Query psy950
Match_columns 407
No_of_seqs 231 out of 1793
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 20:57:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s94_A LRP-6, low-density lipo 100.0 4.2E-68 1.4E-72 556.8 46.1 365 14-396 108-483 (619)
2 4a0p_A LRP6, LRP-6, low-densit 100.0 7.9E-68 2.7E-72 555.3 45.6 365 14-397 104-482 (628)
3 3sov_A LRP-6, low-density lipo 100.0 1.5E-40 5.3E-45 321.3 27.6 206 14-229 103-309 (318)
4 3s94_A LRP-6, low-density lipo 100.0 3E-39 1E-43 338.3 26.8 203 14-230 416-619 (619)
5 1ijq_A LDL receptor, low-densi 100.0 9E-39 3.1E-43 308.5 27.9 209 14-228 101-315 (316)
6 3v64_C Agrin; beta propeller, 100.0 3.7E-39 1.2E-43 315.6 25.1 203 14-229 140-343 (349)
7 3p5b_L Low density lipoprotein 100.0 1.1E-38 3.8E-43 317.8 27.3 211 14-229 183-398 (400)
8 4a0p_A LRP6, LRP-6, low-densit 100.0 4.4E-39 1.5E-43 337.4 23.1 206 14-229 413-620 (628)
9 3v65_B Low-density lipoprotein 100.0 5E-38 1.7E-42 311.6 26.5 202 14-228 183-385 (386)
10 3m0c_C LDL receptor, low-densi 100.0 1.5E-37 5.1E-42 332.3 27.8 211 14-229 495-710 (791)
11 1n7d_A LDL receptor, low-densi 100.0 1.3E-34 4.3E-39 307.5 16.4 210 14-229 477-692 (699)
12 3v64_C Agrin; beta propeller, 100.0 1.4E-31 4.9E-36 261.7 20.7 195 182-394 2-205 (349)
13 3p5b_L Low density lipoprotein 100.0 1.2E-29 4E-34 252.6 22.7 199 180-396 39-250 (400)
14 3sov_A LRP-6, low-density lipo 100.0 5.7E-28 2E-32 233.2 29.2 240 6-354 3-259 (318)
15 3v65_B Low-density lipoprotein 100.0 7.4E-28 2.5E-32 238.5 30.4 251 5-364 85-349 (386)
16 1ijq_A LDL receptor, low-densi 100.0 7.3E-27 2.5E-31 225.1 32.9 240 7-355 1-260 (316)
17 3m0c_C LDL receptor, low-densi 100.0 2.9E-28 9.8E-33 260.6 23.1 200 180-397 351-563 (791)
18 1npe_A Nidogen, entactin; glyc 99.9 5.6E-23 1.9E-27 192.2 32.3 241 7-356 1-262 (267)
19 1n7d_A LDL receptor, low-densi 99.9 2.2E-25 7.5E-30 236.6 12.2 197 180-394 333-542 (699)
20 1npe_A Nidogen, entactin; glyc 99.9 1.7E-20 5.9E-25 175.2 28.2 230 45-389 2-248 (267)
21 3tc9_A Hypothetical hydrolase; 99.8 1.4E-16 4.9E-21 159.6 26.7 228 31-367 135-421 (430)
22 3s25_A Hypothetical 7-bladed b 99.7 1.9E-15 6.4E-20 144.3 29.2 262 36-388 19-301 (302)
23 3hrp_A Uncharacterized protein 99.7 1.7E-15 6E-20 150.7 28.7 229 31-367 129-401 (409)
24 4hw6_A Hypothetical protein, I 99.7 9.8E-16 3.4E-20 153.6 25.5 229 31-367 137-424 (433)
25 2qc5_A Streptogramin B lactona 99.6 8.6E-13 3E-17 123.1 32.3 264 28-364 15-290 (300)
26 3kya_A Putative phosphatase; s 99.6 2E-13 6.9E-18 137.9 26.7 243 30-367 136-466 (496)
27 1rwi_B Serine/threonine-protei 99.6 3E-13 1E-17 124.9 25.7 237 28-337 16-265 (270)
28 3s25_A Hypothetical 7-bladed b 99.6 1.2E-14 4E-19 138.8 15.5 122 16-148 171-293 (302)
29 3fvz_A Peptidyl-glycine alpha- 99.6 1.7E-12 5.8E-17 124.6 30.4 239 30-367 21-313 (329)
30 2z2n_A Virginiamycin B lyase; 99.6 2.3E-11 8E-16 113.2 34.5 264 25-364 7-284 (299)
31 3tc9_A Hypothetical hydrolase; 99.5 2.2E-12 7.7E-17 129.0 27.4 118 29-148 175-301 (430)
32 1q7f_A NHL, brain tumor CG1071 99.5 6.6E-12 2.3E-16 117.2 28.4 224 31-364 28-269 (286)
33 3hrp_A Uncharacterized protein 99.5 6.3E-12 2.1E-16 124.9 28.5 206 32-334 171-408 (409)
34 1rwi_B Serine/threonine-protei 99.5 9.9E-12 3.4E-16 114.6 25.0 217 78-366 25-254 (270)
35 2p4o_A Hypothetical protein; p 99.5 5E-11 1.7E-15 113.3 28.9 229 33-365 32-278 (306)
36 4hw6_A Hypothetical protein, I 99.5 1.4E-11 4.9E-16 123.3 26.2 118 29-148 178-304 (433)
37 3dsm_A Uncharacterized protein 99.5 7.8E-11 2.7E-15 113.1 29.9 259 33-353 44-320 (328)
38 3fvz_A Peptidyl-glycine alpha- 99.5 3.2E-11 1.1E-15 115.6 27.0 117 30-148 88-227 (329)
39 2ism_A Putative oxidoreductase 99.4 2.3E-11 7.8E-16 118.4 24.7 255 23-367 21-336 (352)
40 3vgz_A Uncharacterized protein 99.4 1.5E-09 5E-14 103.4 36.0 268 33-365 41-334 (353)
41 3kya_A Putative phosphatase; s 99.4 1.5E-10 5.1E-15 116.9 26.5 115 32-148 185-341 (496)
42 3a9g_A Putative uncharacterize 99.4 4.8E-10 1.6E-14 109.2 29.1 252 23-365 19-331 (354)
43 2fp8_A Strictosidine synthase; 99.4 3.4E-10 1.2E-14 108.0 27.1 239 26-337 12-314 (322)
44 2qc5_A Streptogramin B lactona 99.3 2.6E-09 8.9E-14 99.2 30.9 229 30-334 59-298 (300)
45 2z2n_A Virginiamycin B lyase; 99.3 5.1E-09 1.7E-13 97.2 31.2 230 31-336 55-295 (299)
46 3dsm_A Uncharacterized protein 99.3 1.5E-09 5.1E-14 104.1 26.0 289 47-405 4-325 (328)
47 2qe8_A Uncharacterized protein 99.3 4.7E-09 1.6E-13 101.2 29.6 248 33-366 17-311 (343)
48 1q7f_A NHL, brain tumor CG1071 99.3 3.2E-09 1.1E-13 98.8 26.9 115 32-147 76-193 (286)
49 3g4e_A Regucalcin; six bladed 99.3 6.6E-09 2.3E-13 97.9 29.1 238 25-365 5-262 (297)
50 3e5z_A Putative gluconolactona 99.2 3.5E-08 1.2E-12 92.3 30.4 241 23-337 18-287 (296)
51 3dr2_A Exported gluconolactona 99.2 1.7E-08 6E-13 95.3 27.6 246 22-364 34-296 (305)
52 2g8s_A Glucose/sorbosone dehyd 99.1 5.8E-09 2E-13 101.4 22.4 274 24-333 9-351 (353)
53 3u4y_A Uncharacterized protein 99.1 7.6E-08 2.6E-12 90.9 29.7 262 39-365 4-293 (331)
54 3u4y_A Uncharacterized protein 99.1 2.2E-07 7.5E-12 87.7 32.2 253 25-338 33-306 (331)
55 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1E-07 3.5E-12 89.3 27.2 245 27-336 12-299 (314)
56 3hfq_A Uncharacterized protein 99.1 2.3E-07 7.8E-12 88.5 29.6 248 29-335 36-316 (347)
57 3vgz_A Uncharacterized protein 99.1 6E-07 2E-11 85.1 32.0 229 33-324 89-334 (353)
58 2dg1_A DRP35, lactonase; beta 99.1 2.2E-07 7.5E-12 88.1 28.7 226 28-364 40-299 (333)
59 1ri6_A Putative isomerase YBHE 99.0 8.8E-07 3E-11 83.3 32.4 272 30-358 35-336 (343)
60 3e5z_A Putative gluconolactona 99.0 2.6E-07 9E-12 86.3 28.1 249 64-364 16-276 (296)
61 1ri6_A Putative isomerase YBHE 99.0 7.8E-07 2.7E-11 83.7 31.4 263 43-366 3-298 (343)
62 3scy_A Hypothetical bacterial 99.0 1E-06 3.6E-11 84.4 31.2 283 34-365 3-326 (361)
63 2fp8_A Strictosidine synthase; 99.0 1.3E-07 4.4E-12 90.0 24.1 114 33-148 80-216 (322)
64 3g4e_A Regucalcin; six bladed 99.0 1.6E-07 5.6E-12 88.3 24.5 77 69-148 5-82 (297)
65 3qqz_A Putative uncharacterize 99.0 3.4E-07 1.2E-11 84.6 25.3 191 77-364 27-242 (255)
66 1l0q_A Surface layer protein; 98.9 7.3E-06 2.5E-10 79.0 34.6 239 32-338 31-277 (391)
67 3a9g_A Putative uncharacterize 98.9 2.7E-07 9.2E-12 89.6 24.0 109 31-140 71-220 (354)
68 2p4o_A Hypothetical protein; p 98.9 1.3E-06 4.3E-11 82.6 27.2 115 32-148 71-198 (306)
69 2ism_A Putative oxidoreductase 98.9 1.2E-07 4.2E-12 91.9 20.4 110 30-140 72-225 (352)
70 1l0q_A Surface layer protein; 98.9 5.6E-06 1.9E-10 79.8 31.1 252 45-364 2-263 (391)
71 1kli_L Factor VIIA; extrinsic 98.9 9.3E-10 3.2E-14 80.4 3.2 47 180-233 4-50 (69)
72 3hfq_A Uncharacterized protein 98.8 3.7E-06 1.3E-10 80.0 28.8 270 45-366 3-307 (347)
73 2ghs_A AGR_C_1268P; regucalcin 98.8 4.7E-06 1.6E-10 79.4 29.4 226 25-365 41-292 (326)
74 1mda_H Methylamine dehydrogena 98.8 8.8E-07 3E-11 86.4 23.8 266 43-355 30-367 (368)
75 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.7E-06 5.8E-11 80.8 25.0 239 72-365 13-288 (314)
76 2iwa_A Glutamine cyclotransfer 98.8 1.9E-06 6.4E-11 80.1 24.7 191 77-336 21-237 (266)
77 3c75_H MADH, methylamine dehyd 98.8 1.4E-06 4.8E-11 86.5 25.4 280 15-354 100-422 (426)
78 3sjl_D Methylamine dehydrogena 98.8 5.1E-06 1.7E-10 81.3 28.7 291 38-355 38-384 (386)
79 3scy_A Hypothetical bacterial 98.8 2.6E-05 9E-10 74.5 33.6 249 31-335 48-336 (361)
80 2qe8_A Uncharacterized protein 98.8 1.2E-07 4.2E-12 91.2 16.9 83 31-114 65-161 (343)
81 3das_A Putative oxidoreductase 98.8 5.6E-06 1.9E-10 79.9 28.3 256 24-325 23-328 (347)
82 3qqz_A Putative uncharacterize 98.8 5.5E-06 1.9E-10 76.5 26.1 202 32-335 26-252 (255)
83 3c75_H MADH, methylamine dehyd 98.8 1.1E-06 3.8E-11 87.3 22.8 265 42-375 82-400 (426)
84 2g8s_A Glucose/sorbosone dehyd 98.8 1E-06 3.6E-11 85.4 22.1 260 65-364 7-341 (353)
85 1nir_A Nitrite reductase; hemo 98.8 2.9E-05 1E-09 79.5 33.7 299 35-401 181-539 (543)
86 2oiz_A Aromatic amine dehydrog 98.7 2.8E-05 9.7E-10 75.2 31.7 264 33-357 51-360 (361)
87 1pby_B Quinohemoprotein amine 98.7 4.3E-05 1.5E-09 71.4 31.6 257 34-338 35-312 (337)
88 2mad_H Methylamine dehydrogena 98.7 7.7E-05 2.6E-09 72.6 34.2 258 34-352 68-369 (373)
89 2bz6_L Blood coagulation facto 98.7 5.4E-09 1.8E-13 72.3 2.7 43 184-233 2-44 (53)
90 2wph_E Coagulation factor IXA 98.7 7.3E-09 2.5E-13 73.3 3.0 40 184-230 2-41 (59)
91 3bws_A Protein LP49; two-domai 98.7 4.8E-05 1.7E-09 74.2 30.9 273 33-364 123-420 (433)
92 1kig_L Factor XA; glycoprotein 98.6 8.5E-09 2.9E-13 70.7 1.8 41 184-232 1-41 (51)
93 2p9w_A MAL S 1 allergenic prot 98.6 1.7E-05 5.7E-10 75.6 25.1 234 27-364 7-303 (334)
94 1jof_A Carboxy-CIS,CIS-muconat 98.6 6.6E-05 2.3E-09 72.2 30.1 114 31-147 38-175 (365)
95 2jkh_L Factor X light chain; p 98.6 1.4E-08 5E-13 70.8 2.8 42 182-231 2-43 (55)
96 2dg1_A DRP35, lactonase; beta 98.6 4.9E-05 1.7E-09 71.7 28.4 115 31-147 85-212 (333)
97 3dr2_A Exported gluconolactona 98.6 1.3E-05 4.4E-10 75.3 23.5 114 30-148 83-224 (305)
98 3nok_A Glutaminyl cyclase; bet 98.6 5.1E-06 1.7E-10 76.7 19.1 65 80-148 58-125 (268)
99 1qks_A Cytochrome CD1 nitrite 98.5 0.00024 8.1E-09 73.2 33.3 321 15-401 178-563 (567)
100 2mad_H Methylamine dehydrogena 98.5 0.0008 2.7E-08 65.4 34.8 268 41-374 29-347 (373)
101 2iwa_A Glutamine cyclotransfer 98.5 5.8E-05 2E-09 70.0 25.1 112 33-148 21-135 (266)
102 3das_A Putative oxidoreductase 98.5 0.00011 3.7E-09 70.8 27.5 251 71-364 26-326 (347)
103 1nir_A Nitrite reductase; hemo 98.5 0.00011 3.7E-09 75.2 28.8 267 39-362 144-438 (543)
104 1qks_A Cytochrome CD1 nitrite 98.4 0.00096 3.3E-08 68.6 33.8 282 40-378 163-478 (567)
105 3mbr_X Glutamine cyclotransfer 98.4 0.00016 5.3E-09 66.0 23.9 68 78-148 22-94 (243)
106 1cru_A Protein (soluble quinop 98.4 8.3E-06 2.9E-10 81.8 16.6 146 23-171 17-236 (454)
107 3bws_A Protein LP49; two-domai 98.4 0.00041 1.4E-08 67.5 28.2 236 34-336 171-432 (433)
108 3mbr_X Glutamine cyclotransfer 98.3 0.00043 1.5E-08 63.1 26.0 108 35-148 23-133 (243)
109 3sre_A PON1, serum paraoxonase 98.3 0.00014 4.6E-09 70.4 23.2 104 32-136 49-183 (355)
110 3nok_A Glutaminyl cyclase; bet 98.3 0.00038 1.3E-08 64.2 24.9 105 36-148 58-164 (268)
111 3nol_A Glutamine cyclotransfer 98.3 0.00014 4.8E-09 67.0 20.7 66 80-148 46-116 (262)
112 1jmx_B Amine dehydrogenase; ox 98.2 0.0012 4.2E-08 61.7 28.0 254 34-338 44-327 (349)
113 1pby_B Quinohemoprotein amine 98.2 0.00058 2E-08 63.5 24.9 100 48-148 4-124 (337)
114 1fwx_A Nitrous oxide reductase 98.1 4.7E-05 1.6E-09 78.0 14.4 275 43-356 100-455 (595)
115 2oiz_A Aromatic amine dehydrog 98.0 0.002 6.9E-08 62.0 25.3 103 44-148 15-140 (361)
116 1jmx_B Amine dehydrogenase; ox 98.0 0.0086 2.9E-07 55.8 30.6 99 36-136 3-111 (349)
117 2ghs_A AGR_C_1268P; regucalcin 98.0 0.00018 6.3E-09 68.2 17.2 111 34-148 135-260 (326)
118 1mda_H Methylamine dehydrogena 98.0 0.00044 1.5E-08 67.2 19.4 128 15-147 47-193 (368)
119 1apq_A Complement protease C1R 98.0 4.4E-06 1.5E-10 57.4 3.6 41 180-228 3-51 (53)
120 1jof_A Carboxy-CIS,CIS-muconat 97.9 0.0071 2.4E-07 57.8 26.4 102 262-365 192-330 (365)
121 3sre_A PON1, serum paraoxonase 97.9 0.00044 1.5E-08 66.8 16.9 112 34-148 113-252 (355)
122 1cru_A Protein (soluble quinop 97.8 9.4E-05 3.2E-09 74.1 10.8 105 34-139 78-249 (454)
123 2hqs_A Protein TOLB; TOLB, PAL 97.8 0.034 1.2E-06 54.3 30.9 234 56-356 159-409 (415)
124 3f1s_B Vitamin K-dependent pro 97.7 1E-05 3.4E-10 75.9 2.0 41 181-229 2-43 (283)
125 2p9w_A MAL S 1 allergenic prot 97.7 0.0011 3.7E-08 63.1 15.7 111 34-147 64-214 (334)
126 2ece_A 462AA long hypothetical 97.6 0.014 4.9E-07 57.7 23.0 104 42-148 93-237 (462)
127 3q6k_A 43.2 kDa salivary prote 97.5 0.09 3.1E-06 50.9 28.4 241 34-363 27-341 (381)
128 3nol_A Glutamine cyclotransfer 97.4 0.016 5.5E-07 53.2 19.6 110 34-148 86-201 (262)
129 2ece_A 462AA long hypothetical 97.4 0.11 3.9E-06 51.3 28.7 98 264-363 252-399 (462)
130 3pe7_A Oligogalacturonate lyas 97.4 0.055 1.9E-06 51.3 24.1 110 1-115 3-118 (388)
131 2ecf_A Dipeptidyl peptidase IV 97.3 0.21 7.2E-06 52.0 30.7 111 34-148 38-181 (741)
132 2wg3_C Hedgehog-interacting pr 97.2 0.1 3.6E-06 51.9 24.2 102 34-136 70-242 (463)
133 3amr_A 3-phytase; beta-propell 97.1 0.024 8.2E-07 54.3 17.8 115 30-147 125-262 (355)
134 1aut_L Activated protein C; se 97.1 0.00023 8E-09 57.0 3.2 40 182-229 55-94 (114)
135 1szb_A Mannose binding lectin- 97.1 0.00028 9.4E-09 60.7 3.2 41 181-229 124-167 (170)
136 2wg3_C Hedgehog-interacting pr 97.0 0.0086 2.9E-07 59.9 13.6 148 22-171 3-225 (463)
137 1nzi_A Complement C1S componen 96.9 0.0005 1.7E-08 58.3 3.3 42 181-229 117-158 (159)
138 2w2n_E LDL receptor, low-densi 96.9 0.00047 1.6E-08 54.6 2.9 41 180-229 28-68 (107)
139 3q6k_A 43.2 kDa salivary prote 96.8 0.021 7.2E-07 55.4 14.7 104 33-137 220-343 (381)
140 2hqs_A Protein TOLB; TOLB, PAL 96.7 0.53 1.8E-05 45.6 30.5 132 15-148 162-300 (415)
141 3amr_A 3-phytase; beta-propell 96.6 0.41 1.4E-05 45.7 21.8 73 262-337 179-264 (355)
142 3sjl_D Methylamine dehydrogena 96.6 0.0069 2.3E-07 59.0 9.7 97 271-370 41-162 (386)
143 1fwx_A Nitrous oxide reductase 96.6 0.038 1.3E-06 56.6 15.0 114 34-148 196-361 (595)
144 2ojh_A Uncharacterized protein 96.6 0.37 1.3E-05 42.8 24.6 112 32-147 41-161 (297)
145 3o4h_A Acylamino-acid-releasin 96.6 0.31 1.1E-05 49.2 22.1 254 35-362 24-298 (582)
146 1x7a_L Coagulation factor IX, 96.5 0.00084 2.9E-08 56.3 2.1 41 181-229 85-126 (146)
147 1nfu_B Coagulation factor XA, 96.5 0.001 3.5E-08 58.5 2.7 40 182-229 82-121 (195)
148 2vh0_B Activated factor XA lig 96.4 0.0013 4.5E-08 54.2 2.5 40 182-229 82-121 (134)
149 2c4f_L Coagulation factor VII 96.4 0.0017 5.8E-08 54.1 2.9 36 188-229 94-129 (142)
150 1lmj_A Fibrillin 1; EGF, calci 96.3 0.0012 4.2E-08 49.8 1.8 41 180-228 45-86 (86)
151 2w2n_E LDL receptor, low-densi 96.2 0.00089 3.1E-08 53.0 0.1 40 180-228 68-107 (107)
152 1z6c_A Vitamin K-dependent pro 95.8 0.0042 1.4E-07 47.0 2.6 41 181-229 3-44 (87)
153 2z3z_A Dipeptidyl aminopeptida 95.8 2.1 7.1E-05 44.1 30.2 69 33-108 82-150 (706)
154 1uzk_A Fibrillin-1; glycoprote 95.6 0.0046 1.6E-07 52.5 2.3 41 180-228 121-162 (162)
155 2w86_A Fibrillin-1, fibrillin1 95.6 0.0041 1.4E-07 51.9 1.9 41 180-228 106-147 (147)
156 3no2_A Uncharacterized protein 95.3 0.73 2.5E-05 42.0 16.5 111 35-148 79-195 (276)
157 3o4h_A Acylamino-acid-releasin 95.3 2.5 8.5E-05 42.5 22.0 125 18-148 50-184 (582)
158 2ojh_A Uncharacterized protein 95.2 1.5 5.2E-05 38.6 26.8 241 55-363 21-290 (297)
159 3no2_A Uncharacterized protein 95.0 0.41 1.4E-05 43.8 13.6 110 34-148 126-253 (276)
160 4a9v_A PHOX; hydrolase, beta-p 94.9 0.29 9.8E-06 49.8 13.1 106 30-136 381-550 (592)
161 1lmj_A Fibrillin 1; EGF, calci 94.8 0.016 5.5E-07 43.5 2.9 41 181-229 3-45 (86)
162 3h5c_B Vitamin K-dependent pro 94.8 0.017 5.7E-07 54.6 3.6 43 180-229 42-84 (317)
163 2kl7_A Fibulin-4; secreted, ca 94.7 0.025 8.4E-07 41.0 3.4 36 181-224 3-41 (71)
164 2ecf_A Dipeptidyl peptidase IV 94.7 4.7 0.00016 41.6 31.0 75 35-115 111-188 (741)
165 2z3z_A Dipeptidyl aminopeptida 94.6 4.6 0.00016 41.4 28.0 71 268-338 361-437 (706)
166 3c5m_A Oligogalacturonate lyas 94.5 3 0.0001 38.8 27.0 80 35-115 38-118 (396)
167 2pm9_A Protein WEB1, protein t 94.5 3.2 0.00011 39.0 26.8 247 33-338 68-339 (416)
168 1z6c_A Vitamin K-dependent pro 94.3 0.015 5.3E-07 43.8 1.7 40 180-229 44-85 (87)
169 1gl4_A Nidogen-1, entactin; im 94.2 0.012 4.1E-07 54.4 1.1 41 180-230 4-46 (285)
170 2xdw_A Prolyl endopeptidase; a 94.2 6.1 0.00021 40.9 27.0 94 42-136 81-190 (710)
171 1k32_A Tricorn protease; prote 94.0 8.4 0.00029 41.9 28.6 95 264-364 297-398 (1045)
172 1uzk_A Fibrillin-1; glycoprote 93.9 0.032 1.1E-06 47.1 3.1 41 181-230 3-44 (162)
173 3zwl_B Eukaryotic translation 93.7 4 0.00014 37.3 34.5 295 12-361 11-332 (369)
174 1dx5_I Thrombomodulin; serine 93.5 0.018 6.3E-07 46.0 0.9 39 180-227 79-118 (118)
175 3azo_A Aminopeptidase; POP fam 93.5 0.72 2.5E-05 47.2 13.1 116 33-148 130-274 (662)
176 1emn_A Fibrillin; extracellula 93.3 0.057 2E-06 40.0 3.3 38 181-228 44-82 (82)
177 1emn_A Fibrillin; extracellula 92.6 0.05 1.7E-06 40.4 2.1 38 180-228 4-42 (82)
178 1yr2_A Prolyl oligopeptidase; 92.4 12 0.0004 39.0 25.3 70 42-111 116-201 (741)
179 1edm_B Factor IX; epidermal gr 92.4 0.11 3.8E-06 32.4 3.2 23 195-228 16-38 (39)
180 3pe7_A Oligogalacturonate lyas 92.1 1.2 4.2E-05 41.7 11.8 113 35-147 240-383 (388)
181 2aq5_A Coronin-1A; WD40 repeat 91.9 8.4 0.00029 36.2 24.8 267 31-358 33-327 (402)
182 3azo_A Aminopeptidase; POP fam 91.7 4.6 0.00016 41.1 16.4 117 32-148 241-369 (662)
183 2bou_A EGF-like module contain 91.5 0.079 2.7E-06 43.6 2.2 41 181-229 96-138 (143)
184 2w86_A Fibrillin-1, fibrillin1 91.4 0.097 3.3E-06 43.3 2.7 40 180-229 3-43 (147)
185 3u7u_G Neuregulin 1; signaling 90.8 0.15 5E-06 34.8 2.6 36 180-228 12-48 (55)
186 1k32_A Tricorn protease; prote 90.4 6.2 0.00021 43.0 16.7 106 31-138 377-493 (1045)
187 2bkl_A Prolyl endopeptidase; m 89.9 19 0.00066 36.9 23.7 94 42-136 77-187 (695)
188 4g56_B MGC81050 protein; prote 89.6 5.9 0.0002 37.0 13.9 98 263-362 227-329 (357)
189 1nt0_A MAsp2, mannose-binding 89.6 0.29 1E-05 45.2 4.5 34 190-230 131-164 (286)
190 2gop_A Trilobed protease; beta 89.5 4.4 0.00015 37.1 12.8 61 33-95 59-122 (347)
191 1k36_A Epiregulin; EGF-like fo 89.4 0.28 9.5E-06 32.0 3.0 16 209-228 27-42 (46)
192 3dem_A Complement factor MAsp- 89.0 0.21 7.1E-06 45.9 3.0 41 182-229 122-164 (278)
193 1dx5_I Thrombomodulin; serine 88.7 0.22 7.6E-06 39.6 2.6 33 180-222 3-36 (118)
194 1egf_A Epidermal growth factor 88.6 0.39 1.3E-05 32.2 3.5 16 209-228 28-43 (53)
195 1xfd_A DIP, dipeptidyl aminope 88.6 23 0.00079 36.1 26.1 111 33-148 17-143 (723)
196 1xfd_A DIP, dipeptidyl aminope 88.1 25 0.00085 35.8 32.3 79 34-114 62-149 (723)
197 1hae_A Heregulin-alpha; growth 88.0 0.28 9.6E-06 34.2 2.5 16 209-228 31-46 (63)
198 4gqb_B Methylosome protein 50; 87.9 14 0.00047 34.4 15.1 97 264-362 216-317 (344)
199 1a3p_A Epidermal growth factor 86.8 0.45 1.5E-05 30.7 2.7 16 209-228 25-40 (45)
200 1r5m_A SIR4-interacting protei 86.5 20 0.00069 33.1 34.4 274 33-364 46-350 (425)
201 2xyi_A Probable histone-bindin 85.7 25 0.00085 33.4 26.7 99 262-362 277-396 (430)
202 2aq5_A Coronin-1A; WD40 repeat 85.3 24 0.00083 32.9 25.4 112 34-147 83-206 (402)
203 3c5m_A Oligogalacturonate lyas 83.9 18 0.0006 33.4 13.7 83 32-114 187-279 (396)
204 1nql_B Epidermal growth factor 83.0 0.68 2.3E-05 31.1 2.3 16 209-228 28-43 (53)
205 2xyi_A Probable histone-bindin 82.4 34 0.0012 32.4 27.8 243 32-336 128-410 (430)
206 1z1y_A Ookinete surface protei 82.2 0.42 1.4E-05 41.1 1.3 40 181-229 96-136 (186)
207 1r5m_A SIR4-interacting protei 82.1 31 0.0011 31.8 33.5 74 34-111 110-183 (425)
208 2vdu_B TRNA (guanine-N(7)-)-me 82.0 36 0.0012 32.4 31.0 70 78-148 104-180 (450)
209 4a9v_A PHOX; hydrolase, beta-p 81.4 3.8 0.00013 41.6 8.1 65 31-96 474-550 (592)
210 2pm9_A Protein WEB1, protein t 81.3 34 0.0012 31.6 22.7 99 262-362 214-323 (416)
211 1gxr_A ESG1, transducin-like e 81.3 29 0.00099 30.8 33.8 260 33-363 52-325 (337)
212 3mkq_A Coatomer beta'-subunit; 80.9 54 0.0018 33.7 32.8 94 32-128 13-107 (814)
213 2vj3_A Neurogenic locus notch 80.4 1.2 4.1E-05 36.0 3.4 32 180-219 4-37 (135)
214 1x7a_L Coagulation factor IX, 79.9 1 3.5E-05 37.1 2.8 35 180-228 47-83 (146)
215 4e54_B DNA damage-binding prot 79.8 41 0.0014 31.9 14.9 98 262-362 164-268 (435)
216 2k2s_B Micronemal protein 6; m 79.8 0.56 1.9E-05 32.6 1.0 18 195-219 26-43 (61)
217 3ca7_A Protein spitz; argos, E 79.4 0.69 2.4E-05 30.8 1.3 16 209-228 32-47 (52)
218 2c4f_L Coagulation factor VII 78.8 1 3.4E-05 36.9 2.4 35 180-228 46-82 (142)
219 1yo8_A Thrombospondin-2; EGF, 78.0 1.3 4.5E-05 45.6 3.5 33 180-220 43-81 (634)
220 3zwu_A Alkaline phosphatase PH 77.8 20 0.00069 36.5 12.3 64 31-95 382-493 (592)
221 1yo8_A Thrombospondin-2; EGF, 77.5 1.1 3.9E-05 46.0 2.9 43 180-228 101-145 (634)
222 2ymu_A WD-40 repeat protein; u 76.9 57 0.002 31.8 34.9 259 33-363 263-527 (577)
223 4g56_B MGC81050 protein; prote 76.4 32 0.0011 31.8 12.7 111 35-146 229-341 (357)
224 2ymu_A WD-40 repeat protein; u 76.2 60 0.0021 31.6 34.6 258 33-362 222-485 (577)
225 1yr2_A Prolyl oligopeptidase; 75.0 80 0.0027 32.5 18.5 122 25-148 257-395 (741)
226 3iuj_A Prolyl endopeptidase; h 75.0 78 0.0027 32.4 17.9 121 25-148 222-359 (693)
227 2bou_A EGF-like module contain 73.9 2 6.9E-05 34.9 3.0 36 180-223 43-81 (143)
228 1nfu_B Coagulation factor XA, 73.2 0.7 2.4E-05 40.2 0.0 35 180-228 41-77 (195)
229 3iuj_A Prolyl endopeptidase; h 72.6 89 0.003 31.9 27.7 90 270-362 287-388 (693)
230 2bkl_A Prolyl endopeptidase; m 72.1 90 0.0031 31.8 16.1 120 25-147 216-350 (695)
231 2xdw_A Prolyl endopeptidase; a 71.7 92 0.0032 31.8 20.3 114 35-148 173-320 (710)
232 3ei3_B DNA damage-binding prot 71.0 63 0.0022 29.5 18.4 132 14-147 98-235 (383)
233 4aez_A CDC20, WD repeat-contai 70.9 67 0.0023 29.8 31.2 257 40-363 99-368 (401)
234 3nt1_A Prostaglandin-endoperox 70.6 2 6.7E-05 43.9 2.6 17 209-229 22-39 (587)
235 3e50_C Protransforming growth 70.2 3.1 0.00011 27.5 2.6 17 209-229 29-45 (50)
236 3ltf_D Protein spitz; receptor 70.1 1.6 5.6E-05 29.8 1.3 16 209-228 32-47 (58)
237 3hxj_A Pyrrolo-quinoline quino 69.9 60 0.002 28.8 13.8 104 35-147 139-243 (330)
238 4a5s_A Dipeptidyl peptidase 4 69.5 74 0.0025 32.7 14.6 114 35-148 262-400 (740)
239 1tl2_A L10, protein (tachylect 69.3 61 0.0021 28.7 12.0 103 26-135 33-152 (236)
240 1gxr_A ESG1, transducin-like e 69.0 61 0.0021 28.6 32.6 113 33-148 98-214 (337)
241 1xdt_R Hbegf, heparin-binding 68.7 2.6 8.7E-05 30.8 2.1 16 209-228 61-76 (79)
242 1tpg_A T-plasminogen activator 68.0 3.9 0.00013 30.5 3.2 25 195-228 61-85 (91)
243 4e54_B DNA damage-binding prot 68.0 82 0.0028 29.7 15.5 113 34-147 121-239 (435)
244 2vh0_B Activated factor XA lig 67.2 1.1 3.9E-05 36.2 0.0 34 181-228 42-77 (134)
245 1q4g_A Prostaglandin G/H synth 66.9 2.4 8.3E-05 43.0 2.4 16 209-228 23-39 (553)
246 2rnl_A Amphiregulin; AR, color 64.7 6.1 0.00021 26.1 3.2 16 209-228 33-48 (50)
247 2gop_A Trilobed protease; beta 64.4 80 0.0027 28.3 15.1 94 35-135 106-233 (347)
248 4d90_A EGF-like repeat and dis 63.6 5.3 0.00018 32.1 3.5 24 194-228 109-132 (143)
249 4a11_B DNA excision repair pro 63.5 88 0.003 28.4 29.3 94 32-127 43-150 (408)
250 2zuy_A YESX protein; beta-prop 62.2 1.3E+02 0.0045 30.5 13.8 119 12-136 272-412 (620)
251 1g1s_A P-selectin; selectin, l 57.8 5.1 0.00017 33.0 2.4 23 195-228 132-154 (162)
252 3ow8_A WD repeat-containing pr 56.8 1.1E+02 0.0038 27.4 20.6 112 33-147 165-278 (321)
253 3hxj_A Pyrrolo-quinoline quino 55.7 1.1E+02 0.0037 27.0 14.1 104 35-147 179-283 (330)
254 4a5s_A Dipeptidyl peptidase 4 54.4 45 0.0015 34.4 9.6 75 35-112 321-404 (740)
255 2vdu_B TRNA (guanine-N(7)-)-me 54.2 1.4E+02 0.0049 28.0 27.8 94 34-129 104-206 (450)
256 3h5c_B Vitamin K-dependent pro 54.2 5.2 0.00018 37.1 2.0 18 195-219 18-35 (317)
257 4d90_A EGF-like repeat and dis 53.7 7.1 0.00024 31.4 2.6 25 195-228 13-37 (143)
258 1yfq_A Cell cycle arrest prote 53.5 1.2E+02 0.0041 26.8 11.7 97 263-364 12-120 (342)
259 1iox_A Betacellulin; EGF-like 52.9 7.1 0.00024 25.7 2.0 16 209-228 29-44 (50)
260 1z1y_A Ookinete surface protei 52.1 8.1 0.00028 32.7 2.8 26 193-225 150-175 (186)
261 2zux_A YESW protein; beta-prop 51.6 2E+02 0.007 29.0 13.1 118 13-136 269-408 (591)
262 3mkq_A Coatomer beta'-subunit; 50.9 2.2E+02 0.0074 29.0 33.2 113 32-147 55-171 (814)
263 3ow8_A WD repeat-containing pr 50.7 1.4E+02 0.0047 26.8 21.2 114 32-148 122-237 (321)
264 3asi_A Neurexin-1-alpha; beta- 50.5 16 0.00056 35.0 5.0 25 195-230 198-223 (410)
265 2vj3_A Neurogenic locus notch 47.2 13 0.00045 29.6 3.2 24 194-228 57-80 (135)
266 4aqb_A Mannan-binding lectin s 44.7 15 0.00052 34.5 3.7 34 189-229 131-164 (361)
267 1k8k_C P40, ARP2/3 complex 41 44.4 1.7E+02 0.0059 26.0 31.4 109 33-145 9-124 (372)
268 1yfq_A Cell cycle arrest prote 44.1 1.7E+02 0.0057 25.8 30.0 108 34-145 13-128 (342)
269 2ygo_A WIF-1, WNT inhibitory f 43.9 10 0.00035 32.4 2.1 16 210-229 165-180 (188)
270 4aez_A CDC20, WD repeat-contai 43.7 2E+02 0.0067 26.5 33.9 235 33-338 135-382 (401)
271 3mmy_A MRNA export factor; mRN 43.2 1.7E+02 0.006 25.7 31.6 113 33-147 40-159 (368)
272 2xe4_A Oligopeptidase B; hydro 43.1 3E+02 0.01 28.4 16.0 113 36-148 224-354 (751)
273 3k26_A Polycomb protein EED; W 42.0 1.8E+02 0.0062 25.6 17.2 100 263-364 70-181 (366)
274 1n1i_A Merozoite surface prote 41.4 18 0.00063 27.7 2.9 40 182-228 51-94 (105)
275 1aut_L Activated protein C; se 41.4 13 0.00045 28.7 2.2 23 195-228 27-49 (114)
276 2oit_A Nucleoporin 214KDA; NH2 41.3 2.1E+02 0.0073 27.1 11.6 79 34-114 151-229 (434)
277 3dwl_C Actin-related protein 2 40.7 1.9E+02 0.0066 25.9 10.8 109 34-145 57-174 (377)
278 2oit_A Nucleoporin 214KDA; NH2 40.3 80 0.0027 30.2 8.2 100 262-363 92-211 (434)
279 1ccv_A AMCI, chymotrypsin inhi 39.5 22 0.00075 23.7 2.8 20 210-230 34-53 (56)
280 2xe4_A Oligopeptidase B; hydro 39.0 3.4E+02 0.012 27.9 16.0 109 36-146 274-398 (751)
281 3k26_A Polycomb protein EED; W 37.0 2.2E+02 0.0075 25.1 17.3 114 33-147 70-191 (366)
282 1vyh_C Platelet-activating fac 33.7 2.9E+02 0.0099 25.5 31.2 110 35-147 111-222 (410)
283 1ob1_C Major merozoite surface 33.0 27 0.00093 26.5 2.6 36 181-219 46-83 (99)
284 3sfz_A APAF-1, apoptotic pepti 30.7 5.4E+02 0.018 27.7 34.8 278 29-364 612-902 (1249)
285 2fd6_A Urokinase-type plasmino 29.9 24 0.00081 27.8 2.0 15 210-228 19-33 (122)
286 3dwl_C Actin-related protein 2 29.4 3.1E+02 0.01 24.5 11.5 72 33-107 101-176 (377)
287 1z68_A Fibroblast activation p 28.2 4.6E+02 0.016 26.2 12.6 96 265-364 62-188 (719)
288 2nx7_A Nematocyst outer WALL a 27.9 10 0.00035 20.7 -0.3 18 181-199 2-19 (28)
289 3i2n_A WD repeat-containing pr 27.9 3.1E+02 0.01 24.0 26.1 96 264-362 166-277 (357)
290 3cfw_A L-selectin; EGF, cell a 27.6 43 0.0015 27.2 3.4 16 209-228 139-154 (164)
291 3ssb_I IMPI alpha, inducible m 27.1 23 0.00079 20.9 1.1 20 210-230 5-24 (32)
292 4h5i_A Guanine nucleotide-exch 26.5 3.6E+02 0.012 24.4 15.1 94 264-359 221-327 (365)
293 3vl1_A 26S proteasome regulato 26.5 3.6E+02 0.012 24.4 33.7 251 39-336 104-365 (420)
294 1tl2_A L10, protein (tachylect 26.5 2E+02 0.0068 25.4 7.5 72 71-147 35-115 (236)
295 1kb0_A Quinohemoprotein alcoho 25.8 5.3E+02 0.018 26.1 15.0 16 80-95 396-411 (677)
296 2oaj_A Protein SNI1; WD40 repe 24.8 6.3E+02 0.021 26.5 12.8 96 263-363 18-117 (902)
297 1k8k_C P40, ARP2/3 complex 41 24.4 3.6E+02 0.012 23.7 27.0 111 32-145 52-170 (372)
298 3fby_A COMP, cartilage oligome 24.2 50 0.0017 33.0 3.5 35 180-228 25-59 (551)
299 1g1t_A E-selectin; EGF, adhesi 23.8 44 0.0015 26.8 2.7 16 209-228 139-154 (157)
300 1z68_A Fibroblast activation p 23.8 2.5E+02 0.0086 28.2 9.1 73 35-113 62-144 (719)
301 2p3f_N Anti-coagulant protein 23.5 29 0.001 25.0 1.3 20 210-229 47-66 (78)
302 2ad6_A Methanol dehydrogenase 23.0 5.5E+02 0.019 25.3 15.2 67 80-148 389-494 (571)
303 3qcw_A Neurexin-1-alpha; synap 22.0 82 0.0028 35.0 5.2 18 209-230 1037-1055(1245)
304 1pgu_A Actin interacting prote 22.0 5.3E+02 0.018 24.7 29.4 274 13-354 40-348 (615)
305 4ery_A WD repeat-containing pr 21.9 3.9E+02 0.013 23.1 37.0 112 33-147 24-137 (312)
306 4gqb_B Methylosome protein 50; 21.9 4.4E+02 0.015 23.7 26.8 73 34-108 129-201 (344)
307 3zwl_B Eukaryotic translation 21.6 4E+02 0.014 23.2 32.6 73 32-107 74-150 (369)
308 1w6s_A Methanol dehydrogenase 21.0 3.1E+02 0.01 27.6 8.9 17 346-362 394-410 (599)
No 1
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=4.2e-68 Score=556.82 Aligned_cols=365 Identities=23% Similarity=0.408 Sum_probs=319.0
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|+..++++...+..|++||+||.+|+||||||+..++|+|++|||+.+++++...+.+|+|||+|+.+++|||
T Consensus 108 I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~ 187 (619)
T 3s94_A 108 IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 187 (619)
T ss_dssp EEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred EEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEE
Confidence 56778889999999988999999999999999999999997789999999999999999888999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEcc-CCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEee
Q psy950 94 VDAKLDLIQKISYNGGNRQIIRR-NLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFD 172 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~~-~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~ 172 (407)
+|...++|++++++|..++.+.. .+.+|+||+++++.||||||.+++|.++++.+ | ....++..++..|++|+++|
T Consensus 188 aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~t-g--~~~~~i~~~~~~p~~i~v~~ 264 (619)
T 3s94_A 188 ADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYT-G--EGLREIHSDIFSPMDIHAFS 264 (619)
T ss_dssp EETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSS-C--CCCEECCSCCCCCSEEEECC
T ss_pred EeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCC-C--cccEEEecCCCCCcEEEEEc
Confidence 99999999999999999977764 78999999999999999999999999999987 3 35678888888999999999
Q ss_pred ecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc-cceeeeeecccceEEeecCCCC
Q psy950 173 IVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT-MDEYLVFSTRTEIRALHLDPTL 251 (407)
Q Consensus 173 ~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~-~~~~Ll~s~~~~I~~i~l~~~~ 251 (407)
+.+||. +.|||.. +||+|+|+|++.|.. .+|+|.||.||.|.+|+++|.. +++||||+.+..|++++++...
T Consensus 265 ~~~qp~-~~n~C~~-~ng~Cs~lCl~~~~~-----~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~ 337 (619)
T 3s94_A 265 QQRQPN-ATNPCGI-DNGGCSHLCLMSPVK-----PFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPD 337 (619)
T ss_dssp GGGSCC-CCCTTTT-TGGGCSSEEEECSST-----TSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTT
T ss_pred cccCCC-ccccccC-CCCcccceEECCCCC-----CCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCc
Confidence 999996 7899998 899999999998853 3699999999999999999994 7889999999999999998876
Q ss_pred CeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCC
Q psy950 252 TAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWA 327 (407)
Q Consensus 252 ~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~ 327 (407)
+.....++.++.++.|||||+.+++|||+|... .+|++++++|..... ++. .|+||||||++++|||||... +
T Consensus 338 ~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~-~~I~r~~~~g~~~~~v~~~~~~-~p~GlAvD~~~~~lY~tD~~~-~ 414 (619)
T 3s94_A 338 FTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEV-RAIRRSFIDGSGSQFVVTAQIA-HPDGIAVDWVARNLYWTDTGT-D 414 (619)
T ss_dssp CCCEECCCSCCSSEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTT-T
T ss_pred cceeEEeccccCccEEEEEEcCCCeEEEEeCCC-CeEEEEEcCCCccEEEEECCCC-CcCceEEecccCcEEEEeCCC-C
Confidence 655556778889999999999999999999988 899999999865432 566 999999999999999999999 8
Q ss_pred eEEEEECCCCcc--cc-cCCCceeEEEEcCCCCeEEEEeCCCCCcc--cccCCCCCCCcceeEEEeCCCcccee
Q psy950 328 KIAWIPTTNPSS--AS-SNLTNVVGVEFDYADDKILFTQIRPWAKI--AWIPTTNPSSASVNTILSRGKDEKAK 396 (407)
Q Consensus 328 ~I~v~~~~~~~r--l~-~~l~~P~~iavdp~~g~lywtd~~~~~~i--a~~dg~~~~~~~~~~l~~~~~~~~~~ 396 (407)
+|++++++|..+ +. +.+.+|++|||||.+|+||||||+..++| +.||| +.++.|...+..+|.-
T Consensus 415 ~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG-----~~~~~l~~~~l~~P~G 483 (619)
T 3s94_A 415 RIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG-----SDRVVLVNTSLGWPNG 483 (619)
T ss_dssp EEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS-----CSCEEEECSSCSCEEE
T ss_pred cEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC-----CccEEEEeCCCCCCee
Confidence 999999999865 43 58899999999999999999999988888 55555 4556555545555543
No 2
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=7.9e-68 Score=555.35 Aligned_cols=365 Identities=22% Similarity=0.395 Sum_probs=322.2
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|+.+++++...+.+|++||+||..|+||||||+..++|+|++|||+.+++++. ++.+|+|||+|+.+++|||
T Consensus 104 I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~ 182 (628)
T 4a0p_A 104 IEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYW 182 (628)
T ss_dssp EEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEE
T ss_pred EEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEE
Confidence 566778899889999889999999999999999999999867899999999999999986 7889999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeee
Q psy950 94 VDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDI 173 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~ 173 (407)
+|...++|++++++|..++++...+.+|+||++++++||||||.+++|.+++|.+ | ...+++..++..|++|+++|+
T Consensus 183 aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~t-g--~~~~~l~~~~~~p~~i~v~~~ 259 (628)
T 4a0p_A 183 TDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTS-G--QNRTIIQGHLDYVMDILVFHS 259 (628)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTT-C--CSCEEEECSCCSCCEEEEECG
T ss_pred EECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCC-C--CceEEEecCCCCcceeeeeee
Confidence 9999999999999999998877889999999999999999999999999999987 3 467888888899999999999
Q ss_pred cCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCe
Q psy950 174 VNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTA 253 (407)
Q Consensus 174 ~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~ 253 (407)
.+|| +.|||.. +||+|+|+|++.+.+ +|+|.||.||.|.+|+++|..+++||||+.+..|+++.++.....
T Consensus 260 ~~q~--~~n~C~~-~ng~C~~~C~~~~~~------~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~ 330 (628)
T 4a0p_A 260 SRQS--GWNECAS-SNGHCSHLCLAVPVG------GFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSP 330 (628)
T ss_dssp GGSC--CCCTTTT-TGGGCSSEEEEETTT------EEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCC
T ss_pred cccc--cceEecc-CCCCcchhhhcCCCC------CeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCc
Confidence 9998 6899998 899999999999842 799999999999999999999999999999999999999765443
Q ss_pred eeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----------cCCCCccEEEEeccCCeEEEEeC
Q psy950 254 VPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----------SNLTNVVGVEFDYADDKILFTQI 323 (407)
Q Consensus 254 ~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----------~~~~~~~glAvDwi~~~LYwtd~ 323 (407)
....++.+++++.|||||+.+++|||+|... .+|+++.++|..... .+. .|+||||||+++||||||.
T Consensus 331 ~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~-~~I~r~~~~g~~~~~v~~~~~~~~~~~~-~p~glAvD~~~~nLY~td~ 408 (628)
T 4a0p_A 331 DIILPIHSLRNVRAIDYDPLDKQLYWIDSRQ-NMIRKAQEDGSQGFTVVVSSVPSQNLEI-QPYDLSIDIYSRYIYWTCE 408 (628)
T ss_dssp CEECCCTTCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEEC--------CC-CEEEEEEETTTTEEEEEET
T ss_pred eEEEEehhcCCceEEEEecCCCeEEEEecCc-ceEEEEEcCCCCceEEEEcccccccccC-CcceEEeeccCCeEEEEcC
Confidence 4455778889999999999999999999998 899999999875321 234 8999999999999999999
Q ss_pred CCCCeEEEEECCCCcc--cc-cCCCceeEEEEcCCCCeEEEEeCCCCC-cccccCCCCCCCcceeEEEeCCCccceee
Q psy950 324 RPWAKIAWIPTTNPSS--AS-SNLTNVVGVEFDYADDKILFTQIRPWA-KIAWIPTTNPSSASVNTILSRGKDEKAKI 397 (407)
Q Consensus 324 ~~~~~I~v~~~~~~~r--l~-~~l~~P~~iavdp~~g~lywtd~~~~~-~ia~~dg~~~~~~~~~~l~~~~~~~~~~~ 397 (407)
.. ++|++++++|..+ +. ..+.+|++|||||.+|+||||||+..+ +| ...+|||+.++.|...+..+|..|
T Consensus 409 ~~-~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I---~r~~~dG~~~~~l~~~~l~~P~gl 482 (628)
T 4a0p_A 409 AT-NVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKI---ERAALDGTEREVLFFSGLSKPIAL 482 (628)
T ss_dssp TT-TEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEE---EEEETTSCSCEEEECSSCSCEEEE
T ss_pred CC-CEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeE---EEEeCCCCCcEEEEeccCCCccEE
Confidence 99 8999999999865 33 578999999999999999999998875 67 334455666676766666565444
No 3
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=1.5e-40 Score=321.25 Aligned_cols=206 Identities=30% Similarity=0.587 Sum_probs=187.2
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|...++++...+..|.+||+||..|+|||+|++..++|+|++|||+.+++++..++.+|+|||+|+.+++|||
T Consensus 103 I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~ 182 (318)
T 3sov_A 103 IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYW 182 (318)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEE
Confidence 55677788888888888899999999999999999999986679999999999999999888999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEee
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFD 172 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~ 172 (407)
+|...++|+++++||++++++. ..+.+|+||+++++.+||+||.+++|.++++.+ | .....+...+..|++|+++|
T Consensus 183 aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~-G--~~~~~i~~~~~~P~~i~v~~ 259 (318)
T 3sov_A 183 ADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYT-G--EGLREIHSDIFSPMDIHAFS 259 (318)
T ss_dssp EETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTT-C--CSCEEEECCCSSCCCEEEEC
T ss_pred EECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCC-C--CceEEEeCCCCCCcEEEEec
Confidence 9999999999999999998776 478999999999999999999999999999976 3 34567777788999999999
Q ss_pred ecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 173 IVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 173 ~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
+.+||. ..|||.. +||+|+|+|++.|.. .+|+|.||.||.|.+|+++|.+
T Consensus 260 ~~~q~~-~~n~C~~-~ng~Cs~~C~~~~~~-----~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 260 QQRQPN-ATNPCGI-DNGGCSHLCLMSPVK-----PFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp GGGSCC-CCCTTTT-TGGGCSSEEEECSST-----TSEEEECSTTCCBCTTSSCBCC
T ss_pred cccccc-ccccccc-CCCCcceEEecCCCC-----CCeEEECCCCCEECCCCCCCCC
Confidence 999996 6899987 899999999998863 3699999999999999999984
No 4
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=3e-39 Score=338.31 Aligned_cols=203 Identities=27% Similarity=0.535 Sum_probs=187.1
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|+.+++++..++.+|++||+||.+|+|||||++..++|+|++|||+++++++...+.+|+|||||+.+++|||
T Consensus 416 I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~ 495 (619)
T 3s94_A 416 IEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYW 495 (619)
T ss_dssp EEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEE
Confidence 56677889999999988999999999999999999999987789999999999999999888999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEee
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFD 172 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~ 172 (407)
+|...++|++++++|+.++++. ..+.+|+||++++++||||||.+++|+++++.+ | ..+++..++..|++|+++|
T Consensus 496 aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~-g---~~~~~~~~~~~~~~i~~~~ 571 (619)
T 3s94_A 496 GDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRS-A---EREVIIDQLPDLMGLKATN 571 (619)
T ss_dssp EETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSS-C---CEEEEECSCCCEEEEEEEE
T ss_pred EECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCC-C---ceEEEecCCCCCceeeecc
Confidence 9999999999999999998765 678999999999999999999999999999997 4 3577788899999999999
Q ss_pred ecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccc
Q psy950 173 IVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 173 ~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~ 230 (407)
+..|+ +.|+|.. +||+|+|+|++.++ +++|.||.||.|.+|+++|..|
T Consensus 572 ~~~~~--~~~~C~~-~ng~C~~~C~~~~~-------~~~C~C~~g~~l~~d~~~C~~p 619 (619)
T 3s94_A 572 VHRVI--GSNPCAE-ENGGCSHLCLYRPQ-------GLRCACPIGFELISDMKTCIVP 619 (619)
T ss_dssp SSCCC--CCCGGGS-GGGGCSSEEEEETT-------EEEEECCTTCEECSSTTCEECC
T ss_pred ccccc--ccccCCC-CCCChhHhhccCCC-------CeEEECCCCCEECCCCCcCCCC
Confidence 87765 7899998 89999999999987 5999999999999999999753
No 5
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=9e-39 Score=308.48 Aligned_cols=209 Identities=31% Similarity=0.583 Sum_probs=183.6
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+...+|...++++...+..|++||+||..|+|||+|++..++|+|+++||+.+++++...+.+|+|||+|+.+++|||
T Consensus 101 I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 101 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEE
Confidence 44556677777888877889999999999999999999986569999999999999998878899999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc---cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEE
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR---RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAI 170 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~---~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i 170 (407)
+|...++|++++++|++++++. ..+.+|+||+++++.|||+||.+++|.++++.+ | ...+++..++..|++|++
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~-g--~~~~~i~~~~~~p~~i~v 257 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT-G--SDVNLLAENLLSPEDMVL 257 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT-C--CCCEEEECSCSCCCCEEE
T ss_pred EECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCC-C--cceEEEecCCCCceEEEE
Confidence 9999999999999999988775 357899999999999999999999999999976 3 356677777889999999
Q ss_pred eeecCCCCCCCCCccCCC---cccccccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 171 FDIVNQPPDENNPCFRTG---NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 171 ~~~~~qp~~~~n~C~~~~---ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+.+||. ..|+|.. + ||+|+|+|++.|.... ...+|+|.||.||.|.+|+++|.
T Consensus 258 ~~~~~qp~-~~n~C~~-~~~~ng~Cs~~C~~~p~~~~-~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 258 FHNLTQPR-GVNWCER-TTLSNGGCQYLCLPAPQINP-HSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp ESGGGSCC-CCCTTSS-SSSGGGGCSSEEEECCCCST-TCCSEEEECCTTCEECTTSSCEE
T ss_pred eccccCCc-ccccccc-cccCCCCcCcccCCCccccC-CCCCeEeeCCCCCEECCCCCccC
Confidence 99999997 7899997 7 9999999999874210 11369999999999999999995
No 6
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-39 Score=315.58 Aligned_cols=203 Identities=31% Similarity=0.564 Sum_probs=185.0
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|...++++...+..|.+||+||..|+|||+|++..++|+|++|||+.+++++..++.+|+|||+|+.+++|||
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~ 219 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYW 219 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEE
Confidence 45667788888888888899999999999999999999987569999999999999998888999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEee
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFD 172 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~ 172 (407)
+|...++|++++++|++++.+. ..+.+|+||+++++.|||+||.+++|.++++.. | ...+++..++..|++|+++|
T Consensus 220 aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~-G--~~~~~i~~~~~~p~gi~v~~ 296 (349)
T 3v64_C 220 VDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFT-G--KNQEIIRNKLHFPMDIHTLH 296 (349)
T ss_dssp EETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTT-C--CSCEEEECSCSCCCCEEEEC
T ss_pred EECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccC-C--CccEEeccCCCCCceEEEEc
Confidence 9999999999999999887655 568999999999999999999999999999876 3 35677777889999999999
Q ss_pred ecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 173 IVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 173 ~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
+.+||. ..|||.. +||+|+|||++.|. +++|+||.||. ..|+++|..
T Consensus 297 ~~~qp~-~~n~C~~-~~g~C~~lCl~~~~-------~~~C~C~~g~~-~~d~~~C~~ 343 (349)
T 3v64_C 297 PQRQPA-GKNRCGD-NNGGCTHLCLPSGQ-------NYTCACPTGFR-KINSHACAL 343 (349)
T ss_dssp GGGSCC-CCCTTTT-GGGGCSSEEECCTT-------SCEEECCTTEE-EETTTEEEE
T ss_pred cccCcc-ccCcccC-CCCCcccEeecCCC-------CCeeECCCCCc-CCCCCcccc
Confidence 999997 7999998 89999999999886 59999999999 899999974
No 7
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.1e-38 Score=317.75 Aligned_cols=211 Identities=31% Similarity=0.570 Sum_probs=187.0
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|...++++...+..|++|||||..|+|||+|++..++|+|++|||+.+++++..++.+|+|||+|+.+++|||
T Consensus 183 I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp EEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEE
Confidence 45677788888899988999999999999999999999987679999999999999999888999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc---cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEE
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR---RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAI 170 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~---~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i 170 (407)
+|...++|++++++|..++++. ..+.+|+||+++++.|||+||.+++|.++++.+ | ....++..++..|++|++
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~-G--~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT-G--SDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSS-C--CCCEEEECSCSCEEEEEE
T ss_pred EECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCC-C--CceEEEecCCCCCceEEE
Confidence 9999999999999999998776 358999999999999999999999999999886 3 356777788899999999
Q ss_pred eeecCCCCCCCCCccC--CCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 171 FDIVNQPPDENNPCFR--TGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 171 ~~~~~qp~~~~n~C~~--~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
+|+.+||. ..|||.. .+||+|+|+|++.|... ..+.+|+|+||.||.|.+|+++|..
T Consensus 340 ~~~~~qp~-~~n~c~~~~~~ng~C~~lC~~~~~~~-~~~~~~~C~C~~g~~l~~d~~~C~~ 398 (400)
T 3p5b_L 340 FHNLTQPR-GVNWCERTTLSNGGCQYLCLPAPQIN-PHSPKFTCACPDGMLLARDMRSCLT 398 (400)
T ss_dssp ESGGGSCC-CCCSSSSSSSGGGGCSSEEEECCCSS-TTCCSEEEECCTTCEECTTSSSEES
T ss_pred EeeccCCC-CCCccccccCCCcCcCCeecCCCccc-CCCCCeeEECCCCCEECCCCCccCC
Confidence 99999997 7899962 26899999999987521 0123699999999999999999963
No 8
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=4.4e-39 Score=337.37 Aligned_cols=206 Identities=21% Similarity=0.434 Sum_probs=187.3
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCC-eEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYP-RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVY 92 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~-~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lY 92 (407)
|.+..++|+.+++++...+.+|++|||||.+|+|||||++..+ +|+|++|||+++++|++.++.+|+|||+|+.+++||
T Consensus 413 I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LY 492 (628)
T 4a0p_A 413 INVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLF 492 (628)
T ss_dssp EEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEE
Confidence 5677788998889998899999999999999999999998765 899999999999999998899999999999999999
Q ss_pred EEeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEe
Q psy950 93 WVDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIF 171 (407)
Q Consensus 93 w~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~ 171 (407)
|+|...++|+++++||++++++. ..+.+|+||++++++|||+||...+|++++|.+ | ...+++..++..|++|.++
T Consensus 493 w~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~-G--~~~~~i~~~~~~~~~i~~~ 569 (628)
T 4a0p_A 493 WADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTG-R--EGRTKVQARIAQLSDIHAV 569 (628)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTS-S--SCCEEEECCCTTEEEEEEE
T ss_pred EEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcC-C--CCcEEEeccCCCCcceEEE
Confidence 99999999999999999998887 678999999999999999999999999999996 3 4577788888899999999
Q ss_pred eecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 172 DIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 172 ~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
|...|+....|||.. +||+|+|+|++.+.+ .++|.||.||.|.+|+++|.+
T Consensus 570 ~~~~~~~~~~n~c~~-~ng~C~~~C~~~~~~------~~~C~C~~g~~l~~d~~~~~~ 620 (628)
T 4a0p_A 570 KELNLQEYRQHPCAQ-DNGGCSHICLVKGDG------TTRCSCPMHLVLLQDELSCGG 620 (628)
T ss_dssp CCCCHHHHHHSTTTT-GGGGCSSEEEECTTS------CEEEECCTTEEECTTSSCEEE
T ss_pred eecccCccccccCCC-CCCCcchhcccCCCC------CeeeeCCCCCEECCCCCcCCC
Confidence 876653336799987 899999999998764 689999999999999999974
No 9
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=5e-38 Score=311.62 Aligned_cols=202 Identities=31% Similarity=0.569 Sum_probs=184.8
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|+..++++..++..|.+||+||..|+|||+|++..++|+|+++||+.+++++..++.+|+|||+|+.+++|||
T Consensus 183 I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~ 262 (386)
T 3v65_B 183 IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYW 262 (386)
T ss_dssp EEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEE
T ss_pred EEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEE
Confidence 45667788888889988999999999999999999999987569999999999999999888999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEee
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFD 172 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~ 172 (407)
+|...++|++++++|+.++.+. ..+.+|+||+++++.|||+||.+++|.++++.. | ...+++..++..|++|+++|
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~-G--~~~~~i~~~~~~p~gi~v~~ 339 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFT-G--KNQEIIRNKLHFPMDIHTLH 339 (386)
T ss_dssp EETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTT-C--CSCEEEECSCSCCCCEEEES
T ss_pred EECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCC-C--cceEEEccCCCCCceEEEEc
Confidence 9999999999999999887655 568899999999999999999999999999876 3 35677778889999999999
Q ss_pred ecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 173 IVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 173 ~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
+.+||. ..|||.. +||+|+|||++.|. +|+|+||.||. ..|+++|.
T Consensus 340 ~~~q~~-~~n~C~~-~ng~C~~lCl~~~~-------~~~C~C~~g~~-~~d~~~C~ 385 (386)
T 3v65_B 340 PQRQPA-GKNRCGD-NNGGCTHLCLPSGQ-------NYTCACPTGFR-KINSHACA 385 (386)
T ss_dssp GGGSCC-CCCTTTT-SCTTSSSEEECCSS-------SCEEECCTTCB-CSSSSCCB
T ss_pred hhcCcC-CcCcccc-CCCCCCceeeeCCC-------CCeeECCCCCc-CCCCCccC
Confidence 999997 7999998 89999999999886 59999999999 89999996
No 10
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=332.30 Aligned_cols=211 Identities=31% Similarity=0.582 Sum_probs=189.4
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|+..++++...+..|++|||||..|+|||||++..++|+|++|||+.+++++..++.+|+|||||+.+++|||
T Consensus 495 I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYw 574 (791)
T 3m0c_C 495 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 574 (791)
T ss_dssp EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEE
Confidence 56677888999999999999999999999999999999997679999999999999999988999999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc---cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEE
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR---RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAI 170 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~---~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i 170 (407)
+|...++|++++++|..++++. ..+.+|+||++++++|||+||.+++|+++++.+ | ...+++..++..|++|+|
T Consensus 575 aD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~t-G--~~~~~l~~~l~~P~~i~v 651 (791)
T 3m0c_C 575 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT-G--SDVNLLAENLLSPEDMVL 651 (791)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT-C--CCCEEEECSCSCCCCEEE
T ss_pred EeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCC-C--cceEEeecCCCCceeEee
Confidence 9999999999999999998776 358899999999999999999999999999987 3 356777888999999999
Q ss_pred eeecCCCCCCCCCccC--CCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 171 FDIVNQPPDENNPCFR--TGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 171 ~~~~~qp~~~~n~C~~--~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
||+.+||. ..|||.. .+||+|+|||++.|...+ .+.+|+|+||.||.|.+|+++|..
T Consensus 652 ~h~~~Qp~-~~N~C~~~~~~ng~CshlCl~~p~~~~-~~~~~~C~Cp~g~~L~~d~~tC~~ 710 (791)
T 3m0c_C 652 FHNLTQPR-GVNWCERTTLSNGGCQYLCLPAPQINP-HSPKFTCACPDGMLLARDMRSCLT 710 (791)
T ss_dssp ESGGGSCC-CCCTTTSSSSGGGGCSSEEEECCCCST-TCCSEEEECCTTCEECTTSSCEEC
T ss_pred eccccCCC-CCCcccccCCCCcCcCeeecCCCCcCC-CCCCceeECCCCCEECCCCCcCCC
Confidence 99999997 7899974 268999999999875210 123699999999999999999983
No 11
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1.3e-34 Score=307.50 Aligned_cols=210 Identities=31% Similarity=0.587 Sum_probs=184.2
Q ss_pred EeeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 14 IRLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
|.+..++|...++++...+..|++|||||..|+|||+|++..++|+|++|||+.+++++...+.+|+|||+|+.+++|||
T Consensus 477 I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEE
Confidence 45556677777888887889999999999999999999986569999999999999988878899999999999999999
Q ss_pred EeCCCCeEEEEecCCCeEEEEc---cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEE
Q psy950 94 VDAKLDLIQKISYNGGNRQIIR---RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAI 170 (407)
Q Consensus 94 ~d~~~~~I~~~~~dG~~~~~~~---~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i 170 (407)
+|...++|++++++|.+++++. ..+.+|+||+++++.|||+||..++|.++++.+ | ...+++..++..|++|+|
T Consensus 557 aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~-G--~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT-G--SDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp EETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTT-E--EEEECCCTTCSSCCCCCB
T ss_pred EecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccC-C--CceEEeecCCCCCcEEEE
Confidence 9999999999999999988776 357899999999999999999999999999976 2 456667667889999999
Q ss_pred eeecCCCCCCCCCccCCC---cccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 171 FDIVNQPPDENNPCFRTG---NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 171 ~~~~~qp~~~~n~C~~~~---ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
+|+.+||. ..|||.. + ||+|+|||+++|.... .+.+|+|+||.||.|.+|+++|..
T Consensus 634 ~~~~~qp~-~~n~C~~-~~~~ng~Cs~lCl~~p~~~~-~~~~~~C~Cp~g~~l~~d~~~C~~ 692 (699)
T 1n7d_A 634 FHQLTQPR-GVNWCER-TTLSNGGCQYLCLPAPQINP-HSPKFTCACPDGMLLARDMRSCLT 692 (699)
T ss_dssp CSSSSSCC-SCCSSCS-SSCSSCSCTTCCBCCCCCTT-CSCSCBCCCCSSCEECSSTTCEEC
T ss_pred eCcccCCC-CCCCccc-cCCCCCCCCcccCcCcccCC-CCCCcEEECcCCCEECCCCCccCC
Confidence 99999997 7899997 6 8999999998874211 123699999999999999999974
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.98 E-value=1.4e-31 Score=261.66 Aligned_cols=195 Identities=16% Similarity=0.282 Sum_probs=154.8
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc--ccceeeeeecccceEEeecCCCCCeeeeEee
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT--TMDEYLVFSTRTEIRALHLDPTLTAVPFKTV 259 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~--~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~ 259 (407)
|+|. ++++|+|+|++.++ +|+|.|+.||.|.+|+++|. .++++|+|+.+..|+++.++..... ..+
T Consensus 2 ~ec~--~~~~C~~~C~n~~g-------~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~---~~~ 69 (349)
T 3v64_C 2 NECA--EEGYCSQGCTNSEG-------AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYT---LLL 69 (349)
T ss_dssp ---------CCSSEECCC----------CCEECCTTEEECTTSSCEEESSSCCEEEEECBSCEEEECTTSCCEE---EEE
T ss_pred cccC--CCCCCcCeeecCCC-------CeEEECCCCccCCCCCCcccccccCceeEeecccceEEEeCCCCeeE---Eee
Confidence 6897 47999999999987 59999999999999999998 4678999999999999998765432 245
Q ss_pred cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECC
Q psy950 260 SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT 335 (407)
Q Consensus 260 ~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~ 335 (407)
..+.++.++++|+.+++|||+|... ++|+++++++..... ++. .|.|||+||.+++|||+|... ++|++++++
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~-~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g~ly~~d~~~-~~I~~~~~d 146 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTL-DRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGT-SRIEVANLD 146 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTT-TEEEEEETT
T ss_pred cCCCceEEEEEeccccEEEEEeccC-CceEEEecCCCCceEEEeCCCC-CccEEEEecCCCeEEEEcCCC-CeEEEEcCC
Confidence 6778899999999999999999998 899999999875432 556 899999999999999999999 899999999
Q ss_pred CCcc--cc-cCCCceeEEEEcCCCCeEEEEeCCCCCcccccCCCCCCCcceeEEEeCCCccc
Q psy950 336 NPSS--AS-SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASVNTILSRGKDEK 394 (407)
Q Consensus 336 ~~~r--l~-~~l~~P~~iavdp~~g~lywtd~~~~~~ia~~dg~~~~~~~~~~l~~~~~~~~ 394 (407)
|..+ +. ..+..|++|||||..|+|||+||+..++| ...+++|+.++.+...+..+|
T Consensus 147 G~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I---~r~~~dG~~~~~~~~~~~~~P 205 (349)
T 3v64_C 147 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI---EASSMDGSGRRIIADTHLFWP 205 (349)
T ss_dssp SCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEE---EEEETTSCSCEESCCSSCSCE
T ss_pred CCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEE---EEEeCCCCCcEEEEECCCCCc
Confidence 9864 33 57899999999999999999999887777 223444555555544444444
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.97 E-value=1.2e-29 Score=252.63 Aligned_cols=199 Identities=20% Similarity=0.320 Sum_probs=163.1
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc--ccceeeeeecccceEEeecCCCCCeeeeE
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT--TMDEYLVFSTRTEIRALHLDPTLTAVPFK 257 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~--~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~ 257 (407)
..++|.. .+.|+|.|.+.++ +|+|.|+.||.+.+++++|. .+++||+|+.+..|+++.++......
T Consensus 39 dideC~~--~~~C~~~C~n~~g-------~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~I~~i~l~~~~~~~--- 106 (400)
T 3p5b_L 39 DIDECQD--PDTCSQLCVNLEG-------GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTS--- 106 (400)
T ss_dssp ECCCCST--TSSCSSCCBCCSS-------SCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTEEEEECTTSCSCEE---
T ss_pred Cchhhhc--cCCCCCccCCCcc-------ceeeeccccccccccccceeeccccceeEEeccceeEEEccCCcceeE---
Confidence 5689974 5789999999877 59999999999999999998 46789999999999999998765443
Q ss_pred eecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc----ccc----cCCCCccEEEEeccCCeEEEEeCCCCCeE
Q psy950 258 TVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS----SAS----SNLTNVVGVEFDYADDKILFTQIRPWAKI 329 (407)
Q Consensus 258 ~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~----~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I 329 (407)
.+..+.++.||+||+.+++|||+|... .+|+++.+++.. ... ++. .|.||||||++++|||+|... ++|
T Consensus 107 ~~~~~~~~~~l~~d~~~~~lywsD~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~glavD~~~~~lY~~d~~~-~~I 183 (400)
T 3p5b_L 107 LIPNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVL-GTV 183 (400)
T ss_dssp EECSCSCEEEEEEETTTTEEEEEETTT-TEEEEEEC------CCCEEEECSSCS-CEEEEEEETTTTEEEEEETTT-TEE
T ss_pred eccccCcceEEeeeeccCceEEEecCC-CeEEEEEcccCCCCCcceEEEeCCCC-CcccEEEEecCCceEEEECCC-CeE
Confidence 346778899999999999999999998 899999998732 211 556 899999999999999999999 899
Q ss_pred EEEECCCCcc--c-ccCCCceeEEEEcCCCCeEEEEeCCCCCcccccCCCCCCCcceeEEEeCCCcccee
Q psy950 330 AWIPTTNPSS--A-SSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASVNTILSRGKDEKAK 396 (407)
Q Consensus 330 ~v~~~~~~~r--l-~~~l~~P~~iavdp~~g~lywtd~~~~~~ia~~dg~~~~~~~~~~l~~~~~~~~~~ 396 (407)
++++++|..+ + ...+..|++|||||..|+|||+||+..++| ...+++|+.++.|...+..+|.-
T Consensus 184 ~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I---~~~~~dG~~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 184 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI---KKGGLNGVDIYSLVTENIQWPNG 250 (400)
T ss_dssp EEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCE---EEEETTSCSCEEEECSSCSCEEE
T ss_pred EEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEE---EEEeCCCCccEEEEECCCCceEE
Confidence 9999999864 3 358899999999999999999999887777 23345566666666555555543
No 14
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.96 E-value=5.7e-28 Score=233.15 Aligned_cols=240 Identities=18% Similarity=0.281 Sum_probs=193.7
Q ss_pred CccEEEEEEeeeeecC----Cc-ceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCe-EEEEeCCCCCc
Q psy950 6 ALASLIWAIRLALRLL----KK-KKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKW-TSIVSNGISMP 79 (407)
Q Consensus 6 ~~~~~~~s~~~~~~~~----~~-~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~-~~l~~~~~~~P 79 (407)
++|+||||.+..++.. .. ...++..++..|.+|++|+..+.|||+|.... +|.|++++|+.. +.++..++..|
T Consensus 3 ~~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~-~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 3 SAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEE-AIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp -CCEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTT-EEEEEETTSSSCCCEEEEECCSCC
T ss_pred CccEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCC-cEEEEEccCCCceEEEEcCCCCCc
Confidence 6899999998766544 22 34566667888999999999999999999875 999999999863 45666678899
Q ss_pred eeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeC--CEEEEEeCC-CCeEEEEecCCCCCCccc
Q psy950 80 RDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHK--SDVYWVDRN-LRTVYKASKLASTNITLP 155 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~--~~lYwtd~~-~~~I~~~~~~~~g~~~~~ 155 (407)
.|||+|+.+++|||+|...++|++++++|..++++. ..+..|.||+++. +.|||+||. ..+|+++++++ . ..
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~--~~ 157 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--S--SR 157 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS--C--SC
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC--C--Ce
Confidence 999999999999999999999999999999887766 7789999999984 899999986 56888888775 1 11
Q ss_pred EEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeee
Q psy950 156 TPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLV 235 (407)
Q Consensus 156 ~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll 235 (407)
+++..
T Consensus 158 ~~~~~--------------------------------------------------------------------------- 162 (318)
T 3sov_A 158 FIIIN--------------------------------------------------------------------------- 162 (318)
T ss_dssp EEEEC---------------------------------------------------------------------------
T ss_pred EEEEE---------------------------------------------------------------------------
Confidence 11100
Q ss_pred eecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEE
Q psy950 236 FSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEF 311 (407)
Q Consensus 236 ~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAv 311 (407)
..+..+.+|++|+.+++|||+|... .+|.+++++|..... .+. .|.|||+
T Consensus 163 ------------------------~~l~~Pnglavd~~~~~lY~aD~~~-~~I~~~d~dG~~~~~~~~~~~~-~P~glav 216 (318)
T 3sov_A 163 ------------------------SEIYWPNGLTLDYEEQKLYWADAKL-NFIHKSNLDGTNRQAVVKGSLP-HPFALTL 216 (318)
T ss_dssp ------------------------SSCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEECSCCS-CEEEEEE
T ss_pred ------------------------CCCCCccEEEEeccCCEEEEEECCC-CEEEEEcCCCCceEEEecCCCC-CceEEEE
Confidence 0012245788999999999999988 899999999876543 455 9999999
Q ss_pred eccCCeEEEEeCCCCCeEEEEECC-CCc-c-cccCCCceeEEEEcC
Q psy950 312 DYADDKILFTQIRPWAKIAWIPTT-NPS-S-ASSNLTNVVGVEFDY 354 (407)
Q Consensus 312 Dwi~~~LYwtd~~~~~~I~v~~~~-~~~-r-l~~~l~~P~~iavdp 354 (407)
| .+.|||+|... ++|.+++.. |.. + +...+.+|.+|+|.-
T Consensus 217 ~--~~~lywtd~~~-~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~ 259 (318)
T 3sov_A 217 F--EDILYWTDWST-HSILACNKYTGEGLREIHSDIFSPMDIHAFS 259 (318)
T ss_dssp E--TTEEEEEETTT-TEEEEEETTTCCSCEEEECCCSSCCCEEEEC
T ss_pred e--CCEEEEEecCC-CeEEEEECCCCCceEEEeCCCCCCcEEEEec
Confidence 8 78999999999 899999984 543 2 556789999999843
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.96 E-value=7.4e-28 Score=238.49 Aligned_cols=251 Identities=19% Similarity=0.282 Sum_probs=201.1
Q ss_pred CCccEEEEEEeeeeecCC---cceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCcee
Q psy950 5 LALASLIWAIRLALRLLK---KKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRD 81 (407)
Q Consensus 5 ~~~~~~~~s~~~~~~~~~---~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~g 81 (407)
.++|+|+|+.+..++... .....+...+..|.+|++|+..++|||+|.... +|.|.+++|+..+.++..++..|.|
T Consensus 85 ~~~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~g 163 (386)
T 3v65_B 85 GPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGG 163 (386)
T ss_dssp SSCCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCCEEEEECSSCSCCCC
T ss_pred cccceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCC-cEEEEecCCCCcEEEEeCCCCCccE
Confidence 357899999776544332 233445567889999999999999999999865 9999999999998888888889999
Q ss_pred EEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEe--CCEEEEEeCCC-CeEEEEecCCCCCCcccEE
Q psy950 82 LTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVH--KSDVYWVDRNL-RTVYKASKLASTNITLPTP 157 (407)
Q Consensus 82 laiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~--~~~lYwtd~~~-~~I~~~~~~~~g~~~~~~~ 157 (407)
||+|+.+++|||+|...++|++++++|..++++. ..+..|.||+++ ++.|||+||.. ++|++++.++ . ..++
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~--~~~~ 239 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--S--GRRI 239 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--C--SCEE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC--C--CcEE
Confidence 9999999999999999999999999999887665 578999999998 48999999988 7899988775 1 1111
Q ss_pred cccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeee
Q psy950 158 IRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFS 237 (407)
Q Consensus 158 i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s 237 (407)
+..
T Consensus 240 ~~~----------------------------------------------------------------------------- 242 (386)
T 3v65_B 240 IAD----------------------------------------------------------------------------- 242 (386)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred EEE-----------------------------------------------------------------------------
Confidence 100
Q ss_pred cccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEec
Q psy950 238 TRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDY 313 (407)
Q Consensus 238 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDw 313 (407)
..+..+.+|++|+.+++|||+|... .+|.+++++|..... ++. .|.|||+|
T Consensus 243 ----------------------~~~~~PnGlavd~~~~~lY~aD~~~-~~I~~~d~dG~~~~~~~~~~~~-~P~giav~- 297 (386)
T 3v65_B 243 ----------------------THLFWPNGLTIDYAGRRMYWVDAKH-HVIERANLDGSHRKAVISQGLP-HPFAITVF- 297 (386)
T ss_dssp ----------------------SSCSCEEEEEEEGGGTEEEEEETTT-TEEEEECTTSCSCEEEECSSCS-SEEEEEEE-
T ss_pred ----------------------CCCCCeeeEEEeCCCCEEEEEECCC-CEEEEEeCCCCeeEEEEECCCC-CceEEEEE-
Confidence 0012245788999999999999998 899999999876443 566 99999996
Q ss_pred cCCeEEEEeCCCCCeEEEEE-CCCCcc--cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 314 ADDKILFTQIRPWAKIAWIP-TTNPSS--ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 314 i~~~LYwtd~~~~~~I~v~~-~~~~~r--l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
.++|||+|... ++|.+++ .+|..+ +...+.+|.+|++....+..+.+++
T Consensus 298 -~~~ly~td~~~-~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~~~~n~ 349 (386)
T 3v65_B 298 -EDSLYWTDWHT-KSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNR 349 (386)
T ss_dssp -TTEEEEEETTT-TEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSCCCCCT
T ss_pred -CCEEEEeeCCC-CeEEEEECCCCcceEEEccCCCCCceEEEEchhcCcCCcCc
Confidence 78999999999 8999998 566543 5568899999999765544443443
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.96 E-value=7.3e-27 Score=225.07 Aligned_cols=240 Identities=18% Similarity=0.258 Sum_probs=187.9
Q ss_pred ccEEEEEEeeeeecCC---cceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCC----CCeEEEEeCCCCCc
Q psy950 7 LASLIWAIRLALRLLK---KKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDG----SKWTSIVSNGISMP 79 (407)
Q Consensus 7 ~~~~~~s~~~~~~~~~---~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG----~~~~~l~~~~~~~P 79 (407)
||+||||.+..++... .....+...+.+|.++++|+..++|||+|.... +|.|.+++| +..+.++..++..|
T Consensus 1 ~~~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~-~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp CCEEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTT-EEEEEEC--------CEEEECSSCSCC
T ss_pred CCEEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCC-cEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 7999999986654432 122334456889999999999999999999865 999999998 66677776677899
Q ss_pred eeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeC--CEEEEEeCCC-CeEEEEecCCCCCCccc
Q psy950 80 RDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHK--SDVYWVDRNL-RTVYKASKLASTNITLP 155 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~--~~lYwtd~~~-~~I~~~~~~~~g~~~~~ 155 (407)
.|||+|+.+++|||+|...++|++++++|..++++. ..+..|.+|+++. +.|||+|+.. ++|++++.++ . ..
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~--~~ 155 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--V--DI 155 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--C--CE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--C--Ce
Confidence 999999999999999999999999999999887665 4788999999984 8999999986 6888888765 1 11
Q ss_pred EEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeee
Q psy950 156 TPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLV 235 (407)
Q Consensus 156 ~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll 235 (407)
+++. .
T Consensus 156 ~~~~------------~--------------------------------------------------------------- 160 (316)
T 1ijq_A 156 YSLV------------T--------------------------------------------------------------- 160 (316)
T ss_dssp EEEE------------C---------------------------------------------------------------
T ss_pred EEEE------------E---------------------------------------------------------------
Confidence 1110 0
Q ss_pred eecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc------cCCCCccEE
Q psy950 236 FSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS------SNLTNVVGV 309 (407)
Q Consensus 236 ~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~------~~~~~~~gl 309 (407)
..+..+.+|++|+.+++|||+|... .+|.+++++|..... .+. .|.||
T Consensus 161 ------------------------~~~~~P~gla~d~~~~~lY~~D~~~-~~I~~~d~dg~~~~~~~~~~~~~~-~P~gi 214 (316)
T 1ijq_A 161 ------------------------ENIQWPNGITLDLLSGRLYWVDSKL-HSISSIDVNGGNRKTILEDEKRLA-HPFSL 214 (316)
T ss_dssp ------------------------SSCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEEECTTTTS-SEEEE
T ss_pred ------------------------CCCCCceEEEEeccCCEEEEEECCC-CeEEEEecCCCceEEEeecCCccC-CcEEE
Confidence 0112346788999999999999988 899999999865443 245 89999
Q ss_pred EEeccCCeEEEEeCCCCCeEEEEEC-CCCcc--cccCCCceeEEEEcCC
Q psy950 310 EFDYADDKILFTQIRPWAKIAWIPT-TNPSS--ASSNLTNVVGVEFDYA 355 (407)
Q Consensus 310 AvDwi~~~LYwtd~~~~~~I~v~~~-~~~~r--l~~~l~~P~~iavdp~ 355 (407)
|+| .++|||+|... ++|.+++. +|... +..++..|.+|+++..
T Consensus 215 av~--~~~ly~~d~~~-~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~ 260 (316)
T 1ijq_A 215 AVF--EDKVFWTDIIN-EAIFSANRLTGSDVNLLAENLLSPEDMVLFHN 260 (316)
T ss_dssp EEE--TTEEEEEETTT-TEEEEEETTTCCCCEEEECSCSCCCCEEEESG
T ss_pred EEE--CCEEEEEECCC-CeEEEEeCCCCcceEEEecCCCCceEEEEecc
Confidence 998 69999999999 89999997 45432 5567889999988743
No 17
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.96 E-value=2.9e-28 Score=260.61 Aligned_cols=200 Identities=20% Similarity=0.315 Sum_probs=162.1
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc--ccceeeeeecccceEEeecCCCCCeeeeE
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT--TMDEYLVFSTRTEIRALHLDPTLTAVPFK 257 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~--~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~ 257 (407)
..++|.. ++.|+|+|++.++ +|+|.|+.||.|.+++++|+ +..++|+|+++..|+++.++...+..
T Consensus 351 dideC~~--~~~C~~~C~n~~g-------sy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~Ir~i~l~~~~~~~--- 418 (791)
T 3m0c_C 351 DIDECQD--PDTCSQLCVNLEG-------GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTS--- 418 (791)
T ss_dssp CCCCCSS--SSSCTTTCCBCSS-------CBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSSEEEECTTSCCCEE---
T ss_pred cCcccCC--CCCCCCeeecCCC-------CceeecCCCCEeCCCCceeeecccccccccccccceeEeeccCCccee---
Confidence 3567753 5677777777765 69999999999999999998 45679999999999999998765433
Q ss_pred eecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc----cc--c--cCCCCccEEEEeccCCeEEEEeCCCCCeE
Q psy950 258 TVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS----SA--S--SNLTNVVGVEFDYADDKILFTQIRPWAKI 329 (407)
Q Consensus 258 ~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~----~~--~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I 329 (407)
.+..+..+.||+||+.+++|||+|... .+|+++.+++.. .. . ++. .|.||||||++++|||+|... ++|
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~-~~I~~~~l~g~~~~~~~~~vi~~~l~-~P~GLAvD~~~~~LY~tD~~~-~~I 495 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVL-GTV 495 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEEECSSCS-CCCEEEEETTTTEEEEEETTT-TEE
T ss_pred eecCCCceEEEeecccCCeeEEeeccc-eeEEEEeccCCCCCcceeEEEecCCC-CcceeeeeecCCcEEEEecCC-CeE
Confidence 345678899999999999999999998 899999998742 11 1 556 999999999999999999999 899
Q ss_pred EEEECCCCcc--cc-cCCCceeEEEEcCCCCeEEEEeCCCCCcccccCCCCCCCcceeEEEeCCCccceee
Q psy950 330 AWIPTTNPSS--AS-SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASVNTILSRGKDEKAKI 397 (407)
Q Consensus 330 ~v~~~~~~~r--l~-~~l~~P~~iavdp~~g~lywtd~~~~~~ia~~dg~~~~~~~~~~l~~~~~~~~~~~ 397 (407)
++++++|..+ +. ..+..|+||||||.+|+||||||+..++| ...+|+|+.++.|...++.+|..|
T Consensus 496 ~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I---~~~~~dG~~~~~lv~~~l~~P~GL 563 (791)
T 3m0c_C 496 SVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI---KKGGLNGVDIYSLVTENIQWPNGI 563 (791)
T ss_dssp EEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE---EEEETTSCCEEEEECSSCSCEEEE
T ss_pred EEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeE---EEEecCCCceEEEEeCCCCCceEE
Confidence 9999999865 33 58899999999999999999999987877 234556677777777676666554
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.93 E-value=5.6e-23 Score=192.16 Aligned_cols=241 Identities=17% Similarity=0.303 Sum_probs=184.7
Q ss_pred ccEEEEEEe----eeeecCCcce-----EEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCC
Q psy950 7 LASLIWAIR----LALRLLKKKK-----KLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS 77 (407)
Q Consensus 7 ~~~~~~s~~----~~~~~~~~~~-----~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~ 77 (407)
+|+|+||.. +..++++..+ .++.....+|.++++|+..++|||+|.... +|.+.+++|...+.++..++.
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEP-SIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTT-EEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCC-EEEEEecCCCCcEEEEECCCC
Confidence 578999654 3444554322 234434567999999999999999999865 999999999988887776778
Q ss_pred CceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeC--CEEEEEeCC--CCeEEEEecCCCCCC
Q psy950 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHK--SDVYWVDRN--LRTVYKASKLASTNI 152 (407)
Q Consensus 78 ~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~--~~lYwtd~~--~~~I~~~~~~~~g~~ 152 (407)
.|.+|++|+.+++|||+|...++|.+++++|..++.+. ..+..|.+|+++. +.|||+++. .++|++++.++ .
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~- 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--T- 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--C-
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--C-
Confidence 99999999999999999999999999999998776655 4568999999984 899999986 45666666543 0
Q ss_pred cccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccce
Q psy950 153 TLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE 232 (407)
Q Consensus 153 ~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~ 232 (407)
..+++.
T Consensus 157 -~~~~~~------------------------------------------------------------------------- 162 (267)
T 1npe_A 157 -NRRILA------------------------------------------------------------------------- 162 (267)
T ss_dssp -CCEEEE-------------------------------------------------------------------------
T ss_pred -CcEEEE-------------------------------------------------------------------------
Confidence 000000
Q ss_pred eeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc---cCCCCccEE
Q psy950 233 YLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS---SNLTNVVGV 309 (407)
Q Consensus 233 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~---~~~~~~~gl 309 (407)
. ..+..+.++++|+.+++|||+|... ++|.+++.++..... ... .|.||
T Consensus 163 ----------------~----------~~~~~P~gia~d~~~~~lyv~d~~~-~~I~~~~~~g~~~~~~~~~~~-~P~gi 214 (267)
T 1npe_A 163 ----------------Q----------DNLGLPNGLTFDAFSSQLCWVDAGT-HRAECLNPAQPGRRKVLEGLQ-YPFAV 214 (267)
T ss_dssp ----------------C----------TTCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTEEEEEEEEECCC-SEEEE
T ss_pred ----------------E----------CCCCCCcEEEEcCCCCEEEEEECCC-CEEEEEecCCCceEEEecCCC-CceEE
Confidence 0 0112356788898899999999998 899999998764433 445 89999
Q ss_pred EEeccCCeEEEEeCCCCCeEEEEECCCCcc---cccC-CCceeEEEEcCCC
Q psy950 310 EFDYADDKILFTQIRPWAKIAWIPTTNPSS---ASSN-LTNVVGVEFDYAD 356 (407)
Q Consensus 310 AvDwi~~~LYwtd~~~~~~I~v~~~~~~~r---l~~~-l~~P~~iavdp~~ 356 (407)
++| .++|||++... ++|.+++.++... +... ...|.||++.|..
T Consensus 215 ~~d--~~~lyva~~~~-~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 215 TSY--GKNLYYTDWKT-NSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp EEE--TTEEEEEETTT-TEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred EEe--CCEEEEEECCC-CeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 998 79999999998 8999999976542 3322 3479999998864
No 19
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.92 E-value=2.2e-25 Score=236.56 Aligned_cols=197 Identities=20% Similarity=0.320 Sum_probs=155.1
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc--ccceeeeeecccceEEeecCCCCCeeeeE
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT--TMDEYLVFSTRTEIRALHLDPTLTAVPFK 257 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~--~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~ 257 (407)
..++|.. ++.|+|+|++.++ +|+|.|+.||.+.+++++|. .+.++|+|+++..|+.+.+.......
T Consensus 333 dideC~~--~~~C~~~C~n~~g-------~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~I~~id~~~~~~~~--- 400 (699)
T 1n7d_A 333 DIDECQD--PDTCSQLCVNLEG-------GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTS--- 400 (699)
T ss_dssp CCCCCSS--SSSCTTTCCBCSS-------CBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC-CEECTTSCCEEC---
T ss_pred CccccCC--CCccccccccCCC-------CeeeeeecccccCCCCCcccccccceeEEecCccceEEEeCCCCccee---
Confidence 5678863 5789999998876 59999999999999999998 46789999999999999887654322
Q ss_pred eecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCC----Ccccc----cCCCCccEEEEeccCCeEEEEeCCCCCeE
Q psy950 258 TVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN----PSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKI 329 (407)
Q Consensus 258 ~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~----~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I 329 (407)
.+..+.++.+|+||+.+++|||+|... .+|+++++++ ..... ++. .|.||||||.+++|||+|... ++|
T Consensus 401 ~~~~~~~p~gla~d~~~~~Ly~sD~~~-~~I~~~~~~g~~~~~~~~~~i~~~~~-~P~glavD~~~g~LY~tD~~~-~~I 477 (699)
T 1n7d_A 401 LIPNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVISRDIQ-APDGLAVDWIHSNIYWTDSVL-GTV 477 (699)
T ss_dssp CSCCCTTCCCCEEETTTTEEEECCTTT-TSBEEEESCCCCC-CCCCCBCCSCC---CCCEECCCSSSBCEECCTTT-SCE
T ss_pred eeccCcceEEEccccccCeEEEEecCC-CeEEEEecCCCCCCcceEEEEeCCCC-CcceEEEEeeCCcEEEEeccC-CeE
Confidence 244567889999999999999999998 8899999986 22222 445 899999999999999999998 899
Q ss_pred EEEECCCCcc--cc-cCCCceeEEEEcCCCCeEEEEeCCCCCcccccCCCCCCCcceeEEEeCCCccc
Q psy950 330 AWIPTTNPSS--AS-SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASVNTILSRGKDEK 394 (407)
Q Consensus 330 ~v~~~~~~~r--l~-~~l~~P~~iavdp~~g~lywtd~~~~~~ia~~dg~~~~~~~~~~l~~~~~~~~ 394 (407)
.+++++|..+ +. ..+..|++|||||..|+|||+||+..++| ...+++|+.++.|...++.+|
T Consensus 478 ~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I---~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 478 SVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKI---KKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp EEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCE---EBCCSSSCCCCEESCSSCSSC
T ss_pred EEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeE---EEEeCCCCCeeEEEeCCCCCc
Confidence 9999998764 33 47899999999999999999999876777 233445555554443333333
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.88 E-value=1.7e-20 Score=175.18 Aligned_cols=230 Identities=17% Similarity=0.248 Sum_probs=174.7
Q ss_pred CEEEEEEcCCCCeEEEEeCCCCCeE-----EEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-cCC
Q psy950 45 RLLYWIDYGQYPRIGKSYLDGSKWT-----SIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-RNL 118 (407)
Q Consensus 45 g~lywtd~~~~~~I~r~~~dG~~~~-----~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-~~~ 118 (407)
.+|||++. .+|.|.+++|...+ .++......|.|+++|+.+++|||+|...++|.+++++|.....+. ..+
T Consensus 2 ~~l~~~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT---GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE---EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC---CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 47899985 38999999998642 3444334579999999999999999999999999999998765544 556
Q ss_pred CCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccc
Q psy950 119 PNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLC 196 (407)
Q Consensus 119 ~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC 196 (407)
..|.+|+++. +.|||+|...++|.+++.++ . ....+.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g--~--~~~~~~------------------------------------- 117 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG--T--QRRVLF------------------------------------- 117 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTS--C--SCEEEE-------------------------------------
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCC--C--CEEEEE-------------------------------------
Confidence 8999999984 79999999888888877654 1 000000
Q ss_pred eecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCE
Q psy950 197 FSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDK 276 (407)
Q Consensus 197 ~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~ 276 (407)
. ..+..+.++++|+.+++
T Consensus 118 ----------------------------------------------------~----------~~~~~P~~i~vd~~~g~ 135 (267)
T 1npe_A 118 ----------------------------------------------------D----------TGLVNPRGIVTDPVRGN 135 (267)
T ss_dssp ----------------------------------------------------C----------SSCSSEEEEEEETTTTE
T ss_pred ----------------------------------------------------E----------CCCCCccEEEEeeCCCE
Confidence 0 00112457888998999
Q ss_pred EEEEEec--CCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--cccCCCcee
Q psy950 277 ILFTQIR--PWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--ASSNLTNVV 348 (407)
Q Consensus 277 lywsd~~--~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l~~~l~~P~ 348 (407)
|||++.. . ++|+++.+++..... .+. .|.|||+|..+++|||+|... ++|.++++++..+ +...+..|.
T Consensus 136 lyv~~~~~~~-~~I~~~~~dg~~~~~~~~~~~~-~P~gia~d~~~~~lyv~d~~~-~~I~~~~~~g~~~~~~~~~~~~P~ 212 (267)
T 1npe_A 136 LYWTDWNRDN-PKIETSHMDGTNRRILAQDNLG-LPNGLTFDAFSSQLCWVDAGT-HRAECLNPAQPGRRKVLEGLQYPF 212 (267)
T ss_dssp EEEEECCSSS-CEEEEEETTSCCCEEEECTTCS-CEEEEEEETTTTEEEEEETTT-TEEEEEETTEEEEEEEEECCCSEE
T ss_pred EEEEECCCCC-cEEEEEecCCCCcEEEEECCCC-CCcEEEEcCCCCEEEEEECCC-CEEEEEecCCCceEEEecCCCCce
Confidence 9999976 4 689999998865432 455 899999999999999999999 8999999998654 446778999
Q ss_pred EEEEcCCCCeEEEEeCCCCCcccccCCCCCC-CcceeEEEeC
Q psy950 349 GVEFDYADDKILFTQIRPWAKIAWIPTTNPS-SASVNTILSR 389 (407)
Q Consensus 349 ~iavdp~~g~lywtd~~~~~~ia~~dg~~~~-~~~~~~l~~~ 389 (407)
||++| .++|||+||+... |. ..+++ |..+++|...
T Consensus 213 gi~~d--~~~lyva~~~~~~-v~---~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 213 AVTSY--GKNLYYTDWKTNS-VI---AMDLAISKEMDTFHPH 248 (267)
T ss_dssp EEEEE--TTEEEEEETTTTE-EE---EEETTTTEEEEEECCS
T ss_pred EEEEe--CCEEEEEECCCCe-EE---EEeCCCCCceEEEccc
Confidence 99998 6999999996543 42 23454 4455555443
No 21
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.4e-16 Score=159.60 Aligned_cols=228 Identities=11% Similarity=0.109 Sum_probs=163.9
Q ss_pred CCCCcceEEEeC-CCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCC----eEEEEe
Q psy950 31 FRSANTTSPFSP-LPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD----LIQKIS 105 (407)
Q Consensus 31 ~~~~P~~iavdp-~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~----~I~~~~ 105 (407)
.+.+|.+||+|| ..+.||++|.. .+|.+.++++...+.+.. ....|.+|++|+.+++|||+|...+ .+..++
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ--HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT--EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC--CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 477999999999 58999999987 499999999987777665 6678999999999889999998543 466677
Q ss_pred cCCCeE--EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCC
Q psy950 106 YNGGNR--QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDEN 181 (407)
Q Consensus 106 ~dG~~~--~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~ 181 (407)
.+|... +.+ ..+.+|.+++++. +.||++|+..++|++++..+ + ....+ . ..+
T Consensus 212 ~~g~~~~~~~l-~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~-~---~~~~~------------~---~~~---- 267 (430)
T 3tc9_A 212 RESGFKVITEL-TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTT-Q---ETTPL------------F---TIQ---- 267 (430)
T ss_dssp GGGTSCSEEEE-EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTT-T---EEEEE------------E---ECS----
T ss_pred CCCceeeeeee-ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC-C---cEEEE------------E---EcC----
Confidence 777554 333 3588999999986 89999999999999988764 1 11000 0 000
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecC
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSN 261 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~ 261 (407)
.
T Consensus 268 -------------------------------------------------------------------------------~ 268 (430)
T 3tc9_A 268 -------------------------------------------------------------------------------D 268 (430)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc-----------------------ccccCCCCcc-EEEEec----
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS-----------------------SASSNLTNVV-GVEFDY---- 313 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~-----------------------~~~~~~~~~~-glAvDw---- 313 (407)
...+.+|++|+.+++|||+|... .+|.++..++.. ....+. .|. |+++|.
T Consensus 269 ~~~P~gia~~pdG~~lyv~d~~~-~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~-~P~~gv~v~~~~y~ 346 (430)
T 3tc9_A 269 SGWEFHIQFHPSGNYAYIVVVNQ-HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMH-APRQGTFVKNPAYK 346 (430)
T ss_dssp SSCCEEEEECTTSSEEEEEETTT-TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBS-SEEEEEEEECGGGT
T ss_pred CCcceeEEEcCCCCEEEEEECCC-CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeC-CCcceEEEcccccc
Confidence 00123455666666666666665 566665554320 000244 788 899974
Q ss_pred ---cCCeEEEEeCCCCCeEEEEECCCCcc-cc------------------cCCCceeEEEEcCCCCeEEEEeCCCC
Q psy950 314 ---ADDKILFTQIRPWAKIAWIPTTNPSS-AS------------------SNLTNVVGVEFDYADDKILFTQIRPW 367 (407)
Q Consensus 314 ---i~~~LYwtd~~~~~~I~v~~~~~~~r-l~------------------~~l~~P~~iavdp~~g~lywtd~~~~ 367 (407)
-.++||++|... ++|.+++.+|.-. +. ..+..|+||++||..|.||.+|+++.
T Consensus 347 ~~D~~g~lyvaD~~n-~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~ 421 (430)
T 3tc9_A 347 GSSDEYDFYFCDREN-HCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENR 421 (430)
T ss_dssp TSSCCEEEEEEEGGG-TEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred ccCCCCeEEEEECCC-cEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCC
Confidence 357999999999 8999998776422 11 12678999999999999999998543
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.74 E-value=1.9e-15 Score=144.30 Aligned_cols=262 Identities=11% Similarity=0.170 Sum_probs=174.0
Q ss_pred ceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCC-------------CCeEE
Q psy950 36 TTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAK-------------LDLIQ 102 (407)
Q Consensus 36 ~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~-------------~~~I~ 102 (407)
.-++.| .++||+++.....+|++++.||++.+.|... .+..|.+| ++.||+++.. ...|.
T Consensus 19 g~~~~~--g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~---~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy 91 (302)
T 3s25_A 19 GLFCES--DGEVFFSNTNDNGRLYAMNIDGSNIHKLSND---TAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLC 91 (302)
T ss_dssp TCEEEE--TTEEEEEEGGGTTEEEEEETTSCSCEEEEEE---EEEEEEEC--SSEEEEEEECC------CCSSCCSEEEE
T ss_pred eEEEEe--CCEEEEEeCCCCceEEEEcCCCCCCEEccCC---ceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEE
Confidence 344544 8999999876556999999999998887753 46777665 7999999754 35799
Q ss_pred EEecCCCeEEEEccCCCCceEEEEeCCEEEEEe---CCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCC
Q psy950 103 KISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVD---RNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPD 179 (407)
Q Consensus 103 ~~~~dG~~~~~~~~~~~~P~~lav~~~~lYwtd---~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~ 179 (407)
+++++|+.++.+...... .+++.+++|||++ .....|++++.++ . ..+.|.....
T Consensus 92 ~i~~dg~~~~~l~~~~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s---~~~~lt~~~~---------------- 149 (302)
T 3s25_A 92 RIKRNGHGSTVLDPDPCI--YASLIGNYIYYLHYDTQTATSLYRIRIDG-E---EKKKIKNHYL---------------- 149 (302)
T ss_dssp EEETTSCCCEEEECSCEE--EEEEETTEEEEEEESSSSCEEEEEEETTS-C---CCEEEESSCC----------------
T ss_pred EEeCCCCcceEeecCCcc--EEEEeCCEEEEEeecCCCCceEEEEECCC-C---CeEEEeCCCc----------------
Confidence 999999998776643322 5778999999999 4455899999986 2 2333321100
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeE
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFK 257 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~ 257 (407)
.++. ++++ .|.|+. ...|.++.++...... +
T Consensus 150 --~~~~------------------------------------~~g~-------~iy~t~~g~~~Iy~~~l~g~~~~~-l- 182 (302)
T 3s25_A 150 --FTCN------------------------------------TSDR-------YFYYNNPKNGQLYRYDTASQSEAL-F- 182 (302)
T ss_dssp --CCSE------------------------------------EETT-------EEEEECTTTCCEEEEETTTTEEEE-E-
T ss_pred --eEee------------------------------------EECC-------EEEEEeCCCceEEEEECCCCCEEE-E-
Confidence 0010 0110 133332 2456666665543211 1
Q ss_pred eecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccccCCCCccEEEEeccCCeEEEE-eCCCCCeEEEEECCC
Q psy950 258 TVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASSNLTNVVGVEFDYADDKILFT-QIRPWAKIAWIPTTN 336 (407)
Q Consensus 258 ~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~~~~~~~~glAvDwi~~~LYwt-d~~~~~~I~v~~~~~ 336 (407)
.... ....++|.++.|||++.....+|++++++|.....-..... ..+|+.++.|||+ +... ..|++++++|
T Consensus 183 -~~~~---~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~~~~~~g~~Iy~~~~~~~-~~i~~~~~DG 255 (302)
T 3s25_A 183 -YDCN---CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--EHYNVYGSLIFYQRGGDN-PALCVVKNDG 255 (302)
T ss_dssp -ECSC---EEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--EEEEEETTEEEEEECSSS-CEEEEEETTS
T ss_pred -eCCC---ccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--ceEEECCCEEEEEECCCC-cEEEEEECCC
Confidence 2221 12234578999999997642589999999987554122122 4578889999998 5555 7899999999
Q ss_pred Ccc--cccCCCceeEEEEcCCCCeEEEEeCCCCCcccccCCCCCCCcceeEEEe
Q psy950 337 PSS--ASSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASVNTILS 388 (407)
Q Consensus 337 ~~r--l~~~l~~P~~iavdp~~g~lywtd~~~~~~ia~~dg~~~~~~~~~~l~~ 388 (407)
..| +... .. .++.+..++|||+||.... | ...+++|+++++|+-
T Consensus 256 ~~r~~l~~~--~~--~~i~i~~d~Iy~td~~~~~-i---~~~~~dGs~~~~l~~ 301 (302)
T 3s25_A 256 TGFKELAKG--EF--CNINVTSQYVYFTDFVSNK-E---YCTSTQNPDTIKALQ 301 (302)
T ss_dssp CCCEEEEES--CE--EEEEECSSEEEEEETTTCC-E---EEEESSSCCSCEECC
T ss_pred CccEEeeCC--cc--ceEEEeCCEEEEEECCCCe-E---EEEECCCCCceEecC
Confidence 864 5443 23 3566689999999997665 5 233567777777664
No 23
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=1.7e-15 Score=150.65 Aligned_cols=229 Identities=10% Similarity=0.006 Sum_probs=167.8
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCC-eEEEEecCCC
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD-LIQKISYNGG 109 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~-~I~~~~~dG~ 109 (407)
.+..|.+||+|+. |.|||+|.... +|.+.++++.....+... ...|. +++++.++.|||++...+ .|..++.++.
T Consensus 129 ~~~~P~~la~d~~-g~lyv~d~~~~-~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 129 KFKYMWGIAAVGN-NTVLAYQRDDP-RVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCCCEEEEEECST-TEEEEEETTTT-EEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred ccCCceEEEEeCC-CCEEEEecCCC-cEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 3778999999976 78999998764 999999998777777664 45688 999999999999998665 9999998865
Q ss_pred eE-EEE----ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCC
Q psy950 110 NR-QII----RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENN 182 (407)
Q Consensus 110 ~~-~~~----~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n 182 (407)
.. ..+ ......|.+++++. +.||+++. .+.|++++..+ + ...++. ...
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~-~---~~~~~~-------------~~~------- 259 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKT-Q---EVTLIK-------------QLE------- 259 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTT-C---CEEEEE-------------ECC-------
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCC-C---CEEEEe-------------ccc-------
Confidence 54 333 23678999999986 89999876 56888888765 1 111110 000
Q ss_pred CccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCC
Q psy950 183 PCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNL 262 (407)
Q Consensus 183 ~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~ 262 (407)
.. | .. .
T Consensus 260 --~~------------------------------g-----~~-------------------------------------~ 265 (409)
T 3hrp_A 260 --LS------------------------------G-----SL-------------------------------------G 265 (409)
T ss_dssp --CC------------------------------S-----CC-------------------------------------C
T ss_pred --cc------------------------------C-----CC-------------------------------------C
Confidence 00 0 00 0
Q ss_pred cceE-EEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc-----------------cCCCCccEEEEeccCCeEEEEeC-
Q psy950 263 TNVV-GVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS-----------------SNLTNVVGVEFDYADDKILFTQI- 323 (407)
Q Consensus 263 ~~~~-ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~-----------------~~~~~~~glAvDwi~~~LYwtd~- 323 (407)
.+|. ++++|+.+++||++|... ++|++++.++..... .+. .|.|||+|..++ ||++|.
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~-~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~-~P~gia~d~dG~-lyvad~~ 342 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNL-SSVYKITPDGECEWFCGSATQKTVQDGLREEALFA-QPNGMTVDEDGN-FYIVDGF 342 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTT-TEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCS-SEEEEEECTTCC-EEEEETT
T ss_pred CCccccEEEeCCCCEEEEEeCCC-CEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeC-CCeEEEEeCCCC-EEEEeCC
Confidence 0112 677888889999999888 889998887752221 134 799999998755 999999
Q ss_pred CCCCeEEEEEC-CCCcc-ccc---------------CCCceeEEEEcCCCCeEEEEeCCCC
Q psy950 324 RPWAKIAWIPT-TNPSS-ASS---------------NLTNVVGVEFDYADDKILFTQIRPW 367 (407)
Q Consensus 324 ~~~~~I~v~~~-~~~~r-l~~---------------~l~~P~~iavdp~~g~lywtd~~~~ 367 (407)
.. ++|.++++ +|.-. +.. .+..|.+|++||. |.||++|+++.
T Consensus 343 ~~-~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~ 401 (409)
T 3hrp_A 343 KG-YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGK 401 (409)
T ss_dssp TT-CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTC
T ss_pred CC-CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCC
Confidence 88 89999994 44322 211 2689999999998 99999998653
No 24
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.72 E-value=9.8e-16 Score=153.60 Aligned_cols=229 Identities=10% Similarity=0.056 Sum_probs=161.6
Q ss_pred CCCCcceEEEeCC--CCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCC----CeEEEE
Q psy950 31 FRSANTTSPFSPL--PRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKL----DLIQKI 104 (407)
Q Consensus 31 ~~~~P~~iavdp~--~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~----~~I~~~ 104 (407)
.+..|.+|++||. .|.|||+|.. .+|.|.++++...+.+.. .+..|.+|++|+.++ ||++|... ..+..+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~--~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR--DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT--SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC--CCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEE
Confidence 5778999999994 8999999987 499999996555555544 567899999999877 99999743 235555
Q ss_pred ecCCCeE-EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCC
Q psy950 105 SYNGGNR-QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDEN 181 (407)
Q Consensus 105 ~~dG~~~-~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~ 181 (407)
..++... ......+.+|.+++++. +.|||+|+..++|++++..+ +. ..+. ++. . .
T Consensus 213 ~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~--~~~~------------~~~--~----~- 270 (433)
T 4hw6_A 213 TRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GT--LTEE------------EVM--M----D- 270 (433)
T ss_dssp CGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CC--EEEE------------EEE--C----S-
T ss_pred ECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-Ce--EEEE------------Eec--c----C-
Confidence 5544332 12223688999999986 89999999999999888764 21 0000 000 0 0
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecC
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSN 261 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~ 261 (407)
.
T Consensus 271 -------------------------------------------------------------------~------------ 271 (433)
T 4hw6_A 271 -------------------------------------------------------------------T------------ 271 (433)
T ss_dssp -------------------------------------------------------------------C------------
T ss_pred -------------------------------------------------------------------C------------
Confidence 0
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcc-------c----------------ccCCCCccEEEE-------
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS-------A----------------SSNLTNVVGVEF------- 311 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~-------~----------------~~~~~~~~glAv------- 311 (407)
.....+|++|+.+++||++|... .+|.++..++... . ..+. .|.|||+
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~-~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~-~P~giav~~n~~y~ 349 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGK-HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLW-GPNQGIFVKNEAYA 349 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTT-TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCS-SEEEEEEEECGGGT
T ss_pred CCCcccEEEeCCCCEEEEEeCCC-CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEc-CCccEEEEcccccc
Confidence 00012466777778888888877 7788877653210 0 0234 7999999
Q ss_pred -eccCCeEEEEeCCCCCeEEEEECCCCcc-cc------------------cCCCceeEEEEcCCCCeEEEEeCCCC
Q psy950 312 -DYADDKILFTQIRPWAKIAWIPTTNPSS-AS------------------SNLTNVVGVEFDYADDKILFTQIRPW 367 (407)
Q Consensus 312 -Dwi~~~LYwtd~~~~~~I~v~~~~~~~r-l~------------------~~l~~P~~iavdp~~g~lywtd~~~~ 367 (407)
|--.++||++|... ++|.+++.+|.-. +. ..+..|.||++||..|.||++|+++.
T Consensus 350 ~dd~~g~lyvaD~~n-~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~ 424 (433)
T 4hw6_A 350 GEEDEYDFYFCDRDS-HTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNH 424 (433)
T ss_dssp TSSCCEEEEEEETTT-TEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT
T ss_pred ccCCCCcEEEEECCC-CEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCC
Confidence 34578999999999 8999998776422 11 13678999999999999999998643
No 25
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=8.6e-13 Score=123.09 Aligned_cols=264 Identities=18% Similarity=0.154 Sum_probs=174.8
Q ss_pred EcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC
Q psy950 28 KTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN 107 (407)
Q Consensus 28 ~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d 107 (407)
+......|.+|++|+. |.||+++.... .|.+.+.+|.-....+......|.+|++|+ .++||+++...+.|.+++.+
T Consensus 15 ~~~~~~~p~~i~~d~~-g~l~v~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 15 LSIPDSGPYGITSSED-GKVWFTQHKAN-KISSLDQSGRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp CSSTTCCEEEEEECTT-SCEEEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred cCCCCCCcceeeECCC-CCEEEEcCCCC-eEEEECCCCceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC
Confidence 3445778999999987 88999997654 899999884433322223356899999996 56899999988999999999
Q ss_pred CCeEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEE-cccCCCCceeeEEeeecCCCCCCCCCc
Q psy950 108 GGNRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTP-IRTGLSGLRDIAIFDIVNQPPDENNPC 184 (407)
Q Consensus 108 G~~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~-i~~~~~~p~~i~i~~~~~qp~~~~n~C 184 (407)
|....... .....|.+|+++. +.+|+++...+.|.+.+..+ . .... +......|.+|.+
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~--~~~~~~~~~~~~~~~i~~-------------- 153 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG--T--IYEYDLPNKGSYPAFITL-------------- 153 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS--C--EEEEECSSTTCCEEEEEE--------------
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC--C--EEEccCCCCCCCceeEEE--------------
Confidence 66543333 3457899999985 89999998888898887653 1 1111 1101111222111
Q ss_pred cCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEeecCC
Q psy950 185 FRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTVSNL 262 (407)
Q Consensus 185 ~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~~~~ 262 (407)
.++++ |+++. ...|..+.... ... .+..-...
T Consensus 154 ------------------------------------d~~g~--------l~v~~~~~~~i~~~~~~g-~~~-~~~~~~~~ 187 (300)
T 2qc5_A 154 ------------------------------------GSDNA--------LWFTENQNNSIGRITNTG-KLE-EYPLPTNA 187 (300)
T ss_dssp ------------------------------------CTTSS--------EEEEETTTTEEEEECTTC-CEE-EEECSSTT
T ss_pred ------------------------------------CCCCC--------EEEEecCCCeEEEECCCC-cEE-EeeCCCCC
Confidence 11111 22222 22344443311 111 11111224
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS 338 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~ 338 (407)
..+.++.+|. ++.||+++... +.|.+++.++..... ... .|.+|++|.- ++||+++... +.|.+++.++..
T Consensus 188 ~~~~~i~~d~-~g~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~-~~~~i~~d~~-g~l~v~~~~~-~~i~~~~~~g~~ 262 (300)
T 2qc5_A 188 AAPVGITSGN-DGALWFVEIMG-NKIGRITTTGEISEYDIPTPNA-RPHAITAGKN-SEIWFTEWGA-NQIGRITNDNTI 262 (300)
T ss_dssp CCEEEEEECT-TSSEEEEETTT-TEEEEECTTCCEEEEECSSTTC-CEEEEEECST-TCEEEEETTT-TEEEEECTTSCE
T ss_pred CCcceEEECC-CCCEEEEccCC-CEEEEEcCCCcEEEEECCCCCC-CceEEEECCC-CCEEEeccCC-CeEEEECCCCcE
Confidence 5678899997 45899999877 789998886543221 334 8999999987 5699999887 789999986653
Q ss_pred c---cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 339 S---ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 339 r---l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
. +......|.+|++|+. |.||++++
T Consensus 263 ~~~~~~~~~~~~~~i~~~~~-g~l~v~~~ 290 (300)
T 2qc5_A 263 QEYQLQTENAEPHGITFGKD-GSVWFALK 290 (300)
T ss_dssp EEEECCSTTCCCCCEEECTT-SCEEEECS
T ss_pred EEEECCccCCccceeEeCCC-CCEEEEcc
Confidence 3 2235678999999986 88999986
No 26
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=2e-13 Score=137.85 Aligned_cols=243 Identities=13% Similarity=0.074 Sum_probs=172.0
Q ss_pred CCCCCcceEEEeCC-CCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCC---CCCceeEEE-------eCCCCeEEEEeCCC
Q psy950 30 SFRSANTTSPFSPL-PRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNG---ISMPRDLTI-------DMQTHDVYWVDAKL 98 (407)
Q Consensus 30 ~~~~~P~~iavdp~-~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~---~~~P~glai-------D~~~~~lYw~d~~~ 98 (407)
..+..|.+|++||. .+.||.++...+ +|.+.++.+...+++...+ +..|.+|++ |..+++||++|...
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~-~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHK-AIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEE-EEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCC-eEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 34678999999994 899999998754 8999999998888888643 446999999 99888999999876
Q ss_pred C------eEEEEecCC--CeE-----EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecC-------CCCCCcccE
Q psy950 99 D------LIQKISYNG--GNR-----QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKL-------ASTNITLPT 156 (407)
Q Consensus 99 ~------~I~~~~~dG--~~~-----~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~-------~~g~~~~~~ 156 (407)
+ .|..++.+. .-. +.+ ....+|.++++++ +.||++++..+.|++.+.. + +. .
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v-~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t-g~---~- 288 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLI-AAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN-GG---S- 288 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEE-EEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT-TC---C-
T ss_pred CCcccCceEEEEecCCCCceeecccceee-ccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC-ce---e-
Confidence 2 377774333 321 233 3578999999987 8999999999999998876 2 10 0
Q ss_pred EcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeee
Q psy950 157 PIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVF 236 (407)
Q Consensus 157 ~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~ 236 (407)
..|. .... -+ ++. .
T Consensus 289 ------------------~tp~----~~~~--~g--------------------------~~~--------------~-- 302 (496)
T 3kya_A 289 ------------------WDPI----VKNN--PN--------------------------TFK--------------Q-- 302 (496)
T ss_dssp ------------------CCCB----GGGC--TT--------------------------TEE--------------E--
T ss_pred ------------------eccc----cccc--cc--------------------------ccc--------------e--
Confidence 0000 0000 00 000 0
Q ss_pred ecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcc-------cc---------
Q psy950 237 STRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS-------AS--------- 300 (407)
Q Consensus 237 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~-------~~--------- 300 (407)
+ + .+.....+.+|++++.++.||++|... .+|+++..++... ..
T Consensus 303 -----l--~------------~~~~~~~p~~ia~~p~G~~lYvaD~~~-h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 303 -----L--F------------TIADPSWEFQIFIHPTGKYAYFGVINN-HYFMRSDYDEIKKEFITPYNFVGGYKQSGYR 362 (496)
T ss_dssp -----E--E------------ECSSSSCCEEEEECTTSSEEEEEETTT-TEEEEEEEETTTTEECCCEEEEEBTTBCCCB
T ss_pred -----e--E------------ecCCCCCceEEEEcCCCCEEEEEeCCC-CEEEEEecCCCcceecccEEecCCCCCCccc
Confidence 0 0 001112346788899999999999888 8898877665321 00
Q ss_pred -------cCCCCcc-EEEEec------cCCeEEEEeCCCCCeEEEEECCCCcc-cc------------------------
Q psy950 301 -------SNLTNVV-GVEFDY------ADDKILFTQIRPWAKIAWIPTTNPSS-AS------------------------ 341 (407)
Q Consensus 301 -------~~~~~~~-glAvDw------i~~~LYwtd~~~~~~I~v~~~~~~~r-l~------------------------ 341 (407)
.+. .|. |+++|- ..++||++|... ++|.+++.+|.-. +.
T Consensus 363 DG~~~~a~f~-~P~~gv~vd~~~~~~~~~g~lyVaD~~N-~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~ 440 (496)
T 3kya_A 363 DDVGTEARMN-NPCQGVFVKNPDYTGEEEYDFYFVDRLN-FCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREV 440 (496)
T ss_dssp CCBGGGCBCS-SEEEEEEEECTTCCSSCCEEEEEEEGGG-TEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTT
T ss_pred CCcccccccC-CCeEEEEEccccccccCCCeEEEEECCC-CEEEEEeCCCCEEEEecccccccccCccccccCCCCchhh
Confidence 233 688 888873 578999999999 8999998776421 11
Q ss_pred cCCCceeEEEEcCCCCeEEEEeCCCC
Q psy950 342 SNLTNVVGVEFDYADDKILFTQIRPW 367 (407)
Q Consensus 342 ~~l~~P~~iavdp~~g~lywtd~~~~ 367 (407)
..+..|.||++|+.+|.||.+|.++.
T Consensus 441 a~f~~P~gIavd~~~g~lyVaD~~N~ 466 (496)
T 3kya_A 441 ARFRDVSGLVYDDVKEMFYVHDQVGH 466 (496)
T ss_dssp CCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred hhcCCCcEEEEECCCCEEEEEeCCCC
Confidence 13688999999999999999998654
No 27
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=3e-13 Score=124.89 Aligned_cols=237 Identities=16% Similarity=0.178 Sum_probs=156.0
Q ss_pred EcCCCC---CcceEEEeCCCCEEEE-EEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEE
Q psy950 28 KTSFRS---ANTTSPFSPLPRLLYW-IDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103 (407)
Q Consensus 28 ~~~~~~---~P~~iavdp~~g~lyw-td~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~ 103 (407)
...++. .|.+|++|+. |.||+ ++.... +|.+.+.++.....+.......|.+|++|+. ++||+++. .+.|.+
T Consensus 16 ~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~ 91 (270)
T 1rwi_B 16 PFTGIDFRLSPSGVAVDSA-GNVYVTSEGMYG-RVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNRVVT 91 (270)
T ss_dssp CCCSCSSCCCEEEEEECTT-CCEEEEECSSSC-EEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET-TTEEEE
T ss_pred ccccccccCCccceEECCC-CCEEEEccCCCC-cEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC-CCEEEE
Confidence 344555 9999999987 67999 876654 8999887766544433344568999999995 56999998 889999
Q ss_pred EecCCCeEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEc-ccCCCCceeeEEeeecCCCCCC
Q psy950 104 ISYNGGNRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPI-RTGLSGLRDIAIFDIVNQPPDE 180 (407)
Q Consensus 104 ~~~dG~~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i-~~~~~~p~~i~i~~~~~qp~~~ 180 (407)
++.+|.....+. .....|.+|+++. +.||+++...+.|.+.+... . ..... ...+..|.+|.
T Consensus 92 ~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~---~-~~~~~~~~~~~~p~~i~----------- 156 (270)
T 1rwi_B 92 LAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS---K-TQTVLPFTGLNDPDGVA----------- 156 (270)
T ss_dssp ECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC---C-SCEECCCCSCCSCCCEE-----------
T ss_pred EeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC---c-eeEeeccccCCCceeEE-----------
Confidence 999987765543 4557899999985 78999999888888885332 1 11111 00011111111
Q ss_pred CCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEe
Q psy950 181 NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKT 258 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~ 258 (407)
+.++++ ++++. ...|..+....... ....
T Consensus 157 ---------------------------------------~~~~g~--------l~v~~~~~~~i~~~~~~~~~~--~~~~ 187 (270)
T 1rwi_B 157 ---------------------------------------VDNSGN--------VYVTDTDNNRVVKLEAESNNQ--VVLP 187 (270)
T ss_dssp ---------------------------------------ECTTCC--------EEEEEGGGTEEEEECTTTCCE--EECC
T ss_pred ---------------------------------------EeCCCC--------EEEEECCCCEEEEEecCCCce--Eeec
Confidence 112221 22322 23455554433211 1111
Q ss_pred ecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEEC
Q psy950 259 VSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPT 334 (407)
Q Consensus 259 ~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~ 334 (407)
...+..+.+|.+|..+ +||+++... +.|.+++.++..... ++. .|.+|++|.-+ +||+++... ++|.++++
T Consensus 188 ~~~~~~p~~i~~d~~g-~l~v~~~~~-~~v~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g-~l~v~~~~~-~~v~~~~~ 262 (270)
T 1rwi_B 188 FTDITAPWGIAVDEAG-TVYVTEHNT-NQVVKLLAGSTTSTVLPFTGLN-TPLAVAVDSDR-TVYVADRGN-DRVVKLTS 262 (270)
T ss_dssp CSSCCSEEEEEECTTC-CEEEEETTT-SCEEEECTTCSCCEECCCCSCS-CEEEEEECTTC-CEEEEEGGG-TEEEEECC
T ss_pred ccCCCCceEEEECCCC-CEEEEECCC-CcEEEEcCCCCcceeeccCCCC-CceeEEECCCC-CEEEEECCC-CEEEEEcC
Confidence 2234668899999765 899999887 789999988754332 344 89999999865 699999999 89999887
Q ss_pred CCC
Q psy950 335 TNP 337 (407)
Q Consensus 335 ~~~ 337 (407)
...
T Consensus 263 ~~~ 265 (270)
T 1rwi_B 263 LEH 265 (270)
T ss_dssp CGG
T ss_pred CCc
Confidence 654
No 28
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.60 E-value=1.2e-14 Score=138.81 Aligned_cols=122 Identities=11% Similarity=0.111 Sum_probs=99.8
Q ss_pred eeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEE-
Q psy950 16 LALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWV- 94 (407)
Q Consensus 16 ~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~- 94 (407)
+..++|+.++++.. .+..++++|..++|||++++..++|+|++|||+++++|++..+ | .+|+.+++|||+
T Consensus 171 ~~~l~g~~~~~l~~----~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 171 RYDTASQSEALFYD----CNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQR 241 (302)
T ss_dssp EEETTTTEEEEEEC----SCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEE
T ss_pred EEECCCCCEEEEeC----CCccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEE
Confidence 34456777666643 3455678899999999999866799999999999999876544 3 377789999997
Q ss_pred eCCCCeEEEEecCCCeEEEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 95 DAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 95 d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
+...+.|+++++||+.++.+... +..+|++++++|||+||..+.|++++.++
T Consensus 242 ~~~~~~i~~~~~DG~~r~~l~~~--~~~~i~i~~d~Iy~td~~~~~i~~~~~dG 293 (302)
T 3s25_A 242 GGDNPALCVVKNDGTGFKELAKG--EFCNINVTSQYVYFTDFVSNKEYCTSTQN 293 (302)
T ss_dssp CSSSCEEEEEETTSCCCEEEEES--CEEEEEECSSEEEEEETTTCCEEEEESSS
T ss_pred CCCCcEEEEEECCCCccEEeeCC--ccceEEEeCCEEEEEECCCCeEEEEECCC
Confidence 66679999999999998877643 35689999999999999999999998776
No 29
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=1.7e-12 Score=124.62 Aligned_cols=239 Identities=13% Similarity=0.095 Sum_probs=163.4
Q ss_pred CCCCCcceEEEeCCCCEEEEEEcCCC-----------------------CeEEEEeCC-CCCeEEEEeCCCCCceeEEEe
Q psy950 30 SFRSANTTSPFSPLPRLLYWIDYGQY-----------------------PRIGKSYLD-GSKWTSIVSNGISMPRDLTID 85 (407)
Q Consensus 30 ~~~~~P~~iavdp~~g~lywtd~~~~-----------------------~~I~r~~~d-G~~~~~l~~~~~~~P~glaiD 85 (407)
..+..|.+||+||. |.||+++.+.. .+|.+.+.+ |.-........+..|.+|++|
T Consensus 21 ~~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 21 LLPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CCCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred eecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 35778999999997 79999998652 268888886 554333222346689999999
Q ss_pred CCCCeEEEEeCCCCeEEEEecCCC--eEEEEc---------cCCCCceEEEEeC--CEEEEEeC-CCCeEEEEecCCCCC
Q psy950 86 MQTHDVYWVDAKLDLIQKISYNGG--NRQIIR---------RNLPNPMGIAVHK--SDVYWVDR-NLRTVYKASKLASTN 151 (407)
Q Consensus 86 ~~~~~lYw~d~~~~~I~~~~~dG~--~~~~~~---------~~~~~P~~lav~~--~~lYwtd~-~~~~I~~~~~~~~g~ 151 (407)
+. ++||++|...++|.+.+.+|. ....+. ..+..|.+|+++. +.||++|. ..++|.+.+..+ .
T Consensus 100 ~~-g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g--~ 176 (329)
T 3fvz_A 100 TD-GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG--K 176 (329)
T ss_dssp TT-SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS--C
T ss_pred CC-CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC--C
Confidence 84 559999999999999999998 344442 3466899999984 89999996 688888888553 1
Q ss_pred CcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccc
Q psy950 152 ITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMD 231 (407)
Q Consensus 152 ~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~ 231 (407)
....+. . . +. + +.
T Consensus 177 --~~~~~~------------~-~--------------------------g~--------------~-----~~------- 189 (329)
T 3fvz_A 177 --FVTQWG------------E-E--------------------------SS--------------G-----SS------- 189 (329)
T ss_dssp --EEEEEC------------E-E--------------------------CC--------------S-----SS-------
T ss_pred --EEEEec------------c-C--------------------------CC--------------C-----CC-------
Confidence 111100 0 0 00 0 00
Q ss_pred eeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCC-CCcccc----cCCCCc
Q psy950 232 EYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT-NPSSAS----SNLTNV 306 (407)
Q Consensus 232 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~-~~~~~~----~~~~~~ 306 (407)
... ..+..+.+|++|+.++.||++|... ++|.+++.+ |..... ..+..+
T Consensus 190 -----------------~~~--------~~~~~p~gia~d~~~g~l~v~d~~~-~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 190 -----------------PRP--------GQFSVPHSLALVPHLDQLCVADREN-GRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp -----------------CCT--------TEESCEEEEEEETTTTEEEEEETTT-TEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred -----------------CCC--------cccCCCcEEEEECCCCEEEEEECCC-CEEEEEECCCCcEEEEEeccccCCCc
Confidence 000 0112357889998889999999998 899999988 432221 223356
Q ss_pred cEEEEec-----cCCeEEEEeCCCCCeEEEEECCCCcc---c---ccCCCceeEEEEcCCCCeEEEEeCCCC
Q psy950 307 VGVEFDY-----ADDKILFTQIRPWAKIAWIPTTNPSS---A---SSNLTNVVGVEFDYADDKILFTQIRPW 367 (407)
Q Consensus 307 ~glAvDw-----i~~~LYwtd~~~~~~I~v~~~~~~~r---l---~~~l~~P~~iavdp~~g~lywtd~~~~ 367 (407)
.++++.+ ..+++|+++... .+|.++++..... + ...+..|.+|++||. |.||.+|.++.
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~-~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d-G~lyvad~~~~ 313 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEP-VQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED-GTVYIGDAHTN 313 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCC-CCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT-SEEEEEESSSC
T ss_pred ceeeecCCEEEEeCCCEEeccCCC-cEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC-CCEEEEECCCC
Confidence 6666665 123355555555 6899998765542 2 246788999999995 59999998654
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=2.3e-11 Score=113.22 Aligned_cols=264 Identities=18% Similarity=0.156 Sum_probs=172.0
Q ss_pred eEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEE-eCCCCCceeEEEeCCCCeEEEEeCCCCeEEE
Q psy950 25 KKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIV-SNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103 (407)
Q Consensus 25 ~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~-~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~ 103 (407)
..-+......|.+|++|+. |.||+++.... .|.+.+.+|. ...+. ......|.+|++|+ .++||+++...+.|.+
T Consensus 7 ~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~-~v~~~d~~~~-~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 7 ELNLTNQDTGPYGITVSDK-GKVWITQHKAN-MISCINLDGK-ITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGR 82 (299)
T ss_dssp EEECCSSSCCEEEEEECTT-SCEEEEETTTT-EEEEECTTCC-EEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEE
T ss_pred EEcCCCcCCCccceEECCC-CCEEEEecCCC-cEEEEcCCCC-eEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEE
Confidence 3344445678999999987 78999987543 8999999844 33332 22356899999998 5789999988899999
Q ss_pred EecCCCeEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcc--cCCCCceeeEEeeecCCCCC
Q psy950 104 ISYNGGNRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIR--TGLSGLRDIAIFDIVNQPPD 179 (407)
Q Consensus 104 ~~~dG~~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~--~~~~~p~~i~i~~~~~qp~~ 179 (407)
.+.+|....... .....|.+|++++ +.||+++...+.|.+.+..+ . ...+. .....|.+|
T Consensus 83 ~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g--~---~~~~~~~~~~~~~~~i----------- 146 (299)
T 2z2n_A 83 ITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDG--K---IREYELPNKGSYPSFI----------- 146 (299)
T ss_dssp ECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTC--C---EEEEECSSTTCCEEEE-----------
T ss_pred ECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCC--C---EEEecCCCCCCCCceE-----------
Confidence 999876543332 3567899999986 89999998888899888732 1 11110 000111111
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeE
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFK 257 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~ 257 (407)
++ .+++. ++++. ...|..+.. ..... .+.
T Consensus 147 ----------------~~-----------------------~~~g~--------l~v~~~~~~~i~~~~~-~g~~~-~~~ 177 (299)
T 2z2n_A 147 ----------------TL-----------------------GSDNA--------LWFTENQNNAIGRITE-SGDIT-EFK 177 (299)
T ss_dssp ----------------EE-----------------------CTTSC--------EEEEETTTTEEEEECT-TCCEE-EEE
T ss_pred ----------------EE-----------------------cCCCC--------EEEEeCCCCEEEEEcC-CCcEE-Eee
Confidence 11 11111 22222 134444443 11111 110
Q ss_pred eecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEE
Q psy950 258 TVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIP 333 (407)
Q Consensus 258 ~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~ 333 (407)
.......+.++.+|.. +.||+++... +.|.+++.++..... ... .|.+|++|.- ++||+++... +.|.+++
T Consensus 178 ~~~~~~~~~~i~~~~~-g~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~-~~~~i~~~~~-g~l~v~~~~~-~~i~~~d 252 (299)
T 2z2n_A 178 IPTPASGPVGITKGND-DALWFVEIIG-NKIGRITTSGEITEFKIPTPNA-RPHAITAGAG-IDLWFTEWGA-NKIGRLT 252 (299)
T ss_dssp CSSTTCCEEEEEECTT-SSEEEEETTT-TEEEEECTTCCEEEEECSSTTC-CEEEEEECST-TCEEEEETTT-TEEEEEE
T ss_pred CCCCCCcceeEEECCC-CCEEEEccCC-ceEEEECCCCcEEEEECCCCCC-CceeEEECCC-CCEEEeccCC-ceEEEEC
Confidence 1123455778999876 5589998777 789998885432211 234 8999999976 5699999877 7899999
Q ss_pred CCCCcc-c--ccCCCceeEEEEcCCCCeEEEEeC
Q psy950 334 TTNPSS-A--SSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 334 ~~~~~r-l--~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
.++..+ + ......|.+|++ ..|.||+++.
T Consensus 253 ~~g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~ 284 (299)
T 2z2n_A 253 SNNIIEEYPIQIKSAEPHGICF--DGETIWFAME 284 (299)
T ss_dssp TTTEEEEEECSSSSCCEEEEEE--CSSCEEEEET
T ss_pred CCCceEEEeCCCCCCccceEEe--cCCCEEEEec
Confidence 865432 2 235678999999 6789999874
No 31
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=2.2e-12 Score=129.01 Aligned_cols=118 Identities=9% Similarity=-0.044 Sum_probs=95.7
Q ss_pred cCCCCCcceEEEeCCCCEEEEEEcCC---CCeEEEEeCCCCCe--EEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEE
Q psy950 29 TSFRSANTTSPFSPLPRLLYWIDYGQ---YPRIGKSYLDGSKW--TSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQK 103 (407)
Q Consensus 29 ~~~~~~P~~iavdp~~g~lywtd~~~---~~~I~r~~~dG~~~--~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~ 103 (407)
......|.+|++|+..++|||+|... ...+.+...+|.-. ..+. .+..|.++++|+.+++|||+|...++|.+
T Consensus 175 ~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~ 252 (430)
T 3tc9_A 175 YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFR 252 (430)
T ss_dssp ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEE
Confidence 34677899999999988899999843 23577778787654 3443 36789999999989999999999999999
Q ss_pred EecCCCeEEEEc--cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 104 ISYNGGNRQIIR--RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 104 ~~~dG~~~~~~~--~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
++.++.....+. .....|.+|+++. ++|||+|...+.|.+++.++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 253 YDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 999988763332 3456899999986 46999999999999988775
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=6.6e-12 Score=117.18 Aligned_cols=224 Identities=13% Similarity=0.106 Sum_probs=159.4
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeC-----CCCCceeEEEeCCCCeEEEEeCC-CCeEEEE
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN-----GISMPRDLTIDMQTHDVYWVDAK-LDLIQKI 104 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~-----~~~~P~glaiD~~~~~lYw~d~~-~~~I~~~ 104 (407)
.+..|.+|++|+. |.||+++.... +|.+.+.+|.....+... .+..|.+|+++...++||+++.. .+.|...
T Consensus 28 ~~~~p~~v~~~~~-g~l~v~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQ-NDIIVADTNNH-RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTT-CCEEEEEGGGT-EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCC-CCEEEEECCCC-EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 4678999999987 67999998754 899999997755444321 23579999998778999999975 7899999
Q ss_pred ecCCCeEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCC
Q psy950 105 SYNGGNRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENN 182 (407)
Q Consensus 105 ~~dG~~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n 182 (407)
+.+|.....+. .....|.+|+++. +.+|+++...+.|.+.+..+ . .... +. .+
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~--~~~~-------------~~---~~----- 160 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG--N--VLHK-------------FG---CS----- 160 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS--C--EEEE-------------EE---CT-----
T ss_pred CCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC--C--EEEE-------------eC---CC-----
Confidence 98888766554 4567899999986 78999988777777766432 1 0000 00 00
Q ss_pred CccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCC
Q psy950 183 PCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNL 262 (407)
Q Consensus 183 ~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~ 262 (407)
...
T Consensus 161 -----------------------------------------------------------------------------~~~ 163 (286)
T 1q7f_A 161 -----------------------------------------------------------------------------KHL 163 (286)
T ss_dssp -----------------------------------------------------------------------------TTC
T ss_pred -----------------------------------------------------------------------------Ccc
Confidence 001
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----c-CCCCccEEEEeccCCeEEEEeCCCCC-eEEEEECCC
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----S-NLTNVVGVEFDYADDKILFTQIRPWA-KIAWIPTTN 336 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~-~~~~~~glAvDwi~~~LYwtd~~~~~-~I~v~~~~~ 336 (407)
..+.+|++|+. +.+|+++... +.|.+++.++..... + +. .|.+|++|.- ++||.++... + +|.+++.++
T Consensus 164 ~~p~~i~~~~~-g~l~v~~~~~-~~i~~~~~~g~~~~~~~~~g~~~-~p~~i~~d~~-G~l~v~~~~~-~~~i~~~~~~g 238 (286)
T 1q7f_A 164 EFPNGVVVNDK-QEIFISDNRA-HCVKVFNYEGQYLRQIGGEGITN-YPIGVGINSN-GEILIADNHN-NFNLTIFTQDG 238 (286)
T ss_dssp SSEEEEEECSS-SEEEEEEGGG-TEEEEEETTCCEEEEESCTTTSC-SEEEEEECTT-CCEEEEECSS-SCEEEEECTTS
T ss_pred CCcEEEEECCC-CCEEEEECCC-CEEEEEcCCCCEEEEEccCCccC-CCcEEEECCC-CCEEEEeCCC-CEEEEEECCCC
Confidence 12345666654 4578877766 678887776643222 1 34 8999999985 5899999887 6 899999877
Q ss_pred Ccc--ccc--CCCceeEEEEcCCCCeEEEEeC
Q psy950 337 PSS--ASS--NLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 337 ~~r--l~~--~l~~P~~iavdp~~g~lywtd~ 364 (407)
... +.. ....|.+|+++| .|.||.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~-~g~l~vs~~ 269 (286)
T 1q7f_A 239 QLISALESKVKHAQCFDVALMD-DGSVVLASK 269 (286)
T ss_dssp CEEEEEEESSCCSCEEEEEEET-TTEEEEEET
T ss_pred CEEEEEcccCCCCcceeEEECC-CCcEEEECC
Confidence 642 322 345799999999 579999975
No 33
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=6.3e-12 Score=124.91 Aligned_cols=206 Identities=11% Similarity=0.023 Sum_probs=146.4
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEE----eCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIV----SNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN 107 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~----~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d 107 (407)
...|. ++++|..+.|||++.....+|.+.+.++......+ ......|.++++|+.+++||++|. .++|.+++++
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECC
Confidence 56688 99999999999999865448999999876653333 224568999999999999999886 7799999999
Q ss_pred CCeEEEE----c--cCCCCce-EEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCC
Q psy950 108 GGNRQII----R--RNLPNPM-GIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPP 178 (407)
Q Consensus 108 G~~~~~~----~--~~~~~P~-~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~ 178 (407)
+....++ . .....|+ +|+++. +.||++|...++|.+.+.++ . ...+. . ..
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~---~~~~~------------g-~~--- 307 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E---CEWFC------------G-SA--- 307 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C---EEEEE------------E-CT---
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C---EEEEE------------e-CC---
Confidence 8776655 2 2234578 999986 89999999999999998765 1 11111 0 00
Q ss_pred CCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEe
Q psy950 179 DENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKT 258 (407)
Q Consensus 179 ~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~ 258 (407)
.+. |+. |+. - .
T Consensus 308 ----~~~-------------------------------g~~---dg~-~------------------------------~ 318 (409)
T 3hrp_A 308 ----TQK-------------------------------TVQ---DGL-R------------------------------E 318 (409)
T ss_dssp ----TCC-------------------------------SCB---CEE-G------------------------------G
T ss_pred ----CCC-------------------------------CcC---CCc-c------------------------------c
Confidence 000 000 000 0 0
Q ss_pred ecCCcceEEEEEEcCCCEEEEEEe-cCCceEEEEeCCCCcccc--c----------------CCCCccEEEEeccCCeEE
Q psy950 259 VSNLTNVVGVEFDYADDKILFTQI-RPWAKIAWIPTTNPSSAS--S----------------NLTNVVGVEFDYADDKIL 319 (407)
Q Consensus 259 ~~~~~~~~ald~d~~~~~lywsd~-~~~~~I~~~~~~~~~~~~--~----------------~~~~~~glAvDwi~~~LY 319 (407)
...+..+.+|++|+.++ ||++|. .. .+|+++++....... + +. .|.|||+|.- ++||
T Consensus 319 ~~~~~~P~gia~d~dG~-lyvad~~~~-~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~-~P~giavd~~-g~ly 394 (409)
T 3hrp_A 319 EALFAQPNGMTVDEDGN-FYIVDGFKG-YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFN-YPYDICYDGE-GGYW 394 (409)
T ss_dssp GCBCSSEEEEEECTTCC-EEEEETTTT-CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBS-SEEEEEECSS-SEEE
T ss_pred ccEeCCCeEEEEeCCCC-EEEEeCCCC-CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeC-CceEEEEcCC-CCEE
Confidence 00123467888887766 999998 87 889998843332221 1 44 7999999998 8999
Q ss_pred EEeCCCCCeEEEEEC
Q psy950 320 FTQIRPWAKIAWIPT 334 (407)
Q Consensus 320 wtd~~~~~~I~v~~~ 334 (407)
++|... ++|.++++
T Consensus 395 Vad~~n-~~Ir~i~~ 408 (409)
T 3hrp_A 395 IAEAWG-KAIRKYAV 408 (409)
T ss_dssp EEESTT-CEEEEEEE
T ss_pred EEECCC-CeEEEEEe
Confidence 999999 89988765
No 34
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.49 E-value=9.9e-12 Score=114.59 Aligned_cols=217 Identities=15% Similarity=0.204 Sum_probs=141.9
Q ss_pred CceeEEEeCCCCeEEE-EeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcc
Q psy950 78 MPRDLTIDMQTHDVYW-VDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITL 154 (407)
Q Consensus 78 ~P~glaiD~~~~~lYw-~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~ 154 (407)
.|.+|++|+. ++||+ ++...+.|.+++.++.....+. .....|.+|++++ +.||+++. .+.|.+.+..+ . .
T Consensus 25 ~p~~i~~~~~-g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~-~---~ 98 (270)
T 1rwi_B 25 SPSGVAVDSA-GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGS-N---N 98 (270)
T ss_dssp CEEEEEECTT-CCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTC-S---C
T ss_pred CccceEECCC-CCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCC-c---e
Confidence 9999999985 46999 9888999999988765544432 4557899999986 68999998 77899888765 1 1
Q ss_pred cEEcc-cCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccccee
Q psy950 155 PTPIR-TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEY 233 (407)
Q Consensus 155 ~~~i~-~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~ 233 (407)
...+. ..+..|.+|.+. +++.
T Consensus 99 ~~~~~~~~~~~p~~i~~~--------------------------------------------------~~g~-------- 120 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVD--------------------------------------------------TQGA-------- 120 (270)
T ss_dssp CEECCCCSCSSEEEEEEC--------------------------------------------------TTCC--------
T ss_pred EeeeecCCcCCCcceEEC--------------------------------------------------CCCC--------
Confidence 22221 112223333221 1111
Q ss_pred eeeec--ccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCcc
Q psy950 234 LVFST--RTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVV 307 (407)
Q Consensus 234 Ll~s~--~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~ 307 (407)
|+++. ...|..+...... ...........+.+|.+|+.+ +||+++... +.|.+++.++..... .+. .|.
T Consensus 121 l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~p~ 195 (270)
T 1rwi_B 121 VYVADRGNNRVVKLAAGSKT--QTVLPFTGLNDPDGVAVDNSG-NVYVTDTDN-NRVVKLEAESNNQVVLPFTDIT-APW 195 (270)
T ss_dssp EEEEEGGGTEEEEECTTCCS--CEECCCCSCCSCCCEEECTTC-CEEEEEGGG-TEEEEECTTTCCEEECCCSSCC-SEE
T ss_pred EEEEECCCCEEEEEECCCce--eEeeccccCCCceeEEEeCCC-CEEEEECCC-CEEEEEecCCCceEeecccCCC-Cce
Confidence 22221 1234333211111 111111223456788899755 599999877 789999988765432 344 899
Q ss_pred EEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--c-ccCCCceeEEEEcCCCCeEEEEeCCC
Q psy950 308 GVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--A-SSNLTNVVGVEFDYADDKILFTQIRP 366 (407)
Q Consensus 308 glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l-~~~l~~P~~iavdp~~g~lywtd~~~ 366 (407)
+|++|.-+ +||+++... ++|.+++.++... + ...+..|.+|++||. |.||++++++
T Consensus 196 ~i~~d~~g-~l~v~~~~~-~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~ 254 (270)
T 1rwi_B 196 GIAVDEAG-TVYVTEHNT-NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD-RTVYVADRGN 254 (270)
T ss_dssp EEEECTTC-CEEEEETTT-SCEEEECTTCSCCEECCCCSCSCEEEEEECTT-CCEEEEEGGG
T ss_pred EEEECCCC-CEEEEECCC-CcEEEEcCCCCcceeeccCCCCCceeEEECCC-CCEEEEECCC
Confidence 99999875 999999988 7899999887653 2 235688999999986 6799999754
No 35
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.47 E-value=5e-11 Score=113.26 Aligned_cols=229 Identities=10% Similarity=0.040 Sum_probs=156.9
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCC--eEEEEecCCCe
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLD--LIQKISYNGGN 110 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~--~I~~~~~dG~~ 110 (407)
..|.++++|+. |.|||+|.... +|.+.+.+|.. ..++.. -..|.||++|+. ++||++|...+ .|.+++.....
T Consensus 32 ~~pegia~~~~-g~lyv~d~~~~-~I~~~d~~g~~-~~~~~~-~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPD-GTIFVTNHEVG-EIVSITPDGNQ-QIHATV-EGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTT-SCEEEEETTTT-EEEEECTTCCE-EEEEEC-SSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCC-CCEEEEeCCCC-eEEEECCCCce-EEEEeC-CCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCe
Confidence 57999999994 78999998764 99999999853 334443 247999999986 45999997644 48887754444
Q ss_pred EEEEc--cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCC
Q psy950 111 RQIIR--RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRT 187 (407)
Q Consensus 111 ~~~~~--~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~ 187 (407)
.+.+. .....|.|+++.. +.+|.+|...+.|++++..+ + ...+.. .+....+
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~-~---~~~v~~-----------~~~~~~~---------- 161 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ-P---SGSIWL-----------EHPMLAR---------- 161 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT-T---EEEEEE-----------ECGGGSC----------
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC-C---cEeEEE-----------ECCcccc----------
Confidence 43333 3455678888655 67899998888898888653 1 111110 0000000
Q ss_pred CcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEE
Q psy950 188 GNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVG 267 (407)
Q Consensus 188 ~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~a 267 (407)
. .. ...+..+.+
T Consensus 162 -------------~-------------------~~------------------------------------~~~~~~png 173 (306)
T 2p4o_A 162 -------------S-------------------NS------------------------------------ESVFPAANG 173 (306)
T ss_dssp -------------S-------------------ST------------------------------------TCCSCSEEE
T ss_pred -------------c-------------------cc------------------------------------cCCCCcCCC
Confidence 0 00 000112334
Q ss_pred EEEEcCCCEEEEEEecCCceEEEEeCCCCccc----c--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--
Q psy950 268 VEFDYADDKILFTQIRPWAKIAWIPTTNPSSA----S--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS-- 339 (407)
Q Consensus 268 ld~d~~~~~lywsd~~~~~~I~~~~~~~~~~~----~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r-- 339 (407)
| ++.+++||++|... ++|.++.+++.... . ... .|.||++|.-+ +||.++... ++|.+++.+|...
T Consensus 174 i--s~dg~~lyv~d~~~-~~I~~~~~~~~g~~~~~~~~~~~~-~P~gi~vd~dG-~l~va~~~~-~~V~~~~~~G~~~~~ 247 (306)
T 2p4o_A 174 L--KRFGNFLYVSNTEK-MLLLRIPVDSTDKPGEPEIFVEQT-NIDDFAFDVEG-NLYGATHIY-NSVVRIAPDRSTTII 247 (306)
T ss_dssp E--EEETTEEEEEETTT-TEEEEEEBCTTSCBCCCEEEEESC-CCSSEEEBTTC-CEEEECBTT-CCEEEECTTCCEEEE
T ss_pred c--CcCCCEEEEEeCCC-CEEEEEEeCCCCCCCccEEEeccC-CCCCeEECCCC-CEEEEeCCC-CeEEEECCCCCEEEE
Confidence 5 44578999999988 88999988752111 1 334 89999999865 899999988 8999999887532
Q ss_pred --cccCCCceeEEEEc---CCCCeEEEEeCC
Q psy950 340 --ASSNLTNVVGVEFD---YADDKILFTQIR 365 (407)
Q Consensus 340 --l~~~l~~P~~iavd---p~~g~lywtd~~ 365 (407)
+...+..|.++++. |..+.||.++.+
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eecccccCCceEEEEecccCCCCEEEEECCC
Confidence 22356899999999 888999999974
No 36
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.47 E-value=1.4e-11 Score=123.27 Aligned_cols=118 Identities=10% Similarity=0.017 Sum_probs=89.7
Q ss_pred cCCCCCcceEEEeCCCCEEEEEEcCC---CCeEEEEeCCCCCe-EEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEE
Q psy950 29 TSFRSANTTSPFSPLPRLLYWIDYGQ---YPRIGKSYLDGSKW-TSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104 (407)
Q Consensus 29 ~~~~~~P~~iavdp~~g~lywtd~~~---~~~I~r~~~dG~~~-~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~ 104 (407)
...+..|.+||+|+..+ ||++|.+. ...+.+...++.-. ...+. .+..|.++++|+.+++|||+|...++|.++
T Consensus 178 ~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~ 255 (433)
T 4hw6_A 178 TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSY 255 (433)
T ss_dssp CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEE
T ss_pred ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEE
Confidence 44677899999999976 99999853 22466666555433 12222 467899999999999999999999999999
Q ss_pred ecC-CCeEEEEc--cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 105 SYN-GGNRQIIR--RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 105 ~~d-G~~~~~~~--~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
+.+ |.-...+. .....+++|++.. ++||++|...+.|.+++.+.
T Consensus 256 d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 256 DPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp CTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred ECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 998 55423332 3445678899986 46999999999999988764
No 37
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.46 E-value=7.8e-11 Score=113.10 Aligned_cols=259 Identities=7% Similarity=-0.049 Sum_probs=161.4
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCC-CCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLD-GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~d-G~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
..|.+|+++ .++||.+..... .|.+.+.. |.....+ . ....|.+|++++. ++||+++...+.|.+++......
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~-~v~viD~~t~~~~~~i-~-~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSH-VIFAIDINTFKEVGRI-T-GFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGT-EEEEEETTTCCEEEEE-E-CCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEE
T ss_pred ccceEEEEE--CCEEEEEEcCCC-EEEEEECcccEEEEEc-C-CCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeE
Confidence 358999997 689999998754 89999987 4433444 3 4578999999875 49999998889999999986654
Q ss_pred EEEccCCC------CceEEEEeCCEEEEEeCC-CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCc
Q psy950 112 QIIRRNLP------NPMGIAVHKSDVYWVDRN-LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC 184 (407)
Q Consensus 112 ~~~~~~~~------~P~~lav~~~~lYwtd~~-~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C 184 (407)
........ .|.+|++.+++||.+++. .+.|..++..+ + .....+..+ ..|.++.+.
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t-~--~~~~~i~~g-~~p~~i~~~------------- 180 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTET-D--KVVDELTIG-IQPTSLVMD------------- 180 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTT-T--EEEEEEECS-SCBCCCEEC-------------
T ss_pred EEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCC-C--eEEEEEEcC-CCccceEEc-------------
Confidence 32222233 899999999999999994 78999998775 2 111111100 111111110
Q ss_pred cCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcc
Q psy950 185 FRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTN 264 (407)
Q Consensus 185 ~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~ 264 (407)
+.+ ..-..|...+. ...... ....|..+........ ....+.....
T Consensus 181 ---------------~dG------~l~v~~~~~~~----~~~~~~--------~~~~v~~id~~t~~v~-~~~~~~~g~~ 226 (328)
T 3dsm_A 181 ---------------KYN------KMWTITDGGYE----GSPYGY--------EAPSLYRIDAETFTVE-KQFKFKLGDW 226 (328)
T ss_dssp ---------------TTS------EEEEEBCCBCT----TCSSCB--------CCCEEEEEETTTTEEE-EEEECCTTCC
T ss_pred ---------------CCC------CEEEEECCCcc----CCcccc--------CCceEEEEECCCCeEE-EEEecCCCCC
Confidence 000 01111111000 000000 0122343433221110 0112222346
Q ss_pred eEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cC-CCCccEEEEeccCCeEEEEe----CCCCCeEEEEECC
Q psy950 265 VVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SN-LTNVVGVEFDYADDKILFTQ----IRPWAKIAWIPTT 335 (407)
Q Consensus 265 ~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~-~~~~~glAvDwi~~~LYwtd----~~~~~~I~v~~~~ 335 (407)
+.+|++++.+++||+++. .|++++..+..... .. +..|.|||+|+.+++||.++ ... ++|.+++.+
T Consensus 227 p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~-~~V~v~d~~ 301 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQ-GIVYRYSPQ 301 (328)
T ss_dssp CEEEEECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSE-EEEEEECTT
T ss_pred ceeEEEecCCCEEEEEcc----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccC-CEEEEECCC
Confidence 889999999999999875 48888887654321 11 23899999999999999999 777 899999998
Q ss_pred CCcc-cccCCCceeEEEEc
Q psy950 336 NPSS-ASSNLTNVVGVEFD 353 (407)
Q Consensus 336 ~~~r-l~~~l~~P~~iavd 353 (407)
|... ...--..|.+|+.-
T Consensus 302 g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 302 GKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp CCEEEEEEEEESEEEEEEE
T ss_pred CCEEEEEEeccCcceEEEe
Confidence 5432 22334678887754
No 38
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.46 E-value=3.2e-11 Score=115.62 Aligned_cols=117 Identities=13% Similarity=0.048 Sum_probs=96.6
Q ss_pred CCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCC--eEEEE--------eCCCCCceeEEEeCCCCeEEEEeC-CC
Q psy950 30 SFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSK--WTSIV--------SNGISMPRDLTIDMQTHDVYWVDA-KL 98 (407)
Q Consensus 30 ~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~--~~~l~--------~~~~~~P~glaiD~~~~~lYw~d~-~~ 98 (407)
..+..|.+||+||. |.||++|.... +|.+.+.+|.. ...+- ...+..|.+|++|+.+++||++|. ..
T Consensus 88 ~~~~~p~gia~d~~-g~l~v~d~~~~-~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 88 NLFYLPHGLSIDTD-GNYWVTDVALH-QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp TTCSSEEEEEECTT-SCEEEEETTTT-EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred CccCCceEEEECCC-CCEEEEECCCC-EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 34678999999986 66999999865 99999999983 44443 233558999999998899999997 79
Q ss_pred CeEEEEecCCCeEEEEc----------cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 99 DLIQKISYNGGNRQIIR----------RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 99 ~~I~~~~~dG~~~~~~~----------~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
++|.+.+.+|.....+. ..+..|.+|+++. +.||++|+.+++|.+.+..+
T Consensus 166 ~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 166 SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 99999999998877664 2456799999985 79999999999999988774
No 39
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.44 E-value=2.3e-11 Score=118.42 Aligned_cols=255 Identities=12% Similarity=0.067 Sum_probs=158.9
Q ss_pred cceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe-----CCCCCceeEEEeCC---CCeEEEE
Q psy950 23 KKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS-----NGISMPRDLTIDMQ---THDVYWV 94 (407)
Q Consensus 23 ~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~-----~~~~~P~glaiD~~---~~~lYw~ 94 (407)
.+..++..++..|++|+++|. |.||+++.. .+|.+.+ +|.. +.+.. .+...|.||++++. +++||++
T Consensus 21 ~~~~~va~~l~~P~~ia~~pd-G~l~V~e~~--g~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 21 LRVEEVVGGLEVPWALAFLPD-GGMLIAERP--GRIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp CCEEEEECCCSCEEEEEECTT-SCEEEEETT--TEEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred cEEEEEECCCCCceEEEEcCC-CeEEEEeCC--CeEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEE
Confidence 355566778999999999997 679999986 5999998 7753 33322 23568999999998 8999999
Q ss_pred eCCC-----CeEEEEecCCC---eEEEEcc-------CCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEc
Q psy950 95 DAKL-----DLIQKISYNGG---NRQIIRR-------NLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPI 158 (407)
Q Consensus 95 d~~~-----~~I~~~~~dG~---~~~~~~~-------~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i 158 (407)
+... ++|.++++++. ..+++.. ....|.+|++.. ++||+++...... .. ..+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~-----~~---~~d---- 163 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYER-----EL---AQD---- 163 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCG-----GG---GGC----
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCC-----cc---ccC----
Confidence 9864 78999999864 2333331 234678999976 7999997543210 00 000
Q ss_pred ccCCCCce-eeEEeeec-CCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeee
Q psy950 159 RTGLSGLR-DIAIFDIV-NQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVF 236 (407)
Q Consensus 159 ~~~~~~p~-~i~i~~~~-~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~ 236 (407)
..... .|.-+++. +.| ..||-.. ..+
T Consensus 164 ---~~~~~g~I~ri~~dG~~p--~~npf~~-----------------------------------~~~------------ 191 (352)
T 2ism_A 164 ---LASLGGKILRLTPEGEPA--PGNPFLG-----------------------------------RRG------------ 191 (352)
T ss_dssp ---TTCSSSEEEEECTTSSBC--TTCTTTT-----------------------------------CTT------------
T ss_pred ---CCCCceEEEEEcCCCCCC--CCCcccC-----------------------------------CCC------------
Confidence 00000 00001000 000 0011000 000
Q ss_pred ecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCce--------EEEEeCCCC------------
Q psy950 237 STRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAK--------IAWIPTTNP------------ 296 (407)
Q Consensus 237 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~--------I~~~~~~~~------------ 296 (407)
. .+.....+++++.++++|+.++.||++|... .. |.++.-.+.
T Consensus 192 -------------~---~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~-~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 192 -------------A---RPEVYSLGHRNPQGLAWHPKTGELFSSEHGP-SGEQGYGHDEVNLIVPGGNYGWPRVVGRGND 254 (352)
T ss_dssp -------------S---CTTEEEECCSEECCCEECTTTCCEEEEEECC-------CCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred -------------C---CccEEEEcCCCcccEEEECCCCCEEEEEcCC-CCCCCCCCeEEEEeccCCcCCCCcccCCCCC
Confidence 0 0001122566788899999888999999876 43 666543220
Q ss_pred --cccc--c--CCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc---------ccccCCCceeEEEEcCCCCeEEE
Q psy950 297 --SSAS--S--NLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS---------SASSNLTNVVGVEFDYADDKILF 361 (407)
Q Consensus 297 --~~~~--~--~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~---------rl~~~l~~P~~iavdp~~g~lyw 361 (407)
...+ . -...|.||++ | .++||.++... ++|.++++++.. .+.....+|++|+++|. |.||.
T Consensus 255 ~~~~~p~~~~~~~~ap~G~~~-~-~G~l~v~~~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~lyv 330 (352)
T 2ism_A 255 PRYRDPLYFWPQGFPPGNLAF-F-RGDLYVAGLRG-QALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD-GALYV 330 (352)
T ss_dssp TTSCCCSEECTTCCCEEEEEE-E-TTEEEEEETTT-TEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT-SCEEE
T ss_pred CCCcCCeEecCCCCCCcceEE-E-CCEEEEEECCC-CEEEEEEECCCCcceeecchheecccCCCeeEEEECCC-CcEEE
Confidence 0001 1 1126889999 3 67999999988 799999887432 13345689999999994 79999
Q ss_pred EeCCCC
Q psy950 362 TQIRPW 367 (407)
Q Consensus 362 td~~~~ 367 (407)
+++...
T Consensus 331 ~~~~~~ 336 (352)
T 2ism_A 331 TTSNRD 336 (352)
T ss_dssp EECSTT
T ss_pred EEeCCC
Confidence 998654
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.43 E-value=1.5e-09 Score=103.43 Aligned_cols=268 Identities=13% Similarity=0.113 Sum_probs=176.2
Q ss_pred CCcceEEEeCCCCEEEEEEcCC-----CCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQ-----YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN 107 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~-----~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d 107 (407)
..|.+++++|..++||+++.+. ..+|...+.+.......+.. -..|.++++++.+++||+++...+.|..++..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 4689999999999999998752 34899999876554444442 24699999999999999999999999999987
Q ss_pred CCeE-EEEc-cCC--------CCceEEEEeC--CEEEEEeCC-CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeec
Q psy950 108 GGNR-QIIR-RNL--------PNPMGIAVHK--SDVYWVDRN-LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIV 174 (407)
Q Consensus 108 G~~~-~~~~-~~~--------~~P~~lav~~--~~lYwtd~~-~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~ 174 (407)
.... ..+. ... .+|.++++.. +++|.+++. .+.|...+..+ + .....+...-..|.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~-~--~~~~~~~~~~~~~~~------- 189 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN-I--KLKTAIQNTGKMSTG------- 189 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT-T--EEEEEECCCCTTCCC-------
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC-C--ceEEEecCCCCccce-------
Confidence 5544 3333 111 1378899965 689999854 56788888664 1 111111000000111
Q ss_pred CCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceEEeecCCCCCe
Q psy950 175 NQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIRALHLDPTLTA 253 (407)
Q Consensus 175 ~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~~i~l~~~~~~ 253 (407)
+++ .+|++ +|+++. ...|..+.+......
T Consensus 190 --------------------~~~-----------------------s~dg~-------~l~~~~~~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 190 --------------------LAL-----------------------DSEGK-------RLYTTNADGELITIDTADNKIL 219 (353)
T ss_dssp --------------------CEE-----------------------ETTTT-------EEEEECTTSEEEEEETTTTEEE
T ss_pred --------------------EEE-----------------------CCCCC-------EEEEEcCCCeEEEEECCCCeEE
Confidence 111 11221 111111 122333332221110
Q ss_pred eeeEee---cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCe
Q psy950 254 VPFKTV---SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAK 328 (407)
Q Consensus 254 ~~~~~~---~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~ 328 (407)
. .... .....+.++++++.++++|+++... +.|..++..+..... .++ .+.++++++.++.||.++... ++
T Consensus 220 ~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~-~~ 295 (353)
T 3vgz_A 220 S-RKKLLDDGKEHFFINISLDTARQRAFITDSKA-AEVLVVDTRNGNILAKVAAP-ESLAVLFNPARNEAYVTHRQA-GK 295 (353)
T ss_dssp E-EEECCCSSSCCCEEEEEEETTTTEEEEEESSS-SEEEEEETTTCCEEEEEECS-SCCCEEEETTTTEEEEEETTT-TE
T ss_pred E-EEEcCCCCCCcccceEEECCCCCEEEEEeCCC-CEEEEEECCCCcEEEEEEcC-CCceEEECCCCCEEEEEECCC-Ce
Confidence 0 0111 0123466789999999999999887 889999987665443 455 678999999999999999888 89
Q ss_pred EEEEECCCCcc--cccCCCceeEEEEcCCCCeEEEEeCC
Q psy950 329 IAWIPTTNPSS--ASSNLTNVVGVEFDYADDKILFTQIR 365 (407)
Q Consensus 329 I~v~~~~~~~r--l~~~l~~P~~iavdp~~g~lywtd~~ 365 (407)
|.++++..... ....-..|.+++++|...+||.+...
T Consensus 296 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 296 VSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 99999876653 23344689999999998899999753
No 41
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.38 E-value=1.5e-10 Score=116.91 Aligned_cols=115 Identities=11% Similarity=0.054 Sum_probs=88.5
Q ss_pred CCCcceEEE-------eCCCCEEEEEEcCC-----CCeEEEEeCC--CCCe-----EEEEeCCCCCceeEEEeCCCCeEE
Q psy950 32 RSANTTSPF-------SPLPRLLYWIDYGQ-----YPRIGKSYLD--GSKW-----TSIVSNGISMPRDLTIDMQTHDVY 92 (407)
Q Consensus 32 ~~~P~~iav-------dp~~g~lywtd~~~-----~~~I~r~~~d--G~~~-----~~l~~~~~~~P~glaiD~~~~~lY 92 (407)
+..|++|++ |+..++||.+|+.. ...|.+..-+ |.-. ..+. ....|+|+++|+.+++||
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LY 262 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELY 262 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEE
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEE
Confidence 457999999 99988999999975 2357777433 3332 2333 356899999999999999
Q ss_pred EEeCCCCeEEEEecC-------CCeE-------------EEE-ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 93 WVDAKLDLIQKISYN-------GGNR-------------QII-RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 93 w~d~~~~~I~~~~~d-------G~~~-------------~~~-~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
++|...++|.+++++ +... +++ ......|++|+++. +.||++|+..++|.+++.++
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 999999999999997 3222 222 24456799999987 46999999999999988765
No 42
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.38 E-value=4.8e-10 Score=109.18 Aligned_cols=252 Identities=12% Similarity=0.029 Sum_probs=159.8
Q ss_pred cceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe-----CCCCCceeEEEeCC---CCeEEEE
Q psy950 23 KKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS-----NGISMPRDLTIDMQ---THDVYWV 94 (407)
Q Consensus 23 ~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~-----~~~~~P~glaiD~~---~~~lYw~ 94 (407)
.+..++..++..|++|+++|. |.||+++.. .+|.+.+.+|. +.+.. .+...|.||++++. +++||++
T Consensus 19 ~~~~~va~~l~~P~~ia~~pd-G~l~V~e~~--g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLGG-GRYLVTERP--GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEET-TEEEEEETT--TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred eEEEEEeCCCCCCeEEEEcCC-CeEEEEeCC--CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 455566778999999999996 789999986 59999987776 33332 24567999999998 8999999
Q ss_pred eCC---C----CeEEEEecCCC-----eEEEEc-----cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccE
Q psy950 95 DAK---L----DLIQKISYNGG-----NRQIIR-----RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPT 156 (407)
Q Consensus 95 d~~---~----~~I~~~~~dG~-----~~~~~~-----~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~ 156 (407)
+.. . ++|.++++++. ..+++. .....|.+|++.. ++||++....... ..
T Consensus 94 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~-----~~-------- 160 (354)
T 3a9g_A 94 ASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADP-----RL-------- 160 (354)
T ss_dssp EEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCG-----GG--------
T ss_pred EeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCC-----cc--------
Confidence 874 3 68999998876 234432 2344678899876 7899986432210 00
Q ss_pred EcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeee
Q psy950 157 PIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVF 236 (407)
Q Consensus 157 ~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~ 236 (407)
.|. +-.. ++. . +.+.+|+.- ....+|
T Consensus 161 ------------------~~d-----~~~~--~G~-------------------I------~ri~~dG~~-p~~npf--- 186 (354)
T 3a9g_A 161 ------------------AQD-----LSSL--AGK-------------------I------LRVDEEGRP-PADNPF--- 186 (354)
T ss_dssp ------------------GTC-----TTCC--SSE-------------------E------EEECTTSCC-CTTSSS---
T ss_pred ------------------ccC-----CCCC--CeE-------------------E------EEEcCCCCC-CCCCCC---
Confidence 000 0000 000 0 001111110 000000
Q ss_pred ecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecC--CceEEEEeCCCC---------c-----ccc
Q psy950 237 STRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRP--WAKIAWIPTTNP---------S-----SAS 300 (407)
Q Consensus 237 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~--~~~I~~~~~~~~---------~-----~~~ 300 (407)
+ . +.....+++++.+|++|+.++.||++|... ...|.++.-.+. . ..+
T Consensus 187 ~-~---------------~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 187 P-N---------------SPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp T-T---------------CCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCC
T ss_pred C-C---------------CcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCC
Confidence 0 0 011123567888999999889999999865 134655542210 0 001
Q ss_pred --c---CCCCccEEEE-------eccCCeEEEEeCCCCCeEEEEECCCCc------cccc-CCCceeEEEEcCCCCeEEE
Q psy950 301 --S---NLTNVVGVEF-------DYADDKILFTQIRPWAKIAWIPTTNPS------SASS-NLTNVVGVEFDYADDKILF 361 (407)
Q Consensus 301 --~---~~~~~~glAv-------Dwi~~~LYwtd~~~~~~I~v~~~~~~~------rl~~-~l~~P~~iavdp~~g~lyw 361 (407)
. ....|.||++ +| .++||+++... ++|.++++++.. ++.. ...+|++|+++|. |.||.
T Consensus 251 ~~~~~~~~~ap~G~~~y~g~~fp~~-~G~l~v~~~~~-~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G~lyv 327 (354)
T 3a9g_A 251 VIDTGSETWAPSGASFVHGDMFPGL-RGWLLIACLRG-SMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-GGILI 327 (354)
T ss_dssp SEECTTCCCCEEEEEECCSSSCGGG-TTEEEEEETTT-TEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-SCEEE
T ss_pred EeecCCCCcCCcceEEECCCCCccc-CCcEEEEEcCC-CEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-CcEEE
Confidence 1 1237999999 65 56999999988 899999988532 2333 3579999999995 79999
Q ss_pred EeCC
Q psy950 362 TQIR 365 (407)
Q Consensus 362 td~~ 365 (407)
+++.
T Consensus 328 ~~~~ 331 (354)
T 3a9g_A 328 STSN 331 (354)
T ss_dssp EECT
T ss_pred EEeC
Confidence 9974
No 43
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.37 E-value=3.4e-10 Score=108.00 Aligned_cols=239 Identities=11% Similarity=0.118 Sum_probs=150.6
Q ss_pred EEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCC-------------------CCCceeEEEeC
Q psy950 26 KLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNG-------------------ISMPRDLTIDM 86 (407)
Q Consensus 26 ~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~-------------------~~~P~glaiD~ 86 (407)
..+...+..|.+|++|+. |.+||++... .+|.+.+.++...+.+.... ...|.||++|+
T Consensus 12 i~~~g~~~~p~~i~~d~~-g~~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 12 ILIEAPSYAPNSFTFDST-NKGFYTSVQD-GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL 89 (322)
T ss_dssp EEEECSSSCCCCEECCTT-CSSEEEECTT-SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred eecCCccCCceEEEEcCC-CCEEEEEcCC-CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcC
Confidence 334455789999999997 7888888765 49999998876665554211 23699999998
Q ss_pred CCCeEEEEeCCCCeEEEEecCCCeEEEEc-----cCCCCceEEEEeC--CEEEEEeCCC-----------------CeEE
Q psy950 87 QTHDVYWVDAKLDLIQKISYNGGNRQIIR-----RNLPNPMGIAVHK--SDVYWVDRNL-----------------RTVY 142 (407)
Q Consensus 87 ~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-----~~~~~P~~lav~~--~~lYwtd~~~-----------------~~I~ 142 (407)
..++||++|... .|.+++.++...+.+. ..+..|.+|+++. +.||++|... +.|+
T Consensus 90 ~~g~l~v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 90 QNNQLYIVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TTTEEEEEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred CCCcEEEEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 778999999864 5888888865554443 2356799999986 7999999763 2344
Q ss_pred EEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccC
Q psy950 143 KASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222 (407)
Q Consensus 143 ~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~ 222 (407)
+.+..+ + ..+.+...+. .|.|..+.+
T Consensus 169 ~~d~~~-~---~~~~~~~~~~--------------------------------------------------~p~gia~~~ 194 (322)
T 2fp8_A 169 KYDPST-K---ETTLLLKELH--------------------------------------------------VPGGAEVSA 194 (322)
T ss_dssp EEETTT-T---EEEEEEEEES--------------------------------------------------CCCEEEECT
T ss_pred EEeCCC-C---EEEEeccCCc--------------------------------------------------cCcceEECC
Confidence 444332 1 1111111111 122222233
Q ss_pred CCCcccccceeeeeec--ccceEEeecCCCCC--eeeeEeecCCcceEEEEEEcCCCEEEEEEec----------CCceE
Q psy950 223 DPKKCTTMDEYLVFST--RTEIRALHLDPTLT--AVPFKTVSNLTNVVGVEFDYADDKILFTQIR----------PWAKI 288 (407)
Q Consensus 223 d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~--~~~~~~~~~~~~~~ald~d~~~~~lywsd~~----------~~~~I 288 (407)
|+. +|+++. ...|..+.+..... ...+.... . +.++.+|..+ .||+++.. . ..|
T Consensus 195 dg~-------~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~--g-P~gi~~d~~G-~l~va~~~~~~~~~~~~~~-~~v 262 (322)
T 2fp8_A 195 DSS-------FVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP--N-PGNIKRNADG-HFWVSSSEELDGNMHGRVD-PKG 262 (322)
T ss_dssp TSS-------EEEEEEGGGTEEEEEESSSTTTTCEEEEEECS--S-EEEEEECTTS-CEEEEEEEETTSSTTSCEE-EEE
T ss_pred CCC-------EEEEEeCCCCeEEEEECCCCcCCccceEEeCC--C-CCCeEECCCC-CEEEEecCcccccccCCCc-cEE
Confidence 332 233332 34677777654211 11111111 2 7889999765 59999866 3 568
Q ss_pred EEEeCCCCcccc-----c--CCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCC
Q psy950 289 AWIPTTNPSSAS-----S--NLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNP 337 (407)
Q Consensus 289 ~~~~~~~~~~~~-----~--~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~ 337 (407)
.+++-+|..... + +. .+.+++.+ .++||+++... +.|.+++++..
T Consensus 263 ~~~d~~G~~~~~~~~~~g~~~~-~~~~~~~~--~g~L~v~~~~~-~~i~~~~~~~~ 314 (322)
T 2fp8_A 263 IKFDEFGNILEVIPLPPPFAGE-HFEQIQEH--DGLLYIGTLFH-GSVGILVYDKK 314 (322)
T ss_dssp EEECTTSCEEEEEECCTTTTTS-CCCEEEEE--TTEEEEECSSC-SEEEEEEC---
T ss_pred EEECCCCCEEEEEECCCCCccc-cceEEEEe--CCEEEEeecCC-CceEEEecccc
Confidence 888877653321 1 34 68888875 78999999988 89999987654
No 44
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.34 E-value=2.6e-09 Score=99.23 Aligned_cols=229 Identities=15% Similarity=0.164 Sum_probs=148.2
Q ss_pred CCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC
Q psy950 30 SFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG 109 (407)
Q Consensus 30 ~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~ 109 (407)
.....|.+|++|+. |.||+++.+.. +|.+.+.+|.-...........|.+|++|+ .++||+++...+.|.+++.+|.
T Consensus 59 ~~~~~~~~i~~~~~-g~l~v~~~~~~-~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~ 135 (300)
T 2qc5_A 59 TPDAKVMCLIVSSL-GDIWFTENGAN-KIGKLSKKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGT 135 (300)
T ss_dssp STTCCEEEEEECTT-SCEEEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSC
T ss_pred CCCCcceeEEECCC-CCEEEEecCCC-eEEEECCCCCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCC
Confidence 34567999999975 78999987654 899999986543222222346899999997 6789999998899999999966
Q ss_pred eEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcc--cCCCCceeeEEeeecCCCCCCCCCcc
Q psy950 110 NRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIR--TGLSGLRDIAIFDIVNQPPDENNPCF 185 (407)
Q Consensus 110 ~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~--~~~~~p~~i~i~~~~~qp~~~~n~C~ 185 (407)
...... .....|.+|+++. +.||+++...+.|.+.+..+ . ...+. .....|.+|.+
T Consensus 136 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g--~---~~~~~~~~~~~~~~~i~~--------------- 195 (300)
T 2qc5_A 136 IYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTG--K---LEEYPLPTNAAAPVGITS--------------- 195 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC--C---EEEEECSSTTCCEEEEEE---------------
T ss_pred EEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCC--c---EEEeeCCCCCCCcceEEE---------------
Confidence 554323 3567899999986 78999999888999988742 2 11111 11111222211
Q ss_pred CCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEee-cCC
Q psy950 186 RTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTV-SNL 262 (407)
Q Consensus 186 ~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~-~~~ 262 (407)
.+++. |++++ ...|..+..... .. . ..+ ...
T Consensus 196 -----------------------------------d~~g~--------l~v~~~~~~~i~~~~~~g~-~~-~-~~~~~~~ 229 (300)
T 2qc5_A 196 -----------------------------------GNDGA--------LWFVEIMGNKIGRITTTGE-IS-E-YDIPTPN 229 (300)
T ss_dssp -----------------------------------CTTSS--------EEEEETTTTEEEEECTTCC-EE-E-EECSSTT
T ss_pred -----------------------------------CCCCC--------EEEEccCCCEEEEEcCCCc-EE-E-EECCCCC
Confidence 11111 22222 123444443111 10 0 111 234
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEEC
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPT 334 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~ 334 (407)
..+.++.+|..+ +||+++... +.|.+++.++..... ... .|.+|++|.- ++||+++. . .|.+++.
T Consensus 230 ~~~~~i~~d~~g-~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~-~~~~i~~~~~-g~l~v~~~-~--~i~~~~p 298 (300)
T 2qc5_A 230 ARPHAITAGKNS-EIWFTEWGA-NQIGRITNDNTIQEYQLQTENA-EPHGITFGKD-GSVWFALK-C--KIGKLNL 298 (300)
T ss_dssp CCEEEEEECSTT-CEEEEETTT-TEEEEECTTSCEEEEECCSTTC-CCCCEEECTT-SCEEEECS-S--EEEEEEE
T ss_pred CCceEEEECCCC-CEEEeccCC-CeEEEECCCCcEEEEECCccCC-ccceeEeCCC-CCEEEEcc-C--ceEEeCC
Confidence 567889999764 599999877 789999886543221 234 8999999976 56999987 4 5777764
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.32 E-value=5.1e-09 Score=97.20 Aligned_cols=230 Identities=15% Similarity=0.155 Sum_probs=147.9
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCe
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN 110 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~ 110 (407)
....|.+|++|+. |.+|+++.... .|.+.+.+|.-...........|.+|++|+ .++||+++...+.|.+++.+|..
T Consensus 55 ~~~~~~~i~~~~~-g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISSD-GEVWFTENAAN-KIGRITKKGIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKI 131 (299)
T ss_dssp TTCCEEEEEECTT-SCEEEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCE
T ss_pred ccCceeeEEECCC-CCEEEeCCCCC-eEEEECCCCcEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCE
Confidence 4567999999985 78999987653 899999886532222222355899999997 57899999888999999997765
Q ss_pred EEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEc--ccCCCCceeeEEeeecCCCCCCCCCccC
Q psy950 111 RQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPI--RTGLSGLRDIAIFDIVNQPPDENNPCFR 186 (407)
Q Consensus 111 ~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i--~~~~~~p~~i~i~~~~~qp~~~~n~C~~ 186 (407)
..... .....|.+|+++. +.+|+++...+.|.+.+. . +. ...+ ......|.+|.
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~---~~~~~~~~~~~~~~~i~----------------- 189 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GD---ITEFKIPTPASGPVGIT----------------- 189 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CC---EEEEECSSTTCCEEEEE-----------------
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-Cc---EEEeeCCCCCCcceeEE-----------------
Confidence 54433 3567899999986 799999988889999887 3 22 1111 00111111111
Q ss_pred CCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEee-cCCc
Q psy950 187 TGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTV-SNLT 263 (407)
Q Consensus 187 ~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~-~~~~ 263 (407)
+ .+++. |++++ ...|..+.. ..... .... ....
T Consensus 190 ----------~-----------------------~~~g~--------l~v~~~~~~~i~~~~~-~g~~~--~~~~~~~~~ 225 (299)
T 2z2n_A 190 ----------K-----------------------GNDDA--------LWFVEIIGNKIGRITT-SGEIT--EFKIPTPNA 225 (299)
T ss_dssp ----------E-----------------------CTTSS--------EEEEETTTTEEEEECT-TCCEE--EEECSSTTC
T ss_pred ----------E-----------------------CCCCC--------EEEEccCCceEEEECC-CCcEE--EEECCCCCC
Confidence 1 11111 22222 234444444 11111 1111 1345
Q ss_pred ceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCC
Q psy950 264 NVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 264 ~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
.+.++.+|..+ +||+++... +.|.+++.++..... ... .|.+|++ -.++||+++. . +.|.+++...
T Consensus 226 ~~~~i~~~~~g-~l~v~~~~~-~~i~~~d~~g~~~~~~~~~~~~-~~~~i~~--~~g~l~v~~~-~-~~l~~~~~~~ 295 (299)
T 2z2n_A 226 RPHAITAGAGI-DLWFTEWGA-NKIGRLTSNNIIEEYPIQIKSA-EPHGICF--DGETIWFAME-C-DKIGKLTLIK 295 (299)
T ss_dssp CEEEEEECSTT-CEEEEETTT-TEEEEEETTTEEEEEECSSSSC-CEEEEEE--CSSCEEEEET-T-TEEEEEEEC-
T ss_pred CceeEEECCCC-CEEEeccCC-ceEEEECCCCceEEEeCCCCCC-ccceEEe--cCCCEEEEec-C-CcEEEEEcCc
Confidence 67889999764 599998776 789998886532211 234 8999999 6788999987 3 5788876543
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=1.5e-09 Score=104.11 Aligned_cols=289 Identities=9% Similarity=0.040 Sum_probs=173.3
Q ss_pred EEEEEcCC----CCeEEEEeCCCCCeEE-EE----eCCC-CCceeEEEeCCCCeEEEEeCCCCeEEEEecCC-CeEEEEc
Q psy950 47 LYWIDYGQ----YPRIGKSYLDGSKWTS-IV----SNGI-SMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIR 115 (407)
Q Consensus 47 lywtd~~~----~~~I~r~~~dG~~~~~-l~----~~~~-~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG-~~~~~~~ 115 (407)
+|.++.+. ...|...+.+....+. +. ...+ ..|.+|++| +++||++....+.|.+++... .....+
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i- 80 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI- 80 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE-
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc-
Confidence 56666541 3467776665322111 10 0123 258899997 589999999999999999974 443444
Q ss_pred cCCCCceEEEE-eCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccc
Q psy950 116 RNLPNPMGIAV-HKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQ 194 (407)
Q Consensus 116 ~~~~~P~~lav-~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~ 194 (407)
.....|.+|++ .++++|+++...+.|.+++..+ + .....+..+.. ..+ ...| .+
T Consensus 81 ~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-~--~~~~~i~~g~~----------~~~---~~~p---------~~ 135 (328)
T 3dsm_A 81 TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-Y--EITGYIECPDM----------DME---SGST---------EQ 135 (328)
T ss_dssp ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT-T--EEEEEEECTTC----------CTT---TCBC---------CC
T ss_pred CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC-C--eEEEEEEcCCc----------ccc---CCCc---------ce
Confidence 45789999999 6689999997778899988765 2 11111110000 000 0011 11
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec---ccceEEeecCCCCCeeeeEeecCCcceEEEEEE
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST---RTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFD 271 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~---~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d 271 (407)
+++. + + .|+++. ...|..+.+.... ....+.....+.++.+|
T Consensus 136 i~~~--~----------------------~--------~lyv~~~~~~~~v~viD~~t~~---~~~~i~~g~~p~~i~~~ 180 (328)
T 3dsm_A 136 MVQY--G----------------------K--------YVYVNCWSYQNRILKIDTETDK---VVDELTIGIQPTSLVMD 180 (328)
T ss_dssp EEEE--T----------------------T--------EEEEEECTTCCEEEEEETTTTE---EEEEEECSSCBCCCEEC
T ss_pred EEEE--C----------------------C--------EEEEEcCCCCCEEEEEECCCCe---EEEEEEcCCCccceEEc
Confidence 1110 0 0 122221 2234444433221 11122223445677788
Q ss_pred cCCCEEEEEEecC---------CceEEEEeCCCCcccc--cC--CCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc
Q psy950 272 YADDKILFTQIRP---------WAKIAWIPTTNPSSAS--SN--LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS 338 (407)
Q Consensus 272 ~~~~~lywsd~~~---------~~~I~~~~~~~~~~~~--~~--~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~ 338 (407)
+. +++|++.... .+.|++++..+..... .+ +..|.+||+++-++.||+++. +|.+++..+..
T Consensus 181 ~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~ 255 (328)
T 3dsm_A 181 KY-NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----DIWRMPVEADR 255 (328)
T ss_dssp TT-SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----SEEEEETTCSS
T ss_pred CC-CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----EEEEEECCCCc
Confidence 64 5688776532 1579999887655432 22 337999999999999999987 48999987654
Q ss_pred c----ccc-CCCceeEEEEcCCCCeEEEEeCCCCCcccccCCCCCCCcceeEEEeCCCccceeeccchhhcc
Q psy950 339 S----ASS-NLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASVNTILSRGKDEKAKIENEQDLGR 405 (407)
Q Consensus 339 r----l~~-~l~~P~~iavdp~~g~lywtd~~~~~~ia~~dg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 405 (407)
. ... ....|.+|++||..|+||.+++.+-..=..+...+++|..+.++.+.. .|-.+.-+-+|.|
T Consensus 256 ~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G~--~P~~~~~~~~~~~ 325 (328)
T 3dsm_A 256 VPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGI--IPGAFCWKLEHHH 325 (328)
T ss_dssp CCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEEE--SEEEEEEECCCCC
T ss_pred eeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEecc--CcceEEEeccccc
Confidence 2 222 257899999999999999999532111122334566788888887644 4777776666665
No 47
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=4.7e-09 Score=101.17 Aligned_cols=248 Identities=12% Similarity=0.093 Sum_probs=158.6
Q ss_pred CCcceEEEeCCCCEEEEEEcC--C-CCeEEEEeCCCCCeEEE------EeCCCCCceeEEEeCCCCeEEEEeCC-----C
Q psy950 33 SANTTSPFSPLPRLLYWIDYG--Q-YPRIGKSYLDGSKWTSI------VSNGISMPRDLTIDMQTHDVYWVDAK-----L 98 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~--~-~~~I~r~~~dG~~~~~l------~~~~~~~P~glaiD~~~~~lYw~d~~-----~ 98 (407)
..|.+|+++|. |++|.+... . ..+|...+ +|.-. .+ ....+..|.++++|+. ++|||+|.. .
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSC
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCC
Confidence 67999999987 789999632 1 14788877 65311 00 0123568999999996 789999987 5
Q ss_pred CeEEEEecCCCe-EEEEc-c-----CCCCceEEEEe--CCEEEEEeC---CCCeEEEEecCCCCCCcccEEcccCCCCce
Q psy950 99 DLIQKISYNGGN-RQIIR-R-----NLPNPMGIAVH--KSDVYWVDR---NLRTVYKASKLASTNITLPTPIRTGLSGLR 166 (407)
Q Consensus 99 ~~I~~~~~dG~~-~~~~~-~-----~~~~P~~lav~--~~~lYwtd~---~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~ 166 (407)
.+|.+++++... .+.+. . ....|.+|+++ ++.+|.+|. ..+.|.+.+..+ +. ...++..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~-g~--~~r~~~~------ 163 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT-GL--AARVLQG------ 163 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT-CC--EEEECTT------
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC-CC--EEEEecC------
Confidence 899999987444 34332 1 12467999998 479999998 677888888764 21 1111110
Q ss_pred eeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccc---cCCCCcccccceeeeeecccceE
Q psy950 167 DIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPS---ASDPKKCTTMDEYLVFSTRTEIR 243 (407)
Q Consensus 167 ~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l---~~d~~~C~~~~~~Ll~s~~~~I~ 243 (407)
|+...| .+. .+.. .|..+ .++++ +.
T Consensus 164 -----~~~~~~----~~~------------------------~~~~---~g~~~~~~~~~g~----------------~~ 191 (343)
T 2qe8_A 164 -----YPGIAP----EDI------------------------DLVI---DGVPVQIGQPDGT----------------VI 191 (343)
T ss_dssp -----CTTTSC----CSC------------------------CCEE---TTEECBEECTTSC----------------EE
T ss_pred -----CCcccc----ccc------------------------ceeE---CCEEEEeccCCCc----------------ee
Confidence 000000 000 0000 00000 01110 00
Q ss_pred EeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCC----CC--ccc-----c---cCCCCccEE
Q psy950 244 ALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT----NP--SSA-----S---SNLTNVVGV 309 (407)
Q Consensus 244 ~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~----~~--~~~-----~---~~~~~~~gl 309 (407)
+. ...+.+|++++.++.||+++... .++++++.+ +. ... . ..+ .|.||
T Consensus 192 --------------~~--~~~~~gia~s~dg~~ly~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g-~pdgi 253 (343)
T 2qe8_A 192 --------------RP--HLGVNGIVLDAENEWLYLSPMHS-TSMYRIKSADLSNLQLTDAELGSKIERYSEKP-ICDGI 253 (343)
T ss_dssp --------------CC--CCCEEEEEECTTSCEEEEEESSC-SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC-SCSCE
T ss_pred --------------ce--ecccceeEeccCCCEEEEEeCCC-CeEEEEEHHHhcCCCCChhhhhcceEecccCC-CCceE
Confidence 00 01245788999899999999888 789998742 11 000 0 233 78999
Q ss_pred EEeccCCeEEEEeCCCCCeEEEEEC-CCCcc-ccc--CCCceeEEEEcCCCCeEEEEeCCC
Q psy950 310 EFDYADDKILFTQIRPWAKIAWIPT-TNPSS-ASS--NLTNVVGVEFDYADDKILFTQIRP 366 (407)
Q Consensus 310 AvDwi~~~LYwtd~~~~~~I~v~~~-~~~~r-l~~--~l~~P~~iavdp~~g~lywtd~~~ 366 (407)
|+|.- ++||.++... ++|.+++. +|... +.. .+..|.++++++. |.||.++...
T Consensus 254 a~d~~-G~l~va~~~~-~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~ 311 (343)
T 2qe8_A 254 SIDKD-HNIYVGDLAH-SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQL 311 (343)
T ss_dssp EECTT-CCEEEEEGGG-TEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEECCG
T ss_pred EECCC-CCEEEEccCC-CeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeCcc
Confidence 99985 7999999999 89999998 66533 332 3789999999985 8999998643
No 48
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.27 E-value=3.2e-09 Score=98.78 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=92.4
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
+..|.+|++++..|.||.++......|.+.+.+|.....+.......|.+|++|+. ++||+++...+.|...+.+|...
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~ 154 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNK-GRIIVVECKVMRVIIFDQNGNVL 154 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEE
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCC-CCEEEEECCCCEEEEEcCCCCEE
Confidence 45799999987889999999742248999998887655554344568999999995 57999999999999999998776
Q ss_pred EEEc--cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 112 QIIR--RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 112 ~~~~--~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
..+. ..+..|.+|++++ +.+|+++...+.|.+.+..
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 6554 4567899999987 7899999887788777654
No 49
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.27 E-value=6.6e-09 Score=97.91 Aligned_cols=238 Identities=6% Similarity=0.005 Sum_probs=155.6
Q ss_pred eEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEE
Q psy950 25 KKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104 (407)
Q Consensus 25 ~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~ 104 (407)
+.++.....-+.|.+.||..+.|||+|.... +|.+.+.++...+.+.. -..|.+|++|+.++ ||++. .+.|...
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~-~i~~~d~~~~~~~~~~~--~~~~~~i~~~~dG~-l~v~~--~~~l~~~ 78 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAK-KVCRWDSFTKQVQRVTM--DAPVSSVALRQSGG-YVATI--GTKFCAL 78 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEEEC--SSCEEEEEEBTTSS-EEEEE--TTEEEEE
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCC-EEEEEECCCCcEEEEeC--CCceEEEEECCCCC-EEEEE--CCeEEEE
Confidence 3456667778999999999999999999865 99999999776544332 24799999998655 77776 4689999
Q ss_pred ecCCCeEEEEcc-----CCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCC
Q psy950 105 SYNGGNRQIIRR-----NLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPP 178 (407)
Q Consensus 105 ~~dG~~~~~~~~-----~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~ 178 (407)
+.++...+.+.. ....|.+++++. +.+|+++...... . . ... ...-.+|
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~----------~-~~~-~~~~~l~------- 133 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------P----------A-VLE-RHQGALY------- 133 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------T----------T-BCC-TTCEEEE-------
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------c----------c-ccc-CCCcEEE-------
Confidence 998666554431 234577888876 6777765322100 0 0 000 0000000
Q ss_pred CCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEe
Q psy950 179 DENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKT 258 (407)
Q Consensus 179 ~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~ 258 (407)
.+.++++ +..+
T Consensus 134 ----------------------------------------~~d~~g~----------------~~~~------------- 144 (297)
T 3g4e_A 134 ----------------------------------------SLFPDHH----------------VKKY------------- 144 (297)
T ss_dssp ----------------------------------------EECTTSC----------------EEEE-------------
T ss_pred ----------------------------------------EEECCCC----------------EEEE-------------
Confidence 0111110 0000
Q ss_pred ecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCC--CCcc---c--cc---CCCCccEEEEeccCCeEEEEeCCCCCe
Q psy950 259 VSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT--NPSS---A--SS---NLTNVVGVEFDYADDKILFTQIRPWAK 328 (407)
Q Consensus 259 ~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~--~~~~---~--~~---~~~~~~glAvDwi~~~LYwtd~~~~~~ 328 (407)
......+.++.+++.++.|||++... ++|.+.+++ .... . .. ....|.||++|.-+ +||.++... ++
T Consensus 145 ~~~~~~pngi~~spdg~~lyv~~~~~-~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~-~~ 221 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDHKIFYYIDSLS-YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNG-GR 221 (297)
T ss_dssp EEEESBEEEEEECTTSCEEEEEEGGG-TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETT-TE
T ss_pred eeccccccceEEcCCCCEEEEecCCC-CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCC-CE
Confidence 01122345788888899999999887 788888764 1111 1 11 11279999999875 899999887 78
Q ss_pred EEEEECC-CCcc--cccCCCceeEEEEc-CCCCeEEEEeCC
Q psy950 329 IAWIPTT-NPSS--ASSNLTNVVGVEFD-YADDKILFTQIR 365 (407)
Q Consensus 329 I~v~~~~-~~~r--l~~~l~~P~~iavd-p~~g~lywtd~~ 365 (407)
|.+++.+ |... +.....+|.++++. |..+.||.|...
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 9999987 4422 33345789999998 888899999853
No 50
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.20 E-value=3.5e-08 Score=92.34 Aligned_cols=241 Identities=11% Similarity=0.061 Sum_probs=148.7
Q ss_pred cceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEE
Q psy950 23 KKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQ 102 (407)
Q Consensus 23 ~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~ 102 (407)
..-..+......|.++++||..+.|||++.... +|.+.+.++. .+.+. .....|.+|++|+ .++||+++...+.|.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~-~i~~~~~~~~-~~~~~-~~~~~~~~l~~~~-dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQN-RTWAWSDDGQ-LSPEM-HPSHHQNGHCLNK-QGHLIACSHGLRRLE 93 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGT-EEEEEETTSC-EEEEE-SSCSSEEEEEECT-TCCEEEEETTTTEEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCC-EEEEEECCCC-eEEEE-CCCCCcceeeECC-CCcEEEEecCCCeEE
Confidence 344556667888999999999888999998764 9999999987 54443 3456799999999 467999998889999
Q ss_pred EEec-CCCeEEEEc----cCCCCceEEEEeC-CEEEEEeCC-----------------CCeEEEEecCCCCCCcccEEcc
Q psy950 103 KISY-NGGNRQIIR----RNLPNPMGIAVHK-SDVYWVDRN-----------------LRTVYKASKLASTNITLPTPIR 159 (407)
Q Consensus 103 ~~~~-dG~~~~~~~----~~~~~P~~lav~~-~~lYwtd~~-----------------~~~I~~~~~~~~g~~~~~~~i~ 159 (407)
+.+. +|.-..... .....|.+++++. +.+|++|.. .+.|++++..+ ....+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g-----~~~~~~ 168 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG-----TLSAPI 168 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-----CEEEEE
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-----CEEEee
Confidence 9999 565443322 2345788999987 789998752 23566655432 112222
Q ss_pred cCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-
Q psy950 160 TGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST- 238 (407)
Q Consensus 160 ~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~- 238 (407)
..+..|.++.+ .+|++ .| ++.
T Consensus 169 ~~~~~~~gi~~--------------------------------------------------s~dg~-------~l-v~~~ 190 (296)
T 3e5z_A 169 RDRVKPNGLAF--------------------------------------------------LPSGN-------LL-VSDT 190 (296)
T ss_dssp CCCSSEEEEEE--------------------------------------------------CTTSC-------EE-EEET
T ss_pred cCCCCCccEEE--------------------------------------------------CCCCC-------EE-EEeC
Confidence 22222222222 12221 11 211
Q ss_pred -ccceEEeecCCC-CC-eeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc-cCCCCccEEEEe-c
Q psy950 239 -RTEIRALHLDPT-LT-AVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS-SNLTNVVGVEFD-Y 313 (407)
Q Consensus 239 -~~~I~~i~l~~~-~~-~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~-~~~~~~~glAvD-w 313 (407)
...|..+.+... .. ............+.++.+|..+ +||+++ . +.|.+++.+|..... .....|..++++ .
T Consensus 191 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~-~~v~~~~~~g~~~~~~~~~~~~~~~~f~~~ 266 (296)
T 3e5z_A 191 GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--G-DGVHVLTPDGDELGRVLTPQTTSNLCFGGP 266 (296)
T ss_dssp TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--T-TEEEEECTTSCEEEEEECSSCCCEEEEEST
T ss_pred CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--C-CeEEEECCCCCEEEEEECCCCceeEEEECC
Confidence 123444444311 11 0000000112335578888765 588888 5 679999888654332 222248899995 6
Q ss_pred cCCeEEEEeCCCCCeEEEEECCCC
Q psy950 314 ADDKILFTQIRPWAKIAWIPTTNP 337 (407)
Q Consensus 314 i~~~LYwtd~~~~~~I~v~~~~~~ 337 (407)
-.+.||.+... .|.++++...
T Consensus 267 d~~~L~v~t~~---~l~~~~~~~~ 287 (296)
T 3e5z_A 267 EGRTLYMTVST---EFWSIETNVR 287 (296)
T ss_dssp TSCEEEEEETT---EEEEEECSCC
T ss_pred CCCEEEEEcCC---eEEEEEcccc
Confidence 66788888753 5888776544
No 51
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.19 E-value=1.7e-08 Score=95.26 Aligned_cols=246 Identities=11% Similarity=0.122 Sum_probs=153.6
Q ss_pred CcceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeE
Q psy950 22 KKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLI 101 (407)
Q Consensus 22 ~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I 101 (407)
+..-..+..+...+.|.+.+|..++|||+|.... +|.+.+.+|. .+++.. ....|+++++|+. ++||+++...+.|
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~-~i~~~~~~g~-~~~~~~-~~~~~~gl~~d~d-G~l~v~~~~~~~v 109 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGR-RVLGWREDGT-VDVLLD-ATAFTNGNAVDAQ-QRLVHCEHGRRAI 109 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTT-EEEEEETTSC-EEEEEE-SCSCEEEEEECTT-SCEEEEETTTTEE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCC-EEEEEeCCCC-EEEEeC-CCCccceeeECCC-CCEEEEECCCCEE
Confidence 3344556677888999999999889999998764 9999998776 333333 4457999999995 5699999988999
Q ss_pred EEEecCCCeEEEEc----cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCC
Q psy950 102 QKISYNGGNRQIIR----RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQ 176 (407)
Q Consensus 102 ~~~~~dG~~~~~~~----~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~q 176 (407)
.+.+.+|....... .....|.+|+++. +.+|+||...+... +..+ . ..
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~--~~~~--~-----------------------~~ 162 (305)
T 3dr2_A 110 TRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK--PSQG--C-----------------------PA 162 (305)
T ss_dssp EEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC--GGGS--C-----------------------CC
T ss_pred EEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc--cccc--c-----------------------cc
Confidence 99999976443322 2346788999986 78999876422100 0000 0 00
Q ss_pred CCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeee
Q psy950 177 PPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPF 256 (407)
Q Consensus 177 p~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~ 256 (407)
. .. .+. ..+. .++++.. .+..+
T Consensus 163 ~-------~~--~~~-~~v~----------------------~~d~~~g---------------~~~~~----------- 184 (305)
T 3dr2_A 163 D-------PE--LAH-HSVY----------------------RLPPDGS---------------PLQRM----------- 184 (305)
T ss_dssp C-------CS--SSC-EEEE----------------------EECSSSC---------------CCEEE-----------
T ss_pred c-------cc--cCC-CeEE----------------------EEcCCCC---------------cEEEE-----------
Confidence 0 00 000 0000 0011000 00000
Q ss_pred EeecCCcceEEEEEEcCCCEEEEEEecC----CceEEEEeCCCCccc---c----cCCCCccEEEEeccCCeEEEEeCCC
Q psy950 257 KTVSNLTNVVGVEFDYADDKILFTQIRP----WAKIAWIPTTNPSSA---S----SNLTNVVGVEFDYADDKILFTQIRP 325 (407)
Q Consensus 257 ~~~~~~~~~~ald~d~~~~~lywsd~~~----~~~I~~~~~~~~~~~---~----~~~~~~~glAvDwi~~~LYwtd~~~ 325 (407)
. ....+.++++++.++.||+++... ...|.++++++.... . ..+ .|.||++|.-++ ||.+. .
T Consensus 185 --~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~pdgi~~d~~G~-lwv~~-~- 257 (305)
T 3dr2_A 185 --A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG-LPDGFCVDRGGW-LWSSS-G- 257 (305)
T ss_dssp --E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-CCCSEEECTTSC-EEECC-S-
T ss_pred --e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-CCCeEEECCCCC-EEEec-C-
Confidence 0 112345778888888899988751 146777776543211 1 234 789999998765 66665 3
Q ss_pred CCeEEEEECCCCcc-cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 326 WAKIAWIPTTNPSS-ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 326 ~~~I~v~~~~~~~r-l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
+.|.+++.+|... ....-..|.+++..|..+.||.+..
T Consensus 258 -~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 258 -TGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp -SEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred -CcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcC
Confidence 4699999877642 1221236999999987778888753
No 52
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.14 E-value=5.8e-09 Score=101.41 Aligned_cols=274 Identities=8% Similarity=0.010 Sum_probs=159.0
Q ss_pred ceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEE------eCCCCCceeEEEeCC---CCeEEEE
Q psy950 24 KKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIV------SNGISMPRDLTIDMQ---THDVYWV 94 (407)
Q Consensus 24 ~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~------~~~~~~P~glaiD~~---~~~lYw~ 94 (407)
+..++..++.+|++|+++|...+||+++.. .+|.+.+.||...+.+. ..+...|.||++++. +++||++
T Consensus 9 ~~~~va~~l~~P~~i~~~pdG~~l~V~e~~--G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 9 NVEVLQDKLDHPWALAFLPDNHGMLITLRG--GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEEEEEEESSEEEEEECSTTCCEEEEETT--TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred EEEEEECCCCCcEEEEEcCCCCEEEEEeCC--ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 334555679999999999974449999975 58999988875332221 123446899999997 8999999
Q ss_pred eCC-------CCeEEEEecCCC-----eEEEEcc-------CCCCceEEEEeC-CEEEEEeCC-------------CCeE
Q psy950 95 DAK-------LDLIQKISYNGG-----NRQIIRR-------NLPNPMGIAVHK-SDVYWVDRN-------------LRTV 141 (407)
Q Consensus 95 d~~-------~~~I~~~~~dG~-----~~~~~~~-------~~~~P~~lav~~-~~lYwtd~~-------------~~~I 141 (407)
+.. ..+|.+..+++. ..+++.. ....|.+|++.. ++||++... .++|
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 865 457999888753 3344432 123478999976 799999754 3489
Q ss_pred EEEecCCCC---C------CcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcc--cccccceecCCCCCCCCcce
Q psy950 142 YKASKLAST---N------ITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNG--GCEQLCFSYPVEFPQNKLHY 210 (407)
Q Consensus 142 ~~~~~~~~g---~------~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng--~Cs~lC~~~~~~~~~~~~~~ 210 (407)
.|++.+++- + ....+++..++..|.++++.... +.-.+.. ++ +-+.+-...++. .|
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~-----g~l~~~d--~g~~~~dei~~i~~G~------ny 233 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWS-----NALWLNE--HGPRGGDEINIPQKGK------NY 233 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTT-----TEEEEEE--ECSBSCEEEECCCTTC------BC
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCC-----CCEEEEe--cCCCCCcEEeEeccCC------cC
Confidence 999987510 0 01345666777788888865311 1111111 11 111222222221 11
Q ss_pred ---EEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEc------CCCEEEEEE
Q psy950 211 ---KCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDY------ADDKILFTQ 281 (407)
Q Consensus 211 ---~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~------~~~~lywsd 281 (407)
.|. .|.. .++..|.... .. .......|+........+.++.|.. ..+.+|+++
T Consensus 234 Gwp~~~--~~~~--~~~~~~~~~~-------~~-------~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~ 295 (353)
T 2g8s_A 234 GWPLAT--WGIN--YSGFKIPEAK-------GE-------IVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGA 295 (353)
T ss_dssp CTTTBC--SSBC--TTSSCCTTCC-------BS-------SCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEE
T ss_pred CCCCcc--CCCC--CCCCccCccc-------CC-------CCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEE
Confidence 010 0000 0011110000 00 0000111211111223466777753 247899999
Q ss_pred ecCCceEEEEeCCCCcccc------cCCCCccEEEEeccCCeEEEE-eCCCCCeEEEEE
Q psy950 282 IRPWAKIAWIPTTNPSSAS------SNLTNVVGVEFDYADDKILFT-QIRPWAKIAWIP 333 (407)
Q Consensus 282 ~~~~~~I~~~~~~~~~~~~------~~~~~~~glAvDwi~~~LYwt-d~~~~~~I~v~~ 333 (407)
... .+|.++.+++..... +....|.+|++++-+ .||.+ |... ++|.++.
T Consensus 296 ~~~-~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG-~lyv~td~~~-g~I~ri~ 351 (353)
T 2g8s_A 296 LKD-KDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG-YLYVLTDESS-GELLKVS 351 (353)
T ss_dssp TTT-TEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS-CEEEEECSTT-EEEEEEE
T ss_pred ccC-CEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC-cEEEEEeCCC-CEEEEEe
Confidence 988 899999887643221 322389999999875 59996 6566 7898875
No 53
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.14 E-value=7.6e-08 Score=90.87 Aligned_cols=262 Identities=11% Similarity=0.064 Sum_probs=165.2
Q ss_pred EEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-EEEccC
Q psy950 39 PFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QIIRRN 117 (407)
Q Consensus 39 avdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~~~~~ 117 (407)
.+++..+++|+++.... .|...+++.......+..+...| ++++++.++.||+++...+.|..++++.... ......
T Consensus 4 ~~~~~~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLR-RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGT-EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCC-eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 45677899999998764 99999988666655555556567 9999999999999999899999999976554 333344
Q ss_pred CCCceE-EEEeC--CEEEEEeCCCC--eEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccc
Q psy950 118 LPNPMG-IAVHK--SDVYWVDRNLR--TVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGC 192 (407)
Q Consensus 118 ~~~P~~-lav~~--~~lYwtd~~~~--~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~C 192 (407)
...|.. +++.. .+||......+ .|...+... + .....+.. -..|.++.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~-~--~~~~~~~~-~~~~~~~~----------------------- 134 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK-N--KFISTIPI-PYDAVGIA----------------------- 134 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT-T--EEEEEEEC-CTTEEEEE-----------------------
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCC-C--CeEEEEEC-CCCccceE-----------------------
Confidence 567777 88875 57884333333 677777654 1 11111100 00111111
Q ss_pred cccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecc--cc-eEEeecCCCCCe--eeeEeecCCcceEE
Q psy950 193 EQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR--TE-IRALHLDPTLTA--VPFKTVSNLTNVVG 267 (407)
Q Consensus 193 s~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~--~~-I~~i~l~~~~~~--~~~~~~~~~~~~~a 267 (407)
+.+|++ +|+++.. .. +....++..... .....+.....+.+
T Consensus 135 ---------------------------~spdg~-------~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 180 (331)
T 3u4y_A 135 ---------------------------ISPNGN-------GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFN 180 (331)
T ss_dssp ---------------------------ECTTSS-------CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEE
T ss_pred ---------------------------ECCCCC-------EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccc
Confidence 112221 1222211 22 333333321110 00112233455788
Q ss_pred EEEEcCCCEEEEEEecCCceEEEEeCCCCcc---cc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--c
Q psy950 268 VEFDYADDKILFTQIRPWAKIAWIPTTNPSS---AS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--A 340 (407)
Q Consensus 268 ld~d~~~~~lywsd~~~~~~I~~~~~~~~~~---~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l 340 (407)
+.+++.++++|+++... +.|..+++.+... .. ..+..|.+|++++.++.||.++... +.|.++++.+... +
T Consensus 181 ~~~spdg~~l~v~~~~~-~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 181 ITFTPDGNFAFVANLIG-NSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTEST-VDVFNFNQLSGTLSFV 258 (331)
T ss_dssp EEECTTSSEEEEEETTT-TEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSE-EEEEEEETTTTEEEEE
T ss_pred eEECCCCCEEEEEeCCC-CeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCC-CEEEEEECCCCceeee
Confidence 99999999999999887 8899999876554 22 3334899999999999999999887 7899999876532 1
Q ss_pred ---ccC-------CCceeEEEEcCCCCeEEEEeCC
Q psy950 341 ---SSN-------LTNVVGVEFDYADDKILFTQIR 365 (407)
Q Consensus 341 ---~~~-------l~~P~~iavdp~~g~lywtd~~ 365 (407)
... .....++++.|...+||.+...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 259 KSFGHGLLIDPRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp EEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT
T ss_pred cccccccccCCCCcccccceEECCCCCEEEEecCC
Confidence 111 1112458999999999988753
No 54
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.13 E-value=2.2e-07 Score=87.69 Aligned_cols=253 Identities=7% Similarity=-0.066 Sum_probs=157.7
Q ss_pred eEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCe-EEEEeCCCCCcee-EEEeCCCCeEEEEeCCCC--e
Q psy950 25 KKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKW-TSIVSNGISMPRD-LTIDMQTHDVYWVDAKLD--L 100 (407)
Q Consensus 25 ~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~-~~l~~~~~~~P~g-laiD~~~~~lYw~d~~~~--~ 100 (407)
...+..+...| +++++|..++||.++.+.. +|.+.+++.... ...+.. ...|.. +++++.++.||..+...+ .
T Consensus 33 ~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 109 (331)
T 3u4y_A 33 LNQITLGYDFV-DTAITSDCSNVVVTSDFCQ-TLVQIETQLEPPKVVAIQE-GQSSMADVDITPDDQFAVTVTGLNHPFN 109 (331)
T ss_dssp EEEEECCCCEE-EEEECSSSCEEEEEESTTC-EEEEEECSSSSCEEEEEEE-CSSCCCCEEECTTSSEEEECCCSSSSCE
T ss_pred eeeEEccCCcc-eEEEcCCCCEEEEEeCCCC-eEEEEECCCCceeEEeccc-CCCCccceEECCCCCEEEEecCCCCccc
Confidence 33444456667 9999999999999998764 999999976654 333332 346878 999999999994444334 8
Q ss_pred EEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCCe-EEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCC
Q psy950 101 IQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRT-VYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQP 177 (407)
Q Consensus 101 I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~-I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp 177 (407)
|...+++.............|.++++.+ .+||.++...+. |...+....+. +.. .. .... +
T Consensus 110 i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~-----~~~-----~~-~~~~-----~ 173 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV-----LFD-----TG-QEFI-----S 173 (331)
T ss_dssp EEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC-----EEE-----EE-EEEE-----C
T ss_pred EEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCc-----Eee-----cC-Cccc-----c
Confidence 9999998666543344566889999977 379999887666 66555543111 000 00 0000 0
Q ss_pred CCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeee
Q psy950 178 PDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVP 255 (407)
Q Consensus 178 ~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~ 255 (407)
. +. +-.+++ +.+|++ +|+++. ...|..+.+.......+
T Consensus 174 ~-~~---------~~~~~~-----------------------~spdg~-------~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 174 G-GT---------RPFNIT-----------------------FTPDGN-------FAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp S-SS---------SEEEEE-----------------------ECTTSS-------EEEEEETTTTEEEEEECSSTTSCEE
T ss_pred C-CC---------CccceE-----------------------ECCCCC-------EEEEEeCCCCeEEEEECCCCcccce
Confidence 0 00 000111 123332 122222 23455455443322111
Q ss_pred eEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCccc------cc--CC----CCccEEEEeccCCeEEEEeC
Q psy950 256 FKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSA------SS--NL----TNVVGVEFDYADDKILFTQI 323 (407)
Q Consensus 256 ~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~------~~--~~----~~~~glAvDwi~~~LYwtd~ 323 (407)
+..+.....+.++.+++.+++||++.... +.|..+++.+.... .. +. ..+.++++.+.++.||.++.
T Consensus 214 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 214 LNAVGTNNLPGTIVVSRDGSTVYVLTEST-VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEEECSSE-EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred eeeccCCCCCceEEECCCCCEEEEEEcCC-CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecC
Confidence 22233345567889999999999998776 77888888765441 01 11 02345899999999999999
Q ss_pred CCCCeEEEEECCCCc
Q psy950 324 RPWAKIAWIPTTNPS 338 (407)
Q Consensus 324 ~~~~~I~v~~~~~~~ 338 (407)
.. +.|.+.++.+..
T Consensus 293 ~~-~~v~v~d~~~~~ 306 (331)
T 3u4y_A 293 IS-RELKVFTISGKV 306 (331)
T ss_dssp TT-TEEEEEETTSCE
T ss_pred CC-CcEEEEEecCCc
Confidence 88 899999988764
No 55
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.08 E-value=1e-07 Score=89.28 Aligned_cols=245 Identities=12% Similarity=0.132 Sum_probs=146.7
Q ss_pred EEcCCCCCcceEEEeCCCCEEEEE-------EcCCCCeEEEEeCCCCCeEEEEeC----CCCCceeEEEeCCCCeEEEEe
Q psy950 27 LKTSFRSANTTSPFSPLPRLLYWI-------DYGQYPRIGKSYLDGSKWTSIVSN----GISMPRDLTIDMQTHDVYWVD 95 (407)
Q Consensus 27 l~~~~~~~P~~iavdp~~g~lywt-------d~~~~~~I~r~~~dG~~~~~l~~~----~~~~P~glaiD~~~~~lYw~d 95 (407)
.+..++..|.++++|+ .|.|||+ +... ..|.+.+.+....+.+... ....|.+|++|+.+++||+++
T Consensus 12 ~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPA-GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp EEECCCTTCEEEEECT-TSCEEEEETTCEETTEEC-CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE
T ss_pred hhhccCCCccCceECC-CCCEEEEEeccccCCCCC-CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE
Confidence 4567888999999995 5789999 5544 3899998754444443320 124799999999768999999
Q ss_pred CCCCeEEEEecCCCeEEEE-c-----cCCCCceEEEEeC-CEEEEEeCCC---------------CeEEEEecCCCCCCc
Q psy950 96 AKLDLIQKISYNGGNRQII-R-----RNLPNPMGIAVHK-SDVYWVDRNL---------------RTVYKASKLASTNIT 153 (407)
Q Consensus 96 ~~~~~I~~~~~dG~~~~~~-~-----~~~~~P~~lav~~-~~lYwtd~~~---------------~~I~~~~~~~~g~~~ 153 (407)
... .|.+++.+|. .+.+ . .....|.+|+++. +.+|+++... +.|++.+..+ .
T Consensus 90 ~~~-~l~~~d~~g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g--~-- 163 (314)
T 1pjx_A 90 MRL-GLLVVQTDGT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG--Q-- 163 (314)
T ss_dssp TTT-EEEEEETTSC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS--C--
T ss_pred CCC-CEEEEeCCCC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCC--C--
Confidence 744 8999999854 3333 2 1235689999986 7899998754 3555555332 1
Q ss_pred ccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccccee
Q psy950 154 LPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEY 233 (407)
Q Consensus 154 ~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~ 233 (407)
...+......|.++.+... ..+|+ ..
T Consensus 164 -~~~~~~~~~~~~~i~~~~~----------------------------------------------~d~dg-------~~ 189 (314)
T 1pjx_A 164 -MIQVDTAFQFPNGIAVRHM----------------------------------------------NDGRP-------YQ 189 (314)
T ss_dssp -EEEEEEEESSEEEEEEEEC----------------------------------------------TTSCE-------EE
T ss_pred -EEEeccCCCCcceEEEecc----------------------------------------------cCCCC-------CE
Confidence 1111111112222221100 00111 01
Q ss_pred eeeec--ccceEEeecCCCC-Ce--eeeEeecCC--cceEEEEEEcCCCEEEEEEecCCceEEEEeCC-CCcccc-cC-C
Q psy950 234 LVFST--RTEIRALHLDPTL-TA--VPFKTVSNL--TNVVGVEFDYADDKILFTQIRPWAKIAWIPTT-NPSSAS-SN-L 303 (407)
Q Consensus 234 Ll~s~--~~~I~~i~l~~~~-~~--~~~~~~~~~--~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~-~~~~~~-~~-~ 303 (407)
|+++. ...|..+.+.... .. ..+..+... ..+.++.+|.. +.||+++... +.|.+++.+ +..... .. .
T Consensus 190 l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~l~v~~~~~-~~i~~~d~~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 190 LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED-NNLLVANWGS-SHIEVFGPDGGQPKMRIRCPF 267 (314)
T ss_dssp EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT-CCEEEEEETT-TEEEEECTTCBSCSEEEECSS
T ss_pred EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC-CCEEEEEcCC-CEEEEEcCCCCcEeEEEeCCC
Confidence 22221 1234444332110 00 011111111 45778888864 5789998877 789999887 332221 22 1
Q ss_pred CCccEEEEeccCCeEEEEeCCCCCeEEEEECCC
Q psy950 304 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 304 ~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
..|.+++++.-++.||.++... +.|.+++++.
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~-~~l~~~~~~~ 299 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN-NAVWKFEWQR 299 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-TEEEEEECSS
T ss_pred CCceeEEECCCCCEEEEEeCCC-CeEEEEeCCC
Confidence 3899999998888899999887 7899998764
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.07 E-value=2.3e-07 Score=88.50 Aligned_cols=248 Identities=12% Similarity=0.113 Sum_probs=147.5
Q ss_pred cCCCCCcceEEEeCCCCEEEEEEcC-CCCeEEEEeCCCCCeEEEEe--CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEe
Q psy950 29 TSFRSANTTSPFSPLPRLLYWIDYG-QYPRIGKSYLDGSKWTSIVS--NGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105 (407)
Q Consensus 29 ~~~~~~P~~iavdp~~g~lywtd~~-~~~~I~r~~~dG~~~~~l~~--~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~ 105 (407)
......|.+++++|. |+||.++.. ....|...++++...+.+.. .....|.+|++++.++.||.++...+.|...+
T Consensus 36 ~~~~~~p~~~a~spd-g~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAK-DCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTT-CEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccC-CeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 334678999999997 459999863 33488888887655433332 23458999999999999999998888888888
Q ss_pred cC--CCeEEE--Ecc---------CCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEe
Q psy950 106 YN--GGNRQI--IRR---------NLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIF 171 (407)
Q Consensus 106 ~d--G~~~~~--~~~---------~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~ 171 (407)
++ |....+ +.. ...+|.++++.. +.+|.++...+.|...+....+. ...+. .+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~---~~~~~----------~~ 181 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ---LSEQS----------VL 181 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC---EEEEE----------EE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc---EEEee----------eE
Confidence 75 332222 111 123577899876 55999998888777766552121 11110 00
Q ss_pred eecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCC
Q psy950 172 DIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDP 249 (407)
Q Consensus 172 ~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~ 249 (407)
..+. +. +-.++++ .+|++ +|+++. ...+..+.++.
T Consensus 182 ---~~~~-g~---------~p~~~~~-----------------------spdg~-------~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 182 ---TMEA-GF---------GPRHLVF-----------------------SPDGQ-------YAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp ---ECCT-TC---------CEEEEEE-----------------------CTTSS-------EEEEEETTTTEEEEEEEET
T ss_pred ---EcCC-CC---------CCceEEE-----------------------CCCCC-------EEEEEeCCCCEEEEEEecC
Confidence 0000 00 0011111 22221 111111 11222222221
Q ss_pred CCCe-eeeEeec-------CCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc--cc-c---cCCCCccEEEEeccC
Q psy950 250 TLTA-VPFKTVS-------NLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS--SA-S---SNLTNVVGVEFDYAD 315 (407)
Q Consensus 250 ~~~~-~~~~~~~-------~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~--~~-~---~~~~~~~glAvDwi~ 315 (407)
..-. .....+. ....+.++.+++.+++||+++... +.|...+++... .. . .-+..|.+|++++.+
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC
Confidence 1000 0000110 113477899999999999999877 778887775221 11 1 213379999999999
Q ss_pred CeEEEEeCCCCCeEEEEECC
Q psy950 316 DKILFTQIRPWAKIAWIPTT 335 (407)
Q Consensus 316 ~~LYwtd~~~~~~I~v~~~~ 335 (407)
+.||.++... ++|.+..++
T Consensus 298 ~~l~v~~~~~-~~v~v~~~d 316 (347)
T 3hfq_A 298 AFVVVVNQNT-DNATLYARD 316 (347)
T ss_dssp SEEEEEETTT-TEEEEEEEC
T ss_pred CEEEEEEcCC-CcEEEEEEe
Confidence 9999999987 788888554
No 57
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.06 E-value=6e-07 Score=85.12 Aligned_cols=229 Identities=9% Similarity=0.067 Sum_probs=144.1
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCC-C--------CceeEEEeCCCCeEEEEeC-CCCeEE
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGI-S--------MPRDLTIDMQTHDVYWVDA-KLDLIQ 102 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~-~--------~P~glaiD~~~~~lYw~d~-~~~~I~ 102 (407)
..|.+++++|..+++|+++.... .|...+.+.......+...- . .|.++++++.+++||+++. ..+.|.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNS-AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCC-EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 45999999999999999998764 89999987555433343221 1 2889999999999999994 567899
Q ss_pred EEecCCCeEEEEcc-CCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCC
Q psy950 103 KISYNGGNRQIIRR-NLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPD 179 (407)
Q Consensus 103 ~~~~dG~~~~~~~~-~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~ 179 (407)
.++........... ....|.++++.. ++||.++. .+.|...+..+ + .....+.. ..
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~-~--~~~~~~~~-------------~~---- 226 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTAD-N--KILSRKKL-------------LD---- 226 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTT-T--EEEEEEEC-------------CC----
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCC-C--eEEEEEEc-------------CC----
Confidence 99997665533333 456689999865 67888876 56777777654 2 11111110 00
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeE
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFK 257 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~ 257 (407)
..+ .+....+++ .+|++ +++++. ...|..+.+...... ...
T Consensus 227 -~~~-----~~~~~~~~~-----------------------s~dg~-------~l~~~~~~~~~v~~~d~~~~~~~-~~~ 269 (353)
T 3vgz_A 227 -DGK-----EHFFINISL-----------------------DTARQ-------RAFITDSKAAEVLVVDTRNGNIL-AKV 269 (353)
T ss_dssp -SSS-----CCCEEEEEE-----------------------ETTTT-------EEEEEESSSSEEEEEETTTCCEE-EEE
T ss_pred -CCC-----CcccceEEE-----------------------CCCCC-------EEEEEeCCCCEEEEEECCCCcEE-EEE
Confidence 000 000001111 22221 122221 123444444332211 111
Q ss_pred eecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCC
Q psy950 258 TVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIR 324 (407)
Q Consensus 258 ~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~ 324 (407)
++ ..+.++.|++.++++|+++... +.|..++..+..... ..+..|.++++++.++.||.+...
T Consensus 270 ~~---~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 270 AA---PESLAVLFNPARNEAYVTHRQA-GKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EC---SSCCCEEEETTTTEEEEEETTT-TEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred Ec---CCCceEEECCCCCEEEEEECCC-CeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 11 2235688999999999999887 889999987665443 344489999999999999999876
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.05 E-value=2.2e-07 Score=88.06 Aligned_cols=226 Identities=12% Similarity=0.070 Sum_probs=145.3
Q ss_pred EcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCC----CeEEE
Q psy950 28 KTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKL----DLIQK 103 (407)
Q Consensus 28 ~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~----~~I~~ 103 (407)
+......|.++++|+. |.|||++.... .|.+.+.++...+.+.......|.+|++|+. ++||+++... +.|.+
T Consensus 40 ~~~~~~~~~~~~~~~~-g~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQ-GQLFLLDVFEG-NIFKINPETKEIKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEECTT-SCEEEEETTTC-EEEEECTTTCCEEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEE
T ss_pred EeccCccccCcEECCC-CCEEEEECCCC-EEEEEeCCCCcEEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEE
Confidence 3445667999999976 67999987654 8999999877666555333457999999985 5789988766 68999
Q ss_pred EecCCCeEE-EEc--cCCCCceEEEEeC-CEEEEEeCCC------CeEEEEecCCCCCCcccEEcccCCCCceeeEEeee
Q psy950 104 ISYNGGNRQ-IIR--RNLPNPMGIAVHK-SDVYWVDRNL------RTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDI 173 (407)
Q Consensus 104 ~~~dG~~~~-~~~--~~~~~P~~lav~~-~~lYwtd~~~------~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~ 173 (407)
++.++...+ .+. .....|.+++++. +.+|+++... +.|++++..+
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~------------------------- 171 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF------------------------- 171 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-------------------------
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC-------------------------
Confidence 999887665 332 2345688888876 6777776531 1222222111
Q ss_pred cCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCe
Q psy950 174 VNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTA 253 (407)
Q Consensus 174 ~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~ 253 (407)
.. +..+.
T Consensus 172 ---------------------------------------------------~~---------------~~~~~------- 178 (333)
T 2dg1_A 172 ---------------------------------------------------RT---------------VTPII------- 178 (333)
T ss_dssp ---------------------------------------------------CC---------------EEEEE-------
T ss_pred ---------------------------------------------------CE---------------EEEee-------
Confidence 00 00000
Q ss_pred eeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCC--CCccc-------c---cCCCCccEEEEeccCCeEEEE
Q psy950 254 VPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT--NPSSA-------S---SNLTNVVGVEFDYADDKILFT 321 (407)
Q Consensus 254 ~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~--~~~~~-------~---~~~~~~~glAvDwi~~~LYwt 321 (407)
.....+.++.+++.++.||+++... +.|++++.+ +.... . +.. .|.+|++|.- ++||.+
T Consensus 179 ------~~~~~~~~i~~~~dg~~l~v~~~~~-~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~-~~~~i~~d~~-G~l~v~ 249 (333)
T 2dg1_A 179 ------QNISVANGIALSTDEKVLWVTETTA-NRLHRIALEDDGVTIQPFGATIPYYFTGHE-GPDSCCIDSD-DNLYVA 249 (333)
T ss_dssp ------EEESSEEEEEECTTSSEEEEEEGGG-TEEEEEEECTTSSSEEEEEEEEEEECCSSS-EEEEEEEBTT-CCEEEE
T ss_pred ------cCCCcccceEECCCCCEEEEEeCCC-CeEEEEEecCCCcCcccccceEEEecCCCC-CCCceEECCC-CCEEEE
Confidence 0011234566666666777777655 567666663 22110 0 112 7889999986 568888
Q ss_pred eCCCCCeEEEEECCCCcc--cccC------CCceeEEEEcCCCCeEEEEeC
Q psy950 322 QIRPWAKIAWIPTTNPSS--ASSN------LTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 322 d~~~~~~I~v~~~~~~~r--l~~~------l~~P~~iavdp~~g~lywtd~ 364 (407)
+... +.|.+++.++... +... +..|.+++++|..+.||.+.-
T Consensus 250 ~~~~-~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 250 MYGQ-GRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EETT-TEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred EcCC-CEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 8777 7899998866532 2211 127999999987778988864
No 59
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.04 E-value=8.8e-07 Score=83.33 Aligned_cols=272 Identities=8% Similarity=0.026 Sum_probs=160.4
Q ss_pred CCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCC--CCCeEEEEe-CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEec
Q psy950 30 SFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLD--GSKWTSIVS-NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106 (407)
Q Consensus 30 ~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~d--G~~~~~l~~-~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~ 106 (407)
.....|.+++++|...+||+++... ..|...+++ +...+.+.. .....|.++++++.++.||++....+.|...++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 3456799999999999999998864 378887776 434333221 122389999999999999999988888888888
Q ss_pred -CCCeEEEE--ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCC
Q psy950 107 -NGGNRQII--RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDEN 181 (407)
Q Consensus 107 -dG~~~~~~--~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~ 181 (407)
+|...+.+ ......|.++++.. .+||.++...+.|...+....+. ...+.. . .. ..+. +
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~-------~-~~---~~~~-~- 177 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH---LVAQDP-------A-EV---TTVE-G- 177 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC---EEEEEE-------E-EE---ECST-T-
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc---eeeecc-------c-cc---ccCC-C-
Confidence 34333222 24556789999876 57999886667777666543011 110000 0 00 0000 0
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCC--CCe--ee
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPT--LTA--VP 255 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~--~~~--~~ 255 (407)
....++++ .+|++ +|+++. ...|..+.++.. ... ..
T Consensus 178 --------~~~~~~~~-----------------------~pdg~-------~l~~~~~~~~~i~~~~~~~~~g~~~~~~~ 219 (343)
T 1ri6_A 178 --------AGPRHMVF-----------------------HPNEQ-------YAYCVNELNSSVDVWELKDPHGNIECVQT 219 (343)
T ss_dssp --------CCEEEEEE-----------------------CTTSS-------EEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred --------CCcceEEE-----------------------CCCCC-------EEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence 00011111 11211 111111 122333333221 110 00
Q ss_pred eEee----cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCC--CCccc--c--cCCCCccEEEEeccCCeEEEEeCCC
Q psy950 256 FKTV----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT--NPSSA--S--SNLTNVVGVEFDYADDKILFTQIRP 325 (407)
Q Consensus 256 ~~~~----~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~--~~~~~--~--~~~~~~~glAvDwi~~~LYwtd~~~ 325 (407)
+..+ .....+.++.+++.++.||++.... +.|...+++ +.... . .....|.++++++-++.||.++...
T Consensus 220 ~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 298 (343)
T 1ri6_A 220 LDMMPENFSDTRWAADIHITPDGRHLYACDRTA-SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS 298 (343)
T ss_dssp EECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT
T ss_pred ccccCccccccCCccceEECCCCCEEEEEecCC-CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC
Confidence 0001 1123566899999999999998777 778887776 32211 1 2223699999999999999999877
Q ss_pred CCeEEEEECC--CCc--ccc--cCCCceeEEEEcCCCCe
Q psy950 326 WAKIAWIPTT--NPS--SAS--SNLTNVVGVEFDYADDK 358 (407)
Q Consensus 326 ~~~I~v~~~~--~~~--rl~--~~l~~P~~iavdp~~g~ 358 (407)
+.|.+.+++ +.. ++. .....|.+|+++|....
T Consensus 299 -~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 299 -HHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp -CEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred -CeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 788887554 332 222 23378999999987543
No 60
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.03 E-value=2.6e-07 Score=86.27 Aligned_cols=249 Identities=10% Similarity=0.076 Sum_probs=145.8
Q ss_pred CCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEccCCCCceEEEEeC-CEEEEEeCCCCeEE
Q psy950 64 DGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVY 142 (407)
Q Consensus 64 dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~ 142 (407)
.+...+.+. .....|+|++.|+.++.|||++...+.|.+.+.++. .+.+......|.+|++.. +.||+++...+.|.
T Consensus 16 ~~~~~~~l~-~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 16 AGAEARRLA-DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TTCCCEEEE-CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCCcEEEEe-cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 344444444 467799999999988889999999999999999988 655555667899999986 78999998888899
Q ss_pred EEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccC
Q psy950 143 KASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS 222 (407)
Q Consensus 143 ~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~ 222 (407)
+.+..+ +. .+.+..... ..+ ...| ..+++...+ .-+.+.-..|..-..
T Consensus 94 ~~d~~~-g~---~~~~~~~~~-----------~~~--~~~~---------~~i~~d~~G------~l~vtd~~~g~~~~~ 141 (296)
T 3e5z_A 94 RQREPG-GE---WESIADSFE-----------GKK--LNSP---------NDVCLAPDG------SLWFSDPTYGIDKPE 141 (296)
T ss_dssp EECSTT-CC---EEEEECEET-----------TEE--CCCC---------CCEEECTTS------CEEEEECSHHHHCGG
T ss_pred EEcCCC-Cc---EEEEeeccC-----------CCC--CCCC---------CCEEECCCC------CEEEECCcccccccc
Confidence 988754 22 222210000 000 0000 011110000 001100000000000
Q ss_pred CCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCccc---
Q psy950 223 DPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSA--- 299 (407)
Q Consensus 223 d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~--- 299 (407)
.+..... + .....|..+... .. ..........+.++++++.++.+ |++... ++|.+.+++.....
T Consensus 142 ~~~~~~~-~-----~~~~~l~~~~~~-g~---~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~-~~i~~~~~~~~g~~~~~ 209 (296)
T 3e5z_A 142 EGYGGEM-E-----LPGRWVFRLAPD-GT---LSAPIRDRVKPNGLAFLPSGNLL-VSDTGD-NATHRYCLNARGETEYQ 209 (296)
T ss_dssp GSSCCCC-C-----SSSCEEEEECTT-SC---EEEEECCCSSEEEEEECTTSCEE-EEETTT-TEEEEEEECSSSCEEEE
T ss_pred ccccccc-c-----CCCcEEEEECCC-CC---EEEeecCCCCCccEEECCCCCEE-EEeCCC-CeEEEEEECCCCcCcCC
Confidence 0000000 0 001234444332 11 11123345567889999988888 999887 78988887521111
Q ss_pred ----c-cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--cccCCCceeEEEEc-CCCCeEEEEeC
Q psy950 300 ----S-SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--ASSNLTNVVGVEFD-YADDKILFTQI 364 (407)
Q Consensus 300 ----~-~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l~~~l~~P~~iavd-p~~g~lywtd~ 364 (407)
. ..+ .|.+|++|.-+ +||.+. . +.|.+++.+|... +..... |.+++.. |..+.||.+..
T Consensus 210 ~~~~~~~~~-~p~~i~~d~~G-~l~v~~--~-~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 210 GVHFTVEPG-KTDGLRVDAGG-LIWASA--G-DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp EEEECCSSS-CCCSEEEBTTS-CEEEEE--T-TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEET
T ss_pred CeEeeCCCC-CCCeEEECCCC-CEEEEc--C-CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC
Confidence 1 223 78999999865 688888 4 6899999886532 222333 9999995 66677888863
No 61
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.03 E-value=7.8e-07 Score=83.70 Aligned_cols=263 Identities=9% Similarity=0.007 Sum_probs=157.9
Q ss_pred CCCEEEEEEcCCCCeEEEEeCCCCC--eEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC--CCeEEEEc--c
Q psy950 43 LPRLLYWIDYGQYPRIGKSYLDGSK--WTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN--GGNRQIIR--R 116 (407)
Q Consensus 43 ~~g~lywtd~~~~~~I~r~~~dG~~--~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d--G~~~~~~~--~ 116 (407)
.++++|.++.... .|...+++.+. ...........|.++++++.++.||++....+.|...+++ +...+.+. .
T Consensus 3 ~~~~l~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 3 LKQTVYIASPESQ-QIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp CEEEEEEEEGGGT-EEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred ceEEEEEeCCCCC-eEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc
Confidence 4578898876543 88888887433 2221122345799999999999999999887888887776 44433222 2
Q ss_pred CCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccc
Q psy950 117 NLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQ 194 (407)
Q Consensus 117 ~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~ 194 (407)
....|.++++.. ..||.+....+.|...+... +. ....+. .... . ..+..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~-~~--~~~~~~----------~~~~------~---------~~~~~ 133 (343)
T 1ri6_A 82 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLED-GL--PVGVVD----------VVEG------L---------DGCHS 133 (343)
T ss_dssp CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEET-TE--EEEEEE----------EECC------C---------TTBCC
T ss_pred cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCC-Cc--cccccc----------cccC------C---------CCceE
Confidence 233899999976 57999988777676665532 11 111110 0000 0 00111
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCC-CCCeee---eEeecCCcceEEE
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDP-TLTAVP---FKTVSNLTNVVGV 268 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~-~~~~~~---~~~~~~~~~~~al 268 (407)
+++ .+|++ +++++. ...|..+.+.. ...... .........+.++
T Consensus 134 ~~~-----------------------s~dg~-------~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 134 ANI-----------------------SPDNR-------TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp CEE-----------------------CTTSS-------EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred EEE-----------------------CCCCC-------EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 111 12221 122221 23344444433 111110 1122233467789
Q ss_pred EEEcCCCEEEEEEecCCceEEEEeCCCC--ccc--c---cCC------CCccEEEEeccCCeEEEEeCCCCCeEEEEECC
Q psy950 269 EFDYADDKILFTQIRPWAKIAWIPTTNP--SSA--S---SNL------TNVVGVEFDYADDKILFTQIRPWAKIAWIPTT 335 (407)
Q Consensus 269 d~d~~~~~lywsd~~~~~~I~~~~~~~~--~~~--~---~~~------~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~ 335 (407)
.+++.++++|+++... +.|...+++.. ... . .+. ..+.++++++-++.||.++... +.|.+.+++
T Consensus 184 ~~~pdg~~l~~~~~~~-~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-~~i~v~d~~ 261 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELN-SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-SLITVFSVS 261 (343)
T ss_dssp EECTTSSEEEEEETTT-TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-TEEEEEEEC
T ss_pred EECCCCCEEEEEeCCC-CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-CEEEEEEEc
Confidence 9999999999998777 78888888541 111 0 111 1455799999999999999887 789999887
Q ss_pred --CCc-c-c--ccCCCceeEEEEcCCCCeEEEEeCCC
Q psy950 336 --NPS-S-A--SSNLTNVVGVEFDYADDKILFTQIRP 366 (407)
Q Consensus 336 --~~~-r-l--~~~l~~P~~iavdp~~g~lywtd~~~ 366 (407)
+.. . + ......|.+++++|...+||.+...+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 298 (343)
T 1ri6_A 262 EDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS 298 (343)
T ss_dssp TTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT
T ss_pred CCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC
Confidence 322 2 2 22234499999999988899987543
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.99 E-value=1e-06 Score=84.43 Aligned_cols=283 Identities=8% Similarity=0.021 Sum_probs=165.5
Q ss_pred CcceEEEeCCCCEEEEEEcCC--CCeEEEEeCCCCC--eEEEEeCCCCCceeEEEeCCCCeEEEEeC---CCCeEEEEec
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQ--YPRIGKSYLDGSK--WTSIVSNGISMPRDLTIDMQTHDVYWVDA---KLDLIQKISY 106 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~--~~~I~r~~~dG~~--~~~l~~~~~~~P~glaiD~~~~~lYw~d~---~~~~I~~~~~ 106 (407)
+|..++..+...++|...+.. ...|....+|... .+.+.......|.+|++++.++.||.++. ..+.|...++
T Consensus 3 ~p~~~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~ 82 (361)
T 3scy_A 3 QPTDPSTTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAF 82 (361)
T ss_dssp ---CCCGGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEE
T ss_pred CCCChhhCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEE
Confidence 466666666667778776532 2377777776432 22222214668999999999999999998 3467765555
Q ss_pred CC--CeEEEEc---cCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCC
Q psy950 107 NG--GNRQIIR---RNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDEN 181 (407)
Q Consensus 107 dG--~~~~~~~---~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~ 181 (407)
+. ...+.+. .....|.+++++++.||.++...+.|...+....+. . ..+.. .+.+... +.
T Consensus 83 ~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~---~-------~~~~~-~~~~~g~----~~ 147 (361)
T 3scy_A 83 DKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGA---L-------LPASD-VIEFKGS----GP 147 (361)
T ss_dssp ETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSC---B-------CSCSE-EEECCCC----CS
T ss_pred eCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCc---C-------cccce-eEEccCC----CC
Confidence 43 3333322 356789999997789999998888877777653111 0 00000 0111111 11
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCC-------C
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTL-------T 252 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~-------~ 252 (407)
++-.. ... ...|. .+.+|++ +|+++. ...+..+.++... .
T Consensus 148 ~~~~~----~~~---------------~~~~~-----~~spdg~-------~l~~~~~~~~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 148 DKERQ----TMP---------------HLHCV-----RITPDGK-------YLLADDLGTDQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp CTTTC----SSC---------------CEEEE-----EECTTSS-------EEEEEETTTTEEEEEEECTTCCTTTCCCC
T ss_pred Ccccc----CCC---------------cceEE-----EECCCCC-------EEEEEeCCCCEEEEEEEcCCCCcccccce
Confidence 11000 000 01111 1223332 233332 2234444444322 1
Q ss_pred ee----eeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc---------cCCCCccEEEEeccCCeEE
Q psy950 253 AV----PFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS---------SNLTNVVGVEFDYADDKIL 319 (407)
Q Consensus 253 ~~----~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~---------~~~~~~~glAvDwi~~~LY 319 (407)
.. ..........+.++.|++.++++|.++... +.|..+++++..... ... .+.+|++++.++.||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~~v~v~~~~~g~~~~~~~~~~~~~~~~-~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 197 LTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG-GTVIAFRYADGMLDEIQTVAADTVNAQ-GSGDIHLSPDGKYLY 274 (361)
T ss_dssp EEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-CEEEEEEEETTEEEEEEEEESCSSCCC-CEEEEEECTTSSEEE
T ss_pred eecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC-CeEEEEEecCCceEEeEEEecCCCCCC-CcccEEECCCCCEEE
Confidence 10 122233445678899999999999999777 778887776433211 112 567999999999999
Q ss_pred EEeCC-CCCeEEEEECC---CCcc-cc--cCCCceeEEEEcCCCCeEEEEeCC
Q psy950 320 FTQIR-PWAKIAWIPTT---NPSS-AS--SNLTNVVGVEFDYADDKILFTQIR 365 (407)
Q Consensus 320 wtd~~-~~~~I~v~~~~---~~~r-l~--~~l~~P~~iavdp~~g~lywtd~~ 365 (407)
.++.. . ++|.+.+++ +... +. ..-..|++++++|...+||.++..
T Consensus 275 v~~~~~~-~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 275 ASNRLKA-DGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEECSSS-CEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred EECCCCC-CEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence 99998 6 789998875 2212 11 124689999999998899999853
No 63
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=1.3e-07 Score=89.99 Aligned_cols=114 Identities=17% Similarity=0.142 Sum_probs=90.6
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeC----CCCCceeEEEeCCCCeEEEEeCC-----------
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN----GISMPRDLTIDMQTHDVYWVDAK----------- 97 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~----~~~~P~glaiD~~~~~lYw~d~~----------- 97 (407)
..|.+|++|+..|.||++|... .|.+.+.++...+.+... .+..|++|++|+..++||++|..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYY--HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTT--EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCC--CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 4699999999779999999863 688888886555555421 24579999999855699999975
Q ss_pred ------CCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 98 ------LDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 98 ------~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
.+.|.+.+.++...+.+...+..|.||++.. +.||++|...++|.+.+..+
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred hcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 2679999888766666666678999999986 47999999989999998775
No 64
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.98 E-value=1.6e-07 Score=88.26 Aligned_cols=77 Identities=5% Similarity=-0.051 Sum_probs=59.6
Q ss_pred EEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 69 TSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 69 ~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
+.++......++|.+.|+.++.|||+|...++|.+.+.++...+.+. ....|.++++.. +.+|.+. ...|.+.+..
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~ 81 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWK 81 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETT
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECC
Confidence 45566677799999999999999999999999999999887664433 335788999876 5666664 3567777765
Q ss_pred C
Q psy950 148 A 148 (407)
Q Consensus 148 ~ 148 (407)
+
T Consensus 82 ~ 82 (297)
T 3g4e_A 82 E 82 (297)
T ss_dssp T
T ss_pred C
Confidence 4
No 65
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=3.4e-07 Score=84.62 Aligned_cols=191 Identities=15% Similarity=0.156 Sum_probs=129.3
Q ss_pred CCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcc
Q psy950 77 SMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITL 154 (407)
Q Consensus 77 ~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~ 154 (407)
..+.|||.|+.+++||.+....++|..++.+|.-.+.+. .....+-||++.+ +.+|.++-..+++...+... .. .
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~--~~-~ 103 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP--NS-E 103 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT--TC-C
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC--CC-e
Confidence 579999999999999997777999999999987665543 5568999999988 56556666666666555443 00 0
Q ss_pred cEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceee
Q psy950 155 PTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYL 234 (407)
Q Consensus 155 ~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~L 234 (407)
... ......+. .. .
T Consensus 104 i~~-------------~~~~~~~~-~~---------------------------------------~------------- 117 (255)
T 3qqz_A 104 VKI-------------LKKIKIPL-QE---------------------------------------S------------- 117 (255)
T ss_dssp EEE-------------EEEEECCC-SS---------------------------------------C-------------
T ss_pred eee-------------eeeecccc-cc---------------------------------------c-------------
Confidence 000 00000000 00 0
Q ss_pred eeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeC--CCC--ccc--------ccC
Q psy950 235 VFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPT--TNP--SSA--------SSN 302 (407)
Q Consensus 235 l~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~--~~~--~~~--------~~~ 302 (407)
+ ......||+||+.+++||.+.......|+.++. .+. ... ..+
T Consensus 118 --------------~-----------~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 118 --------------P-----------TNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp --------------C-----------CSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred --------------c-----------ccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccccc
Confidence 0 001145788999989999887765246777761 111 111 034
Q ss_pred CCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc----cc-------cCCCceeEEEEcCCCCeEEEEeC
Q psy950 303 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS----AS-------SNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 303 ~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r----l~-------~~l~~P~~iavdp~~g~lywtd~ 364 (407)
. .+.+|++|+.+++||...... +.+..++.+|.-+ +. ....+|+|||+|| .|.||-+.-
T Consensus 173 ~-d~S~l~~dp~tg~lliLS~~s-~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE 242 (255)
T 3qqz_A 173 D-DVSGAEFNQQKNTLLVLSHES-RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSE 242 (255)
T ss_dssp S-CCCEEEEETTTTEEEEEETTT-TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEET
T ss_pred C-CceeEEEcCCCCeEEEEECCC-CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcC
Confidence 4 789999999999999999998 8999999888732 22 2347999999999 578999963
No 66
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.93 E-value=7.3e-06 Score=78.99 Aligned_cols=239 Identities=13% Similarity=0.154 Sum_probs=158.1
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
-..|.+++++|...+||.+..... .|...++........+... ..|.++++++.+++||++....+.|...++.....
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~-~i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSN-DVSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGT-EEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCcceEEECCCCCEEEEECCCCC-eEEEEECCCCeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 346999999999999999986553 8998888654444444432 38999999999999999998889999999987665
Q ss_pred EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCc
Q psy950 112 QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGN 189 (407)
Q Consensus 112 ~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~n 189 (407)
.........|.++++.. ..||.+....+.|...+..+ + .....+... ..|.
T Consensus 109 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~--~~~~~~~~~-~~~~----------------------- 161 (391)
T 1l0q_A 109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-K--AVINTVSVG-RSPK----------------------- 161 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-T--EEEEEEECC-SSEE-----------------------
T ss_pred EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-C--cEEEEEecC-CCcc-----------------------
Confidence 44444456789999875 57889988888888887664 2 111111100 0000
Q ss_pred ccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEeecCCcceEE
Q psy950 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTVSNLTNVVG 267 (407)
Q Consensus 190 g~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~~~~~~~~a 267 (407)
.+++ .+|++ .|+++. ...|..+.+.... ....+.....+.+
T Consensus 162 ----~~~~-----------------------~~dg~-------~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~ 204 (391)
T 1l0q_A 162 ----GIAV-----------------------TPDGT-------KVYVANFDSMSISVIDTVTNS---VIDTVKVEAAPSG 204 (391)
T ss_dssp ----EEEE-----------------------CTTSS-------EEEEEETTTTEEEEEETTTTE---EEEEEECSSEEEE
T ss_pred ----eEEE-----------------------CCCCC-------EEEEEeCCCCEEEEEECCCCe---EEEEEecCCCccc
Confidence 1111 11111 111111 1234434433221 1112223345778
Q ss_pred EEEEcCCCEEEEEEe--cCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc
Q psy950 268 VEFDYADDKILFTQI--RPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS 338 (407)
Q Consensus 268 ld~d~~~~~lywsd~--~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~ 338 (407)
+.+++.+++||.+.. .. +.|...++.+..... .....+.++++++.++.||.+.... ++|.+.++....
T Consensus 205 ~~~~~~g~~l~~~~~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d-~~v~v~d~~~~~ 277 (391)
T 1l0q_A 205 IAVNPEGTKAYVTNVDKYF-NTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX-NTVSVIDTATNT 277 (391)
T ss_dssp EEECTTSSEEEEEEECSSC-CEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT-TEEEEEETTTTE
T ss_pred eEECCCCCEEEEEecCcCC-CcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC-CEEEEEECCCCc
Confidence 899999999999986 45 779999987655433 2233788999999999999998888 899999987654
No 67
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.92 E-value=2.7e-07 Score=89.60 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=84.0
Q ss_pred CCCCcceEEEeCC---CCEEEEEEcC--CC----CeEEEEeCCCC-----CeEEEEe----CCCCCceeEEEeCCCCeEE
Q psy950 31 FRSANTTSPFSPL---PRLLYWIDYG--QY----PRIGKSYLDGS-----KWTSIVS----NGISMPRDLTIDMQTHDVY 92 (407)
Q Consensus 31 ~~~~P~~iavdp~---~g~lywtd~~--~~----~~I~r~~~dG~-----~~~~l~~----~~~~~P~glaiD~~~~~lY 92 (407)
+...|.+||++|. +|+||+++.. .. .+|.|...++. ..++++. .....|.+|++++. ++||
T Consensus 71 g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Ly 149 (354)
T 3a9g_A 71 GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLY 149 (354)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTT-SCEE
T ss_pred CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCC-CcEE
Confidence 4567999999998 8999999863 11 48999999876 2445543 22447899999995 5899
Q ss_pred EEeCC-------------CCeEEEEecCCC--------eEEEEccCCCCceEEEEeC--CEEEEEeCCCCe
Q psy950 93 WVDAK-------------LDLIQKISYNGG--------NRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRT 140 (407)
Q Consensus 93 w~d~~-------------~~~I~~~~~dG~--------~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~ 140 (407)
++... .++|.+++.||+ ..+++...+.+|+||+++. +.||.+|...+.
T Consensus 150 vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~ 220 (354)
T 3a9g_A 150 ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG 220 (354)
T ss_dssp EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSS
T ss_pred EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCC
Confidence 99642 368999999997 4456667789999999986 789999876543
No 68
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.90 E-value=1.3e-06 Score=82.60 Aligned_cols=115 Identities=9% Similarity=-0.008 Sum_probs=85.7
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCC-CeEEEEeCCCCCeEEEEe-CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQY-PRIGKSYLDGSKWTSIVS-NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG 109 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~-~~I~r~~~dG~~~~~l~~-~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~ 109 (407)
-..|.+|++|+. |.||.+|.+.. .+|.+.+......+.+.. .....|+|++++. .+++|++|...+.|.+++.++.
T Consensus 71 ~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 71 EGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp SSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTT
T ss_pred CCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCC
Confidence 357999999988 66999997643 268887754333444444 3456789999754 6789999998999999998865
Q ss_pred eEEEE-----------ccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 110 NRQII-----------RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 110 ~~~~~-----------~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
..++. ...+..|.||+.+++.||++|...++|.+.+...
T Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 149 SGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred cEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 33222 1346789999878889999999999998887653
No 69
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.89 E-value=1.2e-07 Score=91.90 Aligned_cols=110 Identities=12% Similarity=0.129 Sum_probs=82.4
Q ss_pred CCCCCcceEEEeCC---CCEEEEEEcCC----CCeEEEEeCCCC---CeEEEEe------CCCCCceeEEEeCCCCeEEE
Q psy950 30 SFRSANTTSPFSPL---PRLLYWIDYGQ----YPRIGKSYLDGS---KWTSIVS------NGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 30 ~~~~~P~~iavdp~---~g~lywtd~~~----~~~I~r~~~dG~---~~~~l~~------~~~~~P~glaiD~~~~~lYw 93 (407)
.+...|.+||++|. +++||+++... ..+|.|...++. ..++++. .....|.+|++++. ++||+
T Consensus 72 ~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv 150 (352)
T 2ism_A 72 RGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYV 150 (352)
T ss_dssp STTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEE
T ss_pred cCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEE
Confidence 34567999999998 89999998743 148999999864 3444543 12347899999995 58999
Q ss_pred EeCC-------------CCeEEEEecCC-------------CeEEEEccCCCCceEEEEeC--CEEEEEeCCCCe
Q psy950 94 VDAK-------------LDLIQKISYNG-------------GNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRT 140 (407)
Q Consensus 94 ~d~~-------------~~~I~~~~~dG-------------~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~ 140 (407)
++.. .++|.+++.+| ...+++...+.+|+||+++. +.||.+|...+.
T Consensus 151 ~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~ 225 (352)
T 2ism_A 151 TTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSG 225 (352)
T ss_dssp ECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC--
T ss_pred EECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCC
Confidence 9742 36899999998 33455556788999999986 789999866554
No 70
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.86 E-value=5.6e-06 Score=79.83 Aligned_cols=252 Identities=16% Similarity=0.139 Sum_probs=162.3
Q ss_pred CEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEccCCCCceEE
Q psy950 45 RLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGI 124 (407)
Q Consensus 45 g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~l 124 (407)
+++|.+.... ..|...+++.......+. ....|.++++++.++.||++....+.|...++..............+.++
T Consensus 2 ~~l~vs~~~d-~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSES-DNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGV 79 (391)
T ss_dssp EEEEEEETTT-TEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEE
T ss_pred CEEEEEcCCC-CEEEEEECCCCeEEEEee-cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccce
Confidence 5677777655 388888887544433444 23468999999999999999988899999998755543333333488899
Q ss_pred EEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCC
Q psy950 125 AVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVE 202 (407)
Q Consensus 125 av~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~ 202 (407)
++.. .+||.+....+.|...+..+ + .....+.. -..+. .+++
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~-~--~~~~~~~~-~~~~~---------------------------~~~~----- 123 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTS-N--TVAGTVKT-GKSPL---------------------------GLAL----- 123 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTT-T--EEEEEEEC-SSSEE---------------------------EEEE-----
T ss_pred EECCCCCEEEEEECCCCEEEEEECCC-C--eEEEEEeC-CCCcc---------------------------eEEE-----
Confidence 9875 67999988778888888765 2 11111110 00011 1111
Q ss_pred CCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEE
Q psy950 203 FPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFT 280 (407)
Q Consensus 203 ~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lyws 280 (407)
.+|++ .|+++. ...|....+.... ....+.....+.++.+++.++.||++
T Consensus 124 ------------------s~dg~-------~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~dg~~l~~~ 175 (391)
T 1l0q_A 124 ------------------SPDGK-------KLYVTNNGDKTVSVINTVTKA---VINTVSVGRSPKGIAVTPDGTKVYVA 175 (391)
T ss_dssp ------------------CTTSS-------EEEEEETTTTEEEEEETTTTE---EEEEEECCSSEEEEEECTTSSEEEEE
T ss_pred ------------------CCCCC-------EEEEEeCCCCEEEEEECCCCc---EEEEEecCCCcceEEECCCCCEEEEE
Confidence 11111 011111 1223333332211 11122233456788999999999999
Q ss_pred EecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeC--CCCCeEEEEECCCCcc--cccCCCceeEEEEcC
Q psy950 281 QIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQI--RPWAKIAWIPTTNPSS--ASSNLTNVVGVEFDY 354 (407)
Q Consensus 281 d~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~--~~~~~I~v~~~~~~~r--l~~~l~~P~~iavdp 354 (407)
.... +.|+..++.+..... .....+.++++++.++.||.+.. .. +.|.+.++..... .......|.+++++|
T Consensus 176 ~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 253 (391)
T 1l0q_A 176 NFDS-MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYF-NTVSMIDTGTNKITARIPVGPDPAGIAVTP 253 (391)
T ss_dssp ETTT-TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSC-CEEEEEETTTTEEEEEEECCSSEEEEEECT
T ss_pred eCCC-CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCC-CcEEEEECCCCeEEEEEecCCCccEEEEcc
Confidence 8877 889999987665433 23337889999999999999986 55 6899999887653 233445789999999
Q ss_pred CCCeEEEEeC
Q psy950 355 ADDKILFTQI 364 (407)
Q Consensus 355 ~~g~lywtd~ 364 (407)
...+||.+..
T Consensus 254 dg~~l~~s~~ 263 (391)
T 1l0q_A 254 DGKKVYVALS 263 (391)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEEcC
Confidence 9888988854
No 71
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.86 E-value=9.3e-10 Score=80.44 Aligned_cols=47 Identities=34% Similarity=0.670 Sum_probs=41.0
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccccee
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEY 233 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~ 233 (407)
..|+|.. +||+|+|+|++++++ +|.|.|+.||.|.+|+++|.+.++|
T Consensus 4 d~~eC~~-~nggC~h~C~n~~g~------s~~C~C~~Gy~L~~D~~tC~d~dec 50 (69)
T 1kli_L 4 DQLICVN-ENGGCEQYCSDHTGT------KRSCRCHEGYSLLADGVSCTPTVEY 50 (69)
T ss_dssp CCCCTTS-GGGGCSSEEEEETTT------EEEEECCTTEEECTTSSCEEECSSS
T ss_pred ccccccC-CCCCcCCEeEcCCCC------CEEEeCCCCCeECCCCCcccCcccc
Confidence 4689987 899999999998873 6999999999999999999865554
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.85 E-value=3.7e-06 Score=80.02 Aligned_cols=270 Identities=12% Similarity=0.077 Sum_probs=158.0
Q ss_pred CEEEEEEcCC--CCeEEEEeCCCCC-e-EEE-EeCCCCCceeEEEeCCCCeEEEEeCC--CCeEEEEecCCCeEEEEc--
Q psy950 45 RLLYWIDYGQ--YPRIGKSYLDGSK-W-TSI-VSNGISMPRDLTIDMQTHDVYWVDAK--LDLIQKISYNGGNRQIIR-- 115 (407)
Q Consensus 45 g~lywtd~~~--~~~I~r~~~dG~~-~-~~l-~~~~~~~P~glaiD~~~~~lYw~d~~--~~~I~~~~~dG~~~~~~~-- 115 (407)
.+||...+.. ...|....+|... . +.+ .......|.+|++++.++ ||+++.. .+.|...++++...+.+.
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 81 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV 81 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee
Confidence 4677776531 2367777777532 2 111 112356899999999665 9999864 678999998766543332
Q ss_pred -cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccc
Q psy950 116 -RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGC 192 (407)
Q Consensus 116 -~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~C 192 (407)
.....|.+|++.+ ..||.++...+.|...+....+. ...+. .+.+. +..|... ..+.
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~---~~~~~---------~~~~~------~~~p~~~-~~~~- 141 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA---LTLTD---------TVQHS------GHGPRPE-QDGS- 141 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC---EEEEE---------EEECC------CCCSSTT-CSSC-
T ss_pred ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC---eeecc---------eeecC------CCCCCcc-ccCC-
Confidence 3567899999986 57999988777776666543121 11111 00110 0111100 0000
Q ss_pred cccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeee--EeecCCcceEEE
Q psy950 193 EQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPF--KTVSNLTNVVGV 268 (407)
Q Consensus 193 s~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~--~~~~~~~~~~al 268 (407)
...|. .+.+|++ ++++. ...|..+.+.....-... ........+..+
T Consensus 142 ----------------~~~~~-----~~spdg~--------l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 142 ----------------HIHYT-----DLTPDNR--------LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp ----------------CEEEE-----EECTTSC--------EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred ----------------CceEE-----EECCCCc--------EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 00111 1223332 22221 223444444421111111 122233457789
Q ss_pred EEEcCCCEEEEEEecCCceEEEEeCCC--Cccc-c----cCC------CCccEEEEeccCCeEEEEeCCCCCeEEEEECC
Q psy950 269 EFDYADDKILFTQIRPWAKIAWIPTTN--PSSA-S----SNL------TNVVGVEFDYADDKILFTQIRPWAKIAWIPTT 335 (407)
Q Consensus 269 d~d~~~~~lywsd~~~~~~I~~~~~~~--~~~~-~----~~~------~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~ 335 (407)
+|++.++++|+++... +.|....++. .... . ... ..+.++++++.++.||.++... ++|.+.+++
T Consensus 193 ~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-~~v~v~~~~ 270 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELS-SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-NTLAVFAVT 270 (347)
T ss_dssp EECTTSSEEEEEETTT-TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-TEEEEEEEC
T ss_pred EECCCCCEEEEEeCCC-CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-CEEEEEEEC
Confidence 9999999999998877 7777766653 2211 0 111 1478899999999999999888 799999886
Q ss_pred CCc--c-c---ccCCCceeEEEEcCCCCeEEEEeCCC
Q psy950 336 NPS--S-A---SSNLTNVVGVEFDYADDKILFTQIRP 366 (407)
Q Consensus 336 ~~~--r-l---~~~l~~P~~iavdp~~g~lywtd~~~ 366 (407)
... . + ......|++++++|...+||.++...
T Consensus 271 ~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 271 ADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp GGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTT
T ss_pred CCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCC
Confidence 321 2 2 22346799999999988999998753
No 73
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.84 E-value=4.7e-06 Score=79.41 Aligned_cols=226 Identities=11% Similarity=0.062 Sum_probs=141.3
Q ss_pred eEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEE
Q psy950 25 KKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104 (407)
Q Consensus 25 ~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~ 104 (407)
+.+......-|.+.+.||..+.+||+|.... +|.+.+.++...+.+.. -..|.+|++++. +++|++. .+.|..+
T Consensus 41 ~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~-~i~~~d~~~~~~~~~~~--~~~v~~i~~~~d-g~l~v~~--~~gl~~~ 114 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPASGTAWWFNILER-ELHELHLASGRKTVHAL--PFMGSALAKISD-SKQLIAS--DDGLFLR 114 (326)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEEGGGT-EEEEEETTTTEEEEEEC--SSCEEEEEEEET-TEEEEEE--TTEEEEE
T ss_pred EEeeccCCCCCcCCeEeCCCCEEEEEECCCC-EEEEEECCCCcEEEEEC--CCcceEEEEeCC-CeEEEEE--CCCEEEE
Confidence 4445555667899999999999999998754 99999998765544332 247899999985 6677765 3458888
Q ss_pred ecCCCeEEEEccC-----CCCceEEEEeC-CEEEEEeCCC------CeEEEEecCCCCCCcccEEcccCCCCceeeEEee
Q psy950 105 SYNGGNRQIIRRN-----LPNPMGIAVHK-SDVYWVDRNL------RTVYKASKLASTNITLPTPIRTGLSGLRDIAIFD 172 (407)
Q Consensus 105 ~~dG~~~~~~~~~-----~~~P~~lav~~-~~lYwtd~~~------~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~ 172 (407)
+.++...+.+... ...|.+++++. +.+|+++... +.|++++
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--------------------------- 167 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--------------------------- 167 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---------------------------
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe---------------------------
Confidence 8865554433211 12455666655 4555543211 0111111
Q ss_pred ecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCC
Q psy950 173 IVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLT 252 (407)
Q Consensus 173 ~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~ 252 (407)
++ .+..+
T Consensus 168 --------------------------------------------------~g----------------~~~~~------- 174 (326)
T 2ghs_A 168 --------------------------------------------------KG----------------KVTKL------- 174 (326)
T ss_dssp --------------------------------------------------TT----------------EEEEE-------
T ss_pred --------------------------------------------------CC----------------cEEEe-------
Confidence 00 00000
Q ss_pred eeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCC--CC-cc-----ccc---CCCCccEEEEeccCCeEEEE
Q psy950 253 AVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT--NP-SS-----ASS---NLTNVVGVEFDYADDKILFT 321 (407)
Q Consensus 253 ~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~--~~-~~-----~~~---~~~~~~glAvDwi~~~LYwt 321 (407)
......+.++.+++.++.+|+++... +.|.+++++ +. .. ... ....|.||++|.-+ +||.+
T Consensus 175 ------~~~~~~~~~i~~s~dg~~lyv~~~~~-~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva 246 (326)
T 2ghs_A 175 ------FADISIPNSICFSPDGTTGYFVDTKV-NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNA 246 (326)
T ss_dssp ------EEEESSEEEEEECTTSCEEEEEETTT-CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEE
T ss_pred ------eCCCcccCCeEEcCCCCEEEEEECCC-CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEE
Confidence 00011234667777788888888776 778888764 22 11 111 12278999999765 68888
Q ss_pred eCCCCCeEEEEECCCCcc--cccCCCceeEEEEc-CCCCeEEEEeCC
Q psy950 322 QIRPWAKIAWIPTTNPSS--ASSNLTNVVGVEFD-YADDKILFTQIR 365 (407)
Q Consensus 322 d~~~~~~I~v~~~~~~~r--l~~~l~~P~~iavd-p~~g~lywtd~~ 365 (407)
.... +.|.+++.++... +......|.+++++ |..+.||.+...
T Consensus 247 ~~~~-~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 247 RWGE-GAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EETT-TEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EeCC-CEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 8776 6899998866532 32344679999998 888889988753
No 74
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=8.8e-07 Score=86.40 Aligned_cols=266 Identities=8% Similarity=-0.047 Sum_probs=152.0
Q ss_pred CCCEEEEEEcCCC--C-eEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC---------CCCeEEEEecCCCe
Q psy950 43 LPRLLYWIDYGQY--P-RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA---------KLDLIQKISYNGGN 110 (407)
Q Consensus 43 ~~g~lywtd~~~~--~-~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~---------~~~~I~~~~~dG~~ 110 (407)
...++|.++.+.+ . +|...+.+.....--+..+ ..| ++++++.+++||+++. ..+.|..+|+.-..
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 3478999988643 2 5666655543332223333 368 9999999999999983 46889999987554
Q ss_pred E-EEEc-c------CCCCceEEEEeC--CEEEEEeCC-CCeEEE--EecCCCCCCcccEEcccCCCCceeeEEeeecCCC
Q psy950 111 R-QIIR-R------NLPNPMGIAVHK--SDVYWVDRN-LRTVYK--ASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQP 177 (407)
Q Consensus 111 ~-~~~~-~------~~~~P~~lav~~--~~lYwtd~~-~~~I~~--~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp 177 (407)
. ..+. . .+..|.++++.. .++|.++.. .+.|.. ++..+ ...+. +
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~--v--------------- 164 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTK--S--------------- 164 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEE--C---------------
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh------ceEEE--C---------------
Confidence 4 3332 2 136799999965 689999875 445554 33221 11111 0
Q ss_pred CCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCC--------C---------------Ccccccceee
Q psy950 178 PDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASD--------P---------------KKCTTMDEYL 234 (407)
Q Consensus 178 ~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d--------~---------------~~C~~~~~~L 234 (407)
++|.|+ .+... ..|...|+.|..+.-| + .........+
T Consensus 165 ------------~~~~~~-~p~g~------~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~ 225 (368)
T 1mda_H 165 ------------ASCFHI-HPGAA------ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML 225 (368)
T ss_dssp ------------SSCCCC-EEEET------TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred ------------CCceEE-ccCCC------eEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEE
Confidence 011111 00000 0122222222110000 0 0011111223
Q ss_pred eeecccceEEeecCCCCCeeeeEeec--------CCcceEE---EEEEcCCCEEEEEEe---c-----CCceEEEEeCCC
Q psy950 235 VFSTRTEIRALHLDPTLTAVPFKTVS--------NLTNVVG---VEFDYADDKILFTQI---R-----PWAKIAWIPTTN 295 (407)
Q Consensus 235 l~s~~~~I~~i~l~~~~~~~~~~~~~--------~~~~~~a---ld~d~~~~~lywsd~---~-----~~~~I~~~~~~~ 295 (407)
+|++...+.-+.+...... .+..+. ....+.+ +.+++.++++|++.. . . .....+++..
T Consensus 226 ~~vs~~~V~viD~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~-~~~~ViD~~t 303 (368)
T 1mda_H 226 VWAVASSILQGDIPAAGAT-MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA-ENTSSVTASV 303 (368)
T ss_dssp EECBSSCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE-EEEEEEESSS
T ss_pred EEEcCCEEEEEECCCCcce-EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC-CCEEEEECCC
Confidence 3333355655555332111 111110 1112222 678999999999865 3 3 3456888877
Q ss_pred Ccccc--cCCCCccEEEEeccCCeEEEEeC-CCCCeEEEEECCCCccc--ccCCCceeEEEEcCC
Q psy950 296 PSSAS--SNLTNVVGVEFDYADDKILFTQI-RPWAKIAWIPTTNPSSA--SSNLTNVVGVEFDYA 355 (407)
Q Consensus 296 ~~~~~--~~~~~~~glAvDwi~~~LYwtd~-~~~~~I~v~~~~~~~rl--~~~l~~P~~iavdp~ 355 (407)
...+. .++..|.||++.+-++.+|+++. .. ++|.|+++.....+ ..-...|.+|++++.
T Consensus 304 ~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~-~~VsVID~~t~kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 304 GQTSGPISNGHDSDAIIAAQDGASDNYANSAGT-EVLDIYDAASDQDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp CCEEECCEEEEEECEEEECCSSSCEEEEEETTT-TEEEEEESSSCEEEEECCCCSCCCEEECCCC
T ss_pred CeEEEEEECCCCcceEEECCCCCEEEEEccCCC-CeEEEEECCCCcEEEEEECCCCCCEEEeecC
Confidence 65544 44557999999999999999999 67 89999999887653 335589999999875
No 75
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.82 E-value=1.7e-06 Score=80.85 Aligned_cols=239 Identities=14% Similarity=0.144 Sum_probs=136.9
Q ss_pred EeCCCCCceeEEEeCCCCeEEEE-------eCCCCeEEEEecCCCeEEEEcc-----CCCCceEEEEeC--CEEEEEeCC
Q psy950 72 VSNGISMPRDLTIDMQTHDVYWV-------DAKLDLIQKISYNGGNRQIIRR-----NLPNPMGIAVHK--SDVYWVDRN 137 (407)
Q Consensus 72 ~~~~~~~P~glaiD~~~~~lYw~-------d~~~~~I~~~~~dG~~~~~~~~-----~~~~P~~lav~~--~~lYwtd~~ 137 (407)
+..++..|.++++|+ .++|||+ +...+.|.+.+......+.+.. ....|.+++++. +.||+++..
T Consensus 13 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp EECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred hhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 355788999999995 6799999 8788899999975544433322 346799999976 589999875
Q ss_pred CCeEEEEecCCCCCCcccEEc-ccC-----CCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceE
Q psy950 138 LRTVYKASKLASTNITLPTPI-RTG-----LSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYK 211 (407)
Q Consensus 138 ~~~I~~~~~~~~g~~~~~~~i-~~~-----~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~ 211 (407)
. .|.+.+..+ . ...+ ... ...|.+|.+.. .+ .-+.
T Consensus 92 ~-~l~~~d~~g--~---~~~~~~~~~~~~~~~~~~~i~~d~---------------------------~g------~l~v 132 (314)
T 1pjx_A 92 L-GLLVVQTDG--T---FEEIAKKDSEGRRMQGCNDCAFDY---------------------------EG------NLWI 132 (314)
T ss_dssp T-EEEEEETTS--C---EEECCSBCTTSCBCBCCCEEEECT---------------------------TS------CEEE
T ss_pred C-CEEEEeCCC--C---EEEEEeccCCCccccCCcCEEECC---------------------------CC------CEEE
Confidence 4 788877653 1 1222 110 01122222110 00 0011
Q ss_pred EecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEE----cCCCEEEEEEecCCce
Q psy950 212 CDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFD----YADDKILFTQIRPWAK 287 (407)
Q Consensus 212 C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d----~~~~~lywsd~~~~~~ 287 (407)
+....+.. ..+. +... ......|..+..+ ... ..+ ......+.++.++ +.++.||+++... +.
T Consensus 133 ~~~~~~~~-~~~~--~~~~-----~~~~~~l~~~~~~-g~~-~~~--~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~-~~ 199 (314)
T 1pjx_A 133 TAPAGEVA-PADY--TRSM-----QEKFGSIYCFTTD-GQM-IQV--DTAFQFPNGIAVRHMNDGRPYQLIVAETPT-KK 199 (314)
T ss_dssp EECBCBCT-TSCC--CBTT-----SSSCEEEEEECTT-SCE-EEE--EEEESSEEEEEEEECTTSCEEEEEEEETTT-TE
T ss_pred EecCcccc-cccc--cccc-----cCCCCeEEEECCC-CCE-EEe--ccCCCCcceEEEecccCCCCCEEEEEECCC-Ce
Confidence 11000000 0000 0000 0001123333322 111 111 1122346678888 7777999999877 78
Q ss_pred EEEEeCCC-Cc-----ccccCC----CCccEEEEeccCCeEEEEeCCCCCeEEEEECC-CCc-c-cccCCCceeEEEEcC
Q psy950 288 IAWIPTTN-PS-----SASSNL----TNVVGVEFDYADDKILFTQIRPWAKIAWIPTT-NPS-S-ASSNLTNVVGVEFDY 354 (407)
Q Consensus 288 I~~~~~~~-~~-----~~~~~~----~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~-~~~-r-l~~~l~~P~~iavdp 354 (407)
|.+.+.++ .. ....+. ..|.+|++|.- ++||+++... +.|.+++.+ +.. . +......|.+++++|
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~l~v~~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~ 277 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED-NNLLVANWGS-SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP 277 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT-CCEEEEEETT-TEEEEECTTCBSCSEEEECSSSCEEEEEECT
T ss_pred EEEEECCCCCccccceEEEECCCCCCCCCCceEECCC-CCEEEEEcCC-CEEEEEcCCCCcEeEEEeCCCCCceeEEECC
Confidence 88887652 11 111111 26899999984 5899998877 789999987 432 1 222447899999998
Q ss_pred CCCeEEEEeCC
Q psy950 355 ADDKILFTQIR 365 (407)
Q Consensus 355 ~~g~lywtd~~ 365 (407)
...+||.++..
T Consensus 278 dg~~l~v~~~~ 288 (314)
T 1pjx_A 278 QTKTIFVTEHE 288 (314)
T ss_dssp TSSEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 87779988753
No 76
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.82 E-value=1.9e-06 Score=80.13 Aligned_cols=191 Identities=14% Similarity=0.124 Sum_probs=117.8
Q ss_pred CCceeEEEeCCCCeEEEEeC--CCCeEEEEecCCCeE-EEE-ccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCC
Q psy950 77 SMPRDLTIDMQTHDVYWVDA--KLDLIQKISYNGGNR-QII-RRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNI 152 (407)
Q Consensus 77 ~~P~glaiD~~~~~lYw~d~--~~~~I~~~~~dG~~~-~~~-~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~ 152 (407)
..|.||++++. ++||.+.. ..++|..+++.-... ..+ ......+.|+++.+++||.++|..+.+..++..+
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t---- 95 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT---- 95 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTT----
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCC----
Confidence 36899999986 79999975 468999999974443 333 2444566688999999999999999999999775
Q ss_pred cccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccce
Q psy950 153 TLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE 232 (407)
Q Consensus 153 ~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~ 232 (407)
.+++.. + . .. +|. |+-|.+|++
T Consensus 96 --~~v~~~-i------~--~g--~~~--------------------------------------g~glt~Dg~------- 117 (266)
T 2iwa_A 96 --LSNIKN-F------T--HQ--MKD--------------------------------------GWGLATDGK------- 117 (266)
T ss_dssp --TEEEEE-E------E--CC--SSS--------------------------------------CCEEEECSS-------
T ss_pred --CcEEEE-E------E--CC--CCC--------------------------------------eEEEEECCC-------
Confidence 222220 0 0 00 010 111111221
Q ss_pred eeeeecc-cceEEeecCCCCCee-eeEeec----CCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCC-
Q psy950 233 YLVFSTR-TEIRALHLDPTLTAV-PFKTVS----NLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNL- 303 (407)
Q Consensus 233 ~Ll~s~~-~~I~~i~l~~~~~~~-~~~~~~----~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~- 303 (407)
.|+.++. ..+.-+ ++..... ...++. .+..+-.+++. +++||...... +.|.+++..+..++. .++
T Consensus 118 ~l~vs~gs~~l~vi--D~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~-~~V~vID~~tg~V~~~I~~~g 192 (266)
T 2iwa_A 118 ILYGSDGTSILYEI--DPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQT-DCIARISAKDGTLLGWILLPN 192 (266)
T ss_dssp SEEEECSSSEEEEE--CTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS-SEEEEEETTTCCEEEEEECHH
T ss_pred EEEEECCCCeEEEE--ECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCC-CeEEEEECCCCcEEEEEECCC
Confidence 0222221 122222 2211111 011111 11234567776 67899887777 889999997765443 221
Q ss_pred -------------CCccEEEEeccCCeEEEEeCCCCCeEEEEECCC
Q psy950 304 -------------TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 304 -------------~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
..+.|||+|.-++.||.|.... +++.++++..
T Consensus 193 ~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~-~~v~~i~l~~ 237 (266)
T 2iwa_A 193 LRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW-PKLFEIKLHL 237 (266)
T ss_dssp HHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC-SEEEEEEEEE
T ss_pred cccccccccccccCceEEEEEcCCCCEEEEECCCC-CeEEEEEEec
Confidence 2668999999999999999988 8999987653
No 77
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.82 E-value=1.4e-06 Score=86.52 Aligned_cols=280 Identities=5% Similarity=-0.040 Sum_probs=155.1
Q ss_pred eeeeecCCcceEEEcCCC-CCcceEEEeCCCCEEEEEEcC--------CCCeEEEEeCCCCCe-EEEEeC---C---CCC
Q psy950 15 RLALRLLKKKKKLKTSFR-SANTTSPFSPLPRLLYWIDYG--------QYPRIGKSYLDGSKW-TSIVSN---G---ISM 78 (407)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~-~~P~~iavdp~~g~lywtd~~--------~~~~I~r~~~dG~~~-~~l~~~---~---~~~ 78 (407)
.+..+|....+++-.-.+ ..| +|+++|..++||.++.. ....|...+...... ..|.-. . ...
T Consensus 100 ~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred eEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCC
Confidence 455666655554433222 358 99999999999999862 123677777654333 223221 0 247
Q ss_pred ceeEEEeCCCCeEEEEeCC-CCeEEEEecCCCeE-EEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccE
Q psy950 79 PRDLTIDMQTHDVYWVDAK-LDLIQKISYNGGNR-QIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPT 156 (407)
Q Consensus 79 P~glaiD~~~~~lYw~d~~-~~~I~~~~~dG~~~-~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~ 156 (407)
|.++++++.+++||+++.. .+.|.++|+..... ..+.- ....++.-.+...|.+....+++..++... ++ ..
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~-~~---v~ 252 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDCYHIFPASPTVFYMNCRDGSLARVDFAD-GE---TK 252 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSSEEEEECCT-TC---CE
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCceeeccCCCcEEEEEcCCCCEEEEECCC-Cc---EE
Confidence 9999999999999999975 78999999976654 23221 111223333456666666666666666532 21 11
Q ss_pred EcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeee
Q psy950 157 PIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVF 236 (407)
Q Consensus 157 ~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~ 236 (407)
.... .+++...+| -.. + ..+.++++ .+++.
T Consensus 253 ~~~~--------~~~~v~~~p------~~~--~----------------------------~~~~~dg~------~~~~~ 282 (426)
T 3c75_H 253 VTNT--------EVFHTEDEL------LIN--H----------------------------PAFSLRSG------RLVWP 282 (426)
T ss_dssp EEEC--------CCCSCTTSC------BCS--C----------------------------CEECTTTC------EEEEE
T ss_pred EEee--------eeeccCCCc------eee--E----------------------------eeecCCCC------EEEEE
Confidence 1000 111111111 100 0 00011111 01111
Q ss_pred ecccceEEeecCCCCCee--eeEe-----ecCCcceE---EEEEEcCCCEEEEEEec---------CCceEEEEeCCCCc
Q psy950 237 STRTEIRALHLDPTLTAV--PFKT-----VSNLTNVV---GVEFDYADDKILFTQIR---------PWAKIAWIPTTNPS 297 (407)
Q Consensus 237 s~~~~I~~i~l~~~~~~~--~~~~-----~~~~~~~~---ald~d~~~~~lywsd~~---------~~~~I~~~~~~~~~ 297 (407)
+....+.-+.+....... ++.. +.....+. .+.+++.++++|+++.. . +.|..+++.+..
T Consensus 283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s-~~VsVID~~T~k 361 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS-RFVVVLNAETGE 361 (426)
T ss_dssp BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE-EEEEEEETTTCC
T ss_pred eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC-CEEEEEECCCCe
Confidence 111222222221110000 0000 00001111 25788999999999752 2 579999998876
Q ss_pred ccc--cCCCCccEEEEeccCC-eEEEEeCCCCCeEEEEECCCCcccc--cCC-CceeEEEEcC
Q psy950 298 SAS--SNLTNVVGVEFDYADD-KILFTQIRPWAKIAWIPTTNPSSAS--SNL-TNVVGVEFDY 354 (407)
Q Consensus 298 ~~~--~~~~~~~glAvDwi~~-~LYwtd~~~~~~I~v~~~~~~~rl~--~~l-~~P~~iavdp 354 (407)
++. .++..|.+|+|++-++ .||.++... ++|.|+++.....+. ..+ ..|. +++.|
T Consensus 362 vv~~I~vg~~P~gia~spDg~~~lyv~n~~s-~~VsVID~~t~kvv~tI~~vG~~P~-~i~~~ 422 (426)
T 3c75_H 362 RINKIELGHEIDSINVSQDAEPLLYALSAGT-QTLHIYDAATGEELRSVDQLGRGPQ-IITTH 422 (426)
T ss_dssp EEEEEEEEEEECEEEECCSSSCEEEEEETTT-TEEEEEETTTCCEEEEECCCSSSCC-EEECC
T ss_pred EEEEEECCCCcCeEEEccCCCEEEEEEcCCC-CeEEEEECCCCCEEEEecCCCCCCc-EEEcC
Confidence 655 5554799999999999 999999887 899999998775432 233 4454 55544
No 78
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=5.1e-06 Score=81.31 Aligned_cols=291 Identities=8% Similarity=-0.003 Sum_probs=163.7
Q ss_pred EEEeCCCCEEEEEEcC----CCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC---------CCCeEEEE
Q psy950 38 SPFSPLPRLLYWIDYG----QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA---------KLDLIQKI 104 (407)
Q Consensus 38 iavdp~~g~lywtd~~----~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~---------~~~~I~~~ 104 (407)
.+-.|..+++|.+|++ . ..|...+.+-.....-+..+. .|. |++++.+++||+++. ..+.|..+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~-~~V~ViD~~t~~v~~~I~vG~-~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAV-TQQFVIDGEAGRVIGMIDGGF-LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSS-EEEEEEETTTTEEEEEEEECS-SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCC-CEEEEEECCCCeEEEEEECCC-CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 4456889999999986 3 377777766443333334343 585 999999999999984 35679999
Q ss_pred ecCCCeE-EEEc-c------CCCCceEEEEeC--CEEEEEeCC-CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeee
Q psy950 105 SYNGGNR-QIIR-R------NLPNPMGIAVHK--SDVYWVDRN-LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDI 173 (407)
Q Consensus 105 ~~dG~~~-~~~~-~------~~~~P~~lav~~--~~lYwtd~~-~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~ 173 (407)
|...... ..+. . ...+|+++++.. .+||.++.. .+.|..++..+ + +....+. +... ..++..
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t-~--~vv~tI~--v~g~--~~~~P~ 187 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-K--AFKRMLD--VPDC--YHIFPT 187 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-T--EEEEEEE--CCSE--EEEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC-C--cEEEEEE--CCCc--ceeecC
Confidence 9876554 3332 2 145899999965 789999874 67888898775 1 2222221 1111 111111
Q ss_pred cCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc------ccce-eeeeecccceEEee
Q psy950 174 VNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT------TMDE-YLVFSTRTEIRALH 246 (407)
Q Consensus 174 ~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~------~~~~-~Ll~s~~~~I~~i~ 246 (407)
...+ ..--|.. | +.+.+..... +.-.=.-...+ ..+...+. .++. +++.+....+.-+.
T Consensus 188 g~~~--~~~~~~D---G--~~~~v~~~~~-----g~v~~~~~~~~--~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d 253 (386)
T 3sjl_D 188 APDT--FFMHCRD---G--SLAKVAFGTE-----GTPEITHTEVF--HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQID 253 (386)
T ss_dssp ETTE--EEEEETT---S--CEEEEECCSS-----SCCEEEECCCC--SCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEE
T ss_pred CCce--eEEECCC---C--CEEEEECCCC-----CeEEEeeccee--ccccccccccceeEcCCCcEEEEeCCCEEEEEE
Confidence 1000 0001110 0 1111111100 00000000111 11111111 0122 33444445566565
Q ss_pred cCCCCCeeeeEeec--------CC---cceEEEEEEcCCCEEEEEEec---------CCceEEEEeCCCCcccc--cCCC
Q psy950 247 LDPTLTAVPFKTVS--------NL---TNVVGVEFDYADDKILFTQIR---------PWAKIAWIPTTNPSSAS--SNLT 304 (407)
Q Consensus 247 l~~~~~~~~~~~~~--------~~---~~~~ald~d~~~~~lywsd~~---------~~~~I~~~~~~~~~~~~--~~~~ 304 (407)
+...... +..++. .. .....+.+++..+++|++... . ++|..+++.+..++. .++.
T Consensus 254 ~~~~~~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~-~~V~viD~~t~kv~~~i~vg~ 331 (386)
T 3sjl_D 254 LSSGDAK-FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS-RFVVVLDAKTGERLAKFEMGH 331 (386)
T ss_dssp CTTSSCE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE-EEEEEEETTTCCEEEEEEEEE
T ss_pred CCCCcce-eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC-CEEEEEECCCCeEEEEEECCC
Confidence 5433211 111111 00 011135668999999998642 2 579999998876655 5555
Q ss_pred CccEEEEeccCC-eEEEEeCCCCCeEEEEECCCCccc--ccCCCceeEEEEcCC
Q psy950 305 NVVGVEFDYADD-KILFTQIRPWAKIAWIPTTNPSSA--SSNLTNVVGVEFDYA 355 (407)
Q Consensus 305 ~~~glAvDwi~~-~LYwtd~~~~~~I~v~~~~~~~rl--~~~l~~P~~iavdp~ 355 (407)
.+.+|+|+.-.+ .||-++... +.|.+++......+ .....+|..|++-+-
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~-~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGD-KTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTT-TEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CcceEEECCCCCeEEEEEcCCC-CeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 789999999997 678889888 89999998766543 345578888877654
No 79
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.81 E-value=2.6e-05 Score=74.50 Aligned_cols=249 Identities=11% Similarity=0.032 Sum_probs=143.0
Q ss_pred CCCCcceEEEeCCCCEEEEEEcC--CCCeEEEEeCCCC--CeEEEE--eCCCCCceeEEEeCCCCeEEEEeCCCCeEEEE
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYG--QYPRIGKSYLDGS--KWTSIV--SNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~--~~~~I~r~~~dG~--~~~~l~--~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~ 104 (407)
....|..++++|...+||.++.. ....|....++.. ..+.+. ......|..+++ .++.||.++...+.|...
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56789999999999999999874 2246765555543 222222 223457999999 578899999888999998
Q ss_pred ecCCCeE-----EEEc----------cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCC-c--c-cEEcccCCC
Q psy950 105 SYNGGNR-----QIIR----------RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNI-T--L-PTPIRTGLS 163 (407)
Q Consensus 105 ~~dG~~~-----~~~~----------~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~-~--~-~~~i~~~~~ 163 (407)
+++.... ..+. +...+|.++++.+ .+||.++...+.|...+... ... . . .....
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~-~~~~~~~~~l~~~~---- 200 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINP-NANADNKEKFLTKG---- 200 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TCCTTTCCCCEEEE----
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcC-CCCcccccceeecc----
Confidence 8863211 1111 1234668899976 57999998888776665543 110 0 0 10000
Q ss_pred CceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccc
Q psy950 164 GLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTE 241 (407)
Q Consensus 164 ~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~ 241 (407)
..... ..+. .. +-.++++ .+|++ +|+++. ...
T Consensus 201 ---~~~~~---~~~~-~~---------~~~~~~~-----------------------spdg~-------~l~v~~~~~~~ 234 (361)
T 3scy_A 201 ---TPEAF---KVAP-GS---------GPRHLIF-----------------------NSDGK-------FAYLINEIGGT 234 (361)
T ss_dssp ---EEEEE---ECCT-TC---------CEEEEEE-----------------------CTTSS-------EEEEEETTTCE
T ss_pred ---cccce---ecCC-CC---------CCeEEEE-----------------------cCCCC-------EEEEEcCCCCe
Confidence 00000 0000 00 0011111 22222 122221 123
Q ss_pred eEEeecCCCCCeeeeEee----cCCcceEEEEEEcCCCEEEEEEec-CCceEEEEeCC--CCcc-cc---cCCCCccEEE
Q psy950 242 IRALHLDPTLTAVPFKTV----SNLTNVVGVEFDYADDKILFTQIR-PWAKIAWIPTT--NPSS-AS---SNLTNVVGVE 310 (407)
Q Consensus 242 I~~i~l~~~~~~~~~~~~----~~~~~~~ald~d~~~~~lywsd~~-~~~~I~~~~~~--~~~~-~~---~~~~~~~glA 310 (407)
|..+.+...... .+..+ .....+.++.+++.+++||.++.. . +.|....++ +... .. ..+..|.+|+
T Consensus 235 v~v~~~~~g~~~-~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~-~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~ 312 (361)
T 3scy_A 235 VIAFRYADGMLD-EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA-DGVAIFKVDETNGTLTKVGYQLTGIHPRNFI 312 (361)
T ss_dssp EEEEEEETTEEE-EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS-CEEEEEEECTTTCCEEEEEEEECSSCCCEEE
T ss_pred EEEEEecCCceE-EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC-CEEEEEEEcCCCCcEEEeeEecCCCCCceEE
Confidence 333333221110 01111 112346789999999999999987 6 667776664 2221 11 2244899999
Q ss_pred EeccCCeEEEEeCCCCCeEEEEECC
Q psy950 311 FDYADDKILFTQIRPWAKIAWIPTT 335 (407)
Q Consensus 311 vDwi~~~LYwtd~~~~~~I~v~~~~ 335 (407)
+++-++.||.++... +.|.+...+
T Consensus 313 ~spdg~~l~~~~~~~-~~v~v~~~d 336 (361)
T 3scy_A 313 ITPNGKYLLVACRDT-NVIQIFERD 336 (361)
T ss_dssp ECTTSCEEEEEETTT-TEEEEEEEC
T ss_pred ECCCCCEEEEEECCC-CCEEEEEEE
Confidence 999999999999887 788886554
No 80
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=1.2e-07 Score=91.17 Aligned_cols=83 Identities=13% Similarity=0.117 Sum_probs=62.1
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCC----CCeEEEEeCCCCC-eEEEEe-CC----CCCceeEEEeCCCCeEEEEeC---C
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQ----YPRIGKSYLDGSK-WTSIVS-NG----ISMPRDLTIDMQTHDVYWVDA---K 97 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~----~~~I~r~~~dG~~-~~~l~~-~~----~~~P~glaiD~~~~~lYw~d~---~ 97 (407)
.+..|.+|++|+. |.|||+|.+. .++|.+.+++... ...+.- .. ...|++|++|+.++++|++|. .
T Consensus 65 ~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 3678999999998 8899999862 3599999987333 333321 11 135799999998899999999 7
Q ss_pred CCeEEEEecCC-CeEEEE
Q psy950 98 LDLIQKISYNG-GNRQII 114 (407)
Q Consensus 98 ~~~I~~~~~dG-~~~~~~ 114 (407)
.+.|.+.+++. ...+++
T Consensus 144 ~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVL 161 (343)
T ss_dssp GCEEEEEETTTCCEEEEC
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 88999999874 433443
No 81
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.80 E-value=5.6e-06 Score=79.87 Aligned_cols=256 Identities=14% Similarity=0.079 Sum_probs=153.1
Q ss_pred ceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe------CCCCCceeEEEeCC---CCeEEEE
Q psy950 24 KKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS------NGISMPRDLTIDMQ---THDVYWV 94 (407)
Q Consensus 24 ~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~------~~~~~P~glaiD~~---~~~lYw~ 94 (407)
...++..++..|++||++|. |.||.++... .+|.+...++...+.+.. .+..-|.|||+++. ++.||++
T Consensus 23 ~~~~va~gL~~P~~ia~~pd-G~llVter~~-G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPG-GDLLVSSRDE-ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEEECCCSSEEEEEECTT-SCEEEEETTT-CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred eeEEeecCCCCceEEEEcCC-CcEEEEEecC-CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 34467789999999999997 7799999744 489999876444443321 24557999999994 7899987
Q ss_pred eC--CCCeEEEEecCCC--------eEEEEcc-----CCCCceEEEEeC-CEEEEEeC-------------CCCeEEEEe
Q psy950 95 DA--KLDLIQKISYNGG--------NRQIIRR-----NLPNPMGIAVHK-SDVYWVDR-------------NLRTVYKAS 145 (407)
Q Consensus 95 d~--~~~~I~~~~~dG~--------~~~~~~~-----~~~~P~~lav~~-~~lYwtd~-------------~~~~I~~~~ 145 (407)
.. ..++|.+..+++. ..+++.. .......|++.. ++||++.. ..++|.|++
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 53 5678999998872 2344331 233456688876 79999942 246899999
Q ss_pred cCCC---CCCc-ccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCcccc
Q psy950 146 KLAS---TNIT-LPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSA 221 (407)
Q Consensus 146 ~~~~---g~~~-~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~ 221 (407)
.+++ ++.. ..+++..++..|.++.+.. . +.-.+......+-..+....++. .| ||-.
T Consensus 181 ~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp-~-----G~L~~~d~g~~~~deln~i~~G~------ny------GwP~- 241 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYSYGHRNVQGLAWDD-K-----QRLFASEFGQDTWDELNAIKPGD------NY------GWPE- 241 (347)
T ss_dssp TTSSBCTTCSSTTCCEEEBCCSBCCEEEECT-T-----CCEEEEECCSSSCEEEEEECTTC------BC------CTTT-
T ss_pred CCCCccCCCCCCCCeEEeeCCCCcceEEECC-C-----CCEEEEecCCCCCceeeEEcCCC------Ee------cCCc-
Confidence 8862 0000 2456777778888887642 1 11111110001112233333332 11 2211
Q ss_pred CCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecC-CcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCccc-
Q psy950 222 SDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSN-LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSA- 299 (407)
Q Consensus 222 ~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~-~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~- 299 (407)
|.... .......|+..... ...+.++.|. ++.+|...... .+|.++.+++....
T Consensus 242 -----~~g~~----------------~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~-~~l~~v~~~~~~~~~ 297 (347)
T 3das_A 242 -----AEGKG----------------GGSGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRG-ERLWRIPLKGTAAAA 297 (347)
T ss_dssp -----CCSSC----------------CCTTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTT-CSEEEEEEETTEESS
T ss_pred -----ccCCC----------------CCccccCCcEecCCCCCCCcceEEE--cCceeeccccC-CEEEEEEecCCceec
Confidence 11000 00011222222211 1346677776 68999998888 78999888764321
Q ss_pred --c----cCCCCccEEEEeccCCeEEEEeCCC
Q psy950 300 --S----SNLTNVVGVEFDYADDKILFTQIRP 325 (407)
Q Consensus 300 --~----~~~~~~~glAvDwi~~~LYwtd~~~ 325 (407)
. +...+|.+|++++- +.||+++...
T Consensus 298 ~~e~~l~~~~gR~~dv~~~pD-G~lyv~td~~ 328 (347)
T 3das_A 298 DPQAFLEGEYGRLRTVAPAGG-DKLWLVTSNT 328 (347)
T ss_dssp CCEEESTTTSSCEEEEEEEET-TEEEEEECTT
T ss_pred ceEEeecCCCCCccEEEECCC-CcEEEEEcCC
Confidence 1 33238999999985 5888885543
No 82
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.77 E-value=5.5e-06 Score=76.46 Aligned_cols=202 Identities=14% Similarity=0.143 Sum_probs=128.1
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
..++.|||+||..+.||-.... .++|.+.+.+|.-...+.-.+...++|||++. ++++|.++...+++....++....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~-~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINK-PAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEET-TEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCC
T ss_pred ccCcceeEEeCCCCEEEEEECC-CCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCe
Confidence 4679999999999999986655 46999999998766666545667999999996 567888888889988887654331
Q ss_pred -E---EEccC-CCCc-----eEEEEeC--CEEEEEeCCCC-eEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCC
Q psy950 112 -Q---IIRRN-LPNP-----MGIAVHK--SDVYWVDRNLR-TVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPP 178 (407)
Q Consensus 112 -~---~~~~~-~~~P-----~~lav~~--~~lYwtd~~~~-~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~ 178 (407)
. ..... ...| .|||+++ ++||.+.-... .|++.+... . . ..+++... |
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~--~--~-----------~~l~i~~~---~- 164 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL--S--S-----------NELHISKD---K- 164 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTT--C--S-----------SCCEEEEC---H-
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccc--c--C-----------Cceeeecc---h-
Confidence 1 11111 1234 7899886 46666543322 333333100 0 0 00111000 0
Q ss_pred CCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEe
Q psy950 179 DENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKT 258 (407)
Q Consensus 179 ~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~ 258 (407)
. +...
T Consensus 165 ------------------------------~-------------------------------------~~~~-------- 169 (255)
T 3qqz_A 165 ------------------------------A-------------------------------------LQRQ-------- 169 (255)
T ss_dssp ------------------------------H-------------------------------------HHHT--------
T ss_pred ------------------------------h-------------------------------------hccc--------
Confidence 0 0000
Q ss_pred ecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc------------cCCCCccEEEEeccCCeEEEEeCCCC
Q psy950 259 VSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS------------SNLTNVVGVEFDYADDKILFTQIRPW 326 (407)
Q Consensus 259 ~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~------------~~~~~~~glAvDwi~~~LYwtd~~~~ 326 (407)
..+..+.+++||+..+++|...... ..+..++.+|..... .+. .|||||+|.- ++||.++..+
T Consensus 170 -~~~~d~S~l~~dp~tg~lliLS~~s-~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~-qpEGia~d~~-G~lyIvsE~n- 244 (255)
T 3qqz_A 170 -FTLDDVSGAEFNQQKNTLLVLSHES-RALQEVTLVGEVIGEMSLTKGSRGLSHNIK-QAEGVAMDAS-GNIYIVSEPN- 244 (255)
T ss_dssp -CCSSCCCEEEEETTTTEEEEEETTT-TEEEEECTTCCEEEEEECSTTGGGCSSCCC-SEEEEEECTT-CCEEEEETTT-
T ss_pred -cccCCceeEEEcCCCCeEEEEECCC-CeEEEEcCCCCEEEEEEcCCccCCcccccC-CCCeeEECCC-CCEEEEcCCc-
Confidence 0012346788999999999988777 777777777653221 133 8999999995 5799997665
Q ss_pred CeEEEEECC
Q psy950 327 AKIAWIPTT 335 (407)
Q Consensus 327 ~~I~v~~~~ 335 (407)
.++++...
T Consensus 245 -~~y~f~~~ 252 (255)
T 3qqz_A 245 -RFYRFTPQ 252 (255)
T ss_dssp -EEEEEEC-
T ss_pred -eEEEEEec
Confidence 78888654
No 83
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.77 E-value=1.1e-06 Score=87.30 Aligned_cols=265 Identities=10% Similarity=0.058 Sum_probs=151.1
Q ss_pred CCCCEEEEEEcCC-C--CeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC---------CCCeEEEEecCCC
Q psy950 42 PLPRLLYWIDYGQ-Y--PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA---------KLDLIQKISYNGG 109 (407)
Q Consensus 42 p~~g~lywtd~~~-~--~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~---------~~~~I~~~~~dG~ 109 (407)
|...++|.++.+. . ..|...+.+-....--+..+. .| +|++++.+++||+++. ..+.|..+|....
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4557899999863 1 378888776544433344343 79 9999999999999995 3568999988655
Q ss_pred eE-EEEc-c------CCCCceEEEEeC--CEEEEEeCC-CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCC
Q psy950 110 NR-QIIR-R------NLPNPMGIAVHK--SDVYWVDRN-LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPP 178 (407)
Q Consensus 110 ~~-~~~~-~------~~~~P~~lav~~--~~lYwtd~~-~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~ 178 (407)
.. ..+. . ....|.++++.. .+||.++.. .+.|..++... .+++.. +.-
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t------~kvv~~-I~v-------------- 218 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG------KTFDRM-LDV-------------- 218 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT------TEEEEE-EEC--------------
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC------CeEEEE-EEc--------------
Confidence 44 3332 2 146799999965 799999875 67898888775 222220 000
Q ss_pred CCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceEEe-e--cCCCCCee
Q psy950 179 DENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIRAL-H--LDPTLTAV 254 (407)
Q Consensus 179 ~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~~i-~--l~~~~~~~ 254 (407)
++|.+ ..|.+ ...|.-.|+.|.. +++.. ...+... . ++... .
T Consensus 219 -----------~g~~~---~~p~g----~~~~v~~~~dG~~--------------~~V~~~~~~v~~~~~~~~~v~~--~ 264 (426)
T 3c75_H 219 -----------PDCYH---IFPAS----PTVFYMNCRDGSL--------------ARVDFADGETKVTNTEVFHTED--E 264 (426)
T ss_dssp -----------CSEEE---EEEEE----TTEEEEEETTSSE--------------EEEECCTTCCEEEECCCCSCTT--S
T ss_pred -----------CCcee---eccCC----CcEEEEEcCCCCE--------------EEEECCCCcEEEEeeeeeccCC--C
Confidence 11210 01100 0124445554432 11111 0111100 0 00000 0
Q ss_pred eeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc------------cCCCCccE---EEEeccCCeEE
Q psy950 255 PFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS------------SNLTNVVG---VEFDYADDKIL 319 (407)
Q Consensus 255 ~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~------------~~~~~~~g---lAvDwi~~~LY 319 (407)
+ + ...+.|....+++|++.. . ++++.+++.+..... ..+..|.| ++++.-++.||
T Consensus 265 p---~-----~~~~~~~~dg~~~~~~s~-~-g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rly 334 (426)
T 3c75_H 265 L---L-----INHPAFSLRSGRLVWPTY-T-GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIY 334 (426)
T ss_dssp C---B-----CSCCEECTTTCEEEEEBT-T-SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEE
T ss_pred c---e-----eeEeeecCCCCEEEEEeC-C-CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEE
Confidence 0 0 011344555566665543 3 456666654332110 11113444 99999999999
Q ss_pred EEeCC---------CCCeEEEEECCCCccccc-CC-CceeEEEEcCCCC-eEEEEeCCCCCcccccCC
Q psy950 320 FTQIR---------PWAKIAWIPTTNPSSASS-NL-TNVVGVEFDYADD-KILFTQIRPWAKIAWIPT 375 (407)
Q Consensus 320 wtd~~---------~~~~I~v~~~~~~~rl~~-~l-~~P~~iavdp~~g-~lywtd~~~~~~ia~~dg 375 (407)
.++.. . ++|.|+++.....+.+ .+ ..|.+|+++|-.. +||-++|++. .+.-+|-
T Consensus 335 Va~~~~~~gthk~~s-~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~-~VsVID~ 400 (426)
T 3c75_H 335 LLVDQRDEWKHKAAS-RFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQ-TLHIYDA 400 (426)
T ss_dssp EEEEECCTTCTTSCE-EEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTT-EEEEEET
T ss_pred EEecccccccccCCC-CEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCC-eEEEEEC
Confidence 99752 2 5799999988765332 22 4699999999988 8998888542 3444443
No 84
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.76 E-value=1e-06 Score=85.35 Aligned_cols=260 Identities=8% Similarity=0.035 Sum_probs=142.8
Q ss_pred CCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-------cCCCCceEEEEe-----CCEEE
Q psy950 65 GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-------RNLPNPMGIAVH-----KSDVY 132 (407)
Q Consensus 65 G~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-------~~~~~P~~lav~-----~~~lY 132 (407)
|-..+++.+ ++..|.+|++++.+++||+++. .++|.+++.+|...+.+. .....|.+|+++ +++||
T Consensus 7 g~~~~~va~-~l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lY 84 (353)
T 2g8s_A 7 TVNVEVLQD-KLDHPWALAFLPDNHGMLITLR-GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIW 84 (353)
T ss_dssp CSEEEEEEE-EESSEEEEEECSTTCCEEEEET-TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEE
T ss_pred CcEEEEEEC-CCCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEE
Confidence 333444444 6889999999996544999997 489999988775432221 234568999998 58999
Q ss_pred EEeCC-------CCeEEEEecCCCC-CCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCC
Q psy950 133 WVDRN-------LRTVYKASKLAST-NITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFP 204 (407)
Q Consensus 133 wtd~~-------~~~I~~~~~~~~g-~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~ 204 (407)
+++.. ..+|.|......+ .....+++ +. ..|. ... + ++.-..|.+.
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i------------~~--~~p~-~~~-~----~h~~~~l~~~------ 138 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTV------------FR--QMPK-LST-G----NHFGGRLVFD------ 138 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEE------------EE--CSSC-CBS-S----SCCCCCEEEC------
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEE------------EE--ECCC-CCC-C----cccCccEEEC------
Confidence 99754 3467777655310 00111111 11 1111 000 0 0000112211
Q ss_pred CCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCC-Ce---------eeeEeecCCcceEEEEEEcCC
Q psy950 205 QNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTL-TA---------VPFKTVSNLTNVVGVEFDYAD 274 (407)
Q Consensus 205 ~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~-~~---------~~~~~~~~~~~~~ald~d~~~ 274 (407)
|.|+..-..+..|..+...-+-.....|.++..+... .. .+.....+++++.++++|+..
T Consensus 139 ----------pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~ 208 (353)
T 2g8s_A 139 ----------GKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWS 208 (353)
T ss_dssp ----------SSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTT
T ss_pred ----------CCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCC
Confidence 1111110001001000000000112367777765431 00 111223467899999999989
Q ss_pred CEEEEEEecC--CceEEEEeCCCC--------------------------ccc-c----cCCCCccEEEEec------cC
Q psy950 275 DKILFTQIRP--WAKIAWIPTTNP--------------------------SSA-S----SNLTNVVGVEFDY------AD 315 (407)
Q Consensus 275 ~~lywsd~~~--~~~I~~~~~~~~--------------------------~~~-~----~~~~~~~glAvDw------i~ 315 (407)
+.||.+|... ...|.++.-.+. ... + .-...|.||++.- ..
T Consensus 209 g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~ 288 (353)
T 2g8s_A 209 NALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQ 288 (353)
T ss_dssp TEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGT
T ss_pred CCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccC
Confidence 9999999864 134544322110 000 0 1112688999963 24
Q ss_pred CeEEEEeCCCCCeEEEEECCCCc-----ccccC-CCceeEEEEcCCCCeEEEEeC
Q psy950 316 DKILFTQIRPWAKIAWIPTTNPS-----SASSN-LTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 316 ~~LYwtd~~~~~~I~v~~~~~~~-----rl~~~-l~~P~~iavdp~~g~lywtd~ 364 (407)
+++|+++... ++|.++++++.. ++.+. ..+|++|+++|. |.||.++.
T Consensus 289 g~l~v~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~lyv~td 341 (353)
T 2g8s_A 289 QKLFIGALKD-KDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD-GYLYVLTD 341 (353)
T ss_dssp TEEEEEETTT-TEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT-SCEEEEEC
T ss_pred CcEEEEEccC-CEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC-CcEEEEEe
Confidence 7899999998 899999987643 13333 469999999995 77999743
No 85
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.75 E-value=2.9e-05 Score=79.52 Aligned_cols=299 Identities=11% Similarity=0.024 Sum_probs=178.3
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEE--EeCCCCCceeEEEeC----CCCeEEEEeCCCCeEEEEecCC
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSI--VSNGISMPRDLTIDM----QTHDVYWVDAKLDLIQKISYNG 108 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l--~~~~~~~P~glaiD~----~~~~lYw~d~~~~~I~~~~~dG 108 (407)
|.+++++|..++||.++.+ ..|...+++....+.+ +.. -..|.++++++ .+++||.++...++|..++...
T Consensus 181 ~~~v~~spdg~~l~v~~~d--~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD--ARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETT--SEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCC--CeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 8999999999999999887 4899999952222222 222 34799999999 9999999998889999988754
Q ss_pred CeE-EEEcc-C----------CCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeec
Q psy950 109 GNR-QIIRR-N----------LPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIV 174 (407)
Q Consensus 109 ~~~-~~~~~-~----------~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~ 174 (407)
... +++.. . ...+.+|++.. ..+|.+....+.|..++... . .... ++.....
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~-~--~~l~-----------~~~i~~~ 323 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD-I--DNLT-----------VTSIGAA 323 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT-S--SSCE-----------EEEEECC
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC-C--Ccce-----------eEEeccC
Confidence 433 33321 1 12456777754 68888888888888888664 1 1111 0000000
Q ss_pred CCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCC
Q psy950 175 NQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLT 252 (407)
Q Consensus 175 ~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~ 252 (407)
.. +.+..+.+|++ +++.+. ...|.-+.+.....
T Consensus 324 ~~--------------------------------------~~~~~~spdg~-------~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 324 PF--------------------------------------LHDGGWDSSHR-------YFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp SS--------------------------------------CCCEEECTTSC-------EEEEEEGGGTEEEEEETTTTEE
T ss_pred cC--------------------------------------ccCceECCCCC-------EEEEEecCCCeEEEEECCCCeE
Confidence 00 01111233443 222222 22344444333211
Q ss_pred eeeeEeecCC---cceEEEEEEcCCCEEEEEEe-cCCceEEEEeCCCC-------cccc---cCCCCccEEEEeccCCeE
Q psy950 253 AVPFKTVSNL---TNVVGVEFDYADDKILFTQI-RPWAKIAWIPTTNP-------SSAS---SNLTNVVGVEFDYADDKI 318 (407)
Q Consensus 253 ~~~~~~~~~~---~~~~ald~d~~~~~lywsd~-~~~~~I~~~~~~~~-------~~~~---~~~~~~~glAvDwi~~~L 318 (407)
. ...++... .....+ +++..+.+|.+.. .. ++|..++.+.. ..+. ..+..+..|++.+-+++|
T Consensus 359 ~-~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d-~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l 435 (543)
T 1nir_A 359 S-ALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGD-GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHL 435 (543)
T ss_dssp E-EEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSS-SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEE
T ss_pred E-EeeccCCCCCCCCCccc-CCCCCccEEEeccCCC-ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcE
Confidence 1 11111111 112222 4677788888775 45 78999988762 2211 233367889999999999
Q ss_pred EEEeCC------CCCeEEEEECCCCccc------------ccCCCceeEEEEcCCCCeEEEEeCC---CCCcccccCCCC
Q psy950 319 LFTQIR------PWAKIAWIPTTNPSSA------------SSNLTNVVGVEFDYADDKILFTQIR---PWAKIAWIPTTN 377 (407)
Q Consensus 319 Ywtd~~------~~~~I~v~~~~~~~rl------------~~~l~~P~~iavdp~~g~lywtd~~---~~~~ia~~dg~~ 377 (407)
|..... . ++|.+++.+...++ .+.-.++..+++.|...+||.+.|. ....|.-+|-..
T Consensus 436 ~v~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 436 YVDTTFNPDARIS-QSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp EECCTTCSSHHHH-TCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred EEecCCCCCcccC-ceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 987631 2 48999999865432 1235789999999999999999984 234452222111
Q ss_pred CCCcceeEEE---eCCCccceeeccch
Q psy950 378 PSSASVNTIL---SRGKDEKAKIENEQ 401 (407)
Q Consensus 378 ~~~~~~~~l~---~~~~~~~~~~~~~~ 401 (407)
+.-+++|. ...+++|+-+.|++
T Consensus 515 --~~~~~~i~~~~~~~p~g~~~~~~~~ 539 (543)
T 1nir_A 515 --LKLKAVVKDPRLITPTGKFNVYNTQ 539 (543)
T ss_dssp --TEEEEEECCTTCCSEEEEEEHHHHH
T ss_pred --ceEEEeecCCCccCCCeeeeccccc
Confidence 22333343 44556677777765
No 86
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.75 E-value=2.8e-05 Score=75.17 Aligned_cols=264 Identities=9% Similarity=0.023 Sum_probs=145.2
Q ss_pred CCcceEEEeCCCCEEEEEEcC--------CCCeEEEEeCCCCCe-EEEEeC-----CCCCceeEEEeCCCCeEEEEeCC-
Q psy950 33 SANTTSPFSPLPRLLYWIDYG--------QYPRIGKSYLDGSKW-TSIVSN-----GISMPRDLTIDMQTHDVYWVDAK- 97 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~--------~~~~I~r~~~dG~~~-~~l~~~-----~~~~P~glaiD~~~~~lYw~d~~- 97 (407)
..| +|+++|..++||.++.. ....|...+.+.... ..+-.. ....|.+|++++.+++||.++..
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 458 99999999999999841 123588877763332 333211 12479999999999999999976
Q ss_pred CCeEEEEecCCCeEEEE-ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeec
Q psy950 98 LDLIQKISYNGGNRQII-RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIV 174 (407)
Q Consensus 98 ~~~I~~~~~dG~~~~~~-~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~ 174 (407)
.+.|..++.+....... .. .....++.++. ...|.+-...+++..+.....++ ....... ..+++..
T Consensus 130 ~~~v~v~d~~~~~~~~~~i~-~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~--~~~~~~~-------~~~~~~~ 199 (361)
T 2oiz_A 130 ATSIGIVDVAKGDYVEDVTA-AAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK--VASQSRS-------KQMFSVK 199 (361)
T ss_dssp SEEEEEEETTTTEEEEEEGG-GTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS--EEEEEEC-------CCCSCTT
T ss_pred CCeEEEEECCCCcEEEEEec-CCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc--Eeeeccc-------cceEcCC
Confidence 68999999976544221 21 12223344443 24444444444444444332111 0000000 0011111
Q ss_pred CCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCee
Q psy950 175 NQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAV 254 (407)
Q Consensus 175 ~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~ 254 (407)
..|... . ..+++. .+++.+....+..+.+......
T Consensus 200 ------~~~~~~-~-------------------------------~~~~g~------~~~~~~~~~~v~v~d~~~~~~~- 234 (361)
T 2oiz_A 200 ------DDPIFI-A-------------------------------PALDKD------KAHFVSYYGNVYSADFSGDEVK- 234 (361)
T ss_dssp ------TSCBCS-C-------------------------------CEECSS------EEEEEBTTSEEEEEECSSSSCE-
T ss_pred ------CCceEE-E-------------------------------ecccCC------EEEEEeCCCeEEEEEecCCCce-
Confidence 111110 0 001110 0111111122222322211100
Q ss_pred eeEee--------cCCcceE---EEEEEcCCCEEEEEEe-c---------CCceEEEEeCCCCcccc--cCCCCccEEEE
Q psy950 255 PFKTV--------SNLTNVV---GVEFDYADDKILFTQI-R---------PWAKIAWIPTTNPSSAS--SNLTNVVGVEF 311 (407)
Q Consensus 255 ~~~~~--------~~~~~~~---ald~d~~~~~lywsd~-~---------~~~~I~~~~~~~~~~~~--~~~~~~~glAv 311 (407)
...+. .....+. .+.+++.++++|.+.. . . ..|..+++.+...+. .++. |.+||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~-~~v~viD~~t~~~v~~i~~~~-p~~ia~ 312 (361)
T 2oiz_A 235 VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA-AEIWVMDTKTKQRVARIPGRD-ALSMTI 312 (361)
T ss_dssp EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC-SEEEEEETTTTEEEEEEECTT-CCEEEE
T ss_pred ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC-ceEEEEECCCCcEEEEEecCC-eeEEEE
Confidence 00000 0000111 2678888999999865 1 2 478999988766554 5564 999999
Q ss_pred eccCCeEEEEeCCCCCeEEEEECCCC--ccc---ccCCCceeEEEEcCCCC
Q psy950 312 DYADDKILFTQIRPWAKIAWIPTTNP--SSA---SSNLTNVVGVEFDYADD 357 (407)
Q Consensus 312 Dwi~~~LYwtd~~~~~~I~v~~~~~~--~rl---~~~l~~P~~iavdp~~g 357 (407)
++-++.||-++. ++|.+++.... ..+ ..--..|++|+++|..+
T Consensus 313 spdg~~l~v~n~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 313 DQQRNLMLTLDG---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTTTEEEEECS---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCCCEEEEeCC---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999999999886 47999998876 543 23348999999999654
No 87
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.73 E-value=4.3e-05 Score=71.39 Aligned_cols=257 Identities=8% Similarity=-0.071 Sum_probs=145.4
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCC-----CCceeEEEeCCCCeEEEEeC-----------C
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGI-----SMPRDLTIDMQTHDVYWVDA-----------K 97 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~-----~~P~glaiD~~~~~lYw~d~-----------~ 97 (407)
.|.+++++|..+++|.++... ..|...++........+.... ..|.++++++.+++||+++. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKS-ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTT-TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCC-CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 599999999988999998765 489999987554433333221 16899999999999999962 3
Q ss_pred CCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCC-CCceeeEEeeec
Q psy950 98 LDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGL-SGLRDIAIFDIV 174 (407)
Q Consensus 98 ~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~-~~p~~i~i~~~~ 174 (407)
.+.|...++++............|.++++.. .+||.+ ++.|...+..+ + .....+.... ..|.
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~-~--~~~~~~~~~~~~~~~-------- 179 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEA-G--TLVEDKPIQSWEAET-------- 179 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTT-T--EEEEEECSTTTTTTT--------
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCC-C--cEeeeeeccccCCCc--------
Confidence 5889999998765533333356788899865 568888 35677777664 2 1111111000 0000
Q ss_pred CCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCee
Q psy950 175 NQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAV 254 (407)
Q Consensus 175 ~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~ 254 (407)
... .++ ..+-+..... ......|...-. .++. ..+. .....|..+.+......
T Consensus 180 ---------~~s-~dg--~~l~~~~~~~-~~~~~~~~~~~~------~~~~--~~~~-----~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 180 ---------YAQ-PDV--LAVWNQHESS-GVMATPFYTARK------DIDP--ADPT-----AYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp ---------BCC-CBC--CCCCCCCTTT-TEEEEEEEEEBT------TSCT--TSGG-----GEEEEEEEEETTTCCEE-
T ss_pred ---------eeC-CCc--cEEeeeccCC-Cceeeeeecccc------cccc--cccc-----ccccceEEEeCCCCCce-
Confidence 000 000 0000000000 000000000000 0000 0000 00012333444332211
Q ss_pred eeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEE
Q psy950 255 PFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWI 332 (407)
Q Consensus 255 ~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~ 332 (407)
..........+.++.+++.++++|.+ . +.|..+++.+..... ..+..|.++++++-++.||.+. .. +.|.+.
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~---~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~-~~i~v~ 306 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA---Y-NVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG-AL-GDLAAY 306 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE---E-SEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEES-BS-SEEEEE
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe---C-CeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEc-CC-CcEEEE
Confidence 11111122456789999999999988 3 568888887655433 3344899999999999899884 45 689999
Q ss_pred ECCCCc
Q psy950 333 PTTNPS 338 (407)
Q Consensus 333 ~~~~~~ 338 (407)
++....
T Consensus 307 d~~~~~ 312 (337)
T 1pby_B 307 DAETLE 312 (337)
T ss_dssp ETTTCC
T ss_pred ECcCCc
Confidence 987654
No 88
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.72 E-value=7.7e-05 Score=72.65 Aligned_cols=258 Identities=7% Similarity=-0.043 Sum_probs=145.4
Q ss_pred CcceEEEeCCCCEEEEEEcC--------CCCeEEEEeCCCCCeEEEEeCC-------CCCceeEEEeCCCCeEEEEeCC-
Q psy950 34 ANTTSPFSPLPRLLYWIDYG--------QYPRIGKSYLDGSKWTSIVSNG-------ISMPRDLTIDMQTHDVYWVDAK- 97 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~--------~~~~I~r~~~dG~~~~~l~~~~-------~~~P~glaiD~~~~~lYw~d~~- 97 (407)
.| +|++.|..++||.++.. ....|...+........-+..+ ...|.++++++.+++||+++..
T Consensus 68 ~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 68 LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 48 99999999999999842 1236778877633222222211 2469999999999999999875
Q ss_pred CCeEEEEecCCCeEEEEccCCCCceEEEE--eCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecC
Q psy950 98 LDLIQKISYNGGNRQIIRRNLPNPMGIAV--HKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVN 175 (407)
Q Consensus 98 ~~~I~~~~~dG~~~~~~~~~~~~P~~lav--~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~ 175 (407)
.+.|..++ +....... .+..|..+.+ .+...|++.+..+++..++. . ++ ........ .++ ...
T Consensus 147 ~~~v~viD-~t~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~-g~--~~~~~~~~-------~~~-~~~ 211 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQ--LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-A-GG--AAGAGLVG-------AML-TAA 211 (373)
T ss_pred CCeEEEEE-CCCCEEeE--EcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-C-Cc--EEEEEecc-------ccc-cCC
Confidence 68899998 65543211 0233333444 34678888888887777776 4 22 11111000 000 000
Q ss_pred CCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeee
Q psy950 176 QPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVP 255 (407)
Q Consensus 176 qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~ 255 (407)
+|. ..++-. ..++. .+++.+....+..+.+...... .
T Consensus 212 ~p~-~~~~~~-----------------------------------~~~~~------~~~~~~~~~~v~vid~~~~~~~-v 248 (373)
T 2mad_H 212 QNL-LTQPAQ-----------------------------------ANKSG------RIVWPVYSGKILQADISAAGAT-N 248 (373)
T ss_pred cce-eeccee-----------------------------------EecCC------EEEEEcCCceEEEEeccCCcce-E
Confidence 010 000000 00000 0111111122222222111000 0
Q ss_pred eEee--------cC---CcceEEEEEEcCCCEEEEEEec---------CCceEEEEeCCCCcccc--cCCCCccEEEEec
Q psy950 256 FKTV--------SN---LTNVVGVEFDYADDKILFTQIR---------PWAKIAWIPTTNPSSAS--SNLTNVVGVEFDY 313 (407)
Q Consensus 256 ~~~~--------~~---~~~~~ald~d~~~~~lywsd~~---------~~~~I~~~~~~~~~~~~--~~~~~~~glAvDw 313 (407)
+..+ .. ......+.+++.++++|.+... . +.|..+++.+...+. .++..|.+|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~-~~V~VID~~t~~vv~~i~~g~~p~~i~~s~ 327 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA-KEVTSVTGLVGQTSSQISLGHDVDAISVAQ 327 (373)
T ss_pred eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCC-CeEEEEECCCCEEEEEEECCCCcCeEEECC
Confidence 0000 00 0112236678889999998642 2 579999988766544 5554799999999
Q ss_pred cCC-eEEEEeCCCCCeEEEEECCCCccc---ccCCCceeEEEE
Q psy950 314 ADD-KILFTQIRPWAKIAWIPTTNPSSA---SSNLTNVVGVEF 352 (407)
Q Consensus 314 i~~-~LYwtd~~~~~~I~v~~~~~~~rl---~~~l~~P~~iav 352 (407)
-++ .+|-++... ++|.++++.....+ ..--..|.+|.+
T Consensus 328 Dg~~~l~v~~~~~-~~V~ViD~~t~~vv~~i~~vG~~P~~~~~ 369 (373)
T 2mad_H 328 DGGPDLYALSAGT-EVLHIYDAGAGDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred CCCeEEEEEcCCC-CeEEEEECCCCCEEeeecCCCCCCcEEEE
Confidence 999 777777777 79999999877543 223367888775
No 89
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.71 E-value=5.4e-09 Score=72.30 Aligned_cols=43 Identities=37% Similarity=0.750 Sum_probs=36.7
Q ss_pred ccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccccee
Q psy950 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEY 233 (407)
Q Consensus 184 C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~ 233 (407)
|.. +|++|+|+|++++++ +|+|.|+.||.|.+|+++|.+.+++
T Consensus 2 C~~-~nggC~~~C~n~~gg------s~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 2 CVN-ENGGCEQYCSDHTGT------KRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp TTS-GGGGCSSEEEEETTT------EEEEECCTTEEECTTSSCEEECSSS
T ss_pred CcC-CCCCcCCEeEcCCCC------CEEeeCCCCCEECCCCCcccCCccc
Confidence 655 789999999998873 5999999999999999999865544
No 90
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.69 E-value=7.3e-09 Score=73.27 Aligned_cols=40 Identities=33% Similarity=0.682 Sum_probs=34.9
Q ss_pred ccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccc
Q psy950 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 184 C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~ 230 (407)
|.. +||+|+|+|++.+++ +|.|.|+.||.|.+|+++|.+.
T Consensus 2 C~~-~nggC~~~C~n~~~g------s~~C~C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 2 CNI-KNGRCEQFCKNSADN------KVVCSCTEGYRLAENQKSCEPA 41 (59)
T ss_dssp TTT-GGGGCSSEEEECSTT------CEEEECCTTEEECTTSSCEEES
T ss_pred CcC-CCCCcCCEeEeCCCC------CEEeeCCCCcEECCCCCcccCC
Confidence 555 789999999999842 6999999999999999999853
No 91
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.66 E-value=4.8e-05 Score=74.22 Aligned_cols=273 Identities=8% Similarity=0.037 Sum_probs=169.5
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeC-----CCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN-----GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN 107 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~-----~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d 107 (407)
..|.+++++| .+.+|.+.... ..|...+++.......... ....+.++++++ ++++|++....+.|...+++
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLED-EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTS-SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEeC-CCeEEEEeCCC-CeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECC
Confidence 4588999999 88998887654 3799999885544432221 122466788855 67899998888999999987
Q ss_pred CCeE-EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCc
Q psy950 108 GGNR-QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC 184 (407)
Q Consensus 108 G~~~-~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C 184 (407)
.... ..+......|.++++.+ ..+|.+....+.|...+... + .....+.. ...|.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-~--~~~~~~~~-~~~~~~~---------------- 259 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-K--LEIRKTDK-IGLPRGL---------------- 259 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-T--EEEEECCC-CSEEEEE----------------
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-C--cEEEEecC-CCCceEE----------------
Confidence 6544 44445566889999975 67989988888888888664 2 11111110 0011111
Q ss_pred cCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcc
Q psy950 185 FRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTN 264 (407)
Q Consensus 185 ~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~ 264 (407)
++. |.+ ..-+.+....+.. . .....|....+.... ....+.....
T Consensus 260 -----------~~~-~~g----~~l~~~~~~~~~~-~---------------~~dg~i~~~d~~~~~---~~~~~~~~~~ 304 (433)
T 3bws_A 260 -----------LLS-KDG----KELYIAQFSASNQ-E---------------SGGGRLGIYSMDKEK---LIDTIGPPGN 304 (433)
T ss_dssp -----------EEC-TTS----SEEEEEEEESCTT-C---------------SCCEEEEEEETTTTE---EEEEEEEEEC
T ss_pred -----------EEc-CCC----CEEEEEECCCCcc-c---------------cCCCeEEEEECCCCc---EEeeccCCCC
Confidence 110 000 0000000000000 0 011223333332211 1111111234
Q ss_pred eEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCC-------------CCeE
Q psy950 265 VVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRP-------------WAKI 329 (407)
Q Consensus 265 ~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~-------------~~~I 329 (407)
+.++.+++.++.+|++.... +.|...++++..... .....+.++++++.++.||.+.... .+.|
T Consensus 305 ~~~~~~~~~g~~l~~~~~~~-~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v 383 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMCC-SKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKV 383 (433)
T ss_dssp EEEEEECSSTTEEEEEETTT-TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEE
T ss_pred cceEEECCCCCEEEEEecCC-CEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEE
Confidence 67889999999999998888 889999988655433 3333789999999999999998764 0389
Q ss_pred EEEECCCCcc--cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 330 AWIPTTNPSS--ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 330 ~v~~~~~~~r--l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
.+.++..... .......|.+++++|...+||.+..
T Consensus 384 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 384 YVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEET
T ss_pred EEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEEC
Confidence 9999876643 3334568999999998888887764
No 92
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.63 E-value=8.5e-09 Score=70.72 Aligned_cols=41 Identities=34% Similarity=0.810 Sum_probs=35.3
Q ss_pred ccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccce
Q psy950 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDE 232 (407)
Q Consensus 184 C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~ 232 (407)
|.. +|++|+|+|+++++ +|+|.|+.||.|.+|+++|.+.++
T Consensus 1 C~~-~ng~C~~~C~n~~g-------s~~C~C~~Gy~L~~d~~tC~dide 41 (51)
T 1kig_L 1 CSL-DNGGCDQFCREERS-------EVRCSCAHGYVLGDDSKSCVSTER 41 (51)
T ss_dssp CCT-TTTSSSSCCCEETT-------EECCCCCTTEEECTTSSCEEECSS
T ss_pred CCC-CCCCcCCEeEcCCC-------CeEEeCCCCcEECCCCCccccCCc
Confidence 444 78999999999887 699999999999999999986444
No 93
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.63 E-value=1.7e-05 Score=75.60 Aligned_cols=234 Identities=11% Similarity=0.087 Sum_probs=153.0
Q ss_pred EEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCC-------CceeEEE---eCCCCeEEE-Ee
Q psy950 27 LKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS-------MPRDLTI---DMQTHDVYW-VD 95 (407)
Q Consensus 27 l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~-------~P~glai---D~~~~~lYw-~d 95 (407)
.+...---|.+++.|+.++.+|.+++.. .+|.+.+.++...+.+.-.++. .|.||.+ |+. ++|+. ++
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~-g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~ 84 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYK-GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMK 84 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTT-TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEE
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccC-CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEc
Confidence 3444445699999999999999999876 4999999996655555323322 4789999 786 88887 55
Q ss_pred C------------CCCeEEEEecC----CCeEEEEc------c-------CCCCceEEEEeC-CEEEEEeCCC-CeEEEE
Q psy950 96 A------------KLDLIQKISYN----GGNRQIIR------R-------NLPNPMGIAVHK-SDVYWVDRNL-RTVYKA 144 (407)
Q Consensus 96 ~------------~~~~I~~~~~d----G~~~~~~~------~-------~~~~P~~lav~~-~~lYwtd~~~-~~I~~~ 144 (407)
. +...+.+.+++ |.....+- + ....|.+|+++. +.+|.++... +.|.|+
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 2 35779999998 44333221 1 223588999998 8999999988 899999
Q ss_pred ecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCC
Q psy950 145 SKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDP 224 (407)
Q Consensus 145 ~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~ 224 (407)
+.++ + ....+ +. ..|. ....
T Consensus 165 ~pdG--~--~~~~~------------~~--~~~~-~~~~----------------------------------------- 184 (334)
T 2p9w_A 165 SADG--K--TVSTF------------AW--ESGN-GGQR----------------------------------------- 184 (334)
T ss_dssp CTTS--C--CEEEE------------EE--CCCC-SSSC-----------------------------------------
T ss_pred eCCC--C--EEeee------------ee--cCCC-cccc-----------------------------------------
Confidence 9886 1 11111 10 1010 0000
Q ss_pred CcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcc--cc-c
Q psy950 225 KKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--AS-S 301 (407)
Q Consensus 225 ~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~--~~-~ 301 (407)
..+.+|.|++.++.|+..+. . +++.++++..+.. .. .
T Consensus 185 --------------------------------------~G~nGIv~~pdg~~Liv~~~-~-g~L~~fD~~~pv~~~v~~~ 224 (334)
T 2p9w_A 185 --------------------------------------PGYSGITFDPHSNKLIAFGG-P-RALTAFDVSKPYAWPEPVK 224 (334)
T ss_dssp --------------------------------------CSCSEEEEETTTTEEEEESS-S-SSEEEEECSSSSCCCEECE
T ss_pred --------------------------------------cCcceEEEeCCCCEEEEEcC-C-CeEEEEcCCCCcceeeccc
Confidence 00124566666666666666 4 5666666654322 11 1
Q ss_pred ------CCCCccEE-EEeccCCeEEEEeCCCCCeEEEEECCCCcc--cc----cCCCceeEEEEc-----CCCCeEEEEe
Q psy950 302 ------NLTNVVGV-EFDYADDKILFTQIRPWAKIAWIPTTNPSS--AS----SNLTNVVGVEFD-----YADDKILFTQ 363 (407)
Q Consensus 302 ------~~~~~~gl-AvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l~----~~l~~P~~iavd-----p~~g~lywtd 363 (407)
....+.|| +++--++.||.++... +.+.+.+.|+... .. ..+. ++|++++ ...+.+|-.+
T Consensus 225 ~~G~~~~~~~~dgilp~~~~G~vllV~~~~~-~~~~l~S~DgW~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~ 302 (334)
T 2p9w_A 225 INGDFGTLSGTEKIVTVPVGNESVLVGARAP-YAISFRSWDNWKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVS 302 (334)
T ss_dssp ESSCCCCCTTEEEEEEEEETTEEEEEEEETT-EEEEEECSSTTSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEE
T ss_pred ccCCcccccCcccccccccCCEEEEEEcCCC-CEEEEECCCCcceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEe
Confidence 11268885 7787777779999988 7777778888542 11 2333 8899988 6789999998
Q ss_pred C
Q psy950 364 I 364 (407)
Q Consensus 364 ~ 364 (407)
-
T Consensus 303 ~ 303 (334)
T 2p9w_A 303 A 303 (334)
T ss_dssp C
T ss_pred e
Confidence 3
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.62 E-value=6.6e-05 Score=72.23 Aligned_cols=114 Identities=12% Similarity=0.077 Sum_probs=76.1
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCC--CCCeEEEEeCCCCCceeEEEeCCCCeEE--EEe-------C---
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLD--GSKWTSIVSNGISMPRDLTIDMQTHDVY--WVD-------A--- 96 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~d--G~~~~~l~~~~~~~P~glaiD~~~~~lY--w~d-------~--- 96 (407)
....|..++++|..++||.++.+ .|...+++ |.-....-......|..+++++.+++|| .++ .
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 45689999999999999999876 56666664 4322221111123588999999887544 443 1
Q ss_pred --CCCeEEEEecC--CCeEEEEc----cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecC
Q psy950 97 --KLDLIQKISYN--GGNRQIIR----RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 97 --~~~~I~~~~~d--G~~~~~~~----~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~ 147 (407)
..+.+...+++ |.-...+. ....+|.++++.+ .+||.++...+.|...+..
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEEC
Confidence 45666666664 54433322 2467899999976 4799999877888777765
No 95
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.62 E-value=1.4e-08 Score=70.76 Aligned_cols=42 Identities=31% Similarity=0.661 Sum_probs=37.2
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccc
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMD 231 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~ 231 (407)
++|.. ++++|+|+|+++++ +|+|.|+.||.|..|+++|.+.+
T Consensus 2 dEC~~-~~~~C~~~C~nt~G-------sy~C~C~~Gy~L~~d~~~C~did 43 (55)
T 2jkh_L 2 KLCSL-DNGDCDQFCHEEQN-------SVVCSCARGYTLADNGKACIPTG 43 (55)
T ss_dssp CCTTT-GGGGCSSEEEEETT-------EEEEECCTTEEECTTSSCEEESS
T ss_pred ccccC-CCCCcCcEeEcCCC-------CeEEeCCCCCEECCCCCeeccCc
Confidence 67877 78999999999987 69999999999999999998543
No 96
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.62 E-value=4.9e-05 Score=71.65 Aligned_cols=115 Identities=14% Similarity=0.144 Sum_probs=85.7
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCC---CCeEEEEeCCCCCeEEEEeC--CCCCceeEEEeCCCCeEEEEeCC------CC
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQ---YPRIGKSYLDGSKWTSIVSN--GISMPRDLTIDMQTHDVYWVDAK------LD 99 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~---~~~I~r~~~dG~~~~~l~~~--~~~~P~glaiD~~~~~lYw~d~~------~~ 99 (407)
....|.+|++||. |.||+++... ...|.+.+.++...+.++.. ....|.++++|+. +++|+++.. ..
T Consensus 85 ~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 85 HKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp SSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCE
T ss_pred CCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCc
Confidence 3467999999987 6788887654 13899999998877655431 2347999999995 689998875 46
Q ss_pred eEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecC
Q psy950 100 LIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 100 ~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~ 147 (407)
.|.+++.++...+.+......|.++++.. +.||+++...+.|.+.+..
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred eEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 79999888766555545566799999976 3699998777777776654
No 97
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.59 E-value=1.3e-05 Score=75.31 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=83.6
Q ss_pred CCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe--C--CCCCceeEEEeCCCCeEEEEeCC--------
Q psy950 30 SFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS--N--GISMPRDLTIDMQTHDVYWVDAK-------- 97 (407)
Q Consensus 30 ~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~--~--~~~~P~glaiD~~~~~lYw~d~~-------- 97 (407)
.....|.++++|+. |.||+++.+.. +|.+.+.+|+ .+.+.. . .+..|+++++|+ .++||++|..
T Consensus 83 ~~~~~~~gl~~d~d-G~l~v~~~~~~-~v~~~~~~g~-~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 83 DATAFTNGNAVDAQ-QRLVHCEHGRR-AITRSDADGQ-AHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp ESCSCEEEEEECTT-SCEEEEETTTT-EEEEECTTSC-EEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGG
T ss_pred CCCCccceeeECCC-CCEEEEECCCC-EEEEECCCCC-EEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCcccccc
Confidence 34456999999997 77999988754 8999999976 444432 1 135699999998 5689998741
Q ss_pred ---------CCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCC-----CeEEEEecCC
Q psy950 98 ---------LDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNL-----RTVYKASKLA 148 (407)
Q Consensus 98 ---------~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~-----~~I~~~~~~~ 148 (407)
.+.|.+++.++...+.+. .+..|.|+++.. ..||+++... +.|.+.+...
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred ccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 357899888544443334 678999999976 4799999874 6777776654
No 98
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.56 E-value=5.1e-06 Score=76.70 Aligned_cols=65 Identities=12% Similarity=0.195 Sum_probs=52.8
Q ss_pred eeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-EEEccCCCCceE--EEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 80 RDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QIIRRNLPNPMG--IAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~~~~~~~~P~~--lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
.||+++ +++||.+....++|..+++..... +.+. ...+|| |++.+++||...|..+.+...+..+
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l--~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMER--LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEE--CTTCCEEEEEECSSCEEEEESSSCEEEEEETTT
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEEC--CCCcceeEEEEeCCEEEEEEccCCEEEEEECCc
Confidence 699998 589999999999999999975443 3332 345665 9999999999999999999988765
No 99
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.55 E-value=0.00024 Score=73.20 Aligned_cols=321 Identities=11% Similarity=0.010 Sum_probs=181.4
Q ss_pred eeeeecCCcceEEEcCCC-CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCC-CCCe-EEEEeCCCCCceeEEEe----CC
Q psy950 15 RLALRLLKKKKKLKTSFR-SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLD-GSKW-TSIVSNGISMPRDLTID----MQ 87 (407)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~-~~P~~iavdp~~g~lywtd~~~~~~I~r~~~d-G~~~-~~l~~~~~~~P~glaiD----~~ 87 (407)
.+..+|....+++-.-.. ..|.+++++|..+++|.++.. ..|...++. ++.. ..-+..+ ..|.+|+++ +.
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~d--g~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pD 254 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRD--GKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWE 254 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT--SEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCT
T ss_pred eEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCC--CeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCC
Confidence 456666665544432222 368999999999999998753 489999995 2222 1122223 369999999 68
Q ss_pred CCeEEEEeCCCCeEEEEecCCCeE-EEEc-cC----------CCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCc
Q psy950 88 THDVYWVDAKLDLIQKISYNGGNR-QIIR-RN----------LPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNIT 153 (407)
Q Consensus 88 ~~~lYw~d~~~~~I~~~~~dG~~~-~~~~-~~----------~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~ 153 (407)
+++||.++...++|..++...... +++. .. ...+.+|.... ..+|++-...+.|..++... . .
T Consensus 255 Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~-~--~ 331 (567)
T 1qks_A 255 DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD-L--N 331 (567)
T ss_dssp TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC-S--S
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC-C--c
Confidence 999999999999999988654333 3332 11 01233555433 45666666777777777553 1 1
Q ss_pred ccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccccee
Q psy950 154 LPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEY 233 (407)
Q Consensus 154 ~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~ 233 (407)
.. .+-.... +..+ . +..+.+|++ +
T Consensus 332 ~~-------------~v~~i~~----~~~~---------------------------~-----d~~~~pdgr-------~ 355 (567)
T 1qks_A 332 NL-------------KTTEISA----ERFL---------------------------H-----DGGLDGSHR-------Y 355 (567)
T ss_dssp EE-------------EEEEEEC----CSSE---------------------------E-----EEEECTTSC-------E
T ss_pred cc-------------eeeeeec----cccc---------------------------c-----CceECCCCC-------E
Confidence 11 1110000 0000 0 011233333 2
Q ss_pred eeeec--ccceEEeecCCCCCeeeeEee-cCCcce-EEEE-EEcCCCEEEEEEe-cCCceEEEEeCCCCc-------ccc
Q psy950 234 LVFST--RTEIRALHLDPTLTAVPFKTV-SNLTNV-VGVE-FDYADDKILFTQI-RPWAKIAWIPTTNPS-------SAS 300 (407)
Q Consensus 234 Ll~s~--~~~I~~i~l~~~~~~~~~~~~-~~~~~~-~ald-~d~~~~~lywsd~-~~~~~I~~~~~~~~~-------~~~ 300 (407)
++.+. .+.|.-+.+..... ....++ ....++ .+.. +++..+.+|.+.. .. +.|..++.+... .+.
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl-~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~-~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD-DSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEE-EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS-SEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEeCCCCeEEEEECCCCcE-EEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC-CeEEEecCCCCCCccccCEEEE
Confidence 33332 23444444433211 111122 111111 1222 5777788876654 44 689999887622 111
Q ss_pred ---cCCCCccEEEEeccCCeEEEEeCCC-----CCeEEEEECCCC-----c----cc--c------cCCCceeEEEEcCC
Q psy950 301 ---SNLTNVVGVEFDYADDKILFTQIRP-----WAKIAWIPTTNP-----S----SA--S------SNLTNVVGVEFDYA 355 (407)
Q Consensus 301 ---~~~~~~~glAvDwi~~~LYwtd~~~-----~~~I~v~~~~~~-----~----rl--~------~~l~~P~~iavdp~ 355 (407)
..+..+..|++.+-+++||..+... .++|.|++++.. . .+ . +.-.+|..+++.|.
T Consensus 434 ~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD 513 (567)
T ss_dssp EEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred EEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence 2232456688999999999877422 148999987654 2 22 1 13468999999999
Q ss_pred CCeEEEEeCC---CCCcccccCCCCCCCcceeEEE---eCCCccceeeccch
Q psy950 356 DDKILFTQIR---PWAKIAWIPTTNPSSASVNTIL---SRGKDEKAKIENEQ 401 (407)
Q Consensus 356 ~g~lywtd~~---~~~~ia~~dg~~~~~~~~~~l~---~~~~~~~~~~~~~~ 401 (407)
..++|.+.|. ....|.-+|-.. +..++.|. +..+++|+-..|++
T Consensus 514 G~~~~~s~~~~~~~~~~i~v~D~~t--~~~~~~i~~~~~~~P~g~f~~~~~~ 563 (567)
T 1qks_A 514 GTEVWFSVWNGKDQESALVVVDDKT--LELKHVIKDERLVTPTGKFNVYNTM 563 (567)
T ss_dssp SSEEEEEEECCTTSCCEEEEEETTT--TEEEEEECCTTCCSEEEEEEHHHHH
T ss_pred CCEEEEEeecCCCCCCcEEEEECCC--ceEEEEeCCCcccCCCeeeeeeecc
Confidence 9999999995 245563344322 22333444 45557777777765
No 100
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.52 E-value=0.0008 Score=65.39 Aligned_cols=268 Identities=11% Similarity=0.011 Sum_probs=144.6
Q ss_pred eCCCCEEEEEEc-CCCC--eEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC---------CCCeEEEEecCC
Q psy950 41 SPLPRLLYWIDY-GQYP--RIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA---------KLDLIQKISYNG 108 (407)
Q Consensus 41 dp~~g~lywtd~-~~~~--~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~---------~~~~I~~~~~dG 108 (407)
.|..+++|.+|. +... .|.+.+.+......-+..+ ..| +|++.+.+++||+++. ..+.|..++...
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356688999987 4321 6677776533222223333 368 9999999999999985 357788988864
Q ss_pred CeE-EEEc-c------CCCCceEEEEe--CCEEEEEeCC-CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCC
Q psy950 109 GNR-QIIR-R------NLPNPMGIAVH--KSDVYWVDRN-LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQP 177 (407)
Q Consensus 109 ~~~-~~~~-~------~~~~P~~lav~--~~~lYwtd~~-~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp 177 (407)
... ..+. . ....|.++++. +.+||.+... .+.|..++ .+ ++ ++..-+..
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t-~~-----~~~~~i~~------------- 166 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG-GS-----SDDQLLSS------------- 166 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC-CC-----EEeEEcCC-------------
Confidence 332 2222 1 13579999985 4799999875 57888888 65 21 11100000
Q ss_pred CCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceEEeecCCCCCeeee
Q psy950 178 PDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIRALHLDPTLTAVPF 256 (407)
Q Consensus 178 ~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~~i~l~~~~~~~~~ 256 (407)
++|-++. +.+ ...|.-.|+.|.. +.+.. ...+..+... +.
T Consensus 167 ------------~~~~~~~---~~~----~~~~~~~~~dg~~--------------~~vd~~g~~~~~~~~~------~~ 207 (373)
T 2mad_H 167 ------------PTCYHIH---PGA----PSTFYLLCAQGGL--------------AKTDHAGGAAGAGLVG------AM 207 (373)
T ss_pred ------------CceEEEE---eCC----CceEEEEcCCCCE--------------EEEECCCcEEEEEecc------cc
Confidence 2232211 110 0134455555432 11111 1111011000 00
Q ss_pred EeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc------------cCCCCccE---EEEeccCCeEEEE
Q psy950 257 KTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS------------SNLTNVVG---VEFDYADDKILFT 321 (407)
Q Consensus 257 ~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~------------~~~~~~~g---lAvDwi~~~LYwt 321 (407)
. .....-.....|...++.+||... . +.++.+++.+..... ..+..|.| ++++.-++.||.+
T Consensus 208 ~-~~~~p~~~~~~~~~~~~~~~~~~~-~-~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 208 L-TAAQNLLTQPAQANKSGRIVWPVY-S-GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred c-cCCcceeecceeEecCCEEEEEcC-C-ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEE
Confidence 0 000000111234445566666553 3 456666665432110 11113455 9999999999998
Q ss_pred eCC---------CCCeEEEEECCCCcccc--cCCCceeEEEEcCCCC-eEEEEeCCCCCcccccC
Q psy950 322 QIR---------PWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADD-KILFTQIRPWAKIAWIP 374 (407)
Q Consensus 322 d~~---------~~~~I~v~~~~~~~rl~--~~l~~P~~iavdp~~g-~lywtd~~~~~~ia~~d 374 (407)
... . ++|.++++.....+. .--..|.+|++.|-.. +||-+++++ ..+.-+|
T Consensus 285 ~~~~~~~~~~~~~-~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~-~~V~ViD 347 (373)
T 2mad_H 285 TSEQSAWKLHAAA-KEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGT-EVLHIYD 347 (373)
T ss_pred eccCCcccccCCC-CeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCC-CeEEEEE
Confidence 642 2 579999998765422 2224799999999877 666666644 3344444
No 101
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.52 E-value=5.8e-05 Score=70.02 Aligned_cols=112 Identities=12% Similarity=0.053 Sum_probs=82.5
Q ss_pred CCcceEEEeCCCCEEEEEEcC-CCCeEEEEeCCCCCeEEEEe-CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCe
Q psy950 33 SANTTSPFSPLPRLLYWIDYG-QYPRIGKSYLDGSKWTSIVS-NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN 110 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~-~~~~I~r~~~dG~~~~~l~~-~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~ 110 (407)
..|.||++++. |.||.+... ...+|.+.++.......-+. .....+.|++++ +++||++++..+.+.+++.+-..
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 35799999987 899999742 23599999997444333232 233356788887 68999999999999999987443
Q ss_pred E-EEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 111 R-QIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 111 ~-~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
. ..+......+.||+.++++||.++ .++.|..++..+
T Consensus 98 v~~~i~~g~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t 135 (266)
T 2iwa_A 98 NIKNFTHQMKDGWGLATDGKILYGSD-GTSILYEIDPHT 135 (266)
T ss_dssp EEEEEECCSSSCCEEEECSSSEEEEC-SSSEEEEECTTT
T ss_pred EEEEEECCCCCeEEEEECCCEEEEEC-CCCeEEEEECCC
Confidence 3 333211367788898999999999 578999888765
No 102
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.50 E-value=0.00011 Score=70.82 Aligned_cols=251 Identities=14% Similarity=0.156 Sum_probs=145.1
Q ss_pred EEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc-------cCCCCceEEEEeC-----CEEEEEe--C
Q psy950 71 IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR-------RNLPNPMGIAVHK-----SDVYWVD--R 136 (407)
Q Consensus 71 l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~-------~~~~~P~~lav~~-----~~lYwtd--~ 136 (407)
++.+++..|.+|++++. ++||+++...++|.+++.++.....+. .....|.||+++. +.||++. .
T Consensus 26 ~va~gL~~P~~ia~~pd-G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLPG-GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcCC-CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 45568999999999985 679999988999999987644443221 3456799999974 7788754 4
Q ss_pred CCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCC
Q psy950 137 NLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCAT 216 (407)
Q Consensus 137 ~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~ 216 (407)
..++|.|..... +... . ..+..+. .|+.. .|. . + ++.-..|.+. |.
T Consensus 105 ~~~~v~R~~~~~-~~~~-~----~~~~~~~--~i~~~--~p~-~---~----~H~g~~l~fg----------------pD 150 (347)
T 3das_A 105 SDNRIVRMLYDE-KKPS-G----EQLGAPD--TVFRG--IPK-G---V----IHNGGRIAFG----------------PD 150 (347)
T ss_dssp SSEEEEEEEBCT-TSCT-T----CCBCCCE--EEEEE--ECC-C---S----SCCCCCEEEC----------------TT
T ss_pred CCCEEEEEEeCC-CCcc-c----ccCCCcE--EEEEc--CCC-C---C----CccCccccCC----------------CC
Confidence 556888887664 1100 0 0001111 11111 011 0 0 0111111111 11
Q ss_pred Ccccc---CCCCcccccceeeeeecccceEEeecCCCC-Ceee----eEeecCCcceEEEEEEcCCCEEEEEEecC--Cc
Q psy950 217 GTPSA---SDPKKCTTMDEYLVFSTRTEIRALHLDPTL-TAVP----FKTVSNLTNVVGVEFDYADDKILFTQIRP--WA 286 (407)
Q Consensus 217 G~~l~---~d~~~C~~~~~~Ll~s~~~~I~~i~l~~~~-~~~~----~~~~~~~~~~~ald~d~~~~~lywsd~~~--~~ 286 (407)
|+..- ..+..|...+. -.....|.++..+... ..+| .....+++++.++++|+ .+.||.+|... ..
T Consensus 151 G~Lyvt~Gd~~~~~~~qd~---~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~d 226 (347)
T 3das_A 151 KMLYAGTGESGDTGLSQDR---KSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWD 226 (347)
T ss_dssp SCEEEECBCTTCGGGTTCT---TCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECT-TCCEEEEECCSSSCE
T ss_pred CCEEEEECCCCCCccccCC---CCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECC-CCCEEEEecCCCCCc
Confidence 11100 00111211000 0234577778766431 1111 12345789999999999 68999999754 14
Q ss_pred eEEEEeCCCCc-------------ccc-----cCC-CCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc------ccc
Q psy950 287 KIAWIPTTNPS-------------SAS-----SNL-TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS------SAS 341 (407)
Q Consensus 287 ~I~~~~~~~~~-------------~~~-----~~~-~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~------rl~ 341 (407)
.|.++.-.+.- ... .-. ..|.||++. .+.+|...-.. .+|.++.+++.. .++
T Consensus 227 eln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~-~~l~~v~~~~~~~~~~~e~~l 303 (347)
T 3das_A 227 ELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRG-ERLWRIPLKGTAAAADPQAFL 303 (347)
T ss_dssp EEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTT-CSEEEEEEETTEESSCCEEES
T ss_pred eeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE--cCceeeccccC-CEEEEEEecCCceecceEEee
Confidence 56665422110 000 111 267899997 78999998887 689998887542 234
Q ss_pred c-CCCceeEEEEcCCCCeEEEEeC
Q psy950 342 S-NLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 342 ~-~l~~P~~iavdp~~g~lywtd~ 364 (407)
+ ...+|++|+++| .|.||.++.
T Consensus 304 ~~~~gR~~dv~~~p-DG~lyv~td 326 (347)
T 3das_A 304 EGEYGRLRTVAPAG-GDKLWLVTS 326 (347)
T ss_dssp TTTSSCEEEEEEEE-TTEEEEEEC
T ss_pred cCCCCCccEEEECC-CCcEEEEEc
Confidence 4 357999999999 689999864
No 103
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.49 E-value=0.00011 Score=75.24 Aligned_cols=267 Identities=8% Similarity=-0.031 Sum_probs=153.1
Q ss_pred EEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC---CCeEEEEc
Q psy950 39 PFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN---GGNRQIIR 115 (407)
Q Consensus 39 avdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d---G~~~~~~~ 115 (407)
++||. +++|.+..... .|...+.+.......+..+. .|.++++++.+++||.++.. +.|..++++ +.....+
T Consensus 144 ~~~p~-~~~~vs~~~d~-~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i- 218 (543)
T 1nir_A 144 DLDLP-NLFSVTLRDAG-QIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEI- 218 (543)
T ss_dssp CCCGG-GEEEEEEGGGT-EEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEE-
T ss_pred ccCCC-CEEEEEEcCCC-eEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEE-
Confidence 47775 78999988764 88887766444433444344 38999999999999999987 999999994 2222233
Q ss_pred cCCCCceEEEEeC------CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCc
Q psy950 116 RNLPNPMGIAVHK------SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGN 189 (407)
Q Consensus 116 ~~~~~P~~lav~~------~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~n 189 (407)
.....|+++++.. .+||.++...+.|...+..+ + .....+... ....+-.-||+.
T Consensus 219 ~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-~--~~~~~i~~~-g~~~~~~~~~~~--------------- 279 (543)
T 1nir_A 219 KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-L--EPKQIVSTR-GMTVDTQTYHPE--------------- 279 (543)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-C--CEEEEEECC-EECSSSCCEESC---------------
T ss_pred ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-c--ccceeeccc-CcccCccccccC---------------
Confidence 3466899999963 58888876667777666543 1 112222100 000000000000
Q ss_pred ccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEeecCCcceEE
Q psy950 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTVSNLTNVVG 267 (407)
Q Consensus 190 g~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~~~~~~~~a 267 (407)
.....+.+ .+++. +++++. ...|.-+.+..... ..+..+.....+..
T Consensus 280 ~~v~~i~~-----------------------s~~~~-------~~~vs~~~~g~i~vvd~~~~~~-l~~~~i~~~~~~~~ 328 (543)
T 1nir_A 280 PRVAAIIA-----------------------SHEHP-------EFIVNVKETGKVLLVNYKDIDN-LTVTSIGAAPFLHD 328 (543)
T ss_dssp CCEEEEEE-----------------------CSSSS-------EEEEEETTTTEEEEEECTTSSS-CEEEEEECCSSCCC
T ss_pred CceEEEEE-----------------------CCCCC-------EEEEEECCCCeEEEEEecCCCc-ceeEEeccCcCccC
Confidence 00011111 11111 111111 12333344332211 11112223345677
Q ss_pred EEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCc---cEEEE-eccCCeEEEEeC-CCCCeEEEEECCC----
Q psy950 268 VEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNV---VGVEF-DYADDKILFTQI-RPWAKIAWIPTTN---- 336 (407)
Q Consensus 268 ld~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~---~glAv-Dwi~~~LYwtd~-~~~~~I~v~~~~~---- 336 (407)
+.|++.++++|.+.... ++|..+++....... ..+..| .|.++ ++-.+.+|.+.. +. ++|.+++.+.
T Consensus 329 ~~~spdg~~l~va~~~~-~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d-~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 329 GGWDSSHRYFMTAANNS-NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD-GSISLIGTDPKNHP 406 (543)
T ss_dssp EEECTTSCEEEEEEGGG-TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS-SEEEEEECCTTTCT
T ss_pred ceECCCCCEEEEEecCC-CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC-ceEEEEEeCCCCCc
Confidence 88999999999998877 789999987665433 222122 35554 566688888876 45 7999999876
Q ss_pred ---Cccc--cc-CCCceeEEEEcCCCCeEEEE
Q psy950 337 ---PSSA--SS-NLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 337 ---~~rl--~~-~l~~P~~iavdp~~g~lywt 362 (407)
...+ .. .-..+..|+.+|...+||-.
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCEEEEC
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEe
Confidence 2221 12 22456789999976666543
No 104
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.42 E-value=0.00096 Score=68.62 Aligned_cols=282 Identities=7% Similarity=-0.072 Sum_probs=161.5
Q ss_pred EeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC---CCeEEEEcc
Q psy950 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN---GGNRQIIRR 116 (407)
Q Consensus 40 vdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d---G~~~~~~~~ 116 (407)
.|| .+++|.++.+.. .|...+.+......-+..+ ..|+++++++.+++||.++. .+.|..+++. +.....+ .
T Consensus 163 ~d~-~~~~~V~~~~~~-~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i-~ 237 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAG-QIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEI-K 237 (567)
T ss_dssp CCG-GGEEEEEETTTT-EEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEE-E
T ss_pred cCC-CceEEEEeCCCC-eEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEE-e
Confidence 555 478999988765 8888888755444334433 37999999999999999974 6799999994 3222222 3
Q ss_pred CCCCceEEEEe------CCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcc
Q psy950 117 NLPNPMGIAVH------KSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNG 190 (407)
Q Consensus 117 ~~~~P~~lav~------~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng 190 (407)
....|.++++. +.++|.++...+.|..++..+ .+....+... ..+.+-.-||+. |
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t---~~~~~~i~~~-~~~~~~~~~~p~--~------------- 298 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET---LEPKKIQSTR-GMTYDEQEYHPE--P------------- 298 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT---CCEEEEEECC-EECTTTCCEESC--C-------------
T ss_pred cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC---CcEEEEEecc-ccccccccccCC--C-------------
Confidence 45689999998 368999988888888777544 1112211100 000000000000 0
Q ss_pred cccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeee--cccceEEeecCCCCCeeeeEeecCCcceEEE
Q psy950 191 GCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFS--TRTEIRALHLDPTLTAVPFKTVSNLTNVVGV 268 (407)
Q Consensus 191 ~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~~~~~al 268 (407)
....+ ....++ + .++++ ....|..+...+.. ...+..+.....+..+
T Consensus 299 rva~i-----------------------~~s~~~-----~--~~vv~~~~~g~v~~vd~~~~~-~~~v~~i~~~~~~~d~ 347 (567)
T 1qks_A 299 RVAAI-----------------------LASHYR-----P--EFIVNVKETGKILLVDYTDLN-NLKTTEISAERFLHDG 347 (567)
T ss_dssp CEEEE-----------------------EECSSS-----S--EEEEEETTTTEEEEEETTCSS-EEEEEEEECCSSEEEE
T ss_pred ceEEE-----------------------EEcCCC-----C--EEEEEecCCCeEEEEecCCCc-cceeeeeeccccccCc
Confidence 00000 000111 0 01111 11233333332211 1122233344567788
Q ss_pred EEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cC-CCCc---cEEE-EeccCCeEEEEeC-CCCCeEEEEECCCCc--
Q psy950 269 EFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SN-LTNV---VGVE-FDYADDKILFTQI-RPWAKIAWIPTTNPS-- 338 (407)
Q Consensus 269 d~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~-~~~~---~glA-vDwi~~~LYwtd~-~~~~~I~v~~~~~~~-- 338 (407)
.+++.++++|.++... ++|..+++....... .+ +..| .|.. +++-.+.+|.|.. +. ++|.+++.+...
T Consensus 348 ~~~pdgr~~~va~~~s-n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~-~~Vsvid~~~~~~~ 425 (567)
T 1qks_A 348 GLDGSHRYFITAANAR-NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD-DSVALIGTDPEGHP 425 (567)
T ss_dssp EECTTSCEEEEEEGGG-TEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS-SEEEEEECCTTTCT
T ss_pred eECCCCCEEEEEeCCC-CeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC-CeEEEecCCCCCCc
Confidence 8999999999999888 889999988765433 44 3233 3666 4666778877765 44 789999987621
Q ss_pred -----ccc--c-CCCceeEEEEcCCCCeEEEEeCCCC-----CcccccCCCCC
Q psy950 339 -----SAS--S-NLTNVVGVEFDYADDKILFTQIRPW-----AKIAWIPTTNP 378 (407)
Q Consensus 339 -----rl~--~-~l~~P~~iavdp~~g~lywtd~~~~-----~~ia~~dg~~~ 378 (407)
.+. . .-..+-.|.++|...+||...-..+ ..|+-+|-.++
T Consensus 426 ~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 426 DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred cccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 111 1 1133456889998777765542221 24455555544
No 105
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=0.00016 Score=66.02 Aligned_cols=68 Identities=12% Similarity=0.094 Sum_probs=51.9
Q ss_pred CceeEEEeCCCCeEEEEeCCC--CeEEEEecCCCeE-EEEccCCCCc--eEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 78 MPRDLTIDMQTHDVYWVDAKL--DLIQKISYNGGNR-QIIRRNLPNP--MGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 78 ~P~glaiD~~~~~lYw~d~~~--~~I~~~~~dG~~~-~~~~~~~~~P--~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
.-.||++|. ++||.+.... ..|..+++..... +.+ .-...+ .||++.+++||..+|.++.++..+..+
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCc
Confidence 456999996 8999997654 6899999975544 332 222344 567889999999999999999998765
No 106
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.37 E-value=8.3e-06 Score=81.76 Aligned_cols=146 Identities=12% Similarity=0.137 Sum_probs=102.1
Q ss_pred cceEEEcCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCC-CCCeEEEEe--C------CCCCceeEEEeCC---CCe
Q psy950 23 KKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLD-GSKWTSIVS--N------GISMPRDLTIDMQ---THD 90 (407)
Q Consensus 23 ~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~d-G~~~~~l~~--~------~~~~P~glaiD~~---~~~ 90 (407)
....++..++..|++|+++|. |.||.++... .+|.+...+ |. .+.+.. . +..-+.|||+++. ++.
T Consensus 17 f~~~~~a~~l~~P~~~a~~pd-G~l~V~e~~g-g~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~ 93 (454)
T 1cru_A 17 FDKKVILSNLNKPHALLWGPD-NQIWLTERAT-GKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPY 93 (454)
T ss_dssp SCEEEEECCCSSEEEEEECTT-SCEEEEETTT-CEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCE
T ss_pred eEEEEEECCCCCceEEEEcCC-CcEEEEEcCC-CEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCE
Confidence 455667778999999999997 7899999764 379999875 44 333332 1 1234559999997 899
Q ss_pred EEEEeCC------------CCeEEEEecCCC-----eEEEEc-----cCCCCceEEEEeC-CEEEEEeCC----------
Q psy950 91 VYWVDAK------------LDLIQKISYNGG-----NRQIIR-----RNLPNPMGIAVHK-SDVYWVDRN---------- 137 (407)
Q Consensus 91 lYw~d~~------------~~~I~~~~~dG~-----~~~~~~-----~~~~~P~~lav~~-~~lYwtd~~---------- 137 (407)
||+++.. ..+|.+..+++. ..+++. .....+.+|++.. ++||++...
T Consensus 94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~ 173 (454)
T 1cru_A 94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLF 173 (454)
T ss_dssp EEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTT
T ss_pred EEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccc
Confidence 9999864 357999888642 234443 2234588999976 799999542
Q ss_pred ----------------------CCeEEEEecCCCC---CC----cccEEcccCCCCceeeEEe
Q psy950 138 ----------------------LRTVYKASKLAST---NI----TLPTPIRTGLSGLRDIAIF 171 (407)
Q Consensus 138 ----------------------~~~I~~~~~~~~g---~~----~~~~~i~~~~~~p~~i~i~ 171 (407)
.++|.|++.+++- +. ...+++..++..|.++++.
T Consensus 174 ~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~d 236 (454)
T 1cru_A 174 LPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFT 236 (454)
T ss_dssp SCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEEC
T ss_pred cccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEEC
Confidence 3579999987610 00 0346777788888888865
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.35 E-value=0.00041 Score=67.53 Aligned_cols=236 Identities=12% Similarity=0.051 Sum_probs=145.2
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEE
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQI 113 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~ 113 (407)
...+++++| .+.+|.+.... ..|...+++.......+......|.++++++.++.||.+....+.|...++.......
T Consensus 171 ~v~~~~~~~-~~~~~~s~~~d-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 171 FVETISIPE-HNELWVSQMQA-NAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEEEGG-GTEEEEEEGGG-TEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceeEEEEcC-CCEEEEEECCC-CEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 356788855 47888887765 4899999886555444444455899999999999999999888999999987655533
Q ss_pred EccCCCCceEEEEeC--CEEEEEeCC-------CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCc
Q psy950 114 IRRNLPNPMGIAVHK--SDVYWVDRN-------LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC 184 (407)
Q Consensus 114 ~~~~~~~P~~lav~~--~~lYwtd~~-------~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C 184 (407)
.......|.++++.. ..||.+... .+.|...+..+ + .....+ .+.
T Consensus 249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~--~~~~~~------------~~~----------- 302 (433)
T 3bws_A 249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-E--KLIDTI------------GPP----------- 302 (433)
T ss_dssp ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-T--EEEEEE------------EEE-----------
T ss_pred EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-C--cEEeec------------cCC-----------
Confidence 334445688899875 467766542 23444444432 1 000000 000
Q ss_pred cCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeee--cccceEEeecCCCCCeeeeEeecCC
Q psy950 185 FRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFS--TRTEIRALHLDPTLTAVPFKTVSNL 262 (407)
Q Consensus 185 ~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s--~~~~I~~i~l~~~~~~~~~~~~~~~ 262 (407)
+...++++ .+++. .++++ ....+....+.... ....+...
T Consensus 303 -----~~~~~~~~-----------------------~~~g~-------~l~~~~~~~~~v~v~d~~~~~---~~~~~~~~ 344 (433)
T 3bws_A 303 -----GNKRHIVS-----------------------GNTEN-------KIYVSDMCCSKIEVYDLKEKK---VQKSIPVF 344 (433)
T ss_dssp -----ECEEEEEE-----------------------CSSTT-------EEEEEETTTTEEEEEETTTTE---EEEEEECS
T ss_pred -----CCcceEEE-----------------------CCCCC-------EEEEEecCCCEEEEEECCCCc---EEEEecCC
Confidence 00001111 11111 12222 12234434443221 11122334
Q ss_pred cceEEEEEEcCCCEEEEEEecC-------------CceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCC
Q psy950 263 TNVVGVEFDYADDKILFTQIRP-------------WAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWA 327 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~-------------~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~ 327 (407)
..+.++++++.++.||.+.... .+.|+..++....... .....|.++++++-++.||.+.... +
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d-~ 423 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLD-H 423 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTT-T
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCC-C
Confidence 5577899999999999987653 0378889887655443 2233789999999999999998867 7
Q ss_pred eEEEEECCC
Q psy950 328 KIAWIPTTN 336 (407)
Q Consensus 328 ~I~v~~~~~ 336 (407)
+|.+.++++
T Consensus 424 ~i~v~~~~~ 432 (433)
T 3bws_A 424 QIRVYRRDG 432 (433)
T ss_dssp EEEEEEETT
T ss_pred eEEEEEecC
Confidence 898887664
No 108
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.35 E-value=0.00043 Score=63.06 Aligned_cols=108 Identities=8% Similarity=-0.070 Sum_probs=78.6
Q ss_pred cceEEEeCCCCEEEEEEcCC-CCeEEEEeCCCCCeEEEEe-CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-
Q psy950 35 NTTSPFSPLPRLLYWIDYGQ-YPRIGKSYLDGSKWTSIVS-NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR- 111 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~-~~~I~r~~~dG~~~~~l~~-~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~- 111 (407)
-.|+++|. +.||.+.... .++|.+.++.......-+. ..-....||+++ +++||.+++..+.+.++|.+....
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 47999996 8999986532 3599999997444333222 122244677776 699999999999999999875544
Q ss_pred EEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 112 QIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 112 ~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
..+.. ...+.||+.++++||.+|. +++|...+..+
T Consensus 99 ~ti~~-~~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t 133 (243)
T 3mbr_X 99 ARFRY-PGEGWALTSDDSHLYMSDG-TAVIRKLDPDT 133 (243)
T ss_dssp EEEEC-SSCCCEEEECSSCEEEECS-SSEEEEECTTT
T ss_pred EEEeC-CCCceEEeeCCCEEEEECC-CCeEEEEeCCC
Confidence 44432 3478999999999999995 77888877654
No 109
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.32 E-value=0.00014 Score=70.40 Aligned_cols=104 Identities=12% Similarity=0.108 Sum_probs=71.4
Q ss_pred CCCcceEEEeCCCCEEEEEEc-----------CCCCeEEEEeCCCC--CeEEEEeCC------CCCceeEEEeCC---CC
Q psy950 32 RSANTTSPFSPLPRLLYWIDY-----------GQYPRIGKSYLDGS--KWTSIVSNG------ISMPRDLTIDMQ---TH 89 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~-----------~~~~~I~r~~~dG~--~~~~l~~~~------~~~P~glaiD~~---~~ 89 (407)
...|..|+++| .|.+|-+.. ....+|.+.+.+.. ..+.|..++ -..|.||.+... +.
T Consensus 49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 45699999999 699999851 13468999999843 333433333 248999999763 34
Q ss_pred eEEEEeCC--CCeEEEEec--CCCeEEEEc----cCCCCceEEEEeC-CEEEEEeC
Q psy950 90 DVYWVDAK--LDLIQKISY--NGGNRQIIR----RNLPNPMGIAVHK-SDVYWVDR 136 (407)
Q Consensus 90 ~lYw~d~~--~~~I~~~~~--dG~~~~~~~----~~~~~P~~lav~~-~~lYwtd~ 136 (407)
+||+++.. ..+|+...+ ++...+.+. ..+..|-+++++. +.+|.++.
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCC
Confidence 89999987 456666555 444433332 4578899999987 78888754
No 110
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.32 E-value=0.00038 Score=64.19 Aligned_cols=105 Identities=12% Similarity=-0.002 Sum_probs=78.3
Q ss_pred ceEEEeCCCCEEEEEEcCCCCeEEEEeCC-CCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-EE
Q psy950 36 TTSPFSPLPRLLYWIDYGQYPRIGKSYLD-GSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QI 113 (407)
Q Consensus 36 ~~iavdp~~g~lywtd~~~~~~I~r~~~d-G~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~ 113 (407)
+||+++ .+.||.+.... .+|.+.++. |.-...++. .-....||+++ +++||.+++..+.+.++|.+.... ..
T Consensus 58 qGL~~~--~~~Ly~stG~~-g~v~~iD~~Tgkv~~~~l~-~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQ-GTLRQLSLESAQPVWMERL-GNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEE--TTEEEEEETTT-TEEEECCSSCSSCSEEEEC-TTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ceEEEE--CCEEEEEcCCC-CEEEEEECCCCcEEeEECC-CCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 799998 58999998764 478888887 444444432 22244677776 689999999999999999875544 34
Q ss_pred EccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 114 IRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 114 ~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
+.. ...+.||+.++++||.+| .+++|..++..+
T Consensus 132 i~~-~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T 164 (268)
T 3nok_A 132 TRY-SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDG 164 (268)
T ss_dssp EEC-SSCCCCEEEETTEEEEEC-SSSEEEEECTTT
T ss_pred EeC-CCceeEEecCCCEEEEEC-CCCEEEEEcCCC
Confidence 432 356899999999999999 477888888664
No 111
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.26 E-value=0.00014 Score=66.98 Aligned_cols=66 Identities=14% Similarity=0.035 Sum_probs=51.7
Q ss_pred eeEEEeCCCCeEEEEeCCCC--eEEEEecCCCeE-EEEccCCCCce--EEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 80 RDLTIDMQTHDVYWVDAKLD--LIQKISYNGGNR-QIIRRNLPNPM--GIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d~~~~--~I~~~~~dG~~~-~~~~~~~~~P~--~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
.||+++ +++||.+....+ .|..+++..... +.+. -...+| ||++.+++||...|..+.+...+..+
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCCccceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 799998 579999987654 899999975444 3332 234565 48999999999999999999999875
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.25 E-value=0.0012 Score=61.65 Aligned_cols=254 Identities=12% Similarity=-0.020 Sum_probs=137.6
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCC------CCCceeEEEeCCCCeEEEEeCC----------
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNG------ISMPRDLTIDMQTHDVYWVDAK---------- 97 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~------~~~P~glaiD~~~~~lYw~d~~---------- 97 (407)
.|.+++++|..+++|.+.... ..|...+++.......+... ...|.++++++.++.||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~-~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHY-GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTT-TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCC-CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccccc
Confidence 699999999988999998665 48999998755444334322 1238999999999999999854
Q ss_pred -CCeEEEEecCCCe-EE--EEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCC-CCceeeEEe
Q psy950 98 -LDLIQKISYNGGN-RQ--IIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGL-SGLRDIAIF 171 (407)
Q Consensus 98 -~~~I~~~~~dG~~-~~--~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~-~~p~~i~i~ 171 (407)
.+.|...++.... .+ ........+.++++.+ +.+|..+ +.|...+..+ +. ....+.... ..|..
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~---~~i~~~d~~~-~~--~~~~~~~~~~~~~~~---- 192 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKT-GK--YTVALPLRNWNRKGY---- 192 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTT-CC--EEEEECSTTCCCTTB----
T ss_pred CCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEcc---CcEEEEeCCC-Cc--eeccccccccCCccc----
Confidence 5789999986522 11 1112233577888865 5577753 2377777654 21 111111100 00000
Q ss_pred eecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcc--cccceeee--e-ecccceEEee
Q psy950 172 DIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKC--TTMDEYLV--F-STRTEIRALH 246 (407)
Q Consensus 172 ~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C--~~~~~~Ll--~-s~~~~I~~i~ 246 (407)
..| ....... .+.-.+.. ..|.+..+.+|+..- .....+.+ + .....+..+.
T Consensus 193 ---~~~--~~~~~~~--~~~~~~~~----------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (349)
T 1jmx_B 193 ---SAP--DVLYFWP--HQSPRHEF----------------SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 249 (349)
T ss_dssp ---CCC--BCCCCCC--CCCTTCEE----------------EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEE
T ss_pred ---cCc--cceeeec--CCCcceeE----------------EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecc
Confidence 000 0000000 00000000 000000111111000 00000111 1 0111222221
Q ss_pred cCCCCCeeeeEeecCCcceEEEEEEc-CCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeC
Q psy950 247 LDPTLTAVPFKTVSNLTNVVGVEFDY-ADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQI 323 (407)
Q Consensus 247 l~~~~~~~~~~~~~~~~~~~ald~d~-~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~ 323 (407)
+ -.....+.++.+++ .++.+|.+ . +.|..+++.+..... ..+..+.++++++-++.||.+ .
T Consensus 250 ~-----------~~~~~~~~~~~~sp~dg~~l~~~---~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~ 313 (349)
T 1jmx_B 250 F-----------ADLTELYFTGLRSPKDPNQIYGV---L-NRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG-G 313 (349)
T ss_dssp E-----------EECSSCEEEEEECSSCTTEEEEE---E-SEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE-S
T ss_pred c-----------ccCCCcceeeEecCCCCCEEEEE---c-CeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe-c
Confidence 1 11233567888999 88899888 4 679999887765433 344478999999999999986 4
Q ss_pred CCCCeEEEEECCCCc
Q psy950 324 RPWAKIAWIPTTNPS 338 (407)
Q Consensus 324 ~~~~~I~v~~~~~~~ 338 (407)
.. ++|.+.++....
T Consensus 314 ~~-~~v~v~d~~~~~ 327 (349)
T 1jmx_B 314 TF-NDLAVFNPDTLE 327 (349)
T ss_dssp BS-SEEEEEETTTTE
T ss_pred CC-CeEEEEeccccc
Confidence 44 689999887654
No 113
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.22 E-value=0.00058 Score=63.52 Aligned_cols=100 Identities=10% Similarity=0.005 Sum_probs=63.5
Q ss_pred EEEEcCCCCeEEEEeCCCCCeEEEEeCCC-C-CceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-EEEc-cC----CC
Q psy950 48 YWIDYGQYPRIGKSYLDGSKWTSIVSNGI-S-MPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QIIR-RN----LP 119 (407)
Q Consensus 48 ywtd~~~~~~I~r~~~dG~~~~~l~~~~~-~-~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~~~-~~----~~ 119 (407)
+.+.... ..|...++........+..+. . .|.++++++.+++||++....+.|..+++..... ..+. .. ..
T Consensus 4 ~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 4 ILAPARP-DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEETT-TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEcCCC-CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 3344333 366666665433332233222 1 5999999999999999999889999999875544 3332 21 12
Q ss_pred CceEEEEeC--CEEEEEeC-----------CCCeEEEEecCC
Q psy950 120 NPMGIAVHK--SDVYWVDR-----------NLRTVYKASKLA 148 (407)
Q Consensus 120 ~P~~lav~~--~~lYwtd~-----------~~~~I~~~~~~~ 148 (407)
.|.++++.. ++||+++. ..+.|...+..+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~ 124 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET 124 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCC
Confidence 788999975 58898852 235666666543
No 114
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.06 E-value=4.7e-05 Score=77.97 Aligned_cols=275 Identities=9% Similarity=0.022 Sum_probs=164.1
Q ss_pred CCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCC-CCCceeEEEe--CCCCeEEEEe-----------------CCCCeEE
Q psy950 43 LPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNG-ISMPRDLTID--MQTHDVYWVD-----------------AKLDLIQ 102 (407)
Q Consensus 43 ~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~-~~~P~glaiD--~~~~~lYw~d-----------------~~~~~I~ 102 (407)
..++||.+|..+. +|.|.+++--....+++-. ...|+|+++. +.+++||.+. ...+.+.
T Consensus 100 DG~~lfVnd~~~~-rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANT-RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTT-EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCC-EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 5789999998864 9999999987655555532 3579999984 8899999994 4455888
Q ss_pred EEecCCCeEEEEccCCCCceEEEEe--CCEEEEEeCCCCe--------------EEEEecCCCCCCcccEEcc-cCCCCc
Q psy950 103 KISYNGGNRQIIRRNLPNPMGIAVH--KSDVYWVDRNLRT--------------VYKASKLASTNITLPTPIR-TGLSGL 165 (407)
Q Consensus 103 ~~~~dG~~~~~~~~~~~~P~~lav~--~~~lYwtd~~~~~--------------I~~~~~~~~g~~~~~~~i~-~~~~~p 165 (407)
.++.+.....-.......|.++++. +.++|.|...++. |...+... ....+. ......
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~-----~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE-----IEKAIAAGDYQEL 253 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH-----HHHHHHHTCSEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccc-----eeEeccCCCeeEE
Confidence 9888865542211222389999984 5899999877643 22222110 000000 011112
Q ss_pred eeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecc--cceE
Q psy950 166 RDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR--TEIR 243 (407)
Q Consensus 166 ~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~--~~I~ 243 (407)
.++.|.+...++. ... +.. -..-.-|+|..+.+||+ +++.+.. ..+.
T Consensus 254 ~~V~VID~~~~~~---~~~----------~~~-----------Ipvg~~PhGv~~sPDGk-------~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 254 NGVKVVDGRKEAS---SLF----------TRY-----------IPIANNPHGCNMAPDKK-------HLCVAGKLSPTVT 302 (595)
T ss_dssp TTEEEEECSGGGC---CSS----------EEE-----------EEEESSCCCEEECTTSS-------EEEEECTTSSBEE
T ss_pred CcEEEEeCcccCC---cee----------EEE-----------EecCCCceEEEEcCCCC-------EEEEeCCCCCeEE
Confidence 3466666443110 000 000 01112345566667765 2222221 2333
Q ss_pred EeecCCC---------CCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCC----------Ccccc--cC
Q psy950 244 ALHLDPT---------LTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN----------PSSAS--SN 302 (407)
Q Consensus 244 ~i~l~~~---------~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~----------~~~~~--~~ 302 (407)
-+.+... ....++..+.....|..++||+.+ ++|.+.... +.|..++++. ..++. .+
T Consensus 303 Vid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ld-sqV~kwdi~~a~~~~~g~~~~~vi~kidV 380 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLD-SQVVKWNIEDAIRAYAGEKVDPIKDKLDV 380 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTT-TEEEEEEHHHHHHHHHTCSCCCEEEEEEC
T ss_pred EEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecC-CcEEEEEhhHhhhhhcccccceeEEEeec
Confidence 3333210 001223344556678999999988 999999888 8888888765 11111 33
Q ss_pred CCCc------cEEEEeccCCeEEEEeCCCCCeE-----------EEEECCCCc-ccc---cCCCceeEEEEcCCC
Q psy950 303 LTNV------VGVEFDYADDKILFTQIRPWAKI-----------AWIPTTNPS-SAS---SNLTNVVGVEFDYAD 356 (407)
Q Consensus 303 ~~~~------~glAvDwi~~~LYwtd~~~~~~I-----------~v~~~~~~~-rl~---~~l~~P~~iavdp~~ 356 (407)
+-.| .|+++.+.++.||-.+....+++ ..++..|.. .++ .....|+..+++|..
T Consensus 381 ~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~ 455 (595)
T 1fwx_A 381 HYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPS 455 (595)
T ss_dssp SSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTT
T ss_pred ccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHH
Confidence 2233 67788999999999999875566 778887654 222 236899999999854
No 115
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.05 E-value=0.002 Score=61.98 Aligned_cols=103 Identities=9% Similarity=0.038 Sum_probs=70.4
Q ss_pred CCEEEEEEcCC----CCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC---------CCCeEEEEecCCCe
Q psy950 44 PRLLYWIDYGQ----YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA---------KLDLIQKISYNGGN 110 (407)
Q Consensus 44 ~g~lywtd~~~----~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~---------~~~~I~~~~~dG~~ 110 (407)
.+++|.+|.+. ...|.+.+.+.......+..+ ..| +|++++.+++||.++. ..+.|..++.....
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 46899988652 237888876533332233333 468 9999999999999984 24579999886433
Q ss_pred E-EEEc-c-----CCCCceEEEEeC--CEEEEEeCC-CCeEEEEecCC
Q psy950 111 R-QIIR-R-----NLPNPMGIAVHK--SDVYWVDRN-LRTVYKASKLA 148 (407)
Q Consensus 111 ~-~~~~-~-----~~~~P~~lav~~--~~lYwtd~~-~~~I~~~~~~~ 148 (407)
. ..+. . ....|.+|++.. .+||.++.. .++|..++...
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 3 3332 1 246899999954 799999875 57788887665
No 116
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.04 E-value=0.0086 Score=55.78 Aligned_cols=99 Identities=8% Similarity=-0.001 Sum_probs=69.0
Q ss_pred ceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeC-CCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEE-E
Q psy950 36 TTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN-GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ-I 113 (407)
Q Consensus 36 ~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~-~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~-~ 113 (407)
.|+++.+ .+++|.+..... .|.+.+++.......+.. ....|.++++++.++.+|.+....+.|...+++..... .
T Consensus 3 ~g~~~~~-~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 3 TGPALKA-GHEYMIVTNYPN-NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp -CCCCCT-TCEEEEEEETTT-EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccccccC-CCEEEEEeCCCC-eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 4566654 478888887654 899998875443333332 22369999999998899999988999999999865543 3
Q ss_pred Ec-cC-----CCCceEEEEeC--CEEEEEeC
Q psy950 114 IR-RN-----LPNPMGIAVHK--SDVYWVDR 136 (407)
Q Consensus 114 ~~-~~-----~~~P~~lav~~--~~lYwtd~ 136 (407)
+. .. ...|.++++.+ .+||.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred EEcccccccccccccceEECCCCCEEEEEcc
Confidence 22 11 23488999865 58888764
No 117
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.03 E-value=0.00018 Score=68.23 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=82.8
Q ss_pred CcceEEEeCCCCEEEEEEcCC-----CCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC-
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQ-----YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN- 107 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~-----~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d- 107 (407)
.|.++++||. |.+|+++.+. ...|++.+ +|.-. .+. .....|+++++++.++.|||++...+.|.+.+++
T Consensus 135 ~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~-~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 135 RSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KGKVT-KLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CCcEE-Eee-CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 4789999996 6688887531 24899998 65432 232 2456799999999999999999999999999986
Q ss_pred --C-C--eEEEEc---cCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCC
Q psy950 108 --G-G--NRQIIR---RNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 108 --G-~--~~~~~~---~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~ 148 (407)
| . +++.+. .....|.+++++. +.||.+.+..+.|.+.+..+
T Consensus 211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC
T ss_pred ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC
Confidence 4 2 223332 2346789999986 78888888888999988743
No 118
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.99 E-value=0.00044 Score=67.21 Aligned_cols=128 Identities=4% Similarity=-0.203 Sum_probs=80.7
Q ss_pred eeeeecCCcceEEEcCCC-CCcceEEEeCCCCEEEEEEcC--------CCCeEEEEeCCCCCe-EEEEeC-C-----CCC
Q psy950 15 RLALRLLKKKKKLKTSFR-SANTTSPFSPLPRLLYWIDYG--------QYPRIGKSYLDGSKW-TSIVSN-G-----ISM 78 (407)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~-~~P~~iavdp~~g~lywtd~~--------~~~~I~r~~~dG~~~-~~l~~~-~-----~~~ 78 (407)
.+..+|....+++-.-.+ ..| +++++|..+++|.++.+ ....|...++.-... ..+.-. . ...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCC
Confidence 444666665544433222 348 99999999999999842 123788888774443 333221 0 247
Q ss_pred ceeEEEeCCCCeEEEEeCC-CCeEEE--EecCCCeEEEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecC
Q psy950 79 PRDLTIDMQTHDVYWVDAK-LDLIQK--ISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 79 P~glaiD~~~~~lYw~d~~-~~~I~~--~~~dG~~~~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~ 147 (407)
|.+|++++.+++||+++.. .+.+.. +|... ...+. ...++.+.-.++..|.+....+++..++..
T Consensus 126 P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~--v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 126 VHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTK--SASCFHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp TTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEE--CSSCCCCEEEETTEEECCCCTTSCEEEECC
T ss_pred cceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEE--CCCceEEccCCCeEEEEEcCCCCEEEEECc
Confidence 9999999999999999976 567777 66544 33322 112233444556777777766666666654
No 119
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.98 E-value=4.4e-06 Score=57.38 Aligned_cols=41 Identities=27% Similarity=0.692 Sum_probs=34.7
Q ss_pred CCCCccCCC--------cccccccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTG--------NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~--------ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. . ++.|+|.|+++++ +|+|.|+.||.|..|+++|.
T Consensus 3 DidEC~~-~~~~~~~~~~~~C~~~C~n~~G-------sy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 3 DLDECAS-RSKSGEEDPQPQCQHLCHNYVG-------GYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp SCCTTTC-STTTCCCSSSCTTSSEEEEETT-------EEEEECSTTCEECTTSSCEE
T ss_pred ccccccC-cccccccccCCCCCCEeECCCC-------CeEEECCCCCeECCCCCccC
Confidence 3577865 2 4789999999987 69999999999999999996
No 120
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.92 E-value=0.0071 Score=57.80 Aligned_cols=102 Identities=9% Similarity=-0.066 Sum_probs=71.1
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCceEEEEeCC---CCcc-----cccC-----C-C-------CccEEE-EeccCCeEE
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTT---NPSS-----ASSN-----L-T-------NVVGVE-FDYADDKIL 319 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~---~~~~-----~~~~-----~-~-------~~~glA-vDwi~~~LY 319 (407)
...+.++++++.+++||.++... +.|....++ |... ...+ + . .+.+++ +++.++.||
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAG-NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCC-CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 45688899999999999998766 667666543 2211 1111 1 1 378999 999999999
Q ss_pred EEeCCCCC-----eEEEEECCC-Cc-c-c---cc-CCCceeEEEEcC---CCCeEEEEeCC
Q psy950 320 FTQIRPWA-----KIAWIPTTN-PS-S-A---SS-NLTNVVGVEFDY---ADDKILFTQIR 365 (407)
Q Consensus 320 wtd~~~~~-----~I~v~~~~~-~~-r-l---~~-~l~~P~~iavdp---~~g~lywtd~~ 365 (407)
.++... + +|.+.+++. .. . + .. ....|++++++| ..++||.++..
T Consensus 271 v~~~~~-~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 271 ASSRAN-KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp EEEEES-STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred EECCCC-CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC
Confidence 988765 4 799888752 22 1 1 21 235799999999 57889988764
No 121
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.88 E-value=0.00044 Score=66.76 Aligned_cols=112 Identities=10% Similarity=0.014 Sum_probs=82.8
Q ss_pred CcceEEEeCC---CCEEEEEEcCC-CCeEEEEeCCC-CCeEEEEe----CCCCCceeEEEeCCCCeEEEEeC--------
Q psy950 34 ANTTSPFSPL---PRLLYWIDYGQ-YPRIGKSYLDG-SKWTSIVS----NGISMPRDLTIDMQTHDVYWVDA-------- 96 (407)
Q Consensus 34 ~P~~iavdp~---~g~lywtd~~~-~~~I~r~~~dG-~~~~~l~~----~~~~~P~glaiD~~~~~lYw~d~-------- 96 (407)
+|.||.+.+. +.+||.+|... .++|+...+|- +...+++. ..+..|+.+++|+ .+++|+++.
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCccc
Confidence 7999999773 45899999873 45777766663 23444443 2466899999998 477777654
Q ss_pred ---------CCCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 97 ---------KLDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 97 ---------~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
..+.|.+++. ...+++...+..|.||++.. ..||++|...++|++.+...
T Consensus 192 ~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 2356777765 34556667889999999975 58999999999999888764
No 122
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.78 E-value=9.4e-05 Score=74.06 Aligned_cols=105 Identities=14% Similarity=0.195 Sum_probs=79.6
Q ss_pred CcceEEEeCC---CCEEEEEEcC-------C----CCeEEEEeCCCC-----CeEEEEe----CCCCCceeEEEeCCCCe
Q psy950 34 ANTTSPFSPL---PRLLYWIDYG-------Q----YPRIGKSYLDGS-----KWTSIVS----NGISMPRDLTIDMQTHD 90 (407)
Q Consensus 34 ~P~~iavdp~---~g~lywtd~~-------~----~~~I~r~~~dG~-----~~~~l~~----~~~~~P~glaiD~~~~~ 90 (407)
.+.+||++|. +++||+++.. . ..+|.|..+++. +.++|+. .....+.+|++++. ++
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~ 156 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QK 156 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SC
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-Ce
Confidence 3569999997 8999999853 0 248999998753 3455553 23457999999995 58
Q ss_pred EEEEeCC--------------------------------CCeEEEEecCCC-----------eEEEEccCCCCceEEEEe
Q psy950 91 VYWVDAK--------------------------------LDLIQKISYNGG-----------NRQIIRRNLPNPMGIAVH 127 (407)
Q Consensus 91 lYw~d~~--------------------------------~~~I~~~~~dG~-----------~~~~~~~~~~~P~~lav~ 127 (407)
||++-.. .++|.+++.||+ ..+++...+.+|+||+++
T Consensus 157 Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~d 236 (454)
T 1cru_A 157 IYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFT 236 (454)
T ss_dssp EEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEEC
T ss_pred EEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEEC
Confidence 9998431 468999999998 456666788999999999
Q ss_pred C-CEEEEEeCCCC
Q psy950 128 K-SDVYWVDRNLR 139 (407)
Q Consensus 128 ~-~~lYwtd~~~~ 139 (407)
. +.||.+|-...
T Consensus 237 p~G~L~~~d~g~~ 249 (454)
T 1cru_A 237 PNGKLLQSEQGPN 249 (454)
T ss_dssp TTSCEEEEEECSS
T ss_pred CCCCEEEEecCCC
Confidence 6 88999986543
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.78 E-value=0.034 Score=54.26 Aligned_cols=234 Identities=7% Similarity=-0.005 Sum_probs=142.0
Q ss_pred CeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCC--CeEEEEecCCCeEEEEccCCCCceEEEEeC--CEE
Q psy950 56 PRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKL--DLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDV 131 (407)
Q Consensus 56 ~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~--~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~l 131 (407)
..|...+++|.....+... -.....+++.+.+++|+++.... ..|...++.+...+.+........++++.+ .+|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEE
T ss_pred ceEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEE
Confidence 4899999999887777653 34678999999999999987643 689999998766655543334566777765 567
Q ss_pred EEEeCCCC--eEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcc
Q psy950 132 YWVDRNLR--TVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLH 209 (407)
Q Consensus 132 Ywtd~~~~--~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~ 209 (407)
+++....+ .|+..+..+ +. ...+... .+....++
T Consensus 238 a~~~~~~g~~~i~~~d~~~-~~---~~~l~~~---------------------------~~~~~~~~------------- 273 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLAS-GQ---IRQVTDG---------------------------RSNNTEPT------------- 273 (415)
T ss_dssp EEEECTTSSCEEEEEETTT-CC---EEECCCC---------------------------SSCEEEEE-------------
T ss_pred EEEEecCCCceEEEEECCC-CC---EEeCcCC---------------------------CCcccceE-------------
Confidence 77754332 466666554 21 1111100 00000001
Q ss_pred eEEecCCCccccCCCCcccccceeeeeecc-c---ceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecC-
Q psy950 210 YKCDCATGTPSASDPKKCTTMDEYLVFSTR-T---EIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRP- 284 (407)
Q Consensus 210 ~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~-~---~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~- 284 (407)
+.+|++ +|+++.. . .|..+.+....... .......+..+.+.+.+++|+++....
T Consensus 274 ----------~spdg~-------~l~~~s~~~g~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 274 ----------WFPDSQ-------NLAFTSDQAGRPQVYKVNINGGAPQR---ITWEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp ----------ECTTSS-------EEEEEECTTSSCEEEEEETTSSCCEE---CCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred ----------ECCCCC-------EEEEEECCCCCcEEEEEECCCCCEEE---EecCCCcccCeEECCCCCEEEEEECcCC
Confidence 112221 1222221 1 34444444322111 011223456788999999999887652
Q ss_pred CceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCC--eEEEEECCCCcc--cccCCCceeEEEEcCCC
Q psy950 285 WAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWA--KIAWIPTTNPSS--ASSNLTNVVGVEFDYAD 356 (407)
Q Consensus 285 ~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~--~I~v~~~~~~~r--l~~~l~~P~~iavdp~~ 356 (407)
...|+.+++++..... ... .+..+++.+.++.|+++.... + .|.++++++... +...-...+.++..|..
T Consensus 334 ~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~-~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQG-MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEET-TEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred ceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCC-CccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 1578999988765433 223 788999999999999886554 3 799999887642 43344667777777764
No 124
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.70 E-value=1e-05 Score=75.89 Aligned_cols=41 Identities=32% Similarity=0.822 Sum_probs=36.4
Q ss_pred CCCccCCC-cccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 181 NNPCFRTG-NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~-ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.|+|.. + ||+|+|.|.+..+ +|+|.|+.||.|..|+++|..
T Consensus 2 ~~eC~~-~~~~~C~~~C~~~~~-------~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 2 KNECHP-ERTDGCQHFCLPGQE-------SYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp -CCCCS-SCSSSCSSBCCCCTT-------SCCCBCCTTEEECTTSSCEEE
T ss_pred CCccCC-CCCCCCCCEeeCCCC-------CeEecCCCCcccCCCCCcccc
Confidence 489987 6 8999999998876 599999999999999999985
No 125
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.68 E-value=0.0011 Score=63.11 Aligned_cols=111 Identities=12% Similarity=-0.002 Sum_probs=80.9
Q ss_pred CcceEEE---eCCCCEEEE-EEcC-----------CCCeEEEEeCC----CCCeEEEEeC------------CCCCceeE
Q psy950 34 ANTTSPF---SPLPRLLYW-IDYG-----------QYPRIGKSYLD----GSKWTSIVSN------------GISMPRDL 82 (407)
Q Consensus 34 ~P~~iav---dp~~g~lyw-td~~-----------~~~~I~r~~~d----G~~~~~l~~~------------~~~~P~gl 82 (407)
+|.||.+ ||. |+|+. ++.+ ....+.+.+++ |.....+--. ....|+++
T Consensus 64 ~~sGl~~~~~D~~-grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNS-KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEESSSSSC-CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred eeeEEEEeccCCC-CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 5799999 788 88887 5521 12479999999 4333222100 12348999
Q ss_pred EEeCCCCeEEEEeCCC-CeEEEEecCCCeEEEEcc------CCCCceEEEEeC--CEEEEEeCCCCeEEEEecC
Q psy950 83 TIDMQTHDVYWVDAKL-DLIQKISYNGGNRQIIRR------NLPNPMGIAVHK--SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 83 aiD~~~~~lYw~d~~~-~~I~~~~~dG~~~~~~~~------~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~ 147 (407)
++|. .+++|++++.. +.|.+++.||........ ...-|.||++.+ ..|+..+. .++|.+.++.
T Consensus 143 avD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 143 AQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp EECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred EECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 9998 68999999999 999999999997665431 123366999984 67888887 8889998865
No 126
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.60 E-value=0.014 Score=57.74 Aligned_cols=104 Identities=8% Similarity=-0.129 Sum_probs=68.1
Q ss_pred CCCCEEEEEEcCCCCeEEEEeCCCC--CeEE--EE-------eCCCCCceeEEEeCCCCeEEEEeCCC------CeEEEE
Q psy950 42 PLPRLLYWIDYGQYPRIGKSYLDGS--KWTS--IV-------SNGISMPRDLTIDMQTHDVYWVDAKL------DLIQKI 104 (407)
Q Consensus 42 p~~g~lywtd~~~~~~I~r~~~dG~--~~~~--l~-------~~~~~~P~glaiD~~~~~lYw~d~~~------~~I~~~ 104 (407)
+.+++||.+..++. +|...++.-- ..+. .+ ..+...|+++.+-+.+ ||++..+. +.|..+
T Consensus 93 ~~r~~l~v~~l~s~-~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSS-RIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTC-CEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCC-eEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEE
Confidence 67899999988874 9999998522 1122 22 1244589999999865 99987655 688888
Q ss_pred ecCCCeEE-EEc-cCCCC--ceEEEEe--CCEEEEEeCC------------------CCeEEEEecCC
Q psy950 105 SYNGGNRQ-IIR-RNLPN--PMGIAVH--KSDVYWVDRN------------------LRTVYKASKLA 148 (407)
Q Consensus 105 ~~dG~~~~-~~~-~~~~~--P~~lav~--~~~lYwtd~~------------------~~~I~~~~~~~ 148 (407)
|....... .+. ..... ++++-+. .+.+|-++|. .++|...+...
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 87755443 332 22333 3334443 4789999875 56777777654
No 127
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.47 E-value=0.09 Score=50.92 Aligned_cols=241 Identities=11% Similarity=0.064 Sum_probs=149.4
Q ss_pred CcceEEEeCCCCEEEEEEcC----CCCeEEEEeCCC------CCeEEEE-------eCCCCCceeEEEeCCCCeEEEEeC
Q psy950 34 ANTTSPFSPLPRLLYWIDYG----QYPRIGKSYLDG------SKWTSIV-------SNGISMPRDLTIDMQTHDVYWVDA 96 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~----~~~~I~r~~~dG------~~~~~l~-------~~~~~~P~glaiD~~~~~lYw~d~ 96 (407)
-|.||++|...|+||.+=.. ...++-....++ .+...|. ...+..+.++.+|. .++|.+.|.
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~-~~rLWVLDt 105 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDD-CRRLWVVDI 105 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECT-TCEEEEEEC
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcC-CCcEEEEeC
Confidence 38999998667999998643 123566565542 1222211 12466889999998 689999997
Q ss_pred CC---------------CeEEEEecCCC--eE-EEEc--c----CCCCceEEEEe---------CCEEEEEeCCCCeEEE
Q psy950 97 KL---------------DLIQKISYNGG--NR-QIIR--R----NLPNPMGIAVH---------KSDVYWVDRNLRTVYK 143 (407)
Q Consensus 97 ~~---------------~~I~~~~~dG~--~~-~~~~--~----~~~~P~~lav~---------~~~lYwtd~~~~~I~~ 143 (407)
+. -+|..+|+.-. .. +.+. . .......|+|+ ++++|.||.....|..
T Consensus 106 G~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIV 185 (381)
T 3q6k_A 106 GSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFI 185 (381)
T ss_dssp SSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEE
T ss_pred CCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEE
Confidence 62 25778888654 32 3322 1 12344678888 4789999998889999
Q ss_pred EecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCC
Q psy950 144 ASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASD 223 (407)
Q Consensus 144 ~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d 223 (407)
.+... + +...++ |.+-+|. + . + . + .-+
T Consensus 186 ydl~~-~--~swRv~-------------~~~~~pd----~--~----~-----------------~--------~--~i~ 212 (381)
T 3q6k_A 186 YDHKK-Q--DSWNVT-------------HPTFKAE----R--P----T-----------------K--------F--DYG 212 (381)
T ss_dssp EETTT-T--EEEEEE-------------CGGGSCC----S--C----E-----------------E--------E--EET
T ss_pred EECCC-C--cEEEEc-------------cCCCccc----c--C----c-----------------c--------e--EEC
Confidence 99876 2 222222 2222221 0 0 0 0 0 000
Q ss_pred CCcccccceeeeeecccceEEeecCCCCCeeeeEeecCCcceEEEEEEcC----CCEEEEEEecCCceEEEEeC---CCC
Q psy950 224 PKKCTTMDEYLVFSTRTEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYA----DDKILFTQIRPWAKIAWIPT---TNP 296 (407)
Q Consensus 224 ~~~C~~~~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~----~~~lywsd~~~~~~I~~~~~---~~~ 296 (407)
|. .|. . ...+.+|++++. ++.|||.-..+ .+++++.. ...
T Consensus 213 G~------~~~------------------------~--~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~ 259 (381)
T 3q6k_A 213 GK------EYE------------------------F--KAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQK 259 (381)
T ss_dssp TE------EEE------------------------E--CCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSST
T ss_pred CE------EeE------------------------e--ccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCc
Confidence 10 000 0 012445666665 78999998887 77888762 211
Q ss_pred c---ccccCCC-----CccEEEEeccCCeEEEEeCCCCCeEEEEECCC-Cc-----c-cc--cCCCceeEEEEcCCCCeE
Q psy950 297 S---SASSNLT-----NVVGVEFDYADDKILFTQIRPWAKIAWIPTTN-PS-----S-AS--SNLTNVVGVEFDYADDKI 359 (407)
Q Consensus 297 ~---~~~~~~~-----~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~-~~-----r-l~--~~l~~P~~iavdp~~g~l 359 (407)
. ....+++ .-.++|+|.-+++||+++-.. +.|.+.+.++ .. . +. ..+..|.+|.+|+ .|+|
T Consensus 260 ~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~-~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~L 337 (381)
T 3q6k_A 260 GGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANT-KQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGL 337 (381)
T ss_dssp TCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSS-SEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCE
T ss_pred chhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccC-CeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeE
Confidence 1 1111221 233688998899999999999 8999999887 32 2 33 3678999999996 6789
Q ss_pred EEEe
Q psy950 360 LFTQ 363 (407)
Q Consensus 360 ywtd 363 (407)
|.+.
T Consensus 338 wv~s 341 (381)
T 3q6k_A 338 WFMS 341 (381)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
No 128
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.44 E-value=0.016 Score=53.18 Aligned_cols=110 Identities=6% Similarity=-0.035 Sum_probs=76.4
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-E
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-Q 112 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~ 112 (407)
.+.+..+.+..++||.++|..+ ++...+.+-.....-+... ..+-||+ +.+++||.+|. .++|..+|...... .
T Consensus 86 ~~FgeGit~~g~~ly~ltw~~~-~v~v~D~~t~~~~~ti~~~-~eG~glt--~dg~~L~~SdG-s~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 86 RYFGEGISDWKDKIVGLTWKNG-LGFVWNIRNLRQVRSFNYD-GEGWGLT--HNDQYLIMSDG-TPVLRFLDPESLTPVR 160 (262)
T ss_dssp TCCEEEEEEETTEEEEEESSSS-EEEEEETTTCCEEEEEECS-SCCCCEE--ECSSCEEECCS-SSEEEEECTTTCSEEE
T ss_pred ccceeEEEEeCCEEEEEEeeCC-EEEEEECccCcEEEEEECC-CCceEEe--cCCCEEEEECC-CCeEEEEcCCCCeEEE
Confidence 4555444444789999999875 9999998744433333322 1344555 55799999995 79999999875443 3
Q ss_pred EEc-c----CCCCceEEEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 113 IIR-R----NLPNPMGIAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 113 ~~~-~----~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
.+. . ....+..|+..+++||...|.++.|.+++..+
T Consensus 161 ~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp EEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTT
T ss_pred EEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCC
Confidence 332 2 22344467888899999999999999999876
No 129
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.43 E-value=0.11 Score=51.31 Aligned_cols=98 Identities=8% Similarity=0.025 Sum_probs=69.3
Q ss_pred ceEEEEE--EcCCCEEEEEEe-----cCCceEEEEeCCCCc-------------cc-------c---cCCCCccEEEEec
Q psy950 264 NVVGVEF--DYADDKILFTQI-----RPWAKIAWIPTTNPS-------------SA-------S---SNLTNVVGVEFDY 313 (407)
Q Consensus 264 ~~~ald~--d~~~~~lywsd~-----~~~~~I~~~~~~~~~-------------~~-------~---~~~~~~~glAvDw 313 (407)
.+..|.| ++.++++|.+.. .. +.|.++..++.. .. . .++..|.+|++..
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls-s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLS-SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCC-EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCC-ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 3444544 889999999988 66 667543332210 00 0 0123789999999
Q ss_pred cCCeEEEEeCCCCCeEEEEECCCCc--c----cccC-C-------------CceeEEEEcCCCCeEEEEe
Q psy950 314 ADDKILFTQIRPWAKIAWIPTTNPS--S----ASSN-L-------------TNVVGVEFDYADDKILFTQ 363 (407)
Q Consensus 314 i~~~LYwtd~~~~~~I~v~~~~~~~--r----l~~~-l-------------~~P~~iavdp~~g~lywtd 363 (407)
-++.||.++.+. ++|.+++.++.. + +..+ . ..|++++++|-..+||+++
T Consensus 331 DGrfLYVSnrg~-d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGI-GEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTT-TEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCC-CEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999999999 999999985332 2 1122 1 1599999999999999998
No 130
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.40 E-value=0.055 Score=51.30 Aligned_cols=110 Identities=8% Similarity=-0.022 Sum_probs=69.6
Q ss_pred CCCCCCccEEEEEEeeeeecCCcceEEEcCCCCCcce-----EEEeCCCCEEEEEEc-CCCCeEEEEeCCCCCeEEEEeC
Q psy950 1 MGSTLALASLIWAIRLALRLLKKKKKLKTSFRSANTT-----SPFSPLPRLLYWIDY-GQYPRIGKSYLDGSKWTSIVSN 74 (407)
Q Consensus 1 ~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~P~~-----iavdp~~g~lywtd~-~~~~~I~r~~~dG~~~~~l~~~ 74 (407)
+|+..+.++.+|. ....|...+.+ +..-..... .++.|...+|+++.. +....|...++++...+.+...
T Consensus 3 ~~~~~~~~~~~~~---~~~~g~~~~~l-t~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~ 78 (388)
T 3pe7_A 3 KGKQIPLTFDTYQ---DASTGAQVTRL-TPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG 78 (388)
T ss_dssp TTCEEECCCEEEE---CTTTCCEEEEC-SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS
T ss_pred ccccCcccceEEe---cCCCCcceEEe-cCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC
Confidence 4566666677764 22333333332 222222333 678899888888765 3334799999998776665543
Q ss_pred CCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEEc
Q psy950 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQIIR 115 (407)
Q Consensus 75 ~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~ 115 (407)
......++++.+.+++|+++... ..|...++++...+.+.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVY 118 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEE
T ss_pred CCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeee
Confidence 22222367899999999999853 58999999877665443
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.32 E-value=0.21 Score=52.00 Aligned_cols=111 Identities=5% Similarity=-0.024 Sum_probs=79.7
Q ss_pred CcceEEEeCCCCEEEEEEc-CC---CCeEEEEeCCCCCeEEEEeCCCC------------------------CceeEEEe
Q psy950 34 ANTTSPFSPLPRLLYWIDY-GQ---YPRIGKSYLDGSKWTSIVSNGIS------------------------MPRDLTID 85 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~-~~---~~~I~r~~~dG~~~~~l~~~~~~------------------------~P~glaiD 85 (407)
.+.++++.|...+|+++.. .. ...|...++++...+.+...... ....+++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4789999999999998876 22 13799999987776666642211 25789999
Q ss_pred CCCCeEEEEeCCCCeEEEEecCCC---eEEEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 86 MQTHDVYWVDAKLDLIQKISYNGG---NRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 86 ~~~~~lYw~d~~~~~I~~~~~dG~---~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
+.+++|+++.. +.|...++++. ..+.+......+..+++.. .+|+++.. +.|+..+..+
T Consensus 118 pDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~ 181 (741)
T 2ecf_A 118 PDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLAS 181 (741)
T ss_dssp TTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTT
T ss_pred CCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCC
Confidence 99999999886 89999999877 5544443344567777755 56777653 4677777665
No 132
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.20 E-value=0.1 Score=51.95 Aligned_cols=102 Identities=12% Similarity=0.113 Sum_probs=72.7
Q ss_pred CcceEEEeCC---CCEEEEEEcCC-----------CCeEEEEeCCCC--------CeEEEEe----CCCCCceeEEEeCC
Q psy950 34 ANTTSPFSPL---PRLLYWIDYGQ-----------YPRIGKSYLDGS--------KWTSIVS----NGISMPRDLTIDMQ 87 (407)
Q Consensus 34 ~P~~iavdp~---~g~lywtd~~~-----------~~~I~r~~~dG~--------~~~~l~~----~~~~~P~glaiD~~ 87 (407)
-+.+||++|. +++||++-... ..+|.|..++.. ..++|+. ........|++++.
T Consensus 70 Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD 149 (463)
T 2wg3_C 70 GLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD 149 (463)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT
T ss_pred cceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC
Confidence 4789999996 78888875321 138888888531 2455553 12345678999994
Q ss_pred CCeEEEEeC-----------------CCCeEEEEecCCC--------------------eEEEEccCCCCceEEEEeCC-
Q psy950 88 THDVYWVDA-----------------KLDLIQKISYNGG--------------------NRQIIRRNLPNPMGIAVHKS- 129 (407)
Q Consensus 88 ~~~lYw~d~-----------------~~~~I~~~~~dG~--------------------~~~~~~~~~~~P~~lav~~~- 129 (407)
++||++-. ..+.|.+++.||. ..++....+.+|+|++++..
T Consensus 150 -G~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~t 228 (463)
T 2wg3_C 150 -GFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHP 228 (463)
T ss_dssp -SCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSC
T ss_pred -CcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCC
Confidence 69999832 1467999999994 23566678999999999974
Q ss_pred -------EEEEEeC
Q psy950 130 -------DVYWVDR 136 (407)
Q Consensus 130 -------~lYwtd~ 136 (407)
++|.+|.
T Consensus 229 g~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 229 TDININLTILCSDS 242 (463)
T ss_dssp SSTTCSEEEEEECC
T ss_pred CCcccceEEEeccc
Confidence 6777874
No 133
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.14 E-value=0.024 Score=54.30 Aligned_cols=115 Identities=13% Similarity=0.042 Sum_probs=79.9
Q ss_pred CCCCCcceEEE--eCCCC--EEEEEEcCCCCeEEEEeC----CCCCeEEEEeC-C-CCCceeEEEeCCCCeEEEEeCCCC
Q psy950 30 SFRSANTTSPF--SPLPR--LLYWIDYGQYPRIGKSYL----DGSKWTSIVSN-G-ISMPRDLTIDMQTHDVYWVDAKLD 99 (407)
Q Consensus 30 ~~~~~P~~iav--dp~~g--~lywtd~~~~~~I~r~~~----dG~~~~~l~~~-~-~~~P~glaiD~~~~~lYw~d~~~~ 99 (407)
..+..|.|||+ +|..+ ++|.++.. .+++...+ +|.-...++.+ . -..|+|+++|..+++||..+...+
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~--G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKE--GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSS--SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCC--CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce
Confidence 34578999999 99877 57776654 46766554 33233333331 1 247999999999999999999855
Q ss_pred eEEEEecCCC---eEEEEc----cCC-CCceEEEEe-C----CEEEEEeCCCCeEEEEecC
Q psy950 100 LIQKISYNGG---NRQIIR----RNL-PNPMGIAVH-K----SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 100 ~I~~~~~dG~---~~~~~~----~~~-~~P~~lav~-~----~~lYwtd~~~~~I~~~~~~ 147 (407)
|++++.+.. ..+.+. ..+ ..|.||+++ . ++|+.++...++....+..
T Consensus 203 -Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 203 -IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp -EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred -EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999997632 233332 233 389999996 2 4899999888877767665
No 134
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.13 E-value=0.00023 Score=57.01 Aligned_cols=40 Identities=30% Similarity=0.670 Sum_probs=35.7
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
++|.. ++++|+|.|++..+ +|+|.|+.||.+..++++|..
T Consensus 55 ~~C~~-~~~~C~~~C~n~~g-------~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 55 LNCSL-DNGGCTHYCLEEVG-------WRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp SSSSS-GGGGCSSEEEECSS-------SEEEECCTTEEECTTSSCEEE
T ss_pred CcCcC-CCCCCCCEeECCCC-------CEEeECCCCeeECCCCCccCc
Confidence 57986 78999999999876 599999999999999999974
No 135
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.06 E-value=0.00028 Score=60.75 Aligned_cols=41 Identities=20% Similarity=0.581 Sum_probs=35.0
Q ss_pred CCCccCCCccc---ccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 181 NNPCFRTGNGG---CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~---Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.++|.. ++++ |+|.|.+.++ +|.|.|+.||.|..|+++|..
T Consensus 124 i~eC~~-~~~~~~~C~~~C~n~~g-------~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 124 IDECQV-APGEAPTCDHHCHNHLG-------GFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CCTTCC-CTTSCCSSSSEEEEETT-------EEEEECCTTEEECTTSSCEEE
T ss_pred cCcccC-CCCCCCccCCccccCCC-------CEEEeCCCCcEECCCCCcccc
Confidence 478986 5555 9999999887 699999999999999999963
No 136
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.97 E-value=0.0086 Score=59.87 Aligned_cols=148 Identities=9% Similarity=-0.020 Sum_probs=94.2
Q ss_pred CcceEEEcCCCCCcceEEEeCCC-CEEEEEEcCCCCeEEEEeCCCCCe-EEEE------eCC-----CCCceeEEEeCC-
Q psy950 22 KKKKKLKTSFRSANTTSPFSPLP-RLLYWIDYGQYPRIGKSYLDGSKW-TSIV------SNG-----ISMPRDLTIDMQ- 87 (407)
Q Consensus 22 ~~~~~l~~~~~~~P~~iavdp~~-g~lywtd~~~~~~I~r~~~dG~~~-~~l~------~~~-----~~~P~glaiD~~- 87 (407)
+.+..++..+|+.|++||+.|.. ++||.++.. .+|.+.+.+|... +.+. ..+ ..-+-|||+++.
T Consensus 3 gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~--G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f 80 (463)
T 2wg3_C 3 CFCIQEVVSGLRQPVGALHSGDGSQRLFILEKE--GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNY 80 (463)
T ss_dssp CEEEEEEEEEESSEEEEECCSSSSCCEEEEETT--TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTH
T ss_pred ceEEEEeccCCCCceEEEECCCCCeEEEEEeCC--ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCC
Confidence 34456677789999999999986 379999875 5899988777531 1111 111 234678999985
Q ss_pred --CCeEEEEeCCC------------CeEEEEecCCC--------eEEEEc----cCCCC-ceEEEEeC-CEEEEEeCC--
Q psy950 88 --THDVYWVDAKL------------DLIQKISYNGG--------NRQIIR----RNLPN-PMGIAVHK-SDVYWVDRN-- 137 (407)
Q Consensus 88 --~~~lYw~d~~~------------~~I~~~~~dG~--------~~~~~~----~~~~~-P~~lav~~-~~lYwtd~~-- 137 (407)
++.||++.... .+|.+..++.. ..+++. ....| --.|++.. ++||++-..
T Consensus 81 ~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 81 KKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp HHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred cCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 68999986421 37777777531 223433 12223 34566655 799999432
Q ss_pred ---------------CCeEEEEecCCCC----------C------CcccEEcccCCCCceeeEEe
Q psy950 138 ---------------LRTVYKASKLAST----------N------ITLPTPIRTGLSGLRDIAIF 171 (407)
Q Consensus 138 ---------------~~~I~~~~~~~~g----------~------~~~~~~i~~~~~~p~~i~i~ 171 (407)
.++|.|++.++.+ + ....++.+.++..|.++++.
T Consensus 161 ~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~d 225 (463)
T 2wg3_C 161 ITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVD 225 (463)
T ss_dssp CCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEE
T ss_pred CCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEEC
Confidence 3479999988610 0 01245666677777777654
No 137
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.89 E-value=0.0005 Score=58.28 Aligned_cols=42 Identities=24% Similarity=0.473 Sum_probs=34.7
Q ss_pred CCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 181 NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.++|....++.|+|.|.+.++ ++.|.|+.||.|..|+++|..
T Consensus 117 ~~eC~~~~~~~C~~~C~n~~g-------~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 117 INECTDFVDVPCSHFCNNFIG-------GYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CCTTTC-CCCCSSSEEEEETT-------EEEEECCTTCEECTTSSCEEC
T ss_pred CcccCCCCCCCCCCcccCcCC-------CEEEecCCCcEECCCCCcccc
Confidence 468875235789999999876 699999999999999999963
No 138
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.88 E-value=0.00047 Score=54.60 Aligned_cols=41 Identities=29% Similarity=0.831 Sum_probs=34.4
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
..|||.. ++++|++.|++.++ +|.|.|+.||.+. +++.|.+
T Consensus 28 d~neC~~-~~~~C~~~C~n~~g-------~y~C~C~~Gy~g~-~g~~C~d 68 (107)
T 2w2n_E 28 GTNECLD-NNGGCSYVCNDLKI-------GYECLCPDGFQLV-AQRRCED 68 (107)
T ss_dssp SCCGGGT-GGGGCSSEEECCSB-------SCEEECCTTCEEE-TTTEEEC
T ss_pred cCccCcC-CCCCCCCEeEeCCC-------CeEEECCCCcccc-CCCcccc
Confidence 5789987 67999999999876 5999999999864 6788864
No 139
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.83 E-value=0.021 Score=55.39 Aligned_cols=104 Identities=10% Similarity=0.132 Sum_probs=79.6
Q ss_pred CCcceEEEeCC----CCEEEEEEcCCCCeEEEEeC----C---CCCeEEEEeCC-CCCceeEEEeCCCCeEEEEeCCCCe
Q psy950 33 SANTTSPFSPL----PRLLYWIDYGQYPRIGKSYL----D---GSKWTSIVSNG-ISMPRDLTIDMQTHDVYWVDAKLDL 100 (407)
Q Consensus 33 ~~P~~iavdp~----~g~lywtd~~~~~~I~r~~~----d---G~~~~~l~~~~-~~~P~glaiD~~~~~lYw~d~~~~~ 100 (407)
+.-.|||+.|. .+.|||.-..+. +++++.. | ....+.+-..+ .....++++|..++.||+++...+.
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a 298 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQ 298 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCe
Confidence 34689999998 789999998764 8888873 2 23345555543 2345578999779999999999999
Q ss_pred EEEEecCC-----CeEEEEc--cCCCCceEEEEeC-CEEEEEeCC
Q psy950 101 IQKISYNG-----GNRQIIR--RNLPNPMGIAVHK-SDVYWVDRN 137 (407)
Q Consensus 101 I~~~~~dG-----~~~~~~~--~~~~~P~~lav~~-~~lYwtd~~ 137 (407)
|.+.+.++ .+..++. ..+..|-++++.. ++||.+.-+
T Consensus 299 I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 299 VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 99999988 4556655 5678999999964 889998644
No 140
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.66 E-value=0.53 Score=45.63 Aligned_cols=132 Identities=9% Similarity=0.017 Sum_probs=87.9
Q ss_pred eeeeecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEcCC-CCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEE
Q psy950 15 RLALRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDYGQ-YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYW 93 (407)
Q Consensus 15 ~~~~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~~~-~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw 93 (407)
++...++...+.+.. .-....++++.|...+|+++.... ...|...++++.....+.. .-.....++..+.+++|++
T Consensus 162 ~i~d~~g~~~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 162 RVSDYDGYNQFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp EEEETTSCSCEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEEECTTSSEEEE
T ss_pred EEEcCCCCCCEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-CCCcccCEEEcCCCCEEEE
Confidence 334445554444443 334578999999999999987642 3589999998766665543 2346789999999999998
Q ss_pred EeCC--CCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCC--eEEEEecCC
Q psy950 94 VDAK--LDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLR--TVYKASKLA 148 (407)
Q Consensus 94 ~d~~--~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~--~I~~~~~~~ 148 (407)
+-.. ...|...++.+...+.+.........+++.+ .+|+++....+ .|+..+..+
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp EECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred EEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 7654 4469999998766655443334456677754 46776654322 566666554
No 141
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.64 E-value=0.41 Score=45.75 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=54.6
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc-----ccc-----cCCCCccEEEEeccC---CeEEEEeCCCCCe
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS-----SAS-----SNLTNVVGVEFDYAD---DKILFTQIRPWAK 328 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~-----~~~-----~~~~~~~glAvDwi~---~~LYwtd~~~~~~ 328 (407)
...+.++.+|...++||+.+... + |.+++.+... .+. .+...+||||+..-. +.|+.++++. ++
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~-G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~-~s 255 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDE-A-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN-SS 255 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTT-E-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG-TE
T ss_pred CCCcceEEEcCCCCeEEEecccc-e-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC-CE
Confidence 34677899999999999999886 6 9998865221 111 333479999996544 4799999998 88
Q ss_pred EEEEECCCC
Q psy950 329 IAWIPTTNP 337 (407)
Q Consensus 329 I~v~~~~~~ 337 (407)
..+.+..+.
T Consensus 256 ~~Vydr~~~ 264 (355)
T 3amr_A 256 YAIYDRQGK 264 (355)
T ss_dssp EEEEESSTT
T ss_pred EEEEECCCC
Confidence 989888643
No 142
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.64 E-value=0.0069 Score=59.04 Aligned_cols=97 Identities=8% Similarity=-0.059 Sum_probs=72.8
Q ss_pred EcCCCEEEEEEec----CCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeC---------CCCCeEEEEECC
Q psy950 271 DYADDKILFTQIR----PWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQI---------RPWAKIAWIPTT 335 (407)
Q Consensus 271 d~~~~~lywsd~~----~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~---------~~~~~I~v~~~~ 335 (407)
.+..+++|++|.. . +.++.++......+. ..+..| +|++++-++.||.++. .. +.|.+++..
T Consensus 41 ~pd~~~vyV~~~~~~~~~-~~V~ViD~~t~~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~-~~VsviD~~ 117 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAV-TQQFVIDGEAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERT-DYVEVFDPV 117 (386)
T ss_dssp CCCTTEEEEEECGGGCSS-EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEE-EEEEEECTT
T ss_pred CCCCCEEEEEcCcccCCC-CEEEEEECCCCeEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCC-CEEEEEECC
Confidence 4678999999986 5 789999988765543 444466 5999999999999984 23 579999988
Q ss_pred CCcc---cccC-------CCceeEEEEcCCCCeEEEEeCCCCCcc
Q psy950 336 NPSS---ASSN-------LTNVVGVEFDYADDKILFTQIRPWAKI 370 (407)
Q Consensus 336 ~~~r---l~~~-------l~~P~~iavdp~~g~lywtd~~~~~~i 370 (407)
.... +.-. ...|++++++|-..+||.++......+
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 7653 2111 248999999999999999986433333
No 143
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.58 E-value=0.038 Score=56.56 Aligned_cols=114 Identities=11% Similarity=-0.014 Sum_probs=82.4
Q ss_pred CcceEEEeCCCCEEEEEEcCCCC-------------eEE---------------------EEeCCCCC----e-EEEEeC
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYP-------------RIG---------------------KSYLDGSK----W-TSIVSN 74 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~-------------~I~---------------------r~~~dG~~----~-~~l~~~ 74 (407)
+|.+++++|..+++|.|...++. .|. ..-+|+.. . ...+..
T Consensus 196 ~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv 275 (595)
T 1fwx_A 196 NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI 275 (595)
T ss_dssp CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE
T ss_pred CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec
Confidence 79999999999999999976421 111 11122222 1 112221
Q ss_pred CCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCe------------EEEEccCCCCceEEEEeC-CEEEEEeCCCCeE
Q psy950 75 GISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN------------RQIIRRNLPNPMGIAVHK-SDVYWVDRNLRTV 141 (407)
Q Consensus 75 ~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~------------~~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I 141 (407)
+ ..|+|+++.+.++++|.++...++|.+++++-.. ...-......|.++++++ +++|.+..-.+.|
T Consensus 276 g-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV 354 (595)
T 1fwx_A 276 A-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQV 354 (595)
T ss_dssp E-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEE
T ss_pred C-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcE
Confidence 2 3799999999999999999999999999998431 111125567899999987 7999999999988
Q ss_pred EEEecCC
Q psy950 142 YKASKLA 148 (407)
Q Consensus 142 ~~~~~~~ 148 (407)
.+.+...
T Consensus 355 ~kwdi~~ 361 (595)
T 1fwx_A 355 VKWNIED 361 (595)
T ss_dssp EEEEHHH
T ss_pred EEEEhhH
Confidence 8877653
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.57 E-value=0.37 Score=42.78 Aligned_cols=112 Identities=11% Similarity=0.005 Sum_probs=75.7
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCC-CCeEEEEeCC-CCCceeEEEeCCCCeEEEEeCC---CCeEEEEec
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDG-SKWTSIVSNG-ISMPRDLTIDMQTHDVYWVDAK---LDLIQKISY 106 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG-~~~~~l~~~~-~~~P~glaiD~~~~~lYw~d~~---~~~I~~~~~ 106 (407)
-....++++.|...+|+++.. ..|...++++ .....+.... ...+..+++.+.++.|+++... ...|..++.
T Consensus 41 ~~~v~~~~~spdg~~l~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNSE---GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEET---TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred CcceEeeEECCCCCEEEEEcC---CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 345789999999888888752 4899999988 6655544322 2456789999999999998743 578999988
Q ss_pred CCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCC--eEEEEecC
Q psy950 107 NGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLR--TVYKASKL 147 (407)
Q Consensus 107 dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~--~I~~~~~~ 147 (407)
++...+.+.. ......+++.. ..|+++....+ .|+.++..
T Consensus 118 ~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 118 TGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp TCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 8766554432 22366667754 56766554434 44444443
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.57 E-value=0.31 Score=49.25 Aligned_cols=254 Identities=8% Similarity=-0.056 Sum_probs=132.4
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC----CCCeEEEEec--CC
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA----KLDLIQKISY--NG 108 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~----~~~~I~~~~~--dG 108 (407)
..++++.|...+|.++.... ..+....++|...+.+..........++..+. +.||+++. ....|..++. +|
T Consensus 24 ~~~~~~~~DG~~la~~s~~~-g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSE-GSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp EEEEEEEETTTEEEEEEEET-TEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred hheeecCCCCCeEEEEEccC-CceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence 47889999988898876522 24444446777665554332234556666665 77888886 2236888998 88
Q ss_pred CeEEEEccCCCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCC
Q psy950 109 GNRQIIRRNLPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTG 188 (407)
Q Consensus 109 ~~~~~~~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ 188 (407)
...++.........+++.+++.++++....+.+...+..+ + ....+.. + + . .
T Consensus 102 ~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g---~~~~l~~-----------~----~--~-----~-- 153 (582)
T 3o4h_A 102 EEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDG-G---GLRELAR-----------L----P--G-----F-- 153 (582)
T ss_dssp CCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEET-T---EEEEEEE-----------E----S--S-----C--
T ss_pred ccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccC-C---cEEEeec-----------C----C--C-----c--
Confidence 7763322222222344555655555433333222333333 1 1111100 0 0 0 0
Q ss_pred cccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecc-----cceEEeecCCCCCeeeeEeecCCc
Q psy950 189 NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR-----TEIRALHLDPTLTAVPFKTVSNLT 263 (407)
Q Consensus 189 ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~-----~~I~~i~l~~~~~~~~~~~~~~~~ 263 (407)
. ..+.+||+ +|+++.. ..|..+.+...... . ......
T Consensus 154 --------------------~--------~~~spDG~-------~la~~~~~~~~~~~i~~~d~~~g~~~-~--l~~~~~ 195 (582)
T 3o4h_A 154 --------------------G--------FVSDIRGD-------LIAGLGFFGGGRVSLFTSNLSSGGLR-V--FDSGEG 195 (582)
T ss_dssp --------------------E--------EEEEEETT-------EEEEEEEEETTEEEEEEEETTTCCCE-E--ECCSSC
T ss_pred --------------------e--------EEECCCCC-------EEEEEEEcCCCCeEEEEEcCCCCCce-E--eecCCC
Confidence 0 00122332 1222211 23555555443221 1 112223
Q ss_pred ceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEE--------EeccCCeEEEEeCCCCCeEEEEE
Q psy950 264 NVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVE--------FDYADDKILFTQIRPWAKIAWIP 333 (407)
Q Consensus 264 ~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glA--------vDwi~~~LYwtd~~~~~~I~v~~ 333 (407)
....+.+.+.++.|+.++......|+..++++..... +....+.+++ +.+-+ .||++-... +++.+..
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~-g~~~l~~ 273 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE-GRSAVFI 273 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET-TEEEEEE
T ss_pred ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC-CcEEEEE
Confidence 4567889999999994443322379999988765432 2211344555 88888 788877766 6777777
Q ss_pred CCCCcccccCCCceeEEEEcCCCCeEEEE
Q psy950 334 TTNPSSASSNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 334 ~~~~~rl~~~l~~P~~iavdp~~g~lywt 362 (407)
+ |... ........++++. .|.++++
T Consensus 274 ~-g~~~-~~~~~~v~~~~~s--dg~~l~~ 298 (582)
T 3o4h_A 274 D-GERV-EAPQGNHGRVVLW--RGKLVTS 298 (582)
T ss_dssp T-TEEE-CCCSSEEEEEEEE--TTEEEEE
T ss_pred E-CCee-ccCCCceEEEEec--CCEEEEE
Confidence 7 4321 1111345677777 5666554
No 146
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.53 E-value=0.00084 Score=56.27 Aligned_cols=41 Identities=34% Similarity=0.712 Sum_probs=35.5
Q ss_pred CCCccCCCcccccccc-eecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 181 NNPCFRTGNGGCEQLC-FSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~lC-~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.++|.. ++++|.+.| ++.++ +|+|.|+.||.|..|+++|..
T Consensus 85 ~deC~~-~~~~C~~~C~~n~~g-------~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 85 DATCNI-KNGRCKQFCKTGADS-------KVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp ECCTTS-GGGSCSSBCCCCSSS-------CCCCBCCTTEEECTTSSSEEE
T ss_pred CccccC-CCCCCcCCCCCCCCC-------CEEeEcCCCcEeCCCCCcCCC
Confidence 478986 678999999 88766 699999999999999999974
No 147
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.52 E-value=0.001 Score=58.47 Aligned_cols=40 Identities=33% Similarity=0.698 Sum_probs=35.7
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
++|.. ++++|.+.|++.++ +|+|.|+.||.|..|+++|..
T Consensus 82 deC~~-~~~~C~~~C~n~~g-------sy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 82 KLCSL-DNGDCDQFCHEEQN-------SVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp CGGGT-GGGGCSSEEEEETT-------EEEEECCTTEEECTTSSCEEE
T ss_pred ccccC-CCCCCCCEeECCCC-------CeEEECCCCceeCCCCCcccc
Confidence 78987 67899999999876 699999999999999999984
No 148
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.42 E-value=0.0013 Score=54.21 Aligned_cols=40 Identities=33% Similarity=0.698 Sum_probs=35.2
Q ss_pred CCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 182 NPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 182 n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
++|.. ++++|.+.|++.++ +|+|.|+.||.|..|+++|..
T Consensus 82 d~C~~-~~~~C~~~C~~~~g-------~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 82 KLCSL-DNGDCDQFCHEEQN-------SVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp CGGGT-GGGGCSSEEEEETT-------EEEEECCTTEEECTTSSCEEE
T ss_pred Ccccc-CCCCCCCEeECCCC-------CEEEECCCCcEECCCCCccCc
Confidence 77976 67899999999876 699999999999999999974
No 149
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.35 E-value=0.0017 Score=54.10 Aligned_cols=36 Identities=36% Similarity=0.712 Sum_probs=31.5
Q ss_pred CcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 188 GNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 188 ~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.+++|+|.|++.++. +|+|.|+.||.|..|+++|..
T Consensus 94 ~~~~C~~~C~~~~g~------~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 94 ENGGCEQYCSDHTGT------KRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp GGGGCSSEEECCTTS------CCEEECCTTEEECTTSSCEEE
T ss_pred CCCCccCEeECCCCC------CEEEECCCCceECCCCCCCCC
Confidence 579999999988762 599999999999999999974
No 150
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.35 E-value=0.0012 Score=49.84 Aligned_cols=41 Identities=22% Similarity=0.626 Sum_probs=33.1
Q ss_pred CCCCccCCCccccc-ccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCE-QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs-~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. +...|. +.|++.++ +|+|.|+.||.+.+|+++|+
T Consensus 45 dideC~~-~~~~C~~~~C~n~~g-------~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 45 DIDECQR-DPLLCRGGVCHNTEG-------SYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp ECCHHHH-CSSTTTTSEEEEETT-------EEEEESCTTSCCCSSSCCCC
T ss_pred CcccccC-CCCcCCCCEeEcCCC-------CEEEECcCCcccCCCCCccC
Confidence 3577865 445676 68999876 69999999999999999884
No 151
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.15 E-value=0.00089 Score=52.97 Aligned_cols=40 Identities=30% Similarity=0.716 Sum_probs=0.5
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. .+.|++.|++.++ +|+|.|+.||.+.+|+++|+
T Consensus 68 dideC~~--~~~C~~~C~n~~g-------sy~C~C~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 68 DIDECQD--PDTCSQLCVNLEG-------GYKCQCEEGFQLDPHTKACK 107 (107)
T ss_dssp C------------------------------------------------
T ss_pred cccccCC--CCCcCCeeecCCC-------CEEEECCCCceECCCCCccC
Confidence 4678863 4689999999876 69999999999999999884
No 152
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.83 E-value=0.0042 Score=46.96 Aligned_cols=41 Identities=22% Similarity=0.596 Sum_probs=33.0
Q ss_pred CCCccCCCcccc-cccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 181 NNPCFRTGNGGC-EQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~C-s~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.++|.. +...| .+.|++.++ +|+|.|+.||.+.++++.|..
T Consensus 3 ideC~~-~~~~C~~~~C~n~~g-------~y~C~C~~G~~~~~~g~~C~d 44 (87)
T 1z6c_A 3 VDECSL-KPSICGTAVCKNIPG-------DFECECPEGYRYNLKSKSCED 44 (87)
T ss_dssp SCSSSS-SSSSBTTSSCCCBTT-------BCCCSSSTTCEEETTTTEEEC
T ss_pred cccccC-CCCCCCCCEeECCCC-------CEEEECCCCceECCCCCcCCC
Confidence 578876 44457 568998876 699999999999888999974
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.81 E-value=2.1 Score=44.09 Aligned_cols=69 Identities=9% Similarity=-0.117 Sum_probs=52.5
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG 108 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG 108 (407)
..+.++++.|. +++.++.. ..|...++++.....+.. .-..+..+++.+.+++|+++. .+.|...++++
T Consensus 82 ~~v~~~~~spd-~~~~~~~~---~~i~~~d~~~~~~~~l~~-~~~~~~~~~~SpdG~~la~~~--~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQ---GGLVGFDMLARKVTYLFD-TNEETASLDFSPVGDRVAYVR--NHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEEET---TEEEEEETTTTEEEEEEC-CTTCCTTCEECTTSSEEEEEE--TTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEEEC---CEEEEEECCCCceEEccC-CcccccCCcCCCCCCEEEEEE--CCeEEEEecCc
Confidence 45789999999 88777742 489999998766555543 234577889999999988874 47899999876
No 154
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=95.62 E-value=0.0046 Score=52.49 Aligned_cols=41 Identities=24% Similarity=0.577 Sum_probs=34.3
Q ss_pred CCCCccCCCcccccc-cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ-LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~-lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. +.+.|.+ .|++.++ +|+|.|+.||.+..|+++|.
T Consensus 121 dideC~~-~~~~C~~g~C~n~~g-------sy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 121 DIDECQE-LPGLCQGGKCINTFG-------SFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp ECCHHHH-CGGGGBTSEEEECSS-------CEEEECCTTCCBCTTTCBBC
T ss_pred ccccccC-CCCCcCCCEeEcCCC-------CEEeeCCCCccCCCCCCccC
Confidence 4678876 5577875 9999876 69999999999999999984
No 155
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=95.60 E-value=0.0041 Score=51.88 Aligned_cols=41 Identities=24% Similarity=0.618 Sum_probs=33.8
Q ss_pred CCCCccCCCcccccc-cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ-LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~-lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. +.+.|.+ .|++.++ +|+|.|+.||.+..|+++|.
T Consensus 106 dideC~~-~~~~C~~g~C~n~~g-------~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 106 DIDECEV-FPGVCKNGLCVNTRG-------SFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp ECCHHHH-STTCSSSSEEEEETT-------EEEEECCTTCCBCTTSSCBC
T ss_pred ccccccC-CCCCCCCCEEECCCC-------CEEeeCCCCCccCCCCCeeC
Confidence 4577875 4567876 8999876 69999999999999999984
No 156
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.31 E-value=0.73 Score=42.04 Aligned_cols=111 Identities=12% Similarity=0.021 Sum_probs=77.9
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe-CC----CCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS-NG----ISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG 109 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~-~~----~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~ 109 (407)
..+.++.+. |.++.++.+...+|...+.+|.....+.. .. ...|.++++++ ++.+++++...++|...+.+|.
T Consensus 79 ~~~~~~~~d-G~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 79 MQTARILPD-GNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQ 156 (276)
T ss_dssp EEEEEECTT-SCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSC
T ss_pred ccccEECCC-CCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCCCC
Confidence 445566554 56666666523477777788876544332 11 12577888887 5667789989999999999987
Q ss_pred eEEEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCC
Q psy950 110 NRQIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 110 ~~~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~ 148 (407)
....+.. ...|+++.+.. +.++.++...++|...+..+
T Consensus 157 ~~w~~~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 157 LLNSVKL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp EEEEEEC-SSCCCEEEECTTSCEEEECBTTSEEEEECTTT
T ss_pred EEEEEEC-CCCccceeEcCCCCEEEEeCCCCeEEEEeCcC
Confidence 6654432 35788888875 78899988888899988885
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=95.31 E-value=2.5 Score=42.46 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=75.4
Q ss_pred eecCCcceEEEcCCCCCcceEEEeCCCCEEEEEEc--C-CCCeEEEEeC--CCCCeEEEEeCCCCCceeEEEeCCCCeEE
Q psy950 18 LRLLKKKKKLKTSFRSANTTSPFSPLPRLLYWIDY--G-QYPRIGKSYL--DGSKWTSIVSNGISMPRDLTIDMQTHDVY 92 (407)
Q Consensus 18 ~~~~~~~~~l~~~~~~~P~~iavdp~~g~lywtd~--~-~~~~I~r~~~--dG~~~~~l~~~~~~~P~glaiD~~~~~lY 92 (407)
.++++..+.+.........+++..|. ..+|+++. + ...+|++.+. +|... .+. ........++.+.++.++
T Consensus 50 ~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~--~~~~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 50 LYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE--AVKPMRILSGVDTGEAVV 125 (582)
T ss_dssp EEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT--TSCSBEEEEEEECSSCEE
T ss_pred EEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-ccc--CCCCceeeeeCCCCCeEE
Confidence 34555544443333234678888888 88999986 2 2347888999 88766 222 222344567777777777
Q ss_pred EEeCCCCeEEEEecCCCeEEEEccCCCCceEEEE--eCCEEEEEeCC--C-CeEEEEecCC
Q psy950 93 WVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAV--HKSDVYWVDRN--L-RTVYKASKLA 148 (407)
Q Consensus 93 w~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav--~~~~lYwtd~~--~-~~I~~~~~~~ 148 (407)
++....+.+...++++...+.+..... .++++ ++..|+++... . ..|+..+..+
T Consensus 126 ~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 126 FTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred EEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 776655665677887776655442211 55555 45777765433 1 3577777654
No 158
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.21 E-value=1.5 Score=38.63 Aligned_cols=241 Identities=9% Similarity=0.049 Sum_probs=135.4
Q ss_pred CCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC-CeEEEEccC--CCCceEEEEeC--C
Q psy950 55 YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRRN--LPNPMGIAVHK--S 129 (407)
Q Consensus 55 ~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG-~~~~~~~~~--~~~P~~lav~~--~ 129 (407)
...|...++++.....+... -..+.++++.+.++.|+++. .+.|...++++ .....+... ...+..+++.. .
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred ceeEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 45788888876665555542 34678999999999888876 56899999987 655444322 24456677754 5
Q ss_pred EEEEEeCC---CCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCC
Q psy950 130 DVYWVDRN---LRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQN 206 (407)
Q Consensus 130 ~lYwtd~~---~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~ 206 (407)
.|+++... ...|+.++..+ + ....+... . ....++
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~-~---~~~~~~~~-~---------------------------~~~~~~---------- 135 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTG-G---TPRLMTKN-L---------------------------PSYWHG---------- 135 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTC-C---CCEECCSS-S---------------------------SEEEEE----------
T ss_pred EEEEEEeCCCCcceEEEEECCC-C---ceEEeecC-C---------------------------CccceE----------
Confidence 67777643 34666666543 1 11111100 0 000000
Q ss_pred CcceEEecCCCccccCCCCcccccceeeeeecc--c--ceEEeecCCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEe
Q psy950 207 KLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR--T--EIRALHLDPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQI 282 (407)
Q Consensus 207 ~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~--~--~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~ 282 (407)
+.+|++ .|+++.. . .|..+.+..... .........+..+.+++.++.|+++..
T Consensus 136 -------------~spdg~-------~l~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 136 -------------WSPDGK-------SFTYCGIRDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp -------------ECTTSS-------EEEEEEEETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred -------------ECCCCC-------EEEEEECCCCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEec
Confidence 112221 1221111 1 233333322111 111112234677889999998888764
Q ss_pred cC-CceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCC---------CCeEEEEECCCCcc--cc---cCCC
Q psy950 283 RP-WAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRP---------WAKIAWIPTTNPSS--AS---SNLT 345 (407)
Q Consensus 283 ~~-~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~---------~~~I~v~~~~~~~r--l~---~~l~ 345 (407)
.. ...|+.++.++..... .....+..+++.+.++.|+++.... ...|.+.++.+... +. ..-.
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 272 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQG 272 (297)
T ss_dssp TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTT
T ss_pred CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCc
Confidence 22 2567777766544332 2222567788999999998876531 04688899876542 32 1234
Q ss_pred ceeEEEEcCCCCeEEEEe
Q psy950 346 NVVGVEFDYADDKILFTQ 363 (407)
Q Consensus 346 ~P~~iavdp~~g~lywtd 363 (407)
.+..++..|...+|+++.
T Consensus 273 ~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 273 TMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp TSCSCCBCTTSSEEEEEE
T ss_pred ccccceECCCCCEEEEEE
Confidence 566678888777777774
No 159
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.97 E-value=0.41 Score=43.79 Aligned_cols=110 Identities=5% Similarity=-0.055 Sum_probs=80.0
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC-CCeEE
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN-GGNRQ 112 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d-G~~~~ 112 (407)
.|+++++++. |.+++++... .+|...+.+|...-.+-. -..|.+.++++ ++++++++...++|..++.+ |.-..
T Consensus 126 ~~~~v~~~~~-G~~lv~~~~~-~~v~~~d~~G~~~w~~~~--~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 126 QFRQINKNKK-GNYLVPLFAT-SEVREIAPNGQLLNSVKL--SGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp SCSCCEECTT-SCEEEEETTT-TEEEEECTTSCEEEEEEC--SSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred cccCceECCC-CCEEEEecCC-CEEEEECCCCCEEEEEEC--CCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 4778888876 5566777765 489999998765444332 24788888876 67888888888899999999 87765
Q ss_pred EEc-c-----CCCCceEEEEeC-CEEEEEeCC----------CCeEEEEecCC
Q psy950 113 IIR-R-----NLPNPMGIAVHK-SDVYWVDRN----------LRTVYKASKLA 148 (407)
Q Consensus 113 ~~~-~-----~~~~P~~lav~~-~~lYwtd~~----------~~~I~~~~~~~ 148 (407)
.+. . .+..|.++++.. +.+|.+++. ...++.++.++
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred EecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 553 1 355688999875 899999963 23577776654
No 160
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=94.90 E-value=0.29 Score=49.77 Aligned_cols=106 Identities=14% Similarity=0.092 Sum_probs=73.3
Q ss_pred CCCCCcceEEEeCCCCEEEEEEcC--------------------CCCeEEEEeCCCCC-------eEEEEeC--------
Q psy950 30 SFRSANTTSPFSPLPRLLYWIDYG--------------------QYPRIGKSYLDGSK-------WTSIVSN-------- 74 (407)
Q Consensus 30 ~~~~~P~~iavdp~~g~lywtd~~--------------------~~~~I~r~~~dG~~-------~~~l~~~-------- 74 (407)
..+++|..|+++|.+|.+|.+=.+ ....|.|...++.+ -..++..
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 346789999999999999998432 12579999886543 1233311
Q ss_pred -------------CCCCceeEEEeCCCCeEEE-EeCC-----------CCeEEEEecCCCeEEEEc--cCCCCceEEEEe
Q psy950 75 -------------GISMPRDLTIDMQTHDVYW-VDAK-----------LDLIQKISYNGGNRQIIR--RNLPNPMGIAVH 127 (407)
Q Consensus 75 -------------~~~~P~glaiD~~~~~lYw-~d~~-----------~~~I~~~~~dG~~~~~~~--~~~~~P~~lav~ 127 (407)
.+..|.+|++|.. +.||+ +|.. .+.+.+++.+....+.+. .....|.||++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 2568999999985 78999 8864 337888887544444333 345678999997
Q ss_pred C--CEEEEEeC
Q psy950 128 K--SDVYWVDR 136 (407)
Q Consensus 128 ~--~~lYwtd~ 136 (407)
. ..||.+-.
T Consensus 540 PD~ktLfV~vQ 550 (592)
T 4a9v_A 540 PDQKTLFVGIQ 550 (592)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 6 47887643
No 161
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=94.79 E-value=0.016 Score=43.51 Aligned_cols=41 Identities=24% Similarity=0.561 Sum_probs=31.2
Q ss_pred CCCccCCCcccccc-cceecCCCCCCCCcceEEecCCCccccC-CCCcccc
Q psy950 181 NNPCFRTGNGGCEQ-LCFSYPVEFPQNKLHYKCDCATGTPSAS-DPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~-lC~~~~~~~~~~~~~~~C~C~~G~~l~~-d~~~C~~ 229 (407)
.++|.. +.+.|.+ .|++.++ +|+|.|+.||.+.. +++.|.+
T Consensus 3 ideC~~-~~~~C~~g~C~n~~g-------~y~C~C~~Gy~~~~~~g~~C~d 45 (86)
T 1lmj_A 3 IDECRI-SPDLCGRGQCVNTPG-------DFECKCDEGYESGFMMMKNCMD 45 (86)
T ss_dssp CCTTTT-CSSTTTTSCEEEETT-------EEEECCCSSEEECTTTSSSEEE
T ss_pred cccccC-CCCCCCCCEEECCCC-------CEEeeCCCCcCccCCCCCccCC
Confidence 577876 4556865 8999876 69999999998653 5778863
No 162
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=94.78 E-value=0.017 Score=54.56 Aligned_cols=43 Identities=30% Similarity=0.781 Sum_probs=35.6
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
..++|....++.|.+.|++..+ +|+|.|+.||.+..++++|..
T Consensus 42 ~~~eC~~~~~~~C~~~C~~~~g-------~~~C~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 42 AKNECHPERTDGCQHFCLPGQE-------SYTCSCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp CSSSCCTTCTTSCSSEEECCSS-------SCEEECCTTEECCTTSSCCEE
T ss_pred CcccCCCCCCCCCcCccccCCC-------eeEEecccccccccccccccc
Confidence 5688975124799999999876 599999999998889999985
No 163
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=94.67 E-value=0.025 Score=40.98 Aligned_cols=36 Identities=17% Similarity=0.252 Sum_probs=23.0
Q ss_pred CCCccCCCccccc--ccceecCCCCCCCCcceEEecC-CCccccCCC
Q psy950 181 NNPCFRTGNGGCE--QLCFSYPVEFPQNKLHYKCDCA-TGTPSASDP 224 (407)
Q Consensus 181 ~n~C~~~~ng~Cs--~lC~~~~~~~~~~~~~~~C~C~-~G~~l~~d~ 224 (407)
.++|.. ....|. +.|+++++ +|+|.|. .||..+.++
T Consensus 3 idEC~~-~~~~C~~~~~C~Nt~G-------sy~C~~~~~g~~~~~~~ 41 (71)
T 2kl7_A 3 VNECLT-IPEACKGEMKCINHYG-------GYLCLPRSAAVINDLHG 41 (71)
T ss_dssp SCCTTC-CCCSCTTEEEEEETTC-------CEEEEETTSCCCSCCSC
T ss_pred cccccC-CCCCCCCCCEeECCCC-------CeEecccCCcccccccC
Confidence 577875 456784 58999987 5999922 344433333
No 164
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.67 E-value=4.7 Score=41.60 Aligned_cols=75 Identities=12% Similarity=0.075 Sum_probs=57.6
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCC---CeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGS---KWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~---~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
..++++.|...+|+++.. ..|...++++. ..+.+.. .-..+..+++.+.+++|+++.. +.|...++++...
T Consensus 111 v~~~~~SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQ 184 (741)
T ss_dssp SCCCEECTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEE
T ss_pred cceeEECCCCCEEEEEeC---CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCE
Confidence 478999999999998875 48999999877 5444433 2346789999999999988874 5899999988765
Q ss_pred EEEc
Q psy950 112 QIIR 115 (407)
Q Consensus 112 ~~~~ 115 (407)
..+.
T Consensus 185 ~~~~ 188 (741)
T 2ecf_A 185 MQLT 188 (741)
T ss_dssp EECC
T ss_pred EEec
Confidence 5443
No 165
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.65 E-value=4.6 Score=41.43 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=49.7
Q ss_pred EEEEcCCCEEEEEEecC---CceEEEEeCCCCcccc-cCCCCccEEEEeccCCeEEEEeCCCC--CeEEEEECCCCc
Q psy950 268 VEFDYADDKILFTQIRP---WAKIAWIPTTNPSSAS-SNLTNVVGVEFDYADDKILFTQIRPW--AKIAWIPTTNPS 338 (407)
Q Consensus 268 ld~d~~~~~lywsd~~~---~~~I~~~~~~~~~~~~-~~~~~~~glAvDwi~~~LYwtd~~~~--~~I~v~~~~~~~ 338 (407)
+.+++.++.||++.... ...|+++++++..... .....+..+++.+-++.|.++.+... ..|.+.++++..
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 68899999999987654 1378999887654322 22226778899988888887744321 468998887664
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.53 E-value=3 Score=38.83 Aligned_cols=80 Identities=10% Similarity=-0.011 Sum_probs=54.8
Q ss_pred cceEEEeCCCCEEEEEEcC-CCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEE
Q psy950 35 NTTSPFSPLPRLLYWIDYG-QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQI 113 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~-~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~ 113 (407)
+..+++.|...+|+++... ....|+..++++.....+.........+++..+.+++|+++... +.|..+++++...+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCCcEE
Confidence 6778899999888777543 33489999998876554433222122347788989999888754 379999998776544
Q ss_pred Ec
Q psy950 114 IR 115 (407)
Q Consensus 114 ~~ 115 (407)
+.
T Consensus 117 ~~ 118 (396)
T 3c5m_A 117 IY 118 (396)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 167
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.52 E-value=3.2 Score=39.00 Aligned_cols=247 Identities=11% Similarity=0.030 Sum_probs=130.0
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCC----CCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDG----SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG 108 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG----~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG 108 (407)
....++++.|...+|+-.... ..|...+++. ......+...-.....+++.+.+++++.+-...+.|...++..
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~d--g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 145 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDN--GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNK 145 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESS--SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTT
T ss_pred CceEEEEECCCCCeEEEEccC--CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCC
Confidence 346899999988777766543 3677777765 2222222222346789999987555666666678888888875
Q ss_pred Ce------EE-EE---ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCC
Q psy950 109 GN------RQ-II---RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQ 176 (407)
Q Consensus 109 ~~------~~-~~---~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~q 176 (407)
.. .. .+ ........++++.. +.++.+-...+.|...+... + .....+. .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~--~~~~~~~----------------~ 206 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA-K--KEVIHLS----------------Y 206 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT-T--EEEEEEC----------------C
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC-C--CcceEEe----------------c
Confidence 54 21 11 12234556777765 35666655556666666543 1 1111110 0
Q ss_pred CCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeeccc----ceEEeecCCCCC
Q psy950 177 PPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRT----EIRALHLDPTLT 252 (407)
Q Consensus 177 p~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~----~I~~i~l~~~~~ 252 (407)
+ .+... .......+++. +++. .+++.+... .|+-..+.....
T Consensus 207 ~----~~~~~-~~~~v~~~~~~-----------------------~~~~------~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 207 T----SPNSG-IKQQLSVVEWH-----------------------PKNS------TRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp C----CCSSC-CCCCEEEEEEC-----------------------SSCT------TEEEEEECCSSSCCCCEEETTSTTS
T ss_pred c----ccccc-cCCceEEEEEC-----------------------CCCC------CEEEEEECCCCCceEEEEeCCCCCC
Confidence 0 00000 00111111111 1110 011111111 233333322111
Q ss_pred eeeeEee--cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc---cCCCCccEEEEeccCCeEEEEeCCCCC
Q psy950 253 AVPFKTV--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS---SNLTNVVGVEFDYADDKILFTQIRPWA 327 (407)
Q Consensus 253 ~~~~~~~--~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~---~~~~~~~glAvDwi~~~LYwtd~~~~~ 327 (407)
+...+ .....+.++++.+.++.++.+-... +.|...++....... .....+..+++.+.+..++.+-+.. +
T Consensus 253 --~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-~ 328 (416)
T 2pm9_A 253 --PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-NTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD-N 328 (416)
T ss_dssp --CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-SEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS-S
T ss_pred --CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-CCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC-C
Confidence 11111 1234567888888444445555555 678888877654332 2223788999998876777777777 7
Q ss_pred eEEEEECCCCc
Q psy950 328 KIAWIPTTNPS 338 (407)
Q Consensus 328 ~I~v~~~~~~~ 338 (407)
+|.+.++....
T Consensus 329 ~i~iw~~~~~~ 339 (416)
T 2pm9_A 329 KIEVQTLQNLT 339 (416)
T ss_dssp EEEEEESCCCC
T ss_pred cEEEEEccCCC
Confidence 89999887654
No 168
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=94.27 E-value=0.015 Score=43.76 Aligned_cols=40 Identities=38% Similarity=0.835 Sum_probs=32.7
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEec--CCCccccCCCCcccc
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDC--ATGTPSASDPKKCTT 229 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C--~~G~~l~~d~~~C~~ 229 (407)
..++|.. +.|.+.|++.++ +|+|.| ..||.+..|+++|.+
T Consensus 44 dideC~~---~~C~~~C~n~~g-------~y~C~C~g~~G~~~~~~~~~C~d 85 (87)
T 1z6c_A 44 DIDECSE---NMCAQLCVNYPG-------GYTCYCDGKKGFKLAQDQKSCEV 85 (87)
T ss_dssp CCCHHHH---SCCSSEECCCSS-------SCCEECCSSSCCBCCTTSSSCBC
T ss_pred CcCeeCC---CCCCCEEEccCC-------CEEEECCCCcCCcccCCCCcceE
Confidence 4577854 679999999876 599999 489999999999964
No 169
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=94.20 E-value=0.012 Score=54.36 Aligned_cols=41 Identities=17% Similarity=0.584 Sum_probs=31.7
Q ss_pred CCCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCccccCCCCccccc
Q psy950 180 ENNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~ 230 (407)
..|+|.. +.+.|.+ .|.++++ +|+|.|..||. .||..|.+.
T Consensus 4 DiDEC~~-~~~~C~~~a~C~Nt~G-------sy~C~C~~Gy~--GnG~~C~d~ 46 (285)
T 1gl4_A 4 AQQTCAN-NRHQCSVHAECRDYAT-------GFCCRCVANYT--GNGRQCVAE 46 (285)
T ss_dssp ---CHHH-HGGGSCTTEEEEECSS-------CEEEEECTTEE--ECSSSEEET
T ss_pred cchhccC-CCCCCCCCCEeEcCCC-------CeEEEcCCCCC--CCCCcCCCC
Confidence 5689986 6688974 6999987 59999999997 689999843
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.18 E-value=6.1 Score=40.88 Aligned_cols=94 Identities=6% Similarity=-0.023 Sum_probs=60.7
Q ss_pred CCCCEEEEEEcC---CCCeEEEEeCCCCCeEEEEeCCC------CCceeEEEeCCCCeEEEEeCCC--C--eEEEEecCC
Q psy950 42 PLPRLLYWIDYG---QYPRIGKSYLDGSKWTSIVSNGI------SMPRDLTIDMQTHDVYWVDAKL--D--LIQKISYNG 108 (407)
Q Consensus 42 p~~g~lywtd~~---~~~~I~r~~~dG~~~~~l~~~~~------~~P~glaiD~~~~~lYw~d~~~--~--~I~~~~~dG 108 (407)
|..+++|++-.. ..+.|++.+.+|...++|+..+. ....++++.+.+++|.++-... . .|...++++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 668888887542 13488999988777777764221 1246889999999887765432 2 899999987
Q ss_pred CeEEEE-ccCCCCceEEEEeC--CEEEEEeC
Q psy950 109 GNRQII-RRNLPNPMGIAVHK--SDVYWVDR 136 (407)
Q Consensus 109 ~~~~~~-~~~~~~P~~lav~~--~~lYwtd~ 136 (407)
...... .... ...++++.. ..||++..
T Consensus 161 g~~~~~~~~~~-~~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 161 AKELPDVLERV-KFSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp TEEEEEEEEEE-CSCCEEECTTSSEEEEEEC
T ss_pred CCCCcccccCc-ccceEEEEeCCCEEEEEEE
Confidence 765432 2211 244567653 57777654
No 171
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.99 E-value=8.4 Score=41.87 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=61.9
Q ss_pred ceEEEEEE-cCCCEEEEEEecCCceEEEEeCCCCcccc--cCCC-CccEEEEeccCCeEEEEeCCCCCeEE-EEECCCCc
Q psy950 264 NVVGVEFD-YADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLT-NVVGVEFDYADDKILFTQIRPWAKIA-WIPTTNPS 338 (407)
Q Consensus 264 ~~~ald~d-~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~-~~~glAvDwi~~~LYwtd~~~~~~I~-v~~~~~~~ 338 (407)
.+.++.+. +.+++|.+.. . ..|+.++..+..... .... .+.++++. -++.|++... . ..|. +.++++..
T Consensus 297 ~v~~~~~S~pdG~~la~~~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~-~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS--R-GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-E-GDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE--T-TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-T-EEEEEEEETTTCC
T ss_pred ccceeeecCCCCCEEEEEE--c-CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-C-CceEEEEECCCCC
Confidence 45678888 8888887776 4 568888777654332 1111 34455554 4556777766 4 5788 88887654
Q ss_pred c--cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 339 S--ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 339 r--l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
. +......+..+++.|-..+|++...
T Consensus 371 ~~~l~~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 371 AEKFEENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp EEECCCCCCSEEEEEECTTSSEEEEEET
T ss_pred ceEecCCccceeeeEECCCCCEEEEECC
Confidence 2 4333467889999998777777654
No 172
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=93.90 E-value=0.032 Score=47.14 Aligned_cols=41 Identities=24% Similarity=0.570 Sum_probs=32.4
Q ss_pred CCCccCCCcccc-cccceecCCCCCCCCcceEEecCCCccccCCCCccccc
Q psy950 181 NNPCFRTGNGGC-EQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 181 ~n~C~~~~ng~C-s~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~ 230 (407)
.|+|.. ...| .+.|++.++ +|+|.|+.||.|.+++++|...
T Consensus 3 ideC~~--~~~C~~~~C~n~~g-------sy~C~C~~Gy~~~~~g~~C~d~ 44 (162)
T 1uzk_A 3 VNECLD--PTTCISGNCVNTPG-------SYICDCPPDFELNPTRVGCVDT 44 (162)
T ss_dssp CCGGGS--TTSSBTSEEEEETT-------EEEEECCTTCEECTTSSBEECC
T ss_pred cccCCC--CCCCCCCEeECCCC-------CEEEeCCCCCeECCCCCcccCC
Confidence 567763 2356 478999876 6999999999999999999743
No 173
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.75 E-value=4 Score=37.28 Aligned_cols=295 Identities=6% Similarity=-0.042 Sum_probs=149.3
Q ss_pred EEEeeeeecCCcceEEEcCCC-CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCe
Q psy950 12 WAIRLALRLLKKKKKLKTSFR-SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHD 90 (407)
Q Consensus 12 ~s~~~~~~~~~~~~~l~~~~~-~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~ 90 (407)
++-......|+..+.+...+- ....++++.|...+|+-.... ..|...++........+...-.....+++.+.++.
T Consensus 11 ~~~~~~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 88 (369)
T 3zwl_B 11 SSGENLYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKD--SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKY 88 (369)
T ss_dssp --CCCCCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESS--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred cCCcceEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCC--CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCE
Confidence 344445556665555444444 446999999987777766543 36777777654444444333446789999997666
Q ss_pred EEEEeCCCCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCC----CCeEEEEecCCCCCCcccEEcccCCCC
Q psy950 91 VYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRN----LRTVYKASKLASTNITLPTPIRTGLSG 164 (407)
Q Consensus 91 lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~----~~~I~~~~~~~~g~~~~~~~i~~~~~~ 164 (407)
|+.+. ..+.|...++..............+..+++.. ..++..... .+.|...+... +. .....
T Consensus 89 l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~-~~-~~~~~------- 158 (369)
T 3zwl_B 89 CVTGS-ADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIER-DS-ATHEL------- 158 (369)
T ss_dssp EEEEE-TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEE-CT-TTCCE-------
T ss_pred EEEEe-CCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecC-Cc-cceee-------
Confidence 66554 46788888887554433223344566777765 233333221 13343333322 00 00000
Q ss_pred ceeeEEeeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceE
Q psy950 165 LRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIR 243 (407)
Q Consensus 165 p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~ 243 (407)
.... ..+. . .... ..+. ....|.+- .+++ .+|+.+. ...|.
T Consensus 159 ----~~~~--~~~~-~--~~~~-~~~~----------------~~~~~~~~-----~~~~-------~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 159 ----TKVS--EEPI-H--KIIT-HEGL----------------DAATVAGW-----STKG-------KYIIAGHKDGKIS 200 (369)
T ss_dssp ----EEEC--SSCS-E--EEEC-CTTC----------------CCEEEEEE-----CGGG-------CEEEEEETTSEEE
T ss_pred ----cccc--ccee-e--eccC-CcCc----------------cceeEEEE-----cCCC-------CEEEEEcCCCEEE
Confidence 0000 0000 0 0000 0000 01111111 1111 1222222 23344
Q ss_pred EeecCCCCCeeeeEee-cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEE
Q psy950 244 ALHLDPTLTAVPFKTV-SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILF 320 (407)
Q Consensus 244 ~i~l~~~~~~~~~~~~-~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYw 320 (407)
-..+..... ++..+ .....+.++++++.++.|+.... . +.|...++....... .....+..+++.+.++.|+.
T Consensus 201 i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 201 KYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYFITSSR-D-TNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp EEETTTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEET-T-SEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred EEECCCCcE--eEEEEecCCCceeEEEECCCCCEEEEecC-C-ceEEEEECCCCceeeeecCCCCceeEEecCCCceEEE
Confidence 444433111 11111 22345778999988777766543 3 568888887654433 22237889999999988888
Q ss_pred EeCCCCC-------------eEEEEECCCCcc---cccCCCceeEEEEcCCCCeEEE
Q psy950 321 TQIRPWA-------------KIAWIPTTNPSS---ASSNLTNVVGVEFDYADDKILF 361 (407)
Q Consensus 321 td~~~~~-------------~I~v~~~~~~~r---l~~~l~~P~~iavdp~~g~lyw 361 (407)
..... . .|.+.++..... +.........+++.|...+|+-
T Consensus 277 ~~~~~-~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 277 GGGQE-AKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYAS 332 (369)
T ss_dssp EECCC--------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eecCC-CceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEE
Confidence 76654 2 455666554432 2223456777888875544443
No 174
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=93.51 E-value=0.018 Score=46.02 Aligned_cols=39 Identities=23% Similarity=0.686 Sum_probs=31.3
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCC-CCcc
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASD-PKKC 227 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d-~~~C 227 (407)
..++|.. ++.|.+.|++.++ +|+|.|+.||.+..+ +++|
T Consensus 79 dideC~~--~~~C~~~C~n~~g-------~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 79 DIDECEN--GGFCSGVCHNLPG-------TFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp ECCHHHH--CSSCSSEEEECSS-------SEEEEECSSSSCEEEESCCC
T ss_pred cccccCC--CCCCcCeEEeCCC-------CEEEECCCCCccCCCCCCCC
Confidence 3577864 3678899999876 599999999998777 7766
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.45 E-value=0.72 Score=47.20 Aligned_cols=116 Identities=6% Similarity=0.026 Sum_probs=79.6
Q ss_pred CCcceEEEeCCCCEEEEEEcC--------CCCeEEEEeCCC------CCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCC
Q psy950 33 SANTTSPFSPLPRLLYWIDYG--------QYPRIGKSYLDG------SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKL 98 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~--------~~~~I~r~~~dG------~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~ 98 (407)
....++++.|...+|+++... ....|.+.+++| ...+.+...+.....++++.+.+++|+|+....
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECT
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCC
Confidence 356889999999999988643 114899999998 555544412334567889999999999987432
Q ss_pred -------CeEEEEecCC-C---eEEEEcc-CCCCceEEEEeC-CEEEEEeCCCC--eEEEEecCC
Q psy950 99 -------DLIQKISYNG-G---NRQIIRR-NLPNPMGIAVHK-SDVYWVDRNLR--TVYKASKLA 148 (407)
Q Consensus 99 -------~~I~~~~~dG-~---~~~~~~~-~~~~P~~lav~~-~~lYwtd~~~~--~I~~~~~~~ 148 (407)
..|..+++++ . ..+.+.. ....+..+++.. +.+|++....+ .|++++..+
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC
Confidence 5799999984 3 3334433 245677888764 45777655444 788877654
No 176
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=93.31 E-value=0.057 Score=40.05 Aligned_cols=38 Identities=18% Similarity=0.516 Sum_probs=27.5
Q ss_pred CCCccCCCccccc-ccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 181 NNPCFRTGNGGCE-QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 181 ~n~C~~~~ng~Cs-~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.++|.. ...|. +.|++.++ +|+|.|+.||.+.++ ++|.
T Consensus 44 ideC~~--~~~C~~~~C~n~~g-------~y~C~C~~G~~g~~~-~~C~ 82 (82)
T 1emn_A 44 TDECSV--GNPCGNGTCKNVIG-------GFECTCEEGFEPGPM-MTCE 82 (82)
T ss_dssp CCGGGT--CCTTSSSCEEECSS-------SEEECCSSSSCCCSS-SCCC
T ss_pred cccccC--CCCCCCCEeECCCC-------CEEeECCCCeEeCCC-CccC
Confidence 466753 23554 58888876 599999999998777 7773
No 177
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=92.62 E-value=0.05 Score=40.36 Aligned_cols=38 Identities=21% Similarity=0.634 Sum_probs=27.9
Q ss_pred CCCCccCCCcccccc-cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ-LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~-lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. +..|.+ .|++.++ +|+|.|+.||.+ +++.|.
T Consensus 4 dideC~~--~~~C~~g~C~n~~g-------~y~C~C~~Gy~~--~g~~C~ 42 (82)
T 1emn_A 4 DMDECKE--PDVCKHGQCINTDG-------SYRCECPFGYIL--AGNECV 42 (82)
T ss_dssp CCCSSSS--TTSCSSSEECCCSS-------CCCEECCTTEEE--ETTEEE
T ss_pred ccccCCC--CCCcCCCEEEecCC-------CEEEECCCCeEC--CCCccC
Confidence 3467753 356665 7888776 599999999986 577785
No 178
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.38 E-value=12 Score=38.96 Aligned_cols=70 Identities=6% Similarity=-0.007 Sum_probs=48.5
Q ss_pred CCCCEEEEEEcCC---CCeEEEEeCC---CCCeEEEEeCC-C-----CCceeEEEeCCCCeEEEEeCC--C--CeEEEEe
Q psy950 42 PLPRLLYWIDYGQ---YPRIGKSYLD---GSKWTSIVSNG-I-----SMPRDLTIDMQTHDVYWVDAK--L--DLIQKIS 105 (407)
Q Consensus 42 p~~g~lywtd~~~---~~~I~r~~~d---G~~~~~l~~~~-~-----~~P~glaiD~~~~~lYw~d~~--~--~~I~~~~ 105 (407)
|..+++|++-... .+.|+|.+.+ |...++|+..+ + ....++++.+.+++|.++-.. . ..|...+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 6788888875432 4689999987 66667765422 1 134678999998888776432 2 3699999
Q ss_pred cCCCeE
Q psy950 106 YNGGNR 111 (407)
Q Consensus 106 ~dG~~~ 111 (407)
+++...
T Consensus 196 l~tg~~ 201 (741)
T 1yr2_A 196 VADGKP 201 (741)
T ss_dssp TTTCCE
T ss_pred CCCCCC
Confidence 987765
No 179
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=92.37 E-value=0.11 Score=32.37 Aligned_cols=23 Identities=30% Similarity=0.600 Sum_probs=17.0
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|++..+ +|+|.|+.||. |..|.
T Consensus 16 ~C~~~~~-------~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 16 SCKDDIN-------SYECWCPFGFE----GKNCE 38 (39)
T ss_dssp EEEEETT-------EEEEECCTTCC----STTSC
T ss_pred EeEcCCC-------ceEeECCCCCc----CCccC
Confidence 4666554 69999999996 66663
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.14 E-value=1.2 Score=41.68 Aligned_cols=113 Identities=12% Similarity=0.037 Sum_probs=69.1
Q ss_pred cceEEEeCCCCEEEEEEc-CCCC--eEEEEeCCCCCeEEEEeCCC-----CCceeEEEeCCCCeEEEEe--------CCC
Q psy950 35 NTTSPFSPLPRLLYWIDY-GQYP--RIGKSYLDGSKWTSIVSNGI-----SMPRDLTIDMQTHDVYWVD--------AKL 98 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~-~~~~--~I~r~~~dG~~~~~l~~~~~-----~~P~glaiD~~~~~lYw~d--------~~~ 98 (407)
....+..|...+|+++.. .... .|.+.++++...+.+....- ..|.++++.+.++.|+++- ...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 346789999887866543 2322 49999999877666544221 1256667777788888753 456
Q ss_pred CeEEEEecCCCeEEEEccCCC-----------CceEEEEe--CCEEEEEeCCCC--eEEEEecC
Q psy950 99 DLIQKISYNGGNRQIIRRNLP-----------NPMGIAVH--KSDVYWVDRNLR--TVYKASKL 147 (407)
Q Consensus 99 ~~I~~~~~dG~~~~~~~~~~~-----------~P~~lav~--~~~lYwtd~~~~--~I~~~~~~ 147 (407)
..|..+++++...+.+..... ....+++. +.+||++....+ .|++++..
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 320 PFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred CEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 689999999877655542222 24455654 367888765433 56666654
No 181
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.89 E-value=8.4 Score=36.22 Aligned_cols=267 Identities=10% Similarity=-0.008 Sum_probs=136.2
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeE----EEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEec
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWT----SIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISY 106 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~----~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~ 106 (407)
....+..++.+|....++|+-... ..|...+++...+. ..+...-.....++..+.++.++.+-...+.|...++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~-g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 33 TTWDSGFCAVNPKFMALICEASGG-GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEI 111 (402)
T ss_dssp CCCSSCSEEECSSEEEEEBCCSSS-CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEEC
T ss_pred CccCCCcEEECCCeEEEEEEEcCC-CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEc
Confidence 334567788888866666654433 47888887654321 1111122356889999844555555556678888887
Q ss_pred CCCe--------EEEEccCCCCceEEEEeCC--EEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCC
Q psy950 107 NGGN--------RQIIRRNLPNPMGIAVHKS--DVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQ 176 (407)
Q Consensus 107 dG~~--------~~~~~~~~~~P~~lav~~~--~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~q 176 (407)
.... ...+.........|++..+ .++.+-...+.|...+... + .....+. ..
T Consensus 112 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~--~~~~~~~---------------~~ 173 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-G--AAVLTLG---------------PD 173 (402)
T ss_dssp CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-T--EEEEEEC---------------TT
T ss_pred cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-C--CccEEEe---------------cC
Confidence 6542 2333334455667777653 3555544455555555443 1 1111110 00
Q ss_pred CCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceEEeecCCCCCeee
Q psy950 177 PPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIRALHLDPTLTAVP 255 (407)
Q Consensus 177 p~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~~i~l~~~~~~~~ 255 (407)
. ..+....+++. +++. +|+.+. ...|+-..+........
T Consensus 174 ---~-------~~~~v~~~~~~-----------------------~~~~-------~l~~~~~d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 174 ---V-------HPDTIYSVDWS-----------------------RDGA-------LICTSCRDKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp ---T-------CCSCEEEEEEC-----------------------TTSS-------CEEEEETTSEEEEEETTTTEEEEE
T ss_pred ---C-------CCCceEEEEEC-----------------------CCCC-------EEEEEecCCcEEEEeCCCCceeee
Confidence 0 00111111111 1110 011111 11222222222110000
Q ss_pred eEeecCCcceEEEEEEcCCCEEEEEE--ecCCceEEEEeCCCCccc---c--cCCCCccEEEEeccCCeEEEEeCCCCCe
Q psy950 256 FKTVSNLTNVVGVEFDYADDKILFTQ--IRPWAKIAWIPTTNPSSA---S--SNLTNVVGVEFDYADDKILFTQIRPWAK 328 (407)
Q Consensus 256 ~~~~~~~~~~~ald~d~~~~~lywsd--~~~~~~I~~~~~~~~~~~---~--~~~~~~~glAvDwi~~~LYwtd~~~~~~ 328 (407)
+........+..+.+.+.++.|+... ... +.|...++...... . .....+..+++++.++.||.+.... +.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d-g~ 291 (402)
T 2aq5_A 214 KDRPHEGTRPVHAVFVSEGKILTTGFSRMSE-RQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD-SS 291 (402)
T ss_dssp EECSSCSSSCCEEEECSTTEEEEEEECTTCC-EEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC-SC
T ss_pred eccCCCCCcceEEEEcCCCcEEEEeccCCCC-ceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC-Ce
Confidence 00111112245677776554444332 234 67888887664321 1 2223788999999999999998777 78
Q ss_pred EEEEECCCCcc----cc--cCCCceeEEEEcCCCCe
Q psy950 329 IAWIPTTNPSS----AS--SNLTNVVGVEFDYADDK 358 (407)
Q Consensus 329 I~v~~~~~~~r----l~--~~l~~P~~iavdp~~g~ 358 (407)
|.+.++..... +. ..-..+.+++..|...+
T Consensus 292 i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 292 IRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL 327 (402)
T ss_dssp EEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS
T ss_pred EEEEEecCCCcceEeecccccCCcccceEEeccccc
Confidence 99998876542 22 22366788888886543
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.68 E-value=4.6 Score=41.09 Aligned_cols=117 Identities=9% Similarity=-0.032 Sum_probs=70.5
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCC--CCC------ceeEEEeCCCCeEEEEeCCCCeEEE
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNG--ISM------PRDLTIDMQTHDVYWVDAKLDLIQK 103 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~--~~~------P~glaiD~~~~~lYw~d~~~~~I~~ 103 (407)
...+.+++..|....+|-++.+...+|++.++++...+.+.... ... ...+++.+.++.+|........|..
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGI 320 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEE
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEE
Confidence 45678899999877444444433348999998766655554321 111 3466776655544444444557888
Q ss_pred EecCCCeEEEEccCCCCceEE-EEeCCEEEEEeCCCC---eEEEEecCC
Q psy950 104 ISYNGGNRQIIRRNLPNPMGI-AVHKSDVYWVDRNLR---TVYKASKLA 148 (407)
Q Consensus 104 ~~~dG~~~~~~~~~~~~P~~l-av~~~~lYwtd~~~~---~I~~~~~~~ 148 (407)
+++++...+.+........++ +.+++.++++-.... .|+.++..+
T Consensus 321 ~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 321 LDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp EETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred EECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 898877766554333334456 677777776654333 677777654
No 183
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=91.54 E-value=0.079 Score=43.64 Aligned_cols=41 Identities=22% Similarity=0.564 Sum_probs=31.7
Q ss_pred CCCccCCCccccc--ccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 181 NNPCFRTGNGGCE--QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~Cs--~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.++|.. ....|. +.|++.++ +|+|.|+.||.+..+++.|..
T Consensus 96 ideC~~-~~~~C~~~~~C~n~~g-------~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 96 VDECSS-GQHQCDSSTVCFNTVG-------SYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp CCHHHH-TCCCCCTTSEEEECSS-------CEEEECCSSSCBCTTCCSSBT
T ss_pred ccCccC-cCCCCCCCCEEECCCC-------CEEeeCCCCcccCCCCccCcc
Confidence 456654 345665 68998876 699999999999889998864
No 184
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=91.42 E-value=0.097 Score=43.33 Aligned_cols=40 Identities=18% Similarity=0.573 Sum_probs=31.3
Q ss_pred CCCCccCCCcccccc-cceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 180 ENNPCFRTGNGGCEQ-LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~-lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
..++|.. ..|.+ .|++.++ +|+|.|+.||.+..++++|..
T Consensus 3 dideC~~---~pC~ng~C~n~~g-------~y~C~C~~G~~g~~~~~~C~~ 43 (147)
T 2w86_A 3 DIDECES---SPCINGVCKNSPG-------SFICECSSESTLDPTKTICIE 43 (147)
T ss_dssp CCCGGGG---CCSBTSEEEEETT-------EEEEECCTTEEECTTSSBEEE
T ss_pred cCccCcC---CCCCCCEeECCCC-------CEEeECCCCcccCCCCCeecC
Confidence 3567764 45764 8998876 699999999998888888864
No 185
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=90.78 E-value=0.15 Score=34.82 Aligned_cols=36 Identities=28% Similarity=0.685 Sum_probs=23.0
Q ss_pred CCCCccCCCcccccccc-eecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQLC-FSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC-~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..+||. |.|.|..+= +... .+|+|.||.||. |..|.
T Consensus 12 ~s~pC~--NgGtC~~~~~~d~~-------~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 12 EKTFCV--NGGECFMVKDLSNP-------SRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp TTTTSC--TTCEEEEECCC--C-------CCEEEEECTTEE----STTSC
T ss_pred cCCCCC--CCCCcCCCCccCCC-------CCEeEeCCCCCc----CCCcC
Confidence 457885 356664321 2222 369999999998 88885
No 186
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=90.41 E-value=6.2 Score=42.95 Aligned_cols=106 Identities=12% Similarity=0.004 Sum_probs=77.2
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCC---------CeE
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKL---------DLI 101 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~---------~~I 101 (407)
....+.++++.|...+|+++... ..|...++++.....+..........++..+.++.|.++.... ..|
T Consensus 377 ~~~~~~~~~~SpDG~~la~~~~~--~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGKFAVVANDR--FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp CCCSEEEEEECTTSSEEEEEETT--SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred CccceeeeEECCCCCEEEEECCC--CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 33567899999999999887654 3899999987666666644444568899999999998876432 589
Q ss_pred EEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCC
Q psy950 102 QKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNL 138 (407)
Q Consensus 102 ~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~ 138 (407)
...++++.....+......+..+++.. .+|||.....
T Consensus 455 ~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 455 HVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp EEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred EEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 999998776555544455567777754 6788876543
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=89.86 E-value=19 Score=36.90 Aligned_cols=94 Identities=4% Similarity=-0.018 Sum_probs=60.6
Q ss_pred CCCCEEEEEEcCC---CCeEEEEeCCCCCeEEEEeCCC------CCceeEEEeCCCCeEEEEeCCC----CeEEEEecCC
Q psy950 42 PLPRLLYWIDYGQ---YPRIGKSYLDGSKWTSIVSNGI------SMPRDLTIDMQTHDVYWVDAKL----DLIQKISYNG 108 (407)
Q Consensus 42 p~~g~lywtd~~~---~~~I~r~~~dG~~~~~l~~~~~------~~P~glaiD~~~~~lYw~d~~~----~~I~~~~~dG 108 (407)
|..+++|++-... .+.|+|.+.+|...++|+..+. ....++++.+.+++|.++-... ..|...++++
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 5678888875432 4689999998888777775321 1356889999999877664322 5799999987
Q ss_pred CeEEEEccCCCCc--eEEEEeC--CEEEEEeC
Q psy950 109 GNRQIIRRNLPNP--MGIAVHK--SDVYWVDR 136 (407)
Q Consensus 109 ~~~~~~~~~~~~P--~~lav~~--~~lYwtd~ 136 (407)
..... ...+... .++++.+ ..||++..
T Consensus 157 g~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 157 GEWSK-VDVIEGGKYATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp CCBCS-SCCBSCCTTCCCEECTTSSEEEEEEC
T ss_pred CCCcC-CcccCcccccceEEecCCCEEEEEEe
Confidence 65420 1111111 4666654 46777654
No 188
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.60 E-value=5.9 Score=37.00 Aligned_cols=98 Identities=18% Similarity=0.237 Sum_probs=67.9
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc---cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS---SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS 339 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~---~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r 339 (407)
..+.+++|.+.++.++.+-... +.|...++....... .....+..|++.+.++++..+-+.. ++|.+.++.....
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d-~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D-~~i~iwd~~~~~~ 304 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDET-GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED-CTVAVLDADFSEV 304 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESS-SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT-SCEEEECTTSCEE
T ss_pred ccccchhhhhcccceEEEeecc-cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC-CEEEEEECCCCcE
Confidence 3467889988877777665555 678888876654332 2333788999988887766666666 7899988876543
Q ss_pred --cccCCCceeEEEEcCCCCeEEEE
Q psy950 340 --ASSNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 340 --l~~~l~~P~~iavdp~~g~lywt 362 (407)
....-....+|+..|..+.++.+
T Consensus 305 ~~~~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 305 FRDLSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEE
T ss_pred eEECCCCCCEEEEEEeCCCCCEEEE
Confidence 22233567889999877766665
No 189
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=89.55 E-value=0.29 Score=45.21 Aligned_cols=34 Identities=24% Similarity=0.686 Sum_probs=29.1
Q ss_pred ccccccceecCCCCCCCCcceEEecCCCccccCCCCccccc
Q psy950 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 190 g~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~ 230 (407)
..|+|.|.+..+ ++.|.|..||.|..|+++|...
T Consensus 131 ~~c~~~C~n~~g-------~~~csC~~Gy~L~~d~~~C~~~ 164 (286)
T 1nt0_A 131 VPCDHYCHXYLG-------GYYCSCRVGYILHQNKHTCSAL 164 (286)
T ss_dssp -CCSSEEEEETT-------EEEEECCTTEEECTTSSCEEEC
T ss_pred ccCCCccccccC-------ceEeecCCCceeccCCCCcccc
Confidence 369999999876 6999999999999999999743
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.51 E-value=4.4 Score=37.11 Aligned_cols=61 Identities=15% Similarity=0.130 Sum_probs=45.4
Q ss_pred CCcceEEEeCCCCEEEEEEcC---CCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEe
Q psy950 33 SANTTSPFSPLPRLLYWIDYG---QYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVD 95 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~---~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d 95 (407)
.....+++.|...+|+++... ....|+..++++.....+..... ..+++..+.+++|+++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEE
Confidence 356778999999999888653 23469999998876665554322 77889988888888875
No 191
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=89.40 E-value=0.28 Score=31.99 Aligned_cols=16 Identities=25% Similarity=0.750 Sum_probs=13.9
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 27 ~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 27 QNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp EEEEEECTTCS----STTSC
T ss_pred CEEEECCCCCc----cCCCC
Confidence 69999999997 77775
No 192
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=88.97 E-value=0.21 Score=45.93 Aligned_cols=41 Identities=24% Similarity=0.646 Sum_probs=31.9
Q ss_pred CCccCC--CcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 182 NPCFRT--GNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 182 n~C~~~--~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
++|... .+.+|+|.|.+..+ ++.|.|+.||.|..|.+.|..
T Consensus 122 ~~C~~~~~~~~~c~~~C~n~~g-------~~~C~C~~Gy~l~~d~~~C~~ 164 (278)
T 3dem_A 122 DECKEREDEELSCDHYCHNYIG-------GYYCSCRFGYILHTDNRTCRV 164 (278)
T ss_dssp CTTTC-----CCCSSEEEEETT-------EEEEECCTTCEECTTSSCEEC
T ss_pred ccCCCCCCCcccCCcCcCCccC-------CcEEEeCCcceeccCCCCCcc
Confidence 456541 13589999998876 699999999999999999973
No 193
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=88.65 E-value=0.22 Score=39.56 Aligned_cols=33 Identities=33% Similarity=0.811 Sum_probs=26.4
Q ss_pred CCCCccCCCcccccccceec-CCCCCCCCcceEEecCCCccccC
Q psy950 180 ENNPCFRTGNGGCEQLCFSY-PVEFPQNKLHYKCDCATGTPSAS 222 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~-~~~~~~~~~~~~C~C~~G~~l~~ 222 (407)
..++|. +..|.|.|++. ++ +|+|.|+.||.+..
T Consensus 3 dideC~---~~pC~~~C~~~~~g-------~y~C~C~~Gy~g~~ 36 (118)
T 1dx5_I 3 PVDPCF---RANCEYQCQPLDQT-------SYLCVCAEGFAPIP 36 (118)
T ss_dssp CCCGGG---GCCCSSEEEECSSS-------CEEEECCTTEEEET
T ss_pred ccccCC---CCCCCCCCCCCCCC-------CEEeECCCCccccC
Confidence 457885 37899999998 55 69999999998653
No 194
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=88.65 E-value=0.39 Score=32.19 Aligned_cols=16 Identities=31% Similarity=1.053 Sum_probs=14.0
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 28 ~~~C~C~~G~~----G~~Ce 43 (53)
T 1egf_A 28 SYTCNCVIGYS----GDRCQ 43 (53)
T ss_dssp CEEEECCTTCC----SSSSC
T ss_pred CEEEECCCCCc----CCcCC
Confidence 69999999997 77886
No 195
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=88.60 E-value=23 Score=36.08 Aligned_cols=111 Identities=6% Similarity=0.021 Sum_probs=71.3
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCC---CceeEEEeCCCCeEEEEeCC--------CCeE
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGIS---MPRDLTIDMQTHDVYWVDAK--------LDLI 101 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~---~P~glaiD~~~~~lYw~d~~--------~~~I 101 (407)
..+.+++..|...++| ++ ....|...++++.....++...-. .+..+++.+.+++|.++... ...|
T Consensus 17 ~~~~~~~~spdg~~~~-~~--~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIY-RE--QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCC-CC--SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEE-Ee--CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 3578888888866554 32 234888888887666666653221 47899999999988887532 2678
Q ss_pred EEEecCCCeEEEEccCCC---CceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 102 QKISYNGGNRQIIRRNLP---NPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 102 ~~~~~dG~~~~~~~~~~~---~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
...++++...+.+..... .+..+++.. .+|.++.. +.|+..+..+
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~ 143 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVG 143 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSS
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCC
Confidence 888988766544432111 144555543 46666644 4677777665
No 196
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=88.05 E-value=25 Score=35.82 Aligned_cols=79 Identities=8% Similarity=-0.077 Sum_probs=56.3
Q ss_pred CcceEEEeCCCCEEEEEEcCC-------CCeEEEEeCCCCCeEEEEeCCC--CCceeEEEeCCCCeEEEEeCCCCeEEEE
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQ-------YPRIGKSYLDGSKWTSIVSNGI--SMPRDLTIDMQTHDVYWVDAKLDLIQKI 104 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~-------~~~I~r~~~dG~~~~~l~~~~~--~~P~glaiD~~~~~lYw~d~~~~~I~~~ 104 (407)
...++++.|...+|..+.... ...|...++++...+.+..... ..+..+++.+.+++|.++.. +.|...
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEE
Confidence 378999999999888875421 1588899998776544433211 13667889999988888875 689999
Q ss_pred ecCCCeEEEE
Q psy950 105 SYNGGNRQII 114 (407)
Q Consensus 105 ~~dG~~~~~~ 114 (407)
++++...+.+
T Consensus 140 ~~~~g~~~~~ 149 (723)
T 1xfd_A 140 AHVGKQAIRV 149 (723)
T ss_dssp SSSSSCCEEE
T ss_pred ECCCCceEEE
Confidence 9887655433
No 197
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=88.04 E-value=0.28 Score=34.22 Aligned_cols=16 Identities=38% Similarity=1.018 Sum_probs=14.1
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 31 ~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 31 RYLCKCQPGFT----GARCT 46 (63)
T ss_dssp CEEEECCTTEE----STTSC
T ss_pred CEEEECCCCCc----CCccC
Confidence 69999999997 77885
No 198
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.89 E-value=14 Score=34.41 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=67.4
Q ss_pred ceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc---cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc-
Q psy950 264 NVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS---SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS- 339 (407)
Q Consensus 264 ~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~---~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r- 339 (407)
.+.++++.+.++.++.+-... +.|...++....... +-...+..|++.+.+.++..+-+.. ++|.+.++.....
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~d-g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDEN-GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED-CSLAVLDSSLSELF 293 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETT-SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT-SCEEEECTTCCEEE
T ss_pred cceeeeecCCCCcceEEeccC-CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC-CeEEEEECCCCcEE
Confidence 466788888888877776666 778888876554332 3233788999988887777776666 7899888776543
Q ss_pred -cccCCCceeEEEEcCCCCeEEEE
Q psy950 340 -ASSNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 340 -l~~~l~~P~~iavdp~~g~lywt 362 (407)
+...-....+++..|...+|+-+
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEE
Confidence 22233567888888887777665
No 199
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=86.78 E-value=0.45 Score=30.68 Aligned_cols=16 Identities=31% Similarity=1.053 Sum_probs=13.8
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 25 ~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 25 SYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp SEEEECCTTEE----TTTTC
T ss_pred CEEEEcCCCCc----CCcCC
Confidence 69999999997 77775
No 200
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.49 E-value=20 Score=33.11 Aligned_cols=274 Identities=8% Similarity=0.052 Sum_probs=144.8
Q ss_pred CCcceEEEeCCCC-EEEEEEcCCCCeEEEEeC----CCCC------eEEEEeCC----------CCCceeEEEeCCCCeE
Q psy950 33 SANTTSPFSPLPR-LLYWIDYGQYPRIGKSYL----DGSK------WTSIVSNG----------ISMPRDLTIDMQTHDV 91 (407)
Q Consensus 33 ~~P~~iavdp~~g-~lywtd~~~~~~I~r~~~----dG~~------~~~l~~~~----------~~~P~glaiD~~~~~l 91 (407)
....++++.|... +|+..... ..|...++ +... ....+... -.....+++.+.++.|
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred CceEEEEECCCCCcEEEEecCC--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 4578999999987 77666543 36666666 4333 22222221 2257899999977777
Q ss_pred EEEeCCCCeEEEEecCCCeEEEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeE
Q psy950 92 YWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIA 169 (407)
Q Consensus 92 Yw~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~ 169 (407)
+.+. ..+.|...+.+|.....+.........+++.+ ..|+.. ...+.|...+... + .....+..
T Consensus 124 ~~~~-~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~-~--~~~~~~~~--------- 189 (425)
T 1r5m_A 124 VTGV-ENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISM-DVENVTILWNVIS-G--TVMQHFEL--------- 189 (425)
T ss_dssp EEEE-TTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTT-T--EEEEEECC---------
T ss_pred EEEe-CCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEE-ecCCeEEEEECCC-C--cEEEEeec---------
Confidence 6665 45678888877877766655555667888865 344443 3345565555543 1 11111110
Q ss_pred EeeecCCCCCCCCCccCCCccc--ccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecccceEEeec
Q psy950 170 IFDIVNQPPDENNPCFRTGNGG--CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTRTEIRALHL 247 (407)
Q Consensus 170 i~~~~~qp~~~~n~C~~~~ng~--Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~~~I~~i~l 247 (407)
...+....+.... ...+ ...+++ .++ ..++.......|.-..+
T Consensus 190 ----~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------------~~~-------~~~~~~~~~g~i~~~d~ 234 (425)
T 1r5m_A 190 ----KETGGSSINAENH-SGDGSLGVDVEW-----------------------VDD-------DKFVIPGPKGAIFVYQI 234 (425)
T ss_dssp ----C----------------CCCBSCCEE-----------------------EET-------TEEEEECGGGCEEEEET
T ss_pred ----cccCccceeeccc-cCCcceeeEEEE-----------------------cCC-------CEEEEEcCCCeEEEEEc
Confidence 0000000000000 0000 001111 011 11222233344554444
Q ss_pred CCCCCeeeeEeecCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc---cCCCCccEEEEeccCCeEEEEeCC
Q psy950 248 DPTLTAVPFKTVSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS---SNLTNVVGVEFDYADDKILFTQIR 324 (407)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~---~~~~~~~glAvDwi~~~LYwtd~~ 324 (407)
........ .......+.++++.+.++.|+.... . +.|...++....... .....+..+++.+-+ ++.+-..
T Consensus 235 ~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~ 308 (425)
T 1r5m_A 235 TEKTPTGK--LIGHHGPISVLEFNDTNKLLLSASD-D-GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSM 308 (425)
T ss_dssp TCSSCSEE--ECCCSSCEEEEEEETTTTEEEEEET-T-SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEET
T ss_pred CCCceeee--eccCCCceEEEEECCCCCEEEEEcC-C-CEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeC
Confidence 43221111 1122345778999988886665553 3 568777776544332 223377888888765 6666666
Q ss_pred CCCeEEEEECCCCcc---cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 325 PWAKIAWIPTTNPSS---ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 325 ~~~~I~v~~~~~~~r---l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
. +.|.+.++..... +...-..+..+++.|...+|+-...
T Consensus 309 d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 309 D-GSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp T-SEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred C-CcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC
Confidence 6 7899999876653 2223467889999997666665543
No 201
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=85.75 E-value=25 Score=33.44 Aligned_cols=99 Identities=12% Similarity=0.108 Sum_probs=71.0
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcc-cc---cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCC
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS-AS---SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNP 337 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~-~~---~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~ 337 (407)
...+.+++|.+.++.++.+-... +.|...++..... .. .....+..|++.+.++.++.+.... ++|.+.++...
T Consensus 277 ~~~v~~i~~~p~~~~~l~tg~~d-g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d-~~i~iwd~~~~ 354 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILATGSAD-KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKI 354 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETT-SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-SCCEEEEGGGT
T ss_pred CCCeEEEEeCCCCCCEEEEEeCC-CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC-CcEEEEeCCCC
Confidence 34577899999888888887777 7899988876332 21 2233788999999888899998888 88999987652
Q ss_pred --------------ccc--cc-CCCceeEEEEcCCCCeEEEE
Q psy950 338 --------------SSA--SS-NLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 338 --------------~rl--~~-~l~~P~~iavdp~~g~lywt 362 (407)
..+ .. ....++.++.+|...+++.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICS 396 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEE
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEE
Confidence 111 12 23568899999987645544
No 202
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=85.31 E-value=24 Score=32.93 Aligned_cols=112 Identities=4% Similarity=-0.089 Sum_probs=65.5
Q ss_pred CcceEEEeC-CCCEEEEEEcCCCCeEEEEeCCCC-------CeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEe
Q psy950 34 ANTTSPFSP-LPRLLYWIDYGQYPRIGKSYLDGS-------KWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKIS 105 (407)
Q Consensus 34 ~P~~iavdp-~~g~lywtd~~~~~~I~r~~~dG~-------~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~ 105 (407)
...+++++| ...+|+-.... ..|...+++.. .....+.........++..+.+++++++-...+.|...+
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~d--g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSED--CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETT--SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CEEEEEeCCCCCCEEEEEeCC--CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 358999999 54455444333 37777777643 222223323346789999998766666666778899988
Q ss_pred cCCCeE-EEE--ccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 106 YNGGNR-QII--RRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 106 ~dG~~~-~~~--~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
+..... ..+ .........+++.. +.++.+-...+.|...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 875544 344 22334456777754 3333333334455555544
No 203
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.88 E-value=18 Score=33.38 Aligned_cols=83 Identities=12% Similarity=-0.043 Sum_probs=55.6
Q ss_pred CCCcceEEEeC-CCCEEEEEEcCCC----CeEEEEeCCCCCeEEEEeCC-CCCceeEEEeCCCCeEEEEeC--CCCe--E
Q psy950 32 RSANTTSPFSP-LPRLLYWIDYGQY----PRIGKSYLDGSKWTSIVSNG-ISMPRDLTIDMQTHDVYWVDA--KLDL--I 101 (407)
Q Consensus 32 ~~~P~~iavdp-~~g~lywtd~~~~----~~I~r~~~dG~~~~~l~~~~-~~~P~glaiD~~~~~lYw~d~--~~~~--I 101 (407)
......+++.| ..++|+++..+.. .+|...+++|...+.+.... ...+..+++.+.+++|+++.. .... |
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 34467889999 5666777654322 47999999987766555421 224667899998888888743 2334 9
Q ss_pred EEEecCCCeEEEE
Q psy950 102 QKISYNGGNRQII 114 (407)
Q Consensus 102 ~~~~~dG~~~~~~ 114 (407)
...++++...+.+
T Consensus 267 ~~~d~~~g~~~~l 279 (396)
T 3c5m_A 267 YKANPETLENEEV 279 (396)
T ss_dssp EEECTTTCCEEEE
T ss_pred EEEECCCCCeEEe
Confidence 9999876655443
No 204
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=83.03 E-value=0.68 Score=31.11 Aligned_cols=16 Identities=31% Similarity=1.024 Sum_probs=14.2
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 28 ~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 28 KYACNCVVGYI----GERCQ 43 (53)
T ss_dssp EEEEEECTTEE----STTSC
T ss_pred CEEEecCCCCc----CCCCC
Confidence 69999999997 78886
No 205
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=82.43 E-value=34 Score=32.43 Aligned_cols=243 Identities=8% Similarity=0.004 Sum_probs=131.4
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCC-----------CCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCe
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDG-----------SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDL 100 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG-----------~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~ 100 (407)
...+..|++.|..+.++.+-... ..|...+++. .....+. ..-..+.+|+..+.+..++.+-...+.
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~d-g~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPS-SDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSS-SCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred CCcEEEEEECCCCCcEEEEECCC-CcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 45689999999877777665433 4777777763 2223332 223467899999987746666667788
Q ss_pred EEEEecCCCeE--------EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEE
Q psy950 101 IQKISYNGGNR--------QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAI 170 (407)
Q Consensus 101 I~~~~~dG~~~--------~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i 170 (407)
|...++..... ..+.........+++.. +.++.+....+.|...+... +.. . .+ +..
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~-~~~--~--------~~--~~~ 272 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN-NNT--S--------KP--SHT 272 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC-SCS--S--------SC--SEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC-CCC--C--------cc--eeE
Confidence 88888865211 12223333456677754 55666655556665555443 100 0 00 000
Q ss_pred eeecCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeee-ecccceEEeecCC
Q psy950 171 FDIVNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVF-STRTEIRALHLDP 249 (407)
Q Consensus 171 ~~~~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~-s~~~~I~~i~l~~ 249 (407)
+.. ..+...++++. +++.. +++. +....|+-..+..
T Consensus 273 ~~~--------------~~~~v~~i~~~-----------------------p~~~~------~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 273 VDA--------------HTAEVNCLSFN-----------------------PYSEF------ILATGSADKTVALWDLRN 309 (430)
T ss_dssp EEC--------------CSSCEEEEEEC-----------------------SSCTT------EEEEEETTSEEEEEETTC
T ss_pred eec--------------CCCCeEEEEeC-----------------------CCCCC------EEEEEeCCCeEEEEeCCC
Confidence 000 01111222221 11110 0111 1122344344433
Q ss_pred CCCeeeeEee-cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc--------------ccc---cCCCCccEEEE
Q psy950 250 TLTAVPFKTV-SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS--------------SAS---SNLTNVVGVEF 311 (407)
Q Consensus 250 ~~~~~~~~~~-~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~--------------~~~---~~~~~~~glAv 311 (407)
... ++..+ .....+.++.+.+.++.++.+-... +.|...++.... ... +....|..+++
T Consensus 310 ~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 386 (430)
T 2xyi_A 310 LKL--KLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386 (430)
T ss_dssp TTS--CSEEEECCSSCEEEEEECSSCTTEEEEEETT-SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE
T ss_pred CCC--CeEEeecCCCCEEEEEECCCCCCEEEEEeCC-CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE
Confidence 111 11111 1234578899999888888887777 777777765411 111 22336889999
Q ss_pred eccCCeEEEEeCCCCCeEEEEECCC
Q psy950 312 DYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 312 Dwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
.+-+..++.+.+.. +.|.+.+++.
T Consensus 387 ~p~~~~~l~s~s~d-g~i~iw~~~~ 410 (430)
T 2xyi_A 387 NPNEPWIICSVSED-NIMQVWQMAE 410 (430)
T ss_dssp CSSSTTEEEEEETT-SEEEEEEECH
T ss_pred CCCCCCEEEEEECC-CCEEEeEccc
Confidence 88777677777777 7888877553
No 206
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=82.22 E-value=0.42 Score=41.07 Aligned_cols=40 Identities=28% Similarity=0.399 Sum_probs=29.8
Q ss_pred CCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccC-CCCcccc
Q psy950 181 NNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSAS-DPKKCTT 229 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~-d~~~C~~ 229 (407)
.+||. +++.|.+.|.+.++ +|+|.|+.||.+.+ |++.|..
T Consensus 96 ~~~C~--~~g~C~~~~~~~~g-------~~~C~C~~Gy~g~~~~~~~C~~ 136 (186)
T 1z1y_A 96 YXNCG--ESGECIVEYLSEIQ-------SAGCSCAIGXVPNPEDEXXCTX 136 (186)
T ss_dssp TCCCC--TTEEEEEEEETTEE-------EEEEEECTEEEEETTTTTEEEE
T ss_pred CCCCC--CCCEEeeCCcCCCC-------CceEECCCCCcccCCCCCcceE
Confidence 35665 36788877777665 69999999998655 7788863
No 207
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=82.13 E-value=31 Score=31.77 Aligned_cols=74 Identities=7% Similarity=-0.132 Sum_probs=50.9
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
...++++.|...+|+-.... ..|...+.+|.....+.. .......+++.+.+..|+.+. ..+.|...++.....
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN--GELRLWNKTGALLNVLNF-HRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGTV 183 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT--SCEEEEETTSCEEEEECC-CCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTEE
T ss_pred ceEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCeeeeccC-CCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCcE
Confidence 46899999987777766554 356666777765554432 334678999999877777665 467788888865443
No 208
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.04 E-value=36 Score=32.42 Aligned_cols=70 Identities=11% Similarity=0.132 Sum_probs=45.4
Q ss_pred CceeEEEeCCCCeEEEEeCCCCeEEEEecC---CCeEEEEc--cCCCCceEEEEeC--CEEEEEeCCCCeEEEEecCC
Q psy950 78 MPRDLTIDMQTHDVYWVDAKLDLIQKISYN---GGNRQIIR--RNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 78 ~P~glaiD~~~~~lYw~d~~~~~I~~~~~d---G~~~~~~~--~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~~ 148 (407)
...++++.+.++.||.+-...+.|...+++ |...+.+. .....+.++++.+ ..|+..+. .+.|...+...
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCC
Confidence 367899999988887777677888888776 34444443 2234567888865 35555543 45566665543
No 209
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.40 E-value=3.8 Score=41.59 Aligned_cols=65 Identities=5% Similarity=-0.082 Sum_probs=48.3
Q ss_pred CCCCcceEEEeCCCCEEEE-EEcCC----------CCeEEEEeCCCCCeEEEEeC-CCCCceeEEEeCCCCeEEEEeC
Q psy950 31 FRSANTTSPFSPLPRLLYW-IDYGQ----------YPRIGKSYLDGSKWTSIVSN-GISMPRDLTIDMQTHDVYWVDA 96 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lyw-td~~~----------~~~I~r~~~dG~~~~~l~~~-~~~~P~glaiD~~~~~lYw~d~ 96 (407)
.+..|-.|++|+. |.||+ ||... ...+++.+-+....+.++.. ....|+||++.+..+.||++--
T Consensus 474 ~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 474 MFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 3678999999987 88999 87531 22788888864444445542 3457999999999999999853
No 210
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.30 E-value=34 Score=31.63 Aligned_cols=99 Identities=9% Similarity=0.103 Sum_probs=63.3
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCc---eEEEEeCCCCc-ccc--c--CCCCccEEEEeccCCeEEEEeCCCCCeEEEEE
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWA---KIAWIPTTNPS-SAS--S--NLTNVVGVEFDYADDKILFTQIRPWAKIAWIP 333 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~---~I~~~~~~~~~-~~~--~--~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~ 333 (407)
...+.++.+.+.+..++.+-... + .|...++.... ... . ....+..+++.+..++++.+-... ++|.+.+
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d-~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g~v~~wd 291 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGS-DNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-NTVLLWN 291 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECC-SSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-SEEEEEC
T ss_pred CCceEEEEECCCCCCEEEEEECC-CCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-CCEEEee
Confidence 34577899998876666655544 4 78888877542 211 2 223678888887556666666666 7899998
Q ss_pred CCCCcc---cccCCCceeEEEEcCCCCeEEEE
Q psy950 334 TTNPSS---ASSNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 334 ~~~~~r---l~~~l~~P~~iavdp~~g~lywt 362 (407)
+..... +...-.....++..|....++.+
T Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 292 PESAEQLSQFPARGNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp SSSCCEEEEEECSSSCCCCEEECTTCTTEEEE
T ss_pred CCCCccceeecCCCCceEEEEECCCCCCEEEE
Confidence 876543 22233566788888876344444
No 211
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=81.26 E-value=29 Score=30.81 Aligned_cols=260 Identities=11% Similarity=0.060 Sum_probs=140.6
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCC----eEEEEe-CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSK----WTSIVS-NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN 107 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~----~~~l~~-~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d 107 (407)
....++++.|...+|+-.. ...|...+++... ...+.. ..-.....+++.+.++.|+.+. ..+.|...+++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~ 127 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG---KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLA 127 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC---BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECC
T ss_pred CceEEEEEecCCcEEEEcC---CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECC
Confidence 3468999999887777665 2478888876443 122221 2234578999999777666654 46788888887
Q ss_pred CCeEE---EEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCC
Q psy950 108 GGNRQ---IIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNP 183 (407)
Q Consensus 108 G~~~~---~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~ 183 (407)
..... .+.........+++.+ +..+.+-...+.|...+... + .... .+. .
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-~--~~~~-------------~~~-------~--- 181 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-Q--TLVR-------------QFQ-------G--- 181 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-T--EEEE-------------EEC-------C---
T ss_pred CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-C--ceee-------------eee-------c---
Confidence 65532 2223344456777765 33333333344555555443 1 1111 110 0
Q ss_pred ccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceEEeecCCCCCeeeeEeecCC
Q psy950 184 CFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIRALHLDPTLTAVPFKTVSNL 262 (407)
Q Consensus 184 C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~~i~l~~~~~~~~~~~~~~~ 262 (407)
..+....+++ .| ++. +|+.+. ...|.-..+.... ........
T Consensus 182 ----~~~~i~~~~~----------------~~-------~~~-------~l~~~~~dg~i~~~d~~~~~---~~~~~~~~ 224 (337)
T 1gxr_A 182 ----HTDGASCIDI----------------SN-------DGT-------KLWTGGLDNTVRSWDLREGR---QLQQHDFT 224 (337)
T ss_dssp ----CSSCEEEEEE----------------CT-------TSS-------EEEEEETTSEEEEEETTTTE---EEEEEECS
T ss_pred ----ccCceEEEEE----------------CC-------CCC-------EEEEEecCCcEEEEECCCCc---eEeeecCC
Confidence 0011111111 11 110 111111 1223333332211 11112233
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCccc
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSA 340 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~rl 340 (407)
..+.++.+.+.++.++..... +.|...++....... .....+.++++.+-++.|+.... . +.|.+.++.....+
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~--~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMES--SNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK-D-NLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEET-T-SEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEcCC--CcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecC-C-CcEEEEECCCCeEE
Confidence 456788888888887766543 458888877655433 22337889999887776655444 4 68999998766542
Q ss_pred --ccCCCceeEEEEcCCCCeEEEEe
Q psy950 341 --SSNLTNVVGVEFDYADDKILFTQ 363 (407)
Q Consensus 341 --~~~l~~P~~iavdp~~g~lywtd 363 (407)
...-..+.++++.|...+|+-..
T Consensus 301 ~~~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 301 FQSKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEE
T ss_pred EEecCCCcEEEEEECCCCCEEEEec
Confidence 23446778888888776665543
No 212
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.91 E-value=54 Score=33.70 Aligned_cols=94 Identities=14% Similarity=0.017 Sum_probs=63.5
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
-....+++++|...+|..+... ..|...++........+...-.....++..+.++.|..+.. .+.|...+++....
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~--g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYS--GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGEK 89 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETT--SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-TSEEEEEETTTCCE
T ss_pred CCceEEEEECCCCCEEEEEeCC--CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcE
Confidence 4567999999998888877643 47888887644333333333346789999998888777764 67888888864443
Q ss_pred -EEEccCCCCceEEEEeC
Q psy950 112 -QIIRRNLPNPMGIAVHK 128 (407)
Q Consensus 112 -~~~~~~~~~P~~lav~~ 128 (407)
..+.........+++.+
T Consensus 90 ~~~~~~~~~~v~~~~~s~ 107 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAVHP 107 (814)
T ss_dssp EEEEECCSSCEEEEEECS
T ss_pred EEEEecCCCCEEEEEEeC
Confidence 44444444566777765
No 213
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=80.35 E-value=1.2 Score=36.00 Aligned_cols=32 Identities=25% Similarity=0.703 Sum_probs=23.3
Q ss_pred CCCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCcc
Q psy950 180 ENNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTP 219 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~ 219 (407)
..++|.. ....|.+ .|++.++ +|+|.|+.||.
T Consensus 4 dideC~~-~~~~C~~~g~C~~~~g-------~~~C~C~~Gy~ 37 (135)
T 2vj3_A 4 DVDECSL-GANPCEHAGKCINTLG-------SFECQCLQGYT 37 (135)
T ss_dssp CCCTTTS-SSCSSSTTCEEEECSS-------SEEEECCTTEE
T ss_pred ccccccC-CCCCCCCCCEeECCCC-------CEEEECCCCCc
Confidence 3466764 3456765 7888765 59999999997
No 214
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=79.85 E-value=1 Score=37.12 Aligned_cols=35 Identities=29% Similarity=0.659 Sum_probs=23.4
Q ss_pred CCCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. ..|.+ .|++.++ +|+|.|+.||. |..|.
T Consensus 47 dideC~~---~pC~n~g~C~~~~~-------~y~C~C~~G~~----G~~C~ 83 (146)
T 1x7a_L 47 DGDQCEP---NPCLNGGLCKDDIN-------SYECWCQVGFE----GKNCE 83 (146)
T ss_dssp ---CCSS---CSSCTTCEEEECSS-------CEEEECCSSEE----STTTC
T ss_pred CcCcCCC---CCCCCCCEeECCCC-------CEEEecCCCCc----CCcCC
Confidence 3456653 34554 7888765 59999999997 66775
No 215
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=79.80 E-value=41 Score=31.89 Aligned_cols=98 Identities=7% Similarity=0.025 Sum_probs=65.0
Q ss_pred CcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc-----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCC
Q psy950 262 LTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS-----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~-----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
...+.+|.|.+.+..++++-... +.|...++.+..... .....+..+++++-++.|+-. ... +.|.+.++++
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~d-g~i~~wd~~~ 240 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSME-GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTG-DNV-GNVILLNMDG 240 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSS-SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEE-CSS-SBEEEEESSS
T ss_pred CCCEEEEEEeCCCCCEEEEEeCC-CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEE-eCC-CcEeeeccCc
Confidence 34578899998766555665555 678888887654322 222256788888766655444 444 6899999877
Q ss_pred Ccc--cccCCCceeEEEEcCCCCeEEEE
Q psy950 337 PSS--ASSNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 337 ~~r--l~~~l~~P~~iavdp~~g~lywt 362 (407)
... +...-....+|+++|....++.+
T Consensus 241 ~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 241 KELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp CBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred ceeEEEecccceEEeeeecCCCceEEEE
Confidence 542 22234677899999988777665
No 216
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=79.77 E-value=0.56 Score=32.60 Aligned_cols=18 Identities=28% Similarity=0.626 Sum_probs=14.8
Q ss_pred cceecCCCCCCCCcceEEecCCCcc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTP 219 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~ 219 (407)
.|.+.++ +|+|.|+.||.
T Consensus 26 tC~~~~g-------~y~C~C~~Gy~ 43 (61)
T 2k2s_B 26 TCKETNS-------GYICRCNQGYR 43 (61)
T ss_dssp EEEECSS-------EEEEECCTTEE
T ss_pred ccccCCC-------ceEeECCCCCc
Confidence 5777665 69999999996
No 217
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=79.39 E-value=0.69 Score=30.83 Aligned_cols=16 Identities=38% Similarity=1.028 Sum_probs=13.7
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 32 ~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 32 VYSCECAIGFM----GQRCE 47 (52)
T ss_dssp EEEEECCTTEE----STTSC
T ss_pred CEEEECCCCCc----CCCCc
Confidence 69999999998 77775
No 218
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=78.77 E-value=1 Score=36.92 Aligned_cols=35 Identities=20% Similarity=0.590 Sum_probs=25.7
Q ss_pred CCCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. ..|.+ .|++..+ +|+|.|+.||. |..|.
T Consensus 46 did~C~~---~pC~n~g~C~~~~g-------~y~C~C~~G~~----G~~C~ 82 (142)
T 2c4f_L 46 DGDQCAS---SPCQNGGSCKDQLQ-------SYICFCLPAFE----GRNCE 82 (142)
T ss_dssp TCCGGGG---CCCCTTCEEEEETT-------EEEEECCTTEE----STTSC
T ss_pred ccCcCcC---CCcCCCCEEeCCCC-------CEEeeCCCCcc----CCccc
Confidence 3566754 45665 7888765 69999999996 67775
No 219
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=78.01 E-value=1.3 Score=45.60 Aligned_cols=33 Identities=15% Similarity=0.348 Sum_probs=26.5
Q ss_pred CCCCccCCCcccccc-----cceecCCCCCCCCcceEEe-cCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ-----LCFSYPVEFPQNKLHYKCD-CATGTPS 220 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~-----lC~~~~~~~~~~~~~~~C~-C~~G~~l 220 (407)
..++|.. +.+.|.+ .|++.++ +|+|. |+.||..
T Consensus 43 DiDEC~~-~p~~C~~gg~~~~CvNt~g-------sY~C~~C~~Gy~G 81 (634)
T 1yo8_A 43 DLDECAL-VPDICFSTSKVPRCVNTQP-------GFHCLPCPPRYRG 81 (634)
T ss_dssp BCCTTTT-SCCCSCCCSSSCCEEECSS-------SEEECCCCTTEEE
T ss_pred ccccccC-CCCcccCCccccceeeccC-------ceecccCCCCccc
Confidence 5688976 5667876 8998876 59999 9999974
No 220
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.82 E-value=20 Score=36.48 Aligned_cols=64 Identities=17% Similarity=0.122 Sum_probs=43.9
Q ss_pred CCCCcceEEEeCCCCEEEEEEcCC--------------------CCeEEEEeCCCCCe-------EEEEe----------
Q psy950 31 FRSANTTSPFSPLPRLLYWIDYGQ--------------------YPRIGKSYLDGSKW-------TSIVS---------- 73 (407)
Q Consensus 31 ~~~~P~~iavdp~~g~lywtd~~~--------------------~~~I~r~~~dG~~~-------~~l~~---------- 73 (407)
.+++|.+|+++|..|.+|++-... ...|.|...++... ..++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 467899999999999999985431 24788887654321 12221
Q ss_pred -----------CCCCCceeEEEeCCCCeEEEEe
Q psy950 74 -----------NGISMPRDLTIDMQTHDVYWVD 95 (407)
Q Consensus 74 -----------~~~~~P~glaiD~~~~~lYw~d 95 (407)
..+..|..|++|+.+ +|+.+.
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G-~LwI~e 493 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAG-RLWILT 493 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTC-CEEEEE
T ss_pred ccccccccCCCCCccCCcceEECCCC-CEEEEe
Confidence 125579999999964 566654
No 221
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=77.47 E-value=1.1 Score=46.03 Aligned_cols=43 Identities=30% Similarity=0.633 Sum_probs=29.2
Q ss_pred CCCCccCCCccccc--ccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCE--QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs--~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. +++.|. ..|++.+.. ..++|+|.|+.||. .+++.|.
T Consensus 101 dideC~~-~~~pC~~~~~Cvnt~~~---~~GsY~C~C~~Gy~--GdG~~Ce 145 (634)
T 1yo8_A 101 PENPCKD-KTHNCHKHAECIYLGHF---SDPMYKCECQTGYA--GDGLICG 145 (634)
T ss_dssp ECCTTTT-TCCCCCTTEEEEECCTT---CSSSEEEEECTTEE--ESSSSEE
T ss_pred ccccccC-CCcccccCccccccccc---cccceeeeccCCcc--ccCcccc
Confidence 3578876 556886 689988710 01269999999997 3556663
No 222
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=76.94 E-value=57 Score=31.78 Aligned_cols=259 Identities=12% Similarity=0.105 Sum_probs=137.9
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEE
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ 112 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~ 112 (407)
....++++.|....|.-.... ..|...+.+|.....+. .......++++.+.+..|.-+ ...+.|..-++++....
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d--~~i~~w~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~-~~d~~i~~w~~~~~~~~ 338 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDD--KTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQHLQ 338 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEETTSCEEEEEC-CCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSCEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCC--CEEEEEeCCCcEEEEEe-cCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeeE
Confidence 346889999887766655443 36777777776544433 223456789999876666544 35677888888888776
Q ss_pred EEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCccc
Q psy950 113 IIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGG 191 (407)
Q Consensus 113 ~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~ 191 (407)
.+........++++.. +....+-...+.|...+..+ .....+. .+ .+.
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~----~~~~~~~--------------------~~-------~~~ 387 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG----QLLQTLT--------------------GH-------SSS 387 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC----CEEEEEE--------------------CC-------SSC
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC----CEEEEec--------------------CC-------CCC
Confidence 6655455667777765 33333323333443333221 0010000 00 001
Q ss_pred ccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecc-cceEEeecCCCCCeeeeEeecCCcceEEEEE
Q psy950 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR-TEIRALHLDPTLTAVPFKTVSNLTNVVGVEF 270 (407)
Q Consensus 192 Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~-~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~ 270 (407)
...+++ .+|++ +|+.+.. ..|+-...... ...........+.+++|
T Consensus 388 v~~~~~-----------------------s~dg~-------~l~~~~~d~~v~~~~~~~~---~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 388 VRGVAF-----------------------SPDGQ-------TIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EEEEEE-----------------------CTTSS-------CEEEEETTSEEEEECTTCC---EEEEEECCSSCEEEEEE
T ss_pred eEEEEE-----------------------CCCCC-------EEEEEeCCCEEEEEeCCCC---EEEEecCCCCCeEEEEE
Confidence 111111 12221 1111111 11111111110 00111112345678888
Q ss_pred EcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--cccCCCc
Q psy950 271 DYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--ASSNLTN 346 (407)
Q Consensus 271 d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l~~~l~~ 346 (407)
.+.++.|..... . +.|...+.++..... +....+..|++.+.++.|.-... . +.|.+-+.++... +...-..
T Consensus 435 s~d~~~l~~~~~-d-~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~-d-~~i~iw~~~~~~~~~~~~h~~~ 510 (577)
T 2ymu_A 435 SPDDQTIASASD-D-KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD-D-KTVKLWNRNGQLLQTLTGHSSS 510 (577)
T ss_dssp CTTSSEEEEEET-T-SEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEET-T-SEEEEEETTSCEEEEEECCSSC
T ss_pred CCCCCEEEEEcC-C-CEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-C-CEEEEEcCCCCEEEEEeCCCCC
Confidence 887777655443 3 567777776643332 33337889999987776665544 3 5898888776532 3233467
Q ss_pred eeEEEEcCCCCeEEEEe
Q psy950 347 VVGVEFDYADDKILFTQ 363 (407)
Q Consensus 347 P~~iavdp~~g~lywtd 363 (407)
...|++.|...+|.-..
T Consensus 511 v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASAS 527 (577)
T ss_dssp EEEEEECTTSSCEEEEE
T ss_pred EEEEEEcCCCCEEEEEE
Confidence 78999999776665443
No 223
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=76.37 E-value=32 Score=31.81 Aligned_cols=111 Identities=5% Similarity=-0.114 Sum_probs=67.6
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEE
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII 114 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~ 114 (407)
+.++++.|..+.++.+-... ..|...++..................|++.+.++++..+-...++|..-+++.......
T Consensus 229 v~~v~~sp~~~~~la~g~~d-~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDET-GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EEEEEECTTSTTEEEEEESS-SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred ccchhhhhcccceEEEeecc-cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 67899999888777664333 36777777544333233322345688999887766665555667888888876554333
Q ss_pred ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEec
Q psy950 115 RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASK 146 (407)
Q Consensus 115 ~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~ 146 (407)
...-....+|++.+ +.++.+-...+.|..-+.
T Consensus 308 ~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 308 LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 33334457788753 445555444555554443
No 224
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=76.21 E-value=60 Score=31.64 Aligned_cols=258 Identities=12% Similarity=0.069 Sum_probs=136.6
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEE
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQ 112 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~ 112 (407)
....++++.|...+|.-.... ..|..-+.+|.....+. .....+.++++.+.+..|.-+. ..+.|...+.+|...+
T Consensus 222 ~~v~~~~~s~dg~~l~~~~~d--~~i~~w~~~~~~~~~~~-~~~~~v~~v~~~~d~~~l~~~~-~d~~i~~w~~~~~~~~ 297 (577)
T 2ymu_A 222 SSVRGVAFSPDGQTIASASDD--KTVKLWNRNGQLLQTLT-GHSSSVNGVAFRPDGQTIASAS-DDKTVKLWNRNGQLLQ 297 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETT--SCEEEECTTSCEEEEEC-CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSCEEE
T ss_pred CCEEEEEECCCCCEEEEEeCC--CEEEEEeCCCCEEEEEe-cCCCCEEEEEEcCCCCEEEEEe-CCCEEEEEeCCCcEEE
Confidence 346899999987777655443 36777777776544433 2234678999998766665554 4567888888887766
Q ss_pred EEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCccc
Q psy950 113 IIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGG 191 (407)
Q Consensus 113 ~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~ 191 (407)
.+........++++.+ +....+-...+.|..-+..+ .....+. .+ ...
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~----~~~~~~~--------------------~~-------~~~ 346 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG----QHLQTLT--------------------GH-------SSS 346 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS----CEEEEEC--------------------CC-------SSC
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC----CeeEEEe--------------------CC-------CCC
Confidence 6655455567777765 33333333334444333332 0111100 00 000
Q ss_pred ccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecc-cceEEeecCCCCCeeeeEeecCCcceEEEEE
Q psy950 192 CEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR-TEIRALHLDPTLTAVPFKTVSNLTNVVGVEF 270 (407)
Q Consensus 192 Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~-~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~ 270 (407)
-.|.+ +.+|++ +|+.... ..++-...... ...........+.+++|
T Consensus 347 ------------------v~~~~-----~s~~g~-------~l~~~~~dg~v~~~~~~~~---~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 347 ------------------VWGVA-----FSPDGQ-------TIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp ------------------EEEEE-----ECTTSS-------EEEEEETTSEEEEEETTCC---EEEEEECCSSCEEEEEE
T ss_pred ------------------EEEEE-----ECCCCC-------EEEEEeCCCEEEEEcCCCC---EEEEecCCCCCeEEEEE
Confidence 01110 011111 1111111 11211111111 00001112345678888
Q ss_pred EcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc--cccCCCc
Q psy950 271 DYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS--ASSNLTN 346 (407)
Q Consensus 271 d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r--l~~~l~~ 346 (407)
.+.++.|..... . +.|...+.++..... +....+.+|++.+.++.|.-... . ++|.+.+.++... +...-..
T Consensus 394 s~dg~~l~~~~~-d-~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-d-~~v~~w~~~~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 394 SPDGQTIASASD-D-KTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASD-D-KTVKLWNRNGQLLQTLTGHSSS 469 (577)
T ss_dssp CTTSSCEEEEET-T-SEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET-T-SEEEEEETTSCEEEEEECCSSC
T ss_pred CCCCCEEEEEeC-C-CEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcC-C-CEEEEEECCCCEEEEEcCCCCC
Confidence 887777655443 3 457767666543222 33337889999887776655443 4 5788888776532 3334467
Q ss_pred eeEEEEcCCCCeEEEE
Q psy950 347 VVGVEFDYADDKILFT 362 (407)
Q Consensus 347 P~~iavdp~~g~lywt 362 (407)
+..+++.|...+|.-.
T Consensus 470 v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASA 485 (577)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEE
Confidence 7889999876655443
No 225
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=75.05 E-value=80 Score=32.50 Aligned_cols=122 Identities=9% Similarity=0.091 Sum_probs=76.4
Q ss_pred eEEEcCCCCCc---ceEEEeCCCCEEEEEEcC---CCCeEEEEeCCCC--C-eEEEEeCCCCCceeEEEeCCCCeEEEEe
Q psy950 25 KKLKTSFRSAN---TTSPFSPLPRLLYWIDYG---QYPRIGKSYLDGS--K-WTSIVSNGISMPRDLTIDMQTHDVYWVD 95 (407)
Q Consensus 25 ~~l~~~~~~~P---~~iavdp~~g~lywtd~~---~~~~I~r~~~dG~--~-~~~l~~~~~~~P~glaiD~~~~~lYw~d 95 (407)
.+++...-+.| .++++.|...+|+++... ....|+..++++. . .+.|... ....... +++.+++||+..
T Consensus 257 ~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~-~~~dg~~l~~~s 334 (741)
T 1yr2_A 257 DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-LKAQWDF-VDGVGDQLWFVS 334 (741)
T ss_dssp CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS-SSSCEEE-EEEETTEEEEEE
T ss_pred CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC-CCceEEE-EeccCCEEEEEE
Confidence 35555544433 588899998888887653 2358999999876 4 4555432 2222222 456788898875
Q ss_pred CC---CCeEEEEecCCC--eEEEEc-cCCCCceEEEEeCCEEEEEeCCCC--eEEEEecCC
Q psy950 96 AK---LDLIQKISYNGG--NRQIIR-RNLPNPMGIAVHKSDVYWVDRNLR--TVYKASKLA 148 (407)
Q Consensus 96 ~~---~~~I~~~~~dG~--~~~~~~-~~~~~P~~lav~~~~lYwtd~~~~--~I~~~~~~~ 148 (407)
.. ...|..+++++. ..+.+. ..-....++++++++++++....+ .|+..+..+
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTS
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 42 467999999873 444443 222234467788899998876554 566666543
No 226
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=74.96 E-value=78 Score=32.36 Aligned_cols=121 Identities=7% Similarity=-0.021 Sum_probs=76.3
Q ss_pred eEEEcCCCC-Cc---ceEEEeCCCCEEEEEEcC--CCCeEEEEeCCCC--CeEEEEeCCCCCceeEEEeCCCCeEEEEeC
Q psy950 25 KKLKTSFRS-AN---TTSPFSPLPRLLYWIDYG--QYPRIGKSYLDGS--KWTSIVSNGISMPRDLTIDMQTHDVYWVDA 96 (407)
Q Consensus 25 ~~l~~~~~~-~P---~~iavdp~~g~lywtd~~--~~~~I~r~~~dG~--~~~~l~~~~~~~P~glaiD~~~~~lYw~d~ 96 (407)
.+++...-+ .| .++++.|..++|+++... ....|+..++++. ..+.|... ...-.. .+++.+++||+...
T Consensus 222 ~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~-~~~~~~-~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 222 DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD-LDADVS-LVDNKGSTLYLLTN 299 (693)
T ss_dssp CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-SSSCEE-EEEEETTEEEEEEC
T ss_pred ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-CCceEE-EEeccCCEEEEEEC
Confidence 345544433 33 578899999999887642 2238999998765 34444432 221112 25666889888754
Q ss_pred C---CCeEEEEecCCCeE---EEEc-cCCCCceEEEEeCCEEEEEeCCCC--eEEEEecCC
Q psy950 97 K---LDLIQKISYNGGNR---QIIR-RNLPNPMGIAVHKSDVYWVDRNLR--TVYKASKLA 148 (407)
Q Consensus 97 ~---~~~I~~~~~dG~~~---~~~~-~~~~~P~~lav~~~~lYwtd~~~~--~I~~~~~~~ 148 (407)
. ..+|..+++++... +.+. ...... +++.++++|+++....+ .|...+..+
T Consensus 300 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 300 RDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred CCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 3 47899999987553 4443 222233 88888999988876554 566776654
No 227
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=73.91 E-value=2 Score=34.88 Aligned_cols=36 Identities=25% Similarity=0.551 Sum_probs=25.4
Q ss_pred CCCCccCCCc-cccc--ccceecCCCCCCCCcceEEecCCCccccCC
Q psy950 180 ENNPCFRTGN-GGCE--QLCFSYPVEFPQNKLHYKCDCATGTPSASD 223 (407)
Q Consensus 180 ~~n~C~~~~n-g~Cs--~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d 223 (407)
..++|.. .+ ..|. +.|++.++ +|+|.|+.||.+..+
T Consensus 43 dideC~~-~~~~~C~~~~~C~n~~g-------~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 43 DINECAT-LSKVSCGKFSDCWNTEG-------SYDCVCSPGYEPVSG 81 (143)
T ss_dssp ECCGGGC-----CCCTTEEEEECSS-------CEEEEECTTEEETTC
T ss_pred ccccccC-CCCCCCCCCCEEEcCCC-------CeEeECCCCcccCcC
Confidence 3577765 32 2676 68998876 599999999986654
No 228
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=73.24 E-value=0.7 Score=40.23 Aligned_cols=35 Identities=26% Similarity=0.666 Sum_probs=0.0
Q ss_pred CCCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..++|.. ..|.+ .|++..+ +|+|.|+.||. |..|.
T Consensus 41 dideC~~---~pC~ngg~C~n~~g-------~y~C~C~~Gf~----G~~Ce 77 (195)
T 1nfu_B 41 DGDQCET---SPCQNQGKCKDGLG-------EYTCTCLEGFE----GKNCE 77 (195)
T ss_dssp ---------------------------------------------------
T ss_pred CCcccCC---CCCCCCCEeECCCC-------CeeEeCCCCce----ecccc
Confidence 3466653 45655 7887765 69999999997 66675
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=72.58 E-value=89 Score=31.93 Aligned_cols=90 Identities=12% Similarity=0.167 Sum_probs=55.5
Q ss_pred EEcCCCEEEEEEecC--CceEEEEeCCCCcc---cc---cCCCCccEEEEeccCCeEEEEeCCCC-CeEEEEECCCCcc-
Q psy950 270 FDYADDKILFTQIRP--WAKIAWIPTTNPSS---AS---SNLTNVVGVEFDYADDKILFTQIRPW-AKIAWIPTTNPSS- 339 (407)
Q Consensus 270 ~d~~~~~lywsd~~~--~~~I~~~~~~~~~~---~~---~~~~~~~glAvDwi~~~LYwtd~~~~-~~I~v~~~~~~~r- 339 (407)
+++.++++|+..... ..+|.++++++... .. .-. .+. ++.+.++.|+++-.... .+|.+++++|...
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~ 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ-QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVR 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-CEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeE
Confidence 456688888875432 26799999987643 11 222 222 67777999988754430 3688888887642
Q ss_pred -cc-cCCCceeEEEEcCCCCeEEEE
Q psy950 340 -AS-SNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 340 -l~-~~l~~P~~iavdp~~g~lywt 362 (407)
+. .......++..+|....|+++
T Consensus 364 ~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp EECCSSSSEEEECCCCTTCSCEEEE
T ss_pred EeecCCCceEEeeecCCCCCEEEEE
Confidence 22 233344566666666777665
No 230
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=72.15 E-value=90 Score=31.79 Aligned_cols=120 Identities=7% Similarity=-0.005 Sum_probs=71.5
Q ss_pred eEEEcCCCCC---cceEEEeCCCCEEEEEEcCC--CCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeC---
Q psy950 25 KKLKTSFRSA---NTTSPFSPLPRLLYWIDYGQ--YPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDA--- 96 (407)
Q Consensus 25 ~~l~~~~~~~---P~~iavdp~~g~lywtd~~~--~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~--- 96 (407)
.+++...-+. -.++++.|...+|+++.... ...|+..+..+...+.|.... ......+ .+.++ ||+...
T Consensus 216 ~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~~~-~~~g~-l~~~s~~~~ 292 (695)
T 2bkl_A 216 DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV-GAKYEVH-AWKDR-FYVLTDEGA 292 (695)
T ss_dssp CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS-SCCEEEE-EETTE-EEEEECTTC
T ss_pred ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC-CceEEEE-ecCCc-EEEEECCCC
Confidence 3455544333 35889999999998876532 347777766555555555432 2222222 34455 777643
Q ss_pred CCCeEEEEecCCCe----EEEEccC-CCCceEEEEeCCEEEEEeCCCC--eEEEEecC
Q psy950 97 KLDLIQKISYNGGN----RQIIRRN-LPNPMGIAVHKSDVYWVDRNLR--TVYKASKL 147 (407)
Q Consensus 97 ~~~~I~~~~~dG~~----~~~~~~~-~~~P~~lav~~~~lYwtd~~~~--~I~~~~~~ 147 (407)
...+|..+++++.. +.++... .....++++++++++++....+ .|...+..
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 35789999997654 3333322 2334667888888888865544 45555543
No 231
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=71.70 E-value=92 Score=31.75 Aligned_cols=114 Identities=4% Similarity=-0.087 Sum_probs=73.2
Q ss_pred cceEEEeCCCCEEEEEEcCC--------------CCeEEEEeCCCCCe-EEEEeCC---CCCceeEEEeCCCCeEEEEeC
Q psy950 35 NTTSPFSPLPRLLYWIDYGQ--------------YPRIGKSYLDGSKW-TSIVSNG---ISMPRDLTIDMQTHDVYWVDA 96 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~--------------~~~I~r~~~dG~~~-~~l~~~~---~~~P~glaiD~~~~~lYw~d~ 96 (407)
..+++..|....||++.... ..+|.+.++++... ..++... -....++++.+.++.|+++-.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 46799999988999886532 23599999975442 2333222 223568999999999888753
Q ss_pred -C---CCeEEEEecCC------C--eEEEEc-cCCCCceEEEEeCCEEEEEeCC---CCeEEEEecCC
Q psy950 97 -K---LDLIQKISYNG------G--NRQIIR-RNLPNPMGIAVHKSDVYWVDRN---LRTVYKASKLA 148 (407)
Q Consensus 97 -~---~~~I~~~~~dG------~--~~~~~~-~~~~~P~~lav~~~~lYwtd~~---~~~I~~~~~~~ 148 (407)
. ...|..+++++ . ..+.+. ........++-++++||+.... ...|+.++..+
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 2 56899999875 3 233333 2222223345567888887643 33788888765
No 232
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=71.01 E-value=63 Score=29.55 Aligned_cols=132 Identities=10% Similarity=-0.060 Sum_probs=0.0
Q ss_pred EeeeeecCCcceEEEc--CCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCC--CCceeEEEeCCCC
Q psy950 14 IRLALRLLKKKKKLKT--SFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGI--SMPRDLTIDMQTH 89 (407)
Q Consensus 14 ~~~~~~~~~~~~~l~~--~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~--~~P~glaiD~~~~ 89 (407)
+++...........+. .--....++++.|..+.++.+-.... .|...++.+.....+..... .....+++.+.+.
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 176 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG-ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQ 176 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT-EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTT
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC-EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCC
Q ss_pred eEEEEeCCCCeEEEEecCCCeEEEEccCCCCceEEEEeC-CE-EEEEeCCCCeEEEEecC
Q psy950 90 DVYWVDAKLDLIQKISYNGGNRQIIRRNLPNPMGIAVHK-SD-VYWVDRNLRTVYKASKL 147 (407)
Q Consensus 90 ~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~-~~-lYwtd~~~~~I~~~~~~ 147 (407)
.|+.+... +.|...++++.....+........++++.+ +. ++.+-...+.|...+..
T Consensus 177 ~l~~~~~d-~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 177 MLATGDST-GRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp EEEEEETT-SEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred EEEEECCC-CCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
No 233
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=70.94 E-value=67 Score=29.82 Aligned_cols=257 Identities=8% Similarity=-0.026 Sum_probs=137.9
Q ss_pred EeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCC-CCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-EEEccC
Q psy950 40 FSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNG-ISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QIIRRN 117 (407)
Q Consensus 40 vdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~-~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~~~~~ 117 (407)
+++..+.++-...+ ..|...+++......+.... -.....+++.+.+..|+.+. ..+.|...++..... ..+...
T Consensus 99 ~~~s~~~l~~~~~d--~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~ 175 (401)
T 4aez_A 99 LDWSNLNVVAVALE--RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQTKLRTMAGH 175 (401)
T ss_dssp EEECTTSEEEEEET--TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCC
T ss_pred EeecCCCEEEEECC--CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCCeEEEEecCC
Confidence 44444555544332 37888888766655555432 34578999999777666665 457888888765443 444444
Q ss_pred CCCceEEEEeCCEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCcccccccce
Q psy950 118 LPNPMGIAVHKSDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGNGGCEQLCF 197 (407)
Q Consensus 118 ~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs~lC~ 197 (407)
......+++.++.++-. ...+.|...+... .. ... ..+.... +....+++
T Consensus 176 ~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~-~~-~~~-------------~~~~~~~--------------~~v~~~~~ 225 (401)
T 4aez_A 176 QARVGCLSWNRHVLSSG-SRSGAIHHHDVRI-AN-HQI-------------GTLQGHS--------------SEVCGLAW 225 (401)
T ss_dssp SSCEEEEEEETTEEEEE-ETTSEEEEEETTS-SS-CEE-------------EEEECCS--------------SCEEEEEE
T ss_pred CCceEEEEECCCEEEEE-cCCCCEEEEeccc-Cc-cee-------------eEEcCCC--------------CCeeEEEE
Confidence 44556677755544443 3344555555442 00 000 0110000 00011111
Q ss_pred ecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec-ccceEEeecCCCCCeeeeEee-cCCcceEEEEEEcCCC
Q psy950 198 SYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST-RTEIRALHLDPTLTAVPFKTV-SNLTNVVGVEFDYADD 275 (407)
Q Consensus 198 ~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ald~d~~~~ 275 (407)
.+++. +|+.+. ...|+-..+.... +...+ .....+.++++.+.+.
T Consensus 226 -----------------------~~~~~-------~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~p~~~ 272 (401)
T 4aez_A 226 -----------------------RSDGL-------QLASGGNDNVVQIWDARSSI---PKFTKTNHNAAVKAVAWCPWQS 272 (401)
T ss_dssp -----------------------CTTSS-------EEEEEETTSCEEEEETTCSS---EEEEECCCSSCCCEEEECTTST
T ss_pred -----------------------cCCCC-------EEEEEeCCCeEEEccCCCCC---ccEEecCCcceEEEEEECCCCC
Confidence 01110 111111 1223333332211 11111 2234466788888777
Q ss_pred EEEEEEe--cCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc-----cccCCCc
Q psy950 276 KILFTQI--RPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS-----ASSNLTN 346 (407)
Q Consensus 276 ~lywsd~--~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r-----l~~~l~~ 346 (407)
.++.+-. .. +.|...++....... .....+..+++.+.++.|+.+.....+.|.+.++..... +......
T Consensus 273 ~ll~~~~gs~d-~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 273 NLLATGGGTMD-KQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp TEEEEECCTTT-CEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CEEEEecCCCC-CEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 7777654 45 678888877654433 233378899999988888887643227899988776432 2224467
Q ss_pred eeEEEEcCCCCeEEEEe
Q psy950 347 VVGVEFDYADDKILFTQ 363 (407)
Q Consensus 347 P~~iavdp~~g~lywtd 363 (407)
...++++|...+|+-..
T Consensus 352 v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 352 VLYSALSPDGRILSTAA 368 (401)
T ss_dssp CCEEEECTTSSEEEEEC
T ss_pred EEEEEECCCCCEEEEEe
Confidence 78889998766665543
No 234
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=70.64 E-value=2 Score=43.89 Aligned_cols=17 Identities=59% Similarity=1.198 Sum_probs=14.8
Q ss_pred ceEEecC-CCccccCCCCcccc
Q psy950 209 HYKCDCA-TGTPSASDPKKCTT 229 (407)
Q Consensus 209 ~~~C~C~-~G~~l~~d~~~C~~ 229 (407)
+|.|.|+ .||. |+.|..
T Consensus 22 ~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 22 QYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp EEEEECTTSSEE----TTTTCE
T ss_pred CeEEecCCCCcc----CCCCCC
Confidence 6999999 9997 889973
No 235
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=70.18 E-value=3.1 Score=27.53 Aligned_cols=17 Identities=24% Similarity=0.639 Sum_probs=14.4
Q ss_pred ceEEecCCCccccCCCCcccc
Q psy950 209 HYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~~ 229 (407)
.+.|.|+.||. |..|..
T Consensus 29 ~~~C~C~~gy~----G~RCe~ 45 (50)
T 3e50_C 29 KPACVCHSGYV----GARCEH 45 (50)
T ss_pred CeEEECCCCCc----ccCCCc
Confidence 68999999998 888853
No 236
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=70.07 E-value=1.6 Score=29.79 Aligned_cols=16 Identities=38% Similarity=1.028 Sum_probs=14.1
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|.|.|+.||. |..|.
T Consensus 32 ~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 32 VYSCECAIGFM----GQRCE 47 (58)
T ss_dssp EEEEEECTTEE----SSSSC
T ss_pred CEEeECCCCCc----cCCCc
Confidence 68999999997 88886
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=69.86 E-value=60 Score=28.84 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=64.9
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEE
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII 114 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~ 114 (407)
..++++|+. |.||....+ ..|.+.+.+|....... ........+++|. .++||++. +.|...+.+|......
T Consensus 139 ~~~~~~~~~-g~l~vgt~~--~~l~~~d~~g~~~~~~~-~~~~~~~~~~~d~-~g~l~v~t---~~l~~~d~~g~~~~~~ 210 (330)
T 3hxj_A 139 YATPIVSED-GTIYVGSND--NYLYAINPDGTEKWRFK-TNDAITSAASIGK-DGTIYFGS---DKVYAINPDGTEKWNF 210 (330)
T ss_dssp CSCCEECTT-SCEEEECTT--SEEEEECTTSCEEEEEE-CSSCCCSCCEECT-TCCEEEES---SSEEEECTTSCEEEEE
T ss_pred eeeeEEcCC-CEEEEEcCC--CEEEEECCCCCEeEEEe-cCCCceeeeEEcC-CCEEEEEe---CEEEEECCCCcEEEEE
Confidence 356677764 566665432 47888888854433322 2233456778876 46688777 7888888767655444
Q ss_pred ccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 115 RRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 115 ~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
........+++++. +.||.... .+.|.+.+..
T Consensus 211 ~~~~~~~~~~~~~~~g~l~v~t~-~~gl~~~~~~ 243 (330)
T 3hxj_A 211 YAGYWTVTRPAISEDGTIYVTSL-DGHLYAINPD 243 (330)
T ss_dssp CCSSCCCSCCEECTTSCEEEEET-TTEEEEECTT
T ss_pred ccCCcceeceEECCCCeEEEEcC-CCeEEEECCC
Confidence 33345567778886 47777654 4567777644
No 238
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=69.46 E-value=74 Score=32.73 Aligned_cols=114 Identities=16% Similarity=0.257 Sum_probs=69.4
Q ss_pred cceEEEeCCCC-EEEEEEcCC-CCeEEEEeCCCCC-------eEEEE-eCCCCC-----ceeEEEeCCCCeEE-EEeC--
Q psy950 35 NTTSPFSPLPR-LLYWIDYGQ-YPRIGKSYLDGSK-------WTSIV-SNGISM-----PRDLTIDMQTHDVY-WVDA-- 96 (407)
Q Consensus 35 P~~iavdp~~g-~lywtd~~~-~~~I~r~~~dG~~-------~~~l~-~~~~~~-----P~glaiD~~~~~lY-w~d~-- 96 (407)
...++.-|... .+||++..+ ...|..+++++.. ...++ ...-.+ +...+..+.++.|+ |...
T Consensus 262 ~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~ 341 (740)
T 4a5s_A 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE 341 (740)
T ss_dssp EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT
T ss_pred EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC
Confidence 45667777755 344555443 2478888888654 22232 222222 34677888888876 7643
Q ss_pred CCCeEEEEecCCCeEEEEccCCCCceEE-EEeCCEEEEEeCC------CCeEEEEecCC
Q psy950 97 KLDLIQKISYNGGNRQIIRRNLPNPMGI-AVHKSDVYWVDRN------LRTVYKASKLA 148 (407)
Q Consensus 97 ~~~~I~~~~~dG~~~~~~~~~~~~P~~l-av~~~~lYwtd~~------~~~I~~~~~~~ 148 (407)
+...|..++.+|...+.+-........+ .++++.||++... ...|++++..+
T Consensus 342 G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 342 GYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp SCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred CceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 4467999999988776554322222222 2557899998765 23688888765
No 239
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=69.30 E-value=61 Score=28.69 Aligned_cols=103 Identities=19% Similarity=0.052 Sum_probs=63.2
Q ss_pred EEEcC-CCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCC-------CCeEEEEeCCCCCceeEEEeCCCCeEEEEeCC
Q psy950 26 KLKTS-FRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDG-------SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAK 97 (407)
Q Consensus 26 ~l~~~-~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG-------~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~ 97 (407)
+.+.. +..+...||++| +|.||-.. ...+++.+.-. ...+.|-..+...=..+.+|+ ++.||.+ .
T Consensus 33 ~~iG~~gw~~~~~laf~P-~G~LYaV~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~ 105 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSP-GGELYGVL---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--S 105 (236)
T ss_dssp EEEESSSCTTCSEEEECT-TSCEEEEE---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--E
T ss_pred cccCccccccceeEEECC-CccEEEEe---CCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--C
Confidence 33433 577889999999 89999982 24899988732 113344433333346899996 7899999 3
Q ss_pred CCeEEEEec--CCCeE-----EEEcc-CCCCceEEEEeC-CEEEEEe
Q psy950 98 LDLIQKISY--NGGNR-----QIIRR-NLPNPMGIAVHK-SDVYWVD 135 (407)
Q Consensus 98 ~~~I~~~~~--dG~~~-----~~~~~-~~~~P~~lav~~-~~lYwtd 135 (407)
.+.|.+++- +|... ..+.. .-..-..|.+.. +.||-..
T Consensus 106 dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 106 KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 389999876 44432 12211 122334555554 6666554
No 240
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=68.96 E-value=61 Score=28.56 Aligned_cols=113 Identities=9% Similarity=-0.047 Sum_probs=70.0
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEE--EEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCe
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTS--IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN 110 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~--l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~ 110 (407)
....++++.|...+|+..... ..|...+++...... ...........+++.+.++.|+.+. ..+.|...++....
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEA--STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQT 174 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESS--SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE
T ss_pred CcEEEEEEcCCCCEEEEEcCC--CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCc
Confidence 346889999987777766543 478888888665322 2333334578999999777766665 45778888887654
Q ss_pred E-EEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCC
Q psy950 111 R-QIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 111 ~-~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~ 148 (407)
. ..+.........+++.+ +..+.+-...+.|...+...
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 4 33333445567777765 33334433445555555443
No 241
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=68.66 E-value=2.6 Score=30.82 Aligned_cols=16 Identities=25% Similarity=0.663 Sum_probs=13.4
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
.+.|.|+.||. |..|.
T Consensus 61 ~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 61 APSCICHPGYH----GERCH 76 (79)
T ss_dssp BCCEEECTTEE----STTCC
T ss_pred CeEEEcCCCcc----ccccc
Confidence 68999999998 77774
No 242
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=67.97 E-value=3.9 Score=30.53 Aligned_cols=25 Identities=24% Similarity=0.559 Sum_probs=18.3
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|++.+.. ++|+|.|+.||. |..|.
T Consensus 61 ~C~~~~~~-----~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 61 TCQQALYF-----SDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp EEEEESSS-----SCEEEECCTTCB----SSSCC
T ss_pred EeecCCCC-----CCeEeECCCCCc----CCcCC
Confidence 57766511 269999999997 77785
No 243
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=67.95 E-value=82 Score=29.67 Aligned_cols=113 Identities=9% Similarity=0.012 Sum_probs=71.7
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeC-C-CCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSN-G-ISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~-~-~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
.-.+|+++|..+.+..+-... ..|..-+++......+... + -....+|+..+.++.++.+-...++|..-++.+...
T Consensus 121 ~V~~l~~~P~~~~~lasGs~d-g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKG-GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETT-SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred CEEEEEEeCCCCCEEEEEeCC-CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 357899999877655443332 4788888876655444432 2 235789999987666666767778899999988776
Q ss_pred EEEccC---CCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 112 QIIRRN---LPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 112 ~~~~~~---~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
+.+... ......+++.. +.++.+-...+.|...+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 665522 22335677765 4444554445556555544
No 244
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=67.23 E-value=1.1 Score=36.20 Aligned_cols=34 Identities=26% Similarity=0.659 Sum_probs=0.0
Q ss_pred CCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 181 NNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.++|.. ..|.+ .|++..+ +|+|.|+.||. |..|.
T Consensus 42 ~d~C~~---~pC~n~g~C~~~~~-------~y~C~C~~G~~----G~~C~ 77 (134)
T 2vh0_B 42 GDQCET---SPCQNQGKCKDGLG-------EYTCTCLEGFE----GKNCE 77 (134)
T ss_dssp --------------------------------------------------
T ss_pred cCcCCC---CCCCCcCCcccCCC-------CEEeeCCCCcc----CCccc
Confidence 456653 34554 7877665 59999999997 56675
No 245
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=66.93 E-value=2.4 Score=42.98 Aligned_cols=16 Identities=50% Similarity=1.215 Sum_probs=14.5
Q ss_pred ceEEecC-CCccccCCCCccc
Q psy950 209 HYKCDCA-TGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~-~G~~l~~d~~~C~ 228 (407)
+|+|.|+ .||. |..|.
T Consensus 23 ~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 23 RYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp EEEEECTTSSEE----TTTTC
T ss_pred ceEeeCCCCCcC----CCCCC
Confidence 6999999 9998 88897
No 246
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=64.65 E-value=6.1 Score=26.07 Aligned_cols=16 Identities=19% Similarity=0.578 Sum_probs=13.3
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
.+.|.|+.||. |..|.
T Consensus 33 ~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 33 AVTCKCQQEYF----GERCG 48 (50)
T ss_dssp EEEEECCSSCC----SSSCC
T ss_pred CeeEECCCCcc----ccccc
Confidence 68999999997 66674
No 247
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=64.42 E-value=80 Score=28.27 Aligned_cols=94 Identities=6% Similarity=-0.067 Sum_probs=55.8
Q ss_pred cceEEEeCCCCEEEEEEcC-------------------------CCCeEEEEeCCCCCe-EEEEeCCCCCceeEEEeCCC
Q psy950 35 NTTSPFSPLPRLLYWIDYG-------------------------QYPRIGKSYLDGSKW-TSIVSNGISMPRDLTIDMQT 88 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~-------------------------~~~~I~r~~~dG~~~-~~l~~~~~~~P~glaiD~~~ 88 (407)
..+++..|...+|+++... ....|.+.++++... +.+.. . ....++..+.+
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe
Confidence 7788999998888887532 124789999987665 55544 3 66788888876
Q ss_pred CeEEEEeCC--------CCeEEEEecCCCeEEEEccCCCCceEEEEeCCEEEEEe
Q psy950 89 HDVYWVDAK--------LDLIQKISYNGGNRQIIRRNLPNPMGIAVHKSDVYWVD 135 (407)
Q Consensus 89 ~~lYw~d~~--------~~~I~~~~~dG~~~~~~~~~~~~P~~lav~~~~lYwtd 135 (407)
.+|.+... ...|..++ .|. .+.+... .....++-++.+|++..
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~-~~~~~~spdg~~l~~~~ 233 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK-VSFYAVDSDGERILLYG 233 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE-ESEEEEEECSSCEEEEE
T ss_pred -EEEEEecccccccccccccEEEeC-CCc-eEEeccC-cceeeECCCCCEEEEEE
Confidence 55555432 33677777 443 3333222 22222333445565553
No 248
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=63.58 E-value=5.3 Score=32.13 Aligned_cols=24 Identities=21% Similarity=0.721 Sum_probs=18.7
Q ss_pred ccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 194 ~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..|++..+ +|+|.|+.||. |..|.
T Consensus 109 ~~C~~~~g-------~~~C~C~~G~~----G~~c~ 132 (143)
T 4d90_A 109 GICTDLVA-------NYSCECPGEFM----GRNCQ 132 (143)
T ss_dssp CEEEEETT-------EEEEECCTTCB----STTSC
T ss_pred CEeECCCC-------CeEeECCCCCc----cCCce
Confidence 47887765 69999999998 55564
No 249
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=63.45 E-value=88 Score=28.40 Aligned_cols=94 Identities=9% Similarity=-0.118 Sum_probs=56.0
Q ss_pred CCCcceEEEeC-CCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe-------------CCCCCceeEEEeCCCCeEEEEeCC
Q psy950 32 RSANTTSPFSP-LPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS-------------NGISMPRDLTIDMQTHDVYWVDAK 97 (407)
Q Consensus 32 ~~~P~~iavdp-~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~-------------~~~~~P~glaiD~~~~~lYw~d~~ 97 (407)
-....++++.| ...+|+-.... ..|...+++......... ........++..+.++.++.+-..
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSD--GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETT--SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred CCcEEEEEEecCCCCEEEEEcCC--CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 34468999999 55555444333 377777877544322211 122356788888866666666666
Q ss_pred CCeEEEEecCCCeEEEEccCCCCceEEEEe
Q psy950 98 LDLIQKISYNGGNRQIIRRNLPNPMGIAVH 127 (407)
Q Consensus 98 ~~~I~~~~~dG~~~~~~~~~~~~P~~lav~ 127 (407)
.+.|...+++................+++.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMS 150 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEee
Confidence 788888888876554333333344555554
No 250
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=62.21 E-value=1.3e+02 Score=30.50 Aligned_cols=119 Identities=13% Similarity=0.229 Sum_probs=74.3
Q ss_pred EEEeeeeecCCcceEEEcCCCCCcce-EEEeCCCCEE--EEE-EcCC----------CCeEEEEeCCCCCeEEEEeCCCC
Q psy950 12 WAIRLALRLLKKKKKLKTSFRSANTT-SPFSPLPRLL--YWI-DYGQ----------YPRIGKSYLDGSKWTSIVSNGIS 77 (407)
Q Consensus 12 ~s~~~~~~~~~~~~~l~~~~~~~P~~-iavdp~~g~l--ywt-d~~~----------~~~I~r~~~dG~~~~~l~~~~~~ 77 (407)
|...++.++|..-..++..+.....- .|.|...++| .|. |... ...+..+++||-.+..|+--
T Consensus 272 f~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~G--- 348 (620)
T 2zuy_A 272 FLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYG--- 348 (620)
T ss_dssp EEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEET---
T ss_pred cceeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEe---
Confidence 34556777777555555555554433 3667777743 554 2211 24789999999998888863
Q ss_pred CceeEEEeCCCCeEEEEeC-CCCeEEEEecCCCeE--EEEc--cCCCCceEEEEeC---CEEEEEeC
Q psy950 78 MPRDLTIDMQTHDVYWVDA-KLDLIQKISYNGGNR--QIIR--RNLPNPMGIAVHK---SDVYWVDR 136 (407)
Q Consensus 78 ~P~glaiD~~~~~lYw~d~-~~~~I~~~~~dG~~~--~~~~--~~~~~P~~lav~~---~~lYwtd~ 136 (407)
+.++|..+..||-+.. ..+.+.+.++|.... +++. +....|.|.+++. +.++|.-.
T Consensus 349 ---s~~iD~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 349 ---AMAVDHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp ---TEEECTTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred ---eeEECCCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEec
Confidence 2689986666665554 245688888886533 5443 4445688888753 77777653
No 251
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=57.82 E-value=5.1 Score=33.03 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=18.0
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|.+..+ +|+|.|+.||. |..|.
T Consensus 132 ~C~~~~~-------~~~c~C~~g~~----G~~Ce 154 (162)
T 1g1s_A 132 ECLETIG-------NYTCSCYPGFY----GPECE 154 (162)
T ss_dssp EEEECSS-------SEEEEECTTEE----STTSC
T ss_pred EEecCCC-------CceEeCCCCCc----Ccccc
Confidence 4666554 59999999998 67786
No 252
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=56.79 E-value=1.1e+02 Score=27.44 Aligned_cols=112 Identities=11% Similarity=-0.028 Sum_probs=67.4
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR- 111 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~- 111 (407)
....++++.|...+|.-.... ..|...++........+.........+++.+.++.|+- -...+.|...++.....
T Consensus 165 ~~v~~~~~spdg~~lasg~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s-~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAID--GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT-ASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE-ECTTSCEEEEETTTCCEE
T ss_pred ceEEEEEECCCCCEEEEEcCC--CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE-EcCCCeEEEEECCCccee
Confidence 345789999987777665544 36777777644333233322335689999996665544 44567888888875544
Q ss_pred EEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 112 QIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 112 ~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
..+.........+++.+ +....+-...+.|..-+..
T Consensus 242 ~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 242 GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 34444444567778765 3444444444555555544
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=55.75 E-value=1.1e+02 Score=27.03 Aligned_cols=104 Identities=10% Similarity=0.088 Sum_probs=63.6
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEEE
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQII 114 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~ 114 (407)
..++++|+. |.||... ..|.+.+.+|....... .....+.++++|. .++||.+.. .+.|...+.+|.....+
T Consensus 179 ~~~~~~d~~-g~l~v~t----~~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~v~t~-~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 179 TSAASIGKD-GTIYFGS----DKVYAINPDGTEKWNFY-AGYWTVTRPAISE-DGTIYVTSL-DGHLYAINPDGTEKWRF 250 (330)
T ss_dssp CSCCEECTT-CCEEEES----SSEEEECTTSCEEEEEC-CSSCCCSCCEECT-TSCEEEEET-TTEEEEECTTSCEEEEE
T ss_pred eeeeEEcCC-CEEEEEe----CEEEEECCCCcEEEEEc-cCCcceeceEECC-CCeEEEEcC-CCeEEEECCCCCEeEEe
Confidence 466777754 6677665 36777775554332222 2234577889987 457887764 46788888777766444
Q ss_pred ccCCCCceEEEEe-CCEEEEEeCCCCeEEEEecC
Q psy950 115 RRNLPNPMGIAVH-KSDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 115 ~~~~~~P~~lav~-~~~lYwtd~~~~~I~~~~~~ 147 (407)
......+..+.++ ++.||.... .+.|.+.+..
T Consensus 251 ~~~~~~~~~~~~~~~g~l~v~t~-~ggl~~~d~~ 283 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDTIYFGSY-DGHLYAINPD 283 (330)
T ss_dssp ECSSCCCSCCEECTTSCEEEECT-TCEEEEECTT
T ss_pred eCCCCccccceEcCCCeEEEecC-CCCEEEECCC
Confidence 3333334456677 477776644 4578888753
No 254
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=54.38 E-value=45 Score=34.39 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=52.8
Q ss_pred cceEEEeCCCCEEE-EEEc-CCCCeEEEEeCCCCCeEEEEeCCCCCcee-EEEeCCCCeEEEEeCC------CCeEEEEe
Q psy950 35 NTTSPFSPLPRLLY-WIDY-GQYPRIGKSYLDGSKWTSIVSNGISMPRD-LTIDMQTHDVYWVDAK------LDLIQKIS 105 (407)
Q Consensus 35 P~~iavdp~~g~ly-wtd~-~~~~~I~r~~~dG~~~~~l~~~~~~~P~g-laiD~~~~~lYw~d~~------~~~I~~~~ 105 (407)
+.+.+..|....|+ |... +....|++.+++|...+.|.... ..... +..| +++||++... ...|.+++
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~-~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGT-WEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSS-SCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCC-EEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEE
Confidence 45778889887776 6643 33458999999998877665432 22233 3466 7899998764 35799999
Q ss_pred cCCCeEE
Q psy950 106 YNGGNRQ 112 (407)
Q Consensus 106 ~dG~~~~ 112 (407)
++|...+
T Consensus 398 ~~g~~~~ 404 (740)
T 4a5s_A 398 LIDYTKV 404 (740)
T ss_dssp TTEEEEE
T ss_pred CCCCCcc
Confidence 9987765
No 255
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=54.22 E-value=1.4e+02 Score=27.99 Aligned_cols=94 Identities=11% Similarity=-0.034 Sum_probs=59.5
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCC---CCCeEEEEe-CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLD---GSKWTSIVS-NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG 109 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~d---G~~~~~l~~-~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~ 109 (407)
...++++.|...+|+.+-... ..|...+++ |.....+.. ..-..+..+++++.+..|+.++. .+.|...++...
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~ 181 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSI 181 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSC
T ss_pred ceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCc
Confidence 368999999988887665433 366666665 444444432 22346789999998888888865 677888887543
Q ss_pred eEE-----EEccCCCCceEEEEeCC
Q psy950 110 NRQ-----IIRRNLPNPMGIAVHKS 129 (407)
Q Consensus 110 ~~~-----~~~~~~~~P~~lav~~~ 129 (407)
... .+.........|++.++
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKD 206 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEEC
T ss_pred ccccccceeeecccCceEEEEEcCC
Confidence 321 22223344566776553
No 256
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=54.21 E-value=5.2 Score=37.07 Aligned_cols=18 Identities=28% Similarity=0.650 Sum_probs=13.9
Q ss_pred cceecCCCCCCCCcceEEecCCCcc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTP 219 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~ 219 (407)
.|.+..+ +|+|.|+.||.
T Consensus 18 ~C~~~~~-------~~~C~C~~g~~ 35 (317)
T 3h5c_B 18 SCQDSIW-------GYTCTCSPGYE 35 (317)
T ss_dssp CCCCCSS-------SCCCCCSSSCC
T ss_pred EeECCCC-------CeEEECCCCCc
Confidence 4666554 59999999986
No 257
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=53.73 E-value=7.1 Score=31.38 Aligned_cols=25 Identities=20% Similarity=0.757 Sum_probs=15.8
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|++.... ++|+|.|+.||. +..|.
T Consensus 13 ~C~~~~~~-----g~~~C~C~~G~~----G~~C~ 37 (143)
T 4d90_A 13 ICLPGLAD-----GSFSCECPDGFT----DPNCS 37 (143)
T ss_dssp EEEC----------CCEEECCTTCC----TTTTC
T ss_pred EeeCCCCC-----CCEEeECCCCCC----CCCCc
Confidence 56655421 269999999997 66675
No 258
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=53.48 E-value=1.2e+02 Score=26.78 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=62.1
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCc----ccc--cCCCCccEEEEeccCC-eEEEEeCCCCCeEEEEEC-
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS----SAS--SNLTNVVGVEFDYADD-KILFTQIRPWAKIAWIPT- 334 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~----~~~--~~~~~~~glAvDwi~~-~LYwtd~~~~~~I~v~~~- 334 (407)
..+.+++|.+.++.|+.+... +.|...+++... ... .....+..+++.+.++ .|+.... . +.|.+.++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-g~i~~wd~~ 87 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWD--GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV-Q-GEILKVDLI 87 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETT--SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET-T-SCEEEECSS
T ss_pred CcEEEEEEcCCCCEEEEEcCC--CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC-C-CeEEEEEec
Confidence 346788888877777665443 456666655443 111 3333788999988766 5665554 4 57999998
Q ss_pred CCCcc--ccc--CCCceeEEEEcCCCCeEEEEeC
Q psy950 335 TNPSS--ASS--NLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 335 ~~~~r--l~~--~l~~P~~iavdp~~g~lywtd~ 364 (407)
.+... +.. .-.....|++.| ..+++-...
T Consensus 88 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~ 120 (342)
T 1yfq_A 88 GSPSFQALTNNEANLGICRICKYG-DDKLIAASW 120 (342)
T ss_dssp SSSSEEECBSCCCCSCEEEEEEET-TTEEEEEET
T ss_pred cCCceEeccccCCCCceEEEEeCC-CCEEEEEcC
Confidence 66542 333 446778999999 666655543
No 259
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=52.95 E-value=7.1 Score=25.67 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=14.0
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
.+.|.|+.||. |..|.
T Consensus 29 ~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 29 TPSCVCDEGYI----GARCE 44 (50)
T ss_dssp EEEECCCTTEE----TTTTC
T ss_pred CeEEECCCCcc----cCCCC
Confidence 68999999998 88886
No 260
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=52.10 E-value=8.1 Score=32.71 Aligned_cols=26 Identities=19% Similarity=0.603 Sum_probs=20.1
Q ss_pred cccceecCCCCCCCCcceEEecCCCccccCCCC
Q psy950 193 EQLCFSYPVEFPQNKLHYKCDCATGTPSASDPK 225 (407)
Q Consensus 193 s~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~ 225 (407)
...|++.++ +|+|.|+.||.+..+..
T Consensus 150 ~~~C~n~~g-------~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 150 NEVCXNVEG-------VYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp TEEEEEETT-------EEEEEECTTCEEETTTT
T ss_pred CcceecCCC-------CeeeECCCCCccCcccc
Confidence 457888766 69999999998665544
No 261
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=51.56 E-value=2e+02 Score=28.95 Aligned_cols=118 Identities=13% Similarity=0.191 Sum_probs=74.0
Q ss_pred EEeeeeecCCcceEEEcCCCCCc-ceEEEeCCCCEE--EEE-EcCC----------CCeEEEEeCCCCCeEEEEeCCCCC
Q psy950 13 AIRLALRLLKKKKKLKTSFRSAN-TTSPFSPLPRLL--YWI-DYGQ----------YPRIGKSYLDGSKWTSIVSNGISM 78 (407)
Q Consensus 13 s~~~~~~~~~~~~~l~~~~~~~P-~~iavdp~~g~l--ywt-d~~~----------~~~I~r~~~dG~~~~~l~~~~~~~ 78 (407)
...++.++|..-..++..+.... .-.|.|...++| -|. |... ...+..+++||-.+..|+--
T Consensus 269 ~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G---- 344 (591)
T 2zux_A 269 LAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG---- 344 (591)
T ss_dssp EEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET----
T ss_pred eeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe----
Confidence 44557777774444444444332 456777777765 564 2211 24889999999998888763
Q ss_pred ceeEEEeCCCCeEEEEeC-CCCeEEEEecCCCe--EEEEc--cCCCCceEEEEeC---CEEEEEeC
Q psy950 79 PRDLTIDMQTHDVYWVDA-KLDLIQKISYNGGN--RQIIR--RNLPNPMGIAVHK---SDVYWVDR 136 (407)
Q Consensus 79 P~glaiD~~~~~lYw~d~-~~~~I~~~~~dG~~--~~~~~--~~~~~P~~lav~~---~~lYwtd~ 136 (407)
+.++|..+..||-+.. ..+.+.+.++|... .+++. +....|.|.++.. +.++|.-.
T Consensus 345 --s~~iD~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 345 --SMAVDHDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp --TEEECTTSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred --eeEECCCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 3588986666665543 34578899998654 25543 4445677887653 67777643
No 262
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=50.92 E-value=2.2e+02 Score=29.01 Aligned_cols=113 Identities=11% Similarity=-0.070 Sum_probs=72.7
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC-e
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG-N 110 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~-~ 110 (407)
-....++++.|...+|.-.... ..|...+++...........-.....++..+.+..|+.+. ..+.|...+++.. .
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDD--FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWA 131 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETT--SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSE
T ss_pred CCcEEEEEEeCCCCEEEEEeCC--CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCce
Confidence 3446899999998888776553 4888888875554444443345678999999888777655 4578888888754 3
Q ss_pred E-EEEccCCCCceEEEEeC--CEEEEEeCCCCeEEEEecC
Q psy950 111 R-QIIRRNLPNPMGIAVHK--SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 111 ~-~~~~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~~~ 147 (407)
. ..+.........+++.+ +.++.+-...+.|...+..
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 3 33333344556777765 3455554445555555544
No 263
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=50.74 E-value=1.4e+02 Score=26.76 Aligned_cols=114 Identities=8% Similarity=-0.076 Sum_probs=71.1
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR 111 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~ 111 (407)
-.....+++.|...+|.-.... ..|...++........+...-.....+++.+.++.|.... ..+.|...++.....
T Consensus 122 ~~~~~~~~~spdg~~l~~g~~d--g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~-~dg~i~iwd~~~~~~ 198 (321)
T 3ow8_A 122 PVDAWTLAFSPDSQYLATGTHV--GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA-IDGIINIFDIATGKL 198 (321)
T ss_dssp TTCCCCEEECTTSSEEEEECTT--SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEE
T ss_pred CccEEEEEECCCCCEEEEEcCC--CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc-CCCeEEEEECCCCcE
Confidence 3445788999987766654332 4788888876555544444444678899999777666554 457888888865443
Q ss_pred -EEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCC
Q psy950 112 -QIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 112 -~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~ 148 (407)
..+.........+++.+ +.+..+-...+.|...+...
T Consensus 199 ~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 199 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 34433334457888866 44555545555565555443
No 264
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=50.54 E-value=16 Score=35.04 Aligned_cols=25 Identities=20% Similarity=0.558 Sum_probs=18.5
Q ss_pred cceecCCCCCCCCcceEEecCC-CccccCCCCccccc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCAT-GTPSASDPKKCTTM 230 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~-G~~l~~d~~~C~~~ 230 (407)
.|+.... +|+|.|+. ||. |..|..+
T Consensus 198 ~C~~~~~-------~~~C~C~~~~~~----G~~C~~~ 223 (410)
T 3asi_A 198 VCLQQWD-------GFSCDCSMTSFS----GPLCNDP 223 (410)
T ss_dssp EEEECSS-------SEEEECTTTSEE----STTSCEE
T ss_pred EecCCCC-------CceEeccCCccc----CCCCCCC
Confidence 5666544 69999996 886 7889843
No 265
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=47.22 E-value=13 Score=29.58 Aligned_cols=24 Identities=21% Similarity=0.603 Sum_probs=18.0
Q ss_pred ccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 194 ~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..|++.++ +|+|.|+.||. +..|.
T Consensus 57 ~~C~~~~g-------~~~C~C~~G~~----G~~C~ 80 (135)
T 2vj3_A 57 ATCLDQIG-------EFQCICMPGYE----GVHCE 80 (135)
T ss_dssp CEEEECSS-------CEEEECCTTEE----SSSSC
T ss_pred CEEeCCCC-------CceeeCCCCCc----CCcce
Confidence 46887765 59999999997 55564
No 266
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=44.67 E-value=15 Score=34.54 Aligned_cols=34 Identities=26% Similarity=0.687 Sum_probs=29.7
Q ss_pred cccccccceecCCCCCCCCcceEEecCCCccccCCCCcccc
Q psy950 189 NGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 189 ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~ 229 (407)
..+|+|.|.+..+ ++.|.|..|+.|..+..+|..
T Consensus 131 ~~~~~~~c~n~~g-------~~~csC~~g~~l~~~~~~~~~ 164 (361)
T 4aqb_A 131 ELSCDHYCHNYIG-------GYYCSCRFGYILHTDNRTCRV 164 (361)
T ss_dssp SSCCSSEEEEETT-------EEEEECCTTCEECTTSSCEEC
T ss_pred CCCCCccCCccCC-------CceeccCCCeEEecccccccc
Confidence 5789999999876 699999999999998888863
No 267
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=44.43 E-value=1.7e+02 Score=26.01 Aligned_cols=109 Identities=5% Similarity=-0.099 Sum_probs=65.2
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCC--eEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCe
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSK--WTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN 110 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~--~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~ 110 (407)
....+++++|...+|+..... ..|...++++.. ....+...-.....+++.+.++.|+.+. ..+.|...++....
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNN--HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRT 85 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSS--SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTE
T ss_pred CCeEEEEECCCCCEEEEEeCC--CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCe
Confidence 346899999987776655332 478888888764 2222333334678999999777776665 45678887776554
Q ss_pred EE-EE--ccCCCCceEEEEeC--CEEEEEeCCCCeEEEEe
Q psy950 111 RQ-II--RRNLPNPMGIAVHK--SDVYWVDRNLRTVYKAS 145 (407)
Q Consensus 111 ~~-~~--~~~~~~P~~lav~~--~~lYwtd~~~~~I~~~~ 145 (407)
.. .+ .........+++.+ ..|+... ..+.|...+
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d 124 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICY 124 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEE
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEE
Confidence 32 22 23334556777765 3344333 334444333
No 268
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=44.14 E-value=1.7e+02 Score=25.76 Aligned_cols=108 Identities=10% Similarity=-0.080 Sum_probs=66.8
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCC----eEEEEeCCCCCceeEEEeCCCC-eEEEEeCCCCeEEEEec-C
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSK----WTSIVSNGISMPRDLTIDMQTH-DVYWVDAKLDLIQKISY-N 107 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~----~~~l~~~~~~~P~glaiD~~~~-~lYw~d~~~~~I~~~~~-d 107 (407)
...++++.|...+|+-+... ..|...+++... ...+.. .-.....+++.+.+. .|+.+. ..+.|...++ +
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d--~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~ 88 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWD--GSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIG 88 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETT--SEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSS
T ss_pred cEEEEEEcCCCCEEEEEcCC--CeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEc-CCCeEEEEEecc
Confidence 46889999987777766543 377777777555 333332 234678999998776 666655 5678999998 7
Q ss_pred CCeEEEEcc--CCCCceEEEEeCCEEEEEeCCCCeEEEEe
Q psy950 108 GGNRQIIRR--NLPNPMGIAVHKSDVYWVDRNLRTVYKAS 145 (407)
Q Consensus 108 G~~~~~~~~--~~~~P~~lav~~~~lYwtd~~~~~I~~~~ 145 (407)
+.....+.. .......|++..+.++.+-...+.|...+
T Consensus 89 ~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 89 SPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128 (342)
T ss_dssp SSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEEC
T ss_pred CCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEc
Confidence 766655444 44445667766433333333334444333
No 269
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=43.91 E-value=10 Score=32.42 Aligned_cols=16 Identities=25% Similarity=0.710 Sum_probs=13.6
Q ss_pred eEEecCCCccccCCCCcccc
Q psy950 210 YKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 210 ~~C~C~~G~~l~~d~~~C~~ 229 (407)
.+|.||.||. |..|..
T Consensus 165 ~~C~C~~Gw~----G~~C~~ 180 (188)
T 2ygo_A 165 RICECPDGFH----GPHCEG 180 (188)
T ss_dssp SCEECCTTCB----TTTTCB
T ss_pred CcccCcCCCC----CCCCcC
Confidence 5899999998 888863
No 270
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=43.74 E-value=2e+02 Score=26.47 Aligned_cols=235 Identities=9% Similarity=-0.028 Sum_probs=120.2
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC-Ce-
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG-GN- 110 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG-~~- 110 (407)
....++++.|...+|+..... ..|...++........+.........++.+. .++.+-...+.|...++.. ..
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGN--GLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCE
T ss_pred CCEEEEEECCCCCEEEEECCC--CeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcce
Confidence 346899999987777766554 3777778775554444433334556777753 3555555678888888873 32
Q ss_pred EEEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCccCCCc
Q psy950 111 RQIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPCFRTGN 189 (407)
Q Consensus 111 ~~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C~~~~n 189 (407)
...+........++++.. +.++.+-...+.|...+... + .... .+....
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~--~~~~-------------~~~~~~-------------- 259 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS-S--IPKF-------------TKTNHN-------------- 259 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC-S--SEEE-------------EECCCS--------------
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC-C--CccE-------------EecCCc--------------
Confidence 233334445566777765 33333333334444444432 1 0000 000000
Q ss_pred ccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeee----cccceEEeecCCCCCeeeeEeecCCcce
Q psy950 190 GGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFS----TRTEIRALHLDPTLTAVPFKTVSNLTNV 265 (407)
Q Consensus 190 g~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s----~~~~I~~i~l~~~~~~~~~~~~~~~~~~ 265 (407)
+.... .+-+|.|-. ++.+ ....|+-..+.... ++..+.....+
T Consensus 260 ~~v~~----------------~~~~p~~~~--------------ll~~~~gs~d~~i~i~d~~~~~---~~~~~~~~~~v 306 (401)
T 4aez_A 260 AAVKA----------------VAWCPWQSN--------------LLATGGGTMDKQIHFWNAATGA---RVNTVDAGSQV 306 (401)
T ss_dssp SCCCE----------------EEECTTSTT--------------EEEEECCTTTCEEEEEETTTCC---EEEEEECSSCE
T ss_pred ceEEE----------------EEECCCCCC--------------EEEEecCCCCCEEEEEECCCCC---EEEEEeCCCcE
Confidence 00011 111221100 1111 11223333333221 11222334457
Q ss_pred EEEEEEcCCCEEEEEEe-cCCceEEEEeCCCCcccc-----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc
Q psy950 266 VGVEFDYADDKILFTQI-RPWAKIAWIPTTNPSSAS-----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS 338 (407)
Q Consensus 266 ~ald~d~~~~~lywsd~-~~~~~I~~~~~~~~~~~~-----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~ 338 (407)
.++.+.+.++.++.+.. .. +.|...++....... +-...+..+++.+.++.|+... .. +.|.+.++....
T Consensus 307 ~~~~~s~~~~~l~~~~g~~d-g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~-~d-g~i~iw~~~~~~ 382 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPD-NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA-SD-ENLKFWRVYDGD 382 (401)
T ss_dssp EEEEECSSSSEEEEEECTTT-CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC-TT-SEEEEEECCC--
T ss_pred EEEEECCCCCeEEEEeecCC-CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe-CC-CcEEEEECCCCc
Confidence 78889888888877653 34 567776665532221 2223788999988776665544 44 689888887654
No 271
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=43.21 E-value=1.7e+02 Score=25.74 Aligned_cols=113 Identities=7% Similarity=-0.120 Sum_probs=68.8
Q ss_pred CCcceEEEeCCC--CEEEEEEcCCCCeEEEEeCCC--CCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC
Q psy950 33 SANTTSPFSPLP--RLLYWIDYGQYPRIGKSYLDG--SKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG 108 (407)
Q Consensus 33 ~~P~~iavdp~~--g~lywtd~~~~~~I~r~~~dG--~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG 108 (407)
.....|++.|.. |.++.+-... ..|...+++. ......+...-.....+++.+.++.|+.+. ..+.|...+++.
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~ 117 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWA-NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-CDKTAKMWDLSS 117 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETT-SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred CceEEEEEcCCCCCceEEEEECCC-CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-CCCcEEEEEcCC
Confidence 446999999996 5555554433 3777777774 333233332344678999999776666554 567888888887
Q ss_pred CeEEEEccCCCCceEEEE--eC-CEEEEEeCCCCeEEEEecC
Q psy950 109 GNRQIIRRNLPNPMGIAV--HK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 109 ~~~~~~~~~~~~P~~lav--~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
.....+.........+++ .. +.++.+-...+.|...+..
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 118 NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp TEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred CCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 766544444445566776 33 4444444444455544443
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=43.14 E-value=3e+02 Score=28.37 Aligned_cols=113 Identities=7% Similarity=0.074 Sum_probs=71.6
Q ss_pred ceEEEeCCCCEEEEEEcCC--C-CeEEEEeCCCCC--eEEEEeC-CCCCceeEEEeCCCCeEEEEeC--CCCeEEEEecC
Q psy950 36 TTSPFSPLPRLLYWIDYGQ--Y-PRIGKSYLDGSK--WTSIVSN-GISMPRDLTIDMQTHDVYWVDA--KLDLIQKISYN 107 (407)
Q Consensus 36 ~~iavdp~~g~lywtd~~~--~-~~I~r~~~dG~~--~~~l~~~-~~~~P~glaiD~~~~~lYw~d~--~~~~I~~~~~d 107 (407)
.+++..|....||++.... . .+|++..+++.. .+.+... +-..-.++++.+.++.|+|+.. ....|..++++
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 4678888888888886532 1 389999998764 2334332 2223457788898899988763 34568888987
Q ss_pred CC--eE--EEEccC-CCCceEEE-EeCCEEEEEeCC----CCeEEEEecCC
Q psy950 108 GG--NR--QIIRRN-LPNPMGIA-VHKSDVYWVDRN----LRTVYKASKLA 148 (407)
Q Consensus 108 G~--~~--~~~~~~-~~~P~~la-v~~~~lYwtd~~----~~~I~~~~~~~ 148 (407)
+. .. +.+... ...-+.+. ..++.|||.... ...|++++..+
T Consensus 304 ~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 304 KGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 64 23 344322 22335555 347888876543 23788888663
No 273
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=41.95 E-value=1.8e+02 Score=25.62 Aligned_cols=100 Identities=12% Similarity=0.183 Sum_probs=66.1
Q ss_pred cceEEEEEEcCCC---EEEEEEecCCceEEEEeCCCCcccc---cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCC
Q psy950 263 TNVVGVEFDYADD---KILFTQIRPWAKIAWIPTTNPSSAS---SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 263 ~~~~ald~d~~~~---~lywsd~~~~~~I~~~~~~~~~~~~---~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
..+.++++.+..+ .++.+-... +.|...++....... +....+..|++.+..+++..+-... +.|.+.++..
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~ 147 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD-HALRLWNIQT 147 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETT-CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT-SCEEEEETTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCC-CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC-CeEEEEEeec
Confidence 4577888887742 444554455 678888877654332 2333788999988556666666656 6899999876
Q ss_pred Ccc---c---ccCCCceeEEEEcCCCCeEEEEeC
Q psy950 337 PSS---A---SSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 337 ~~r---l---~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
... + ...-..+..++.+|...+|+-...
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecC
Confidence 643 2 234468889999997666655543
No 274
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=41.39 E-value=18 Score=27.67 Aligned_cols=40 Identities=23% Similarity=0.512 Sum_probs=26.9
Q ss_pred CC-ccCCCcccccc--cceecCCCCCCCCcceEEecCCCccc-cCCCCccc
Q psy950 182 NP-CFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTPS-ASDPKKCT 228 (407)
Q Consensus 182 n~-C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~l-~~d~~~C~ 228 (407)
|| |.. +||||.. .|..... ..-.|.|..||.- -.+|-.|.
T Consensus 51 Np~C~~-nNGGCd~nAeC~~~~~------~ki~C~C~~~~~~~~~~GvfC~ 94 (105)
T 1n1i_A 51 SITCEE-NNGGCAPEAECTMDDK------KEVECKCTKEGSEPLFEGVFCS 94 (105)
T ss_dssp CCCTTS-GGGGSCTTSEEEECTT------SCEEEECCSTTCCEEGGGTEEC
T ss_pred Ccchhh-cCCCcCCCcEeEECCC------CEEEeECCCCCCccccceEEEC
Confidence 78 887 8999964 7876632 2689999988641 12455553
No 275
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=41.38 E-value=13 Score=28.70 Aligned_cols=23 Identities=26% Similarity=0.686 Sum_probs=16.7
Q ss_pred cceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 195 LCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 195 lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|++..+ +|+|.|+.||. +..|.
T Consensus 27 ~C~~~~~-------~y~C~C~~G~~----G~~C~ 49 (114)
T 1aut_L 27 TCIDGIG-------SFSCDCRSGWE----GRFCQ 49 (114)
T ss_dssp EECCCSS-------CCCEEECTTEE----STTSC
T ss_pred CCCCCCC-------CcEeeCCCCCc----CCCcC
Confidence 4665554 69999999997 45575
No 276
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=41.32 E-value=2.1e+02 Score=27.06 Aligned_cols=79 Identities=4% Similarity=-0.070 Sum_probs=51.8
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeEEE
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNRQI 113 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~~~ 113 (407)
...+++.+|..+.++.+-... ..|...++............-..+..++..+.++.|+... ..+.|...+.+|.....
T Consensus 151 ~V~~v~~~p~~~~~las~s~D-g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~ 228 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLAD-GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKV 228 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETT-SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEE
T ss_pred ceEEEEECCCCCCEEEEEECC-CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCccccc
Confidence 468999999866666654443 3677777764422211111123678999999877777666 56789888888665554
Q ss_pred E
Q psy950 114 I 114 (407)
Q Consensus 114 ~ 114 (407)
+
T Consensus 229 ~ 229 (434)
T 2oit_A 229 I 229 (434)
T ss_dssp E
T ss_pred c
Confidence 4
No 277
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=40.73 E-value=1.9e+02 Score=25.92 Aligned_cols=109 Identities=9% Similarity=-0.042 Sum_probs=56.3
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCC---eEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCe
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSK---WTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGN 110 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~---~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~ 110 (407)
...++++.|...+|+-...+ ..|...+++... ........-.....+++.+.++.|+.+. ..+.|...+++...
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d--~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQD--RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQEN 133 (377)
T ss_dssp CEEEEEECTTTCCEEEEETT--SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC----
T ss_pred eEEEEEEeCCCCEEEEEeCC--CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcc
Confidence 35889999987777766544 356666666443 2222222234567888888766666655 35677777776554
Q ss_pred ----EEEEcc-CCCCceEEEEeC-CEEEEEeCCCCeEEEEe
Q psy950 111 ----RQIIRR-NLPNPMGIAVHK-SDVYWVDRNLRTVYKAS 145 (407)
Q Consensus 111 ----~~~~~~-~~~~P~~lav~~-~~lYwtd~~~~~I~~~~ 145 (407)
.+.+.. .......+++.+ +.+..+-...+.|...+
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 233333 344556777765 33333333334444333
No 278
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=40.32 E-value=80 Score=30.19 Aligned_cols=100 Identities=8% Similarity=0.053 Sum_probs=65.4
Q ss_pred CcceEEEEEEcCCCEEEEE---EecCCceEEEEeCCCC-----cc------cc---cCCCCccEEEEeccCCeEEEEeCC
Q psy950 262 LTNVVGVEFDYADDKILFT---QIRPWAKIAWIPTTNP-----SS------AS---SNLTNVVGVEFDYADDKILFTQIR 324 (407)
Q Consensus 262 ~~~~~ald~d~~~~~lyws---d~~~~~~I~~~~~~~~-----~~------~~---~~~~~~~glAvDwi~~~LYwtd~~ 324 (407)
...+.+++|++.++.|+.+ -... +.|...++... .. .. +-...+.+|++.+..++++.+-+.
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYG-SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTE-EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCC-ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 3457889999999988873 2233 56666665332 00 01 123378899998887788888777
Q ss_pred CCCeEEEEECCCCcccc---cCCCceeEEEEcCCCCeEEEEe
Q psy950 325 PWAKIAWIPTTNPSSAS---SNLTNVVGVEFDYADDKILFTQ 363 (407)
Q Consensus 325 ~~~~I~v~~~~~~~rl~---~~l~~P~~iavdp~~g~lywtd 363 (407)
. ++|.+.++.....+. ..-..+..++.+|...+|+-..
T Consensus 171 D-g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 171 D-GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp T-SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE
T ss_pred C-CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc
Confidence 7 789999887664322 1235788899988755554443
No 279
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=39.51 E-value=22 Score=23.66 Aligned_cols=20 Identities=20% Similarity=0.547 Sum_probs=14.6
Q ss_pred eEEecCCCccccCCCCccccc
Q psy950 210 YKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 210 ~~C~C~~G~~l~~d~~~C~~~ 230 (407)
.-|.|+.||+++.+ ..|+.+
T Consensus 34 ~GC~C~~G~v~~~~-g~CV~~ 53 (56)
T 1ccv_A 34 IGCQCQEGFLRNGE-GACVLP 53 (56)
T ss_dssp EEEEECTTCEEETT-TEEECG
T ss_pred CCCcCCCCeeECCC-CcccCh
Confidence 35999999998654 577643
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=38.99 E-value=3.4e+02 Score=27.90 Aligned_cols=109 Identities=6% Similarity=-0.070 Sum_probs=68.0
Q ss_pred ceEEEeCCCCEEEEEEcC-CCCeEEEEeCCCCC--e--EEEEeCCCCCceeEEEe-CCCCeEEEEeC----CCCeEEEEe
Q psy950 36 TTSPFSPLPRLLYWIDYG-QYPRIGKSYLDGSK--W--TSIVSNGISMPRDLTID-MQTHDVYWVDA----KLDLIQKIS 105 (407)
Q Consensus 36 ~~iavdp~~g~lywtd~~-~~~~I~r~~~dG~~--~--~~l~~~~~~~P~glaiD-~~~~~lYw~d~----~~~~I~~~~ 105 (407)
.++++.|...+|+|+.+. ....|+..++++.. . +.+.. ....+ -..+| ..+++|||... ...+|..++
T Consensus 274 ~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~-~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d 351 (751)
T 2xe4_A 274 AFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP-REKGV-RYDVQMHGTSHLVILTNEGGAVNHKLLIAP 351 (751)
T ss_dssp EEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-CCTTC-CEEEEEETTTEEEEEECTTTCTTCEEEEEE
T ss_pred EEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-CCCCc-eEEEeeeeCCEEEEEeCCCCCCCcEEEEEc
Confidence 567788999999998754 34589999998652 3 33332 22222 23455 45788888743 345899999
Q ss_pred cCC-Ce-EE-EEccC-CCCceEEEEeCCEEEEEeCCCC--eEEEEec
Q psy950 106 YNG-GN-RQ-IIRRN-LPNPMGIAVHKSDVYWVDRNLR--TVYKASK 146 (407)
Q Consensus 106 ~dG-~~-~~-~~~~~-~~~P~~lav~~~~lYwtd~~~~--~I~~~~~ 146 (407)
+++ .. +. ++... .....++++++++||++....+ .|..++.
T Consensus 352 ~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 352 RGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred CCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 884 33 33 33322 1133567778899998876555 5666664
No 281
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=36.98 E-value=2.2e+02 Score=25.08 Aligned_cols=114 Identities=5% Similarity=-0.136 Sum_probs=67.3
Q ss_pred CCcceEEEeCCC---CEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC
Q psy950 33 SANTTSPFSPLP---RLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG 109 (407)
Q Consensus 33 ~~P~~iavdp~~---g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~ 109 (407)
....++++.|.. |.++.+-... ..|...+++.......+...-.....++..+.++.++.+-...+.|...++...
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETT-CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCC-CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 346888998883 3444443333 478888887554444444334567899999855555555556788999888755
Q ss_pred eE-EEE---ccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 110 NR-QII---RRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 110 ~~-~~~---~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
.. ..+ .........+++.+ +....+-...+.|...+..
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 44 344 23344566777765 3333333334455555544
No 282
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=33.70 E-value=2.9e+02 Score=25.53 Aligned_cols=110 Identities=10% Similarity=0.024 Sum_probs=62.5
Q ss_pred cceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-EE
Q psy950 35 NTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR-QI 113 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~ 113 (407)
...++++|...+|.-...+ ..|..-++........+..-......+++++.+..| .+-...++|...++.+... +.
T Consensus 111 V~~~~~~p~~~~l~s~s~D--g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l-~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASED--ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp EEEEEECSSSSEEEEEESS--SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEE-EEEETTSCCCEEETTSSCEEEC
T ss_pred EEEEEEcCCCCEEEEEeCC--CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeEE
Confidence 4688999986665544433 377777776444333333223467889998865544 4444567777777776544 33
Q ss_pred EccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 114 IRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 114 ~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
+.........+++.+ +..+.+-...+.|...+..
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~ 222 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 222 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 333333456667755 3333443344455554544
No 283
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=33.00 E-value=27 Score=26.49 Aligned_cols=36 Identities=28% Similarity=0.634 Sum_probs=24.7
Q ss_pred CCCccCCCcccccc--cceecCCCCCCCCcceEEecCCCcc
Q psy950 181 NNPCFRTGNGGCEQ--LCFSYPVEFPQNKLHYKCDCATGTP 219 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~--lC~~~~~~~~~~~~~~~C~C~~G~~ 219 (407)
.++|.. +||||.. .|......+ ......|.|..||.
T Consensus 46 ~~sC~~-nNGGCd~nA~C~~~~~~~--~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 46 NPTCNE-NNGGCDADAKCTEEDSGS--NGKKITCECTKPDS 83 (99)
T ss_dssp CCCSTT-GGGGCCTTEEEECCSCSS--SSCCCEEEECSTTC
T ss_pred CCChhh-cCCCcCCCceeEecCCcc--cCCceEeEeCCCCc
Confidence 378998 8999964 787663200 11368999998865
No 284
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=30.70 E-value=5.4e+02 Score=27.73 Aligned_cols=278 Identities=9% Similarity=-0.029 Sum_probs=137.2
Q ss_pred cCCCCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC
Q psy950 29 TSFRSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG 108 (407)
Q Consensus 29 ~~~~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG 108 (407)
..-.....++++.|...+|.-...+ ..|...++........+...-.....+++.+.++.|..+. ..+.|...++..
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d--~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGAD--KTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS-ADKKVKIWDSAT 688 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTT
T ss_pred ecccccEEEEEECCCCCEEEEEeCC--CeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEECCC
Confidence 3334456899999998777665443 3777777765544433433344678999999777766654 467888888864
Q ss_pred CeE-EEEccCCCCceEEEEeC---CEEEEEeCCCCeEEEEecCCCCCCcccEEcccCCCCceeeEEeeecCCCCCCCCCc
Q psy950 109 GNR-QIIRRNLPNPMGIAVHK---SDVYWVDRNLRTVYKASKLASTNITLPTPIRTGLSGLRDIAIFDIVNQPPDENNPC 184 (407)
Q Consensus 109 ~~~-~~~~~~~~~P~~lav~~---~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~~~~p~~i~i~~~~~qp~~~~n~C 184 (407)
... ..+.........+++.. +.+..+-...+.|...+... + .....+...
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~--~~~~~~~~h----------------------- 742 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-K--ECRNTMFGH----------------------- 742 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-S--SEEEEECCC-----------------------
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-c--chhheecCC-----------------------
Confidence 433 44433333445555543 22333333334444444332 1 011111000
Q ss_pred cCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeec--ccceEEeecCCCCCeeeeEeecCC
Q psy950 185 FRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFST--RTEIRALHLDPTLTAVPFKTVSNL 262 (407)
Q Consensus 185 ~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~--~~~I~~i~l~~~~~~~~~~~~~~~ 262 (407)
.+....+|+. |.+ ....+.+. |+ ...+|.. ...+..+............+....
T Consensus 743 ----~~~v~~~~~s-p~~-----~~l~s~s~-------dg-------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 743 ----TNSVNHCRFS-PDD-----ELLASCSA-------DG-------TLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp ----SSCEEEEEEC-SST-----TEEEEEES-------SS-------EEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred ----CCCEEEEEEe-cCC-----CEEEEEEC-------CC-------eEEEEeCCCCcccceecccccccccCCcccccc
Confidence 0111111111 000 00000111 11 1112211 112222221110000000000111
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCc
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPS 338 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~ 338 (407)
..+.++.+.+.++.+.... . +.+...++....... +-...+..+++.+.++.++..... +.|.+.++....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~--~-~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--g~v~vwd~~~~~ 873 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAA--K-NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ--YCVELWNIDSRL 873 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEE--T-TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS--SCEEEEETTTTE
T ss_pred ceEEEEEECCCCCEEEEEc--C-CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCc
Confidence 2344566677777666654 3 446666665543322 222378899999987777666554 579999888765
Q ss_pred c---cccCCCceeEEEEcCCCCeEEEEeC
Q psy950 339 S---ASSNLTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 339 r---l~~~l~~P~~iavdp~~g~lywtd~ 364 (407)
. +......+.+++..|...+|+-...
T Consensus 874 ~~~~~~~h~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 874 KVADCRGHLSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred eeeecCCCccceEEEEECCCCCEEEEEeC
Confidence 4 2234467889999997666655443
No 285
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=29.88 E-value=24 Score=27.77 Aligned_cols=15 Identities=20% Similarity=0.598 Sum_probs=11.9
Q ss_pred eEEecCCCccccCCCCccc
Q psy950 210 YKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 210 ~~C~C~~G~~l~~d~~~C~ 228 (407)
++|.||.||. |..|.
T Consensus 19 ~~C~Cp~g~~----G~~Ce 33 (122)
T 2fd6_A 19 HWCNCPKKFG----GQHCE 33 (122)
T ss_dssp EEEECCTTEE----STTSC
T ss_pred CCccCCCCCC----Ccccc
Confidence 4999999986 66665
No 286
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=29.44 E-value=3.1e+02 Score=24.48 Aligned_cols=72 Identities=13% Similarity=-0.125 Sum_probs=43.1
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCC----eEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecC
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSK----WTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYN 107 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~----~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~d 107 (407)
.....+++.|...+|+-.... ..|...+++... ...+....-.....+++.+.++.|+.+. ..+.|...++.
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 176 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGA--RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADRKAYVLSAY 176 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESS--SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSSCEEEEEEC
T ss_pred CceEEEEECCCCCEEEEEecC--CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCCEEEEEEEE
Confidence 346889999987777666553 367777776554 2333221234678999999766665554 34667776664
No 287
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=28.16 E-value=4.6e+02 Score=26.15 Aligned_cols=96 Identities=5% Similarity=-0.013 Sum_probs=66.8
Q ss_pred eEEEEEEcCCCEEEEEEec--------CCceEEEEeCCCCccc--ccCCCCccEEEEeccCCeEEEEeCCCCCeEEEEEC
Q psy950 265 VVGVEFDYADDKILFTQIR--------PWAKIAWIPTTNPSSA--SSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPT 334 (407)
Q Consensus 265 ~~ald~d~~~~~lywsd~~--------~~~~I~~~~~~~~~~~--~~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~ 334 (407)
+..+++.+.+++|.++... . ..|+..++++.... ..+...+..+++-+.++.|.++.. +.|.+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~-~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~---~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYT-ATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ---NNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEE-EEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEET---TEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecc-eEEEEEECCCCccccceecCcccccceECCCCCEEEEEEC---CeEEEEeC
Confidence 5678899999998887541 3 57888998877652 223236788999999999999853 57999988
Q ss_pred CCCcc--ccc-C------------------CCceeEEEEcCCCCeEEEEeC
Q psy950 335 TNPSS--ASS-N------------------LTNVVGVEFDYADDKILFTQI 364 (407)
Q Consensus 335 ~~~~r--l~~-~------------------l~~P~~iavdp~~g~lywtd~ 364 (407)
.+... +.. . .....+++..|-..+|+++-.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 66532 321 1 122358899998888877643
No 288
>2nx7_A Nematocyst outer WALL antigen; cysteine rich, disulfide bonds, rich in turns, structural protein; NMR {Hydra vulgaris}
Probab=27.89 E-value=10 Score=20.71 Aligned_cols=18 Identities=33% Similarity=0.767 Sum_probs=13.3
Q ss_pred CCCccCCCcccccccceec
Q psy950 181 NNPCFRTGNGGCEQLCFSY 199 (407)
Q Consensus 181 ~n~C~~~~ng~Cs~lC~~~ 199 (407)
.|||+. ...||+.-|.+.
T Consensus 2 qnpcsl-qqpgcssacapa 19 (28)
T 2nx7_A 2 QNPCSL-QQPGCSSACAPA 19 (28)
T ss_dssp CCTHHH-HSTTCCGGGTTT
T ss_pred CCCccc-cCCCccccccch
Confidence 478876 567899888653
No 289
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=27.88 E-value=3.1e+02 Score=23.99 Aligned_cols=96 Identities=13% Similarity=0.095 Sum_probs=56.1
Q ss_pred ceEEEE----EEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEecc--CCeEEEEeCCCCCeEEEEECC
Q psy950 264 NVVGVE----FDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYA--DDKILFTQIRPWAKIAWIPTT 335 (407)
Q Consensus 264 ~~~ald----~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi--~~~LYwtd~~~~~~I~v~~~~ 335 (407)
.+.++. +.+.++.++.. ... +.|...++....... .....+..+++.+. .++.+.+-... +.|.+.++.
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~-~~d-~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-g~i~i~d~~ 242 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAG-YDN-GDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLE-GKFHVFDMR 242 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEE-ETT-SEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEEST-TEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEE-ccC-CeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCC-CeEEEEeCc
Confidence 455565 34445544443 344 568778877655432 33337889999883 34444554555 689888876
Q ss_pred CCcc---cc-----cCCCceeEEEEcCCCCeEEEE
Q psy950 336 NPSS---AS-----SNLTNVVGVEFDYADDKILFT 362 (407)
Q Consensus 336 ~~~r---l~-----~~l~~P~~iavdp~~g~lywt 362 (407)
.... +. ........++..|....++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEE
Confidence 5432 11 344677888888876534444
No 290
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=27.57 E-value=43 Score=27.17 Aligned_cols=16 Identities=31% Similarity=0.966 Sum_probs=13.7
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
+|+|.|+.||. |..|.
T Consensus 139 ~~~c~C~~g~~----g~~C~ 154 (164)
T 3cfw_A 139 NYTCNCDVGYY----GPQCQ 154 (164)
T ss_dssp EEEEEECTTCB----SSSSC
T ss_pred CceeeeCCCcc----ccccc
Confidence 69999999987 66786
No 291
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=27.07 E-value=23 Score=20.86 Aligned_cols=20 Identities=30% Similarity=0.698 Sum_probs=14.2
Q ss_pred eEEecCCCccccCCCCccccc
Q psy950 210 YKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 210 ~~C~C~~G~~l~~d~~~C~~~ 230 (407)
.-|.|+.||..+.+ ..|+.+
T Consensus 5 ~GC~C~~G~vrn~~-G~CV~~ 24 (32)
T 3ssb_I 5 DKCYCEDGYARDVN-GKCIPI 24 (32)
T ss_dssp EEEEECTTEEECTT-SCEEEG
T ss_pred CCCCcCCCcEECCC-CCEECH
Confidence 45999999986654 457643
No 292
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=26.52 E-value=3.6e+02 Score=24.40 Aligned_cols=94 Identities=9% Similarity=0.168 Sum_probs=56.5
Q ss_pred ceEEEEEEcCCCEEEEEEecCC--ceEEEEeCCCCccc-------ccCCCCccEEEEeccCCeEEEEeCCCCCeEEEEEC
Q psy950 264 NVVGVEFDYADDKILFTQIRPW--AKIAWIPTTNPSSA-------SSNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPT 334 (407)
Q Consensus 264 ~~~ald~d~~~~~lywsd~~~~--~~I~~~~~~~~~~~-------~~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~ 334 (407)
.+.++.|.+.++.+........ ..+...++...... .+-...+..||+.+.++.|.-.... ++|.+.++
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D--~~V~iwd~ 298 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND--NSIALVKL 298 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT--SCEEEEET
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC--CEEEEEEC
Confidence 4567888887777766544320 13444443322211 1222268899999988766655443 57999998
Q ss_pred CCCccc---cc-CCCceeEEEEcCCCCeE
Q psy950 335 TNPSSA---SS-NLTNVVGVEFDYADDKI 359 (407)
Q Consensus 335 ~~~~rl---~~-~l~~P~~iavdp~~g~l 359 (407)
.....+ .. .-....+|+..|-..+|
T Consensus 299 ~~~~~~~~~~~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 299 KDLSMSKIFKQAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp TTTEEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred CCCcEEEEecCcccCCEEEEEECCCCCEE
Confidence 776542 23 23567899999865554
No 293
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=26.49 E-value=3.6e+02 Score=24.38 Aligned_cols=251 Identities=10% Similarity=-0.032 Sum_probs=121.3
Q ss_pred EEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC-CeEEEEccC
Q psy950 39 PFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG-GNRQIIRRN 117 (407)
Q Consensus 39 avdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG-~~~~~~~~~ 117 (407)
++.|...+|.-.... ..|...++..................++..+.++.|+.+ ...+.|...+++. .....+...
T Consensus 104 ~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTE--GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISS-SQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp EECSSSCEEEEEETT--SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCCCEEEECC
T ss_pred EEecCCCEEEEEECC--CCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEE-eCCCeEEEEeCCCCcCceEEcCC
Confidence 444554454444332 367777777554433332233467899999976655544 4567888888864 444555444
Q ss_pred CCCceEEEEeC-CEEEEEeCCCCeEEEEecCCCCCCcccEEcccC---CCCceeeEEeeecCCCCCCCCCccCCCccccc
Q psy950 118 LPNPMGIAVHK-SDVYWVDRNLRTVYKASKLASTNITLPTPIRTG---LSGLRDIAIFDIVNQPPDENNPCFRTGNGGCE 193 (407)
Q Consensus 118 ~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~~~g~~~~~~~i~~~---~~~p~~i~i~~~~~qp~~~~n~C~~~~ng~Cs 193 (407)
......+++.+ +.++.+-...+.|...+... + .....+... ......+.+....... .... ......
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~-~~~~v~ 251 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGT-G--TTIHTFNRKENPHDGVNSIALFVGTDRQ-----LHEI-STSKKN 251 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTT-T--EEEEEECBTTBTTCCEEEEEEEECCCSS-----CGGG-CCCCCC
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-C--ceeEEeecCCCCCCCccEEEEecCCcce-----eeec-ccCccc
Confidence 45567788875 33333434445565555543 1 111121110 0111112211100000 0000 000000
Q ss_pred ccceecCCCCCCCCcceEEecCCCccccCCCCcccccceeeeeecc-cceEEeecCCCCCeeeeEeecCCcceEEEEEEc
Q psy950 194 QLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTMDEYLVFSTR-TEIRALHLDPTLTAVPFKTVSNLTNVVGVEFDY 272 (407)
Q Consensus 194 ~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~~~~Ll~s~~-~~I~~i~l~~~~~~~~~~~~~~~~~~~ald~d~ 272 (407)
.++ +.+++ .+|+.+.. ..|.-..+....... .........+.++.+++
T Consensus 252 ~~~-----------------------~s~~~-------~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~~~ 300 (420)
T 3vl1_A 252 NLE-----------------------FGTYG-------KYVIAGHVSGVITVHNVFSKEQTI-QLPSKFTCSCNSLTVDG 300 (420)
T ss_dssp TTC-----------------------SSCTT-------EEEEEEETTSCEEEEETTTCCEEE-EECCTTSSCEEEEEECS
T ss_pred ceE-----------------------EcCCC-------CEEEEEcCCCeEEEEECCCCceeE-EcccccCCCceeEEEeC
Confidence 000 11111 22333222 334444443322111 11112234578899998
Q ss_pred CCCEEEEEEecCCceEEEEeCCCCcc-cc----cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCC
Q psy950 273 ADDKILFTQIRPWAKIAWIPTTNPSS-AS----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTN 336 (407)
Q Consensus 273 ~~~~lywsd~~~~~~I~~~~~~~~~~-~~----~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~ 336 (407)
.++.++++-... +.|...++..... .. .....+..++.. .+.++.+-+.. ++|.+.++..
T Consensus 301 ~~~~~l~~g~~d-g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~d-~~v~iw~~~~ 365 (420)
T 3vl1_A 301 NNANYIYAGYEN-GMLAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALFVSSGFD-TSIKLDIISD 365 (420)
T ss_dssp SCTTEEEEEETT-SEEEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEEEEETTT-EEEEEEEECC
T ss_pred CCCCEEEEEeCC-CeEEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEEEEecCC-ccEEEEeccC
Confidence 888455555555 6788888876533 21 123245566543 56777777777 7888887665
No 294
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=26.48 E-value=2e+02 Score=25.36 Aligned_cols=72 Identities=22% Similarity=0.093 Sum_probs=46.4
Q ss_pred EEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC-C------eEEEEcc-CCCCceEEEEeC-CEEEEEeCCCCeE
Q psy950 71 IVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG-G------NRQIIRR-NLPNPMGIAVHK-SDVYWVDRNLRTV 141 (407)
Q Consensus 71 l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG-~------~~~~~~~-~~~~P~~lav~~-~~lYwtd~~~~~I 141 (407)
+-..+......||+++ +++||-+ ..+.+...+... . .-+.+-. .-..-..+.++. +.||-. ..+.|
T Consensus 35 iG~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~i 109 (236)
T 1tl2_A 35 IGKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKL 109 (236)
T ss_dssp EESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEE
T ss_pred cCccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEE
Confidence 3333466778999999 8999999 667899988632 1 1122221 222234555555 788888 44889
Q ss_pred EEEecC
Q psy950 142 YKASKL 147 (407)
Q Consensus 142 ~~~~~~ 147 (407)
+|.+.-
T Consensus 110 yr~~pP 115 (236)
T 1tl2_A 110 YKASPP 115 (236)
T ss_dssp EEESCC
T ss_pred EEeCCC
Confidence 988764
No 295
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=25.85 E-value=5.3e+02 Score=26.08 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=13.6
Q ss_pred eeEEEeCCCCeEEEEe
Q psy950 80 RDLTIDMQTHDVYWVD 95 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d 95 (407)
.++++|+.++.+|...
T Consensus 396 ~~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPA 411 (677)
T ss_dssp SCCEEETTTTEEEEEE
T ss_pred CCceEcCCCCEEEEeC
Confidence 4799999999999853
No 296
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.78 E-value=6.3e+02 Score=26.55 Aligned_cols=96 Identities=6% Similarity=0.105 Sum_probs=62.0
Q ss_pred cceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccc--cCCCCccEEEEeccCCeEEEEeCCCCCeEEEEECCCCccc
Q psy950 263 TNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSAS--SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSA 340 (407)
Q Consensus 263 ~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~--~~~~~~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~rl 340 (407)
..+.+++|++.++.|...... +.|+..+..+..... .-...+..|++.+ ++.|.-.. .. ++|.+-++.....+
T Consensus 18 ~~V~~lafspdg~~lAsgs~D--g~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s-~D-~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVT--GEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN-AK-DTVYVLSLYSQKVL 92 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETT--SEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEE-TT-CEEEEEETTTCSEE
T ss_pred CCcEEEEECCCCCEEEEEeCC--CEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE-Cc-CeEEEEECCCCcEE
Confidence 457889999988877655433 467777766543322 1122788999998 55344443 44 68999998765432
Q ss_pred --ccCCCceeEEEEcCCCCeEEEEe
Q psy950 341 --SSNLTNVVGVEFDYADDKILFTQ 363 (407)
Q Consensus 341 --~~~l~~P~~iavdp~~g~lywtd 363 (407)
...-.....++++|...+|+-..
T Consensus 93 ~~~~~~~~V~~v~~sp~g~~l~sgs 117 (902)
T 2oaj_A 93 TTVFVPGKITSIDTDASLDWMLIGL 117 (902)
T ss_dssp EEEECSSCEEEEECCTTCSEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEEc
Confidence 22235678899998877776554
No 297
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=24.43 E-value=3.6e+02 Score=23.69 Aligned_cols=111 Identities=11% Similarity=-0.014 Sum_probs=64.9
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEe--CCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCC
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVS--NGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGG 109 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~--~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~ 109 (407)
-....++++.|...+|+-.... ..|...++.......... ..-..+..+++.+.++.|+.+. ..+.|...+++..
T Consensus 52 ~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 52 NGQVTGVDWAPDSNRIVTCGTD--RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQE 128 (372)
T ss_dssp SSCEEEEEEETTTTEEEEEETT--SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETT
T ss_pred CCcccEEEEeCCCCEEEEEcCC--CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCC
Confidence 3456899999987777766543 367777775544322222 2234678999999877777666 4566777666654
Q ss_pred e----EEEEc-cCCCCceEEEEeC-CEEEEEeCCCCeEEEEe
Q psy950 110 N----RQIIR-RNLPNPMGIAVHK-SDVYWVDRNLRTVYKAS 145 (407)
Q Consensus 110 ~----~~~~~-~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~ 145 (407)
. ...+. ........+++.. +.++.+-...+.|...+
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 129 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 3 12222 2234556777765 33444433344454444
No 298
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=24.18 E-value=50 Score=33.05 Aligned_cols=35 Identities=20% Similarity=0.412 Sum_probs=23.1
Q ss_pred CCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccc
Q psy950 180 ENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 180 ~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~ 228 (407)
..+||.. |..| +.... +.|+|.|+.||. .+|..|.
T Consensus 25 ~~~~c~~--~a~C----~~~~~------~~~~c~C~~G~a--g~G~~c~ 59 (551)
T 3fby_A 25 SPSECHE--HADC----VLERD------GSRSCVCAVGWA--GNGILCG 59 (551)
T ss_dssp SBCCCCT--TEEE----EECTT------SCEEEEECTTEE--SSSSSCE
T ss_pred CCCCCCC--CCee----EeCCC------CCEecCCCCCCC--CCCcccC
Confidence 3478876 5665 33333 269999999986 4566664
No 299
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=23.81 E-value=44 Score=26.81 Aligned_cols=16 Identities=38% Similarity=1.001 Sum_probs=13.5
Q ss_pred ceEEecCCCccccCCCCccc
Q psy950 209 HYKCDCATGTPSASDPKKCT 228 (407)
Q Consensus 209 ~~~C~C~~G~~l~~d~~~C~ 228 (407)
.|.|.|..||. |..|.
T Consensus 139 ~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 139 NYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp EEEEEECTTEE----STTSC
T ss_pred CeeEECCCCcc----Ccccc
Confidence 69999999997 66774
No 300
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=23.80 E-value=2.5e+02 Score=28.18 Aligned_cols=73 Identities=11% Similarity=-0.024 Sum_probs=52.7
Q ss_pred cceEEEeCCCCEEEEEEcC-------CCCeEEEEeCCCCCe---EEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEE
Q psy950 35 NTTSPFSPLPRLLYWIDYG-------QYPRIGKSYLDGSKW---TSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKI 104 (407)
Q Consensus 35 P~~iavdp~~g~lywtd~~-------~~~~I~r~~~dG~~~---~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~ 104 (407)
..++++.|...+|.++... ....|...++++... ..+. .....++..+.+++|.++. .+.|...
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~~la~~~--~~~i~~~ 135 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP----RPIQYLCWSPVGSKLAYVY--QNNIYLK 135 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC----SSBCCEEECSSTTCEEEEE--TTEEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC----cccccceECCCCCEEEEEE--CCeEEEE
Confidence 6789999999988887541 124889999987654 2221 3467789999999888875 4689999
Q ss_pred ecCCCeEEE
Q psy950 105 SYNGGNRQI 113 (407)
Q Consensus 105 ~~dG~~~~~ 113 (407)
++++.....
T Consensus 136 ~~~~g~~~~ 144 (719)
T 1z68_A 136 QRPGDPPFQ 144 (719)
T ss_dssp SSTTSCCEE
T ss_pred eCCCCCcEE
Confidence 887655443
No 301
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=23.51 E-value=29 Score=24.96 Aligned_cols=20 Identities=20% Similarity=0.396 Sum_probs=16.0
Q ss_pred eEEecCCCccccCCCCcccc
Q psy950 210 YKCDCATGTPSASDPKKCTT 229 (407)
Q Consensus 210 ~~C~C~~G~~l~~d~~~C~~ 229 (407)
..|.|+.||+++.++..|+.
T Consensus 47 ~GC~C~~G~vr~~~~g~CV~ 66 (78)
T 2p3f_N 47 PACVCKDGFYRDTVIGDCVR 66 (78)
T ss_dssp CEEEECSSCEEETTTTEEEC
T ss_pred CCcCcCCCEeEcCCCCceEC
Confidence 46999999998766467874
No 302
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=23.02 E-value=5.5e+02 Score=25.30 Aligned_cols=67 Identities=9% Similarity=0.019 Sum_probs=39.3
Q ss_pred eeEEEeCCCCeEEEEeC------------------------------------CCCeEEEEecC-CCeEEEEccCCCCce
Q psy950 80 RDLTIDMQTHDVYWVDA------------------------------------KLDLIQKISYN-GGNRQIIRRNLPNPM 122 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d~------------------------------------~~~~I~~~~~d-G~~~~~~~~~~~~P~ 122 (407)
.++++|+.++.||+... ..+.+..+++. |..+-.+.. ...+.
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~ 467 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAW 467 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCcc
Confidence 46899999999999742 23566777764 443322211 11122
Q ss_pred E--EEEeCCEEEEEeCCCCeEEEEecCC
Q psy950 123 G--IAVHKSDVYWVDRNLRTVYKASKLA 148 (407)
Q Consensus 123 ~--lav~~~~lYwtd~~~~~I~~~~~~~ 148 (407)
+ ++..++.+|... ..+.|+.++..+
T Consensus 468 ~~~~~t~gg~v~~g~-~dg~l~a~D~~t 494 (571)
T 2ad6_A 468 GGTLYTKGGLVWYAT-LDGYLKALDNKD 494 (571)
T ss_dssp SBCEEETTTEEEEEC-TTSEEEEEETTT
T ss_pred ceeEEECCCEEEEEc-CCCeEEEEECCC
Confidence 2 344567788753 346777777665
No 303
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=22.02 E-value=82 Score=35.05 Aligned_cols=18 Identities=28% Similarity=0.722 Sum_probs=14.7
Q ss_pred ceEEecC-CCccccCCCCccccc
Q psy950 209 HYKCDCA-TGTPSASDPKKCTTM 230 (407)
Q Consensus 209 ~~~C~C~-~G~~l~~d~~~C~~~ 230 (407)
+|.|.|+ .||. |..|..+
T Consensus 1037 ~~~C~C~~~g~~----G~~C~~~ 1055 (1245)
T 3qcw_A 1037 GFSCDCSMTSFS----GPLCNDP 1055 (1245)
T ss_dssp EEEEECTTSSCB----STTSCBC
T ss_pred CCEEECCCCCCC----CCCccCC
Confidence 6999999 5887 8889743
No 304
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=22.01 E-value=5.3e+02 Score=24.66 Aligned_cols=274 Identities=11% Similarity=-0.021 Sum_probs=0.0
Q ss_pred EEeeeeecCC----cceEEEcCCCCC-cceEEEeC--CCCEEEEEEcCCCCeEEEEeCC------CCCeEEEEeCCCCCc
Q psy950 13 AIRLALRLLK----KKKKLKTSFRSA-NTTSPFSP--LPRLLYWIDYGQYPRIGKSYLD------GSKWTSIVSNGISMP 79 (407)
Q Consensus 13 s~~~~~~~~~----~~~~l~~~~~~~-P~~iavdp--~~g~lywtd~~~~~~I~r~~~d------G~~~~~l~~~~~~~P 79 (407)
.+.+.....+ .....+..--.. ..++++.| ...+|+-......-+|+...-. .......+...-...
T Consensus 40 ~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 119 (615)
T ss_dssp EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccE
Q ss_pred eeEEEeCCCCeEEEEeCCC---CeEEEEecCCCeEEEEccCCCCceEEEEeCCE--EEEEeCCCCeEEEEecCCCCCCcc
Q psy950 80 RDLTIDMQTHDVYWVDAKL---DLIQKISYNGGNRQIIRRNLPNPMGIAVHKSD--VYWVDRNLRTVYKASKLASTNITL 154 (407)
Q Consensus 80 ~glaiD~~~~~lYw~d~~~---~~I~~~~~dG~~~~~~~~~~~~P~~lav~~~~--lYwtd~~~~~I~~~~~~~~g~~~~ 154 (407)
..+++.+.++.|+.+.... +.|...+ .+.....+.........+++.++. ++.+-...+.|...+... ...
T Consensus 120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~ 195 (615)
T 1pgu_A 120 SDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKF 195 (615)
T ss_dssp EEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEE
T ss_pred EEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cce
Q ss_pred cEEcccCCC---CceeeEEeee-cCCCCCCCCCccCCCcccccccceecCCCCCCCCcceEEecCCCccccCCCCccccc
Q psy950 155 PTPIRTGLS---GLRDIAIFDI-VNQPPDENNPCFRTGNGGCEQLCFSYPVEFPQNKLHYKCDCATGTPSASDPKKCTTM 230 (407)
Q Consensus 155 ~~~i~~~~~---~p~~i~i~~~-~~qp~~~~n~C~~~~ng~Cs~lC~~~~~~~~~~~~~~~C~C~~G~~l~~d~~~C~~~ 230 (407)
...+..... ....+.+... ...
T Consensus 196 ~~~~~~~~~~~~~v~~~~~~~~~~~~------------------------------------------------------ 221 (615)
T 1pgu_A 196 SASDRTHHKQGSFVRDVEFSPDSGEF------------------------------------------------------ 221 (615)
T ss_dssp EEEECSSSCTTCCEEEEEECSTTCCE------------------------------------------------------
T ss_pred eeeecccCCCCceEEEEEECCCCCCE------------------------------------------------------
Q ss_pred ceeeeeecccceEEeecCCCCCeeeeEee-----cCCcceEEEEEEcCCCEEEEEEecCCceEEEEeCCCCcccccCCCC
Q psy950 231 DEYLVFSTRTEIRALHLDPTLTAVPFKTV-----SNLTNVVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSSASSNLTN 305 (407)
Q Consensus 231 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~-----~~~~~~~ald~d~~~~~lywsd~~~~~~I~~~~~~~~~~~~~~~~~ 305 (407)
++.-+....|+-..+.... .+..+ .....+.++.+. ++..+++-... +.|...++........+...
T Consensus 222 --l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d-~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 222 --VITVGSDRKISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL--DSQKFATVGAD-ATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp --EEEEETTCCEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES--SSSEEEEEETT-SEEEEEETTTTEEEEEEECC
T ss_pred --EEEEeCCCeEEEEECCCCC---EeEEecccccccCCceEEEEEc--CCCEEEEEcCC-CcEEEEECCCCcEEEEEcCC
Q ss_pred -----ccEEEEeccCCeEEEEeCCCCCeEEEEECCCCcc---cccCCCceeEEEEcC
Q psy950 306 -----VVGVEFDYADDKILFTQIRPWAKIAWIPTTNPSS---ASSNLTNVVGVEFDY 354 (407)
Q Consensus 306 -----~~glAvDwi~~~LYwtd~~~~~~I~v~~~~~~~r---l~~~l~~P~~iavdp 354 (407)
..-.++-|..++...+-... +.|.+.++..... +.........++. |
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~ 348 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLD-GTLNFYELGHDEVLKTISGHNKGITALTV-N 348 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETT-SCEEEEETTEEEEEEEECCCSSCEEEEET-T
T ss_pred CCcccCceeEEEeCCCCeEEEEECC-CCEEEEECCCCcEEEEEeCCCCCEEEEEe-c
No 305
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=21.95 E-value=3.9e+02 Score=23.08 Aligned_cols=112 Identities=11% Similarity=-0.032 Sum_probs=63.5
Q ss_pred CCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCCCeE-
Q psy950 33 SANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNGGNR- 111 (407)
Q Consensus 33 ~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG~~~- 111 (407)
....++++.|...+|+-.... ..|...++........+...-.....++..+.++.|+.+. ..+.|...++.....
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~d--g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS-DDKTLKIWDVSSGKCL 100 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCEE
T ss_pred CcEEEEEECCCCCEEEEeeCC--CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC-CCCEEEEEECCCCcEE
Confidence 346899999987777665543 3666666654444334433334578899999776666554 467888888764433
Q ss_pred EEEccCCCCceEEEEeC-CEEEEEeCCCCeEEEEecC
Q psy950 112 QIIRRNLPNPMGIAVHK-SDVYWVDRNLRTVYKASKL 147 (407)
Q Consensus 112 ~~~~~~~~~P~~lav~~-~~lYwtd~~~~~I~~~~~~ 147 (407)
..+.........+++.+ +.++.+-...+.|...+..
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 34433333445566654 2333332333344444433
No 306
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=21.91 E-value=4.4e+02 Score=23.71 Aligned_cols=73 Identities=8% Similarity=-0.180 Sum_probs=46.2
Q ss_pred CcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCCCCeEEEEecCC
Q psy950 34 ANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAKLDLIQKISYNG 108 (407)
Q Consensus 34 ~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~dG 108 (407)
.-.+|++.|...+|.-.... ..|..-++........+..--.....+++.+.+..++.+-...++|..-++..
T Consensus 129 ~V~~v~~spdg~~l~sgs~d--~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~ 201 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKD--ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC 201 (344)
T ss_dssp CEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS
T ss_pred CEEEEEECCCCCEEEEEeCC--CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc
Confidence 35789999987766655443 36777777643332223222345678888887777777766667777777653
No 307
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=21.61 E-value=4e+02 Score=23.18 Aligned_cols=73 Identities=3% Similarity=-0.173 Sum_probs=50.2
Q ss_pred CCCcceEEEeCCCCEEEEEEcCCCCeEEEEeCCCCCeEEEEeCCCCCceeEEEeCCCCeEEEEeCC----CCeEEEEecC
Q psy950 32 RSANTTSPFSPLPRLLYWIDYGQYPRIGKSYLDGSKWTSIVSNGISMPRDLTIDMQTHDVYWVDAK----LDLIQKISYN 107 (407)
Q Consensus 32 ~~~P~~iavdp~~g~lywtd~~~~~~I~r~~~dG~~~~~l~~~~~~~P~glaiD~~~~~lYw~d~~----~~~I~~~~~d 107 (407)
-....++++.|...+|+-.... ..|...+++.......+. .-..+..+++.+.+..|+.+... .+.|...++.
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSAD--YSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETT--TEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 3446899999987777665543 478888887655544444 33468899999988777776543 2667766664
No 308
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=21.02 E-value=3.1e+02 Score=27.61 Aligned_cols=17 Identities=12% Similarity=0.100 Sum_probs=14.0
Q ss_pred ceeEEEEcCCCCeEEEE
Q psy950 346 NVVGVEFDYADDKILFT 362 (407)
Q Consensus 346 ~P~~iavdp~~g~lywt 362 (407)
+..++++||.++++|..
T Consensus 394 ~w~~~a~dp~~~~~yv~ 410 (599)
T 1w6s_A 394 NQGHDSYDPKRELFFMG 410 (599)
T ss_dssp CSCBCEEETTTTEEEEE
T ss_pred CCCCccCCCCCCEEEEe
Confidence 33578999999999985
Done!