +A+ A
Sbjct: 155 QIPYTVACDLLLTGRHITAAEAKEIGLIGHVVPDGQALDKALELA 199
>gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional.
Length = 243
Score = 75.8 bits (187), Expect = 4e-16
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 45/210 (21%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAI-LYGQEGNFCSGFDLHE-- 80
+ I L RP++ NA+N + + L+E +++ D ES AI L GQ FC+G DL
Sbjct: 9 QVLTIELQRPERRNALNAELCEELREAVRKAVD--ESARAIVLTGQGTVFCAGADLSGDV 66
Query: 81 -LDENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYN 139
D+ PD L + P P+IAAI G A+G GL LA+ CDLR V
Sbjct: 67 YADDFPD-ALIEMLHAIDAAPV--PVIAAINGPAIGAGLQLAMACDLRVVAPEA------ 117
Query: 140 RRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRT 199
F P + +L DN TIRRL ++G R
Sbjct: 118 -YF-----------------QFPVAKYGIAL-DNW-----------TIRRLSSLVGGGRA 147
Query: 200 MDMISLGRHITAREALDWGLCNKMVNCGTA 229
M+ +TA +AL G+ N++ A
Sbjct: 148 RAMLLGAEKLTAEQALATGMANRIGTLADA 177
>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional.
Length = 255
Score = 76.0 bits (187), Expect = 5e-16
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ L++LNRP+ NA+N L L ++ DT + ++ G F +G DL+E+ E
Sbjct: 12 VLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK 71
Query: 85 PDTKLFDDFREFL-QKPAK--KPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRR 141
+D R L Q+ KP+IAA+ GYA+G G +LAL CD+ EN G
Sbjct: 72 DLAATLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFG----- 126
Query: 142 FVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
+P L +P T +RL + +G S
Sbjct: 127 -------------------LPEITLG-----------IMPGAGGT-QRLIRSVGKSLASQ 155
Query: 202 MISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKL--SQSMLADRA 252
M+ G ITA++A GL +++ + + RA+Q++ S LA RA
Sbjct: 156 MVLTGESITAQQAQQAGLVSEV--FPPEL--TLERALQLASKIARHSPLALRA 204
>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated.
Length = 260
Score = 75.9 bits (187), Expect = 5e-16
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHEL- 81
+I ++++NRP +NA+N +TL L + E+D IL G E F +G D+ E+
Sbjct: 13 HIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMK 72
Query: 82 DENP-DTKLFDD-----FREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLM 135
D N + + F FR+ + KP+IAAI G+A+G G +L++ CD+R E
Sbjct: 73 DLNEEEGRKFGLLGNKVFRKL--ENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKF 130
Query: 136 GFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIG 195
G P L P T +RL +++G
Sbjct: 131 G------------------------QPEVGLG-----------ITPGFGGT-QRLARIVG 154
Query: 196 TSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMS 241
+ ++I G I A EAL GL NK+V + EA A +++
Sbjct: 155 PGKAKELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAKALANKIA 200
>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional.
Length = 257
Score = 75.1 bits (185), Expect = 1e-15
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 49/243 (20%)
Query: 27 LISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDENPD 86
LI+LNRP +NA+N +D L + F+ D ++ G E F +G D+ E+ +
Sbjct: 16 LITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSF 75
Query: 87 TKLFD-DFREFLQKPAK--KPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRRFV 143
++ D+ +K A+ KP+IAA+ GYA+G G +LA+ CD+ + G
Sbjct: 76 MDVYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFG------- 128
Query: 144 YLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMDMI 203
P +L +P + +RL + +G ++ MD+
Sbjct: 129 -----------------QPEIKLG-----------VLPGMGGS-QRLTRAVGKAKAMDLC 159
Query: 204 SLGRHITAREALDWGLCNKMVNCGTAVGEAM---TRAIQMSKLSQSMLA----DRA--TV 254
GR + A EA GL +++V + EA+ T S L M+A +RA T
Sbjct: 160 LTGRMMDAAEAERAGLVSRVVPADKLLDEALAAATTIASFS-LPAVMMAKEAVNRAYETT 218
Query: 255 LSE 257
L+E
Sbjct: 219 LAE 221
>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional.
Length = 248
Score = 73.7 bits (181), Expect = 3e-15
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+++++RPDK+NA+NL+ + +K+ D + + I+ G+ FC G DL E +
Sbjct: 10 YAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD 69
Query: 85 PDTKLFDDFREFLQ--KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENV--LMGFYN 139
L + F ++ + + K I+AI G G + +AL D +F +V + F
Sbjct: 70 FAIDLRETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQR 128
>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 73.4 bits (181), Expect = 4e-15
Identities = 66/259 (25%), Positives = 98/259 (37%), Gaps = 61/259 (23%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDENP-- 85
+ LNRPDK+NA++ + L IKR + D IL G+ G FC+G D+ + +P
Sbjct: 16 VRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPGN 75
Query: 86 DTKLFDDFREFLQKPAKK----------PIIAAITGYAVGQGLDLALWCDLRFVEENVLM 135
KL A++ P+IAA+ G G GL +AL D+R
Sbjct: 76 AVKLLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAP---- 131
Query: 136 GFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIG 195
D+ LS + L VP SLR + +D+A
Sbjct: 132 -----------DTKLSIMEAKWGL-VPDMAGTVSLRGLVRKDVA---------------- 163
Query: 196 TSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTR--------AIQMSKLSQSM 247
++ R +A EAL+ GL + + A A+ R AI +K
Sbjct: 164 ----RELTYTARVFSAEEALELGLVTHVSDDPLAAALALAREIAQRSPDAIAAAK----R 215
Query: 248 LADRATVLSECET-CREEW 265
L +R+ S RE
Sbjct: 216 LINRSWTASVRALLARESV 234
>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA
hydratase paaB. This family of proteins are found
within apparent operons for the degradation of
phenylacetic acid. These proteins contain the enoyl-CoA
hydratase domain as detected by pfam00378. This activity
is consistent with current hypotheses for the
degradation pathway which involve the ligation of
phenylacetate with coenzyme A (paaF), hydroxylation
(paaGHIJK), ring-opening (paaN) and degradation of the
resulting fatty acid-like compound to a Krebs cycle
intermediate (paaABCDE).
Length = 256
Score = 73.0 bits (179), Expect = 6e-15
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 45/223 (20%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDENPD- 86
++LNRPDK+N+ + L+E ++R E D L +L G FC+G DL E + P
Sbjct: 12 LTLNRPDKLNSFTAEMHLELREALERVERDDARAL-MLTGAGRGFCAGQDLSERNPTPGG 70
Query: 87 -----TKLFDDFREFLQKPAK--KPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYN 139
+ + +++ P++ A+ G A G G +LAL CD+ E+
Sbjct: 71 APDLGRTIETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESA------ 124
Query: 140 RRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRT 199
RF+ ++ IP T L +++G +R
Sbjct: 125 -RFI----------------------------QAFAKIGLIPDSGGTW-SLPRLVGRARA 154
Query: 200 MDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSK 242
M + LG + AR A WGL ++V+ + EA A+ ++
Sbjct: 155 MGLAMLGEKLDARTAASWGLIWQVVDDAALMDEAQALAVHLAA 197
>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional.
Length = 277
Score = 72.3 bits (178), Expect = 1e-14
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 62/234 (26%)
Query: 25 ITLISLNRPDKINAINLKTLDALQE-----NIKRFEDDTESPLAILYGQEGNFCSGFDLH 79
+ I+LNRP++ N + T ++ E + DD ++ +L G GNFCSG D+H
Sbjct: 27 VATITLNRPERKNPL---TFESYAELRDLFRELVYADDVKA--VVLTGAGGNFCSGGDVH 81
Query: 80 ELDENPDTKLFDDFREFLQ------------KPAKKPIIAAITGYAVGQGLDLALWCDLR 127
E+ P TK+ D E L + +PIIAA+ G G G LA+ DLR
Sbjct: 82 EIIG-PLTKM--DMPELLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLR 138
Query: 128 FVEENVLMGF-YNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVT 186
+ F + R V L + + + +L PR
Sbjct: 139 LGTPSAKTAFLFTR--VGLAGADMGACALL-----PR----------------------- 168
Query: 187 IRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQM 240
+IG R +++ GR ++A E WG N++V + EA A ++
Sbjct: 169 ------IIGQGRASELLYTGRSMSAEEGERWGFFNRLVEPEELLAEAQALARRL 216
>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional.
Length = 266
Score = 71.9 bits (177), Expect = 1e-14
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 55/229 (24%)
Query: 25 ITLISLNRPDKINAINLKT-LDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHEL-- 81
I +++NRP+ NA++ +DAL D IL G F SG ++ ++
Sbjct: 13 IVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRA 72
Query: 82 ----DENPDTKLFDDFREFLQKPAKK------PIIAAITGYAVGQGLDLALWCDLRFVEE 131
+ +R +Q+ P+IAA+ G A+G G DLA CD+R E
Sbjct: 73 RVGAFGGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASE 132
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVL---YALHVPRTQLKHSLRDNLSRDLAIPTCDVTIR 188
+S + G++ A +PR
Sbjct: 133 TARFA----------ESFVKLGLIPGDGGAWLLPRI------------------------ 158
Query: 189 RLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRA 237
IG +R +M G I A AL+WGL +++V + A A
Sbjct: 159 -----IGMARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAARALA 202
>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase.
Length = 265
Score = 71.3 bits (175), Expect = 3e-14
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 48/240 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
I I++NRP +NA+ + L KR ++D + IL G FCSG DL
Sbjct: 20 IATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDL----TA 75
Query: 85 PDTKLFDDFREFLQKPA------KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFY 138
+ D ++ P +KPII AI G+A+ G ++AL CD +L+
Sbjct: 76 AEEVFKGDVKDVETDPVAQMERCRKPIIGAINGFAITAGFEIALACD-------ILVASR 128
Query: 139 NRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSR 198
+F D ++ P+ ++ ++L ++IG +R
Sbjct: 129 GAKF----------------------------IDTHAKFGIFPSWGLS-QKLSRIIGANR 159
Query: 199 TMDMISL-GRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLADRATVLSE 257
+SL +TA A WGL N +V + +A A + K +Q M+ +V+++
Sbjct: 160 AR-EVSLTAMPLTAETAERWGLVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVIND 218
>gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional.
Length = 255
Score = 71.1 bits (175), Expect = 3e-14
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 50/242 (20%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
++ LI L+RP K NA + LD L + +E D E +A+L+ +F +G DL ++
Sbjct: 8 HVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAP 67
Query: 84 NPDTKLF-------DDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
F D + + + KP++ A+ GY + G++L L D+ +N
Sbjct: 68 KLAAGGFPFPEGGIDPWG-TVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNT--- 123
Query: 137 FYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGT 196
RF L+ V R L P T+ R Q G
Sbjct: 124 ----RFAQLE--------------VQRGIL--------------PFGGATL-RFPQAAGW 150
Query: 197 SRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSK--LSQSMLADRATV 254
M + G A+EAL GL ++V GE + RAI++++ + L +AT+
Sbjct: 151 GNAMRYLLTGDEFDAQEALRLGLVQEVV----PPGEQLERAIELAERIARAAPLGVQATL 206
Query: 255 LS 256
S
Sbjct: 207 AS 208
>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional.
Length = 249
Score = 70.9 bits (174), Expect = 3e-14
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ LI++N PD+ NA+ + L+ + E D + ++ G FC+G DL L
Sbjct: 13 VALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAA 72
Query: 85 PDT-------KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLR 127
P +++D F P P IAA+ G AVG GL+LAL D+R
Sbjct: 73 PGRPAEDGLRRIYDGFLAVASCPL--PTIAAVNGAAVGAGLNLALAADVR 120
>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional.
Length = 269
Score = 70.5 bits (173), Expect = 5e-14
Identities = 50/226 (22%), Positives = 85/226 (37%), Gaps = 44/226 (19%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELD 82
+ I+ N P + NA++L +AL + + EDD + +L G E F SG D+ + +
Sbjct: 20 GLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFE 79
Query: 83 E---NPDTKLFDDFREFLQKPA----KKPIIAAITGYAVGQGLDLALWCDLRFVEENVLM 135
E + + + + A KP IA I GY +G G+ +AL CD+R E+
Sbjct: 80 ESRSDAEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRF 139
Query: 136 GFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIG 195
G +P +L + ++ L ++G
Sbjct: 140 G------------------------IPAARLGLGYGYD------------GVKNLVDLVG 163
Query: 196 TSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMS 241
S D+ R A EAL GL +++ A ++
Sbjct: 164 PSAAKDLFYTARRFDAAEALRIGLVHRVTAADDLETALADYAATIA 209
>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 70.2 bits (172), Expect = 6e-14
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 46/210 (21%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I L++LNRP+K+NA+N +D L + E D IL G + F +G D+HE
Sbjct: 13 IALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSA 72
Query: 84 N----PDTKLFDDFREFLQKPAK-----KPIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
+ D L D R A+ KP+IAA+ G A G G C+ + E V
Sbjct: 73 SVAAGADVALRDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGG------CE---ITEAVH 123
Query: 135 MGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMI 194
+ + R ++ K + L +P PT T +RL ++
Sbjct: 124 LAIASERALFAKPEI--------RLGMP------------------PTFGGT-QRLPRLA 156
Query: 195 GTSRTMDMISLGRHITAREALDWGLCNKMV 224
G R ++++ G +A AL+ GL N +V
Sbjct: 157 GRKRALELLLTGDAFSAERALEIGLVNAVV 186
>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional.
Length = 272
Score = 70.0 bits (172), Expect = 6e-14
Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 56/216 (25%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDL----- 78
++ ++LNRP K NA+N L E + + D E +L G +F G DL
Sbjct: 15 HVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAG 74
Query: 79 ------HELDENPDTKLFDDFREFLQKP------AKKPIIAAITGYAVGQGLDLALWCDL 126
+ P T L + LQ +KP+IAA+ G+ +G G+DL CD+
Sbjct: 75 VFGQLGKDGLARPRTDLRREILR-LQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDM 133
Query: 127 RFVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDV- 185
R+ + K S+R+ DL + DV
Sbjct: 134 RYASADA---------------------------------KFSVRE---VDLGM-VADVG 156
Query: 186 TIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCN 221
+++RL ++IG ++ GR I A EA GL N
Sbjct: 157 SLQRLPRIIGDGHLRELALTGRDIDAAEAEKIGLVN 192
>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional.
Length = 261
Score = 69.3 bits (170), Expect = 1e-13
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ L+ LNRP+ NA+N++ L E+ +D + +L G E F +G D+ E
Sbjct: 18 VALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA 77
Query: 85 PDTKLFDDFREFLQKP---AKKPIIAAITGYAVGQGLDLALWCDL 126
+++ E + KP+IAA+ GYA+G G +LA+ D+
Sbjct: 78 GAIEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADI 122
Score = 35.8 bits (83), Expect = 0.019
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 189 RLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLS 244
RL + +G + M M G + A EAL GL +++V + A+ A +++++
Sbjct: 149 RLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVEDEQTLPRALELAREIARMP 204
>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA
hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase.
Length = 275
Score = 68.8 bits (168), Expect = 2e-13
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE-NPD 86
++LNRP + NA++L + + + + + IL G +FCSG DL L+ +
Sbjct: 21 LNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQ 80
Query: 87 TKLFDDFR---------EFLQ------KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEE 131
+ D R +FLQ + +KP+IAAI G +G G+D+ CD+R+ E
Sbjct: 81 SSSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSE 140
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDV-TIRRL 190
D+ S V DLAI T D+ T++RL
Sbjct: 141 ---------------DAFFSVKEV---------------------DLAI-TADLGTLQRL 163
Query: 191 GQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMT 235
++G M++ GR + EA + GL +++ + E +
Sbjct: 164 PSIVGYGNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVR 208
>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional.
Length = 272
Score = 68.6 bits (168), Expect = 3e-13
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ +I+LNRPD++NA + + R E D + +L G FC+G D+ EL
Sbjct: 16 VAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTI 75
Query: 85 P--DTKLFDDFREFL--QKPA-----------KKPIIAAITGYAVGQGLDLALWCDLRF 128
D + D R F+ ++P +KP+IAAI G G GL AL CD+RF
Sbjct: 76 DPSDGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRF 134
>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional.
Length = 266
Score = 66.3 bits (162), Expect = 2e-12
Identities = 56/229 (24%), Positives = 89/229 (38%), Gaps = 54/229 (23%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGN-FCSGFDLH--- 79
+ +++L+ P+ +NA+++ L L E + ED ++ G FC+G +L
Sbjct: 13 GVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRG 72
Query: 80 ----ELDENPDT-----KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVE 130
E D D + F L+ PI+ A+ G A G G+ AL DL
Sbjct: 73 SGGRESDSGGDAGAALETAYHPFLRRLRN-LPCPIVTAVNGPAAGVGMSFALMGDLILCA 131
Query: 131 ENV--LMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIR 188
+ L F RR G+V P T
Sbjct: 132 RSAYFLQAF--RRI----------GLV-------------------------PDGGSTW- 153
Query: 189 RLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRA 237
L +++G +R M++ LG + A AL WGL N++V+ + EAM A
Sbjct: 154 LLPRLVGKARAMELSLLGEKLPAETALQWGLVNRVVDDAELMAEAMKLA 202
>gnl|CDD|235632 PRK05869, PRK05869, enoyl-CoA hydratase; Validated.
Length = 222
Score = 64.9 bits (158), Expect = 3e-12
Identities = 50/166 (30%), Positives = 67/166 (40%), Gaps = 41/166 (24%)
Query: 64 ILYGQEGNFCSGFDLHELD--ENPDTKLFDDFR-EFLQKPAK--KPIIAAITGYAVGQGL 118
ILYG F +G D+ EL + R + + A KP +AAITGYA+G GL
Sbjct: 56 ILYGGHEIFSAGDDMPELRTLSAQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGL 115
Query: 119 DLALWCDLRFVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDL 178
LAL D R +NV G + +L L
Sbjct: 116 TLALAADWRVSGDNVKFG---------------ATEILAGL------------------- 141
Query: 179 AIPTCDVTIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
P+ D RL + G SR +++ GR A EAL GL ++MV
Sbjct: 142 -APSGDGMA-RLTRAAGPSRAKELVFSGRFFDAEEALALGLIDEMV 185
>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 64.2 bits (157), Expect = 7e-12
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ ++LNRPDK+N+ + L+E + + EDD L +L G FC+G DL + D
Sbjct: 13 GVATLTLNRPDKLNSFTREMHRELREALDQVEDDGARAL-LLTGAGRGFCAGQDLADRDV 71
Query: 84 NPD---TKLFDDFREF-------LQKPAKKPIIAAITGYAVGQGLDLALWCDL 126
P L + F L+ P+IAA+ G A G G +LAL CD+
Sbjct: 72 TPGGAMPDLGESIETFYNPLVRRLRA-LPLPVIAAVNGVAAGAGANLALACDI 123
Score = 31.8 bits (73), Expect = 0.41
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 190 LGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSK 242
L +++G +R + + LG ++A +A WGL ++V+ EA A ++
Sbjct: 151 LPRLVGMARALGLALLGEKLSAEQAEQWGLIWRVVDDAALADEAQQLAAHLAT 203
>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated.
Length = 266
Score = 62.7 bits (153), Expect = 2e-11
Identities = 51/212 (24%), Positives = 74/212 (34%), Gaps = 55/212 (25%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ ++LNRP NA++ L ALQ + D + +L FC+G DL E+
Sbjct: 21 VATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA 80
Query: 85 PD----TKLFDDFREFLQKPAK--KPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFY 138
LF +Q +P+IA + G A G L CDL +
Sbjct: 81 RGLAYFRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTA----- 135
Query: 139 NRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSR 198
RF GV N+ + P M+ SR
Sbjct: 136 --RFA-------VPGV------------------NIGLFCSTP-----------MVALSR 157
Query: 199 ------TMDMISLGRHITAREALDWGLCNKMV 224
M+M+ G I A A +WGL N++V
Sbjct: 158 NVPRKQAMEMLLTGEFIDAATAREWGLVNRVV 189
>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional.
Length = 302
Score = 62.4 bits (152), Expect = 5e-11
Identities = 54/233 (23%), Positives = 81/233 (34%), Gaps = 73/233 (31%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDL----- 78
I I+LNRP+K NAI T L+ ++R + D + ++ G FC+G+DL
Sbjct: 19 RIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAE 78
Query: 79 -------------------HELDENPDTKLF--------DDFREFLQKPAKKPIIAAITG 111
H D+ D + F A KP +A + G
Sbjct: 79 GSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWH--AHKPTVAKVHG 136
Query: 112 YAVGQGLDLALWCDLRFVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLR 171
Y V G D+AL CD ++ +G+ P T
Sbjct: 137 YCVAGGTDIALHCDQVIAADDAKIGY------------------------PPT------- 165
Query: 172 DNLSRDLAIPTCDVTIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
R +P + RLG R ++ G IT +A +WGL + V
Sbjct: 166 ----RVWGVPATGMWAYRLGP----QRAKRLLFTGDCITGAQAAEWGLAVEAV 210
>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional.
Length = 276
Score = 61.4 bits (149), Expect = 6e-11
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 49/235 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
I LI+LNRP+++N++ + L+E + D + +L G F SG D
Sbjct: 20 IALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVV 79
Query: 85 PDT-------------KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEE 131
P +L DD L++ +P+IAA+ G A+G GL LAL D+R
Sbjct: 80 PHVEGLTRPTYALRSMELLDDVILALRR-LHQPVIAAVNGPAIGGGLCLALAADIRVASS 138
Query: 132 NVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLG 191
+ R + + L +S + L L +PR
Sbjct: 139 SAYF-----RAAGINNGLTASELGLSYL-LPRA--------------------------- 165
Query: 192 QMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQS 246
IG+SR +++ GR + A EA GL ++ V + A +M+ S+
Sbjct: 166 --IGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTCYAIAARMAGFSRP 218
>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 60.8 bits (148), Expect = 1e-10
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 64/284 (22%)
Query: 26 TLI-SLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
TL+ +L+ P NA++ A E + E D +L G G FC+G +L+ L EN
Sbjct: 13 TLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLEN 72
Query: 85 PD------TKLFDDFREFLQ--KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
D ++++ + KP+IAA+ G A G G LAL CDL L+
Sbjct: 73 RAKPPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDL-------LVA 125
Query: 137 FYNRRFV--YLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMI 194
+ +FV Y+K L P L L R LA
Sbjct: 126 ARDAKFVMAYVKVGL-----------TPDGGGSWFLARALPRQLA--------------- 159
Query: 195 GTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLADRATV 254
+++ G+ I+A G+ N++ G A+ EA+ A Q++ S + LA ++
Sbjct: 160 -----TELLLEGKPISAERLHALGVVNRLAEPGQALAEALALADQLAAGSPNALARIKSL 214
Query: 255 LSECE--TCREEWMSERKHYI----------GISFELKFLQKKK 286
+++ T + +ER H++ GI+ FL+K+
Sbjct: 215 IADAPEATLAAQLEAERDHFVASLHHADALEGIA---AFLEKRA 255
>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 59.2 bits (144), Expect = 3e-10
Identities = 54/234 (23%), Positives = 80/234 (34%), Gaps = 54/234 (23%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGN-FCSGFDLHELD 82
I I+ NRP NA+ + L E + D +L G F +G D+ +
Sbjct: 17 GIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFR 76
Query: 83 ENPDTKLFDDFREFLQKPAK------------KPIIAAITGYAVGQGLDLALWCDLRFVE 130
F + + + P IAAI G VG G +A CDLR
Sbjct: 77 A------FSTAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIAT 130
Query: 131 ENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRL 190
+ GF + RT L + LS + RL
Sbjct: 131 PSARFGF----------------------PIART-----LGNCLSMS--------NLARL 155
Query: 191 GQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLS 244
++G +R DM+ R + A EAL GL N++V A A ++ +
Sbjct: 156 VALLGAARVKDMLFTARLLEAEEALAAGLVNEVVEDAALDARADALAELLAAHA 209
>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional.
Length = 296
Score = 58.1 bits (141), Expect = 1e-09
Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 29/143 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDL------ 78
I I+LNRPDK+NA + L E + D I+ G FC+G DL
Sbjct: 14 IATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNT 73
Query: 79 HELDENPDTKLFDDFREFLQKP-------------------AKKPIIAAITGYAVGQGLD 119
+LD + + E + + KP+IAA+ G AVG G
Sbjct: 74 FDLDA---PRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGAT 130
Query: 120 LALWCDLRFVEENVLMGF-YNRR 141
+ L D+R GF + RR
Sbjct: 131 MTLAMDIRLASTAARFGFVFGRR 153
>gnl|CDD|236373 PRK09076, PRK09076, enoyl-CoA hydratase; Provisional.
Length = 258
Score = 56.5 bits (137), Expect = 3e-09
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 25/127 (19%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
+ +++LN P N +L AL++ + D + ++ G E F +G DL
Sbjct: 13 VAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADL----- 66
Query: 84 NPDTKLFDD-----FREFLQK---------PAKKPIIAAITGYAVGQGLDLALWCDLRFV 129
LF D RE ++ + IAAI GYA+G GL+ AL CD+R
Sbjct: 67 ----NLFADGDKAVAREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIA 122
Query: 130 EENVLMG 136
EE M
Sbjct: 123 EEQAQMA 129
>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional.
Length = 257
Score = 55.9 bits (135), Expect = 4e-09
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLH---E 80
++ +++L+ P +NA++ + D L + + + +L G FC+G DL +
Sbjct: 13 HVAVVTLDNP-PVNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPD 71
Query: 81 LDENPDT---------KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEE 131
+ + P + F RE KP+IAA+ G A+G GL L CD+ E
Sbjct: 72 VIKGPGDLRAHNRRTRECFHAIRE-----CAKPVIAAVNGPALGAGLGLVASCDIIVASE 126
Query: 132 NVLMG 136
N + G
Sbjct: 127 NAVFG 131
>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase. Members
of this protein family are 2-ketocyclohexanecarboxyl-CoA
hydrolase, a ring-opening enzyme that acts in catabolism
of molecules such as benzoyl-CoA and cyclohexane
carboxylate. It converts -ketocyclohexanecarboxyl-CoA to
pimelyl-CoA. It is not sensitive to oxygen.
Length = 256
Score = 55.3 bits (133), Expect = 7e-09
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE 83
I I +NRP K+NA +T D L +K D + + +L G + FC+G D D
Sbjct: 12 IAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDG 71
Query: 84 N---------PDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
P +L R+ KP+IA + GYA+G G L CDL E
Sbjct: 72 GYDGRGTIGLPMEELHSAIRD-----VPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQ 126
Query: 135 MG 136
G
Sbjct: 127 FG 128
>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 54.7 bits (132), Expect = 1e-08
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
+ I LNRP+ +NA++ L L + +K + + + + +L G F +G D+ +
Sbjct: 15 RVATIMLNRPEALNALDEPMLKELLQALKEVAE-SSAHIVVLRGNGRGFSAGGDIKMMLS 73
Query: 84 NPDTKLFDDFREFLQKPA------KKPIIAAITGYAVGQGLDLALWCDLRFVEEN--VLM 135
+ D FD + + K I+AI G A G GL +AL D + + + M
Sbjct: 74 SNDESKFDGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAM 133
Query: 136 GF 137
F
Sbjct: 134 NF 135
>gnl|CDD|235744 PRK06213, PRK06213, enoyl-CoA hydratase; Provisional.
Length = 229
Score = 53.4 bits (129), Expect = 2e-08
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 10 MLRLVSSVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQE 69
M LVS + ITL K+NA++ +DAL + + EDD + ++ GQ
Sbjct: 1 MSELVSYTLEDGVATITLDD----GKVNALSPAMIDALNAALDQAEDD--RAVVVITGQP 54
Query: 70 GNFCSGFDLHELDENPDTKL------FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALW 123
G F GFDL + + R L P KP+I A TG+A+ +G L L
Sbjct: 55 GIFSGGFDLKVMTSGAQAAIALLTAGSTLARRLLSHP--KPVIVACTGHAIAKGAFLLLS 112
Query: 124 CDLR 127
D R
Sbjct: 113 ADYR 116
>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional.
Length = 298
Score = 53.8 bits (129), Expect = 2e-08
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 31/169 (18%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFD----LHE 80
+ I+LNRP+++N I D ++ I E D + + +L G F G+D
Sbjct: 15 VATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQH 74
Query: 81 LDE--NPDTKLFDDFREFLQKPAK---------------KPIIAAITGYAVGQGLDLALW 123
E D + +D ++F A+ KP+IA + G+ VG D AL
Sbjct: 75 WGEAMMTDGR-WDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALC 133
Query: 124 CDLRFVEENVLMGF-YNRRF-VYLKDSLLSSGVVLYALHVPRTQLKHSL 170
D+ ++ ++G Y+R + YL +G+ LY L + + + HSL
Sbjct: 134 ADIVIASDDAVIGTPYSRMWGAYL------TGMWLYRLSLAKVK-WHSL 175
>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional.
Length = 251
Score = 53.6 bits (129), Expect = 3e-08
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHEL--D 82
+ +I NRP+K NAI + + +K + D + G EG F +G D+ +
Sbjct: 16 VQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAA 75
Query: 83 ENPDTKLFDDFREFLQK--PAKKPIIAAITGYAVGQGLDLALWCDLRF 128
T + +FL A+KPI++ + G A+G G + L CDL F
Sbjct: 76 AMGGTSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTF 123
>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase.
Length = 327
Score = 53.6 bits (129), Expect = 4e-08
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFD--LHEL 81
I I++NRP++ NA +T+ LQ DD+ + IL G+ FCSG D +
Sbjct: 77 IAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGK 136
Query: 82 DENPDTKLFDDFREF-LQ---KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
D LQ + KP+IA + GYAVG G L + CDL +N + G
Sbjct: 137 DGYVGPDDAGRLNVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFG 195
Score = 28.2 bits (63), Expect = 5.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 190 LGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
+ +++G + +M L R TA EAL GL N +V
Sbjct: 213 MARLVGQKKAREMWFLARFYTASEALKMGLVNTVV 247
>gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.
Length = 273
Score = 52.2 bits (126), Expect = 7e-08
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 39/135 (28%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFD------ 77
I I++NRP+ NA KT+ + + DD + IL G + FCSG D
Sbjct: 23 IAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGY 82
Query: 78 -----------LHELDENPDTKLFDDFREFLQK-----PAKKPIIAAITGYAVGQGLDLA 121
L+ LD LQ+ P KP+IA + GYA+G G L
Sbjct: 83 GGYVDDDGVPRLNVLD--------------LQRLIRTCP--KPVIAMVAGYAIGGGHVLH 126
Query: 122 LWCDLRFVEENVLMG 136
L CDL +N + G
Sbjct: 127 LVCDLTIAADNAIFG 141
Score = 29.5 bits (67), Expect = 1.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 190 LGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
L +++G + ++ L R A+EALD GL N +V
Sbjct: 159 LARIVGQKKAREIWFLCRQYDAQEALDMGLVNTVV 193
>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha
subunit, mitochondrial. Members represent alpha subunit
of mitochondrial multifunctional fatty acid degradation
enzyme complex. Subunit activities include: enoyl-CoA
hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA
dehydrogenase (EC 1.1.1.35). Some characterization in
human , pig , and rat. The beta subunit has activity:
acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Length = 737
Score = 52.9 bits (127), Expect = 1e-07
Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 43/232 (18%)
Query: 17 VCTKKILNITLISLNRPD-KINAINLKTLDALQENIKRFEDDTESPLAILY-GQEGNFCS 74
+ ++ ++ ++ P+ K+N ++ + +E + + A+L G+ G+F +
Sbjct: 15 RHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVA 74
Query: 75 GFDLHELDE----NPDTKLFDDFREFLQK--PAKKPIIAAITGYAVGQGLDLALWCDLRF 128
G D+ + T+L + +E ++ ++KPI+AAI+G +G GL+LAL C R
Sbjct: 75 GADIQMIAACKTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRI 134
Query: 129 VEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIR 188
++ + +LL V+ L +P T +
Sbjct: 135 ATKD-------------RKTLLGLPEVMLGL--------------------LPGAGGT-Q 160
Query: 189 RLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVN-CGTAVGEAMTRAIQ 239
RL ++ G +DM+ G+ I A A G+ +++V+ G + A I+
Sbjct: 161 RLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIE 212
>gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ.
Members represent alpha subunit of multifunctional
enzyme complex of the fatty acid degradation cycle.
Plays a minor role in aerobic beta-oxidation of fatty
acids. FadJI complex is necessary for anaerobic growth
on short-chain acids with nitrate as an electron
acceptor. Activities include: enoyl-CoA hydratase (EC
4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35),
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A
representative is E. coli FadJ (aka YfcX). This model
excludes the FadB of TIGR02437 equivalog model [Fatty
acid and phospholipid metabolism, Degradation].
Length = 699
Score = 52.5 bits (126), Expect = 1e-07
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 48/212 (22%)
Query: 24 NITLISLNRP-DKINAINLKTLDALQENIKRFEDDTE-SPLAILYGQEGNFCSGFDLHEL 81
I +++++ P +K+N + + D + E + + + D L ++ G+ NF +G D+ L
Sbjct: 10 GIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISML 69
Query: 82 DENPDTKLFDDFREFLQKPAKK---------PIIAAITGYAVGQGLDLALWCDLRFVEEN 132
+ + + Q+ P++AAI G +G GL+LAL C
Sbjct: 70 A---ACQTAGEAKALAQQGQVLFAELEALPIPVVAAIHGACLGGGLELALAC-------- 118
Query: 133 VLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQ 192
+ R D + L +P QL +P T +RL +
Sbjct: 119 ------HSRVCSDDDKTV--------LGLPEVQLG-----------LLPGSGGT-QRLPR 152
Query: 193 MIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
+IG S +DMI G+ + A++AL GL + +V
Sbjct: 153 LIGVSTALDMILTGKQLRAKQALKLGLVDDVV 184
>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional.
Length = 288
Score = 51.5 bits (124), Expect = 2e-07
Identities = 37/129 (28%), Positives = 47/129 (36%), Gaps = 27/129 (20%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
I I+LNRP+ NA N + L L +R E D + +L G +F +G DL
Sbjct: 14 IARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPG 73
Query: 85 PDTKLFDDFREFLQ-----KPA----------------------KKPIIAAITGYAVGQG 117
D D L KP KP IA + G + G
Sbjct: 74 RDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGG 133
Query: 118 LDLALWCDL 126
L LA CDL
Sbjct: 134 LMLAWVCDL 142
>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 50.8 bits (122), Expect = 2e-07
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDENPD- 86
++LNRP+K NA++ + + L +R D + +L G +FC+G DL +
Sbjct: 18 LTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA 77
Query: 87 ---------TKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCD 125
+L + P KP+I I G A G G+ L CD
Sbjct: 78 DRATRIEEARRLAMMLKALNDLP--KPLIGRIQGQAFGGGVGLISVCD 123
>gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional.
Length = 256
Score = 50.4 bits (121), Expect = 3e-07
Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 57/203 (28%)
Query: 35 KINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGNFCSGFDLHELDE-NPDT----- 87
+N + + AL + ++ D + + +L G E F G D+ E+ + +
Sbjct: 27 SLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAEAFI 86
Query: 88 ----KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMGFYNRRFV 143
L D R F P P+IA I G+ +G GL+LA CDLR + G R
Sbjct: 87 SRLRDLCDAVRHF---PV--PVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRV- 140
Query: 144 YLKDSLLSSGV--VLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMIGTSRTMD 201
G+ V++A +PR +IG +RT
Sbjct: 141 ---------GIPSVIHAALLPR-----------------------------LIGWARTRW 162
Query: 202 MISLGRHITAREALDWGLCNKMV 224
++ G I A +AL WGL +++V
Sbjct: 163 LLLTGETIDAAQALAWGLVDRVV 185
>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid
synthetase). This model represents an enzyme,
naphthoate synthase (dihydroxynaphthoic acid
synthetase), which is involved in the fifth step of the
menaquinone biosynthesis pathway. Together with
o-succinylbenzoate-CoA ligase (menE: TIGR01923), this
enzyme takes 2-succinylbenzoate and converts it into
1,4-di-hydroxy-2-naphthoate. Included above the trusted
cutoff are two enzymes from Arabadopsis thaliana and one
from Staphylococcus aureus which are identified as
putative enoyl-CoA hydratase/isomerases. These enzymes
group with the naphthoate synthases when building a tree
and when doing BLAST searches [Biosynthesis of
cofactors, prosthetic groups, and carriers, Menaquinone
and ubiquinone].
Length = 259
Score = 49.5 bits (118), Expect = 6e-07
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESP---LAILYGQEGN-FCSGFDLH- 79
I I++NRP NA T+ E I+ +D E P + IL G FCSG D
Sbjct: 13 IAKITINRPQVRNAFRPLTVK---EIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKV 69
Query: 80 -----ELDENPDTKL--FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEEN 132
+D++ +L D R+ P KP+IA + GYA+G G L + CDL EN
Sbjct: 70 RGDYGYIDDSGVHRLNVLDVQRQIRTCP--KPVIAMVNGYAIGGGHVLHMMCDLTIAAEN 127
Query: 133 VLMG 136
G
Sbjct: 128 ARFG 131
Score = 29.4 bits (66), Expect = 2.4
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 190 LGQMIGTSRTMDMISLGRHITAREALDWGLCNKMVNCGTAVGEAMTRAIQMSKLSQSMLA 249
+ +++G + ++ L R A++ALD GL N +V E + ++ L +S +A
Sbjct: 149 MARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREI--LQKSPMA 206
Query: 250 DR 251
R
Sbjct: 207 IR 208
>gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme
metabolism].
Length = 282
Score = 49.7 bits (119), Expect = 6e-07
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQ-EGN--FCSGFD---- 77
I I++NRP+ NA KT+D + + DD + +L G +G+ FCSG D
Sbjct: 29 IAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVR 88
Query: 78 -----LHELDENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEEN 132
+ D P + D R P KP+IA + GYA+G G L + CDL +N
Sbjct: 89 GDSGGYVDDDGIPRLNVLDLQRLIRTMP--KPVIAMVAGYAIGGGHVLHVVCDLTIAADN 146
Query: 133 VLMG 136
+ G
Sbjct: 147 AIFG 150
Score = 29.3 bits (66), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 190 LGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
L +++G + ++ L R A EALD GL N +V
Sbjct: 168 LARIVGQKKAREIWFLCRQYDAEEALDMGLVNTVV 202
>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 49.5 bits (119), Expect = 6e-07
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLH-------- 79
++LNRPD NA N + L + + D +L G FC+G DL+
Sbjct: 17 VTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGY 76
Query: 80 ELDEN-PDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDL 126
DEN D + D + + KP+IA + G A G+ L CD+
Sbjct: 77 SDDENRADARRLADMLRAIYR-CPKPVIARVHGDAYAGGMGLVAACDI 123
>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB.
Members represent alpha subunit of multifunctional
enzyme complex of the fatty acid degradation cycle.
Activities include: enoyl-CoA hydratase (EC 4.2.1.17),
dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8),
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35),
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A
representative is E. coli FadB. This model excludes the
FadJ family represented by SP:P77399 [Fatty acid and
phospholipid metabolism, Degradation].
Length = 714
Score = 49.4 bits (118), Expect = 1e-06
Identities = 49/227 (21%), Positives = 83/227 (36%), Gaps = 49/227 (21%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
I + + P +N + TL +L + + + + IL + F G D+ E
Sbjct: 16 GIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLG 75
Query: 84 N---PDTKLFDDFREFLQKPAKK------PIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
PD +L + F K P +AAI G A+G G + L D R ++
Sbjct: 76 LFALPDAEL-IQWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAK 134
Query: 135 MGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQMI 194
+G +P T+L +P T+ RL ++I
Sbjct: 135 IG------------------------LPETKLG-----------IMPGFGGTV-RLPRVI 158
Query: 195 GTSRTMDMISLGRHITAREALDWGLCNKMVNC---GTAVGEAMTRAI 238
G ++ I+ G+ A +AL G + +V G A + + AI
Sbjct: 159 GADNALEWIASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAI 205
>gnl|CDD|236908 PRK11423, PRK11423, methylmalonyl-CoA decarboxylase; Provisional.
Length = 261
Score = 47.7 bits (114), Expect = 2e-06
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGN--FCSGFDLHEL 81
I I+ N P K NA++ +D L + + E + IL G+ + +G D+HEL
Sbjct: 13 KIATITFNNPAKRNALSKVLIDDLMQALSDLNRP-EIRVVILRAPSGSKVWSAGHDIHEL 71
Query: 82 DE-NPDTKLFDD-FREFLQKPAK--KPIIAAITGYAVGQGLDLALWCDL 126
D +DD R+ L+ K KP+IA + G G +L + CDL
Sbjct: 72 PSGGRDPLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDL 120
>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional.
Length = 342
Score = 48.3 bits (116), Expect = 2e-06
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 27 LISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGN--FCSGFD---LHEL 81
+I+LNRP +NA++L+ + A+ + +EDD ++ G G FC+G D L+E
Sbjct: 15 VITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEG-AGERGFCAGGDIRALYEA 73
Query: 82 DENPDTKLFDDF-RE-----FLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLM 135
D D F RE L KP IA + G +G G+ ++ R V E M
Sbjct: 74 ARAGDPLAADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKM 133
Query: 136 G 136
Sbjct: 134 A 134
>gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex
subunit alpha; Reviewed.
Length = 708
Score = 48.4 bits (116), Expect = 3e-06
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 52/214 (24%)
Query: 24 NITLISLNRPD-KINAINLKTLDALQENIKRFEDDTE-SPLAILYGQEGNFCSGFDLHEL 81
NI +I+++ P K+N + + + ++ +K+ +D E + + G+ NF +G D++ L
Sbjct: 15 NIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINML 74
Query: 82 DENPDT-----------KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVE 130
+LF + P++AAI G +G GL+LAL C R
Sbjct: 75 AACKTAQEAEALARQGQQLFAEIEAL-----PIPVVAAIHGACLGGGLELALACHYRVCT 129
Query: 131 ENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRL 190
+ + + V L +P QL +P T +RL
Sbjct: 130 D-------DPKTV---------------LGLPEVQLG-----------LLPGSGGT-QRL 155
Query: 191 GQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
++IG S +DMI G+ + A++AL GL + +V
Sbjct: 156 PRLIGVSTALDMILTGKQLRAKQALKLGLVDDVV 189
>gnl|CDD|235938 PRK07112, PRK07112, polyketide biosynthesis enoyl-CoA hydratase;
Validated.
Length = 255
Score = 47.0 bits (112), Expect = 4e-06
Identities = 46/209 (22%), Positives = 73/209 (34%), Gaps = 54/209 (25%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
++ + L+RP+ N IN + + + + R E +L G FC G D + E
Sbjct: 13 DVCFLQLHRPEAQNTINDRLIAECMDVLDRCEHAATI--VVLEGLPEVFCFGADFSAIAE 70
Query: 84 NPDTK---------LFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVL 134
PD L+D + P IA + G G+ D+ +E
Sbjct: 71 KPDAGRADLIDAEPLYDLWHRLATGP--YVTIAHVRGKVNAGGIGFVAASDIVIADETAP 128
Query: 135 MGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVT--IRRLGQ 192
LS +L+ L IP C + IRR
Sbjct: 129 FS-------------LSE--LLFGL--------------------IPACVLPFLIRR--- 150
Query: 193 MIGTSRTMDMISLGRHITAREALDWGLCN 221
IGT + M + + +TA++A WGL +
Sbjct: 151 -IGTQKAHYMTLMTQPVTAQQAFSWGLVD 178
>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional.
Length = 268
Score = 46.6 bits (111), Expect = 5e-06
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
+ I LN P +NA + + L + + + D + + ++ G+ F +G DL ++E
Sbjct: 22 VLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEE- 80
Query: 85 PDTKLFDDF--REFLQKPAK----------KPIIAAITGYAVGQGLDLALWCDL 126
+ DDF R + + A+ KPI++AI G AVG GL AL D+
Sbjct: 81 ----MADDFEVRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADI 130
>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated.
Length = 265
Score = 46.3 bits (110), Expect = 7e-06
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 30 LNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDL------HELDE 83
L+R DK NA N + + L + + + D +L G+ +F +G DL +LD
Sbjct: 21 LSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADLDY 80
Query: 84 NPDTKLFDDFREFLQ-----KPAKKPIIAAITGYAVGQGLDLALWCDL 126
N + DD RE + K P +A + G A G L L CD+
Sbjct: 81 NTN---LDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDM 125
>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase.
Length = 381
Score = 44.7 bits (105), Expect = 3e-05
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 15 SSVCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCS 74
S V ++ ++ +++LNRP ++NA++ + L + FE+D L IL G FC+
Sbjct: 9 SQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCA 68
Query: 75 GFDLHELDENPD-------TKLFDD--FREFLQKPAKKPIIAAITGYAVGQGLDLALWCD 125
G D+ + + + F D ++ K ++ + G +G G +++
Sbjct: 69 GGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGR 128
Query: 126 LRFVEENVLMGF 137
R EN +
Sbjct: 129 FRIATENTVFAM 140
>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein.
Length = 379
Score = 43.6 bits (103), Expect = 6e-05
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 17 VCTKKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGF 76
V ++ + +I+LNRP ++N I+L + L E ++++E D L I+ G F +G
Sbjct: 13 VLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGG 72
Query: 77 DL---HELDENPDTKLFDDFREFLQ----KPAKKPIIAAITGYAVGQGLDLALWCDLRFV 129
DL ++ E+ D+ L +R + KK +A + G +G G L + R V
Sbjct: 73 DLKMFYDGRESDDSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVV 132
Query: 130 EEN 132
E
Sbjct: 133 TEK 135
>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional.
Length = 249
Score = 43.0 bits (102), Expect = 7e-05
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDEN 84
I ++++ P +NA+ AL + I D ++ + +L + F +G D+ EL
Sbjct: 12 IAEVTVDYP-PVNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT 70
Query: 85 PD-TKL-------FDDFREFLQKPAKKPIIAAITGYAVGQGLDLA 121
P T L F FR + P+IAA+ G+ +G G+ L
Sbjct: 71 PGFTALIDANRGCFAAFRAVYECA--VPVIAAVHGFCLGGGIGLV 113
>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase;
Validated.
Length = 275
Score = 42.7 bits (101), Expect = 1e-04
Identities = 49/228 (21%), Positives = 75/228 (32%), Gaps = 83/228 (36%)
Query: 25 ITLISLNRPDKINAIN-------LKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFD 77
I ++LNRP+K NA++ + LDAL E D ++ + +L G + +G D
Sbjct: 18 IAWVTLNRPEKRNAMSPTLNREMIDVLDAL-------EFDDDAGVLVLTGAGDAWSAGMD 70
Query: 78 LHELDENPDTKLFDDFREFLQKPA--------------------KKPIIAAITGYAVGQG 117
L E FRE +P +KP IA + G+ G G
Sbjct: 71 LKEY-----------FRETDAQPEILQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGG 119
Query: 118 LDLALWCDLRFVEENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSR- 176
+ CDL + G LS
Sbjct: 120 FSPLVACDLAIAADEAQFG-------------------------------------LSEI 142
Query: 177 DLAIPTCDVTIRRLGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
+ IP + + +G + I G T R+A + GL N+ V
Sbjct: 143 NWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVNESV 190
>gnl|CDD|183293 PRK11730, fadB, multifunctional fatty acid oxidation complex
subunit alpha; Reviewed.
Length = 715
Score = 43.3 bits (103), Expect = 1e-04
Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 54/209 (25%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDE 83
I + + P +N ++ TL +L E + E ++ +L + F G D+ E
Sbjct: 16 GIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLS 75
Query: 84 N---PDTKL----------FDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVE 130
P+ +L F+ E L P P +AAI GYA+G G + L D R
Sbjct: 76 LFAAPEEELSQWLHFANSIFNRL-EDL--PV--PTVAAINGYALGGGCECVLATDYRVAS 130
Query: 131 ENVLMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRL 190
+ +G P T+L +P T+ RL
Sbjct: 131 PDARIGL------------------------PETKLG-----------IMPGFGGTV-RL 154
Query: 191 GQMIGTSRTMDMISLGRHITAREALDWGL 219
++IG ++ I+ G+ + A +AL G
Sbjct: 155 PRLIGADNALEWIAAGKDVRAEDALKVGA 183
>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 42.4 bits (100), Expect = 1e-04
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHE-LDENPD 86
++L+ P NA++ + + L + ++ D +L G FC+G DL E D
Sbjct: 19 LTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGD 78
Query: 87 TK---------LFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDL 126
+ R ++ P KP+IAAI G+ G L CD+
Sbjct: 79 PYDAAVARAREMTALLRAIVELP--KPVIAAIDGHVRAGGFGLVGACDI 125
>gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase;
Validated.
Length = 249
Score = 40.0 bits (94), Expect = 7e-04
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 25 ITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHEL--D 82
I +++ NA + + D L E D + IL G F +G L
Sbjct: 15 IAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSL 74
Query: 83 ENPDTKLFDD--FREFLQKPAKKPIIAAITGYAVGQGLDLALWCD 125
+ + + L P P+IAA+ G+A+G GL L L+ D
Sbjct: 75 QTGKGTFTEANLYSLALNCPI--PVIAAMQGHAIGGGLVLGLYAD 117
>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein.
Length = 407
Score = 38.4 bits (89), Expect = 0.003
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 30 LNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDENPDTKL 89
LNRP +NA+ + + L+ + +E++ + ++ G FCSG D+ L +
Sbjct: 57 LNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGN 116
Query: 90 FDDFREFLQKPAK---------KPIIAAITGYAVGQGLDLALWCDLRFVEENVL------ 134
++ + F + K KP +A + G +G G +++ R V + +
Sbjct: 117 VEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEV 176
Query: 135 -MGFY 138
MGF+
Sbjct: 177 QMGFH 181
>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein.
Length = 401
Score = 35.8 bits (82), Expect = 0.024
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 30 LNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCSGFDLHELDENPDTKL 89
LNRP +NA+ LQ+ K +E+D ++ G FC+G D+ L
Sbjct: 52 LNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGS 111
Query: 90 FDDFREFLQKPAK---------KPIIAAITGYAVGQGLDLALWCDLR-------FVEENV 133
D REF KP +A + G +G G +++ R F
Sbjct: 112 PDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPET 171
Query: 134 LMGFY 138
++GF+
Sbjct: 172 IIGFH 176
>gnl|CDD|235384 PRK05274, PRK05274, 2-keto-3-deoxygluconate permease; Provisional.
Length = 326
Score = 34.1 bits (79), Expect = 0.068
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 10/49 (20%)
Query: 72 FCSGFDLHELDENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDL 120
GF L LD + R+FL K P++ +A+G G+DL
Sbjct: 180 LLVGFILGNLDP--------ELRQFLGKAV--PVLIPFFAFALGNGIDL 218
>gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated.
Length = 302
Score = 33.1 bits (76), Expect = 0.15
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 23/122 (18%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYG-----QEGN--FCSGFDL-- 78
I+ +RP+ NA T+D L + + +L G ++G FCSG D
Sbjct: 38 IAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRI 97
Query: 79 -----HELDENPDTKLFDDFR---------EFLQKPAKKPIIAAITGYAVGQGLDLALWC 124
++ E + D R + L + K +IA + G+A G G L + C
Sbjct: 98 RGRDGYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVC 157
Query: 125 DL 126
DL
Sbjct: 158 DL 159
Score = 31.9 bits (73), Expect = 0.34
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 190 LGQMIGTSRTMDMISLGRHITAREALDWGLCNKMV 224
L + +G ++ LGR +A EA D G N +V
Sbjct: 188 LARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVV 222
>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional.
Length = 255
Score = 32.8 bits (75), Expect = 0.17
Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 47/211 (22%)
Query: 24 NITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGN-FCSGFDLHELD 82
++ ++LNRP+ N N+ + E ++ E+D S +L G F G DL E+
Sbjct: 11 DLATLTLNRPEVSNGFNIPMCQEILEALRLAEED-PSVRFLLINANGKVFSVGGDLVEMK 69
Query: 83 ---ENPDTKLFDDFREFLQ------KPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENV 133
+ D + E + K KP+I + G G ++A+ D
Sbjct: 70 RAVDEDDVQSLVKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKT 129
Query: 134 LMGFYNRRFVYLKDSLLSSGVVLYALHVPRTQLKHSLRDNLSRDLAIPTCDVTIRRLGQM 193
+ + FV + + + G+ L L+R
Sbjct: 130 K---FIQAFVGVGLAPDAGGLFL-----------------LTRA---------------- 153
Query: 194 IGTSRTMDMISLGRHITAREALDWGLCNKMV 224
IG +R + G +TA +AL++G ++
Sbjct: 154 IGLNRATHLAMTGEALTAEKALEYGFVYRVA 184
>gnl|CDD|236338 PRK08788, PRK08788, enoyl-CoA hydratase; Validated.
Length = 287
Score = 30.6 bits (70), Expect = 1.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 106 IAAITGYAVGQGLDLALWCDLRFVEENVLMGF 137
IA + G A+G G + AL E MGF
Sbjct: 125 IALVQGDALGGGFEAALSHHTIIAERGAKMGF 156
>gnl|CDD|236869 PRK11168, glpC, sn-glycerol-3-phosphate dehydrogenase subunit C;
Provisional.
Length = 396
Score = 30.2 bits (69), Expect = 1.3
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
Query: 229 AVGEAMTRAIQMSKLSQSMLADRATVLSECETCR 262
A+G + R I+ S AD V+++CETC+
Sbjct: 347 AIGAPLFRQIEESG------AD--LVVTDCETCK 372
>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA
hydrolase. Members of this protein family are
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a
ring-hydrolyzing enzyme in the anaerobic metabolism of
aromatic enzymes by way of benzoyl-CoA, as seen in
Thauera aromatica, Geobacter metallireducens, and
Azoarcus sp. Note that Rhodopseudomonas palustris uses a
different pathway to perform a similar degradation of
benzoyl-CoA to 3-hydroxpimelyl-CoA.
Length = 360
Score = 29.9 bits (67), Expect = 1.9
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGN--FCSGFDLHELDE-- 83
I L+ P + N+ + A+ +R D +A+++ G+ FC+G + E E
Sbjct: 41 IILDNPKQYNSYTTDMVKAIILAFRRASSD-RDVVAVVFTAVGDKAFCTGGNTKEYAEYY 99
Query: 84 --NPD-----TKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDL 126
NP +LF+D + KP+I + G +G G ++ + D
Sbjct: 100 AGNPQEYRQYMRLFNDMVSAILG-CDKPVICRVNGMRIGGGQEIGMAADF 148
>gnl|CDD|218160 pfam04587, ADP_PFK_GK, ADP-specific Phosphofructokinase/Glucokinase
conserved region. In archaea a novel type of glycolytic
pathway exists that is deviant from the classical
Embden-Meyerhof pathway. This pathway utilises two novel
proteins: an ADP-dependent Glucokinase and an
ADP-dependent Phosphofructokinase. This conserved region
is present at the C-terminal of both these proteins.
Interestingly this family contains sequences from higher
eukaryotes..
Length = 444
Score = 29.3 bits (66), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 76 FDLHELDENPDTKLFDDFREFLQKPAKKPIIAAITGYAVGQGLDL 120
F + DENP ++ ++ REFL++ ++ +A ++G Q L L
Sbjct: 182 FIVSADDENPRLEIKEELREFLEEIGEQVDLAILSGL---QMLTL 223
>gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA
hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA
hydratase, also called dienoyl-CoA hydratase, acts on
the product of benzoyl-CoA reductase (EC 1.3.99.15).
Benzoyl-CoA is a common intermediate in the degradation
of many aromatic compounds, and this enzyme is part of
an anaerobic pathway for dearomatization and
degradation.
Length = 251
Score = 28.4 bits (63), Expect = 4.7
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 17/118 (14%)
Query: 28 ISLNRPDKINAINLKTLDALQENIKRFEDDTESPL--AILYGQEG-NFCSGFDLHELDEN 84
+ L RP K N ++ + AL + + E A+L EG +F G + E
Sbjct: 14 LRLARP-KANIVDAAMIAALSAALG---EHLEDSALRAVLLDAEGPHFSFGASVAE--HM 67
Query: 85 PDT------KLFDDFREFLQKPAKKPIIAAITGYAVGQGLDLALWCDLRFVEENVLMG 136
PD L L P PI+ A+ G +G GL++A +L F + +G
Sbjct: 68 PDQCAAMLASLHKLVIAMLDSPV--PILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLG 123
>gnl|CDD|222212 pfam13545, HTH_Crp_2, Crp-like helix-turn-helix domain. This
family represents a crp-like helix-turn-helix domain
that is likely to bind DNA.
Length = 72
Score = 26.4 bits (59), Expect = 5.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 170 LRDNLSRDLAIPTCDVTIRRLGQMIGTSRT 199
L D L D + +T L M+G SR+
Sbjct: 10 LADRLGSDGNLLELPLTQEDLADMLGVSRS 39
>gnl|CDD|218115 pfam04502, DUF572, Family of unknown function (DUF572). Family of
eukaryotic proteins with undetermined function.
Length = 321
Score = 28.2 bits (63), Expect = 6.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 266 MSERK---HYIGISFELKFLQKKKKAKNGHLVHR---PFPI-CK 302
M ERK Y F+ + ++K+ KNG LV R PF + C
Sbjct: 1 MGERKVLNKYYPPDFDPSKIPRRKRPKNGQLVVRFMAPFNMRCD 44
>gnl|CDD|213787 TIGR03222, benzo_boxC, benzoyl-CoA-dihydrodiol lyase. In the
presence of O2, the benzoyl-CoA oxygenase/reductase
BoxBA BoxAB converts benzoyl-CoA to
2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this
family, BoxC, homologous to enoyl-CoA
hydratases/isomerases, hydrolyze this compound to
3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Length = 546
Score = 28.2 bits (63), Expect = 6.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 106 IAAITGYAVGQGLDLALWCD 125
+AA+ G G G +LAL CD
Sbjct: 123 LAAVNGTCAGGGYELALACD 142
>gnl|CDD|181274 PRK08184, PRK08184, benzoyl-CoA-dihydrodiol lyase; Provisional.
Length = 550
Score = 28.0 bits (63), Expect = 7.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 106 IAAITGYAVGQGLDLALWCD 125
IAA+ G G G +LAL CD
Sbjct: 127 IAAVNGTCAGGGYELALACD 146
>gnl|CDD|222831 PHA01747, PHA01747, putative ATP-dependent protease.
Length = 425
Score = 27.9 bits (62), Expect = 8.2
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 62 LAILYGQEGNFCSGFDLHELDENPDTKLFDDFREFL 97
L+ Q G F G D HEL E+ D +D +L
Sbjct: 75 LSATKFQNG-FTGGLDPHELAESVD-DFYDILNSYL 108
>gnl|CDD|184134 PRK13549, PRK13549, xylose transporter ATP-binding subunit;
Provisional.
Length = 506
Score = 28.0 bits (63), Expect = 8.3
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 24 NITLISLNRPDKINAINL-KTLDALQENIKRFEDDTESP-LAI 64
NITL +L+R + I+ L + E+I+R + T SP LAI
Sbjct: 361 NITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI 403
>gnl|CDD|215151 PLN02267, PLN02267, enoyl-CoA hydratase/isomerase family protein.
Length = 239
Score = 27.4 bits (61), Expect = 8.4
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 30/130 (23%)
Query: 18 CT-KKILNITLISLNRPDKINAINLKTLDALQENIKRFEDDTESPLAILYGQEGNFCS-G 75
CT +K N+ +++L + + +N +D+++ +++ + ++ EG F S G
Sbjct: 2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNG 60
Query: 76 FDL-------------HELDENPDTKLFDDFR----EFLQKPAKKPIIAAITGYAVGQGL 118
FDL H + R + + P P IAA+TG+A G
Sbjct: 61 FDLAWAQAAGSAPSRLHLMVAK--------LRPLVADLISLPM--PTIAAVTGHASAAGF 110
Query: 119 DLALWCDLRF 128
LAL D
Sbjct: 111 ILALSHDYVL 120
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.137 0.412
Gapped
Lambda K H
0.267 0.0795 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 16,028,808
Number of extensions: 1531445
Number of successful extensions: 1558
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1490
Number of HSP's successfully gapped: 147
Length of query: 314
Length of database: 10,937,602
Length adjustment: 97
Effective length of query: 217
Effective length of database: 6,635,264
Effective search space: 1439852288
Effective search space used: 1439852288
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (26.4 bits)