BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy950
(407 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 196 bits (498), Expect = 3e-49, Method: Composition-based stats.
Identities = 111/295 (37%), Positives = 170/295 (57%), Gaps = 25/295 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P R L+W DYGQ P+I +S+LD + T +VS GI PR L +D T +YWVD LDLI
Sbjct: 2200 PKHRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLI 2259
Query: 102 QKISYNGGNRQIIR--RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I +GG Q++R P P GI V + WVDRNL+ V++ASK N P IR
Sbjct: 2260 ARIHLDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLKKVFQASK-QPGNTDPPVVIR 2318
Query: 160 TGLSGLRDIAIFDIVNQP--PDE--NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
++ LRD+ IFD QP P E NNPC ++ NGGC CF+ P E P +C CA
Sbjct: 2319 DKINLLRDVTIFDEHAQPLSPAELNNNPCLQS-NGGCSHFCFALP-ELPTP----RCGCA 2372
Query: 216 TGTPSASDPKKC-TTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYAD 274
GT +D K C T+ +++L++S +R+LH DP ++PF+ +S + +++D +
Sbjct: 2373 FGT-LGNDGKSCATSQEDFLIYSLNNSLRSLHFDPRDHSLPFQVISVAGTAIALDYDRRN 2431
Query: 275 DKILFTQ----IRPWAKIAWIP----TTNPSSASSNLTNVVGVEFDYADDKILFT 321
++I FTQ +R +I+++ +++P+ SN+ G+ FD+ + +I ++
Sbjct: 2432 NRIFFTQKLNSLR--GQISYVSLYSGSSSPTVLLSNIGVTDGIAFDWINRRIYYS 2484
Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 19/253 (7%)
Query: 40 FSPLPRLLYWIDYGQY---PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA 96
P L++ D+G P++ ++++DGS +V+ + P +T+D+ + VYWVD+
Sbjct: 516 LDPTVGYLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDS 575
Query: 97 KLDLIQKISYNGGNRQIIRRN---LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNIT 153
+ D I+ ++Y+G R+ + R +P+P GI++ + V++ D V KASK TN
Sbjct: 576 RYDYIETVTYDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKASKFTETN-- 633
Query: 154 LPTPIRTGLSGLR--DIAIFDIVNQPPDENNPCFRTGNGGCEQLC-FSYPVEFPQNKLHY 210
P S LR + ++ + Q P+ NPC + NGGC Q+C S+ + L Y
Sbjct: 634 ---PQVYHQSSLRPHGVTVYHALRQ-PNATNPC-GSNNGGCAQVCVLSHRTD--NGGLGY 686
Query: 211 KCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVE 269
+C C G D +C + +L+FS++T +R + T V + + VG++
Sbjct: 687 RCKCEFGFELDDDEHRCVAVKNFLLFSSKTAVRGIPFTLSTQEDVMVPVTGSPSFFVGID 746
Query: 270 FDYADDKILFTQI 282
FD + ++ +
Sbjct: 747 FDAQHSTVFYSDL 759
Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 28/268 (10%)
Query: 28 KTSFRSANTTSP--FSPLPRL----LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRD 81
+T S N T P + PR+ ++W D+G +PRI ++ +DG+ T IV I P
Sbjct: 1544 RTVLISKNVTKPRGLALDPRMGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCG 1603
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRN--LPNPMGIAVHKSDVYWVDRNL 138
L+ID +Y++DA LD I+ Y+G N RQ+I + L +P + + + VYW DR
Sbjct: 1604 LSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIASDLVLHHPHALTLFEDFVYWTDRGT 1663
Query: 139 RTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFS 198
R V +A+K N ++ + + I QPP NPC + C LC
Sbjct: 1664 RQVMQANKWHGGNQSV---VMYSVHQPLGITAIHPSRQPPSR-NPC---ASASCSHLCL- 1715
Query: 199 YPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTE-IRALHLDPTLTA---- 253
+ P+ HY C C +G + D C D+ + S R I + LDP + +
Sbjct: 1716 LSAQAPR---HYSCACPSGWNLSDDSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSNDAM 1772
Query: 254 VPFKTVSNLTNVVGVEFDYADDKILFTQ 281
VP +S + + VEFD ++ I + +
Sbjct: 1773 VP---ISGIQHGYDVEFDDSEQFIYWVE 1797
Score = 85.5 bits (210), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW D+G +I ++ L G+ IV+ + P L +D++T +YW DA L
Sbjct: 2515 LDPCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQ 2574
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTN-ITLPTPI 158
I++ + G NR+++ + G+ V+ +YW D R +Y+A+K ++ + + T +
Sbjct: 2575 KIERSTLTGTNREVVVSTAFHSFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAMTTRL 2634
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYP 200
T SG+ + + Q +NPC + NGGC +C P
Sbjct: 2635 PTQPSGISTV----VKTQRQQCSNPCDQF-NGGCSHICAPGP 2671
Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D+G + IG+ +DG+ + I+S I P +TID +YW DA L I+
Sbjct: 3337 VYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDL 3396
Query: 107 NGGNRQIIRR-NLPNPMGIAVHKSDVYWVDRNLRTVYKASKL-ASTNITLPTPIRTGLSG 164
G +R + +LP+P + + + V+W D N RTV K +K S + L
Sbjct: 3397 EGHHRHTVYDGSLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPF-- 3454
Query: 165 LRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCF 197
DI ++ QP +NPC T NGGC LC
Sbjct: 3455 --DIHVYHPYRQPI-MSNPC-GTNNGGCSHLCL 3483
Score = 82.0 bits (201), Expect = 7e-15, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHD-VYWVDAKLD 99
+P L++W D G+ P+I ++++G + +VS + P L+ID D VYW D+K D
Sbjct: 4195 NPKLGLMFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKED 4254
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I+ I Y+G +R++I P + + + +YWV + V++ +K N +
Sbjct: 4255 VIEAIKYDGTDRRLIINEAMKPFSLDIFEDKLYWVAKEKGEVWRQNKFGKENKEKVLVVN 4314
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L+ +R IF + +NPC + C LC P Y C C G+
Sbjct: 4315 PWLTQVR---IFHQLRYNQSVSNPCKQV----CSHLCLLRPG-------GYSCACPQGS 4359
Score = 82.0 bits (201), Expect = 7e-15, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 33/293 (11%)
Query: 47 LYWIDYGQ----YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
LYW D+G +I + +DG+ + + + +T+D+Q +YW +I+
Sbjct: 1886 LYWSDHGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRGVIE 1945
Query: 103 KISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGL 162
+ + +G R I+ +L +P G+ V+ S +Y+ D + + K + N + +R +
Sbjct: 1946 RGNVDGTERMILVHHLAHPWGLVVYGSFLYYSDEQYEVIERVDKSSGNNKVV---LRDNV 2002
Query: 163 SGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222
LR + ++ N D +N C N C+Q+C P + C CA+G +
Sbjct: 2003 PYLRGLRVYHRRN-AADSSNGCSNNPN-ACQQICLPVPGGM------FSCACASGFKLSP 2054
Query: 223 DPKKCTTMDEYLVFSTRTEIRALHL---DPTLTAVPFKTVSNLTNVVGVEFDYADDKILF 279
D + C+ + ++V S +R L D + VP NV+ + D A+ I +
Sbjct: 2055 DGRSCSPYNSFMVVSMLPAVRGFSLELSDHSEAMVP--VAGQGRNVLHADVDVANGFIYW 2112
Query: 280 TQIRPWAKIA-WIPTTNPSSASSNLTNVV----------GVEFDYADDKILFT 321
+ + I P SN TNVV GV D+A + FT
Sbjct: 2113 CDFSSSVRSSNGIRRIKPD--GSNFTNVVTYGIGANGIRGVALDWAAGNLYFT 2163
Score = 72.0 bits (175), Expect = 8e-12, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 18 LRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS 77
LRL K ++ S + + P ++ D+ + +I +++ DGS IV+ +
Sbjct: 810 LRLADKSRRQIISNLNNPRSIVVHPTAGYMFLSDWFRPAKIMRAWSDGSHLMPIVNTSLG 869
Query: 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRR--NLPNPMGIAVHKSDVYWVD 135
P L ID +YWVDA D I+ + +G +R+ + + +P G+ V K +V+ D
Sbjct: 870 WPNGLAIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQMTHPFGLTVFKDNVFITD 929
Query: 136 RNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT--GNGGCE 193
L + + K ++T+ IR G+S + + +D Q +N C +T NG C
Sbjct: 930 WRLGAIIRVRKSDGGDMTV---IRRGISSVMHVKAYDADLQ--TGSNYCSQTTHANGDCS 984
Query: 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKC 227
CF P C C G D C
Sbjct: 985 HFCFPVP------NFQRVCGCPYGMKLQRDQMTC 1012
Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F + + LYWID + I + +L+ + +I+++ + L +D + +YW+DA LD
Sbjct: 3236 FDRVEKRLYWID-AEKQIIERMFLNKTNRETIINHRLRRAESLAVDWVSRKLYWLDAILD 3294
Query: 100 LIQKISYNGGNRQIIRRN---------LPNPMGIAVH--KSDVYWVD 135
+ G +R++I ++ +P GI +H + VYW D
Sbjct: 3295 CLFVSDLEGRHRKMIAQHCVDANNTFCFEHPRGIVLHPQRGHVYWAD 3341
Score = 39.3 bits (90), Expect = 0.059, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN 117
I K +DG+ I +N + LT D + ++YW D L + + +R+ I N
Sbjct: 764 IYKQKIDGTGKEVITANRLESVECLTFDWISRNLYWTDGGLKSVTVLRLADKSRRQIISN 823
Query: 118 LPNPMGIAVHKSDVY 132
L NP I VH + Y
Sbjct: 824 LNNPRSIVVHPTAGY 838
Score = 35.4 bits (80), Expect = 0.74, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 64 DGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPM 122
DGS + S++ G+ L D +YW+DA+ +I+++ N NR+ II L
Sbjct: 3217 DGSSY-SLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNRETIINHRLRRAE 3275
Query: 123 GIAVH--KSDVYWVDRNLRTVY 142
+AV +YW+D L ++
Sbjct: 3276 SLAVDWVSRKLYWLDAILDCLF 3297
Score = 35.0 bits (79), Expect = 0.95, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKS---YLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA 96
F + ++W D Q GK+ + +G+ + +G+S+ + +D ++YW D
Sbjct: 1474 FDSVTGRVFWSDLLQ----GKTWSVFQNGTDKRVVHDSGLSVTEMIAVDWIGRNLYWTDY 1529
Query: 97 KLDLIQKISYNGGNRQI-IRRNLPNPMGIAV 126
L+ I+ +G +R + I +N+ P G+A+
Sbjct: 1530 ALETIEVSKIDGSHRTVLISKNVTKPRGLAL 1560
Score = 32.0 bits (71), Expect = 9.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 79 PRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVHKS--DVYWVD 135
P L +D +YW DAK I+ + +G R+ +I L P IAV+ ++W D
Sbjct: 4146 PDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTD 4205
Query: 136 R 136
+
Sbjct: 4206 Q 4206
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 196 bits (497), Expect = 3e-49, Method: Composition-based stats.
Identities = 113/293 (38%), Positives = 168/293 (57%), Gaps = 21/293 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P R L+W DYGQ P+I +S+LD + T +VS GI PR L +D T +YWVD LD+I
Sbjct: 2200 PKHRYLFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDII 2259
Query: 102 QKISYNGGNRQIIR--RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I +GG Q++R P P GI V + WVDRNLR V++ASK N PT IR
Sbjct: 2260 ARIHRDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLRKVFQASK-QPGNTDPPTVIR 2318
Query: 160 TGLSGLRDIAIFDIVNQP--PDE--NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
++ LRD+ IFD QP P E NNPC ++ NGGC CF+ P E P KC CA
Sbjct: 2319 DSINLLRDVTIFDEHVQPLSPAELNNNPCLQS-NGGCSHFCFALP-ELPTP----KCGCA 2372
Query: 216 TGTPSASDPKKC-TTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYAD 274
GT D K C T+ +++L++S +R+LH DP +PF+ +S + +++D +
Sbjct: 2373 FGTLE-DDGKNCATSREDFLIYSLNNSLRSLHFDPQDHNLPFQAISVEGMAIALDYDRRN 2431
Query: 275 DKILFTQ-IRPW-AKIAWIP----TTNPSSASSNLTNVVGVEFDYADDKILFT 321
++I FTQ + P +I+++ ++P+ SN+ G+ FD+ + +I ++
Sbjct: 2432 NRIFFTQKLNPIRGQISYVNLYSGASSPTILLSNIGVTDGIAFDWINRRIYYS 2484
Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats.
Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 21/294 (7%)
Query: 40 FSPLPRLLYWIDYGQY---PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA 96
P L++ D+G P++ ++++DGS +V+ + P +T+D+ + VYWVD+
Sbjct: 516 LDPTVGYLFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDS 575
Query: 97 KLDLIQKISYNGGNRQIIRRN---LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNIT 153
+ D I+ ++Y+G R+ + R +P+P GI++ + V++ D V KA+K TN
Sbjct: 576 RYDYIETVTYDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKANKFTDTN-- 633
Query: 154 LPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLC-FSYPVEFPQNKLHYKC 212
P + ++ + Q P+ NPC NGGC Q+C S+ + L Y+C
Sbjct: 634 -PQVYHQSSLTPFGVTVYHALRQ-PNATNPC-GNNNGGCAQICVLSHRTD--NGGLGYRC 688
Query: 213 DCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFD 271
C G +D C + +L+FS++T +R + T V + + VG++FD
Sbjct: 689 KCEFGFELDADEHHCVAVKNFLLFSSQTAVRGIPFTLSTQEDVMVPVTGSPSFFVGIDFD 748
Query: 272 YADDKILFTQIRPWAKIAW---IPTTNPSSASSN-LTNVVGVEFDYADDKILFT 321
I ++ + I + I T ++N L NV + FD+ + +T
Sbjct: 749 AQHSTIFYSDLS--KNIIYQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWT 800
Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 38/273 (13%)
Query: 28 KTSFRSANTTSP--FSPLPRL----LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRD 81
+T S N T P + PR+ ++W D+G +PRI ++ +DG+ T IV I P
Sbjct: 1544 RTVLISKNVTKPRGLALDPRMGDNVMFWSDWGHHPRIERASMDGTMRTVIVQEKIYWPCG 1603
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRN--LPNPMGIAVHKSDVYWVDRNL 138
L+ID +Y++DA LD I+ Y+G N RQ+I + L +P + + + V+W DR
Sbjct: 1604 LSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIASDLVLHHPHALTLFEDSVFWTDRGT 1663
Query: 139 RTVYKASKLASTN-----ITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCE 193
V +A+K N ++P P+ IAI ++ P NPC + C
Sbjct: 1664 HQVMQANKWHGRNQSVVMYSVPQPLGI-------IAIHP--SRQPSSPNPC---ASATCS 1711
Query: 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTE-IRALHLDPTLT 252
LC Q HY C C +G + D C D+ + S R I + LDP +
Sbjct: 1712 HLCLLS----AQEPRHYSCACPSGWNLSDDSVNCVRGDQPFLISVRENVIFGISLDPEVK 1767
Query: 253 A----VPFKTVSNLTNVVGVEFDYADDKILFTQ 281
+ VP +S + + VEFD ++ I + +
Sbjct: 1768 SNDAMVP---ISGIQHGYDVEFDDSEQFIYWVE 1797
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 22 KKKKKLKTSFRSANTTSPFS--------PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS 73
+++K L AN T F P +YW D+G + I + +DG+ T I+S
Sbjct: 3304 RQRKMLAQHCVDANNTFCFENPRGIVLHPQRGYVYWADWGDHAYIARIGMDGTNKTVIIS 3363
Query: 74 NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRR-NLPNPMGIAVHKSDVY 132
I P +TID +YW DA L I+ G +R + LP+P + + + V+
Sbjct: 3364 TKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDGTLPHPFALTIFEDTVF 3423
Query: 133 WVDRNLRTVYKASKL-ASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGG 191
W D N RTV K +K S + L DI + QP +NPC T NGG
Sbjct: 3424 WTDWNTRTVEKGNKYDGSGRVVLVNTTHKPF----DIHVLHPYRQPI-MSNPC-ATNNGG 3477
Query: 192 CEQLCF 197
C LC
Sbjct: 3478 CSHLCL 3483
Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 33/293 (11%)
Query: 47 LYWIDYGQ----YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
LYW D+G +I + +DG+ + + + +T+D+Q +YW +I+
Sbjct: 1886 LYWSDHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIE 1945
Query: 103 KISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGL 162
+ + +G R I+ +L +P G+ VH S +Y+ D + + K + +N + R +
Sbjct: 1946 RGNVDGTERMILVHHLAHPWGLVVHGSFLYYSDEQYEVIERVDKSSGSNKVV---FRDNI 2002
Query: 163 SGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222
LR + ++ N D +N C N C+Q+C P + C CA+G +
Sbjct: 2003 PYLRGLRVYHHRNA-ADSSNGCSNNPN-ACQQICLPVPGGM------FSCACASGFKLSP 2054
Query: 223 DPKKCTTMDEYLVFSTRTEIRALHL---DPTLTAVPFKTVSNLTNVVGVEFDYADDKILF 279
D + C+ + ++V S +R L D + VP NV+ + D A+ I +
Sbjct: 2055 DGRSCSPYNSFIVVSMLPAVRGFSLELSDHSEAMVP--VAGQGRNVLHADVDVANGFIYW 2112
Query: 280 TQIRPWAKIA-WIPTTNPSSASSNLTNVV----------GVEFDYADDKILFT 321
+ + I P+ SN TN+V GV D+ + FT
Sbjct: 2113 CDFSSSVRSSNGIRRIKPN--GSNFTNIVTYGIGANGIRGVAVDWVAGNLYFT 2163
Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHD-VYWVDAKLD 99
+P L++W D G+ P+I ++++G + + S + P L+ID D +YW D+K D
Sbjct: 4195 NPKLGLMFWTDQGKQPKIESAWMNGEHRSVLASANLGWPNGLSIDYLNGDRIYWSDSKED 4254
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I+ I Y+G +R++I + P + + + +YWV + V++ +K N +
Sbjct: 4255 VIESIKYDGTDRRLIINDAMKPFSLDIFEDQLYWVAKEKGEVWRQNKFGKGNKEKLLVVN 4314
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L+ +R IF + +NPC + C LC P Y C C G+
Sbjct: 4315 PWLTQVR---IFHQLRYNQSVSNPCKQV----CSHLCLLRPG-------GYSCACPQGS 4359
Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW D+G +I ++ L G+ IV+ + P LT+D++T +YW DA L
Sbjct: 2515 LDPCRGYMYWTDWGTNAKIERATLGGNFRVPIVNTSLVWPNGLTLDLETDLLYWADASLQ 2574
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTN-ITLPTPI 158
I++ + G NR+++ + G+ V+ +YW D + +Y+A+K ++ I + T +
Sbjct: 2575 KIERSTLTGSNREVVISTAFHSFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAMTTRL 2634
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYP 200
T SG+ + + Q +NPC + NGGC +C P
Sbjct: 2635 PTQPSGISTV----VKTQQQQCSNPCDQF-NGGCSHICAPGP 2671
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 34 ANTTSPFS----PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTH 89
+N +P S P ++ D+ + +I +++ DGS IV+ + P L ID T
Sbjct: 822 SNLNNPRSIVVHPAAGYMFLSDWFRPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTS 881
Query: 90 DVYWVDAKLDLIQKISYNGGNRQIIRR--NLPNPMGIAVHKSDVYWVDRNLRTVYKASKL 147
+YWVDA D I+ + +G +R+ + + +P G+ V K +V+ D L + + K
Sbjct: 882 RLYWVDAFFDKIEHSNLDGLDRKRLGHVDQMTHPFGLTVFKDNVFLTDWRLGAIIRVRKS 941
Query: 148 ASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQ 205
++T+ +R G+S + + +D Q N C +T NG C CF P
Sbjct: 942 DGGDMTV---VRRGISSIMHVKAYDADLQ--TGTNYCSQTTHPNGDCSHFCFPVP----- 991
Query: 206 NKLHYKCDCATGTPSASDPKKC 227
C C G D C
Sbjct: 992 -NFQRVCGCPYGMKLQRDQMTC 1012
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F + LYWID + I + +L+ + +I+S+ + L +D + +YW+DA LD
Sbjct: 3236 FDRVEERLYWID-AEKQIIERMFLNKTNQETIISHRLRRAESLAVDWVSRKLYWLDAILD 3294
Query: 100 LIQKISYNGGNRQIIRRN---------LPNPMGIAVH--KSDVYWVD 135
+ G R+++ ++ NP GI +H + VYW D
Sbjct: 3295 CLFVSDLEGRQRKMLAQHCVDANNTFCFENPRGIVLHPQRGYVYWAD 3341
Score = 35.8 bits (81), Expect = 0.56, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 63 LDGSKWTS---------IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQI 113
L+G W++ + +G+S+ + +D ++YW D L+ I+ +G +R +
Sbjct: 1487 LEGKTWSAFQNGTDKRVVHDSGLSLTEMIAVDWIGRNIYWTDYTLETIEVSKIDGSHRTV 1546
Query: 114 -IRRNLPNPMGIAV 126
I +N+ P G+A+
Sbjct: 1547 LISKNVTKPRGLAL 1560
Score = 33.5 bits (75), Expect = 2.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN 117
I + +DG+ I +N + L+ D + ++YW D + + +R+ I N
Sbjct: 764 IYQQKIDGTGKEVITANRLQNVECLSFDWISRNLYWTDGGSKSVTVMKLADKSRRQIISN 823
Query: 118 LPNPMGIAVHKSDVY 132
L NP I VH + Y
Sbjct: 824 LNNPRSIVVHPAAGY 838
Score = 33.5 bits (75), Expect = 3.4, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 63 LDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNP 121
+DG+ + S++ G+ L D +YW+DA+ +I+++ N N++ II L
Sbjct: 3216 IDGTSY-SLILQGLGNVVALDFDRVEERLYWIDAEKQIIERMFLNKTNQETIISHRLRRA 3274
Query: 122 MGIAVH--KSDVYWVDRNLRTVY 142
+AV +YW+D L ++
Sbjct: 3275 ESLAVDWVSRKLYWLDAILDCLF 3297
Score = 32.7 bits (73), Expect = 5.1, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 79 PRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVHKS--DVYWVD 135
P L +D +YW DAK I+ + +G R+ +I L P IAV+ ++W D
Sbjct: 4146 PDGLAVDWVGRHIYWSDAKSQRIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTD 4205
Query: 136 RNLRTVYKA--------SKLASTNITLP 155
+ + ++ S LAS N+ P
Sbjct: 4206 QGKQPKIESAWMNGEHRSVLASANLGWP 4233
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 166/294 (56%), Gaps = 23/294 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P R L+W DYGQ P+I +S+LD + T +VS GI PR L +D VYWVD LD+I
Sbjct: 2199 PKNRYLFWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDII 2258
Query: 102 QKISYNGGNRQIIR--RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I NG N ++IR P P GI V ++ + WVDRNL+ +++ASK N PT IR
Sbjct: 2259 ARIRINGENSEVIRYGSRYPTPYGITVFENSIIWVDRNLKKIFQASK-EPENTEPPTVIR 2317
Query: 160 TGLSGLRDIAIFDIVNQP--PDE--NNPCFRTGNGGCEQLCFSYPVEFPQNKLHY-KCDC 214
++ LRD+ IFD QP P E NNPC NGGC LCF+ P LH KCDC
Sbjct: 2318 DNINWLRDVTIFDKQVQPRSPAEVNNNPCLEN-NGGCSHLCFALP------GLHTPKCDC 2370
Query: 215 ATGTPSASDPKKCT-TMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYA 273
A GT SD K C + + +L+F+ +R+LHLDP + PF+T++ V+ +++D
Sbjct: 2371 AFGTLQ-SDGKNCAISTENFLIFALSNSLRSLHLDPENHSPPFQTINVERTVMSLDYDSV 2429
Query: 274 DDKILFTQ--IRPWAKIAWIPTTN----PSSASSNLTNVVGVEFDYADDKILFT 321
D+I FTQ +I++ ++ P+ +S + G+ FD+ +I ++
Sbjct: 2430 SDRIYFTQNLASGVGQISYATLSSGIHTPTVIASGIGTADGIAFDWITRRIYYS 2483
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 18/282 (6%)
Query: 49 WIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG 108
W P++ ++++DGS +V + P +T+DM + VYWVD++ D I+ ++Y+G
Sbjct: 529 WESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDG 588
Query: 109 GNRQIIRRN---LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
R+ + +P+P G+++ + V++ D V KA+K TN P + L
Sbjct: 589 IQRKTVVHGGSLIPHPFGVSLFEGQVFFTDWTKMAVLKANKFTETN-----PQVYYQASL 643
Query: 166 R--DIAIFDIVNQPPDENNPCFRTGNGGCEQLC-FSYPVEFPQNKLHYKCDCATGTPSAS 222
R + ++ + QP NPC + NGGCEQ+C S+ + + L ++C C G +
Sbjct: 644 RPYGVTVYHSLRQPY-ATNPC-KDNNGGCEQVCVLSHRTD--NDGLGFRCKCTFGFQLDT 699
Query: 223 DPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQ 281
D + C + +L+FS++ IR + T V N + VG++FD D I F+
Sbjct: 700 DERHCIAVQNFLIFSSQVAIRGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSD 759
Query: 282 IRPWA--KIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
+ K T A++ + NV + FD+ + +T
Sbjct: 760 MSKHMIFKQKIDGTGREILAANRVENVESLAFDWISKNLYWT 801
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 42/285 (14%)
Query: 18 LRLLKKKKKLKTSFRSANTTSP--FSPLPR----LLYWIDYGQYPRIGKSYLDGSKWTSI 71
+ + K +T S N T+P + PR LL+W D+G +PRI ++ +DGS T I
Sbjct: 1533 IEVSKIDGSHRTVLISKNLTNPRGLALDPRMNEHLLFWSDWGHHPRIERASMDGSMRTVI 1592
Query: 72 VSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRNL--PNPMGIAVHK 128
V + I P LTID +Y++D+ LD + YNG + RQ+I +L +P + + +
Sbjct: 1593 VQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFE 1652
Query: 129 SDVYWVDRNLRTVYKASK-------LASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDEN 181
VYW DR R V +A+K + NI P I +A+ ++ P+
Sbjct: 1653 DSVYWTDRATRRVMRANKWHGGNQSVVMYNIQWPLGI---------VAVH--PSKQPNSV 1701
Query: 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTE 241
NPC + C LC Q Y C C +G + D C D+ + + R
Sbjct: 1702 NPCAFS---RCSHLCLLS----SQGPHFYSCVCPSGWSLSPDLLNCLRDDQPFLITVRQH 1754
Query: 242 -IRALHLDPTLTA----VPFKTVSNLTNVVGVEFDYADDKILFTQ 281
I + L+P + + VP ++ + N + VEFD A+ I + +
Sbjct: 1755 IIFGISLNPEVKSNDAMVP---IAGIQNGLDVEFDDAEQYIYWVE 1796
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 23 KKKKLKTSFRSANTTSPF--------SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN 74
++ L AN T F P LYW D+G IG+ +DG+ + I+S
Sbjct: 3303 HRRMLAQHCVDANNTFCFDNPRGLALHPQYGYLYWADWGHRAYIGRVGMDGTNKSVIIST 3362
Query: 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYW 133
+ P +TID +YW DA L I+ G +R + LP+P I + + +YW
Sbjct: 3363 KLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDGALPHPFAITIFEDTIYW 3422
Query: 134 VDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCE 193
D N RTV K +K +N T + T DI ++ QP +NPC T NGGC
Sbjct: 3423 TDWNTRTVEKGNKYDGSN--RQTLVNTTHRPF-DIHVYHPYRQPI-VSNPC-GTNNGGCS 3477
Query: 194 QLCFSYP 200
LC P
Sbjct: 3478 HLCLIKP 3484
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P LYW D+ + +I ++ L G+ IV++ + MP LT+D + +YWVDA L
Sbjct: 2514 LDPCQGYLYWADWDTHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQ 2573
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKL-ASTNITLPTPI 158
I++ + G +R++I + G+ ++ +YW D + +Y+A+K S I + T +
Sbjct: 2574 RIERSTLTGVDREVIVNAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNL 2633
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYP 200
+ G+ + + NQ NNPC + NGGC +C P
Sbjct: 2634 LSQPRGINTV----VKNQKQQCNNPCEQF-NGGCSHICAPGP 2670
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 42 PLPRLLYWIDYGQY----PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAK 97
P LYW D G +I + +DG+ ++ + + +T+D++ +YW
Sbjct: 1880 PARGKLYWSDQGTDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTG 1939
Query: 98 LDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTP 157
+I++ + +G +R I+ L +P GIAVH S +Y+ D + + K N +
Sbjct: 1940 RGVIERGNVDGTDRMILVHQLSHPWGIAVHDSFLYYTDEQYEVIERVDKATGANKIV--- 1996
Query: 158 IRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATG 217
+R + LR + ++ N + +N C N C+Q+C P + C CATG
Sbjct: 1997 LRDNVPNLRGLQVYHRRN-AAESSNGCSNNMN-ACQQICLPVPGGL------FSCACATG 2048
Query: 218 TPSASDPKKCTTMDEYLVFSTRTEIRALHL---DPTLTAVP 255
D + C+ + ++V S + IR L D + T VP
Sbjct: 2049 FKLNPDNRSCSPYNSFIVVSMLSAIRGFSLELSDHSETMVP 2089
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHD-VYWVDAKLD 99
+P L++W D+G+ P+I ++++G +V + P L+ID +D +YW D K D
Sbjct: 4193 NPKLGLMFWTDWGKEPKIESAWMNGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKED 4252
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148
+I+ I Y+G +R++I + NP + + + +YW+ + V+K +K
Sbjct: 4253 VIETIKYDGTDRRVIAKEAMNPYSLDIFEDQLYWISKEKGEVWKQNKFG 4301
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 18 LRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS 77
+RL K ++ + + + P L++ D+ + +I +++ DGS +++ +
Sbjct: 811 MRLADKTRRTVVQYLNNPRSVVVHPFAGYLFFTDWFRPAKIMRAWSDGSHLLPVINTTLG 870
Query: 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRR--NLPNPMGIAVHKSDVYWVD 135
P L ID +YWVDA D I+ +++G +R+ + + +P G+A+ +++ D
Sbjct: 871 WPNGLAIDWAASRLYWVDAYFDKIEHSTFDGLDRRRLGHIEQMTHPFGLAIFGEHLFFTD 930
Query: 136 RNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDI--------VNQPPDENNPCFRT 187
L + + K +T+ IR+G++ + + +D+ NQP +P
Sbjct: 931 WRLGAIIRVRKADGGEMTV---IRSGIAYILHLKSYDVNIQTGSNACNQP---THP---- 980
Query: 188 GNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKC 227
NG C CF P C C G AS+ C
Sbjct: 981 -NGDCSHFCFPVP------NFQRVCGCPYGMRLASNHLTC 1013
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F + + LYWID Q I + +L+ + +I+++ + L +D + +YW+DA+LD
Sbjct: 3234 FDRVEKRLYWIDT-QRQVIERMFLNKTNKETIINHRLPAAESLAVDWVSRKLYWLDARLD 3292
Query: 100 LIQKISYNGGNRQIIRRN---------LPNPMGIAVH--KSDVYWVDRNLRTVYKASKLA 148
+ NGG+R+++ ++ NP G+A+H +YW D R +
Sbjct: 3293 GLFVSDLNGGHRRMLAQHCVDANNTFCFDNPRGLALHPQYGYLYWADWGHRAYIGRVGMD 3352
Query: 149 STNITL 154
TN ++
Sbjct: 3353 GTNKSV 3358
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 70 SIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVH-- 127
+++++GI + D T +Y+ D +I ++ +G NR +I R +P P I +
Sbjct: 2459 TVIASGIGTADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIAR-VPKPRAIVLDPC 2517
Query: 128 KSDVYWVD 135
+ +YW D
Sbjct: 2518 QGYLYWAD 2525
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN 117
I K +DG+ + +N + L D + ++YW D+ I + R+ + +
Sbjct: 765 IFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQY 824
Query: 118 LPNPMGIAVH 127
L NP + VH
Sbjct: 825 LNNPRSVVVH 834
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 175/361 (48%), Gaps = 50/361 (13%)
Query: 26 KLKTSFR----SANTTSPFS----PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS 77
KL ++R + T +P S P+ R LYW D GQ P I +S+LDGS+ IVS+GI+
Sbjct: 2233 KLDGTYRKILLTTKTETPSSIAVDPVSRYLYWADQGQKPTIQRSFLDGSRREVIVSSGIA 2292
Query: 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRN 137
P DL +D+ + +YW DAK+D I ++ GG +++R ++ + G+A+H ++YW D
Sbjct: 2293 EPTDLVVDVASKMIYWSDAKMDGIYRVRSTGGTPELVRSDIASAAGVALHGQNMYWTDNR 2352
Query: 138 LRTVYKA-SKLASTNITL-PTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGN---GGC 192
L +++A SK T++ L PT + L + D+A+F NQP ++PC T N C
Sbjct: 2353 LEKLFRATSKPNQTSLLLSPTTVAASLKDIGDVAVFSSNNQPR-ASSPCQITDNLRKSPC 2411
Query: 193 EQLCFSYP-VEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTL 251
QLCF+ P + P C CA G + C D Y++FS +I + ++P +
Sbjct: 2412 TQLCFATPGTQTP------TCSCARGVLKG---RTCEEPDTYIMFSDGDKIIDVAIEPDV 2462
Query: 252 TAV-----PFKTVSNLTNVVGVEFDYADDKILFTQIRP-WAKIAWIPTTNPSS------- 298
A PF +SNL + D ++ F P I+W N +
Sbjct: 2463 KASRPLKDPFPEISNLQT---FDVDVNLRRVYFVVESPVGVNISWFSMNNAENPRLVFGA 2519
Query: 299 ----ASSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASSNLTNVVGVEFDY 354
+ + ++ ++ D+ KI FT R K+ I T A +L+ + ++ Y
Sbjct: 2520 SKQPHAKEIRHISDMKLDWLTQKIYFTTGR-GGKVMAIDT-----AGEHLSTIASGDWTY 2573
Query: 355 A 355
A
Sbjct: 2574 A 2574
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 40/258 (15%)
Query: 26 KLKTSFRSANTTSP----FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRD 81
K +T N + P P +++W D+GQ P I ++ +DG+ IV I P
Sbjct: 1588 KQRTLLVHQNVSQPRGIAVDPRKGVMFWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNT 1647
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QIIRRN--LPNPMGIAVHKSDVYWVDRNL 138
+ +D T VY+ D+KLD I ++Y+G R Q++ + + +P +A+ + +Y+ DR L
Sbjct: 1648 IALDYTTDRVYFADSKLDFIDFVNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDRRL 1707
Query: 139 RTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFS 198
+ + K + T P T L +A+ ++ QP +NNPC C LC
Sbjct: 1708 QKLQVYPKYPN-GTTSEYPSHTFSKALGVVAVHPVL-QPVIKNNPC---STNPCSHLCLL 1762
Query: 199 YPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKT 258
NK + C C G + KKC +D+ A PF
Sbjct: 1763 ------NNKNTFTCKCPMGEKLDASGKKC--IDD--------------------AKPFLV 1794
Query: 259 VSNLTNVVGVEFDYADDK 276
+ TNV G+E + A +K
Sbjct: 1795 IIQKTNVFGIEMNSASEK 1812
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 57 RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRR 116
++ + +DG+ ++V+ + +D+ VYWVD K+D ++ I Y G +R+I+ +
Sbjct: 535 KLEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIVAQ 594
Query: 117 NL---PNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDI 173
+ P+P G+A+ +YW D V + K S L + + + I+ +
Sbjct: 595 GMNVVPHPFGLALFDQYLYWTDWTRLGVIQVEKFGSDTKLLWSNTENNVFPM-GISAYHP 653
Query: 174 VNQP-PDEN--------NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDP 224
+ QP P ++ NPC N CE +C + + YKC C G +
Sbjct: 654 MAQPGPGQSECLAMKIENPCT---NADCEGMCI-LSKDNGGFGVGYKCACPIGQKLV-NG 708
Query: 225 KKCTTMDEYLVFSTRTEIRAL 245
K+C +YL+FS+ +R +
Sbjct: 709 KRCIDSIDYLLFSSNKIVRGI 729
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 21/270 (7%)
Query: 47 LYWIDYGQYP---RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
++W+D G ++ ++ LDGS I SN ++ + ID VY+ +AK I
Sbjct: 1945 VFWLDRGGGAADAKVARAGLDGSNPLVIASNDLAELDHIAIDTTNTRVYFSEAKAGRISS 2004
Query: 104 ISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGL 162
++Y+G +R ++ P G+A + +++ D ++ A+ + T + +
Sbjct: 2005 VTYDGQDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDSIEVATINGDSQPPQWTHFKKDV 2064
Query: 163 SGLRDIAIFDIVNQP--PDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
L +I QP +PC NG C+ +C P+ F Q C CA G
Sbjct: 2065 ENLANIKAL----QPRASSSGHPC-HINNGNCDHICI--PLMFAQR----TCTCANGYVK 2113
Query: 221 ASDPKKCTTMDE-YLVFSTRTEIRALHLDPTLT-AVPFKTVSNLTNVVGVEFDYADDKIL 278
C DE +++ +T+T++ +D T + V + + L+ + GV++DY I
Sbjct: 2114 DG-QTSCKLFDESFVIVATKTKVIGYPIDETQSKGVAMEPIGGLS-ITGVDYDYESKTIY 2171
Query: 279 FTQIRPWAKIAWIPTTNPSSASSNLTNVVG 308
+ K T SS + + + +G
Sbjct: 2172 VAEASGINKGITAYTIGESSPRAVIRDSIG 2201
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTS-----IVSNGISMPRDLTIDMQTHDVYWVDA 96
P L++ ++ P IG+ LDGS + + + P + ID + ++W DA
Sbjct: 3442 PGKGYLFFTEWSLQPYIGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFWGDA 3501
Query: 97 KLDLIQKISYNG-GNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLP 155
L+ I + ++G G R I + + + V +YW D NLR V + K N T+
Sbjct: 3502 HLNEIGFMDFDGNGRRHIPAQRTSHVSSMVVFDDYLYWADWNLREVLRCDKWTGKNETI- 3560
Query: 156 TPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
++ + D+ I + QP NPC NGGC LC Y C C
Sbjct: 3561 --LKKTVQLPNDLRIVHPMRQPA-YPNPC-GDNNGGCSHLCL-----IGAGGNGYTCSCP 3611
Query: 216 TGTPSASDPKKC 227
SD K C
Sbjct: 3612 DQFVLLSDQKTC 3623
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P LL++ + + I + ++DG I + + P ++ ID + + W D L I
Sbjct: 856 PWKGLLFYAEAMRPAAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLKTI 915
Query: 102 QKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTG 161
+ ++G N + + P P+ I + +Y+V + ++ + K +
Sbjct: 916 SCMDFDGKNVVKLDIDNPIPVAITIMNEYIYYVHQRPYSIRRVHKKNGGGSKIVREFGAD 975
Query: 162 LSGLRDIAIFDIVNQP-PDEN--NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATG 217
+ + NQP PD++ +PC + C QLCF+ P E N+L KC C G
Sbjct: 976 ERSIFSLKACSHQNQPIPDDSREHPCRAS---QCTQLCFATPSESHPNELEAKCACRQG 1031
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 86/233 (36%), Gaps = 36/233 (15%)
Query: 42 PLPRLLYWIDYGQ-------YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWV 94
P LL+W D G PRI +S L G IVS IS+P + +D + +YW
Sbjct: 2579 PCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWA 2638
Query: 95 DAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDV-----YWVDRNLRTVYKASKLAS 149
D I+ Y+G NR++I G D+ Y D V++ K +
Sbjct: 2639 DVNRLNIEVADYDGQNRKVI------ASGYRAKSLDIWDRWLYMSDPLSNGVFRIDKESG 2692
Query: 150 TNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC-------FRTGNGGCEQLCFSYPVE 202
+ + R LR +F + N C +T NGGC+QLC +
Sbjct: 2693 SGLENVVSDRRIPGALR---VFASESDVRTRNQVCNALTSQLCKTDNGGCDQLCTVVADD 2749
Query: 203 FPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVP 255
+C C +P K + T+ +R + +P +P
Sbjct: 2750 IGLAASKVQCSCNDTYELVQEPGK--------DYPTQCVLRGSNSEPAKECLP 2794
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDM-QTHDVYWVDAKLD 99
+P + + D G + +I + +DG+ IV + + P + ID + + +YWVD K
Sbjct: 4339 APSAGRICYSDAGLHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYR 4398
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITL 154
+ ++ +G R + + P + V ++ +YW+ R +T+Y K +++
Sbjct: 4399 RVDAVNIDGSERTTVVHDRHIPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSV 4453
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 43 LPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
L +YW D + +I + +G+ T +++G+ + + +D ++YWVD+ L+ I+
Sbjct: 1522 LTDRIYWSDI-REKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWVDSSLNTIE 1580
Query: 103 KISYNGGNRQ--IIRRNLPNPMGIAV--HKSDVYWVD 135
+ ++ ++ +N+ P GIAV K ++W D
Sbjct: 1581 VANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVMFWTD 1617
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 14/238 (5%)
Query: 46 LLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105
+YW D+G+ ++ +S +DGS T +++N + P LT+D + + W DA + I+
Sbjct: 1180 FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVAD 1239
Query: 106 YNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
NG NR + + +P G+ + S +YW D R++++A K +N+ L +R+ L GL
Sbjct: 1240 LNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVIL---VRSNLPGL 1296
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
DI D QP N R NGGC LC P F C C TG D K
Sbjct: 1297 MDIQAVDRA-QPLGFNKCGSR--NGGCSHLCLPRPSGF-------SCACPTGIQLKGDGK 1346
Query: 226 KCTTMDE-YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
C E YL+FS+R IR + LD V L NV+ +++D D K+ +T +
Sbjct: 1347 TCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVYYTDV 1404
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ +YW D+G PRI S +DGS I + P LTID +YWVDAK
Sbjct: 561 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 620
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+I++ + +G +R+ +I + LP+P I V + +YW D + +++ A+K N + I
Sbjct: 621 VIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEI---I 677
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
R L DI QP +N R G NGGC LC P + +Y C C T
Sbjct: 678 RNKLHFPMDIHTLHPQRQPAGKN----RCGDNNGGCTHLC------LPSGQ-NYTCACPT 726
Query: 217 GTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDK 276
G + ++D++L+F+ R +IR + D + ++++ + V +++D DD
Sbjct: 727 GFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDH 786
Query: 277 ILFTQIR--PWAKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
+ +T + ++ W T ++L + G+ D+ +K+ +T
Sbjct: 787 VYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWT 833
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 14/242 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ +YW D+G P+I ++ +D S I+S+ ++ P L ID + +YW DA + I
Sbjct: 868 PMGGYMYWTDWGASPKIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTI 927
Query: 102 QKISYNGGNRQI-IRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ +G R++ I LP+P G+ ++ +YW D +++ A +L T + T ++
Sbjct: 928 EFAGLDGSKRKVLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRL--TGLDRET-LQE 984
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
L L DI +F Q P PC NGGC LC P + + C C TG
Sbjct: 985 NLENLMDIHVFH--RQRPPVTTPCA-VENGGCSHLCLRSP-----SPSGFSCTCPTGINL 1036
Query: 221 ASDPKKCT-TMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDKIL 278
D K C+ M+ +L+F+ R ++R + LD P V + N + + D + K+
Sbjct: 1037 LLDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVY 1096
Query: 279 FT 280
++
Sbjct: 1097 WS 1098
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L+W D+G +I ++ LDGS+ +++ + P LT+D T +YWVDA LD I
Sbjct: 1480 PRKGYLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLDRI 1539
Query: 102 QKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTG 161
+ NG RQ++ ++ +P + +YW D +++ + K + N +
Sbjct: 1540 ESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRN---KETVLAN 1596
Query: 162 LSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEF 203
+ GL DI + + Q N C NGGC LCF+ +F
Sbjct: 1597 VEGLMDIIV--VSPQRQTGTNACG-VNNGGCSHLCFARASDF 1635
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F L++W D RI ++ L+GS +VS G+ P L +D +YW D+
Sbjct: 475 FHHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 533
Query: 100 LIQKISYNGGNRQIIR-RNLPNPMGIAVH--KSDVYWVD 135
I+ + +G +R+++ ++L P IA+H + +YW D
Sbjct: 534 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD 572
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D + RI ++ LDGS+ I++ G+ L +D VYW D + I
Sbjct: 1090 PLEGKVYWSDSTLH-RISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRI 1148
Query: 102 QKISYNGGNRQI-IRRNLPNPMGIAVHKSD--VYWVD 135
+ + +G R++ + +NL +P I ++ +YW D
Sbjct: 1149 EVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTD 1185
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN 117
I ++ L+GS +++ +G+ L +D ++YW D + I+ +G R+++ N
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINN 1468
Query: 118 -LPNPMGIAV--HKSDVYWVD 135
L P IAV K ++W D
Sbjct: 1469 SLDEPRAIAVFPRKGYLFWTD 1489
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 91 VYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL 147
VY+ D LD+I++ NG N + +I L G+AV ++YW D T+ +AS+L
Sbjct: 1399 VYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTI-EASRL 1457
Query: 148 ASTNITLPTPIRTGLSGLRDIAIF 171
+ I L R IA+F
Sbjct: 1458 DGS--CRKVLINNSLDEPRAIAVF 1479
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 117/238 (49%), Gaps = 14/238 (5%)
Query: 46 LLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105
+YW D+G+ ++ +S +DGS +++N + P LT+D + + W DA + I+
Sbjct: 1180 FMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAAD 1239
Query: 106 YNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
NG NR + + +P G+ + S +YW D R++++A K +N+ L +R+ L GL
Sbjct: 1240 LNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVIL---VRSNLPGL 1296
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
D+ D QP N R NGGC LC P F C C TG D K
Sbjct: 1297 MDMQAVDRA-QPLGFNKCGSR--NGGCSHLCLPRPSGF-------SCACPTGIQLKGDGK 1346
Query: 226 KCTTMDE-YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
C E YL+FS+R IR + LD + V L NV+ +++D D K+ +T +
Sbjct: 1347 TCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVYYTDV 1404
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ +YW D+G PRI S +DGS I + P LTID +YWVDAK
Sbjct: 561 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 620
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+I++ + +G +R+ +I + LP+P I V + +YW D + +++ A+K N + I
Sbjct: 621 VIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEI---I 677
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
R L DI QP +N R G NGGC LC P + +Y C C T
Sbjct: 678 RNKLHFPMDIHTLHPQRQPAGKN----RCGDNNGGCTHLC------LPSGQ-NYTCACPT 726
Query: 217 GTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDK 276
G S ++D++L+F+ R +IR + D + ++++ + V +++D DD
Sbjct: 727 GFRKISSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDH 786
Query: 277 ILFTQIR--PWAKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
+ +T + ++ W T ++L + G+ D+ +K+ +T
Sbjct: 787 VYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWT 833
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ +YW D+G P+I ++ +D S I+S+ ++ P L ID + +YW DA + I
Sbjct: 868 PMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTI 927
Query: 102 QKISYNGGNRQI-IRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ +G R++ I LP+P G+ ++ +YW D +++ A +L T + T ++
Sbjct: 928 EFAGLDGSKRKVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRL--TGLDRET-LQE 984
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
L L DI +F + P + PC NGGC LC P N + C C TG
Sbjct: 985 NLENLMDIHVFH--RRRPPVSTPCAME-NGGCSHLCLRSP-----NPSGFSCTCPTGINL 1036
Query: 221 ASDPKKCT-TMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDKIL 278
SD K C+ M+ +L+F+ R +IR + LD P V + N + + D + K+
Sbjct: 1037 LSDGKTCSPGMNSFLIFARRIDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVY 1096
Query: 279 FT 280
++
Sbjct: 1097 WS 1098
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L+W D+G +I ++ LDGS+ +++ + P LT+D T +YWVDA LD I
Sbjct: 1480 PRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRI 1539
Query: 102 QKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTG 161
+ NG RQ++ ++ +P + +YW D +++ + K + N +
Sbjct: 1540 ESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRN---KETVLAN 1596
Query: 162 LSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEF 203
+ GL DI + + Q N C NGGC LCF+ +F
Sbjct: 1597 VEGLMDIIV--VSPQRQTGTNACG-VNNGGCTHLCFARASDF 1635
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F L++W D RI ++ L+GS +VS G+ P L +D +YW D+
Sbjct: 475 FHHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 533
Query: 100 LIQKISYNGGNRQIIR-RNLPNPMGIAVH--KSDVYWVD 135
I+ + +G +R+++ +NL P IA+H + +YW D
Sbjct: 534 RIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTD 572
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P +YW D + RI ++ LDGS+ I++ G+ L +D VYW D + I
Sbjct: 1090 PQEGKVYWSDSTLH-RISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRI 1148
Query: 102 QKISYNGGNRQI-IRRNLPNPMGIAVHKSD--VYWVD 135
+ + +G R++ + +NL +P I ++ +YW D
Sbjct: 1149 EVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTD 1185
Score = 39.3 bits (90), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN 117
I ++ L+GS +++ G+ L +D ++YW D + I+ +G R+++ N
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINN 1468
Query: 118 -LPNPMGIAV--HKSDVYWVD 135
L P IAV K ++W D
Sbjct: 1469 SLDEPRAIAVFPRKGYLFWTD 1489
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 91 VYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL 147
VY+ D LD+I++ NG N + +I R L G+AV ++YW D T+ +AS+L
Sbjct: 1399 VYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTI-EASRL 1457
Query: 148 ASTNITLPTPIRTGLSGLRDIAIF 171
+ I L R IA+F
Sbjct: 1458 DGS--CRKVLINNSLDEPRAIAVF 1479
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 46 LLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105
+YW D+G+ ++ +S +DGS T +++N + P LT+D + + W DA + I+
Sbjct: 1180 FMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVAD 1239
Query: 106 YNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
NG NR + + +P G+ + S +YW D R++++A K +N+ L +R+ L GL
Sbjct: 1240 LNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVIL---VRSNLPGL 1296
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
DI D QP N R NGGC LC P F C C TG D K
Sbjct: 1297 MDIQAVDRA-QPLGFNKCGSR--NGGCSHLCLPRPSGF-------SCACPTGIQLKGDRK 1346
Query: 226 KCTTMDE-YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
C E YL+FS+R IR + LD V L NV+ +++D K+ +T +
Sbjct: 1347 TCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVHGKVYYTDV 1404
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ +YW D+G PRI S +DGS I + P LTID +YWVDAK
Sbjct: 561 LHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 620
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+I++ + +G +R+ +I + LP+P I V + +YW D + +++ A+K N + I
Sbjct: 621 VIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEI---I 677
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
R L DI QP +N R G NGGC LC P + +Y C C T
Sbjct: 678 RNKLHFPMDIHTLHPQRQPAGKN----RCGDNNGGCTHLC------LPSGQ-NYTCACPT 726
Query: 217 GTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDK 276
G + ++D++L+F+ R +IR + D + ++++ + V +++D DD
Sbjct: 727 GFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDH 786
Query: 277 ILFTQIR--PWAKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
+ +T + ++ W T ++L + G+ D+ +K+ +T
Sbjct: 787 VYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWT 833
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 14/242 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ +YW D+G P+I ++ +D S I+S+ ++ P L ID + +YW DA + I
Sbjct: 868 PMGGYMYWTDWGASPKIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTI 927
Query: 102 QKISYNGGNRQI-IRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ +G R++ I LP+P G+ ++ +YW D +++ A +L T + T ++
Sbjct: 928 EFAGLDGSKRKVLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRL--TGLDRET-LQE 984
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
L L DI +F Q P C NGGC LC P N + C C TG
Sbjct: 985 NLENLMDIHVFH--RQRPPVTTLCA-VENGGCSHLCLRSP-----NPSGFSCTCPTGINL 1036
Query: 221 ASDPKKCT-TMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDKIL 278
D K C+ M+ +L+F+ R ++R + LD P V + N + + D + K+
Sbjct: 1037 LRDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVY 1096
Query: 279 FT 280
++
Sbjct: 1097 WS 1098
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L+W D+G +I ++ LDGS+ +++ + P LT+D T +YWVDA LD I
Sbjct: 1480 PRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRI 1539
Query: 102 QKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTG 161
+ NG RQ++ ++ +P + +YW D +++ + K + N +
Sbjct: 1540 ESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRN---KETVLAN 1596
Query: 162 LSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEF 203
+ GL DI + + Q N C NGGC LCF+ +F
Sbjct: 1597 VEGLMDIIV--VSPQRQTGTNACG-VNNGGCTHLCFARASDF 1635
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F L++W D RI ++ L+GS +VS G+ P L +D +YW D+
Sbjct: 475 FHHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 533
Query: 100 LIQKISYNGGNRQIIR-RNLPNPMGIAVH--KSDVYWVD 135
I+ + +G +R+++ ++L P IA+H + +YW D
Sbjct: 534 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD 572
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D + RI ++ LDGS+ I++ G+ L +D VYW D + I
Sbjct: 1090 PLEGKVYWSDSTLH-RISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRI 1148
Query: 102 QKISYNGGNRQI-IRRNLPNPMGIAVHKSD--VYWVD 135
+ + +G R++ + +NL +P I ++ +YW D
Sbjct: 1149 EVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTD 1185
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D I ++ DG+ +V + P L ID T+ +YW DA D I+ +
Sbjct: 787 VYWTDV-STDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANT 845
Query: 107 NGGNRQI-IRRNLPNPMGIAVH--KSDVYWVD 135
+G R + I NL P I V +YW D
Sbjct: 846 DGSMRTVLIWENLDRPRDIVVEPMGGYMYWTD 877
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN 117
I ++ L+GS +++ +G+ L +D ++YW D + I+ +G R+++ N
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINN 1468
Query: 118 -LPNPMGIAV--HKSDVYWVD 135
L P IAV K ++W D
Sbjct: 1469 SLDEPRAIAVFPRKGYLFWTD 1489
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 91 VYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL 147
VY+ D LD+I++ NG N + +I L G+AV ++YW D T+ +AS+L
Sbjct: 1399 VYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTI-EASRL 1457
Query: 148 ASTNITLPTPIRTGLSGLRDIAIF 171
+ I L R IA+F
Sbjct: 1458 DGS--CRKVLINNSLDEPRAIAVF 1479
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 14/244 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW D+G+ P+I ++ +DGS I++ I P LT+D Q +YW DAKL+
Sbjct: 145 LDPSSGFMYWTDWGEVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYWADAKLN 204
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I K + +G NRQ +++ +LP+P + + + +YW D N ++ +K + I
Sbjct: 205 FIHKSNLDGTNRQAVVKGSLPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGL---REI 261
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
+ + DI F Q P+ NPC NGGC LC PV K Y+C C TG
Sbjct: 262 HSNIFSPMDIHAFSQQRQ-PNATNPC-GIDNGGCSHLCLMSPV-----KPFYQCACPTGV 314
Query: 219 PSASDPKKCT-TMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDK 276
+ K C E L+ + RT++R + LD P T + + + ++ + + +++D +
Sbjct: 315 KLMENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQ-LEDIRHAIAIDYDPVEGY 373
Query: 277 ILFT 280
I +T
Sbjct: 374 IYWT 377
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 26/277 (9%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ +YW D+G+ P+I ++ LDGS +V+ + P L +D +YW DAK D
Sbjct: 453 LDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTD 512
Query: 100 LIQKISYNG-GNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I+ ++ +G G R ++ +P+ G + VYW D R++ + K ++ + +
Sbjct: 513 KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQL 572
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L GL+ ++ ++ +NPC NGGC LC P +C C G
Sbjct: 573 -PDLMGLKATSVHRVIG-----SNPCAED-NGGCSHLCLYRPQGL-------RCACPIGF 618
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDP--TLTAVPFKTVSNLTNVVGVEFDYADDK 276
D K C + +L+FS R +IR + L+ A+P V + ++FD D++
Sbjct: 619 ELIGDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEAS---ALDFDVTDNR 675
Query: 277 ILFTQIRPWAKIAWIPTTNPSSASSNLTNVVGVEFDY 313
I W I+ + S L +VV DY
Sbjct: 676 IY------WTDISLKTISRAFMNGSALEHVVEFGLDY 706
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 13/244 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW ++G P+I ++ +DGS+ T++V N + LTID +YW D +
Sbjct: 755 LDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTN 813
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
LI+ G NR++I +LP+P G+ ++ +YW D + R++ +A+K + N T+ I+
Sbjct: 814 LIESSDMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTI---IQ 870
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTP 219
L + DI +F Q N C + NG C LC + PV + C C
Sbjct: 871 GHLDYVMDILVFHSSRQAG--WNEC-ASSNGHCSHLCLAVPVG------GFVCGCPAHYS 921
Query: 220 SASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILF 279
+D + C+ +L+FS ++ I + +D + + +L NV +++D D ++ +
Sbjct: 922 LNADNRTCSAPSTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYW 981
Query: 280 TQIR 283
R
Sbjct: 982 IDSR 985
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 56 PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR 115
P+I ++ LDG++ + +G+S P L +D + ++W D+ L I+ +G NR ++
Sbjct: 1081 PKIERAALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLSGANRIVLE 1140
Query: 116 -RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIV 174
N+ P+G+ V ++ +YW+D+ + + K+ T T ++ ++ L DI +
Sbjct: 1141 DSNILQPVGLTVFENWLYWIDKQQQMI---EKIDMTGREGRTKVQARIAQLSDIHAVKEL 1197
Query: 175 NQPPDENNPCFRTGNGGCEQLCF-----SYPVEFPQNKLHYKCDCATGTPSASDPKK--C 227
N +PC + NGGC +C + P + + + + + G P P++ C
Sbjct: 1198 NLQEYRQHPCAQD-NGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPPTCSPQQFTC 1256
Query: 228 TTMD 231
T D
Sbjct: 1257 FTGD 1260
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
+ P+ +YW D + I +S++DGS +V+ I+ P + +D ++YW D D
Sbjct: 367 YDPVEGYIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTD 425
Query: 100 LIQKISYNGGNRQI-IRRNLPNPMGIAVHK--SDVYWVD 135
I+ NG R+I I +L P I + +YW D
Sbjct: 426 RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTD 464
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D I +++++GS +V G+ P + +D ++YW D + I+
Sbjct: 676 IYWTDI-SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKL 734
Query: 107 NGGNRQIIR-RNLPNPMGIAVHKSD--VYWVD 135
+G +RQ++ ++L +P +A+ ++ +YW +
Sbjct: 735 DGQHRQVLVWKDLDSPRALALDPAEGFMYWTE 766
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS------MPRDLTIDMQTHDVYW 93
+ PL + LYWID Q I K++ DG + ++V+N ++ P DL+ID+ + +YW
Sbjct: 972 YDPLDKQLYWIDSRQ-NSIRKAHEDGGQGFNVVANSVANQNLEIQPYDLSIDIYSRYIYW 1030
Query: 94 VDAKLDLIQKISYNGGNRQIIRRNLPN-PMGIAVHKSDVYWVDRNLR 139
++I +G + ++ + + P I V+ Y NL+
Sbjct: 1031 TCEATNVIDVTRLDGRSVGVVLKGEQDRPRAIVVNPEKGYMYFTNLQ 1077
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRNLPNPMGIAVH--KSDV 131
G+ L D+ + +YW D L I + NG ++ L P G+AV ++
Sbjct: 660 GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL 719
Query: 132 YWVDRNLRTVYKASKL 147
YW D + + SKL
Sbjct: 720 YWADTGTNRI-EVSKL 734
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 124/244 (50%), Gaps = 14/244 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW D+G+ P+I ++ +DGS I+++ I P LT+D + +YW DAKL+
Sbjct: 145 LDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLN 204
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I K + +G NRQ +++ +LP+P + + + +YW D + ++ +K + I
Sbjct: 205 FIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGL---REI 261
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
+ + DI F Q P+ NPC NGGC LC PV K Y+C C TG
Sbjct: 262 HSDIFSPMDIHAFSQQRQ-PNATNPC-GIDNGGCSHLCLMSPV-----KPFYQCACPTGV 314
Query: 219 PSASDPKKCT-TMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDK 276
+ K C E L+ + RT++R + LD P T + + + ++ + + +++D +
Sbjct: 315 KLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQ-LEDIRHAIAIDYDPVEGY 373
Query: 277 ILFT 280
I +T
Sbjct: 374 IYWT 377
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 26/279 (9%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ +YW D+G+ P+I ++ LDGS +V+ + P L +D +YW DAK D
Sbjct: 453 LDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD 512
Query: 100 LIQKISYNG-GNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I+ ++ +G G R ++ +P+ G + VYW D R++ + K ++ + +
Sbjct: 513 KIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQL 572
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L GL+ + ++ +NPC NGGC LC P +C C G
Sbjct: 573 -PDLMGLKATNVHRVIG-----SNPCAEE-NGGCSHLCLYRPQGL-------RCACPIGF 618
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDP--TLTAVPFKTVSNLTNVVGVEFDYADDK 276
SD K C + +L+FS R +IR + L+ A+P V + ++FD D++
Sbjct: 619 ELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEAS---ALDFDVTDNR 675
Query: 277 ILFTQIRPWAKIAWIPTTNPSSASSNLTNVVGVEFDYAD 315
I W I+ + S L +VV DY +
Sbjct: 676 IY------WTDISLKTISRAFMNGSALEHVVEFGLDYPE 708
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 13/244 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW ++G P+I ++ +DGS+ T++V N + LTID +YW D +
Sbjct: 755 LDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTN 813
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
LI+ + G NR++I +LP+P G+ ++ +YW D + R++ +A+K + N T+ I+
Sbjct: 814 LIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTI---IQ 870
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTP 219
L + DI +F Q N C + NG C LC + PV + C C
Sbjct: 871 GHLDYVMDILVFHSSRQ--SGWNEC-ASSNGHCSHLCLAVPVG------GFVCGCPAHYS 921
Query: 220 SASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILF 279
+D + C+ +L+FS ++ I + +D + + +L NV +++D D ++ +
Sbjct: 922 LNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYW 981
Query: 280 TQIR 283
R
Sbjct: 982 IDSR 985
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 56 PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR 115
P+I ++ LDG++ + +G+S P L +D + ++W D+ L I+ +G NR ++
Sbjct: 1081 PKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLE 1140
Query: 116 -RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIV 174
N+ P+G+ V ++ +YW+D+ + + K+ T T ++ ++ L DI +
Sbjct: 1141 DSNILQPVGLTVFENWLYWIDKQQQMI---EKIDMTGREGRTKVQARIAQLSDIHAVKEL 1197
Query: 175 NQPPDENNPCFRTGNGGCEQLCF-----SYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229
N +PC + NGGC +C + P + + + + + G P P++ T
Sbjct: 1198 NLQEYRQHPCAQD-NGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPPTCSPQQFTC 1256
Query: 230 M 230
Sbjct: 1257 F 1257
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
+ P+ +YW D + I +S++DGS +V+ I+ P + +D ++YW D D
Sbjct: 367 YDPVEGYIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTD 425
Query: 100 LIQKISYNGGNRQI-IRRNLPNPMGIAVHK--SDVYWVD 135
I+ NG R+I I +L P I + +YW D
Sbjct: 426 RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTD 464
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D I +++++GS +V G+ P + +D ++YW D + I+
Sbjct: 676 IYWTDI-SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKL 734
Query: 107 NGGNRQIIR-RNLPNPMGIAVHKSD--VYWVD 135
+G +RQ++ ++L +P +A+ ++ +YW +
Sbjct: 735 DGQHRQVLVWKDLDSPRALALDPAEGFMYWTE 766
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS------MPRDLTIDMQTHDVYW 93
+ PL + LYWID Q I K+ DGS+ ++V + + P DL+ID+ + +YW
Sbjct: 972 YDPLDKQLYWIDSRQ-NMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYW 1030
Query: 94 VDAKLDLIQKISYNGGNRQIIRRNLPN-PMGIAVHKSDVYWVDRNLR 139
++I +G + ++ + + P + V+ Y NL+
Sbjct: 1031 TCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQ 1077
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRNLPNPMGIAVH--KSDV 131
G+ L D+ + +YW D L I + NG ++ L P G+AV ++
Sbjct: 660 GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL 719
Query: 132 YWVDRNLRTVYKASKL 147
YW D + + SKL
Sbjct: 720 YWADTGTNRI-EVSKL 734
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 29/257 (11%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L+W ++GQYPRI +S LDG++ +V+ IS P +++D Q +YW DA+ D I
Sbjct: 2017 PEKGYLFWTEWGQYPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKI 2076
Query: 102 QKISYNGG-NRQII-RRNLPNPMGIAVHKSDVYWVDRNLR--TVYKASKLASTNITLPTP 157
++I G NR+++ N + ++V + +YW DR ++ + SK N T P
Sbjct: 2077 ERIDLETGENREVVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSK---DNATDSVP 2133
Query: 158 IRTGLS-GLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
+RTG+ L+DI +F+ Q N C NGGC+QLC + + C CA
Sbjct: 2134 LRTGIGVQLKDIKVFNRDRQ--KGTNVC-AVANGGCQQLCLY------RGRGQRACACAH 2184
Query: 217 GTPSASDPKKCTTMDEYLVFSTRTEIRALHL--DPTLTA--VPFKTVSNLTNVVGVEFDY 272
G A D C YL++S RT ++++HL + L A PF+ ++ NV+ + FDY
Sbjct: 2185 GM-LAEDGASCREYAGYLLYSERTILKSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDY 2243
Query: 273 -------ADDKILFTQI 282
++I F+ I
Sbjct: 2244 RAGTSPGTPNRIFFSDI 2260
Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
LYW D+G + IG+ +DGS + IV I+ P LT+D T +YW DA+ D I+ S
Sbjct: 3159 LYWTDWGDHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASL 3218
Query: 107 NGGNRQII-RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
+G NR ++ +++P+ + + + VYW D +++ +A K TN TL + + L
Sbjct: 3219 DGSNRHVVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGTNKTL---LISTLHRP 3275
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
D+ +F + QP N+PC + NGGC LC P +KC C T SD +
Sbjct: 3276 MDLHVFHALRQPDVPNHPC-KVNNGGCSNLCLLSP------GGGHKCACPTNFYLGSDGR 3328
Query: 226 KCTT 229
C +
Sbjct: 3329 TCVS 3332
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 24/309 (7%)
Query: 27 LKTSFRSANTTSP----FSPLPRLLYWIDY-GQYPRIGKSYLDGSKWTSIVSNGIS--MP 79
L+T+ + + P P +L+W D+ PRI + + G+ ++ S P
Sbjct: 1377 LRTTLLAGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAGRRTVHRETGSGGWP 1436
Query: 80 RDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRRN--LPNPMGIAVHKSDVYWVDR 136
LT+D + W+DA+ D I Y+G G+ +++R + L +P + ++ +VYW D
Sbjct: 1437 NGLTVDYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDW 1496
Query: 137 NLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC-FRTGNGGCEQL 195
T+ KA+K N+T+ RT D+ ++ QP NPC G G C L
Sbjct: 1497 RTNTLAKANKWTGHNVTVVQ--RTNTQPF-DLQVYHPSRQPMAP-NPCEANGGQGPCSHL 1552
Query: 196 CFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAV 254
C + + + C C D C ++L+++ + EIR + LD P +
Sbjct: 1553 CL---INYNRT---VSCACPHLMKLHKDNTTCYEFKKFLLYARQMEIRGVDLDAPYYNYI 1606
Query: 255 PFKTVSNLTNVVGVEFDYADDKILFTQIRPWA-KIAWIPTTNPSS-ASSNLTNVVGVEFD 312
TV ++ NV +++D + ++ ++ +R A K A+I T + S++L N G+ D
Sbjct: 1607 ISFTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHGLAVD 1666
Query: 313 YADDKILFT 321
+ + +T
Sbjct: 1667 WVSRNLFWT 1675
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 20/197 (10%)
Query: 46 LLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104
L++W ++ Q+P I ++ L G+ +++ I P L ID + +Y+ DA LD I++
Sbjct: 2345 LMFWTNWNEQHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERC 2404
Query: 105 SYNGGNRQIIRRNLP-NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLS 163
Y+G +R +I ++ P +P G+AV+ ++W D R V +A+K +N+ L +R +
Sbjct: 2405 EYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKHVGSNMKL---LRVDIP 2461
Query: 164 GLRDIAIFDIVNQPPD-ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222
+ + I + N E +PC R NGGC+ LC ++ H C C G
Sbjct: 2462 Q-QPMGIIAVANDTNSCELSPC-RINNGGCQDLCLL------THQGHVNCSCRGGRILQD 2513
Query: 223 D------PKKCTTMDEY 233
D C DE+
Sbjct: 2514 DLTCRAVNSSCRAQDEF 2530
Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G +P+I + +DG+ ++V + I P L +D +YW DAKL +I
Sbjct: 4010 PLRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVI 4069
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I NG + + +R L +P I V + +Y V V+K K + + +
Sbjct: 4070 GSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPL---VNL 4126
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYP 200
GLS D+ ++ Q P+ NPC R CE LC P
Sbjct: 4127 TGGLSHASDVVLYHQHKQ-PEVTNPCDRK---KCEWLCLLSP 4164
Score = 75.5 bits (184), Expect = 7e-13, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL LYW D I + +DGS T + S G P L ID +YW+ + I
Sbjct: 1711 PLRGKLYWTDGDN---ISMANMDGSNRTLLFS-GQKGPVGLAIDFPESKLYWISSGNHTI 1766
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ + +G ++I R L +A+ ++W D+ + SK + + +
Sbjct: 1767 NRCNLDGSGLEVIDAMRSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVV---L 1823
Query: 159 RTGLSGLRDIAIFDIVNQPPDE-NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATG 217
R + + + ++D Q + NPC NG C QLC P ++ C C G
Sbjct: 1824 RNSTTLVMHMKVYDESIQLDHKGTNPC-SVNNGDCSQLCL------PTSETTRSCMCTAG 1876
Query: 218 TPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKI 277
S + C + +L++S IR + LDP + VS + VG++F +D I
Sbjct: 1877 YSLRSGQQACEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTI 1936
Query: 278 LFTQI 282
+ +
Sbjct: 1937 YWVDM 1941
Score = 75.1 bits (183), Expect = 8e-13, Method: Composition-based stats.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 26/301 (8%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+++ DYGQ P++ + +DG T +V + I P +T+D+ + VYW DA LD I+ + Y
Sbjct: 337 VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDY 396
Query: 107 NGGNRQIIRRN--LPNPMGIAVHKSDVYWVD------RNLRTVYKASKLASTNITLPTPI 158
G RQ I + + + G+ V ++ +Y + + +V + ++ ST + T +
Sbjct: 397 EGKGRQTIIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRV 456
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRT---GNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
G + + I+ QP ++ C GGC +C + C C
Sbjct: 457 DKGGA----LHIYHQRRQPRVRSHACENDQYGKPGGCSDICL-----LANSHKARTCRCR 507
Query: 216 TGTPSASDPKKCTTMDE--YLVFSTRTE--IRALHLDPTLTAVPFKTVSNLTNVVGVEFD 271
+G SD K C + +LV+ IR + + + + NL N ++F
Sbjct: 508 SGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFH 567
Query: 272 YADDKILFTQIRPW--AKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFTQIRPWAKI 329
I F + + T + + NV GV D+ D + +T P I
Sbjct: 568 AETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGVAVDWMGDNLYWTDDGPKKTI 627
Query: 330 A 330
+
Sbjct: 628 S 628
Score = 75.1 bits (183), Expect = 8e-13, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 21 LKKKKKLKTSFRSANTTSP----FSPLPRLLYWIDYGQYP------RIGKSYLDGS-KWT 69
L+K + + + T P PL +YW D+ + P R+ ++++DGS +
Sbjct: 632 LEKAAQTRKTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDI 691
Query: 70 SIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRR--NLPNPMGIAVH 127
+ S + P L++D+ +YWVDA D I+ I NG +R+I+ L + G+ H
Sbjct: 692 FVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYEGPELNHAFGLCHH 751
Query: 128 KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT 187
+ ++W + +VY+ + T +R+ + +I ++D Q N C R
Sbjct: 752 GNYLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYD-AQQQQVGTNKC-RV 809
Query: 188 GNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYL 234
NGGC LC + P +C CA +D C Y+
Sbjct: 810 NNGGCSSLCLATPGS-------RQCACAEDQVLDADGVTCLANPSYV 849
Score = 48.9 bits (115), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW+D G I ++ D + +V+NGI + +D ++YW D D+I+
Sbjct: 1936 IYWVDMG-LSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARL 1994
Query: 107 NGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
NG R +I + L P I VH K ++W +
Sbjct: 1995 NGSFRYVVISQGLDKPRAITVHPEKGYLFWTE 2026
Score = 44.3 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 10 LIWAIRLALRLLKKKKK----LKTSFRSANTTSPFSPLPRLLYWIDYG-QYPRIGKSYLD 64
LI+A R LR L LK +A F +++YW D Q I + +L+
Sbjct: 3031 LIFANRYYLRKLNLDGSNYTLLKQGLNNA-VALDFDYREQMIYWTDVTTQGSMIRRMHLN 3089
Query: 65 GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN---LPNP 121
GS + G+S P L +D ++YW D D I+ NG R ++ + P
Sbjct: 3090 GSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRA 3149
Query: 122 MGIAVHKSDVYWVD 135
+ + V +YW D
Sbjct: 3150 LVVDVQNGYLYWTD 3163
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 210 YKCDCATG-TPSASDPKKC---TTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNV 265
YKC C G P DP C T + +L+F+ R +R L+LD + + L N
Sbjct: 3003 YKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLDGSNYTL---LKQGLNNA 3059
Query: 266 VGVEFDYADDKILFTQI 282
V ++FDY + I +T +
Sbjct: 3060 VALDFDYREQMIYWTDV 3076
Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTS---IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
LYW D + LD TS ++ G++ P L +D ++YWV++ LD I+
Sbjct: 1311 LYWTDVVEDKIYRGKLLDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEV 1370
Query: 104 ISYNGGNR-QIIRRNLPNPMGIAVHKSD--VYWVD 135
+G R ++ ++ +P IA+ D ++W D
Sbjct: 1371 AKLDGTLRTTLLAGDIEHPRAIALDPRDGILFWTD 1405
Score = 42.0 bits (97), Expect = 0.008, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 74 NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSD 130
+G+ MPR + ID +VYW D+ D+I+ G NR+ +I + P I V +
Sbjct: 3955 SGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLRGT 4014
Query: 131 VYWVD 135
+YW D
Sbjct: 4015 MYWSD 4019
Score = 39.7 bits (91), Expect = 0.042, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMD---EYLVFSTRTEIRALHLD 248
C Q C QNK KC C G D + C ++D +++FS R EIR + L
Sbjct: 1233 CSQKC-------DQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNRHEIRRIDLH 1285
Query: 249 PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
+V V L N + ++F + + +T +
Sbjct: 1286 KGDYSV---LVPGLRNTIALDFHLSQSALYWTDV 1316
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 136/267 (50%), Gaps = 36/267 (13%)
Query: 26 KLKTSFR----SANTTSPFS----PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS 77
+L SFR S P S P LL+W ++GQ P IGK+ LDGS+ +VS GI+
Sbjct: 1981 RLNGSFRYVIISQGLDQPRSIAVHPEKGLLFWTEWGQMPCIGKARLDGSEKVVLVSMGIA 2040
Query: 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISY-NGGNRQIIRRNLPNPM-GIAVHKSDVYWVD 135
P ++ID + + +YW DA+ D I++I GGNR+++ M +AV + +YW D
Sbjct: 2041 WPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLSGSNVDMFSVAVFGAYIYWSD 2100
Query: 136 R-----NLRTVYKASKLASTNITLPTPIRTGLS-GLRDIAIFDIVNQPPDENNPCFRTGN 189
R ++R +K A+ IT+ RTGL L+++ IF+ V + N C R N
Sbjct: 2101 RAHANGSVRRGHKND--ATETITM----RTGLGVNLKEVKIFNRVRE--KGTNVCARD-N 2151
Query: 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHL-D 248
GGC+QLC + C CA G A D C + YL++S RT ++++HL D
Sbjct: 2152 GGCKQLCLY------RGNSRRTCACAHGY-LAEDGVTCLRHEGYLLYSGRTILKSIHLSD 2204
Query: 249 PTLTAVPFKTVSN---LTNVVGVEFDY 272
T P + N NV+ + FDY
Sbjct: 2205 ETNLNSPIRPYENPRYFKNVIALAFDY 2231
Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 44 PR--LLYWIDY-GQYPRIGKSYLDGSKWTSIVSNGIS--MPRDLTIDMQTHDVYWVDAKL 98
PR +L+W D+ +PRI + + G+ +I + + P LT+D + W DA+
Sbjct: 1387 PRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARS 1446
Query: 99 DLIQKISYNGGNR-QIIRRN--LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLP 155
D I Y+G N +IIR + L +P ++++ S+VYW D T+ KA+K N+++
Sbjct: 1447 DAIYSALYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLSKANKWTGQNVSV- 1505
Query: 156 TPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
I+ + D+ I+ QP N G G C +C + C C
Sbjct: 1506 --IQKTSAQPFDLQIYHPSRQPQAPNPCAANDGKGPCSHMCLI------NHNRSAACACP 1557
Query: 216 TGTPSASDPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYAD 274
+SD K C M ++L+++ R+EIR + +D P + TV ++ +V ++FD ++
Sbjct: 1558 HLMKLSSDKKTCYEMKKFLLYARRSEIRGVDIDNPYFNFITAFTVPDIDDVTVIDFDASE 1617
Query: 275 DKILFTQIRPWA-KIAWIPTTNPSSA-SSNLTNVVGVEFDY 313
+++ +T I+ K A+I T + S ++ ++ G+ D+
Sbjct: 1618 ERLYWTDIKTQTIKRAFINGTGLETVISRDIQSIRGLAVDW 1658
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 19/244 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ LYW D I + +DGS + I+ P L+ID + +YW+ + I
Sbjct: 1702 PVRGKLYWTDGNT---INMANMDGSN-SKILFQNQKEPVGLSIDYVENKLYWISSGNGTI 1757
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ + +GGN ++I + L + + ++W D+NL + SK N PT +
Sbjct: 1758 NRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRN---PTIL 1814
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
R SG+ + ++D + +N C + NGGC QLC P ++ C C G
Sbjct: 1815 RNKTSGVVHMKVYD--KEAQQGSNSC-QLNNGGCSQLCL------PTSETTRTCMCTVGY 1865
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKIL 278
+ C ++ +L++S IR + L+P+ +S + VG++F +D I
Sbjct: 1866 YLQKNRMSCQGIESFLMYSVHEGIRGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIY 1925
Query: 279 FTQI 282
+T +
Sbjct: 1926 WTDM 1929
Score = 85.9 bits (211), Expect = 5e-16, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 19/192 (9%)
Query: 21 LKKKKKLKTSFRSANTTSP----FSPLPRLLYWIDYGQ------YPRIGKSYLDGSKWTS 70
L+K + + + + P P+ +YW D+ + RI K+++DG
Sbjct: 629 LEKASQSRKTLLEGEMSHPRGIVVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQI 688
Query: 71 IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR--RNLPNPMGIAVHK 128
V++ + P LT+D T+ +YW DA D I+K+ NG +R+I+ R L +P G++ H
Sbjct: 689 FVTSKMLWPNGLTLDFHTNTLYWCDAYYDHIEKVFLNGTHRKIVYSGRELNHPFGLSHHG 748
Query: 129 SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTG 188
+ V+W D ++++ L ++ +TL R L GL+ I+D Q D N C R
Sbjct: 749 NYVFWTDYMNGSIFQLD-LITSEVTLLRHERPPLFGLQ---IYDPRKQQGD--NMC-RVN 801
Query: 189 NGGCEQLCFSYP 200
NGGC LC + P
Sbjct: 802 NGGCSTLCLAIP 813
Score = 82.4 bits (202), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P LYWID +YP IG+ +DG+ + ++ IS P LTID +YW D +
Sbjct: 3137 LDPQAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--N 3194
Query: 100 LIQKISYNGGNR-QIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I+ + +G +R ++ +++P + + + + +YW D +++ +A K + + +
Sbjct: 3195 HIEFSNMDGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGAD---RLSL 3251
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
+ DI ++ QP + C NGGC LC P K H C C T
Sbjct: 3252 IYSWHAITDIQVYHSYRQPDVSKHLCM-INNGGCSHLCLLAP-----GKTH-TCACPTNF 3304
Query: 219 PSASDPKKCTT 229
A+D + C +
Sbjct: 3305 YLAADNRTCLS 3315
Score = 72.4 bits (176), Expect = 6e-12, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 118/294 (40%), Gaps = 26/294 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ L++ DYG ++ + +DG T I+ + P L +D+ VYWVD LD +
Sbjct: 335 PIAGKLFFTDYGNVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYV 394
Query: 102 QKISYNGGNRQII--RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+ Y G NR + R + + GI V + +Y + + + + ++ T+I I
Sbjct: 395 GVVDYQGKNRHTVIQGRQVRHLYGITVFEDYLYATNSDNYNIVRINRFNGTDIHSLIKIE 454
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTG---NGGCEQLCF---SYPVEFPQNKLHYKCD 213
G+R I+ QP ++ C GGC +C SY C
Sbjct: 455 NAW-GIR---IYQKRTQPTVRSHACEVDPYGMPGGCSHICLLSSSYKTR--------TCR 502
Query: 214 CATGTPSASDPKKCT-TMDEYLVFSTRTE---IRALHLDPTLTAVPFKTVSNLTNVVGVE 269
C TG SD + C +E +F + +R + L+ + + NL N ++
Sbjct: 503 CRTGFNLGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADEYMIPIENLVNPRALD 562
Query: 270 FDYADDKILFTQIRPW--AKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
F + I F + + T + +L NV G+ D+ + + +T
Sbjct: 563 FHAETNYIYFADTTSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWT 616
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 46 LLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104
L++W ++ Q+P I +S L G +VS I P LTID + +Y+ D L I++
Sbjct: 2331 LMFWTNWNEQHPSIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERC 2390
Query: 105 SYNGGNRQIIRRNLPNP-MGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLS 163
Y+G R +I ++ P + +AV+ + ++W D R + +++K + + +R+ +
Sbjct: 2391 EYDGSQRHVIVKSGPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKI---LRSDIP 2447
Query: 164 GLRDIAIFDIVNQPPD-ENNPCFRTGNGGCEQLCFSYP 200
+ + I + N E +PC NGGC LC P
Sbjct: 2448 H-QPMGIIAVANDTNSCELSPCALL-NGGCHDLCLLTP 2483
Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D G + +I ++ D + I++NG+ + +D ++YW D +LI+
Sbjct: 1924 IYWTDMG-FNKISRAKRDQTWKEDIITNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARL 1982
Query: 107 NGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
NG R II + L P IAVH K ++W +
Sbjct: 1983 NGSFRYVIISQGLDQPRSIAVHPEKGLLFWTE 2014
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 46 LLYWIDYGQYPRIGKSYLDGSKWTS----IVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
LLYW D + RI + L S S +V +G++ P LT+D ++YW+D+ LD I
Sbjct: 1301 LLYWTDVVE-DRIYRGKLSESGGVSAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQI 1359
Query: 102 QKISYNGGNR-QIIRRNLPNPMGIAV--HKSDVYWV--DRNLRTVYKASKLASTNITLPT 156
+ +G R +I + +P IA+ ++W D N + AS + T+
Sbjct: 1360 EVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSGAGRKTIYK 1419
Query: 157 PIRTG 161
++TG
Sbjct: 1420 DMKTG 1424
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
+P ++YW G + I ++ +DG+ +V + P L +D + +YW D +L +
Sbjct: 4035 NPKRGMMYWTVVGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSI 4094
Query: 101 IQKISYNG 108
I + Y+G
Sbjct: 4095 IGSVLYDG 4102
Score = 38.1 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 46 LLYWIDYGQY--PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
+YWID + RI + L+GS +V N ++P L +D ++YW D + +I+
Sbjct: 3056 FIYWIDSSRPNGSRINRMCLNGSD-IKVVHN-TAVPNALAVDWIGKNLYWSDTEKRIIEV 3113
Query: 104 ISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVD 135
NG I+ R P + + +YW+D
Sbjct: 3114 SKLNGLYPTILVSKRLKFPRDLSLDPQAGYLYWID 3148
Score = 37.7 bits (86), Expect = 0.14, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMD---EYLVFSTRTEIRALHLD 248
C Q+C Q+K KC C G D + CT++D +++FS R EIR + L
Sbjct: 1224 CSQVC-------EQHKHTVKCSCYEGWKLDVDGESCTSVDPFEAFIIFSIRHEIRRIDLH 1276
Query: 249 PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
++ V L N + ++F + + +T +
Sbjct: 1277 KRDYSL---LVPGLRNTIALDFHFNQSLLYWTDV 1307
Score = 35.0 bits (79), Expect = 1.0, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 210 YKCDCATGTPSASD-PKKCTTMDE---YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNV 265
YKC C G D P C ++ + +L+ + EIR + D + + L NV
Sbjct: 2989 YKCLCTDGYEIQPDNPNGCKSLSDEEPFLILADHHEIRKISTDGSNYTL---LKQGLNNV 3045
Query: 266 VGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASSN 302
+ ++FDY ++ I WI ++ P+ + N
Sbjct: 3046 IAIDFDYREEFIY-----------WIDSSRPNGSRIN 3071
Score = 33.9 bits (76), Expect = 2.0, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Query: 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE 232
N C GC Q C PV YKC C G D K C +DE
Sbjct: 2928 NECLSKKVSGCSQDCQDLPVS-------YKCKCWPGFQLKDDGKTCVDIDE 2971
>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus
GN=Lrp5 PE=1 SV=3
Length = 1614
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 14/244 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW D+G+ PRI ++ +DGS IV + I P LTID++ +YW DAKL
Sbjct: 157 LDPAHGYMYWTDWGEAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 216
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I + + +G RQ ++ +L +P + + +YW D R+++ +K I
Sbjct: 217 FIHRANLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEQ---RKEI 273
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
+ L DI + QPP + PC NGGC LC P E Y C C TG
Sbjct: 274 LSALYSPMDIQVLSQERQPP-FHTPC-EEDNGGCSHLCLLSPRE-----PFYSCACPTGV 326
Query: 219 PSASDPKKCTT-MDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYADDK 276
+ K C T +E L+ + RT++R + LD P T + + V ++ + + +++D +
Sbjct: 327 QLQDNGKTCKTGAEEVLLLARRTDLRRISLDTPDFTDIVLQ-VGDIRHAIAIDYDPLEGY 385
Query: 277 ILFT 280
+ +T
Sbjct: 386 VYWT 389
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 119/246 (48%), Gaps = 20/246 (8%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ L+YW D+G+ P+I + LDG +V+ + P L +D+Q +YW DAK D
Sbjct: 465 LHPVMGLMYWTDWGENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTD 524
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I+ I+ +G R+ ++ LP+ G + +YW D R++ + K+ ++ + +
Sbjct: 525 KIEVINIDGTKRKTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQL 584
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L GL+ + + +V NPC GNGGC LCF P KC C G
Sbjct: 585 -PDLMGLKAVNVAKVVG-----TNPC-ADGNGGCSHLCFFTPRA-------TKCGCPIGL 630
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDP--TLTAVPFKTVSNLTNVVGVEFDYADDK 276
SD K C + +LVF++R I + L+ A+P V + ++FD +++
Sbjct: 631 ELLSDMKTCIIPEAFLVFTSRATIHRISLETNNNDVAIPLTGVKEAS---ALDFDVSNNH 687
Query: 277 ILFTQI 282
I +T +
Sbjct: 688 IYWTDV 693
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 14/262 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW ++G PRI ++++DG+ ++V + + DLTID +YW D +
Sbjct: 767 LDPTKGYIYWTEWGGKPRIVRAFMDGTNCMTLV-DKVGRANDLTIDYADQRLYWTDLDTN 825
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I+ + G R +I +LP P G+ + +YW D NL ++ +A K + N TL I+
Sbjct: 826 MIESSNMLGQERMVIADDLPYPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTL---IQ 882
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTP 219
L + DI +F Q D N C + NG C QLC + P ++C CA+
Sbjct: 883 GHLDFVMDILVFHSSRQ--DGLNDCVHS-NGQCGQLCLAIPG-------GHRCGCASHYT 932
Query: 220 SASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILF 279
+ C+ +L+FS + I + D L+ + L NV + +D D I +
Sbjct: 933 LDPSSRNCSPPSTFLLFSQKFAISRMIPDDQLSPDLVLPLHGLRNVKAINYDPLDKFIYW 992
Query: 280 TQIRPWAKIAWIPTTNPSSASS 301
R K A T PS +S
Sbjct: 993 VDGRQNIKRAKDDGTQPSMLTS 1014
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 57 RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR- 115
+I ++ LDG++ + + G+ P L +D ++WVDA L I+ +G NR +
Sbjct: 1091 KIERASLDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGANRLTLED 1150
Query: 116 RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVN 175
N+ P+G+ V +YW+DR + + + K T T L+G+ + + V+
Sbjct: 1151 ANIVQPVGLTVLGRHLYWIDRQQQMIERVEKTTGDKRTRVQGRVTHLTGIHAV---EEVS 1207
Query: 176 QPPDENNPCFRTGNGGCEQLCFS 198
+PC R NGGC +C +
Sbjct: 1208 LEEFSAHPCARD-NGGCSHICIA 1229
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
+ PL +YW D + I ++YLDGS ++V+ I+ P + +D ++YW D D
Sbjct: 379 YDPLEGYVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTD 437
Query: 100 LIQKISYNGGNRQI-IRRNLPNPMGIAVH--KSDVYWVD 135
I+ NG +R+I + +L P I +H +YW D
Sbjct: 438 RIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTD 476
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D I +++++GS ++ G+ P + +D ++YW D + I+
Sbjct: 688 IYWTDV-SLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARL 746
Query: 107 NGGNRQIIR-RNLPNPMGIAVH--KSDVYWVD 135
+G RQ++ R+L NP +A+ K +YW +
Sbjct: 747 DGQFRQVLVWRDLDNPRSLALDPTKGYIYWTE 778
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 47 LYWIDYGQYPRIGKSYLD--GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104
+YW D + I ++YL+ G+ +IV +G+ P L D +YW D++ + I+
Sbjct: 76 VYWTDVSE-EAIKQTYLNQTGAAAQNIVISGLVSPDGLACDWVGKKLYWTDSETNRIEVA 134
Query: 105 SYNGGNRQIIR-RNLPNPMGIAVHKSD--VYWVD 135
+ NG +R+++ ++L P IA+ + +YW D
Sbjct: 135 NLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTD 168
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISM-----PRDLTIDMQTHDVYWV 94
+ PL + +YW+D Q I ++ DG++ + + S S+ P DL+ID+ + ++W
Sbjct: 983 YDPLDKFIYWVDGRQ--NIKRAKDDGTQPSMLTSPSQSLSPDRQPHDLSIDIYSRTLFWT 1040
Query: 95 DAKLDLIQKISYNGGNRQII-RRNLPNPMGIAVHKSDVYWVDRNLR 139
+ I +G ++ R + P IAV+ Y N++
Sbjct: 1041 CEATNTINVHRLDGDAMGVVLRGDRDKPRAIAVNAERGYMYFTNMQ 1086
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRNLPNPMGIAVH--KSDV 131
G+ L D+ + +YW D L I + NG + +I L P G+AV ++
Sbjct: 672 GVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWMGKNL 731
Query: 132 YWVD 135
YW D
Sbjct: 732 YWAD 735
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats.
Identities = 80/255 (31%), Positives = 127/255 (49%), Gaps = 25/255 (9%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L+W ++G YPRI +S LDG++ +V+ IS P +++D Q +YW DA++D I
Sbjct: 2018 PEKGYLFWTEWGHYPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKI 2077
Query: 102 QKISYNGG-NRQII-RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
++I G NR+++ N + ++V + +YW DR + N T P+R
Sbjct: 2078 ERIDLETGENREVVLSSNNMDMFSVSVFEDFIYWSDRT-HANGSIKRGCKDNATDSVPLR 2136
Query: 160 TGLS-GLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
TG+ L+DI +F+ Q N C NGGC+QLC + C CA G
Sbjct: 2137 TGIGVQLKDIKVFNRDRQ--KGTNVC-AVANGGCQQLCLY------RGGGQRACACAHGM 2187
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHL--DPTLTA--VPFKTVSNLTNVVGVEFDY-- 272
A D C YL++S RT ++++HL + L A PF+ ++ NV+ + FDY
Sbjct: 2188 -LAEDGASCREYAGYLLYSERTILKSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRA 2246
Query: 273 -----ADDKILFTQI 282
++I F+ I
Sbjct: 2247 GTSPGTPNRIFFSDI 2261
Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
LYW D+G + IG+ +DGS + IV I+ P LT+D T +YW DA+ D I+ S
Sbjct: 3160 LYWTDWGDHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFASL 3219
Query: 107 NGGNRQII-RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
+G NR ++ +++P+ + + + VYW D +++ +A K N TL + + L
Sbjct: 3220 DGSNRHVVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGANKTL---LISTLHRP 3276
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
D+ +F + QP N+PC + NGGC LC P +KC C T D +
Sbjct: 3277 MDLHVFHALRQPDVPNHPC-KVNNGGCSNLCLLSP------GGGHKCACPTNFYLGGDGR 3329
Query: 226 KCTT 229
C +
Sbjct: 3330 TCVS 3333
Score = 95.1 bits (235), Expect = 9e-19, Method: Composition-based stats.
Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 24/309 (7%)
Query: 27 LKTSFRSANTTSP----FSPLPRLLYWIDY-GQYPRIGKSYLDGSKWTSIVSNGIS--MP 79
L+T+ + + P P +L+W D+ PRI + + G+ +I S P
Sbjct: 1378 LRTTLLAGDIEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGAGRRTIHRETGSGGWP 1437
Query: 80 RDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRRN--LPNPMGIAVHKSDVYWVDR 136
LT+D + W+DA+ D I Y+G G+ +++R + L +P + ++ +VYW D
Sbjct: 1438 NGLTVDYLEKRILWIDARSDAIYSARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDW 1497
Query: 137 NLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC-FRTGNGGCEQL 195
T+ KA+K N+T+ RT D+ ++ QP NPC G G C L
Sbjct: 1498 RTNTLAKANKWTGHNVTVVQ--RTNTQPF-DLQVYHPSRQPMAP-NPCEANGGRGPCSHL 1553
Query: 196 CFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAV 254
C + + + C C D C ++L+++ + EIR + LD P +
Sbjct: 1554 CL---INYNRT---VSCACPHLMKLHKDNTTCYEFKKFLLYARQMEIRGVDLDAPYYNYI 1607
Query: 255 PFKTVSNLTNVVGVEFDYADDKILFTQIRPWA-KIAWIPTTNPSS-ASSNLTNVVGVEFD 312
TV ++ NV +++D + ++ ++ +R A K A+I T + S++L N G+ D
Sbjct: 1608 ISFTVPDIDNVTVLDYDAREQRVYWSDVRTQAIKRAFINGTGVETVVSADLPNAHGLAVD 1667
Query: 313 YADDKILFT 321
+ + +T
Sbjct: 1668 WVSRNLFWT 1676
Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 20/197 (10%)
Query: 46 LLYWIDYGQ-YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104
L++W ++ + +P I ++ L G+ +++ I P L ID + +Y+ DA LD I++
Sbjct: 2346 LMFWTNWNELHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERC 2405
Query: 105 SYNGGNRQIIRRNLP-NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLS 163
Y+G +R +I ++ P +P G+AV+ ++W D R V +A+K +++ L +R +
Sbjct: 2406 EYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKYVGSDMKL---LRVDIP 2462
Query: 164 GLRDIAIFDIVNQPPD-ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222
+ + I + N E +PC R NGGC+ LC ++ H C C G
Sbjct: 2463 Q-QPMGIIAVANDTNSCELSPC-RINNGGCQDLCLL------THQGHVNCSCRGGRILQE 2514
Query: 223 D------PKKCTTMDEY 233
D C DE+
Sbjct: 2515 DFTCRAVNSSCRAQDEF 2531
Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G +P+I + +DG+ ++V + I P L +D +YW DAKL +I
Sbjct: 4011 PLRGTMYWSDWGNHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVI 4070
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I NG + + +R L +P I V + +Y V V+K K + + +
Sbjct: 4071 GSIRLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPL---INL 4127
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYP 200
GLS D+ ++ Q P+ NPC R CE LC P
Sbjct: 4128 TGGLSHASDVVLYHQHKQ-PEVTNPCDRK---KCEWLCLLSP 4165
Score = 76.3 bits (186), Expect = 4e-13, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL LYW D I + +DGS T + S G P L ID +YW+ + I
Sbjct: 1712 PLRGKLYWTDGDN---ISMANMDGSNHTLLFS-GQKGPVGLAIDFPESKLYWISSGNHTI 1767
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ + +G ++I R L +A+ ++W D+ + +K + + +
Sbjct: 1768 NRCNLDGSELEVIDTMRSQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSGSVV---L 1824
Query: 159 RTGLSGLRDIAIFDIVNQPPDE-NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATG 217
R + + + ++D Q E NPC NG C QLC P ++ C C G
Sbjct: 1825 RNSTTLVMHMKVYDESIQLEHEGTNPC-SVNNGDCSQLCL------PTSETTRSCMCTAG 1877
Query: 218 TPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKI 277
S + C + +L++S IR + LDP + VS + VG++F +D I
Sbjct: 1878 YSLRSGQQACEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTI 1937
Query: 278 LFTQI 282
+ +
Sbjct: 1938 YWVDM 1942
Score = 75.9 bits (185), Expect = 5e-13, Method: Composition-based stats.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 21 LKKKKKLKTSFRSANTTSP----FSPLPRLLYWIDYGQYP------RIGKSYLDGS-KWT 69
L+K + + + T P PL +YW D+ + P R+ ++++DGS +
Sbjct: 633 LEKAAQTRKTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSRRGRLERAWMDGSHRDI 692
Query: 70 SIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRR--NLPNPMGIAVH 127
+ S + P L++D+ +YWVDA D I+ I NG +R+I+ L + G+ H
Sbjct: 693 FVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVYEGPELNHAFGLCHH 752
Query: 128 KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT 187
+ ++W + +VY+ + + T +R+ + +I ++D Q N C R
Sbjct: 753 GNYLFWTEYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRMYD-AQQQQVGTNKC-RV 810
Query: 188 GNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYL 234
NGGC LC + P +C CA +D C Y+
Sbjct: 811 NNGGCSSLCLATPGS-------RQCACAEDQVLDTDGVTCLANPSYV 850
Score = 75.5 bits (184), Expect = 8e-13, Method: Composition-based stats.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 26/301 (8%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+++ DYGQ P++ + +DG T +V + I P +T+D+ + VYW DA LD I+ + Y
Sbjct: 338 VFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDY 397
Query: 107 NGGNRQIIRRN--LPNPMGIAVHKSDVYWVD------RNLRTVYKASKLASTNITLPTPI 158
G RQ I + + + G+ V ++ +Y + + +V + ++ ST + T +
Sbjct: 398 EGKGRQTIIQGILIEHLYGLTVFENYLYATNSDNANTQQKTSVIRVNRFNSTEYQVVTRV 457
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRT---GNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
G + + I+ QP ++ C GGC +C + C C
Sbjct: 458 DKGGA----LHIYHQRRQPRVRSHACENDQYGKPGGCSDICL-----LANSHKARTCRCR 508
Query: 216 TGTPSASDPKKCTTMDE--YLVFSTRTE--IRALHLDPTLTAVPFKTVSNLTNVVGVEFD 271
+G SD K C + +LV+ IR + + + + NL N ++F
Sbjct: 509 SGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFH 568
Query: 272 YADDKILFTQIRPW--AKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFTQIRPWAKI 329
I F + + T + + NV GV D+ D + +T P I
Sbjct: 569 AETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGVAVDWMGDNLYWTDDGPKKTI 628
Query: 330 A 330
+
Sbjct: 629 S 629
Score = 48.9 bits (115), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW+D G I ++ D + +V+NGI + +D ++YW D D+I+
Sbjct: 1937 IYWVDMG-LSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARL 1995
Query: 107 NGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
NG R +I + L P I VH K ++W +
Sbjct: 1996 NGSFRYVVISQGLDKPRAITVHPEKGYLFWTE 2027
Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATG-TPSASDPKKC---TTMDEYLVFSTRTEIRALHL 247
C QLC + YKC C G P DP C T + +L+F+ R +R L+L
Sbjct: 2993 CSQLCIN-------THGSYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNL 3045
Query: 248 DPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
D + + L N V ++FDY + I +T +
Sbjct: 3046 DGSNYTL---LKQGLNNAVALDFDYREQMIYWTDV 3077
Score = 44.3 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 10 LIWAIRLALRLLKKKKK----LKTSFRSANTTSPFSPLPRLLYWIDYG-QYPRIGKSYLD 64
LI+A R LR L LK +A F +++YW D Q I + +L+
Sbjct: 3032 LIFANRYYLRKLNLDGSNYTLLKQGLNNA-VALDFDYREQMIYWTDVTTQGSMIRRMHLN 3090
Query: 65 GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN---LPNP 121
GS + G+S P L +D ++YW D D I+ NG R ++ + P
Sbjct: 3091 GSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRA 3150
Query: 122 MGIAVHKSDVYWVD 135
+ + V +YW D
Sbjct: 3151 LVVDVQNGYLYWTD 3164
Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTS---IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
LYW D + LD TS ++ G++ P L +D ++YWV++ LD I+
Sbjct: 1312 LYWTDVVEDKIYRGKLLDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEV 1371
Query: 104 ISYNGGNR-QIIRRNLPNPMGIAVHKSD--VYWVD 135
+G R ++ ++ +P IA+ D ++W D
Sbjct: 1372 AKLDGTLRTTLLAGDIEHPRAIALDPRDGILFWTD 1406
Score = 42.0 bits (97), Expect = 0.008, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 74 NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSD 130
+G+ MPR + ID +VYW D+ D+I+ G NR+ +I + P I V +
Sbjct: 3956 SGLKMPRGIAIDWVAGNVYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLRGT 4015
Query: 131 VYWVD 135
+YW D
Sbjct: 4016 MYWSD 4020
Score = 39.7 bits (91), Expect = 0.042, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMD---EYLVFSTRTEIRALHLD 248
C Q C QNK KC C G D + C ++D +++FS R EIR + L
Sbjct: 1234 CSQKC-------DQNKFSVKCSCYEGWVLEPDGESCRSLDPFKPFIIFSNRHEIRRIDLH 1286
Query: 249 PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
+V V L N + ++F + + +T +
Sbjct: 1287 KGDYSV---LVPGLRNTIALDFHLSQSALYWTDV 1317
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 30/296 (10%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L+W ++GQYPRI +S LDG++ +V+ IS P +++D + +YW DA+ D I
Sbjct: 2013 PEKGYLFWTEWGQYPRIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKI 2072
Query: 102 QKISYN-GGNRQIIRRNLPNPM-GIAVHKSDVYWVDRNLR--TVYKASKLASTNITLPTP 157
++I G NR+++ + M ++V + +YW DR ++ + SK N T
Sbjct: 2073 ERIDLETGENREVVLSSDNMDMFSVSVFEDYIYWSDRTHANGSIKRGSK---DNATESVS 2129
Query: 158 IRTGLS-GLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
+RTG+ L+DI +F+ Q N C + NGGC+QLC + C CA
Sbjct: 2130 LRTGIGVQLKDIKVFNRARQKG--TNVCAQN-NGGCQQLCLF------RGGGRRTCACAH 2180
Query: 217 GTPSASDPKKCTTMDEYLVFSTRTEIRALHL--DPTLTA--VPFKTVSNLTNVVGVEFDY 272
G S D C D YL++S RT ++++HL + L A PF+ ++ NV+ + FDY
Sbjct: 2181 GMLS-EDGVSCRDYDGYLLYSERTILKSIHLSDENNLNAPIKPFEDAEHMKNVIALAFDY 2239
Query: 273 -----ADDKILFTQIRPWAKIAWI--PTTNPSSASSNLTNVVGVEFDYADDKILFT 321
++I ++ I + I I T + N+ +V G+ + D + +T
Sbjct: 2240 RYGTKGSNRIFYSDIH-FGNIQQINDDGTGRRTIVENVGSVEGLAYHRGWDTLYWT 2294
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
LYW D+G + IGK +DG+ + IV I+ P LT+D +YW DA+ D I+ S
Sbjct: 3156 LYWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFASL 3215
Query: 107 NGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
+G NR ++ +++P+ + + + +YW D +++ +A K N TL + + L
Sbjct: 3216 DGSNRHTVLSQDIPHIFALTLFEDYIYWTDWETKSINRAHKTTGANKTL---LISTLHRP 3272
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
DI I+ QP N+PC +T N GC LC P +KC C T SD K
Sbjct: 3273 MDIHIYHPYRQPDVPNHPC-KTNNAGCSNLCLLSP------GGGHKCACPTNFYLGSDGK 3325
Query: 226 KCTT 229
C +
Sbjct: 3326 TCVS 3329
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 24/318 (7%)
Query: 18 LRLLKKKKKLKTSFRSANTTSP----FSPLPRLLYWIDY-GQYPRIGKSYLDGSKWTSIV 72
+ + K ++T+ + + P P +L+W D+ PRI + + G+ +I
Sbjct: 1366 IEVAKLDGTMRTTLLAGDIEHPRAIALDPRYGILFWTDWDASLPRIEAASMSGAGRRTIH 1425
Query: 73 SNGISM--PRDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRRN--LPNPMGIAVH 127
S P LT+D + W+DA+ D I Y+G G+ +++R + L +P + ++
Sbjct: 1426 KETGSGGWPNGLTVDYLEKRILWIDARSDAIYSALYDGTGHIEVLRGHEYLSHPFAVTLY 1485
Query: 128 KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT 187
+VYW D T+ KA+K N+T+ RT D+ ++ QP NPC
Sbjct: 1486 GGEVYWTDWRTNTLAKANKWTGHNVTVVQ--RTNTQPF-DLQVYHPSRQPL-APNPCEAN 1541
Query: 188 GNGG-CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALH 246
G G C LC + + + C C D C ++L+++ + EIR +
Sbjct: 1542 GGKGPCSHLCL---INYNRT---LSCACPHLMKLDKDNTTCYEFKKFLLYARQMEIRGVD 1595
Query: 247 LD-PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWA-KIAWIPTTNPSS-ASSNL 303
+D P + TV ++ NV V++D + +I ++ +R K A+I T + S++L
Sbjct: 1596 IDNPYYNYIISFTVPDIDNVTVVDYDAVEQRIYWSDVRTQTIKRAFINGTGVETVVSADL 1655
Query: 304 TNVVGVEFDYADDKILFT 321
N G+ D+ + +T
Sbjct: 1656 PNAHGLSVDWVSRNLFWT 1673
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 46 LLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104
L++W ++ Q+P I ++ L G+ I+ I P L ID + +Y+ DA LD I++
Sbjct: 2339 LMFWTNWNEQHPSIMRATLSGANVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERC 2398
Query: 105 SYNGGNRQIIRRNLP-NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLS 163
Y+G +R +I ++ P +P G+AV+ ++W D R V +A+K T++ L +R +
Sbjct: 2399 EYDGSHRHVILKSEPVHPFGLAVYGDYIFWTDWVRRAVQRANKYVGTDMKL---LRVDIP 2455
Query: 164 GLRDIAIFDIVNQPPD-ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDC 214
+ + I + N E +PC R NGGC+ LC P K H C C
Sbjct: 2456 -QQPMGIIAVANDTDSCELSPC-RVNNGGCQDLCLLTP------KGHVNCSC 2499
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 15 RLALRLLKKKKKLKTSFRSANTTSPFS----PLPRLLYWIDYGQYPRIGKSYLDGSKWTS 70
R + + + K + + + S P + PL +YW D+G +P+I + +DG+ +
Sbjct: 3978 RDVIEVAQMKGENRKTLISGMIDEPHAIVVDPLRGTMYWSDWGNHPKIETAAMDGTLRET 4037
Query: 71 IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII---RRNLPNPMGIAVH 127
+V + I P L +D +YW DAKL +I I NG + + ++ L +P I +
Sbjct: 4038 LVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVVAIDNKKGLSHPFSIDIF 4097
Query: 128 KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT 187
+ +Y V ++K K ++ T + +GL+ D+ ++ Q P+ NPC R
Sbjct: 4098 EDYIYGVTYINNRIFKIHKFGHKSV---TNLTSGLNHATDVVLYHQYKQ-PEVTNPCDRK 4153
Query: 188 GNGGCEQLCFSYP 200
CE LC P
Sbjct: 4154 ---KCEWLCLLSP 4163
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 26/308 (8%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +++ DYGQ P++ + +DG T +V + I P +T+D+ + VYW DA LD
Sbjct: 332 LDPAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLD 391
Query: 100 LIQKISYNGGNRQIIRRN--LPNPMGIAVHKSDVYWVD------RNLRTVYKASKLASTN 151
I+ + Y G NR I + + + G+ V ++ +Y + + +V + ++ ST
Sbjct: 392 YIEVVDYEGKNRHTIIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTE 451
Query: 152 ITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCF--RTGN-GGCEQLCFSYPVEFPQNKL 208
+ T + G + + I+ QP ++ C + G GGC +C +
Sbjct: 452 YQVVTRVDKGGA----LHIYHQRRQPTVRSHACEPDQFGKPGGCSDICL-----LGNSHK 502
Query: 209 HYKCDCATGTPSASDPKKCTTMDE--YLVFSTRTE--IRALHLDPTLTAVPFKTVSNLTN 264
C C +G SD K C + +LV+ IR + + + + NL N
Sbjct: 503 SRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMN 562
Query: 265 VVGVEFDYADDKILFTQIRPW--AKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFTQ 322
++F I F + + T + + NV G+ D+ + + +T
Sbjct: 563 PRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGIAVDWMGNNLYWTD 622
Query: 323 IRPWAKIA 330
P I+
Sbjct: 623 DGPKKTIS 630
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 18/244 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL LYW D I + +DGS T + +N P L ID +YW+ + I
Sbjct: 1709 PLHGKLYWTDG---DNISVANMDGSNRTLLFTNQRG-PVGLAIDYPESKLYWISSGNGTI 1764
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ + +G + ++I + L +A+ ++W D+ + +K T +T+ +
Sbjct: 1765 NRCNLDGSDLEVIVAVKSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVTV---L 1821
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
R + + + ++D Q +NPC NG C QLC P ++ C C G
Sbjct: 1822 RNSTTLVMLMKVYDESIQQAG-SNPC-SVNNGDCSQLCL------PTSETSRSCMCTAGY 1873
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKIL 278
S + C + +L++S IR + LDP + VS + VG++F +D I
Sbjct: 1874 SLKSGQQSCEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIY 1933
Query: 279 FTQI 282
+ +
Sbjct: 1934 WVDM 1937
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 16 LALRLLKKKKKLKTSFRSANTTSP----FSPLPRLLYWIDYGQYPR------IGKSYLDG 65
+++ L+K + + + T P PL +YW D+ + P+ I ++++DG
Sbjct: 629 ISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSKRGKIERAWMDG 688
Query: 66 S-KWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN--LPNPM 122
S + I S + P L++D+ +YWVDA D I+ + NG R+I+ L +
Sbjct: 689 SNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVYEGPELNHAF 748
Query: 123 GIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENN 182
G+ + S ++W + ++Y+ + +S ++L +R + +I ++D Q N
Sbjct: 749 GLCHYSSFLFWTEYRSGSIYRLDQ-SSKAVSL---LRNERPPIFEIRMYDAQQQQVGSNK 804
Query: 183 PCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYL 234
R NGGC LC + P +C CA +D C Y+
Sbjct: 805 --CRVNNGGCSSLCLATP-------RGRQCACAEDQILGADSVTCEANPSYI 847
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW+D G I ++ D + +V+NGI + +D ++YW D D+I+
Sbjct: 1932 IYWVDMG-LSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARL 1990
Query: 107 NGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLAST 150
NG R +I + L P I VH K ++W + + S+L T
Sbjct: 1991 NGSFRYVVISQGLDKPRAITVHPEKGYLFWTEWGQYPRIERSRLDGT 2037
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 10 LIWAIRLALRLLKKKKK----LKTSFRSANTTSPFSPLPRLLYWIDYG-QYPRIGKSYLD 64
LI+A R LR L LK +A F +++YW D Q I + +++
Sbjct: 3028 LIFANRYYLRKLNLDGSNYTLLKQGLNNA-VALDFDYREQMIYWTDVTTQGSMIRRMHIN 3086
Query: 65 GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN---LPNP 121
GS + G+S P L +D ++YW D D I+ NG R ++ + P
Sbjct: 3087 GSNVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRA 3146
Query: 122 MGIAVHKSDVYWVD 135
+ + V +YW D
Sbjct: 3147 LVVDVQNGYLYWTD 3160
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 69 TSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH 127
T + +G+ MPR + +D ++YW D+ D+I+ G NR+ +I + P I V
Sbjct: 3949 THLNISGLKMPRGIAVDWVAGNIYWTDSGRDVIEVAQMKGENRKTLISGMIDEPHAIVVD 4008
Query: 128 --KSDVYWVD 135
+ +YW D
Sbjct: 4009 PLRGTMYWSD 4018
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTS---IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
LYW D + L+ TS ++ G++ P L +D ++YWV++ LD I+
Sbjct: 1309 LYWTDVVEDKIYRGKLLENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEV 1368
Query: 104 ISYNGGNR-QIIRRNLPNPMGIAV--HKSDVYWVD 135
+G R ++ ++ +P IA+ ++W D
Sbjct: 1369 AKLDGTMRTTLLAGDIEHPRAIALDPRYGILFWTD 1403
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 210 YKCDCATGTPSASD-PKKC---TTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNV 265
YKC C G D P C T + +L+F+ R +R L+LD + + L N
Sbjct: 3000 YKCLCIEGYKLKPDNPTSCKAVTDEEPFLIFANRYYLRKLNLDGSNYTL---LKQGLNNA 3056
Query: 266 VGVEFDYADDKILFTQI 282
V ++FDY + I +T +
Sbjct: 3057 VALDFDYREQMIYWTDV 3073
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 205 QNKLHYKCDCATGTPSASDPKKCTTMD---EYLVFSTRTEIRALHLDPTLTAVPFKTVSN 261
Q+K + KC C G D + C ++D +++FS R EIR + L +V V
Sbjct: 1237 QDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNRHEIRRIDLHRGDYSV---LVPG 1293
Query: 262 LTNVVGVEFDYADDKILFTQI 282
L N + ++F + +T +
Sbjct: 1294 LRNTIALDFHLNQSSLYWTDV 1314
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats.
Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 36/267 (13%)
Query: 26 KLKTSFR----SANTTSPFS----PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS 77
+L SFR S P S P L+W ++GQ P IGK+ LDGS+ IVS GI+
Sbjct: 1981 RLNGSFRYVIISQGLDQPRSIAVHPEKGFLFWTEWGQVPCIGKARLDGSEKVMIVSVGIT 2040
Query: 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISYN-GGNRQIIRRNLP-NPMGIAVHKSDVYWVD 135
P ++ID + + +YW DA+ D I++I + G NR+++ + +AV + +YW D
Sbjct: 2041 WPNGISIDYEENKLYWCDARSDKIERIDLDTGANREVLLSGSNVDLFSVAVFGAYIYWSD 2100
Query: 136 R-----NLRTVYKASKLASTNITLPTPIRTGLS-GLRDIAIFDIVNQPPDENNPCFRTGN 189
R ++R +K A+ +T+ RTGL L++I IF+ V + N C + N
Sbjct: 2101 RAHANGSVRRGHKND--ATETVTM----RTGLGVNLKEIKIFNRVRE--KGTNVCAKE-N 2151
Query: 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHL-D 248
GGC+QLC + C CA G A D C + YL++S RT ++++HL D
Sbjct: 2152 GGCQQLCLY------RGNSRRTCACAHGY-LAGDGVTCLRHEGYLLYSGRTILKSIHLSD 2204
Query: 249 PTLTAVPFKTVSN---LTNVVGVEFDY 272
T P + N N++ + FDY
Sbjct: 2205 ETNLNSPVRPYENPNYFKNIIALAFDY 2231
Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 18/249 (7%)
Query: 44 PR--LLYWIDY-GQYPRIGKSYLDGSKWTSIVSNGIS--MPRDLTIDMQTHDVYWVDAKL 98
PR +L+W D+ +PRI + + G+ +I + + P LT+D + W DA+
Sbjct: 1387 PRYGILFWTDWDANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDARS 1446
Query: 99 DLIQKISYNGGNR-QIIRRN--LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLP 155
D I Y+G N +IIR + L +P ++++ S+VYW D T+ KA+K N+++
Sbjct: 1447 DAIYSAFYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLAKANKWTGQNVSV- 1505
Query: 156 TPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCA 215
I+ + D+ I+ QP N G G C LC + C C
Sbjct: 1506 --IQKTSAQPFDLQIYHPSRQPQAPNPCAANEGRGPCSHLCLI------NHNRSAACACP 1557
Query: 216 TGTPSASDPKKCTTMDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVVGVEFDYAD 274
+SD K C M ++L+++ R+EIR + +D P + + TV ++ +V ++FD ++
Sbjct: 1558 HLMKLSSDKKTCYEMKKFLLYARRSEIRGVDIDNPYVNFITAFTVPDIDDVAVIDFDASE 1617
Query: 275 DKILFTQIR 283
+++ +T I+
Sbjct: 1618 ERLYWTDIK 1626
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 21/285 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ LYW D I + +DGS + I+ P L+ID + +YW+ + I
Sbjct: 1702 PVRGKLYWTDGNT---INMANMDGSN-SKILFQNQKEPVGLSIDYVENKLYWISSGNGTI 1757
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ + +GGN ++I + L + + ++W D+NL + +K N P+ +
Sbjct: 1758 NRCNLDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCNKRDGRN---PSIL 1814
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
R SG+ + ++D + +N C + NGGC QLC P ++ C C G
Sbjct: 1815 RNKTSGVVHMKVYD--KEAQQGSNSC-QVNNGGCSQLCL------PTSETTRTCMCTVGY 1865
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKIL 278
+ C ++ +L++S IR + L+P +S VG++F +D I
Sbjct: 1866 YLQKNRMSCQGIESFLMYSVHEGIRGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIY 1925
Query: 279 FTQ--IRPWAKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
+T + ++ T ++ L V G+ D+ I +T
Sbjct: 1926 WTDMGLNKISRAKRDQTWKEDVVTNGLGRVEGIAVDWIAGNIYWT 1970
Score = 84.0 bits (206), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
LYWID +YP IG+ +DG+ + ++ IS P LTID H +YW D + I+ +
Sbjct: 3144 LYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNM 3201
Query: 107 NGGNR-QIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
+G +R ++ +++P + + + + +YW D +++ + K + + + +
Sbjct: 3202 DGSHRHKVPNQDIPGVIALTLFEDYIYWTDGKTKSLSRVHKTSGAD---RLSLINSWHAI 3258
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225
DI ++ QP + C NGGC LC P K H C C T A+D +
Sbjct: 3259 TDIQVYHSYRQPDVSKHLC-TVNNGGCSHLCLLGP-----GKTH-TCACPTNFYLAADNR 3311
Query: 226 KCTT 229
C +
Sbjct: 3312 TCLS 3315
Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 42 PLPRLLYWIDYGQ------YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVD 95
P+ +YW D+ + RI K+++DG V++ + P LT+D T +YW D
Sbjct: 654 PVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLWPNGLTLDFHTSTLYWCD 713
Query: 96 AKLDLIQKISYNGGNRQIIR--RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNIT 153
A D I+K+ NG +R+++ + L +P G++ H + V+W D ++++ L + +T
Sbjct: 714 AYYDHIEKVFLNGTHRKVVYSGKELNHPFGLSHHGNYVFWTDYMNGSIFQLD-LMTNEVT 772
Query: 154 LPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCD 213
L R L GL+ I+D Q D N C R NGGC LC + P C
Sbjct: 773 LLRHERAPLFGLQ---IYDPRKQQGD--NMC-RINNGGCGTLCLAIPA-------GRVCA 819
Query: 214 CATGTPSASDPKKCTTMDEYLVF 236
CA + CT E + F
Sbjct: 820 CADNQLLDENGTTCTFNPEEIRF 842
Score = 78.6 bits (192), Expect = 9e-14, Method: Composition-based stats.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 26/294 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ L++ DYG P+I + LDG T IV + P L +D+ VYWVD LD +
Sbjct: 335 PIAGKLFFTDYGNVPKIERCDLDGMNRTRIVYSKAEQPSALALDLVNRLVYWVDLYLDYV 394
Query: 102 QKISYNGGNRQII--RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+ Y G NR I R + + GI V + +Y + + + ++ T+I +
Sbjct: 395 GVVDYQGKNRHTIVQGRQVKHLYGITVFEDYLYATSSDNFNIIRINRFNGTDIHSIIKME 454
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTG---NGGCEQLCF---SYPVEFPQNKLHYKCD 213
+ R I + QP ++ C GGC +C SY C
Sbjct: 455 SA----RGIRTYQKRTQPTVRSHACEVDAYGMPGGCSHICLLSSSYKTR--------TCR 502
Query: 214 CATGTPSASDPKKCT-TMDEYLVFSTRTE---IRALHLDPTLTAVPFKTVSNLTNVVGVE 269
C TG SD + C +E +F + +R + L+ + + NL N ++
Sbjct: 503 CRTGFNMGSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADECMIPIENLVNPRALD 562
Query: 270 FDYADDKILFTQIRPW--AKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT 321
F + I F + + T + +L NV G+ D+ + + +T
Sbjct: 563 FHAEANYIYFADTTSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWT 616
Score = 70.1 bits (170), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 46 LLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104
L++W ++ Q+P I ++ L G +VS I P LTID + +Y+ D L I++
Sbjct: 2331 LMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERC 2390
Query: 105 SYNGGNRQIIRRNLPNP-MGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLS 163
Y+G R +I ++ P + +AV+ S ++W D R + +++K + +R+ +
Sbjct: 2391 EYDGSQRHVIVKSGPGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKI---LRSDIP 2447
Query: 164 GLRDIAIFDIVNQPPD-ENNPCFRTGNGGCEQLCFSYP 200
+ + I + N E +PC NGGC LC P
Sbjct: 2448 H-QPMGIIAVANDTNSCELSPCALL-NGGCHDLCLLTP 2483
Score = 48.5 bits (114), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D G +I ++ D + +V+NG+ + +D ++YW D +LI+
Sbjct: 1924 IYWTDMG-LNKISRAKRDQTWKEDVVTNGLGRVEGIAVDWIAGNIYWTDHGFNLIEVARL 1982
Query: 107 NGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
NG R II + L P IAVH K ++W +
Sbjct: 1983 NGSFRYVIISQGLDQPRSIAVHPEKGFLFWTE 2014
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 46 LLYWIDYGQYPRIGKSYLDGSKWTS----IVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
LLYW D + RI + L S S +V +G++ P LT+D ++YW+D+ LD I
Sbjct: 1301 LLYWTDVVE-DRIYRGKLSESGGVSAIEVVVEHGLATPEGLTVDWIAGNIYWIDSNLDQI 1359
Query: 102 QKISYNGGNR-QIIRRNLPNPMGIAV--HKSDVYWV--DRNLRTVYKASKLASTNITLPT 156
+ +G R +I + +P IA+ ++W D N + AS + T+
Sbjct: 1360 EVSKLDGSLRATLIAGAMEHPRAIALDPRYGILFWTDWDANFPRIESASMSGAGRKTIYK 1419
Query: 157 PIRTG 161
++TG
Sbjct: 1420 DMKTG 1424
Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
+P ++YW G + I ++ +DG+ +V + P LT+D +YW D +L +
Sbjct: 4035 NPKRGMMYWTVIGDHSHIEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSI 4094
Query: 101 IQKISYNG---GNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTP 157
I + Y+G ++ L +P I V + +Y +++ K ++ +
Sbjct: 4095 IGSVLYDGSSPVVSVSSKQGLLHPHRIDVFEDYIYGAGPK-NGIFRVQKFGHGSVEV--- 4150
Query: 158 IRTGLSGLRDIAI---FDIVNQPPDENNPCFRTGNGGCEQLCFSYP 200
+ G+ + I + + +N P NPC + C+ LC P
Sbjct: 4151 LALGVDKTKSILVSHRYKQLNLP----NPCL---DLSCDFLCLLNP 4189
Score = 40.0 bits (92), Expect = 0.031, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE---YLVFSTRTEIRALHLD 248
C Q+C Q K KC C G +D + CT++D +++FS R EIR + L
Sbjct: 1224 CSQVC-------EQQKHMVKCSCYEGWALGTDGESCTSVDSFEAFIIFSIRHEIRRIDLH 1276
Query: 249 PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
++ V L N + ++F + + +T +
Sbjct: 1277 KGDYSL---LVPGLRNTIALDFHFNQSLLYWTDV 1307
Score = 39.3 bits (90), Expect = 0.061, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Query: 210 YKCDCATGTPSASD-PKKCTTMDE---YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNV 265
YKC CA G + D P C ++ + +L+ + + EIR + D + + L NV
Sbjct: 2989 YKCHCAEGYETQPDNPNGCRSLSDEEPFLILADQHEIRKISTDGSNYTL---LKQGLNNV 3045
Query: 266 VGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFTQIRP 325
+ ++FDY ++ I WI ++ P+ + N + G +D K++ P
Sbjct: 3046 IALDFDYREEFIY-----------WIDSSRPNGSRINRMCLNG-----SDIKVVHNTAVP 3089
Query: 326 WA-KIAWI 332
A + WI
Sbjct: 3090 NALAVDWI 3097
Score = 38.9 bits (89), Expect = 0.065, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 46 LLYWIDYGQY--PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
+YWID + RI + L+GS +V N ++P L +D ++YW D + +I+
Sbjct: 3056 FIYWIDSSRPNGSRINRMCLNGSD-IKVVHN-TAVPNALAVDWIGKNLYWSDTEKRIIEV 3113
Query: 104 ISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVD 135
NG ++ R P + + ++YW+D
Sbjct: 3114 SKLNGLYPTVLVSKRLKFPRDLSLDPRAGNLYWID 3148
Score = 37.7 bits (86), Expect = 0.18, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 79 PRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
PR L + + +Y+ D LI + +G R+ I++ +L N GIAV +++YW +
Sbjct: 558 PRALDFHAEANYIYFADTTSFLIGRQKIDGTERETILKDDLDNVEGIAVDWIGNNLYWTN 617
Query: 136 RNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVN 175
R ++L + + T + G+S R I + D VN
Sbjct: 618 DGHRKTINVARLEKASQSRKTLLEGGMSHPRAIVV-DPVN 656
Score = 33.9 bits (76), Expect = 2.0, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Query: 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE 232
N C GC Q C PV YKC C G D K C +DE
Sbjct: 2928 NECLSKKISGCSQDCQDLPVS-------YKCKCWPGFQLKDDGKTCVDIDE 2971
Score = 32.0 bits (71), Expect = 9.0, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRRNLPNPMGIAVHKSDVYWVDRNL 138
+ D +YW D K I + NG G +I R++ + G+AV WV RNL
Sbjct: 1611 IDFDASEERLYWTDIKTQTITRAFINGTGLETVISRDIQSIRGLAVD-----WVSRNL 1663
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 34/254 (13%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW D+G+ PRI ++ +DGS IV + I P LTID++ +YW DAKL
Sbjct: 158 LDPAHGYMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLS 217
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I + + +G RQ ++ +L +P + + +YW D R+++ +K
Sbjct: 218 FIHRANLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNK------------ 265
Query: 159 RTG------LSGLRDIAIFDIVNQPPDENNPCFRT----GNGGCEQLCFSYPVEFPQNKL 208
RTG LS L +++Q E P F T NGGC LC P E
Sbjct: 266 RTGGKRKEILSALYSPMDIQVLSQ---ERQPFFHTRCEEDNGGCSHLCLLSPSE-----P 317
Query: 209 HYKCDCATGTPSASDPKKCTT-MDEYLVFSTRTEIRALHLD-PTLTAVPFKTVSNLTNVV 266
Y C C TG + + C +E L+ + RT++R + LD P T + + V ++ + +
Sbjct: 318 FYTCACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQ-VDDIRHAI 376
Query: 267 GVEFDYADDKILFT 280
+++D + + +T
Sbjct: 377 AIDYDPLEGYVYWT 390
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 26/277 (9%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P+ L+YW D+G+ P+I + LDG + +V+ + P L +D+Q +YW DAK D
Sbjct: 466 LHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTD 525
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I+ I+ +G R+ ++ LP+ G + +YW D R++ + K+ ++ + +
Sbjct: 526 KIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQL 585
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L GL+ + + +V NPC NGGC LCF P +C C G
Sbjct: 586 -PDLMGLKAVNVAKVVG-----TNPCADR-NGGCSHLCFFTPHA-------TRCGCPIGL 631
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDP--TLTAVPFKTVSNLTNVVGVEFDYADDK 276
SD K C + +LVF++R I + L+ A+P V + ++FD +++
Sbjct: 632 ELLSDMKTCIVPEAFLVFTSRAAIHRISLETNNNDVAIPLTGVKEAS---ALDFDVSNNH 688
Query: 277 ILFTQIRPWAKIAWIPTTNPSSASSNLTNVVGVEFDY 313
I W ++ + S++ +VV DY
Sbjct: 689 IY------WTDVSLKTISRAFMNGSSVEHVVEFGLDY 719
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 14/257 (5%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P +YW ++G PRI ++++DG+ ++V + DLTID +YW D +
Sbjct: 768 LDPTKGYIYWTEWGGKPRIVRAFMDGTNCMTLVDK-VGRANDLTIDYADQRLYWTDLDTN 826
Query: 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIR 159
+I+ + G R +I +LP+P G+ + +YW D NL ++ +A K + N TL I+
Sbjct: 827 MIESSNMLGQERVVIADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTL---IQ 883
Query: 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTP 219
L + DI +F Q D N C NG C QLC + P ++C CA+
Sbjct: 884 GHLDFVMDILVFHSSRQ--DGLNDCMHN-NGQCGQLCLAIPGG-------HRCGCASHYT 933
Query: 220 SASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILF 279
+ C+ +L+FS ++ I + D + + L NV +++D D I +
Sbjct: 934 LDPSSRNCSPPTTFLLFSQKSAISRMIPDDQHSPDLILPLHGLRNVKAIDYDPLDKFIYW 993
Query: 280 TQIRPWAKIAWIPTTNP 296
R K A T P
Sbjct: 994 VDGRQNIKRAKDDGTQP 1010
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 57 RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR- 115
+I ++ LDG++ + + G+ P L +D ++WVDA L I+ +G NR +
Sbjct: 1092 KIERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCDLSGANRLTLED 1151
Query: 116 RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVN 175
N+ P+G+ + +YW+DR + + + K T T I+ ++ L I + V+
Sbjct: 1152 ANIVQPLGLTILGKHLYWIDRQQQMIERVEK---TTGDKRTRIQGRVAHLTGIHAVEEVS 1208
Query: 176 QPPDENNPCFRTGNGGCEQLCFS 198
+PC R NGGC +C +
Sbjct: 1209 LEEFSAHPCARD-NGGCSHICIA 1230
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
+ PL +YW D + I ++YLDGS ++V+ I+ P + +D ++YW D D
Sbjct: 380 YDPLEGYVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTD 438
Query: 100 LIQKISYNGGNRQI-IRRNLPNPMGIAVH--KSDVYWVD 135
I+ NG +R+I + +L P IA+H +YW D
Sbjct: 439 RIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTD 477
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D I +++++GS +V G+ P + +D ++YW D + I+
Sbjct: 689 IYWTDV-SLKTISRAFMNGSSVEHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARL 747
Query: 107 NGGNRQIIR-RNLPNPMGIAVH--KSDVYWVD 135
+G RQ++ R+L NP +A+ K +YW +
Sbjct: 748 DGQFRQVLVWRDLDNPRSLALDPTKGYIYWTE 779
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRNLPNPMGIAVH--KSDV 131
G+ L D+ + +YW D L I + NG + ++ L P G+AV ++
Sbjct: 673 GVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVVEFGLDYPEGMAVDWMGKNL 732
Query: 132 YWVD 135
YW D
Sbjct: 733 YWAD 736
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS-----NGISMPRDLTIDMQTHDVYWV 94
+ PL + +YW+D Q I ++ DG++ + S N P DL+ID+ + ++W
Sbjct: 984 YDPLDKFIYWVDGRQ--NIKRAKDDGTQPFVLTSLSQGQNPDRQPHDLSIDIYSRTLFWT 1041
Query: 95 DAKLDLIQKISYNGGNRQII-RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKL 147
+ I +G ++ R + P I V+ Y N++ +A+K+
Sbjct: 1042 CEATNTINVHRLSGEAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQD--RAAKI 1093
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 113/237 (47%), Gaps = 15/237 (6%)
Query: 23 KKKKLKTSFRSANTTSP----FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISM 78
K K KT FR N + P P+ +YW D+G +I K L+G S+V+ I
Sbjct: 504 KGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 562
Query: 79 PRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVD 135
P +T+D+ + +YWVD+KL I I NGGNR+ I + L +P +AV + V+W D
Sbjct: 563 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 622
Query: 136 RNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT--GNGGCE 193
++ A++L +++ L + L D+ +F + QP N C RT NGGC+
Sbjct: 623 IINEAIFSANRLTGSDVNL---LAENLLSPEDMVLFHNLTQPRGV-NWCERTTLSNGGCQ 678
Query: 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPT 250
LC P P + + C C G A D + C T E V + T L + T
Sbjct: 679 YLCLPAPQINPHSP-KFTCACPDGMLLARDMRSCLTEAEAAVATQETSTVRLKVSST 734
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 47 LYWIDYGQYPRIGKSYLDG----SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
+YW D Q I + LD S + +++S I P L +D ++YW D+ L +
Sbjct: 441 IYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 499
Query: 103 KISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTNI 152
G R+ + R N P I V +YW D K L +I
Sbjct: 500 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 552
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 26 KLKTSFRSANTTSP---FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDL 82
+ KT FR + P +YW D+G +I K L+G S+V+ I P +
Sbjct: 494 RRKTLFRQEGSKPRAIVVDPAHGFMYWTDWGVPAKIEKGGLNGVDVYSLVTEDIQWPNGI 553
Query: 83 TIDMQTHDVYWVDAKLDLIQKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLR 139
T+D+ + +YWVD+KL I I NGGNR+ + + L +P +A+ + V+W D
Sbjct: 554 TLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLEDEQRLAHPFSLAIFEDKVFWTDVINE 613
Query: 140 TVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCF 197
++ A++L +++ L + L DI +F + QP N C +T NGGC+ LC
Sbjct: 614 AIFSANRLTGSDVHL---VAENLLSPEDIVLFHNLTQPRGV-NWCEKTALPNGGCQYLCL 669
Query: 198 SYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFK 257
P + + + C C GT A+D + C T + ++ + R A P LT P
Sbjct: 670 PAP-QINSHSPKFTCACPDGTLLAADMRSCRTEADVILSTQRASTAAR---PQLTGSPAG 725
Query: 258 TV 259
T
Sbjct: 726 TT 727
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 38/135 (28%)
Query: 182 NPCFRTGNGGCEQLCF----SYPVEFPQ-------------NKLH--------------- 209
N C R GNGGC CF + P+ N+
Sbjct: 303 NECMR-GNGGCSHTCFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGS 361
Query: 210 YKCDCATGTPSASDPKKCTTMDE--YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVG 267
YKC+C G + C +D YL F+ R E+R + LD + ++NL NVV
Sbjct: 362 YKCECRAGFQLDPHSQACKAVDSIAYLFFTNRHEVRKMTLDRSEYT---SLIANLKNVVA 418
Query: 268 VEFDYADDKILFTQI 282
++ + A ++I ++ +
Sbjct: 419 LDAEVASNRIYWSDL 433
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 115/241 (47%), Gaps = 20/241 (8%)
Query: 23 KKKKLKTSFRSANTTSP---FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMP 79
K K +T F+ A + P+ +YW D+G +I K L+G S+V+ I P
Sbjct: 504 KGVKRRTLFQEAGSRPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIHSLVTENIQWP 563
Query: 80 RDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN---LPNPMGIAVHKSDVYWVDR 136
+T+D+ + +YWVD+KL I I NGGNR+ I + L +P +A+++ VYW D
Sbjct: 564 NGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSLAIYEDKVYWTDV 623
Query: 137 NLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTG---NGGCE 193
++ A++L +++ L + L DI +F V QP N C T NGGC+
Sbjct: 624 INEAIFSANRLTGSDVNL---VAENLLSPEDIVLFHKVTQPRGV-NWCETTALLPNGGCQ 679
Query: 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKC-TTMDEYLVFSTRTEIRALHLDPTLT 252
LC P P + + C C G A D + C T +D L + +R P +T
Sbjct: 680 YLCLPAPQIGPHSP-KFTCACPDGMLLAKDMRSCLTEVDTVLTTQGTSAVR-----PVVT 733
Query: 253 A 253
A
Sbjct: 734 A 734
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE--YLVFSTRTEIRALHLDP 249
C QLC + + YKC+C G + C + YL+F+ R E+R + LD
Sbjct: 365 CSQLCVNL-------EGSYKCECQAGFHMDPHTRVCKAVGSIGYLLFTNRHEVRKMTLDR 417
Query: 250 TLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
+ + NL NVV ++ + +++I ++ +
Sbjct: 418 SEYT---SLLPNLKNVVALDTEVTNNRIYWSDL 447
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ +YW D+G +I K L+G S+V+ I P +T+D+ + +YWVD+KL I
Sbjct: 526 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSI 585
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I NGGNR+ I + L +P +A+++ V+W D ++ A++L +++ L +
Sbjct: 586 SSIDVNGGNRKTILEDEKQLAHPFSLAIYEDKVFWTDVINEAIFSANRLTGSDVNL---V 642
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
L DI +F + QP N C RT NGGC+ LC P P + + C C
Sbjct: 643 AENLLSPEDIVLFHNITQPRGV-NWCERTALPNGGCQYLCLPAPQINPHSP-KFTCACPD 700
Query: 217 GTPSASDPKKCTT 229
G A D + C T
Sbjct: 701 GMLLAKDMRSCLT 713
Score = 38.5 bits (88), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE--YLVFSTRTEIRALHLDP 249
C+QLC + + YKC+C G + C + YL+F+ R E+R + LD
Sbjct: 365 CDQLCVNL-------EGSYKCECRAGFHMDPHTRVCKAVGSVAYLLFTNRHEVRKMTLDR 417
Query: 250 TLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
+ + NL NVV ++ + A+++I ++ +
Sbjct: 418 SEYT---SLIPNLKNVVALDTEVANNRIYWSDL 447
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G +I KS L+G ++VS+ I P +T+D+ + +YWVD+KL +
Sbjct: 549 PLRGFMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQL 608
Query: 102 QKISYNGGNRQIIRRN---LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I ++GGNR+ + + L +P GIAV + V+W D ++ A++L I++ +
Sbjct: 609 SSIDFSGGNRKTLISSTDFLSHPFGIAVFEDKVFWTDLENEAIFSANRLNGLEISI---L 665
Query: 159 RTGLSGLRDIAIFDIVNQP--PDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
L+ DI IF + QP PD + NGGCE LC P + + Y C C
Sbjct: 666 AENLNNPHDIVIFHELKQPRAPDACELSVQP-NGGCEYLCLPAP-QISSHSPKYTCACPD 723
Query: 217 GTPSASDPKKC 227
D K+C
Sbjct: 724 TMWLGPDMKRC 734
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 47 LYWIDYGQYPRIGKSYLDGS----KWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
+YW D Y +I +Y+D + + ++ + P L +D +YW D+ I
Sbjct: 464 IYWCDL-SYRKIYSAYMDKASDPKEQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTIS 522
Query: 103 KISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
+ +GG R+ + RNL P IAV + +YW D
Sbjct: 523 VATVDGGRRRTLFSRNLSEPRAIAVDPLRGFMYWSD 558
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G +I K+ L+G+ ++VS+ I P +T+D+ + +YWVD+KL +
Sbjct: 582 PLRGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQL 641
Query: 102 QKISYNGGNRQIIRRN---LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I +NGGNR+++ + L +P G+AV + V+W D ++ A++L I + +
Sbjct: 642 SSIDFNGGNRKMLIFSTDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAI---L 698
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
L+ DI IF + Q P + C + NGGCE LC P + + Y C C
Sbjct: 699 AENLNNPHDIVIFHELKQ-PKAADACDLSAQPNGGCEYLCLPAP-QISSHSPKYTCACPD 756
Query: 217 GTPSASDPKKC 227
D K+C
Sbjct: 757 TMWLGPDMKRC 767
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P R +YW D+G +I K+ L+G +VS+ I P +T+D+ +YWVD+KL +
Sbjct: 563 PTRRFMYWSDWGDKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSL 622
Query: 102 QKISYNGGNRQIIRR---NLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I +NG NR+++ +L +P G+AV + V+W D ++ A++L+ +I++ +
Sbjct: 623 SCIDFNGSNREVLISSIDDLSHPFGLAVFEDRVFWTDLENEAIFSANRLSGLDISV---L 679
Query: 159 RTGLSGLRDIAIFDIVNQP--PD--ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDC 214
L+ DI +F + QP PD E +P NGGCE LC P P++ + C C
Sbjct: 680 AENLNNPHDIVVFHELKQPKAPDSCELSP---QPNGGCEYLCLPAPHISPRSP-KFTCAC 735
Query: 215 ATGTPSASDPKKC 227
D KKC
Sbjct: 736 PDNMWLGPDMKKC 748
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 191 GCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE--YLVFSTRTEIRALHLD 248
C Q+C +Y K YKC+C G + K C + + YL+F+ R E+R + L
Sbjct: 400 ACSQICINY-------KGDYKCECYEGYEMDTLSKNCKAVGKSPYLIFTNRHEVRKIDL- 451
Query: 249 PTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282
+ + + L NVV ++ + A ++I + +
Sbjct: 452 --VKRDYSRIIPMLKNVVALDVEVATNRIYWCDL 483
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTS----IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
+YW D Y +I +Y+D + T+ ++ + ++ P + ID ++YW D+ I
Sbjct: 478 IYWCDLF-YRKIYSAYIDKASDTAEQVILIDSQLNSPEGVAIDWVHKNIYWTDSGNKTIS 536
Query: 103 KISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVD 135
+ +G R+ + +L P IAV + +YW D
Sbjct: 537 VATADGSRRRTVFNSDLSEPRAIAVDPTRRFMYWSD 572
>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila melanogaster GN=yl
PE=1 SV=2
Length = 1984
Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P L++W D+G+ P IG++ +DGS+ IVS+ I P + +DM +YWVDAKL +
Sbjct: 526 PQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSV 585
Query: 102 QKISYNG-GNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
Q + +G G R ++ L +P G+A+ + +YW D ++V+ K + + + RT
Sbjct: 586 QTVRPDGTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRT 645
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
+ + I+ QP N+P N C LC + P+ H C C G
Sbjct: 646 ----IYAVHIYHPAKQP---NSP-HGCENATCSHLCL---LAEPEIGGH-SCACPDGMRL 693
Query: 221 ASDPKKCTTMDE 232
A D ++C M++
Sbjct: 694 APDHRRCMLMEK 705
Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 52 YGQYP-RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY---N 107
YGQ I + LDGS+ ++ S LT D +Y+VD + +++ISY
Sbjct: 1600 YGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLERISYRLKT 1659
Query: 108 GGNRQ---IIRRN--LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGL 162
G R+ +++++ L +P G++V++++ + V NL +V +A + A + I +
Sbjct: 1660 GPMRRPEIMLQKSNALMHPSGLSVYENNAFIV--NLGSV-EAVQCALYGSRICHKISINV 1716
Query: 163 SGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222
+DI + QP ++PC + C LC Q Y+C C G +
Sbjct: 1717 LNAQDIVVAGRSRQPQKASHPC---AHAHCHGLCL-------QADYGYECMC--GNRLVA 1764
Query: 223 DPKKC 227
+ ++C
Sbjct: 1765 EGERC 1769
Score = 40.0 bits (92), Expect = 0.032, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 47 LYWIDY-GQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105
+YW + + I K+ DGS ++++G+ P DL +D T ++Y+ D + I S
Sbjct: 443 IYWTNIQNEAESIVKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCS 502
Query: 106 YNGGNRQI-IRRNLPNPMGIAV--HKSDVYWVD 135
+G N + + +++ P +AV K ++W D
Sbjct: 503 NDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTD 535
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 9/228 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G+ +I K+ ++G +V+ I P +T+D+ +YW+D+KL ++
Sbjct: 565 PLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 102 QKISYNGGNRQIIRRNLP---NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ NG +R+I+ ++L +P+ + + + VYW+D VY A+K + + +
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELAT---L 681
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L+ +DI ++ + QP +N NGGCE LC P + ++ Y C C G
Sbjct: 682 VNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCLPAP-QINEHSPKYTCSCPNGY 740
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVV 266
+ ++C + + +S + + PT VP + N+T V
Sbjct: 741 HLEENGRECQSTATTVTYSETKDTNTTEISPTSGLVPGEI--NVTTAV 786
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 9 SLIWAIRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKW 68
S++ + +A K+K L S P+ +YW D+G +I K L+G
Sbjct: 464 SILGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDV 523
Query: 69 TSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII---RRNLPNPMGIA 125
S+V+ I P +T+D+ +YWVD+KL I I NGGNR+ + + L +P +A
Sbjct: 524 YSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTVLEDKTKLAHPFSLA 583
Query: 126 VHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCF 185
+ + V+W D ++ A++L ++I L + L DI +F + QP N C
Sbjct: 584 IFEDKVFWTDIINEAIFSANRLTGSDIHL---MAENLLSPEDIVLFHNLTQPRGV-NWCE 639
Query: 186 RTG--NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE 232
RT NGGC+ LC P P++ + C C G A D + C T E
Sbjct: 640 RTALQNGGCQYLCLPAPQINPRSP-KFTCACPDGMLLAKDMRSCLTETE 687
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 47 LYWIDYGQYPRIGKSYLDG----SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102
+YW D Q +I + +D S + +I+ + P L +D ++YW D+ L +
Sbjct: 412 IYWSDLSQR-KIYSTQIDRAPSFSSYDTIIGEDLQAPDGLAVDWIHSNIYWTDSILGTVS 470
Query: 103 KISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKAS--------KLASTN 151
G R+ + + P I V +YW D K L + +
Sbjct: 471 VADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDVYSLVTED 530
Query: 152 ITLPTPIRTGLSGLR 166
I P I LSG R
Sbjct: 531 IQWPNGITLDLSGGR 545
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 10/191 (5%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ +YW D+G +I K L+G S+V+ I P +T+D+ + +YWVD+KL I
Sbjct: 526 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSI 585
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I NGG R+ I + L +P +A+++ VYW D ++ A++L +++ L +
Sbjct: 586 SSIDVNGGGRKTILEDEKQLAHPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNL---V 642
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRT--GNGGCEQLCFSYPVEFPQNKLHYKCDCAT 216
L DI +F V QP N C T NGGC+ +C P + + + C C
Sbjct: 643 AKNLMSPEDIVLFHNVTQPRGV-NWCEATVLPNGGCQYMCLPAP-QISAHSPKFTCACPD 700
Query: 217 GTPSASDPKKC 227
G A D + C
Sbjct: 701 GMLLAKDMRSC 711
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G+ +I K+ ++G +V+ I P +T+D+ +YW+D+KL ++
Sbjct: 565 PLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHML 624
Query: 102 QKISYNGGNRQIIRRNLP---NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ NG +R+I+ ++L +P+ + + + VYW+D VY A+K + + +
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELAT---L 681
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L+ +DI ++ + QP +N NGGCE LC P + + Y C C +G
Sbjct: 682 VNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCLPAP-QINDHSPKYTCSCPSGY 740
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVP 255
+ + C + + +S + + T VP
Sbjct: 741 NVEENGRDCQSTATTVTYSETKDTNTTEISATSGLVP 777
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G+ +I K+ ++G +V+ I P +T+D+ +YW+D+KL ++
Sbjct: 565 PLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 102 QKISYNGGNRQIIRRNLP---NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ NG +R+I+ ++L +P+ + + + VYW+D VY A+K + + +
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELAT---L 681
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L+ +DI I+ + QP +N NGGCE LC P + + Y C C G
Sbjct: 682 VNNLNDAQDIIIYHELVQPSGKNWCEEDMENGGCEYLCLPAP-QINDHSPKYTCSCPNGY 740
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVP 255
+ ++C + + +S ++ + T VP
Sbjct: 741 NLEENGRECQSTSTPVTYSETKDVNTTDILRTSGLVP 777
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +YW D+G+ +I K+ ++G +V+ I P +T+D+ +YW+D+KL ++
Sbjct: 565 PLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHML 624
Query: 102 QKISYNGGNRQIIRRNLP---NPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
+ NG +R+I+ ++L +P+ + + + VYW+D VY A+K + + +
Sbjct: 625 SSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELAT---L 681
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGT 218
L+ +DI ++ + QP +N NGGCE LC P + + Y C C G
Sbjct: 682 VNNLNDAQDIIVYHELVQPSGKNWCEDDMENGGCEYLCLPAP-QINDHSPKYTCSCPNGY 740
Query: 219 PSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVP 255
+ ++C + + +S +I + T VP
Sbjct: 741 NLEENGRECQSTSTPVTYSETKDINTTDILRTSGLVP 777
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 82/131 (62%), Gaps = 6/131 (4%)
Query: 42 PLPRLLYWIDYGQY-PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
P +++W D+G P I +SY+DGS +VS + P +++D Q +YW DA LD
Sbjct: 885 PQEGVMFWTDWGDLKPGIYRSYMDGSAAYRLVSEDVKWPNGISVDSQW--IYWTDAYLDC 942
Query: 101 IQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
I++I+++G R +I +LP+P IAV K+++YW D + ++++ASK + + + + + +
Sbjct: 943 IERITFSGQQRSVILDSLPHPYAIAVFKNEIYWDDWSQLSIFRASKHSRSQVEI---LAS 999
Query: 161 GLSGLRDIAIF 171
L+GL D+ +F
Sbjct: 1000 QLTGLMDMKVF 1010
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +I Y I + L + +G+ L D + + +YW D LD I
Sbjct: 753 PLAEENEFILYAMRKSIYRYDLASGATEQLPLSGLRAAVALDFDYERNCLYWSDLALDTI 812
Query: 102 QKISYNG--GNRQIIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTNITL 154
Q++ NG G II L +A +YWVD + + A+ +T+
Sbjct: 813 QRLCLNGSTGQEVIINSGLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTI 869
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 22 KKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRD 81
KK+K L S + PL +YW D+G+ +I K+ ++G +V+ I P
Sbjct: 565 KKRKVLFLSELREPASIAVDPLSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNG 624
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRN---LPNPMGIAVHKSDVYWVDRNL 138
+ +D+ +YW+D+KL ++ + NG +R+++ ++ LP+P+ + + + V+W+D
Sbjct: 625 IALDLVKSRLYWLDSKLHMLSSVDLNGQDRRLVLKSHMFLPHPLALTIFEDRVFWIDGEN 684
Query: 139 RTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFS 198
VY A+K T L T + L+ +DI ++ + QP N NGGC LC
Sbjct: 685 EAVYGANKF--TGAELVTLVNN-LNDAQDIIVYHELVQPSGRNWCEENMVNGGCSYLCLP 741
Query: 199 YPVEFPQNKLHYKCDCATGTPSASDPKKC 227
P + ++ Y C C G D +C
Sbjct: 742 AP-QINEHSPKYTCTCPAGYFLQEDGLRC 769
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 9 SLIWAIRLALRL--LKKKKKLKTSFRSANTTSPFSPL-PRLLYWIDYGQYPRIGKSYLDG 65
LI+ R +R L++K+ ++ + NT + + + + LYW D+ Q S
Sbjct: 460 CLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSASIDTR 519
Query: 66 SK---WTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII-RRNLPNP 121
K T I+ N I P + +D ++YW D+ I S NG R+++ L P
Sbjct: 520 DKVGTHTRILDN-IHSPAGIAVDWIYKNIYWTDSSAKTISVASLNGKKRKVLFLSELREP 578
Query: 122 MGIAVH--KSDVYWVD 135
IAV +YW D
Sbjct: 579 ASIAVDPLSGFMYWSD 594
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 42 PLPRLLYWIDYGQY-PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
P +++W D+G P I +S +DGS +VS + P +++D Q +YW DA L+
Sbjct: 885 PQEGVMFWTDWGDLKPGIYRSNMDGSAAYHLVSEDVKWPNGISVDDQW--IYWTDAYLEC 942
Query: 101 IQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
I++I+++G R +I NLP+P IAV K+++YW D + ++++ASK + + + + +
Sbjct: 943 IERITFSGQQRSVILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEI---LAN 999
Query: 161 GLSGLRDIAIF 171
L+GL D+ IF
Sbjct: 1000 QLTGLMDMKIF 1010
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG--GNRQIIRRNLPNPMGIAVH--KSD 130
G+ L D + + +YW D LD+IQ++ NG G II L +A
Sbjct: 786 GLRAAVALDFDYEHNCLYWSDLALDVIQRLCLNGSTGQEVIINSGLETVEALAFEPLSQL 845
Query: 131 VYWVDRNLRTVYKASKLASTNITL 154
+YWVD + + A+ +T+
Sbjct: 846 LYWVDAGFKKIEVANPDGDFRLTI 869
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2 SV=1
Length = 2213
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 42 PLPRLLYWIDYGQY-PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
P +++W D+G P I +S +DGS +VS + P +++D Q +YW DA LD
Sbjct: 884 PQEGIMFWTDWGDLKPGIYRSNMDGSAAYRLVSEDVKWPNGISVDDQW--IYWTDAYLDC 941
Query: 101 IQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
I++I+++G R +I LP+P IAV K+++YW D + ++++ASK + + + + + +
Sbjct: 942 IERITFSGQQRSVILDRLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEI---LAS 998
Query: 161 GLSGLRDIAIF 171
L+GL D+ IF
Sbjct: 999 QLTGLMDMKIF 1009
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
PL +I Y I + L + G+ L D + + +YW D LD+I
Sbjct: 752 PLAEENEFILYATRKSIHRYDLASGTTEQLPLTGLRAAVALDFDYEHNCLYWSDLALDVI 811
Query: 102 QKISYNG--GNRQIIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTNITL 154
Q++ NG G II +L +A +YWVD + + A+ +T+
Sbjct: 812 QRLCLNGSTGQEVIINSDLETVEALAFEPLSQLLYWVDAGFKKIEVANPDGDFRLTV 868
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P +YW D+G +I K L+G +V+ I P +T+D+ +YWVD+KL +
Sbjct: 524 PSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSL 583
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I G NR+ + +L +P G+ + + V+W D ++ A++L NI +
Sbjct: 584 SCIDVTGENRRTVISDETHLAHPFGLTIFEDLVFWTDIENEAIFSANRLTGRNI---MKV 640
Query: 159 RTGLSGLRDIAIFDIVNQPPDEN-NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATG 217
L DI ++ + QP EN GNGGCE LC P + C C G
Sbjct: 641 AEDLLSPEDIVLYHNLRQPKAENWCEAHHLGNGGCEYLCLPAP-HITARSPKFTCACPDG 699
Query: 218 TPSASDPKKC 227
D + C
Sbjct: 700 MHLGDDMRSC 709
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 47 LYWIDYGQ---YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103
+YW D Q Y + + S +++SN I P + +D ++YW D+K I
Sbjct: 439 IYWSDLTQRKIYSASMEKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISV 498
Query: 104 ISYNGGNRQI-IRRNLPNPMGIAVHKSD--VYWVDRNL 138
+ G R+ +L P I V S +YW D L
Sbjct: 499 ANTEGSKRRTPPSDDLEKPRDIVVDPSQGFMYWTDWGL 536
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 57 RIGKSYLDGSKWTSIVSNGISMPR-----DLTIDMQTHDVYWVDAKLDLI-----QKISY 106
+ K LD S++TS++ PR L +++ ++ +YW D I +K
Sbjct: 406 EVRKMTLDRSEYTSVI------PRLKNVVALDMEIASNKIYWSDLTQRKIYSASMEKADN 459
Query: 107 NGGNRQIIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSG 164
+ +I + P GIAV ++YW D T+ A+ S T P+ L
Sbjct: 460 TSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRRTPPS---DDLEK 516
Query: 165 LRDIAI 170
RDI +
Sbjct: 517 PRDIVV 522
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 42 PLPRLLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
P L++W D+G P I +S +DGS IVS G+ P +++D H +YW +A +D
Sbjct: 792 PREGLMFWTDWGDSRPGIYRSDMDGSLAACIVSEGVRWPNGISVD--DHWIYWTEAYMDR 849
Query: 101 IQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
I+++ +NG R +I +LP+P IAV K+++YW D + ++++ASK + + + +
Sbjct: 850 IERVDFNGLQRSVILDSLPHPYAIAVFKNEIYWNDWSQLSIFRASKNSGSRMET---LVG 906
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVE---FPQNKLHYKCDCATG 217
L G+ D+ IF +R G + C ++P P++ C C G
Sbjct: 907 RLYGIMDMKIF-------------YRGKTTG-QNACIAHPCSLLCLPKSNNGRSCKCPEG 952
Query: 218 TPSASDP 224
S P
Sbjct: 953 VSSTVLP 959
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ--IIRRNLPNPMGIAVH--KSDVYWVDRN 137
L D + + +YW D LD+IQ++ NG + Q II L +A +YWV+
Sbjct: 700 LDFDYEHNCLYWADVTLDIIQRLCLNGSSGQEIIISTGLETVEALAFEPLSQLLYWVNAG 759
Query: 138 LRTVYKASKLASTNITL 154
+ + A+ +T+
Sbjct: 760 IPKIEVANPDGDLRLTV 776
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P +YW D+G +I K L+G +V++ I P +T+D+ + +YWVD+KL +
Sbjct: 524 PSQGFMYWTDWGLPAKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSL 583
Query: 102 QKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I G NR+ + +L +P G+ + + V+W D ++ A +L NI +
Sbjct: 584 SCIDITGENRRTVLSDETHLAHPFGLTIFEDLVFWTDIENEAIFSAKRLTGENI---MKV 640
Query: 159 RTGLSGLRDIAIFDIVNQPPDEN-NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATG 217
L DI ++ + QP EN GNGGC LC P + C C G
Sbjct: 641 AEHLLSPEDIVLYHNLRQPKAENWCESHHLGNGGCGYLCLPAP-HVNARSPKFTCACPDG 699
Query: 218 TPSASDPKKC 227
+D + C
Sbjct: 700 MHLGTDMRNC 709
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 7 LASLIWAIRLALRLLKKKKKLKTSF--RSANTTS-PFSPLPRLLYWIDYGQYPRIGKSYL 63
+A L + R +R + + TSF R N + +YW D Q +I + +
Sbjct: 396 VAYLFFTNRHEVRKMTLDRSEYTSFIPRLKNVVALDMEIASNKIYWSDLTQR-KIYSASM 454
Query: 64 DGSKWTS----IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNL 118
D + TS ++SN I P + +D ++YW D+K I + G R+ + +L
Sbjct: 455 DKADNTSHHETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFTDDL 514
Query: 119 PNPMGIAVHKSD--VYWVDRNL 138
P I V S +YW D L
Sbjct: 515 AKPRDIVVDPSQGFMYWTDWGL 536
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 27/129 (20%)
Query: 57 RIGKSYLDGSKWTSIVSNGISMPR-----DLTIDMQTHDVYWVD--------AKLDLIQK 103
+ K LD S++TS + PR L +++ ++ +YW D A +D
Sbjct: 406 EVRKMTLDRSEYTSFI------PRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADN 459
Query: 104 ISYNGGNRQIIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTG 161
S++ +I + P GIAV ++YW D T+ A+ S TL T
Sbjct: 460 TSHH---ETVISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTLFT---DD 513
Query: 162 LSGLRDIAI 170
L+ RDI +
Sbjct: 514 LAKPRDIVV 522
>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF PE=1 SV=2
Length = 1214
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ + L+W D G PRI S L G I S+ + P +TID T +YW DAK +I
Sbjct: 607 PVAKRLFWTDMGTNPRIESSSLQGIGRQVIASSDLVWPSGITIDYLTDKLYWCDAKQSVI 666
Query: 102 QKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ + +G RQ + +N + +P +AV + V++ D + +V + +K N +R
Sbjct: 667 EMSNLDGSRRQRLAQNDVGHPFAVAVFEDHVWFSDWTMPSVIRVNKRTGKN-----RVRL 721
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
S L+ ++ + NPC NGGCE +C ++ +C C G
Sbjct: 722 RGSMLKPSSLVVVHPLAKPGTNPCLHQ-NGGCEHIC-------KESFGTAQCLCHEGFLK 773
Query: 221 ASDPKKCTTMDEYLVFSTR 239
A D K C ++ + + R
Sbjct: 774 APDGKMCLALNGQEILAGR 792
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRR 116
I ++ +DGS+ + + +P L ID YW D LI+ NG R+ II+
Sbjct: 536 IERANMDGSQRERLFEEAVDVPEGLAIDWIGRKFYWTDRGRSLIEGSDLNGKYREIIIKE 595
Query: 117 NLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL--------ASTNITLPTPI 158
++ P GIAVH ++W D ++S L AS+++ P+ I
Sbjct: 596 DISQPRGIAVHPVAKRLFWTDMGTNPRIESSSLQGIGRQVIASSDLVWPSGI 647
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMD--EYLVFSTRTE 241
C NGGC QLC P + + ++C C G D K C +L+F+ +
Sbjct: 439 CSSPDNGGCSQLC------LPLSPVTWECGCFPGYDLQLDKKSCRASGPPPFLLFANSQD 492
Query: 242 IRALHLDPTLTAVPFKTVSN--LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 295
IR +H D T ++T+ N + V+ ++ D ++K+ F + WI N
Sbjct: 493 IRHMHFDGT----DYETLLNQQIGMVLALDHDPVENKVYFAH----TALKWIERAN 540
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 62 YLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPN 120
+ DG+ + ++++ I M L D + VY+ L I++ + +G R+ + +
Sbjct: 497 HFDGTDYETLLNQQIGMVLALDHDPVENKVYFAHTALKWIERANMDGSQRERLFEEAVDV 556
Query: 121 PMGIAVH--KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQ 176
P G+A+ YW DR R++ + S L + I+ +S R IA+ + +
Sbjct: 557 PEGLAIDWIGRKFYWTDRG-RSLIEGSDLNGKYREI--IIKEDISQPRGIAVHPVAKR 611
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 63 LDGSKWTSIVSN-GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNP 121
L+G+ +V++ GIS+ D + + +YWVD + L+Q++ NG ++ + N
Sbjct: 61 LEGTNHEQLVADAGISVLMDFHYNEER--IYWVDLERQLLQRVFLNGTRQEKVCNLEKNV 118
Query: 122 MGIAVH--KSDVYWVDRNLRTV 141
G+A++ ++ W ++ T+
Sbjct: 119 SGMAINWINEELIWSNQQEGTI 140
>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis catus GN=EGF PE=2 SV=1
Length = 1210
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ + L+W D G PRI S L G I S+ + P +TID T +YW DAK +I
Sbjct: 604 PMAKRLFWTDMGINPRIESSSLQGIGRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVI 663
Query: 102 QKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ + +G RQ + +N + +P IAV + V++ D + +V + +K N +R
Sbjct: 664 EMANLDGSKRQRLAQNDVGHPFAIAVFEDHVWFSDWTMPSVIRVNKRTGKN-----RVRL 718
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
S L+ ++ + ++PC NGGCE +C + +C C G
Sbjct: 719 RGSMLKPSSLVVVHPLAKPGSDPCLHQ-NGGCEHIC-------KERFGSAQCLCREGFVK 770
Query: 221 ASDPKKCTTMDEYLV 235
A D K C ++ + +
Sbjct: 771 APDGKMCLALNGHQI 785
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRR 116
I ++ +DGS+ ++ + +P L ID YW D LI+ NG +R+ II+
Sbjct: 533 IERANMDGSQRERLIEEAVDVPEGLAIDWIDRKFYWTDRGKALIEGSDLNGKHREIIIKE 592
Query: 117 NLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL--------ASTNITLPTPI 158
+ P GIAVH ++W D + ++S L AS+++ P+ I
Sbjct: 593 EVSQPRGIAVHPMAKRLFWTDMGINPRIESSSLQGIGRRVIASSDLVWPSGI 644
Score = 38.5 bits (88), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM--DEYLVFSTRTE 241
C NGGC QLC P + + ++C C G D K C +L+F+ +
Sbjct: 436 CSSPDNGGCSQLC------LPLSPVSWECGCFPGYDLQLDKKSCAASGPQPFLLFANSQD 489
Query: 242 IRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 295
IR + D T + V ++ D ++KI F + WI N
Sbjct: 490 IRHVRFDGTDYGSLLS--QQMGMVFALDHDPVENKIYFAH----TALKWIERAN 537
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 63 LDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRRNLPNP 121
DG+ + S++S + M L D + +Y+ L I++ + +G R+ +I + P
Sbjct: 495 FDGTDYGSLLSQQMGMVFALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEAVDVP 554
Query: 122 MGIAVHKSD--VYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQP 177
G+A+ D YW DR + + + S L + R+I I + V+QP
Sbjct: 555 EGLAIDWIDRKFYWTDRG-KALIEGSDLNGKH--------------REIIIKEEVSQP 597
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 63 LDGSKWTSIVSN-GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNP 121
LDG+ + +V++ G+S+ D + +YWVD + L+Q++ NG ++ + N
Sbjct: 61 LDGTNYEQLVADAGVSVIMDFHYYKER--LYWVDLERQLLQRVFLNGTRQETVCNIEKNV 118
Query: 122 MGIAVHKSDVYWVDRNL 138
G+A++ W++ L
Sbjct: 119 SGMAIN-----WINEEL 130
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 39/244 (15%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P +YW D+G +P I + +DG V+ + P+ +TID +YWVDAK +I
Sbjct: 414 PTQGKMYWSDWGTFPHIAVAGMDGKNVRIFVNVKLEWPKSVTIDYPNERLYWVDAKSKMI 473
Query: 102 QKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVD---RNLRTVYKAS----KLASTNIT 153
+ + +G +R+I+ + + P + V ++ +YW D ++T K + K+ N
Sbjct: 474 ESVRLDGTDRRIVLHDIIQEPFSMTVFQNKLYWSDWESNGIQTCNKFTGKDWKILIRNHN 533
Query: 154 LPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCD 213
P + S ++ P+ +NPC+ + C QLC QNK Y C
Sbjct: 534 KPYSVHMDHSAIK-----------PNIDNPCY---SNPCSQLCM-----LNQNK-GYTCG 573
Query: 214 CATGTPSASDPKKCTTMDE---YLVFSTRTEIRALH--------LDPTLTAVPFKTVSNL 262
C +D C + + L+ R I H + +L + ++ +NL
Sbjct: 574 CTLDKKLNADKHTCQDVKKNQHLLIIQGRKFINYYHEFLGKPKVMTLSLQHMSQQSYNNL 633
Query: 263 TNVV 266
N++
Sbjct: 634 VNII 637
Score = 37.7 bits (86), Expect = 0.14, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM--DEYLVFSTRTEIRALHL 247
G C+Q C + P Y C C +D + C + LVFSTRT I +H+
Sbjct: 252 GICDQDCMNVPGS-------YACTCQREYYLENDKRTCKARAGEATLVFSTRTSILGMHV 304
Query: 248 DPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRP--WAKIAWIPTTNPSS-----AS 300
D + F +NL + VGV D + ++ + + I T +P + +
Sbjct: 305 D---SEKFFSLATNLNHAVGVAM--YGDYVYWSNLEENGYNTIVKKRTYHPQAPNEVIVT 359
Query: 301 SNLTNVVGVEFDYADDKILF 320
+ L + G++ D+ I F
Sbjct: 360 TGLALITGIDVDWITKNIYF 379
Score = 33.5 bits (75), Expect = 2.7, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 45 RLLYWIDY---GQYP--RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
R L+W + +P +I ++ + G+ I+++ + R +TID +YW D
Sbjct: 1471 RWLFWAEISLEADHPTSKICRTDMTGAD-MKIIASDLGFVRGMTIDHVKSKLYWSDDFYK 1529
Query: 100 LIQKISYNGGNRQII-RRNLPNPMGIAVHKSDVYWVDRN 137
++ +++G R+++ N+ + + I++ + +Y++ +
Sbjct: 1530 TVESSNFDGSQRKVVLTLNMNHALSISIFEQSLYFLSSD 1568
Score = 33.1 bits (74), Expect = 3.9, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 19/140 (13%)
Query: 105 SYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDR-------NLRTVYKASKLASTNITLPTP 157
S++ + +I+R L +P + V +++W++ N RT K +++
Sbjct: 799 SHSAQDTRILRSGLKSPHSLTVAGDNLFWIESQNKLYSTNFRTASVKQKTVEFDLSKLND 858
Query: 158 IRTGLSG-----LRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKC 212
T L G RD + + + C + NG C +C P + C
Sbjct: 859 NMTSLPGHLTPYSRDAQYVVTLRKDDIPKHDC-QKNNGNCSHVC------LPSLITSFIC 911
Query: 213 DCATGTPSASDPKKCTTMDE 232
C G ++D + C + E
Sbjct: 912 ACPPGMELSNDNRTCISHHE 931
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus GN=Egf PE=1 SV=2
Length = 1133
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 16/190 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P R L+W D G PRI S L GS T I S+ + P + ID T +YW D KL +I
Sbjct: 609 PKARRLFWTDTGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVI 668
Query: 102 QKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ +G R+ + +N + +P +AV + V++ D + +V + +K N +R
Sbjct: 669 EMADLDGSKRRRLTQNDVGHPFSLAVFEDHVWFSDWAIPSVIRVNKRTGQN-----RVRL 723
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLH-YKCDCATGTP 219
S L+ ++ + +PC NGGCE +C Q L +C C G
Sbjct: 724 RGSMLKPSSLVVVHPLAKPGADPCLHR-NGGCEHIC--------QESLGTAQCLCREGFV 774
Query: 220 SASDPKKCTT 229
A D K C T
Sbjct: 775 KAPDGKMCLT 784
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRR 116
I ++ LDGS+ ++ G+ P L +D +YW D+ +I+ +G + Q II+
Sbjct: 538 IERANLDGSQRERRITEGVDTPEGLAVDWIGRRIYWTDSGKSVIEGSDLSGKHHQIIIKE 597
Query: 117 NLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTNITL 154
++ P GIAVH ++W D + ++S L ++ TL
Sbjct: 598 SISRPRGIAVHPKARRLFWTDTGMSPRIESSSLQGSDRTL 637
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM---DEYLVFSTRT 240
C + NGGC Q+C P + ++CDC G D K C +L+F+
Sbjct: 440 CSFSDNGGCSQIC------LPLSLASWECDCFPGYDLQLDRKSCAASMGPQPFLLFANSQ 493
Query: 241 EIRALHLDPTLTAVPFKTV--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 295
+IR +H D T +KT+ + V +++D + KI F Q + WI N
Sbjct: 494 DIRHMHFDGT----DYKTLLSRQMGMVFALDYDPVESKIYFAQ----TALKWIERAN 542
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN-GISMPRDLTIDMQTHD 90
RS TT + PR L ++ RI DG+ +V + G+S+ D +
Sbjct: 34 RSGTTTYAAAGPPRFLIFLQGNSIFRINT---DGTNHQQLVVDAGVSVVMDF--HYKEER 88
Query: 91 VYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRN-LRT 140
+YWVD + L+Q++ +NG ++ + + N G+A++ W+D LRT
Sbjct: 89 LYWVDLERQLLQRVFFNGSGQETVCKVDKNVSGLAIN-----WIDGEILRT 134
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWV 94
+ + P P LL+ I + DG+ + +++S + M L D +Y+
Sbjct: 476 SCAASMGPQPFLLF----ANSQDIRHMHFDGTDYKTLLSRQMGMVFALDYDPVESKIYFA 531
Query: 95 DAKLDLIQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRNLRTVYKASKLASTN 151
L I++ + +G R+ I + P G+AV +YW D ++V + S L+ +
Sbjct: 532 QTALKWIERANLDGSQRERRITEGVDTPEGLAVDWIGRRIYWTDSG-KSVIEGSDLSGKH 590
Query: 152 ITLPTPIRTGLSGLRDIAIF 171
+ I+ +S R IA+
Sbjct: 591 HQI--IIKESISRPRGIAVH 608
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ + L+W D G PRI S L G I S+ + P +TID T +YW D KL +I
Sbjct: 609 PMAKRLFWTDMGINPRIESSSLQGIGRLVIASSDLVWPSGITIDYVTDKLYWCDTKLSVI 668
Query: 102 QKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ + +G RQ + +N + +P +AV + V++ D + ++ + K N +R
Sbjct: 669 EMANLDGSKRQRLAQNDVGHPFAMAVFEDHVWFSDWTMPSIIRVDKRTGKNRVR---LRG 725
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS 220
+ + + + +P + PC NGGCE +C + +C C G
Sbjct: 726 SMLKPSSLVVVHPLAKPGAQ--PCLYQ-NGGCEHIC-------KERFGTAQCLCREGFVK 775
Query: 221 ASDPKKCTTMDEYLVFSTRTE 241
A D K C ++ + + + +E
Sbjct: 776 APDGKMCLALNGHQIPAVGSE 796
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-IIRR 116
I ++ +DGS+ ++ G+ +P L ID YW D+ LI+ NG +R+ II+
Sbjct: 538 IERANMDGSQRERLIEEGVDVPEGLAIDWIDRKFYWTDSGKSLIEGSDLNGKHREIIIKE 597
Query: 117 NLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL--------ASTNITLPTPI 158
++ P GIAVH ++W D + ++S L AS+++ P+ I
Sbjct: 598 DISQPRGIAVHPMAKRLFWTDMGINPRIESSSLQGIGRLVIASSDLVWPSGI 649
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM--DEYLVFSTRTE 241
C NGGC QLC P + + ++C C G D + C +L+F+ +
Sbjct: 441 CSSPDNGGCSQLC------LPLSPVSWECGCFPGYDLQLDKQSCAASGPQPFLLFANSQD 494
Query: 242 IRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 295
IR +H D T + V ++ D ++KI F + WI N
Sbjct: 495 IRHMHFDGTDYGTLLS--QQMGMVFALDHDPVENKIYFAH----TALKWIERAN 542
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 63 LDGSKWTSIVSN-GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNP 121
L+G+ +V++ G+S+ D + + +YWVD + L+Q++ NG ++ + N
Sbjct: 61 LEGTNHEQLVADAGVSVIMDFHYNKER--IYWVDPERQLLQRVFLNGTRQERVCNIEKNV 118
Query: 122 MGIAVHKSDVYWVDRNL 138
G+A++ W++ L
Sbjct: 119 SGMAIN-----WINEEL 130
>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2
Length = 1207
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P+ + L+W D G PRI S L G I S+ + P +TID T +YW DAK +I
Sbjct: 607 PMAKRLFWTDTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVI 666
Query: 102 QKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ + +G R+ + +N + +P +AV + V++ D + +V + +K + +R
Sbjct: 667 EMANLDGSKRRRLTQNDVGHPFAVAVFEDYVWFSDWAMPSVMRVNKRTGKD-----RVRL 721
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYK-CDCATGTP 219
S L+ ++ + +PC NGGCE +C + +L C C G
Sbjct: 722 QGSMLKPSSLVVVHPLAKPGADPCLYQ-NGGCEHIC--------KKRLGTAWCSCREGFM 772
Query: 220 SASDPKKCTTMDEYLVFS 237
ASD K C +D + + +
Sbjct: 773 KASDGKTCLALDGHQLLA 790
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII-RR 116
I ++ +DGS+ ++ G+ +P L +D YW D LI + NG +II +
Sbjct: 536 IERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKE 595
Query: 117 NLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL--------ASTNITLPTPI 158
N+ P GIAVH ++W D + ++S L AS+++ P+ I
Sbjct: 596 NISQPRGIAVHPMAKRLFWTDTGINPRIESSSLQGLGRLVIASSDLIWPSGI 647
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM--DEYLVFSTRTE 241
C NGGC QLC P + + ++CDC G D K C +L+F+ +
Sbjct: 439 CSSPDNGGCSQLC------VPLSPVSWECDCFPGYDLQLDEKSCAASGPQPFLLFANSQD 492
Query: 242 IRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 295
IR +H D T + V ++ D ++KI F + WI N
Sbjct: 493 IRHMHFDGTDYGTLLS--QQMGMVYALDHDPVENKIYFAH----TALKWIERAN 540
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 41 SPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
P P LL+ I + DG+ + +++S + M L D + +Y+ L
Sbjct: 480 GPQPFLLF----ANSQDIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKW 535
Query: 101 IQKISYNGGNRQ-IIRRNLPNPMGIAVH--KSDVYWVDRN 137
I++ + +G R+ +I + P G+AV YW DR
Sbjct: 536 IERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTDRG 575
>sp|P01131|LDLR_BOVIN Low-density lipoprotein receptor (Fragment) OS=Bos taurus GN=LDLR
PE=2 SV=1
Length = 264
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 96 AKLDLIQKISYNGGNRQII---RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNI 152
+KL I I NGGNR+ + ++ L +P +A+ + V+W D ++ A++L ++I
Sbjct: 1 SKLHSISSIDVNGGNRKTVLEDKKKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDI 60
Query: 153 TLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTG--NGGCEQLCFSYPVEFPQNKLHY 210
+L + L DI +F + QP N C RT NGGC+ LC P P++ +
Sbjct: 61 SL---MAENLLSPEDIVLFHNLTQPRGV-NWCERTALRNGGCQYLCLPAPQINPRSP-KF 115
Query: 211 KCDCATGTPSASDPKKCTTMDEYLVFSTR--TEIRALHLDPTLTAVP 255
C C G A D + C T E V +TR + + + + P TA P
Sbjct: 116 TCACPDGMLLAKDMRSCLTESESAV-TTRGPSTVSSTAVGPKRTASP 161
>sp|P01132|EGF_MOUSE Pro-epidermal growth factor OS=Mus musculus GN=Egf PE=1 SV=2
Length = 1217
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 42 PLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101
P R L+W D G PRI + L GS I S+ + P +TID T +YW D K +I
Sbjct: 613 PRARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVI 672
Query: 102 QKISYNGGN-RQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRT 160
+ + +G R++I+ ++ +P +AV + ++ D + +V + +K N +R
Sbjct: 673 EMANLDGSKRRRLIQNDVGHPFSLAVFEDHLWVSDWAIPSVIRVNKRTGQN-----RVRL 727
Query: 161 GLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLH-YKCDCATGTP 219
S L+ ++ + +PC NGGCE +C Q L +C C G
Sbjct: 728 QGSMLKPSSLVVVHPLAKPGADPCLYR-NGGCEHIC--------QESLGTARCLCREGFV 778
Query: 220 SASDPKKCTTMD 231
A D K C D
Sbjct: 779 KAWDGKMCLPQD 790
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 20/146 (13%)
Query: 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM--DEYLVFSTRTE 241
C NGGC Q+C P ++CDC G SD K C L+F+ +
Sbjct: 445 CSSPDNGGCSQIC------LPLRPGSWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQD 498
Query: 242 IRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSA-- 299
IR +H D T V + V +++D + KI F Q + WI N +
Sbjct: 499 IRHMHFDGTDYKVLLS--RQMGMVFALDYDPVESKIYFAQ----TALKWIERANMDGSQR 552
Query: 300 ----SSNLTNVVGVEFDYADDKILFT 321
+ + + G+ D+ +I +T
Sbjct: 553 ERLITEGVDTLEGLALDWIGRRIYWT 578
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 58 IGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRR 116
I ++ +DGS+ +++ G+ L +D +YW D+ ++ +G +R II+
Sbjct: 542 IERANMDGSQRERLITEGVDTLEGLALDWIGRRIYWTDSGKSVVGGSDLSGKHHRIIIQE 601
Query: 117 NLPNPMGIAVH--KSDVYWVDRNLRTVYKASKL--------ASTNITLPTPI 158
+ P GIAVH ++W D + +++ L AS+N+ P+ I
Sbjct: 602 RISRPRGIAVHPRARRLFWTDVGMSPRIESASLQGSDRVLIASSNLLEPSGI 653
>sp|A4QPB2|LRP5L_HUMAN Low-density lipoprotein receptor-related protein 5-like protein
OS=Homo sapiens GN=LRP5L PE=2 SV=2
Length = 252
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
P L YWID+G+ P I ++ LD + +V+ + P L +D+Q +YW DAK D
Sbjct: 84 LHPEMGLTYWIDWGENPEIKRANLDRQELRVLVNASLGWPNGLALDLQEGKLYWGDAKTD 143
Query: 100 LIQKISYNGGNRQ-IIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPI 158
I+ IS + RQ +++ LP+ + +YW ++ + K+ + + +
Sbjct: 144 KIEAISVDETKRQTLLKDKLPHIFRFTLLGDFIYWTAWQHHSIKRVHKVKANRDVIIDQL 203
Query: 159 RTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVE 202
L GL+ + + +V P + NGG S P +
Sbjct: 204 -PDLMGLKAVNVDKVVGTNPHADR------NGGAATCASSRPTQ 240
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 47 LYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106
+YW D + I ++YLDGS ++++ I+ P D+ ++ +YW + I+
Sbjct: 5 VYWTDDEVWA-IRRAYLDGSGAQTLINTKINDPDDIAVNWVARSLYWTHTGTEHIEVTCL 63
Query: 107 NGGNRQI-IRRNLPNPMGIAVH--KSDVYWVD 135
N + +I + ++ P IA+H YW+D
Sbjct: 64 NSTSHKILVSEDMDEPRAIALHPEMGLTYWID 95
>sp|Q95RU0|CUE_DROME Protein cueball OS=Drosophila melanogaster GN=cue PE=1 SV=1
Length = 644
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 45 RLLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL--- 100
R LYW + +P + + LDGS T I+S+ I MPR + +D + ++W+D DL
Sbjct: 167 RKLYWTNSNVTHPTVERINLDGSNRTVIISSNIDMPRGIVVDQLSDRLFWID---DLKGV 223
Query: 101 ---IQKISYNGGNRQIIRRNLPN-PMGIAVHKSDVYWVDRNLRTVYKASKLASTNIT 153
++ +G +RQ++ ++ + P+ +AV +YW DR R V+ K+ +T
Sbjct: 224 FFSVESSKLDGSDRQVVLKDKHHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKVT 280
>sp|P14543|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3
Length = 1247
Score = 63.2 bits (152), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 47 LYWIDYGQ-YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105
LYW D+ + P+I SY+DG+ +V + + +P LT D + + WVDA + + ++
Sbjct: 1078 LYWTDWNRDNPKIETSYMDGTNRRILVQDDLGLPNGLTFDAFSSQLCWVDAGTNRAECLN 1137
Query: 106 YNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGL 165
+ +R+ L P + + ++Y+ D + +V S P +
Sbjct: 1138 PSQPSRRKALEGLQYPFAVTSYGKNLYFTDWKMNSVVALDLAISKETDAFQPHKQ----T 1193
Query: 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYP----VEFPQNKLHYKC 212
R I ++Q P +N C NGGC LC + P P N L C
Sbjct: 1194 RLYGITTALSQCPQGHNYC-SVNNGGCTHLCLATPGSRTCRCPDNTLGVDC 1243
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD 99
F + +++YW D + P IG++ L G + T+I+ + P + +D +++W D+ LD
Sbjct: 985 FDCVDKMVYWTDITE-PSIGRASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFWTDSNLD 1043
Query: 100 LIQKISYNGGNRQII-RRNLPNPMGIAVH--KSDVYWVDRN 137
I+ +G R+++ +L NP GI + ++YW D N
Sbjct: 1044 RIEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYWTDWN 1084
Score = 38.1 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGN-RQIIRRNLPNPMGIAVHK--SDVYWVDRNL 138
L D VYW D I + S +GG IIR++L +P GIAV +++W D NL
Sbjct: 983 LAFDCVDKMVYWTDITEPSIGRASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFWTDSNL 1042
Query: 139 RTVYKASKLAST 150
+ + +KL T
Sbjct: 1043 DRI-EVAKLDGT 1053
>sp|B4QMF4|CUE_DROSI Protein cueball OS=Drosophila simulans GN=cue PE=3 SV=1
Length = 644
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 45 RLLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL--- 100
R LYW + +P + + LDGS T I+++ I MPR + +D + ++W+D DL
Sbjct: 167 RKLYWTNSNVTHPTVERINLDGSNRTVIINSDIDMPRGIVVDQLSDRLFWID---DLKGV 223
Query: 101 ---IQKISYNGGNRQIIRRNLPN-PMGIAVHKSDVYWVDRNLRTVYKASKLASTNIT 153
++ +G +RQ++ ++ + P+ +AV +YW DR R V+ K+ +T
Sbjct: 224 FFSVESCKLDGSDRQVVLKDKHHEPLNLAVTNDAIYWTDRTTRAVWSHPKVPVIKVT 280
>sp|B4L8V5|CUE_DROMO Protein cueball OS=Drosophila mojavensis GN=cue PE=3 SV=1
Length = 634
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 45 RLLYW----IDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100
R LYW I++ RIG L+G+ I+ I MPR + ID Q+ +YW+D K+ +
Sbjct: 170 RQLYWTNSKINHASVERIG---LNGTGRQVIIKENIDMPRGIVIDQQSDRIYWLDDKVGI 226
Query: 101 ---IQKISYNGGNRQIIRRN-LPNPMGIAVHKSDVYWVDRNLRTVYK----ASKLASTNI 152
I+ +G +RQ++ + +P+ +A+ +YW D+ + V+ A+K +TN
Sbjct: 227 FFAIESARLDGSDRQLVLEDKHQSPIQLAITDETIYWTDKADKAVWSYPKPANKKLATNA 286
Query: 153 TLPT--PIR 159
T P PI+
Sbjct: 287 TEPVVEPIK 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,263,576
Number of Sequences: 539616
Number of extensions: 6605694
Number of successful extensions: 13812
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 12914
Number of HSP's gapped (non-prelim): 528
length of query: 407
length of database: 191,569,459
effective HSP length: 120
effective length of query: 287
effective length of database: 126,815,539
effective search space: 36396059693
effective search space used: 36396059693
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)