BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9509
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26802|DDX51_DROME Probable ATP-dependent RNA helicase Dbp73D OS=Drosophila
melanogaster GN=Dbp73D PE=2 SV=3
Length = 687
Score = 171 bits (433), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 14/218 (6%)
Query: 18 TYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLS-- 75
++ +P +LLFSATLS DPEKL L LFQP+LF +V+ D ++E GAD +
Sbjct: 349 SFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKD----ATEEGADTEALT 404
Query: 76 --SGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLL 133
F+G++TTPAEL+E+ LKPL ++ L+ K+ + LCF N++ A RL +L
Sbjct: 405 DPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVL 464
Query: 134 HHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENID 193
V + TK ++E+ +L RN+ +++F KI+ ++ SD LARGIDV ++D
Sbjct: 465 ----KVLFQKYSTK--VSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVD 518
Query: 194 VVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
VV++YE P +I YIHR+GRTAR GR+GT+VT++T +
Sbjct: 519 VVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQD 556
>sp|Q6P9R1|DDX51_MOUSE ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=2 SV=1
Length = 639
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 20/209 (9%)
Query: 20 PSRP-QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGF 78
P P Q+LLFSATL+ DPEKL +L L+QP+LF++ + DT A D S
Sbjct: 393 PQMPLQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDT------AEVDENS--- 443
Query: 79 IGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDN 138
GK+T P L+ C + KPL++ L+ + + LCF N+ + +HRL L
Sbjct: 444 -GKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAFGG 502
Query: 139 VATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINY 198
V ++AE S QR KI+++F + KI L++++D ARGIDV+ +++VINY
Sbjct: 503 V---------SVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGIDVQGVELVINY 553
Query: 199 EAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
+AP ++ Y+HR+GRTAR G+ G + TL+
Sbjct: 554 DAPQYLRTYVHRVGRTARAGKTGQAFTLL 582
>sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3
Length = 666
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 21/209 (10%)
Query: 20 PSRP-QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGF 78
P P Q+LLFSATL+ +PEKL QL L QP+LF++ + G DT G
Sbjct: 421 PQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTD-----------GDGD 469
Query: 79 IGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDN 138
GK+ P L+ CS + KPLV+ L+ + VLCF N+ + +HRL L+
Sbjct: 470 SGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG 529
Query: 139 VATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINY 198
V ++AE S QR I+++F + KI L++++D ARGIDV+ +++V+NY
Sbjct: 530 V---------DVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNY 580
Query: 199 EAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
+AP ++ Y+HR+GRTAR G+ G + TL+
Sbjct: 581 DAPQYLRTYVHRVGRTARAGKTGQAFTLL 609
>sp|Q6DRI7|DDX51_DANRE ATP-dependent RNA helicase DDX51 OS=Danio rerio GN=ddx51 PE=2 SV=1
Length = 652
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 35/230 (15%)
Query: 3 RRGVGGLVIMWDTFLTYPSRP-QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVE----PA 57
RR V G + L+ P P Q+LLFSATL+ +PEKL L L QP+LF+S PA
Sbjct: 396 RRTVPGPITAAS--LSPPQIPLQKLLFSATLTQNPEKLQLLDLHQPRLFSSTHSLTDNPA 453
Query: 58 GTGDTQPTSSEAGADNLSSGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVL 117
+ DT F P LSE C+ + KPL++ + + L
Sbjct: 454 QSQDT-------------------FHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSPAL 494
Query: 118 CFVNTAQGAHRLARLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLV 177
CF N+ +GAHRL L+ V +AE S L +R K +++F + KI L+
Sbjct: 495 CFTNSREGAHRLYLLVKLFGGV---------EVAEFSSKLSPGERQKTLKDFEKGKIPLL 545
Query: 178 VASDNLARGIDVENIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
+++D ARGID+ + VINY+AP I+ YIHR+GRTAR G+ G + T +
Sbjct: 546 ISTDAAARGIDINGVKCVINYDAPQYIRTYIHRVGRTARAGKAGLAFTFL 595
>sp|Q76PD3|DBP6_SCHPO ATP-dependent RNA helicase dbp6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp6 PE=2 SV=1
Length = 604
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 116/220 (52%), Gaps = 17/220 (7%)
Query: 14 DTFLTY--PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGA 71
DT L Y PS Q+L+FSATL+ DP K+ L L P+L + D +A
Sbjct: 341 DTLLPYRLPSPLQKLVFSATLTRDPSKIASLKLHNPRLVLVQNKDMEVDDGGEIEDDAIV 400
Query: 72 DNLSSGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLAR 131
F+ P L E + S+ KP++LY LI + +LCFV + + A RL R
Sbjct: 401 ----------FSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTNILCFVKSNEAAARLHR 449
Query: 132 LLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVEN 191
LL I + + S L D+R KII F ++L+V SD +ARGIDV N
Sbjct: 450 LLELIHESLNQSFSCGL----FTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVAN 505
Query: 192 IDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
VINY+ P +++ Y+HRIGRTAR GR+G + TLV +HE
Sbjct: 506 TQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLVQSHE 545
>sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp.
japonica GN=Os02g0795900 PE=2 SV=1
Length = 521
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 35/215 (16%)
Query: 18 TYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSG 77
++P R +++ SATL+ DP KL QL L P L L+SG
Sbjct: 271 SFP-RLAKIVLSATLTQDPSKLSQLELQHPLL------------------------LNSG 305
Query: 78 FIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHID 137
++ P +L C +NLKPL L L+++ + L F ++ + +HRL+ LL +
Sbjct: 306 -KKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFE 364
Query: 138 NVATKGAGTKMNIAEVYSDLKFDQ-RNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
++ K + YS L+ + R K + F+ KID+++ +D +ARGI ++ + VI
Sbjct: 365 DLPFKFSE--------YSRLQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVI 416
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
NY+ P +K YIHR GRTAR G G+ T + HE
Sbjct: 417 NYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHE 451
>sp|Q54BD6|DDX51_DICDI Probable ATP-dependent RNA helicase ddx51 OS=Dictyostelium
discoideum GN=ddx51 PE=3 SV=1
Length = 563
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 40/230 (17%)
Query: 11 IMWDTFLTYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAG 70
+ W F + +LL SAT++++P K+ L L P FT T T+
Sbjct: 242 LCWSEF-----KLVKLLLSATMTYNPSKISLLQLNAPLFFT-------TSKTKEI----- 284
Query: 71 ADNLSSGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQG---------VLCFVN 121
K++ P+ L E + + KPLVL +I + ++ ++CF
Sbjct: 285 ----------KYSMPSTLKECYIISNGDQKPLVLLNIIYESLLKNNANGENKKKIICFTK 334
Query: 122 TAQGAHRLARLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASD 181
+ HRL LL I V K E S L +R ++ F+ +ID+++ SD
Sbjct: 335 SVDITHRLNTLLKLIGQVD----KLKFTCEEYSSSLSTVERADLLSRFKLNQIDILICSD 390
Query: 182 NLARGIDVENIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
++RG+D+++IDVVINY P NI Y+HR+GRTAR G G S T+V E
Sbjct: 391 IMSRGMDIQDIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYTIVDKSE 440
>sp|P34668|YO12_CAEEL Putative ATP-dependent RNA helicase ZK686.2 OS=Caenorhabditis
elegans GN=ZK686.2 PE=3 SV=2
Length = 593
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 15/204 (7%)
Query: 23 PQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKF 82
PQ+++ SATLS D E+LH +LF+P+LF++ D TS D++S G+
Sbjct: 314 PQKIVLSATLSKDVEELHLWNLFKPRLFSATA--VSVKDI--TSGIPQVDHVS----GRL 365
Query: 83 TTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATK 142
P+ +S +L PL +YQ I ++ L FVN ++RLA +L +
Sbjct: 366 ALPSSISHRLVVTDPKFHPLAVYQQITRNKFNRTLIFVNEVSSSNRLAHVLKEL------ 419
Query: 143 GAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPD 202
+ + + L +R K++++F + + +++ SD LARG D+ +D VINY P
Sbjct: 420 -CKDQFEVDYFTAQLFGKRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPA 478
Query: 203 NIKKYIHRIGRTARGGRQGTSVTL 226
+ K ++HR GRT R G+ G +++
Sbjct: 479 DDKLFVHRAGRTGRAGQDGYVISV 502
>sp|A3LSJ2|DBP6_PICST ATP-dependent RNA helicase DBP6 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP6 PE=3 SV=2
Length = 591
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 28/209 (13%)
Query: 23 PQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKF 82
PQ+L+FSATL+ D KL L +P+L D + +E F
Sbjct: 350 PQKLIFSATLTTDSGKLSALKFQKPRLVI-------VNDRKQLVNEI------------F 390
Query: 83 TTPAELSE---KLTTCSTNLKPLVLYQ-LIRKHAMQGVLCFVNTAQGAHRLARLLHHIDN 138
P+ LSE + T ++KPL+L + L+ + + VL F + + + RL +LL
Sbjct: 391 NVPSSLSEYTIQFGTAKASIKPLILAKYLLENNKLSNVLIFTKSNEASIRLCKLLE---- 446
Query: 139 VATKGAGTKMNIAEVYS-DLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVIN 197
+ MNIA + S + K R KI+++F +KI+++VA+D +ARGID+ +I VIN
Sbjct: 447 LMFGKLHPSMNIAYINSTNNKSAIRTKILKDFSTQKINILVATDLIARGIDILSITDVIN 506
Query: 198 YEAPDNIKKYIHRIGRTARGGRQGTSVTL 226
Y+ P++ ++Y+HR+GRTAR + G + TL
Sbjct: 507 YDLPNSSREYVHRVGRTARANQTGHAYTL 535
>sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana
GN=RH1 PE=2 SV=3
Length = 522
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 33/213 (15%)
Query: 19 YPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGF 78
YP R +++ SATL+ DP KL QL L P T TG +
Sbjct: 267 YP-RLVKMVLSATLTQDPSKLIQLDLHHPLFMT-------TGGS---------------- 302
Query: 79 IGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDN 138
++ P +L C T +KP+ L L++ + + F ++ + RL +LL+ +
Sbjct: 303 --RYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGD 360
Query: 139 VATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINY 198
K+ E L R+K ++ FR+ I ++VASD L RG+DV+ + VINY
Sbjct: 361 -------PKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINY 413
Query: 199 EAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
+ P K +IHR GRTAR G+ G TL++ HE
Sbjct: 414 DMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHE 446
>sp|Q6CJV1|DRS1_KLULA ATP-dependent RNA helicase DRS1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DRS1 PE=3 SV=1
Length = 748
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 37/211 (17%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS+ Q LLFSAT++ ++L LSL +P +++P + AD L+ FI
Sbjct: 409 PSKRQTLLFSATMNSKIKQLISLSLKKP--VRIMIDPP----------KQAADKLTQEFI 456
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRK---HAMQGVLCFVNTAQGAHRLARLLHHI 136
+LKP +LYQLIRK + + ++ FV + AH+L +L +
Sbjct: 457 ------------RIRKRDHLKPALLYQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLL 504
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M + E++ L +QR + + F+ ++ +++ +D +RG+D+ I+VVI
Sbjct: 505 G----------MQVGELHGSLTQEQRLQSVNNFKSLQVPVLICTDLASRGLDIPKIEVVI 554
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
N++ P + Y+HR+GRTAR GR+G SVT V
Sbjct: 555 NFDMPKTYEIYLHRVGRTARAGREGRSVTFV 585
>sp|A5E726|DBP6_LODEL ATP-dependent RNA helicase DBP6 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP6 PE=3 SV=1
Length = 663
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 12 MWDTFLTYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGA 71
++D + + Q+ +FSATL+ D KL L P+L D+Q +E
Sbjct: 410 VYDVANVWSLKVQKFIFSATLTTDAGKLASLDFHNPRLLI-------VNDSQRLVNEL-- 460
Query: 72 DNLSSGFIGKFTTPAELSE-KLT--TCSTNLKPLVLYQ-LIRKHAMQGVLCFVNTAQGAH 127
F+ PA LSE KL ++LKPL+L + LI + + VL F + + +
Sbjct: 461 ----------FSVPAMLSEYKLNFGVAKSSLKPLILAKFLIAQEKLSDVLVFTKSNESSI 510
Query: 128 RLARLLHHIDNVATKGAGTK---MNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLA 184
RL LL I + K MN+ + L R+KI+++F +KI+++VA+D +A
Sbjct: 511 RLCTLLQAIFDRICLQEKVKVGFMNLTNNRTSL----RSKILKDFTSQKINILVATDLIA 566
Query: 185 RGIDVENIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
RG+DV +I V+NY+ ++ ++Y+HR+GRTAR + G + LV
Sbjct: 567 RGLDVTSIKDVVNYDLLNSSREYVHRVGRTARANQAGNAYNLV 609
>sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP6 PE=3 SV=1
Length = 607
Score = 100 bits (249), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 30/206 (14%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q L+FSATL+ +PE + + + P +F G+ D+ ++
Sbjct: 386 QTLIFSATLTANPEHIASMDIHNPGVFV-----IGSSDS-------------------YS 421
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHID-NVATK 142
P L+E +T S KPL+L +L+ + + + F +++ A R+AR++ +D ++ K
Sbjct: 422 IPKSLTEIVTHVSAAEKPLMLCELLVQRDINRGVVFTKSSETAARVARMMEIMDADIFHK 481
Query: 143 GAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPD 202
IA V ++ R + +++F KID +V +D ++RGID +D VINY+ P
Sbjct: 482 D----WKIAAVSAETSSVHRRRSMKQFIDGKIDFLVCTDLVSRGIDF-VVDNVINYDIPS 536
Query: 203 NIKKYIHRIGRTARGGRQGTSVTLVT 228
++Y+HR+GRTAR GR+G + T +T
Sbjct: 537 GKREYVHRVGRTARAGREGNAYTFLT 562
>sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP6 PE=3 SV=1
Length = 606
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 28/203 (13%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q+L+FSATL+ D KL L + P+L D++ +E FT
Sbjct: 367 QKLVFSATLTTDAGKLSSLKFYNPRLII-------VNDSKQLVNEI------------FT 407
Query: 84 TPAELSE---KLTTCSTNLKPLVLYQ-LIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNV 139
P LSE L +LKPL+L + LI + + VL F + + + RL LL +
Sbjct: 408 VPVTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLISL--- 464
Query: 140 ATKGAGTKMNIAEVYS-DLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINY 198
+ + IA + S + + R+KI+++F +++++++ +D +ARGIDV +I VINY
Sbjct: 465 -FQKLSINLKIAFINSTNNRTSIRSKILKQFSNQEVNILITTDLIARGIDVASITDVINY 523
Query: 199 EAPDNIKKYIHRIGRTARGGRQG 221
+ P++ ++Y+HR+GRTAR + G
Sbjct: 524 DLPNSSREYVHRVGRTARANQVG 546
>sp|Q75F95|DRS1_ASHGO ATP-dependent RNA helicase DRS1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DRS1
PE=3 SV=1
Length = 734
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 37/211 (17%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS+ Q LLFSAT++ ++L LSL +P +++P + A+ L+ F+
Sbjct: 395 PSKRQTLLFSATMNSRIKQLISLSLKKP--VRIMIDP----------PKQAANKLTQEFV 442
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQG---VLCFVNTAQGAHRLARLLHHI 136
L ++ +LKP +LY L+RK G ++ FV + AHRL +L +
Sbjct: 443 -------RLRKR-----EHLKPALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLL 490
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M E++ L +QR + + F+ + ++V +D +RG+D+ I+VVI
Sbjct: 491 G----------MKAGELHGSLTQEQRLQSVNNFKSLDVPVLVCTDLASRGLDIPKIEVVI 540
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
NY+ P + Y+HR+GRTAR GR+G SVTLV
Sbjct: 541 NYDMPKTYEIYLHRVGRTARAGREGKSVTLV 571
>sp|Q6CX73|FAL1_KLULA ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=FAL1 PE=3 SV=1
Length = 398
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 37/221 (16%)
Query: 12 MWDTFLTYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGA 71
++D F P Q ++ SAT+S D ++E + P
Sbjct: 188 IYDIFTKLPPTIQVVVVSATMSKD-----------------ILEITKKFMSDPVKILVKR 230
Query: 72 DNLSSGFIGKFTTPAELSE-KLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLA 130
D +S I ++ E E K T L + Q + F NT + L+
Sbjct: 231 DEISLDVIKQYYVDVEKEEWKFDTLCDLYDSLTITQCV---------IFCNTRKKVDWLS 281
Query: 131 RLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVE 190
R L T +++ ++ D+K ++R++++ +FR K +++++D ARGIDV+
Sbjct: 282 RKLTQ----------TNFSVSSMHGDMKQEERDQVMNDFRSGKARVLISTDVWARGIDVQ 331
Query: 191 NIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
I +VINY+ PDN++ YIHRIGR+ R GR+G ++ +T E
Sbjct: 332 QISLVINYDIPDNLENYIHRIGRSGRFGRKGVAINFITKEE 372
>sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DRS1 PE=1 SV=2
Length = 752
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 37/211 (17%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS Q LLFSAT++ + L LSL +P +++P + A L+ F+
Sbjct: 407 PSNRQNLLFSATMNSKIKSLVSLSLKKP--VRIMIDPP----------KKAATKLTQEFV 454
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQG---VLCFVNTAQGAHRLARLLHHI 136
+LKP +L+ LIRK G ++ FV + AHRL ++ +
Sbjct: 455 ------------RIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLL 502
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M++ E++ L +QR + +F+ ++ +++ +D +RG+D+ I+VVI
Sbjct: 503 G----------MSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVI 552
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
NY+ P + + Y+HR+GRTAR GR+G SVT V
Sbjct: 553 NYDMPKSYEIYLHRVGRTARAGREGRSVTFV 583
>sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DRS1 PE=3 SV=1
Length = 754
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 37/211 (17%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS Q LLFSAT++ + L LSL +P +++P + A L+ F+
Sbjct: 409 PSNRQNLLFSATMNSKIKSLVSLSLKKP--VRIMIDPP----------KKAATKLTQEFV 456
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQG---VLCFVNTAQGAHRLARLLHHI 136
+LKP +L+ LIRK G ++ FV + AHRL ++ +
Sbjct: 457 ------------RIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLL 504
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M++ E++ L +QR + +F+ ++ +++ +D +RG+D+ I+VVI
Sbjct: 505 G----------MSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVI 554
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
NY+ P + + Y+HR+GRTAR GR+G SVT V
Sbjct: 555 NYDMPKSYEIYLHRVGRTARAGREGRSVTFV 585
>sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=HAS1 PE=3 SV=2
Length = 569
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 34/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q +LFSAT + E L ++SL L+ +VV P + + AD L G++
Sbjct: 286 QSMLFSATQTTKVEDLARISLRAGPLYINVV---------PETEVSTADGLEQGYV---- 332
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKG 143
TC ++++ L+L+ +R++ + ++ F+++ LL++ID
Sbjct: 333 ----------TCDSDMRFLLLFSFLRRNIKKKIIVFLSSCNCVKYFGELLNYID------ 376
Query: 144 AGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDN 203
+ + +++ K +R EF K +++ +D ARG+D+ +D +I ++ PD+
Sbjct: 377 ----LPVLDLHGKQKQQKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDPPDD 432
Query: 204 IKKYIHRIGRTARG-GRQGTSVTLVTTHE 231
+ YIHR+GRTARG G +G S+ +T E
Sbjct: 433 PRDYIHRVGRTARGTGGKGKSLMFLTPSE 461
>sp|Q9ZRZ8|RH28_ARATH DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana
GN=RH28 PE=2 SV=1
Length = 789
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 41/213 (19%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
P R Q +LFSAT++ + ++L +LSL +P ++ +P+
Sbjct: 342 PKRRQTMLFSATMTEEVKELVKLSLNKPLRLSA--DPSAR-------------------- 379
Query: 80 GKFTTPAELSEKLT----TCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHH 135
P L+E++ T N + VL L + V+ F T Q AHRL ++L
Sbjct: 380 ----RPPGLTEEVVRIRRTREAN-QEAVLLSLCTRTFKSKVIIFSGTKQAAHRL-KILFG 433
Query: 136 IDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVV 195
+ AG K AE++ +L QR ++ FR++++D ++A+D ARG+D+ + V
Sbjct: 434 L-------AGLKA--AELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTV 484
Query: 196 INYEAPDNIKKYIHRIGRTARGGRQGTSVTLVT 228
INY P I Y+HR+GRTAR GR+G +VT VT
Sbjct: 485 INYACPREIDSYVHRVGRTARAGREGYAVTFVT 517
>sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DRS1 PE=3 SV=3
Length = 741
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 37/214 (17%)
Query: 17 LTYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSS 76
L ++ Q LLFSAT++ + L QLSL +P +++P T T+ L+
Sbjct: 396 LIPKNKRQTLLFSATMNTKIQDLIQLSLQRP--VRIMIDPPKTAATK----------LTQ 443
Query: 77 GFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRK--HAMQG-VLCFVNTAQGAHRLARLL 133
F+ +LKP +L+QL++K A Q ++ FV+ + AH+L +L
Sbjct: 444 EFV------------RIRKRDHLKPALLFQLLKKLDPAQQSRIVVFVSRKESAHKLRIVL 491
Query: 134 HHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENID 193
+ M ++E++ L +QR + +F++ + +++ +D ARG+D+ I+
Sbjct: 492 GLLG----------MKVSELHGSLTQEQRLNNVNDFKKLIVPVLICTDLAARGLDIPKIE 541
Query: 194 VVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
+VINY+ P + + Y+HR+GRTAR GR GTS++ V
Sbjct: 542 IVINYDMPKSHEVYLHRVGRTARAGRDGTSISFV 575
>sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DRS1 PE=3 SV=1
Length = 725
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 37/211 (17%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS+ Q LLFSAT++ ++L LSL +P +++P T+ L+ F+
Sbjct: 382 PSKRQTLLFSATMNSRIKQLISLSLKRP--VRIMIDPPKQAATK----------LTQEFV 429
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRK---HAMQGVLCFVNTAQGAHRLARLLHHI 136
+LKP +L+ LIRK + + ++ FV AH+L +L +
Sbjct: 430 ------------RIRKRDHLKPSLLFNLIRKLDPNGQKRIVVFVARKDMAHKLRIILGLL 477
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M +AE++ L +QR + +F+ ++ +++ +D +RG+D+ I+VVI
Sbjct: 478 G----------MAVAELHGSLTQEQRLDSVNKFKSLQVPVLICTDLASRGLDIPKIEVVI 527
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
NY+ P + + Y+HR+GRTAR GR+G S+T V
Sbjct: 528 NYDMPKSYEIYLHRVGRTARAGREGRSITFV 558
>sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRP3 PE=3 SV=1
Length = 493
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 27 LFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFTTPA 86
LFSAT++ +KL + SL P + K+ T
Sbjct: 253 LFSATMTSKIDKLQRASLTNP--------------------------VKCAVSNKYQTVD 286
Query: 87 ELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKGAGT 146
L + L LK L L+ + + V+ F T A RL+ L + ++ AT
Sbjct: 287 TLVQTLMVVPGGLKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLCNLLEFSAT----- 341
Query: 147 KMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDNIKK 206
++ DL +QR + F+ K ++VA+D ARG+D+ ++D+VINY+ P + K
Sbjct: 342 -----ALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKS 396
Query: 207 YIHRIGRTARGGRQGTSVTLVTTHE 231
YIHR+GRTAR GR G S++LV+ ++
Sbjct: 397 YIHRVGRTARAGRSGKSISLVSQYD 421
>sp|Q6BPT8|DBP6_DEBHA ATP-dependent RNA helicase DBP6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP6 PE=3 SV=2
Length = 576
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 27/203 (13%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q+++FSATL+ D KL L +P+L +N F+
Sbjct: 333 QKMIFSATLTTDAGKLSLLKFHKPRLII-------------------VNNKEQLVNEMFS 373
Query: 84 TPAELSE---KLTTCSTNLKPLVLYQ-LIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNV 139
PA L+E + + ++LKPL+L + L+ K+ + VL F + + RL+RLL I N
Sbjct: 374 LPATLNEFKLQFGSAKSSLKPLILSKFLLSKNKLANVLIFTKSNDASLRLSRLLSLIMN- 432
Query: 140 ATKGAGTKMNIAEVYS-DLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINY 198
K +NIA + S + R+KI+++F ++ I+++VA+D +ARGID+ +I VINY
Sbjct: 433 --KLGSETINIAYINSTNNTTSVRSKILKDFSKQTINILVATDLIARGIDILSITDVINY 490
Query: 199 EAPDNIKKYIHRIGRTARGGRQG 221
+ P++ ++Y+HR+GRTAR ++G
Sbjct: 491 DLPNSSREYVHRVGRTARANQEG 513
>sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DRS1 PE=3 SV=1
Length = 613
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 35/204 (17%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q LLFSAT++ + L QLSL +P +++P P S ++S + +F
Sbjct: 309 QTLLFSATMNTRIQDLIQLSLQKP--VRIMIDP-------PKS-------VASKLLQQFV 352
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKG 143
LKP +LYQL+ K V+ FV + AHRL +L +
Sbjct: 353 R--------IRKRDQLKPALLYQLL-KGVSSRVVVFVARKETAHRLRIVLGLLG------ 397
Query: 144 AGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDN 203
+ ++E++ L +QR + ++ F+ ++ +++ +D ARG+D+ I++VINY+ P
Sbjct: 398 ----LKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKT 453
Query: 204 IKKYIHRIGRTARGGRQGTSVTLV 227
+ Y+HR+GRTAR GR GTS+T V
Sbjct: 454 FEIYLHRVGRTARAGRDGTSITFV 477
>sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAS1 PE=1 SV=1
Length = 505
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 34/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q +LFSAT + E L ++SL LF +VV P + + AD L G++
Sbjct: 223 QSMLFSATQTTKVEDLARISLRPGPLFINVV---------PETDNSTADGLEQGYV---- 269
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKG 143
C ++ + L+L+ ++++ + ++ F+++ A LL++ID
Sbjct: 270 ----------VCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYID------ 313
Query: 144 AGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDN 203
+ + E++ K +R EF + +++ +D ARG+D+ +D +I ++ PD+
Sbjct: 314 ----LPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDD 369
Query: 204 IKKYIHRIGRTARGGR-QGTSVTLVTTHE 231
+ YIHR+GRTARG + +G S+ +T +E
Sbjct: 370 PRDYIHRVGRTARGTKGKGKSLMFLTPNE 398
>sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium
discoideum GN=ddx49 PE=3 SV=1
Length = 508
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 17 LTYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSS 76
L P + Q LLFSAT++ + KL ++L +P +F DN
Sbjct: 175 LPPPEKRQTLLFSATMTKNLTKLDSIALNKPFIF--------------------EDN--- 211
Query: 77 GFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHI 136
K+ T L ++ K L +++KH + FVN
Sbjct: 212 ---SKYDTVDTLKQEYIYMPAPTKDCYLVYILKKHEGSSAIVFVNNCYAVE--------- 259
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKI--IQEFRRRKIDLVVASDNLARGIDVENIDV 194
A KG K++I V DQ++++ ++ F+ K+ ++VA+D +RG+D+ ++ +
Sbjct: 260 ---AVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDVQI 316
Query: 195 VINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
VINY+ ++ K YIHR+GRTAR GR G +++ +T H+
Sbjct: 317 VINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHD 353
>sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=RRP3 PE=3 SV=2
Length = 539
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 42/215 (19%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
P + LFSAT+++ EKL + SL P +
Sbjct: 295 PIKRTTYLFSATMTNKIEKLQRASLHNP--------------------------VRVAVS 328
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHR---LARLLHHI 136
K+ T L + + + K +L L+ + + ++ F T A R LAR+L
Sbjct: 329 SKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARIL--- 385
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
N ++ L QR + +F+ + +++VA+D ARG+D+ ++DVVI
Sbjct: 386 ----------GFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVI 435
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
NY+ P + K YIHR+GRTAR GR G S++L+T ++
Sbjct: 436 NYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYD 470
>sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRP3 PE=3 SV=1
Length = 487
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 27 LFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFTTPA 86
LFSAT++ +KL + SL P + K+ T
Sbjct: 247 LFSATMTSKIDKLQRASLTNP--------------------------VKCAVSNKYQTVD 280
Query: 87 ELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKGAGT 146
L + L LK L L+ + + + F T A R++ L + ++ AT
Sbjct: 281 TLVQTLMVVPGGLKNTFLIYLLNEFIGKSTIVFTRTKANAERISNLCNLLEFSAT----- 335
Query: 147 KMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDNIKK 206
++ DL +QR + F+ K ++VA+D ARG+D+ ++D+VINY+ P + K
Sbjct: 336 -----ALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKS 390
Query: 207 YIHRIGRTARGGRQGTSVTLVTTHE 231
YIHR+GRTAR GR G S++LV+ ++
Sbjct: 391 YIHRVGRTARAGRSGKSISLVSQYD 415
>sp|Q74Z73|HAS1_ASHGO ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=HAS1
PE=3 SV=2
Length = 504
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 34/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q +LFSAT + E L ++SL LF +V D++ +S A D L G++
Sbjct: 220 QSMLFSATQTTKVEDLARISLRPGPLFINV-------DSEKETSTA--DGLEQGYV---- 266
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKG 143
C ++ + L+L+ ++K + ++ F+++ A LL++ID
Sbjct: 267 ----------VCDSDKRFLLLFTFLKKFQNKKIIVFLSSCNSVKYYAELLNYID------ 310
Query: 144 AGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDN 203
+ + E++ K +R EF + ++V +D ARG+D+ +D +I ++ PD+
Sbjct: 311 ----LPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDD 366
Query: 204 IKKYIHRIGRTARGGR-QGTSVTLVTTHE 231
+ YIHR+GRTARG + +G S+ +T HE
Sbjct: 367 PRDYIHRVGRTARGTKGKGKSLMFLTPHE 395
>sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=HAS1 PE=3 SV=2
Length = 567
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 34/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q +LFSAT + E L ++SL L+ +VV P ++ + AD L G++
Sbjct: 284 QSMLFSATQTTKVEDLARISLRPGPLYINVV---------PETAASTADGLEQGYV---- 330
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKG 143
C ++ + L+L+ ++K++ + ++ F+++ LL++ID
Sbjct: 331 ----------VCDSDKRFLLLFSFLKKYSKKKIIVFLSSCNSVKYFGELLNYID------ 374
Query: 144 AGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDN 203
+ + +++ K +R EF K +V +D ARG+D+ +D +I ++ PD+
Sbjct: 375 ----LPVLDLHGKQKQQKRTNTFFEFCNAKQGTLVCTDVAARGLDIPAVDWIIQFDPPDD 430
Query: 204 IKKYIHRIGRTARGGR-QGTSVTLVTTHE 231
+ YIHR+GRTARG +G S+ +T E
Sbjct: 431 PRDYIHRVGRTARGSNGKGKSLMFLTPSE 459
>sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp.
japonica GN=Os12g0481100 PE=2 SV=2
Length = 802
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 39/212 (18%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
P R Q +LFSAT++ + +L LSL +P + P+
Sbjct: 369 PRRRQTMLFSATMTEEINELVTLSLNKPVRL----------EADPS-------------- 404
Query: 80 GKFTTPAELSE---KLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHI 136
PA L+E ++ + VL L K V+ F T AHRL +++ +
Sbjct: 405 --LKRPATLTEEVVRIRRAREANQEAVLLALCLKTFKDKVIIFSGTKHSAHRL-KIIFGL 461
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M AE++ +L QR + ++ F+++++D ++A+D ARGID+ + VI
Sbjct: 462 SG---------MKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVI 512
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLVT 228
N+ P + + Y+HR+GRTAR GR+G +VT VT
Sbjct: 513 NFSCPRDARTYLHRVGRTARAGREGYAVTFVT 544
>sp|A7TJM9|DRS1_VANPO ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1
Length = 752
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 37/211 (17%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS+ Q LLFSAT++ + L LSL +P ++ P + A L+ F+
Sbjct: 407 PSKRQTLLFSATMNSRIKSLISLSLRKP--VRIMINPP----------KQAAARLTQEFV 454
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQG---VLCFVNTAQGAHRLARLLHHI 136
+LKP +L+ LIRK G ++ FV + AH+L +L +
Sbjct: 455 ------------RIRKRDHLKPALLFYLIRKLDGTGQKRIVVFVARKEMAHKLRIILGLL 502
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
M + E++ L +QR + + F+ ++ +++ +D +RG+D+ I+VVI
Sbjct: 503 G----------MKVGELHGSLTQEQRLQSVNNFKSLEVPVLICTDLASRGLDIPKIEVVI 552
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
N++ P + + Y+HR+GRTAR GR+G SVT V
Sbjct: 553 NFDMPKSYEIYLHRVGRTARAGREGRSVTFV 583
>sp|Q4P9P3|DRS1_USTMA ATP-dependent RNA helicase DRS1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DRS1 PE=3 SV=1
Length = 932
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQP-KLFTSVVEPAGTGDTQPTSS-------EAGADNLS 75
Q +LFSAT++ D E+L +LSL +P +LF V+P T + G +
Sbjct: 517 QTMLFSATMTDDVEQLVRLSLKRPVRLF---VDPKRTTAKKLIQEFVRVRGTGTGGVAGA 573
Query: 76 SGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHH 135
G G PA +P +L L + + FV + + AH+L +
Sbjct: 574 DGLSGIQDQPATWISGGRKSEDAQRPALLLSLCTRTFTSQTMIFVRSKKLAHQLKIVFGL 633
Query: 136 IDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVV 195
+ ++ E++ DL +QR + +FR K D ++A+D +RG+D++ + V
Sbjct: 634 LG----------LSAGELHGDLSQEQRIDALTDFRDGKTDFLLATDLASRGLDIKGVQTV 683
Query: 196 INYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
INY+ P + Y+HR+GRTAR GR G +VTLV
Sbjct: 684 INYDMPGQFEAYLHRVGRTARAGRNGRAVTLV 715
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=HAS1 PE=3 SV=1
Length = 605
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 33/220 (15%)
Query: 12 MWDTFLTYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGA 71
M + P Q +LFSAT + E L ++SL + L+ +V D SS A
Sbjct: 299 MKEIIKILPKERQSMLFSATQTTKVEDLARISLKKGPLYLNV-------DEHNVSSTA-- 349
Query: 72 DNLSSGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLAR 131
+ L G++ C ++ + L+L+ ++++A + ++ F+++
Sbjct: 350 EGLEQGYV--------------VCDSDKRFLLLFSFLKRNAGKKIIVFLSSCNSVKFYGE 395
Query: 132 LLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVEN 191
LL++ID + + +++ K +R EF K +++ +D ARG+D+
Sbjct: 396 LLNYID----------LPVLDLHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGLDIPK 445
Query: 192 IDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
+D +I ++ PD+ + YIHR+GRTARG G S+ +T E
Sbjct: 446 VDWIIQFDPPDDPRDYIHRVGRTARGSASGKSIMFLTPSE 485
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 34/215 (15%)
Query: 18 TYPSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSG 77
+ P+ Q +LFSATL+ + + L +LSL QP + Q TS+ L
Sbjct: 363 SCPTNRQTMLFSATLNDEVKTLAKLSLQQP------IRVQVDALMQVTST------LEQE 410
Query: 78 FIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQ-GVLCFVNTAQGAHRLARLLHHI 136
F+ P LS+ +P +L L + Q G + F + + HRL R++ +
Sbjct: 411 FVK--IKPQHLSD---------RPAILLSLCTRVFNQGGTIIFCRSKKEVHRL-RIIFGL 458
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
+ + AE++ +L +QR +Q+FR +++ ++ASD +RG+D+ + VI
Sbjct: 459 SD---------LKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVI 509
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
NY P+N+ YIHR+GRTAR G G S + +T ++
Sbjct: 510 NYNMPNNMANYIHRVGRTARAGMDGKSCSFITDND 544
>sp|Q75EW9|RRP3_ASHGO ATP-dependent rRNA helicase RRP3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRP3
PE=3 SV=2
Length = 486
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 27 LFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFTTPA 86
LFSAT++ +KL + SL P + K+ T
Sbjct: 246 LFSATMTSKIDKLQRASLTNP--------------------------VKCAVSNKYQTVD 279
Query: 87 ELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKGAGT 146
L + L LK L L+ + + + F T A R++ L + ++ AT
Sbjct: 280 TLVQTLIVVPGGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLCNLLEFSATA---- 335
Query: 147 KMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDNIKK 206
++ DL +QR + F+ K ++VA+D ARG+D+ ++D+VINY+ P + K
Sbjct: 336 ------LHGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIPVDSKS 389
Query: 207 YIHRIGRTARGGRQGTSVTLVTTHE 231
YIHR+GRTAR GR G SV+LV+ ++
Sbjct: 390 YIHRVGRTARAGRSGKSVSLVSQYD 414
>sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRP3 PE=3 SV=1
Length = 501
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 27 LFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFTTPA 86
LFSAT++ +KL + SL P + K+ T
Sbjct: 261 LFSATMTSKIDKLQRASLTNP--------------------------VKCAVSNKYQTVD 294
Query: 87 ELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKGAGT 146
L + L LK L L+ + + ++ F T A RL+ L + ++ AT
Sbjct: 295 TLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATA---- 350
Query: 147 KMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDNIKK 206
++ DL +QR + F+ K ++VA+D ARG+D+ ++D+V+NY+ P + K
Sbjct: 351 ------LHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKS 404
Query: 207 YIHRIGRTARGGRQGTSVTLVTTHE 231
YIHR+GRTAR GR G S++LV+ ++
Sbjct: 405 YIHRVGRTARAGRSGKSISLVSQYD 429
>sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27
PE=2 SV=1
Length = 765
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 35/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQP-KLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKF 82
Q +LFSAT++ + + L +SL P ++F + D P L FI
Sbjct: 366 QTMLFSATMTDEVKDLASVSLKNPVRIFVN-----SNTDVAPF--------LRQEFI--- 409
Query: 83 TTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATK 142
++ + ++ L+ + V+ F T + AHR+ LL +
Sbjct: 410 --------RIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMG----- 456
Query: 143 GAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPD 202
+ + E++ +L QR + ++ F+ +ID++VA+D ARG+D+E + VIN+ P+
Sbjct: 457 -----LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPN 511
Query: 203 NIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
IK Y+HR+GRTAR GR G SV+LV E
Sbjct: 512 TIKHYVHRVGRTARAGRAGRSVSLVGEEE 540
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 27 LFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFTTPA 86
LFSAT++ +KL + SL P + K+ T
Sbjct: 261 LFSATMTSKIDKLQRASLTNP--------------------------VKCAVSNKYQTVD 294
Query: 87 ELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKGAGT 146
L + L LK L L+ + + ++ F T A RL+ L + ++ AT
Sbjct: 295 TLVQTLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATA---- 350
Query: 147 KMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDNIKK 206
++ DL +QR + F+ K ++VA+D ARG+D+ ++D+V+NY+ P + K
Sbjct: 351 ------LHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKS 404
Query: 207 YIHRIGRTARGGRQGTSVTLVTTHE 231
YIHR+GRTAR GR G S++LV+ ++
Sbjct: 405 YIHRVGRTARAGRSGKSISLVSQYD 429
>sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=RRP3 PE=3 SV=1
Length = 485
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 12 MWDTFLTYPSRPQR-LLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAG 70
+ D L R +R LFSAT+S E L + SL P L S+
Sbjct: 222 ILDKILKVLPRERRTYLFSATMSSKVESLQRASLSNP-LRVSISS--------------- 265
Query: 71 ADNLSSGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLA 130
K+ T A L + K + L L+ ++A Q + F T RLA
Sbjct: 266 ---------NKYQTVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLA 316
Query: 131 RLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVE 190
LL + G G+ ++ L R + +FR R D++VA+D ARG+D+
Sbjct: 317 ILLRAL------GFGS----IPLHGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIP 366
Query: 191 NIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
++DVV+N++ P + K YIHR+GRTAR G+ G + ++VT ++
Sbjct: 367 SVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYD 407
>sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=RRP3 PE=3 SV=1
Length = 506
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 27 LFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFTTPA 86
LFSAT++ +KL + SL P + K+ T
Sbjct: 266 LFSATMTSKIDKLQRASLTNP--------------------------VKCAVSNKYQTVD 299
Query: 87 ELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKGAGT 146
L + L LK L L+ + + ++ F T A R+ L + ++ AT
Sbjct: 300 TLVQTLIVVPGGLKNTYLIYLMNEFIGKTIIVFTRTKANAERITTLANLLEFSAT----- 354
Query: 147 KMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDNIKK 206
++ DL +QR + F+ + ++VA+D ARG+D+ ++D+VINY+ P + K
Sbjct: 355 -----ALHGDLNQNQRTGSLDLFKAGRRSILVATDVAARGLDIPSVDIVINYDIPVDSKS 409
Query: 207 YIHRIGRTARGGRQGTSVTLVTTHE 231
YIHR+GRTAR GR G S++LV+ ++
Sbjct: 410 YIHRVGRTARAGRSGKSISLVSQYD 434
>sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DRS1 PE=3 SV=2
Length = 705
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 37/207 (17%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q +LFSAT++ + L QLSL +P +V P + A L F+
Sbjct: 379 QTMLFSATMNTKIQDLIQLSLDKP--VRIMVNPP----------KQAASKLVQEFV---- 422
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIR---KHAMQGVLCFVNTAQGAHRLARLLHHIDNVA 140
+LKP +LY L+R ++ FV+ + AHRL +L +
Sbjct: 423 --------RIRKREHLKPALLYHLLRLVDPQQQNRIVVFVSRKEMAHRLRIVLGLLG--- 471
Query: 141 TKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEA 200
M ++E++ L +QR + +++FR + +++ +D ARG+D+ I++VIN++
Sbjct: 472 -------MKVSELHGSLTQEQRLQSVKDFRSLAVPVLICTDLAARGLDIPKIEIVINFDM 524
Query: 201 PDNIKKYIHRIGRTARGGRQGTSVTLV 227
P + Y+HR+GRTAR GR+G S+T V
Sbjct: 525 PKTHEIYLHRVGRTARAGREGRSITFV 551
>sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 OS=Homo sapiens GN=DDX27
PE=1 SV=2
Length = 796
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 10/116 (8%)
Query: 116 VLCFVNTAQGAHRLARLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKID 175
V+ F T + AHR+ LL + + + E++ +L QR + ++ F+ +ID
Sbjct: 466 VMLFTQTKKQAHRMHILLGLMG----------LQVGELHGNLSQTQRLEALRRFKDEQID 515
Query: 176 LVVASDNLARGIDVENIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
++VA+D ARG+D+E + VIN+ P+ IK Y+HR+GRTAR GR G SV+LV E
Sbjct: 516 ILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDE 571
>sp|Q58083|H669_METJA Probable ATP-dependent RNA helicase MJ0669 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0669 PE=1 SV=1
Length = 367
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 16/164 (9%)
Query: 73 NLSSGFIGKFT-----TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAH 127
NL+ ++G ++ A + + + N + L +L++ G L F T +
Sbjct: 194 NLAKKYMGDYSFIKAKINANIEQSYVEVNENERFEALCRLLKNKEFYG-LVFCKTKRDTK 252
Query: 128 RLARLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGI 187
LA +L I A GA ++ DL QR K+I+ F+++KI +++A+D ++RGI
Sbjct: 253 ELASMLRDIGFKA--GA--------IHGDLSQSQREKVIRLFKQKKIRILIATDVMSRGI 302
Query: 188 DVENIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
DV +++ VINY P N + Y+HRIGRT R G++G +++++ E
Sbjct: 303 DVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRRE 346
>sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=HAS1 PE=3 SV=1
Length = 497
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 34/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKFT 83
Q +LFSAT + E L ++SL LF +V D++ +S A D L G++
Sbjct: 215 QSMLFSATQTTKVEDLARISLRPGPLFINV-------DSEKDTSTA--DGLEQGYV---- 261
Query: 84 TPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATKG 143
C ++ + L+L+ ++++ + V+ F+++ A LL++ID
Sbjct: 262 ----------VCESDKRFLLLFSFLKRNQKKKVIVFLSSCNSVKYYAELLNYID------ 305
Query: 144 AGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPDN 203
+ + E++ K +R EF + ++V +D ARG+D+ +D +I ++ PD+
Sbjct: 306 ----LPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDD 361
Query: 204 IKKYIHRIGRTARGGR-QGTSVTLVTTHE 231
+ YIHR+GRTARG + +G S+ +T E
Sbjct: 362 PRDYIHRVGRTARGTKGKGKSLMFLTPTE 390
>sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus GN=Ddx27
PE=1 SV=3
Length = 760
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 24 QRLLFSATLSHDPEKLHQLSLFQP-KLFTSVVEPAGTGDTQPTSSEAGADNLSSGFIGKF 82
Q +LFSAT++ + + L +SL P ++F + D P L FI
Sbjct: 363 QTMLFSATMTDEVKDLASVSLKNPVRIFVN-----SNTDVAPF--------LRQEFI--- 406
Query: 83 TTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDNVATK 142
++ + ++ L+ + V+ F T + AHR+ HI
Sbjct: 407 --------RIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRM-----HILLGLLG 453
Query: 143 GAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINYEAPD 202
+ + E++ +L QR + ++ F+ +ID++VA+D ARG+D+E + VIN+ P+
Sbjct: 454 -----LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPN 508
Query: 203 NIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
+K Y+HR+GRTAR GR G SV+LV E
Sbjct: 509 TVKHYVHRVGRTARAGRAGRSVSLVGEEE 537
>sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp8
PE=3 SV=1
Length = 525
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 15 TFLTYPSRPQRLLFSATLSHDPEKLHQL--SLFQPKLFTSVVEPAGTGDTQPTSSEAGAD 72
+FL PS+ Q LLF+ATL+ + L + + +P +F + + S+EA
Sbjct: 270 SFLPGPSQRQTLLFTATLTPEVRALKSMPQTPGKPPIFVTEI-----------STEA--- 315
Query: 73 NLSSGFIGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHA--MQGVLCFVNTAQGAHRLA 130
K T P L + L+ L+ + + + F NT + A L
Sbjct: 316 --------KDTVPPTLRTTYVQVPLTHREAFLHVLLSTESNITKSAIVFTNTTKSADLLE 367
Query: 131 RLLHHIDNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVE 190
RLL + + + ++S L +RN + FR ++VA+D +RG+D+
Sbjct: 368 RLLRSLGH----------RVTSLHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIP 417
Query: 191 NIDVVINYEAPDNIKKYIHRIGRTARGGRQGTSVTLV 227
++ +V+N+E P N Y+HR+GRTAR GR G +VTLV
Sbjct: 418 SVSLVVNFEVPRNPDDYVHRVGRTARAGRTGEAVTLV 454
>sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=drs1 PE=3 SV=1
Length = 754
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 35/208 (16%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQP-KLFTSVVEPAGTGDTQPTSSEAGADNLSSGF 78
P Q +LFSAT++ + L +LSL +P ++F D + T+++ L+ F
Sbjct: 434 PKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFV---------DNKKTTAKL----LTQEF 480
Query: 79 IGKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHRLARLLHHIDN 138
+ + EL L+P +L L ++ + + F + AH++ R++ +
Sbjct: 481 V-RVRPQREL----------LRPAMLIYLCKELFHRRTIIFFRSKAFAHKM-RVIFGL-- 526
Query: 139 VATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVINY 198
+N E++ L +QR + +++FR K + ++A+D +RGID++ I+VVINY
Sbjct: 527 -------LSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINY 579
Query: 199 EAPDNIKKYIHRIGRTARGGRQGTSVTL 226
EAP + Y+HR+GRTAR GR G ++TL
Sbjct: 580 EAPATHEVYLHRVGRTARAGRSGRAITL 607
>sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=RRP3 PE=3 SV=3
Length = 484
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 42/215 (19%)
Query: 20 PSRPQRLLFSATLSHDPEKLHQLSLFQPKLFTSVVEPAGTGDTQPTSSEAGADNLSSGFI 79
PS+ LFSAT+++ EKL + SL P +
Sbjct: 243 PSKRTTYLFSATMTNKIEKLQRASLHNP--------------------------VRVAVS 276
Query: 80 GKFTTPAELSEKLTTCSTNLKPLVLYQLIRKHAMQGVLCFVNTAQGAHR---LARLLHHI 136
K+ T L + + S K L L+ + + ++ F T R L R+L
Sbjct: 277 SKYQTADNLIQSMMLVSDGYKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRIL--- 333
Query: 137 DNVATKGAGTKMNIAEVYSDLKFDQRNKIIQEFRRRKIDLVVASDNLARGIDVENIDVVI 196
+ ++ DL QR + +F+ ++++A+D ARG+D+ ++DVVI
Sbjct: 334 ----------GFSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVVI 383
Query: 197 NYEAPDNIKKYIHRIGRTARGGRQGTSVTLVTTHE 231
NY+ P + K Y+HR+GRTAR GR G S++LVT ++
Sbjct: 384 NYDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYD 418
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,635,929
Number of Sequences: 539616
Number of extensions: 3367988
Number of successful extensions: 11553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 9576
Number of HSP's gapped (non-prelim): 1902
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)