RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9498
         (240 letters)



>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate
           dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId:
           5724]}
          Length = 362

 Score = 29.8 bits (66), Expect = 0.28
 Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 2/45 (4%)

Query: 153 LPDRSTAETPSLPNPTDLSTVETPSVPSPTDRSTAETPSLPSPTD 197
           +P  ST +   +P+  +LST               + P + +   
Sbjct: 17  IPGLSTVD--CIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQ 59


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.300    0.120    0.340 

Gapped
Lambda     K      H
   0.267   0.0623    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 777,125
Number of extensions: 33953
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 5
Length of query: 240
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 157
Effective length of database: 1,268,006
Effective search space: 199076942
Effective search space used: 199076942
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 51 (23.6 bits)