Query psy9498
Match_columns 240
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Fri Aug 16 20:55:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9498.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9498hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2etsa1 a.24.26.1 (A:1-110) Hy 3.8 78 0.0057 22.0 -0.6 10 229-238 74-83 (110)
2 d2huja1 a.24.26.1 (A:1-120) Hy 3.6 86 0.0063 22.1 -0.5 10 229-238 79-88 (120)
3 d2im8a1 a.24.26.1 (A:1-123) Hy 3.3 85 0.0062 22.1 -0.8 10 229-238 82-91 (123)
4 d1wuma1 a.29.2.1 (A:715-832) P 1.7 2.1E+02 0.015 18.3 -0.5 12 4-15 49-60 (118)
5 d1e6ia_ a.29.2.1 (A:) GCN5 {Ba 1.5 2.2E+02 0.016 18.0 -0.8 11 5-15 40-50 (111)
6 d1eqfa1 a.29.2.1 (A:1359-1497) 1.3 2.5E+02 0.018 18.5 -0.8 12 4-15 62-73 (139)
7 d3d7ca1 a.29.2.1 (A:731-832) G 1.3 2.6E+02 0.019 17.3 -0.8 11 5-15 39-49 (102)
8 d1eqfa2 a.29.2.1 (A:1498-1625) 1.2 2.7E+02 0.02 18.1 -0.8 12 4-15 46-57 (128)
9 d2gm6a1 b.82.1.19 (A:11-202) C 1.2 7.1E+02 0.051 16.9 1.5 10 137-146 182-191 (192)
10 d1sqia2 d.32.1.3 (A:157-366) 4 1.2 5.1E+02 0.037 18.3 0.6 6 234-239 177-182 (210)
No 1
>d2etsa1 a.24.26.1 (A:1-110) Hypothetical protein MW1337 {Staphylococcus aureus [TaxId: 1280]}
Probab=3.83 E-value=78 Score=22.01 Aligned_cols=10 Identities=40% Similarity=0.723 Sum_probs=7.3
Q ss_pred hhhhcceeec
Q psy9498 229 AETLSLQCFT 238 (240)
Q Consensus 229 aetlslqcft 238 (240)
.+.|++|||-
T Consensus 74 ~e~lsVq~f~ 83 (110)
T d2etsa1 74 IEQLSVECHF 83 (110)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 4677888884
No 2
>d2huja1 a.24.26.1 (A:1-120) Hypothetical protein Lin2004 {Listeria innocua [TaxId: 1642]}
Probab=3.57 E-value=86 Score=22.11 Aligned_cols=10 Identities=10% Similarity=0.368 Sum_probs=7.3
Q ss_pred hhhhcceeec
Q psy9498 229 AETLSLQCFT 238 (240)
Q Consensus 229 aetlslqcft 238 (240)
.+.|++|||-
T Consensus 79 ~e~lsVq~f~ 88 (120)
T d2huja1 79 VQMTAVSAFN 88 (120)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 4677888884
No 3
>d2im8a1 a.24.26.1 (A:1-123) Hypothetical protein YppE {Bacillus subtilis [TaxId: 1423]}
Probab=3.27 E-value=85 Score=22.11 Aligned_cols=10 Identities=30% Similarity=0.325 Sum_probs=6.9
Q ss_pred hhhhcceeec
Q psy9498 229 AETLSLQCFT 238 (240)
Q Consensus 229 aetlslqcft 238 (240)
.+.||+|||-
T Consensus 82 ~e~lsVq~f~ 91 (123)
T d2im8a1 82 FLELVLQSYV 91 (123)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 4567888874
No 4
>d1wuma1 a.29.2.1 (A:715-832) P300/CAF histone acetyltransferase bromodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.66 E-value=2.1e+02 Score=18.30 Aligned_cols=12 Identities=33% Similarity=0.612 Sum_probs=7.7
Q ss_pred cCCCCCCCCcee
Q psy9498 4 ILPNPTDLSTVE 15 (240)
Q Consensus 4 ilpnptdlstve 15 (240)
|+.+|.||++++
T Consensus 49 iI~~PmdL~~I~ 60 (118)
T d1wuma1 49 VIRFPMDLKTMS 60 (118)
T ss_dssp TCSSCCCHHHHH
T ss_pred HcCChhhHHHHH
Confidence 456677776665
No 5
>d1e6ia_ a.29.2.1 (A:) GCN5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=1.46 E-value=2.2e+02 Score=17.96 Aligned_cols=11 Identities=55% Similarity=0.869 Sum_probs=5.6
Q ss_pred CCCCCCCCcee
Q psy9498 5 LPNPTDLSTVE 15 (240)
Q Consensus 5 lpnptdlstve 15 (240)
+.+|-||++++
T Consensus 40 I~~PmdL~tI~ 50 (111)
T d1e6ia_ 40 IKEPMDLSTME 50 (111)
T ss_dssp CSSCCCHHHHH
T ss_pred cCCchhHHHHH
Confidence 34555555543
No 6
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.33 E-value=2.5e+02 Score=18.51 Aligned_cols=12 Identities=42% Similarity=0.772 Sum_probs=6.9
Q ss_pred cCCCCCCCCcee
Q psy9498 4 ILPNPTDLSTVE 15 (240)
Q Consensus 4 ilpnptdlstve 15 (240)
|+.+|.||++++
T Consensus 62 iI~~PmdL~tI~ 73 (139)
T d1eqfa1 62 IITRPMDLQTLR 73 (139)
T ss_dssp HCSSCCCHHHHH
T ss_pred HcCChhhHHHHH
Confidence 445666666653
No 7
>d3d7ca1 a.29.2.1 (A:731-832) GCN5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.26 E-value=2.6e+02 Score=17.32 Aligned_cols=11 Identities=36% Similarity=0.564 Sum_probs=5.7
Q ss_pred CCCCCCCCcee
Q psy9498 5 LPNPTDLSTVE 15 (240)
Q Consensus 5 lpnptdlstve 15 (240)
+.+|.||++++
T Consensus 39 I~~PmdL~tI~ 49 (102)
T d3d7ca1 39 IRFPIDLKTMT 49 (102)
T ss_dssp CSSCCCHHHHH
T ss_pred cCCccCHHHHH
Confidence 34555555543
No 8
>d1eqfa2 a.29.2.1 (A:1498-1625) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.21 E-value=2.7e+02 Score=18.07 Aligned_cols=12 Identities=42% Similarity=0.827 Sum_probs=6.5
Q ss_pred cCCCCCCCCcee
Q psy9498 4 ILPNPTDLSTVE 15 (240)
Q Consensus 4 ilpnptdlstve 15 (240)
++.+|-||++++
T Consensus 46 vIk~PmDL~tI~ 57 (128)
T d1eqfa2 46 VIVNPMDLETIR 57 (128)
T ss_dssp HCSSCCCHHHHH
T ss_pred HcCCcccHHHHH
Confidence 345566666554
No 9
>d2gm6a1 b.82.1.19 (A:11-202) Cysteine dioxygenase type I {Ralstonia eutropha [TaxId: 106590]}
Probab=1.18 E-value=7.1e+02 Score=16.92 Aligned_cols=10 Identities=80% Similarity=1.225 Sum_probs=6.0
Q ss_pred CCCCCCCCCC
Q psy9498 137 PSLPNPTDRS 146 (240)
Q Consensus 137 pslpnptdrs 146 (240)
|-+||+-|||
T Consensus 182 ~~~~~~~~~~ 191 (192)
T d2gm6a1 182 PYLPNPWDRS 191 (192)
T ss_dssp SCCCCCCCCC
T ss_pred CCCCCccccC
Confidence 4566666665
No 10
>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.17 E-value=5.1e+02 Score=18.25 Aligned_cols=6 Identities=83% Similarity=1.016 Sum_probs=0.0
Q ss_pred ceeecc
Q psy9498 234 LQCFTK 239 (240)
Q Consensus 234 lqcftk 239 (240)
||+|||
T Consensus 177 lqifT~ 182 (210)
T d1sqia2 177 LQIFTK 182 (210)
T ss_dssp EEEEBC
T ss_pred EEEeec
Done!