Query psy951
Match_columns 428
No_of_seqs 297 out of 3008
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 21:22:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s94_A LRP-6, low-density lipo 100.0 9.6E-49 3.3E-53 412.8 32.5 296 1-425 141-444 (619)
2 4a0p_A LRP6, LRP-6, low-densit 100.0 3.5E-48 1.2E-52 409.0 33.7 293 1-425 137-441 (628)
3 3sov_A LRP-6, low-density lipo 100.0 2.1E-30 7.2E-35 251.7 20.9 172 1-179 136-311 (318)
4 3p5b_L Low density lipoprotein 100.0 8.4E-30 2.9E-34 255.3 19.5 172 1-177 216-398 (400)
5 1ijq_A LDL receptor, low-densi 100.0 3.2E-29 1.1E-33 243.2 20.4 171 1-176 134-315 (316)
6 3s94_A LRP-6, low-density lipo 100.0 8.1E-30 2.8E-34 268.5 16.9 168 1-177 449-618 (619)
7 3v64_C Agrin; beta propeller, 100.0 1.6E-29 5.6E-34 248.7 17.0 170 1-178 173-344 (349)
8 3m0c_C LDL receptor, low-densi 100.0 7.2E-29 2.5E-33 266.8 20.2 173 1-178 528-711 (791)
9 3p5b_L Low density lipoprotein 100.0 1E-28 3.5E-33 247.4 18.6 203 137-425 1-211 (400)
10 3v65_B Low-density lipoprotein 100.0 1.8E-28 6E-33 244.6 19.9 168 1-176 216-385 (386)
11 4a0p_A LRP6, LRP-6, low-densit 100.0 5.7E-29 2E-33 262.4 14.5 170 1-176 446-619 (628)
12 3v65_B Low-density lipoprotein 100.0 1.5E-28 5.1E-33 245.1 15.2 203 135-425 2-211 (386)
13 3v64_C Agrin; beta propeller, 99.9 3E-25 1E-29 218.2 28.3 204 1-424 87-295 (349)
14 3m0c_C LDL receptor, low-densi 99.9 1.4E-26 4.8E-31 249.1 17.7 204 136-425 312-523 (791)
15 3sov_A LRP-6, low-density lipo 99.9 1.5E-24 5E-29 210.6 28.1 203 1-423 49-257 (318)
16 1n7d_A LDL receptor, low-densi 99.9 7.8E-26 2.7E-30 241.6 14.8 173 1-178 510-693 (699)
17 1ijq_A LDL receptor, low-densi 99.9 9.4E-23 3.2E-27 197.6 28.8 103 1-107 44-153 (316)
18 1n7d_A LDL receptor, low-densi 99.9 5.4E-24 1.9E-28 227.3 15.2 205 135-425 293-505 (699)
19 1npe_A Nidogen, entactin; glyc 99.9 1.9E-19 6.7E-24 169.2 27.1 246 1-425 4-260 (267)
20 1npe_A Nidogen, entactin; glyc 99.7 1.1E-15 3.6E-20 143.5 25.3 121 1-125 50-174 (267)
21 3s25_A Hypothetical 7-bladed b 99.7 1.9E-15 6.4E-20 145.1 19.0 98 1-108 118-218 (302)
22 3s25_A Hypothetical 7-bladed b 99.6 6.2E-14 2.1E-18 134.5 22.7 104 1-115 28-147 (302)
23 3hrp_A Uncharacterized protein 99.4 7.2E-11 2.4E-15 118.0 26.8 75 29-107 129-204 (409)
24 3tc9_A Hypothetical hydrolase; 99.4 8.5E-11 2.9E-15 118.3 26.1 101 1-109 152-260 (430)
25 3tc9_A Hypothetical hydrolase; 99.3 1.5E-10 5.2E-15 116.4 23.0 103 323-425 269-408 (430)
26 4hw6_A Hypothetical protein, I 99.3 6.6E-10 2.3E-14 111.8 24.8 98 326-424 275-410 (433)
27 3hrp_A Uncharacterized protein 99.3 2.2E-09 7.7E-14 107.1 27.3 103 1-108 144-251 (409)
28 4hw6_A Hypothetical protein, I 99.3 5.8E-10 2E-14 112.2 22.3 103 1-106 195-304 (433)
29 1rwi_B Serine/threonine-protei 99.2 1.7E-09 5.9E-14 100.1 21.6 98 1-104 37-136 (270)
30 2qc5_A Streptogramin B lactona 99.1 4.9E-08 1.7E-12 91.2 25.2 100 1-105 33-133 (300)
31 1rwi_B Serine/threonine-protei 99.0 1.3E-08 4.3E-13 94.2 19.1 93 323-424 149-242 (270)
32 3fvz_A Peptidyl-glycine alpha- 99.0 7.7E-08 2.6E-12 92.6 24.9 95 11-107 70-176 (329)
33 1emn_A Fibrillin; extracellula 99.0 4.3E-10 1.5E-14 85.9 5.3 72 135-217 4-77 (82)
34 3kya_A Putative phosphatase; s 99.0 1.5E-07 5E-12 95.5 25.1 99 1-105 154-277 (496)
35 2vj3_A Neurogenic locus notch 99.0 5.6E-10 1.9E-14 93.8 6.0 77 135-223 44-122 (135)
36 2vj3_A Neurogenic locus notch 98.9 9.1E-10 3.1E-14 92.5 6.5 76 135-222 4-83 (135)
37 1lmj_A Fibrillin 1; EGF, calci 98.9 3.9E-10 1.3E-14 87.0 3.8 75 135-216 2-79 (86)
38 3kya_A Putative phosphatase; s 98.9 1.5E-07 5.1E-12 95.5 23.1 101 323-425 309-453 (496)
39 4d90_A EGF-like repeat and dis 98.9 1E-09 3.5E-14 93.0 6.0 78 135-224 51-137 (143)
40 3fvz_A Peptidyl-glycine alpha- 98.9 2.9E-07 9.8E-12 88.5 21.5 79 325-406 144-234 (329)
41 2p4o_A Hypothetical protein; p 98.8 8.1E-07 2.8E-11 84.5 23.8 92 326-424 171-263 (306)
42 1q7f_A NHL, brain tumor CG1071 98.8 5.5E-07 1.9E-11 84.1 22.3 95 322-424 162-259 (286)
43 3dsm_A Uncharacterized protein 98.8 4.3E-07 1.5E-11 87.4 21.9 101 2-107 57-162 (328)
44 2z2n_A Virginiamycin B lyase; 98.8 1.9E-06 6.4E-11 80.3 25.4 100 2-106 29-129 (299)
45 2fp8_A Strictosidine synthase; 98.8 7.2E-07 2.5E-11 85.4 22.5 86 320-407 181-276 (322)
46 1tpg_A T-plasminogen activator 98.8 5.3E-09 1.8E-13 81.4 5.5 62 148-222 25-88 (91)
47 4d90_A EGF-like repeat and dis 98.8 4.1E-09 1.4E-13 89.3 5.3 79 137-222 1-97 (143)
48 1q7f_A NHL, brain tumor CG1071 98.8 2.7E-06 9.1E-11 79.3 24.5 103 1-107 43-152 (286)
49 3g4e_A Regucalcin; six bladed 98.8 2E-06 6.8E-11 81.3 23.4 98 320-423 145-248 (297)
50 1nfu_B Coagulation factor XA, 98.7 1.7E-09 5.7E-14 96.1 1.5 76 135-222 41-123 (195)
51 1x7a_L Coagulation factor IX, 98.7 3.6E-09 1.2E-13 90.0 3.2 75 135-222 47-128 (146)
52 2c4f_L Coagulation factor VII 98.7 3E-09 1E-13 90.1 2.7 79 134-223 45-132 (142)
53 2qc5_A Streptogramin B lactona 98.7 5.1E-06 1.8E-10 77.3 23.7 101 1-106 75-176 (300)
54 1aut_L Activated protein C; se 98.7 1.6E-08 5.5E-13 82.2 4.8 76 136-221 6-95 (114)
55 2vh0_B Activated factor XA lig 98.7 5.5E-09 1.9E-13 87.6 2.0 76 135-222 41-123 (134)
56 2w2n_E LDL receptor, low-densi 98.6 4.4E-09 1.5E-13 84.5 1.0 71 135-216 28-100 (107)
57 2wg3_C Hedgehog-interacting pr 98.6 5.6E-08 1.9E-12 98.3 9.1 157 31-223 276-458 (463)
58 3dr2_A Exported gluconolactona 98.6 9.1E-06 3.1E-10 76.9 23.8 82 19-106 34-116 (305)
59 1z6c_A Vitamin K-dependent pro 98.6 2E-08 7E-13 77.4 4.2 75 135-221 2-79 (87)
60 3u7u_G Neuregulin 1; signaling 98.6 2.9E-08 9.8E-13 69.0 3.7 47 173-223 2-52 (55)
61 3e5z_A Putative gluconolactona 98.6 3.1E-05 1.1E-09 72.5 26.0 82 18-105 16-98 (296)
62 2z2n_A Virginiamycin B lyase; 98.6 1.7E-05 5.7E-10 73.7 23.7 99 2-105 71-170 (299)
63 2bou_A EGF-like module contain 98.5 2.6E-08 8.7E-13 84.4 2.9 81 135-220 43-134 (143)
64 2fp8_A Strictosidine synthase; 98.5 2.9E-05 1E-09 74.0 23.6 93 1-96 32-147 (322)
65 1yo8_A Thrombospondin-2; EGF, 98.5 7.5E-08 2.6E-12 99.9 5.5 76 135-219 2-85 (634)
66 3h5c_B Vitamin K-dependent pro 98.5 1.2E-07 4.2E-12 91.1 6.7 70 135-216 4-76 (317)
67 3ca7_A Protein spitz; argos, E 98.4 2E-08 6.9E-13 69.3 -0.4 32 190-221 15-49 (52)
68 1z1y_A Ookinete surface protei 98.4 5.9E-08 2E-12 85.9 1.9 74 140-218 9-87 (186)
69 1dx5_I Thrombomodulin; serine 98.4 4.9E-08 1.7E-12 79.8 1.0 72 135-219 3-78 (118)
70 2ism_A Putative oxidoreductase 98.4 3.3E-05 1.1E-09 75.2 20.6 79 23-106 23-114 (352)
71 3a9g_A Putative uncharacterize 98.4 8.8E-05 3E-09 72.2 23.3 80 23-107 21-115 (354)
72 1yo8_A Thrombospondin-2; EGF, 98.4 2.6E-07 8.8E-12 95.9 5.2 85 131-220 40-146 (634)
73 1uzk_A Fibrillin-1; glycoprote 98.3 4.3E-08 1.5E-12 84.9 -1.1 83 135-220 2-91 (162)
74 1z1y_A Ookinete surface protei 98.3 1E-07 3.4E-12 84.5 1.2 81 136-224 91-179 (186)
75 2w86_A Fibrillin-1, fibrillin1 98.3 1.5E-07 5.2E-12 80.0 1.9 29 135-163 3-32 (147)
76 2vj2_A Jagged-1; signalling, p 98.3 2.6E-07 8.9E-12 80.5 3.2 69 139-220 99-169 (169)
77 1dx5_I Thrombomodulin; serine 98.3 1.7E-07 5.8E-12 76.6 1.6 67 138-216 45-111 (118)
78 1pjx_A Dfpase, DIISOPROPYLFLUO 98.2 0.00014 4.7E-09 68.2 21.1 97 321-423 169-275 (314)
79 1edm_B Factor IX; epidermal gr 98.2 9.8E-07 3.3E-11 56.8 3.8 30 190-220 10-39 (39)
80 3vgz_A Uncharacterized protein 98.2 0.0024 8.1E-08 60.4 29.4 91 325-424 232-322 (353)
81 2dg1_A DRP35, lactonase; beta 98.2 0.00049 1.7E-08 65.1 24.1 82 323-406 181-269 (333)
82 3dsm_A Uncharacterized protein 98.1 0.00042 1.4E-08 66.2 22.5 69 32-107 45-115 (328)
83 2qe8_A Uncharacterized protein 98.1 0.00025 8.6E-09 68.2 20.8 95 325-424 196-299 (343)
84 2ghs_A AGR_C_1268P; regucalcin 98.1 0.0007 2.4E-08 64.6 23.0 94 323-423 178-278 (326)
85 1a3p_A Epidermal growth factor 98.1 1.7E-06 5.9E-11 57.6 3.2 33 190-222 10-43 (45)
86 1egf_A Epidermal growth factor 98.1 2.7E-06 9.1E-11 58.8 4.2 34 190-223 13-47 (53)
87 4fbr_A Lectin, myxobacterial h 98.0 7.9E-08 2.7E-12 88.8 -6.3 80 136-223 99-205 (267)
88 2ism_A Putative oxidoreductase 98.0 0.00076 2.6E-08 65.4 21.7 101 1-106 44-178 (352)
89 2bou_A EGF-like module contain 98.0 2.7E-06 9.1E-11 71.8 3.5 65 147-219 14-82 (143)
90 1nql_B Epidermal growth factor 98.0 2.4E-06 8.2E-11 58.9 2.5 35 190-224 13-48 (53)
91 3u4y_A Uncharacterized protein 98.0 0.0048 1.6E-07 57.9 26.1 79 322-403 174-255 (331)
92 3a9g_A Putative uncharacterize 98.0 0.0018 6.3E-08 62.8 23.3 122 1-127 42-206 (354)
93 1hae_A Heregulin-alpha; growth 97.9 6E-06 2E-10 59.2 3.7 35 190-224 13-51 (63)
94 3ltf_D Protein spitz; receptor 97.9 3.9E-06 1.3E-10 59.0 2.4 36 190-225 15-53 (58)
95 3g4e_A Regucalcin; six bladed 97.9 4.8E-05 1.6E-09 71.7 10.6 114 10-126 130-249 (297)
96 1k36_A Epiregulin; EGF-like fo 97.9 6E-06 2.1E-10 55.1 2.8 32 190-222 13-45 (46)
97 2iwa_A Glutamine cyclotransfer 97.9 0.011 3.7E-07 54.9 25.5 72 31-106 21-95 (266)
98 2jkh_L Factor X light chain; p 97.8 5E-06 1.7E-10 57.9 1.7 41 137-180 2-44 (55)
99 2g8s_A Glucose/sorbosone dehyd 97.8 0.0011 3.7E-08 64.4 18.7 85 18-105 6-106 (353)
100 2wg3_C Hedgehog-interacting pr 97.8 9.1E-05 3.1E-09 74.7 10.6 194 9-225 176-428 (463)
101 1ri6_A Putative isomerase YBHE 97.8 0.026 8.8E-07 52.6 27.8 75 324-399 178-261 (343)
102 1kli_L Factor VIIA; extrinsic 97.8 8.8E-06 3E-10 59.3 2.1 43 135-180 4-49 (69)
103 4fbr_A Lectin, myxobacterial h 97.8 5.2E-07 1.8E-11 83.3 -5.6 73 143-223 39-138 (267)
104 2k2s_B Micronemal protein 6; m 97.7 1.7E-05 5.7E-10 56.2 3.0 31 190-221 18-51 (61)
105 2dg1_A DRP35, lactonase; beta 97.7 0.019 6.6E-07 53.9 25.3 103 1-106 58-171 (333)
106 3u4y_A Uncharacterized protein 97.7 0.021 7E-07 53.4 25.3 80 322-403 126-210 (331)
107 3vgz_A Uncharacterized protein 97.7 0.035 1.2E-06 52.1 26.9 62 325-389 273-334 (353)
108 3e5z_A Putative gluconolactona 97.7 0.00026 8.8E-09 66.1 11.6 102 317-424 21-123 (296)
109 1kig_L Factor XA; glycoprotein 97.7 1.7E-05 5.8E-10 54.2 2.3 36 142-180 6-41 (51)
110 3das_A Putative oxidoreductase 97.6 0.025 8.6E-07 54.5 25.0 80 25-106 26-116 (347)
111 1apq_A Complement protease C1R 97.6 2.7E-05 9.3E-10 53.5 2.7 39 135-176 3-51 (53)
112 1edm_B Factor IX; epidermal gr 97.6 3.3E-05 1.1E-09 49.4 2.9 35 135-176 2-38 (39)
113 3dr2_A Exported gluconolactona 97.6 0.00061 2.1E-08 64.2 12.3 104 315-424 36-139 (305)
114 2wph_E Coagulation factor IXA 97.5 4.1E-05 1.4E-09 54.0 2.4 35 142-179 7-42 (59)
115 2gy5_A Angiopoietin-1 receptor 97.5 8.7E-05 3E-09 73.9 5.5 60 152-223 260-323 (423)
116 3fcs_B Integrin beta-3; beta p 97.5 3.9E-05 1.3E-09 80.6 3.1 72 138-221 436-524 (690)
117 2ygq_A WIF-1, WNT inhibitory f 97.5 8.7E-05 3E-09 71.3 5.1 51 154-222 164-214 (324)
118 3u7u_G Neuregulin 1; signaling 97.4 4.5E-05 1.6E-09 52.7 2.0 38 135-179 7-51 (55)
119 2bz6_L Blood coagulation facto 97.4 3.7E-05 1.3E-09 52.9 1.3 36 142-180 7-43 (53)
120 1cru_A Protein (soluble quinop 97.4 0.0078 2.7E-07 60.4 19.0 74 19-95 16-100 (454)
121 3hfq_A Uncharacterized protein 97.4 0.087 3E-06 49.6 26.9 75 324-400 240-317 (347)
122 2fd6_A Urokinase-type plasmino 97.4 9.7E-05 3.3E-09 60.3 3.5 35 189-223 1-37 (122)
123 1ri6_A Putative isomerase YBHE 97.3 0.096 3.3E-06 48.6 27.9 98 323-424 230-331 (343)
124 3scy_A Hypothetical bacterial 97.3 0.12 4E-06 49.1 26.7 76 321-399 208-290 (361)
125 1l0q_A Surface layer protein; 97.3 0.13 4.3E-06 49.2 29.6 80 323-405 199-280 (391)
126 3sre_A PON1, serum paraoxonase 97.3 0.017 5.9E-07 55.8 19.1 68 319-387 216-284 (355)
127 2p4o_A Hypothetical protein; p 97.2 0.0078 2.7E-07 56.6 15.8 103 1-106 85-198 (306)
128 3hfq_A Uncharacterized protein 97.2 0.14 4.8E-06 48.1 26.3 99 324-424 187-294 (347)
129 3nok_A Glutaminyl cyclase; bet 97.2 0.093 3.2E-06 48.4 22.1 67 34-106 58-125 (268)
130 1iox_A Betacellulin; EGF-like 97.2 0.00021 7.2E-09 48.3 2.9 32 190-222 15-47 (50)
131 3qqz_A Putative uncharacterize 97.1 0.13 4.3E-06 47.3 22.4 98 326-425 123-233 (255)
132 2gy5_A Angiopoietin-1 receptor 97.1 0.0002 6.8E-09 71.3 3.5 65 143-220 204-278 (423)
133 2p9w_A MAL S 1 allergenic prot 97.1 0.099 3.4E-06 49.8 21.9 96 324-424 185-287 (334)
134 1egf_A Epidermal growth factor 97.1 0.0003 1E-08 48.3 3.0 37 136-179 3-46 (53)
135 2ygq_A WIF-1, WNT inhibitory f 97.1 0.00033 1.1E-08 67.2 4.4 50 154-221 196-245 (324)
136 3e50_C Protransforming growth 97.1 0.00032 1.1E-08 47.3 3.0 31 190-221 15-46 (50)
137 2i9a_A Urokinase-type plasmino 97.1 0.00035 1.2E-08 58.7 3.8 37 187-223 11-49 (145)
138 2k2s_B Micronemal protein 6; m 97.1 5.6E-05 1.9E-09 53.5 -0.9 37 135-178 10-51 (61)
139 2rnl_A Amphiregulin; AR, color 97.0 0.00049 1.7E-08 46.4 3.6 30 190-220 19-49 (50)
140 3fcs_B Integrin beta-3; beta p 97.0 0.00039 1.3E-08 73.1 4.8 61 143-220 535-600 (690)
141 1k36_A Epiregulin; EGF-like fo 97.0 0.00021 7.1E-09 47.5 1.7 35 136-177 3-43 (46)
142 3nol_A Glutamine cyclotransfer 97.0 0.2 6.7E-06 46.1 24.0 70 34-107 46-117 (262)
143 1l0q_A Surface layer protein; 97.0 0.24 8.4E-06 47.1 28.7 82 323-407 157-240 (391)
144 1a3p_A Epidermal growth factor 97.0 0.00029 9.8E-09 46.6 2.1 35 137-178 1-42 (45)
145 1x7a_L Coagulation factor IX, 97.0 0.00052 1.8E-08 57.9 3.9 43 173-221 43-85 (146)
146 1pjx_A Dfpase, DIISOPROPYLFLUO 97.0 0.0034 1.2E-07 58.4 10.1 104 315-424 9-125 (314)
147 2ygo_A WIF-1, WNT inhibitory f 96.9 0.00039 1.3E-08 60.2 2.8 29 190-222 154-182 (188)
148 3nt1_A Prostaglandin-endoperox 96.9 0.00033 1.1E-08 72.1 2.7 33 190-222 8-41 (587)
149 1q4g_A Prostaglandin G/H synth 96.9 0.0004 1.4E-08 71.3 2.8 33 190-223 9-43 (553)
150 1uzk_A Fibrillin-1; glycoprote 96.7 0.00024 8.2E-09 61.0 -0.1 57 153-217 98-156 (162)
151 2ghs_A AGR_C_1268P; regucalcin 96.7 0.023 8E-07 53.8 13.7 94 10-107 161-261 (326)
152 1aut_L Activated protein C; se 96.6 0.00077 2.6E-08 54.2 2.5 55 136-201 54-110 (114)
153 2qe8_A Uncharacterized protein 96.6 0.015 5E-07 55.6 11.7 63 325-393 249-314 (343)
154 2g8s_A Glucose/sorbosone dehyd 96.6 0.0053 1.8E-07 59.4 8.4 124 1-127 32-206 (353)
155 1hae_A Heregulin-alpha; growth 96.5 0.00034 1.1E-08 49.9 -0.3 36 137-179 7-49 (63)
156 3zyj_B Netrin-G1; cell adhesio 96.5 0.001 3.5E-08 65.5 2.8 31 190-224 372-402 (426)
157 2c4f_L Coagulation factor VII 96.5 0.0012 4.2E-08 55.2 3.0 31 190-221 54-84 (142)
158 1nfu_B Coagulation factor XA, 96.5 0.00042 1.4E-08 61.3 0.0 43 173-221 37-79 (195)
159 1xdt_R Hbegf, heparin-binding 96.5 0.00059 2E-08 50.4 0.8 30 190-220 47-77 (79)
160 1g1s_A P-selectin; selectin, l 96.5 0.00074 2.5E-08 57.7 1.4 32 190-222 126-157 (162)
161 4aqs_A Laminin subunit beta-1; 96.4 0.0011 3.8E-08 67.9 2.6 60 154-220 459-525 (525)
162 2vj2_A Jagged-1; signalling, p 96.4 0.00069 2.4E-08 58.6 0.5 49 154-221 82-130 (169)
163 3mbr_X Glutamine cyclotransfer 96.3 0.65 2.2E-05 42.1 23.2 74 29-106 19-94 (243)
164 1emn_A Fibrillin; extracellula 96.2 0.0021 7.2E-08 48.3 2.6 29 190-220 13-43 (82)
165 2fd6_A Urokinase-type plasmino 96.2 0.0019 6.5E-08 52.5 2.1 60 143-223 2-66 (122)
166 3bws_A Protein LP49; two-domai 96.1 1 3.5E-05 43.4 26.4 76 322-400 343-432 (433)
167 3das_A Putative oxidoreductase 96.1 0.031 1.1E-06 53.8 10.9 116 9-128 173-318 (347)
168 2vh0_B Activated factor XA lig 96.1 0.00091 3.1E-08 55.4 0.0 31 190-221 49-79 (134)
169 3h5c_B Vitamin K-dependent pro 95.9 0.0031 1.1E-07 60.1 2.6 31 190-221 12-42 (317)
170 3f1s_B Vitamin K-dependent pro 95.9 0.004 1.4E-07 58.3 3.2 41 136-179 2-45 (283)
171 3k6s_B Integrin beta-2; cell r 95.8 0.0046 1.6E-07 64.8 3.7 52 156-220 539-592 (687)
172 1tpg_A T-plasminogen activator 95.8 0.0033 1.1E-07 48.3 1.9 36 135-177 47-86 (91)
173 2p28_B Integrin beta-2; hybrid 95.7 0.0031 1.1E-07 56.7 1.5 68 142-221 143-215 (217)
174 1szb_A Mannose binding lectin- 95.7 0.0037 1.3E-07 53.8 1.9 40 135-177 123-167 (170)
175 3k6s_B Integrin beta-2; cell r 95.6 0.0043 1.5E-07 65.0 2.5 54 155-220 446-514 (687)
176 3sre_A PON1, serum paraoxonase 95.5 0.03 1E-06 54.1 8.0 93 322-425 163-275 (355)
177 1cru_A Protein (soluble quinop 95.5 0.07 2.4E-06 53.4 10.9 102 319-424 22-152 (454)
178 2p28_B Integrin beta-2; hybrid 95.4 0.0046 1.6E-07 55.5 1.6 55 155-221 107-176 (217)
179 3asi_A Neurexin-1-alpha; beta- 95.3 0.012 4E-07 58.2 4.5 32 190-222 192-224 (410)
180 1z6c_A Vitamin K-dependent pro 95.3 0.0051 1.8E-07 46.7 1.4 29 135-163 44-74 (87)
181 1n1i_A Merozoite surface prote 95.3 0.016 5.5E-07 44.8 4.1 78 137-221 11-96 (105)
182 2w2n_E LDL receptor, low-densi 95.2 0.0036 1.2E-07 49.6 0.2 29 135-163 68-97 (107)
183 2p9w_A MAL S 1 allergenic prot 95.2 0.26 9E-06 46.9 13.0 106 1-109 27-171 (334)
184 1lmj_A Fibrillin 1; EGF, calci 95.1 0.0042 1.4E-07 47.0 0.4 33 135-168 45-80 (86)
185 1g1s_A P-selectin; selectin, l 95.1 0.0054 1.8E-07 52.2 1.0 38 136-180 119-158 (162)
186 1g1t_A E-selectin; EGF, adhesi 95.0 0.0057 2E-07 51.7 0.9 31 190-221 126-156 (157)
187 1klo_A Laminin; glycoprotein; 95.0 0.015 5E-07 49.7 3.4 32 189-220 1-34 (162)
188 2iwa_A Glutamine cyclotransfer 94.9 0.31 1E-05 45.0 12.5 107 1-113 78-188 (266)
189 1nql_B Epidermal growth factor 94.9 0.0069 2.3E-07 41.3 0.9 31 141-178 11-45 (53)
190 3cfw_A L-selectin; EGF, cell a 94.7 0.015 5E-07 49.6 2.8 32 190-222 126-157 (164)
191 3scy_A Hypothetical bacterial 94.7 2.9 9.8E-05 39.2 28.3 77 323-400 258-337 (361)
192 1nzi_A Complement C1S componen 94.5 0.016 5.4E-07 49.1 2.4 39 135-176 116-157 (159)
193 1klo_A Laminin; glycoprotein; 94.5 0.011 3.6E-07 50.6 1.3 64 147-220 8-91 (162)
194 1q4g_A Prostaglandin G/H synth 94.4 0.0092 3.1E-07 61.2 0.8 36 136-178 2-41 (553)
195 2kl7_A Fibulin-4; secreted, ca 94.3 0.019 6.6E-07 41.7 2.2 29 135-163 2-35 (71)
196 1pby_B Quinohemoprotein amine 94.2 0.85 2.9E-05 41.9 14.2 101 304-407 11-131 (337)
197 3bws_A Protein LP49; two-domai 94.2 4 0.00014 39.0 26.1 81 324-407 303-397 (433)
198 3nt1_A Prostaglandin-endoperox 93.9 0.017 5.8E-07 59.4 1.7 36 136-178 1-40 (587)
199 1gl4_A Nidogen-1, entactin; im 93.9 0.0066 2.3E-07 56.3 -1.3 41 135-180 4-48 (285)
200 3qqz_A Putative uncharacterize 93.8 0.58 2E-05 42.8 11.7 75 324-402 27-102 (255)
201 4aqs_A Laminin subunit beta-1; 93.7 0.022 7.5E-07 58.2 2.1 34 187-220 439-475 (525)
202 3qcw_A Neurexin-1-alpha; synap 93.7 0.046 1.6E-06 61.7 4.8 33 190-223 1024-1057(1245)
203 2w86_A Fibrillin-1, fibrillin1 93.6 0.015 5E-07 48.7 0.4 32 135-167 106-140 (147)
204 1apq_A Complement protease C1R 93.5 0.044 1.5E-06 37.0 2.6 23 190-215 21-43 (53)
205 1ob1_C Major merozoite surface 93.2 0.068 2.3E-06 41.0 3.5 77 137-220 5-94 (99)
206 3nok_A Glutaminyl cyclase; bet 93.1 1.9 6.5E-05 39.6 13.8 91 7-106 72-164 (268)
207 2i9a_A Urokinase-type plasmino 93.0 0.055 1.9E-06 45.2 3.0 60 143-223 14-78 (145)
208 1jmx_B Amine dehydrogenase; ox 92.9 1.8 6.2E-05 39.9 13.9 96 302-400 19-134 (349)
209 1gl4_A Nidogen-1, entactin; im 92.8 0.039 1.3E-06 51.2 1.9 30 190-220 14-45 (285)
210 3mbr_X Glutamine cyclotransfer 92.5 3.1 0.0001 37.6 14.2 89 10-106 43-133 (243)
211 1xdt_R Hbegf, heparin-binding 92.2 0.045 1.6E-06 40.3 1.3 35 135-176 36-76 (79)
212 3ca7_A Protein spitz; argos, E 91.8 0.034 1.2E-06 37.6 0.2 28 143-177 15-48 (52)
213 1jof_A Carboxy-CIS,CIS-muconat 91.8 1.1 3.7E-05 42.5 11.1 112 286-399 42-175 (365)
214 3c75_H MADH, methylamine dehyd 91.4 1.2 4.2E-05 43.9 11.1 96 304-402 99-211 (426)
215 2jkh_L Factor X light chain; p 91.1 0.099 3.4E-06 35.7 2.0 26 195-221 13-42 (55)
216 2y38_A Laminin subunit alpha-5 90.8 0.21 7.1E-06 48.8 4.8 38 185-222 321-375 (403)
217 2mad_H Methylamine dehydrogena 90.8 4.7 0.00016 38.7 14.5 92 32-126 265-370 (373)
218 2rnl_A Amphiregulin; AR, color 90.7 0.15 5.2E-06 34.0 2.6 35 135-176 8-48 (50)
219 3ltf_D Protein spitz; receptor 90.3 0.035 1.2E-06 38.5 -0.9 29 143-178 15-49 (58)
220 3qcw_A Neurexin-1-alpha; synap 90.1 0.18 6.2E-06 56.9 4.2 31 190-221 626-657 (1245)
221 2ece_A 462AA long hypothetical 90.1 5.6 0.00019 39.4 14.3 96 304-399 228-351 (462)
222 2hqs_A Protein TOLB; TOLB, PAL 90.0 14 0.00048 35.5 26.7 80 324-407 311-394 (415)
223 2wph_E Coagulation factor IXA 90.0 0.13 4.5E-06 35.7 1.9 27 195-221 11-41 (59)
224 3nol_A Glutamine cyclotransfer 89.9 4.6 0.00016 36.9 12.7 88 11-106 66-155 (262)
225 1jof_A Carboxy-CIS,CIS-muconat 89.8 2.3 7.9E-05 40.2 11.3 75 323-399 144-223 (365)
226 3cfw_A L-selectin; EGF, cell a 89.8 0.14 4.9E-06 43.2 2.4 37 137-180 120-158 (164)
227 3q6k_A 43.2 kDa salivary prote 89.5 3.9 0.00013 39.6 12.5 97 324-423 220-331 (381)
228 3e50_C Protransforming growth 89.4 0.17 6E-06 33.7 2.0 30 142-178 14-46 (50)
229 2kl7_A Fibulin-4; secreted, ca 89.2 0.16 5.6E-06 36.6 1.9 18 190-208 12-29 (71)
230 2bz6_L Blood coagulation facto 89.1 0.18 6.1E-06 34.1 2.0 27 195-221 11-41 (53)
231 3asi_A Neurexin-1-alpha; beta- 88.7 0.16 5.4E-06 50.0 2.1 36 135-177 184-222 (410)
232 1kig_L Factor XA; glycoprotein 88.7 0.16 5.4E-06 34.1 1.4 26 195-221 10-39 (51)
233 1iox_A Betacellulin; EGF-like 88.5 0.22 7.6E-06 33.2 2.0 30 142-178 14-46 (50)
234 1kli_L Factor VIIA; extrinsic 88.1 0.2 6.9E-06 36.0 1.7 27 195-221 17-47 (69)
235 3amr_A 3-phytase; beta-propell 87.9 2.5 8.7E-05 40.4 9.8 78 324-402 180-265 (355)
236 1szb_A Mannose binding lectin- 86.6 0.45 1.6E-05 40.4 3.5 27 191-220 137-167 (170)
237 3zyj_B Netrin-G1; cell adhesio 86.6 0.13 4.5E-06 50.5 0.0 34 147-201 378-411 (426)
238 3c75_H MADH, methylamine dehyd 86.5 4.5 0.00015 39.8 11.1 103 2-107 88-210 (426)
239 1g1t_A E-selectin; EGF, adhesi 86.3 0.16 5.5E-06 42.4 0.5 35 136-177 119-155 (157)
240 4aqt_A Laminin subunit gamma-1 85.7 0.38 1.3E-05 46.6 2.8 62 153-221 270-351 (375)
241 1nzi_A Complement C1S componen 85.6 0.6 2E-05 39.0 3.7 25 195-220 130-158 (159)
242 3q6k_A 43.2 kDa salivary prote 85.4 15 0.0005 35.5 13.8 92 1-95 238-343 (381)
243 3amr_A 3-phytase; beta-propell 85.1 8.9 0.0003 36.6 12.0 77 321-399 125-209 (355)
244 1nir_A Nitrite reductase; hemo 84.4 12 0.0004 37.9 13.4 96 303-400 158-257 (543)
245 1jmx_B Amine dehydrogenase; ox 83.6 25 0.00087 31.8 27.1 73 324-403 255-328 (349)
246 3no2_A Uncharacterized protein 83.5 11 0.00038 34.1 11.8 100 3-108 92-198 (276)
247 1nir_A Nitrite reductase; hemo 83.2 40 0.0014 33.8 27.4 75 323-400 323-402 (543)
248 2mad_H Methylamine dehydrogena 83.0 12 0.0004 35.8 12.2 93 305-401 48-157 (373)
249 2l2t_A Receptor tyrosine-prote 82.2 1.5 5E-05 28.3 3.5 11 249-259 28-38 (44)
250 2ks1_B Epidermal growth factor 81.8 1.6 5.3E-05 28.2 3.5 11 249-259 29-39 (44)
251 3sjl_D Methylamine dehydrogena 81.7 12 0.00042 36.1 11.7 96 304-403 59-172 (386)
252 2ygo_A WIF-1, WNT inhibitory f 80.5 0.86 2.9E-05 39.3 2.6 16 155-177 165-180 (188)
253 1fwx_A Nitrous oxide reductase 80.5 8.3 0.00028 39.5 10.3 95 294-390 100-216 (595)
254 4a9v_A PHOX; hydrolase, beta-p 80.4 8.6 0.00029 39.2 10.3 68 321-389 381-496 (592)
255 1qks_A Cytochrome CD1 nitrite 80.4 30 0.001 35.1 14.8 96 2-105 170-274 (567)
256 2hqs_A Protein TOLB; TOLB, PAL 80.4 12 0.00042 36.0 11.4 100 304-406 247-350 (415)
257 2oiz_A Aromatic amine dehydrog 80.0 9.8 0.00034 35.9 10.4 93 306-401 33-141 (361)
258 3no2_A Uncharacterized protein 79.6 27 0.00092 31.5 12.9 100 3-107 140-254 (276)
259 2ece_A 462AA long hypothetical 79.6 4.6 0.00016 40.0 7.9 62 324-387 321-399 (462)
260 1qks_A Cytochrome CD1 nitrite 79.5 26 0.0009 35.6 14.0 95 301-398 174-273 (567)
261 3sjl_D Methylamine dehydrogena 78.4 16 0.00053 35.4 11.2 110 10-125 247-381 (386)
262 2oiz_A Aromatic amine dehydrog 77.6 47 0.0016 31.1 14.6 88 33-125 253-355 (361)
263 2jwa_A Receptor tyrosine-prote 76.7 2.3 7.7E-05 27.4 3.0 14 246-259 27-40 (44)
264 2ojh_A Uncharacterized protein 76.7 37 0.0013 29.4 23.5 82 323-407 172-265 (297)
265 1pby_B Quinohemoprotein amine 75.6 44 0.0015 29.8 32.3 78 323-407 240-317 (337)
266 2e26_A Reelin, reeler protein; 75.3 0.61 2.1E-05 48.6 0.1 49 157-223 520-568 (725)
267 2ojh_A Uncharacterized protein 74.2 36 0.0012 29.5 12.0 80 324-406 129-212 (297)
268 1mda_H Methylamine dehydrogena 73.3 13 0.00045 35.5 9.2 91 32-127 262-366 (368)
269 2k1k_A Ephrin type-A receptor 66.8 7.6 0.00026 24.1 3.8 12 247-258 27-38 (38)
270 1mda_H Methylamine dehydrogena 66.7 25 0.00086 33.5 9.5 88 305-395 47-151 (368)
271 3azo_A Aminopeptidase; POP fam 66.3 27 0.00091 35.5 10.3 100 305-407 162-281 (662)
272 1b9w_A Protein (merozoite surf 64.1 5.6 0.00019 29.9 3.2 71 138-219 6-89 (95)
273 3t5o_A Complement component C6 64.0 3.7 0.00013 44.7 3.2 32 190-222 504-535 (913)
274 4a5s_A Dipeptidyl peptidase 4 61.6 33 0.0011 35.7 10.1 75 33-110 321-404 (740)
275 3azo_A Aminopeptidase; POP fam 60.4 14 0.0005 37.6 6.9 95 10-106 102-226 (662)
276 3dem_A Complement factor MAsp- 59.4 4.4 0.00015 37.1 2.5 25 143-168 133-157 (278)
277 3o4h_A Acylamino-acid-releasin 59.4 41 0.0014 33.5 10.1 95 308-408 48-149 (582)
278 3pe7_A Oligogalacturonate lyas 58.8 51 0.0017 30.4 10.1 97 10-108 168-275 (388)
279 3fby_A COMP, cartilage oligome 57.9 5 0.00017 40.3 2.6 30 190-219 28-59 (551)
280 4aqt_A Laminin subunit gamma-1 57.6 5.4 0.00019 38.5 2.8 35 189-223 255-290 (375)
281 3pe7_A Oligogalacturonate lyas 56.8 46 0.0016 30.7 9.4 96 309-407 173-280 (388)
282 2gop_A Trilobed protease; beta 55.9 61 0.0021 29.3 10.0 76 10-93 43-122 (347)
283 1fwx_A Nitrous oxide reductase 54.3 74 0.0025 32.5 10.7 94 1-98 104-218 (595)
284 3c5m_A Oligogalacturonate lyas 51.9 58 0.002 29.9 9.2 74 33-108 38-113 (396)
285 2ecf_A Dipeptidyl peptidase IV 51.1 84 0.0029 32.2 11.1 88 295-387 120-227 (741)
286 3fl7_A Ephrin receptor; ATP-bi 50.7 5.9 0.0002 40.2 1.9 54 155-215 263-320 (536)
287 1nt0_A MAsp2, mannose-binding 49.9 4.5 0.00015 37.2 0.8 25 143-168 132-156 (286)
288 2k9y_A Ephrin type-A receptor 48.2 18 0.00062 22.4 3.3 6 252-257 34-39 (41)
289 2gop_A Trilobed protease; beta 48.0 1.2E+02 0.004 27.3 10.5 80 324-407 59-169 (347)
290 2z3z_A Dipeptidyl aminopeptida 47.2 1.2E+02 0.0041 30.8 11.4 94 11-108 336-437 (706)
291 2p26_A Integrin beta-2; hybrid 47.1 6.7 0.00023 36.2 1.5 53 156-220 208-275 (280)
292 1iij_A ERBB-2 receptor protein 45.4 6.8 0.00023 23.8 0.8 6 253-258 29-34 (35)
293 3o4h_A Acylamino-acid-releasin 43.3 48 0.0016 33.0 7.4 92 304-401 175-276 (582)
294 3iuj_A Prolyl endopeptidase; h 40.5 1.5E+02 0.0051 30.4 10.9 87 317-408 321-413 (693)
295 3c5m_A Oligogalacturonate lyas 40.1 1.2E+02 0.004 27.7 9.3 95 10-107 168-274 (396)
296 1ob1_C Major merozoite surface 38.8 12 0.0004 28.6 1.4 32 190-221 11-44 (99)
297 2ecf_A Dipeptidyl peptidase IV 38.4 1.1E+02 0.0038 31.3 9.5 78 326-407 111-188 (741)
298 2z3z_A Dipeptidyl aminopeptida 38.3 2.3E+02 0.0077 28.7 11.9 79 326-407 183-301 (706)
299 4a9v_A PHOX; hydrolase, beta-p 37.0 88 0.003 31.9 7.9 64 321-388 473-550 (592)
300 3v4v_B Integrin beta-7; cell a 36.7 7.3 0.00025 38.9 0.0 29 195-224 467-498 (503)
301 4a5s_A Dipeptidyl peptidase 4 36.1 82 0.0028 32.6 8.1 77 326-407 321-407 (740)
302 3iuj_A Prolyl endopeptidase; h 35.7 2.1E+02 0.007 29.3 11.0 74 331-406 287-365 (693)
303 1rju_V Metallothionein; Cu(I)- 34.3 4.3 0.00015 23.5 -1.2 9 206-214 19-27 (36)
304 1k32_A Tricorn protease; prote 33.1 3.6E+02 0.012 29.0 12.9 93 11-106 359-461 (1045)
305 1xfd_A DIP, dipeptidyl aminope 32.8 1.7E+02 0.0059 29.6 9.9 96 11-107 281-396 (723)
306 3f1s_B Vitamin K-dependent pro 31.8 15 0.00052 33.4 1.3 24 196-220 16-43 (283)
307 1n1i_A Merozoite surface prote 30.6 26 0.00089 26.9 2.2 31 191-221 18-50 (105)
308 1yr2_A Prolyl oligopeptidase; 30.5 3.2E+02 0.011 28.0 11.6 98 305-406 295-401 (741)
309 3nsj_A Perforin-1; pore formin 29.6 19 0.00064 36.5 1.6 33 190-224 359-393 (540)
310 2y38_A Laminin subunit alpha-5 29.3 28 0.00097 33.7 2.8 35 188-222 265-303 (403)
311 1k32_A Tricorn protease; prote 28.7 2.9E+02 0.01 29.7 11.2 107 297-407 26-150 (1045)
312 2l6w_A Beta-type platelet-deri 33.1 13 0.00045 22.9 0.0 11 249-259 26-36 (39)
313 3ojy_B Complement component C8 27.0 32 0.0011 34.8 2.8 32 190-222 453-484 (537)
314 3zwu_A Alkaline phosphatase PH 26.0 4.4E+02 0.015 26.7 11.1 69 321-389 381-496 (592)
315 4f87_A Plycb; lysin, bacteriop 25.8 33 0.0011 22.9 1.8 32 333-369 13-44 (72)
316 2pe4_A Hyaluronidase-1; hyalur 25.6 27 0.00091 33.9 1.8 20 204-223 396-415 (424)
317 1aqs_A Cu-MT, Cu-metallothione 25.3 17 0.00057 22.9 0.2 9 206-214 23-31 (53)
318 4deq_A Neuropilin-1, vascular 25.1 5.6 0.00019 35.3 -2.9 32 190-222 172-203 (218)
319 2lk9_A Bone marrow stromal ant 25.0 54 0.0018 19.5 2.3 10 235-244 7-16 (35)
320 2xdw_A Prolyl endopeptidase; a 24.0 5.7E+02 0.02 25.8 12.0 76 330-406 292-375 (710)
321 2e26_A Reelin, reeler protein; 23.8 19 0.00066 37.5 0.5 28 190-221 191-218 (725)
322 2ddu_A Reelin; beta-jelly-roll 23.4 15 0.00053 35.2 -0.3 29 190-223 197-227 (387)
323 2l9u_A Receptor tyrosine-prote 22.3 36 0.0012 20.3 1.3 14 246-259 21-34 (40)
324 1yr2_A Prolyl oligopeptidase; 21.4 3.1E+02 0.011 28.1 9.4 96 9-107 340-442 (741)
325 1xfd_A DIP, dipeptidyl aminope 20.9 6.3E+02 0.022 25.2 12.1 100 305-409 38-152 (723)
326 2bkl_A Prolyl endopeptidase; m 20.6 4.7E+02 0.016 26.4 10.5 98 305-406 253-357 (695)
327 3t3p_B Integrin beta-3; integr 20.2 27 0.00094 34.5 0.7 14 206-219 459-472 (472)
No 1
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=9.6e-49 Score=412.79 Aligned_cols=296 Identities=32% Similarity=0.585 Sum_probs=248.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
||||||++.++|+|++|||+.+++++.+.+.+|+|||+|+.++ +|||+|.+.++|+++++||+++++++.+ .+.+|+
T Consensus 141 ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~-~LY~aD~~~~~I~~~~~dG~~~~~~~~~--~~~~P~ 217 (619)
T 3s94_A 141 MYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSNLDGTNRQAVVKG--SLPHPF 217 (619)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT-EEEEEETTTCCEEEESSSCCEEC-----------CC
T ss_pred EEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCC-EEEEEeCCCCeEEEecCCCCccEEEEeC--CCCCce
Confidence 7999999888999999999999999988899999999999999 9999999999999999999999998886 589999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC--CCCCCccccCC--Ccce
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ--SPCSHLCLVIP--GGYQ 156 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~--~~C~~~C~~~~--~~~~ 156 (428)
+|++++++||||||.+++|++++++++....++..+...|.+|+++|+.+|+. ..|+|.. .+|+|.|++.+ .+|+
T Consensus 218 gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~-~~n~C~~~ng~Cs~lCl~~~~~~~~~ 296 (619)
T 3s94_A 218 ALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPN-ATNPCGIDNGGCSHLCLMSPVKPFYQ 296 (619)
T ss_dssp CEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCC-CCCTTTTTGGGCSSEEEECSSTTSEE
T ss_pred EEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCC-ccccccCCCCcccceEECCCCCCCce
Confidence 99999999999999999999999987777777888888999999999999985 7899985 48999999988 4799
Q ss_pred ecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCCCCCCCCchhhHHH
Q psy951 157 CACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGIGQGLTLGRSLLY 236 (428)
Q Consensus 157 C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~~~~~~~~~~~~~ 236 (428)
|.||+|| .+.++ +++|.+..
T Consensus 297 C~C~~g~-~l~~d--~~~C~~~~--------------------------------------------------------- 316 (619)
T 3s94_A 297 CACPTGV-KLLEN--GKTCKDGA--------------------------------------------------------- 316 (619)
T ss_dssp EECCTTC-CBCTT--SSCBCSSC---------------------------------------------------------
T ss_pred EeCCchh-eeccc--CcccCCCC---------------------------------------------------------
Confidence 9999999 66543 23333200
Q ss_pred HHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcCCCCCCceeeeecCCcceeeeecCccce
Q psy951 237 IPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFNNGASLGLTIVYSNGPEIRAYETHKRRF 316 (428)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 316 (428)
..-++|++..+|+.++++..++
T Consensus 317 ----------------------------------------------------------~~~Ll~~~~~~i~~i~l~~~~~ 338 (619)
T 3s94_A 317 ----------------------------------------------------------TELLLLARRTDLRRISLDTPDF 338 (619)
T ss_dssp ----------------------------------------------------------SEEEEEEESSCEEEEESSSTTC
T ss_pred ----------------------------------------------------------ceEEEEEcccceEEEecCCCcc
Confidence 0124556666777777776665
Q ss_pred eec---cccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe-ccccceeeeeeccCCeEEEEeCCCCc
Q psy951 317 RDV---ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS-DERRIEALDIDPVDEIIYWVDSYDRN 392 (428)
Q Consensus 317 ~~~---i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~-~~~~p~glavD~~~~~lYwtd~~~~~ 392 (428)
..+ +.++.+|.|||||+.+++|||+|...++|+|+.++|+ ..+.++. ++..|+||||||++++|||||++.++
T Consensus 339 ~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~---~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~ 415 (619)
T 3s94_A 339 TDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS---GSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDR 415 (619)
T ss_dssp CCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred ceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC---ccEEEEECCCCCcCceEEecccCcEEEEeCCCCc
Confidence 543 3788999999999999999999999999999999993 3555554 89999999999999999999999999
Q ss_pred EEEEEccCcceeEEEecccCCCCCCCccccccc
Q psy951 393 IRRSFMLEAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 393 I~~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
|++++++|+.+++|+. +.+..|++||++-
T Consensus 416 I~v~~~~G~~~~~l~~----~~l~~P~~iavdp 444 (619)
T 3s94_A 416 IEVTRLNGTMRKILIS----EDLEEPRAIVLDP 444 (619)
T ss_dssp EEEEETTSCSCEEEEC----TTCCSEEEEEEET
T ss_pred EEEEeCCCCeEEEEEE----CCCCCeeeEEEEc
Confidence 9999999999999984 4578899999874
No 2
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=3.5e-48 Score=408.97 Aligned_cols=293 Identities=31% Similarity=0.533 Sum_probs=246.2
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
||||||+..++|+|++|||+.+++++. ++.+|+||++|+.++ +|||+|.+.++|+++++||++++++.. .+.+|+
T Consensus 137 lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~-~LY~aD~~~~~I~~~d~dG~~~~v~~~---~l~~P~ 211 (628)
T 4a0p_A 137 MYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKR-RLYWTDLDTNLIESSNMLGLNREVIAD---DLPHPF 211 (628)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEE---CCSCEE
T ss_pred EEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccC-EEEEEECCCCEEEEEcCCCCceEEeec---cCCCce
Confidence 799999977899999999999999875 799999999999999 999999999999999999999976655 488999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC--CCCCCccccCC-Cccee
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ--SPCSHLCLVIP-GGYQC 157 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~--~~C~~~C~~~~-~~~~C 157 (428)
+|++++++||||||.+++|.++++..+...+++..++..|++|+++|+.+|+ ..|+|.. ++|+|.|++.+ ++|+|
T Consensus 212 glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~--~~n~C~~~ng~C~~~C~~~~~~~~~C 289 (628)
T 4a0p_A 212 GLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQS--GWNECASSNGHCSHLCLAVPVGGFVC 289 (628)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSC--CCCTTTTTGGGCSSEEEEETTTEEEE
T ss_pred EEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccc--cceEeccCCCCcchhhhcCCCCCeeE
Confidence 9999999999999999999999998776778888888899999999999887 6899985 48999999999 89999
Q ss_pred cCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCCCCCCCCchhhHHHH
Q psy951 158 ACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGIGQGLTLGRSLLYI 237 (428)
Q Consensus 158 ~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~~~~~~~~~~~~~~ 237 (428)
.|++|| .+.++ +++|....
T Consensus 290 ~C~~g~-~l~~d--~~~C~~~~---------------------------------------------------------- 308 (628)
T 4a0p_A 290 GCPAHY-SLNAD--NRTCSAPT---------------------------------------------------------- 308 (628)
T ss_dssp ECSTTC-EECTT--SSCEECCS----------------------------------------------------------
T ss_pred EcCCCc-Eeccc--CCcCcccc----------------------------------------------------------
Confidence 999999 66543 24443210
Q ss_pred HHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcCCCCCCceeeeecCCcceeeeecCccc--
Q psy951 238 PTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFNNGASLGLTIVYSNGPEIRAYETHKRR-- 315 (428)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-- 315 (428)
..++|++..+|+.+.+....
T Consensus 309 ----------------------------------------------------------~~Ll~s~~~~i~~i~l~~~~~~ 330 (628)
T 4a0p_A 309 ----------------------------------------------------------TFLLFSQKSAINRMVIDEQQSP 330 (628)
T ss_dssp ----------------------------------------------------------SEEEEEETTEEEEECCCTTCCC
T ss_pred ----------------------------------------------------------ceeeeeccceEEEEecccccCc
Confidence 02444555556555554332
Q ss_pred -eeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe------ccccceeeeeeccCCeEEEEeC
Q psy951 316 -FRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS------DERRIEALDIDPVDEIIYWVDS 388 (428)
Q Consensus 316 -~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~------~~~~p~glavD~~~~~lYwtd~ 388 (428)
+...+.+++++.+||||+.+++|||+|...++|+|+.++|+ ...+++.. .+..|.||||||++++|||||+
T Consensus 331 ~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~--~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~ 408 (628)
T 4a0p_A 331 DIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGS--QGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCE 408 (628)
T ss_dssp CEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEC--------CCCEEEEEEETTTTEEEEEET
T ss_pred eEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCC--CceEEEEcccccccccCCcceEEeeccCCeEEEEcC
Confidence 22345788999999999999999999999999999999994 33445544 5779999999999999999999
Q ss_pred CCCcEEEEEccCcceeEEEecccCCCCCCCccccccc
Q psy951 389 YDRNIRRSFMLEAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 389 ~~~~I~~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
+.+.|++++++|+.+++|+.. .+..|++||++-
T Consensus 409 ~~~~I~v~~~~G~~~~~l~~~----~l~~Pr~iavdp 441 (628)
T 4a0p_A 409 ATNVINVTRLDGRSVGVVLKG----EQDRPRAVVVNP 441 (628)
T ss_dssp TTTEEEEEETTSCEEEEEEEC----TTCCEEEEEEET
T ss_pred CCCEEEEEECCCCeEEEEEeC----CCCceeeEEEec
Confidence 999999999999999999855 456799999874
No 3
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.97 E-value=2.1e-30 Score=251.74 Aligned_cols=172 Identities=38% Similarity=0.723 Sum_probs=152.7
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+||+..++|+|++|||+.+++++..++.+|+|||+|+.++ +|||+|...++|+++++||+++++++.+ .+.+|+
T Consensus 136 ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~--~~~~P~ 212 (318)
T 3sov_A 136 MYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSNLDGTNRQAVVKG--SLPHPF 212 (318)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECS--CCSCEE
T ss_pred EEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEcCCCCceEEEecC--CCCCce
Confidence 7999998777999999999999999888899999999999989 9999999999999999999999999976 589999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC--CCCCCccccCCC--cce
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ--SPCSHLCLVIPG--GYQ 156 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~--~~C~~~C~~~~~--~~~ 156 (428)
+|+++++.|||+||.+++|.++++..+.....+...+..|++|+++++.+|+. ..|+|.. .+|+|+|++.++ +|+
T Consensus 213 glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~q~~-~~n~C~~~ng~Cs~~C~~~~~~~~~~ 291 (318)
T 3sov_A 213 ALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPN-ATNPCGIDNGGCSHLCLMSPVKPFYQ 291 (318)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGGGSCC-CCCTTTTTGGGCSSEEEECSSTTSEE
T ss_pred EEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEEeccccccc-cccccccCCCCcceEEecCCCCCCeE
Confidence 99999999999999999999999965555566777788999999999999885 6899975 389999999985 799
Q ss_pred ecCCCCCCCCCCCCCCcccccCc
Q psy951 157 CACPENATPKLPGVAEIRCSAAV 179 (428)
Q Consensus 157 C~C~~g~~~~~~~~~g~~C~~~~ 179 (428)
|.||.|| .+.++ +++|.+..
T Consensus 292 C~C~~g~-~l~~d--~~~c~~~~ 311 (318)
T 3sov_A 292 CACPTGV-KLLEN--GKTCKDGN 311 (318)
T ss_dssp EECSTTC-CBCTT--SSCBCC--
T ss_pred EECCCCC-EECCC--CCCCCCCC
Confidence 9999999 77654 57777643
No 4
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.97 E-value=8.4e-30 Score=255.29 Aligned_cols=172 Identities=30% Similarity=0.652 Sum_probs=154.0
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+||+..++|++++|||+.+++++..++.+|+|||||+.++ +|||+|...++|+++++||+++++++.....+.+|+
T Consensus 216 ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~ 294 (400)
T 3p5b_L 216 MYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 294 (400)
T ss_dssp EEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEE
T ss_pred EEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCE
Confidence 7999999867999999999999999988899999999999999 999999999999999999999999988654689999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCC-----CCCCCCccccCCC--
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCS-----QSPCSHLCLVIPG-- 153 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~-----~~~C~~~C~~~~~-- 153 (428)
+|++++++|||+||.+++|.++++..+....++..++..|++|+++|+.+|+. ..|+|. +++|+|+|++.+.
T Consensus 295 gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~qp~-~~n~c~~~~~~ng~C~~lC~~~~~~~ 373 (400)
T 3p5b_L 295 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPR-GVNWCERTTLSNGGCQYLCLPAPQIN 373 (400)
T ss_dssp EEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGGSCC-CCCSSSSSSSGGGGCSSEEEECCCSS
T ss_pred EEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeeccCCC-CCCccccccCCCcCcCCeecCCCccc
Confidence 99999999999999999999999776666677778889999999999999986 789996 3589999998874
Q ss_pred ----cceecCCCCCCCCCCCCCCccccc
Q psy951 154 ----GYQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 154 ----~~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
+|+|.||.|| .+.++ +++|.+
T Consensus 374 ~~~~~~~C~C~~g~-~l~~d--~~~C~~ 398 (400)
T 3p5b_L 374 PHSPKFTCACPDGM-LLARD--MRSCLT 398 (400)
T ss_dssp TTCCSEEEECCTTC-EECTT--SSSEES
T ss_pred CCCCCeeEECCCCC-EECCC--CCccCC
Confidence 7999999999 67654 577764
No 5
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.96 E-value=3.2e-29 Score=243.23 Aligned_cols=171 Identities=30% Similarity=0.657 Sum_probs=150.1
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+|++..++|++++|||+.+++++...+.+|+||++|+.++ +|||+|...++|+++++||+++++++.....+.+|.
T Consensus 134 ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~ 212 (316)
T 1ijq_A 134 MYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 212 (316)
T ss_dssp EEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred EEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEecCCCceEEEeecCCccCCcE
Confidence 6999998756999999999999988887899999999999989 999999999999999999999999987533678999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCCC-----CCCCccccCC---
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQS-----PCSHLCLVIP--- 152 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~~-----~C~~~C~~~~--- 152 (428)
+|++++++|||+|+.+++|.++++..+.....+..++..|.+|+++++.+|+. ..|+|..+ +|+|+|++.|
T Consensus 213 giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~~qp~-~~n~C~~~~~~ng~Cs~~C~~~p~~~ 291 (316)
T 1ijq_A 213 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPR-GVNWCERTTLSNGGCQYLCLPAPQIN 291 (316)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCC-CCCTTSSSSSGGGGCSSEEEECCCCS
T ss_pred EEEEECCEEEEEECCCCeEEEEeCCCCcceEEEecCCCCceEEEEeccccCCc-ccccccccccCCCCcCcccCCCcccc
Confidence 99999999999999999999999865555566667788999999999999886 77999853 7999999886
Q ss_pred ---CcceecCCCCCCCCCCCCCCcccc
Q psy951 153 ---GGYQCACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 153 ---~~~~C~C~~g~~~~~~~~~g~~C~ 176 (428)
++|+|.||.|| .+.++ +++|.
T Consensus 292 ~~~~~~~C~C~~g~-~l~~d--~~~C~ 315 (316)
T 1ijq_A 292 PHSPKFTCACPDGM-LLARD--MRSCL 315 (316)
T ss_dssp TTCCSEEEECCTTC-EECTT--SSCEE
T ss_pred CCCCCeEeeCCCCC-EECCC--CCccC
Confidence 47999999999 66654 46664
No 6
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.96 E-value=8.1e-30 Score=268.55 Aligned_cols=168 Identities=33% Similarity=0.644 Sum_probs=152.0
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
||||||+..++|+|++|||+.+++++.+.+.+|+|||||+.++ +|||+|.+.++|+++++||+++++++.. .+.+|+
T Consensus 449 ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~-~LY~aD~~~~~I~~~~~dG~~~~~~~~~--~l~~P~ 525 (619)
T 3s94_A 449 MYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEG-KIYWGDAKTDKIEVMNTDGTGRRVLVED--KIPHIF 525 (619)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEESSSCCCEEEEEC--CCCSSC
T ss_pred EEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCC-EEEEEECCCCEEEEEecCCCceEEEecc--CCCCcE
Confidence 7999999878999999999999999988899999999999999 9999999999999999999999999886 689999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC--CCCCCccccCCCcceec
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ--SPCSHLCLVIPGGYQCA 158 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~--~~C~~~C~~~~~~~~C~ 158 (428)
+|++++++||||||.+++|+++++.++ ..+++..++..|++|++++...|. ..|+|.. ++|+|.|++.+++++|.
T Consensus 526 glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~C~~~ng~C~~~C~~~~~~~~C~ 602 (619)
T 3s94_A 526 GFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQLPDLMGLKATNVHRVI--GSNPCAEENGGCSHLCLYRPQGLRCA 602 (619)
T ss_dssp CEEEETTEEEEECTTSSCEEEEESSSC-CEEEEECSCCCEEEEEEEESSCCC--CCCGGGSGGGGCSSEEEEETTEEEEE
T ss_pred EEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEecCCCCCceeeeccccccc--ccccCCCCCCChhHhhccCCCCeEEE
Confidence 999999999999999999999999976 456777788999999999887654 7899974 48999999999999999
Q ss_pred CCCCCCCCCCCCCCccccc
Q psy951 159 CPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 159 C~~g~~~~~~~~~g~~C~~ 177 (428)
|+.|| .+.++ +++|.+
T Consensus 603 C~~g~-~l~~d--~~~C~~ 618 (619)
T 3s94_A 603 CPIGF-ELISD--MKTCIV 618 (619)
T ss_dssp CCTTC-EECSS--TTCEEC
T ss_pred CCCCC-EECCC--CCcCCC
Confidence 99999 66654 467754
No 7
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.96 E-value=1.6e-29 Score=248.68 Aligned_cols=170 Identities=35% Similarity=0.692 Sum_probs=152.0
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+|++..++|+|++|||+.+++++..++.+|+|||+|+.++ +|||+|...++|+++++||+++++++.. .+.+|+
T Consensus 173 ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~~dG~~~~~~~~~--~~~~P~ 249 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPF 249 (349)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEE
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEeCCCCceEEEEeC--CCCCce
Confidence 7999999856999999999999998888899999999999999 9999999999999999999999998876 589999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCCC--CCCCccccCCCcceec
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQS--PCSHLCLVIPGGYQCA 158 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~~--~C~~~C~~~~~~~~C~ 158 (428)
+|++++++|||+||.+++|.++++..+....++...+..|++|+++|+.+|+. +.|+|..+ +|+|+|++.+.+++|.
T Consensus 250 giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~qp~-~~n~C~~~~g~C~~lCl~~~~~~~C~ 328 (349)
T 3v64_C 250 AITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPA-GKNRCGDNNGGCTHLCLPSGQNYTCA 328 (349)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGGGSCC-CCCTTTTGGGGCSSEEECCTTSCEEE
T ss_pred EEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccccCcc-ccCcccCCCCCcccEeecCCCCCeeE
Confidence 99999999999999999999999765556666777889999999999999886 78999865 6999999999999999
Q ss_pred CCCCCCCCCCCCCCcccccC
Q psy951 159 CPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 159 C~~g~~~~~~~~~g~~C~~~ 178 (428)
||.|| . .++ +++|...
T Consensus 329 C~~g~-~-~~d--~~~C~~~ 344 (349)
T 3v64_C 329 CPTGF-R-KIN--SHACALE 344 (349)
T ss_dssp CCTTE-E-EET--TTEEEEG
T ss_pred CCCCC-c-CCC--CCcccch
Confidence 99999 4 332 4777654
No 8
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.96 E-value=7.2e-29 Score=266.82 Aligned_cols=173 Identities=30% Similarity=0.650 Sum_probs=156.2
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+||+..++|++++|||+.+++++..++.+|+|||||+.++ +|||+|.+.++|+++++||+++++++.....+.+|+
T Consensus 528 LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~ 606 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 606 (791)
T ss_dssp EEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred EEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCC
Confidence 7999999867999999999999999998999999999999999 999999999999999999999999998655789999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC-----CCCCCccccCCC--
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ-----SPCSHLCLVIPG-- 153 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~-----~~C~~~C~~~~~-- 153 (428)
+|++++++|||+|+.+++|+++++..+....++..++..|++|+++|+.+|+. ..|+|.. ++|+|+|++.|.
T Consensus 607 glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Qp~-~~N~C~~~~~~ng~CshlCl~~p~~~ 685 (791)
T 3m0c_C 607 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPR-GVNWCERTTLSNGGCQYLCLPAPQIN 685 (791)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCC-CCCTTTSSSSGGGGCSSEEEECCCCS
T ss_pred EEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccCCC-CCCcccccCCCCcCcCeeecCCCCcC
Confidence 99999999999999999999999876667777778899999999999999986 7899985 589999998874
Q ss_pred ----cceecCCCCCCCCCCCCCCcccccC
Q psy951 154 ----GYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 154 ----~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
+|+|.||.|| .|.++ +++|...
T Consensus 686 ~~~~~~~C~Cp~g~-~L~~d--~~tC~~~ 711 (791)
T 3m0c_C 686 PHSPKFTCACPDGM-LLARD--MRSCLTE 711 (791)
T ss_dssp TTCCSEEEECCTTC-EECTT--SSCEEC-
T ss_pred CCCCCceeECCCCC-EECCC--CCcCCCC
Confidence 7999999999 67654 5788653
No 9
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.96 E-value=1e-28 Score=247.43 Aligned_cols=203 Identities=24% Similarity=0.466 Sum_probs=164.0
Q ss_pred CCCCCC--CCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCc
Q psy951 137 NPCSQS--PCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFA 214 (428)
Q Consensus 137 n~C~~~--~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~ 214 (428)
|+|..+ .|++.|.+.+++|.|.|++|| .+.+ +..|++.++|.. +.+|.+ .|.+.. |+|.|.|++||.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~-~~~~---~~~C~dideC~~----~~~C~~--~C~n~~-g~~~C~C~~g~~ 69 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGF-QLVA---QRRCEDIDECQD----PDTCSQ--LCVNLE-GGYKCQCEEGFQ 69 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTE-EECS---SSCEEECCCCST----TSSCSS--CCBCCS-SSCBCCCCTTCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCC-CcCC---CCcccCchhhhc----cCCCCC--ccCCCc-cceeeecccccc
Confidence 578765 588899999999999999999 5533 589998776542 235654 898887 689999999999
Q ss_pred cC----ccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcCC
Q psy951 215 GT----FCENYTGIGQGLTLGRSLLYIPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFNN 290 (428)
Q Consensus 215 G~----~Ce~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~ 290 (428)
+. .|....
T Consensus 70 ~~~~~~~C~~~~-------------------------------------------------------------------- 81 (400)
T 3p5b_L 70 LDPHTKACKAVG-------------------------------------------------------------------- 81 (400)
T ss_dssp CCTTTSSCCCST--------------------------------------------------------------------
T ss_pred ccccccceeecc--------------------------------------------------------------------
Confidence 64 232110
Q ss_pred CCCCceeeeecCCcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccC-CceEEEEe-cc
Q psy951 291 GASLGLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK-GQVQAVIS-DE 368 (428)
Q Consensus 291 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~-~~~~~i~~-~~ 368 (428)
....+++++..+|+.++++...+..+++++..|.+||+|+.+++|||+|...++|+|..++|... ...+.++. ++
T Consensus 82 ---~~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 82 ---SIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp ---TSCEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred ---ccceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 01257789999999999999999999999999999999999999999999999999999998321 23455555 89
Q ss_pred ccceeeeeeccCCeEEEEeCCCCcEEEEEccCcceeEEEecccCCCCCCCccccccc
Q psy951 369 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 369 ~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
..|.||||||++++|||+|.+...|++++++|+.+++++.. .+..|++||+|-
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp 211 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDP 211 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC----SSCCEEEEEEET
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC----CCCCcceEEEec
Confidence 99999999999999999999999999999999999999854 466688898874
No 10
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.96 E-value=1.8e-28 Score=244.56 Aligned_cols=168 Identities=36% Similarity=0.703 Sum_probs=150.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+|++..++|+|++|||+.+++++..++.+|+|||+|+.++ +|||+|...++|+++++||+++++++.. .+.+|+
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~--~~~~P~ 292 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPF 292 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEEEECTTSCSCEEEECS--SCSSEE
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEEEEeCCCCeeEEEEEC--CCCCce
Confidence 7999999856999999999999999988899999999999889 9999999999999999999999998886 588999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCCC--CCCCccccCCCcceec
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQS--PCSHLCLVIPGGYQCA 158 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~~--~C~~~C~~~~~~~~C~ 158 (428)
+|++++++|||+||.+++|.++++..+....++...+..|++|+++++.+|+. +.|+|..+ +|+|+|++.+.+|+|.
T Consensus 293 giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~~-~~n~C~~~ng~C~~lCl~~~~~~~C~ 371 (386)
T 3v65_B 293 AITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPA-GKNRCGDNNGGCTHLCLPSGQNYTCA 371 (386)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSCC-CCCTTTTSCTTSSSEEECCSSSCEEE
T ss_pred EEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEEchhcCcC-CcCccccCCCCCCceeeeCCCCCeeE
Confidence 99999999999999999999999765556667777889999999999999986 78999854 6999999999999999
Q ss_pred CCCCCCCCCCCCCCcccc
Q psy951 159 CPENATPKLPGVAEIRCS 176 (428)
Q Consensus 159 C~~g~~~~~~~~~g~~C~ 176 (428)
||.|| . .++ +++|.
T Consensus 372 C~~g~-~-~~d--~~~C~ 385 (386)
T 3v65_B 372 CPTGF-R-KIN--SHACA 385 (386)
T ss_dssp CCTTC-B-CSS--SSCCB
T ss_pred CCCCC-c-CCC--CCccC
Confidence 99999 4 332 46664
No 11
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.96 E-value=5.7e-29 Score=262.36 Aligned_cols=170 Identities=31% Similarity=0.625 Sum_probs=149.5
Q ss_pred CEEEeeCCCC-eEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccce
Q psy951 1 MFWAETGASP-RIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHP 79 (428)
Q Consensus 1 lyWtd~~~~~-~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p 79 (428)
||||||+..+ +|+|++|||+.+++++.+++.+|+|||||+.++ +|||+|.+.++|+++++||++|+++... .+.+|
T Consensus 446 ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~-~LYw~D~~~~~I~~~~~dG~~r~~~~~~--~~~~P 522 (628)
T 4a0p_A 446 MYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLG-KLFWADSDLRRIESSDLSGANRIVLEDS--NILQP 522 (628)
T ss_dssp EEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECS--SCSCE
T ss_pred EEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCC-EEEEEeCCCCEEEEEeCCCCceEEEEcC--CCCCc
Confidence 7999999875 999999999999999998999999999999999 9999999999999999999999999875 68999
Q ss_pred eeeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC--CCCCCccccCCC-cce
Q psy951 80 ISLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ--SPCSHLCLVIPG-GYQ 156 (428)
Q Consensus 80 ~~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~--~~C~~~C~~~~~-~~~ 156 (428)
++|++++++|||+||.+.+|++++|..+.....+...+..|++|.+++...+.....|+|.. ++|+|.|++.+. .++
T Consensus 523 ~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~~~~~~~~i~~~~~~~~~~~~~n~c~~~ng~C~~~C~~~~~~~~~ 602 (628)
T 4a0p_A 523 VGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTR 602 (628)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEECCCTTEEEEEEECCCCHHHHHHSTTTTGGGGCSSEEEECTTSCEE
T ss_pred EEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEeccCCCCcceEEEeecccCccccccCCCCCCCcchhcccCCCCCee
Confidence 99999999999999999999999999666677777778889999998875433235799974 489999999884 689
Q ss_pred ecCCCCCCCCCCCCCCcccc
Q psy951 157 CACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 157 C~C~~g~~~~~~~~~g~~C~ 176 (428)
|.||.|| .+.++ +++|.
T Consensus 603 C~C~~g~-~l~~d--~~~~~ 619 (628)
T 4a0p_A 603 CSCPMHL-VLLQD--ELSCG 619 (628)
T ss_dssp EECCTTE-EECTT--SSCEE
T ss_pred eeCCCCC-EECCC--CCcCC
Confidence 9999999 66654 46664
No 12
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.96 E-value=1.5e-28 Score=245.06 Aligned_cols=203 Identities=21% Similarity=0.409 Sum_probs=127.6
Q ss_pred CCCCCCCC--CCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCC
Q psy951 135 APNPCSQS--PCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQD 212 (428)
Q Consensus 135 ~~n~C~~~--~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g 212 (428)
..|+|..+ +|++.|.+..++|.|.|++|| .+.++ +..|.+.+++.. ..+|.++ |.+.. |+|.|.|++|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~-~l~~~--~~~C~d~~eC~~----~~~C~~~--C~~~~-g~~~C~C~~g 71 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGY-RLTED--GRTCQDVNECAE----EGYCSQG--CTNSE-GAFQCWCEAG 71 (386)
T ss_dssp ---------------------------------------------------------CCTTE--EC------CCEECCTT
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCc-eECCC--CCccCccceeCC----cCcccCc--CCCCC-CCCeEEECCC
Confidence 35889865 599999888888999999999 66543 689987766431 1256553 98887 6899999999
Q ss_pred Cc----cCccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCc
Q psy951 213 FA----GTFCENYTGIGQGLTLGRSLLYIPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAF 288 (428)
Q Consensus 213 y~----G~~Ce~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~ 288 (428)
|. |..|+.....
T Consensus 72 ~~l~~d~~~C~~~~~~---------------------------------------------------------------- 87 (386)
T 3v65_B 72 YELRPDRRSCKALGPE---------------------------------------------------------------- 87 (386)
T ss_dssp EEECTTSSCEEECSSC----------------------------------------------------------------
T ss_pred ceEcCCCCeECCcccc----------------------------------------------------------------
Confidence 98 6667542211
Q ss_pred CCCCCCceeeeecCCcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEE-ec
Q psy951 289 NNGASLGLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVI-SD 367 (428)
Q Consensus 289 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~-~~ 367 (428)
..+++++..+|+.++++...+..+++++..|.++++|+.+++|||+|...++|+|..++| ...+.++ .+
T Consensus 88 -------~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g---~~~~~~~~~~ 157 (386)
T 3v65_B 88 -------PVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNG---SNVEEVVSTG 157 (386)
T ss_dssp -------CEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CCEEEEECSS
T ss_pred -------ceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC---CCcEEEEeCC
Confidence 246778888999999988888888899999999999999999999999999999999998 3355555 48
Q ss_pred cccceeeeeeccCCeEEEEeCCCCcEEEEEccCcceeEEEecccCCCCCCCccccccc
Q psy951 368 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 368 ~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
+..|.||||||.+++|||+|.+.++|++++++|+.+++++. ..+..|++||++-
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~----~~l~~P~giavdp 211 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHP 211 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC----SSCSCEEEEEEET
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec----CCCCCCcEEEEEc
Confidence 89999999999999999999999999999999999999984 4567788999873
No 13
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.94 E-value=3e-25 Score=218.23 Aligned_cols=204 Identities=26% Similarity=0.454 Sum_probs=170.4
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+|.... +|.|++++|+..+.++..++..|.|||+|+.++ +|||+|...++|+++++||+.+++++.. .+..|.
T Consensus 87 ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g-~ly~~d~~~~~I~~~~~dG~~~~~l~~~--~l~~P~ 162 (349)
T 3v64_C 87 VFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANLDGAHRKVLLWQ--SLEKPR 162 (349)
T ss_dssp EEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECT--TCSCEE
T ss_pred EEEEeccCC-ceEEEecCCCCceEEEeCCCCCccEEEEecCCC-eEEEEcCCCCeEEEEcCCCCceEEEEeC--CCCCcc
Confidence 699998776 899999999998888888899999999999999 8999999999999999999999998876 578888
Q ss_pred eeecc--ccEEEEEeCCC-CceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCCCCCCCccccCCCccee
Q psy951 81 SLDVF--ENNIYWLARDT-GSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQSPCSHLCLVIPGGYQC 157 (428)
Q Consensus 81 ~l~~~--~~~lYwtD~~~-~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~~~C~~~C~~~~~~~~C 157 (428)
+|++. +++|||+|+.. ++|++++++|+....++.
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~------------------------------------------- 199 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD------------------------------------------- 199 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-------------------------------------------
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-------------------------------------------
Confidence 87775 89999999987 889988887643211000
Q ss_pred cCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCCCCCCCCchhhHHHH
Q psy951 158 ACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGIGQGLTLGRSLLYI 237 (428)
Q Consensus 158 ~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~~~~~~~~~~~~~~ 237 (428)
T Consensus 200 -------------------------------------------------------------------------------- 199 (349)
T 3v64_C 200 -------------------------------------------------------------------------------- 199 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcCCCCCCceeeeecCCcceeeeecCcccee
Q psy951 238 PTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFNNGASLGLTIVYSNGPEIRAYETHKRRFR 317 (428)
Q Consensus 238 ~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 317 (428)
T Consensus 200 -------------------------------------------------------------------------------- 199 (349)
T 3v64_C 200 -------------------------------------------------------------------------------- 199 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe-ccccceeeeeeccCCeEEEEeCCCCcEEEE
Q psy951 318 DVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS-DERRIEALDIDPVDEIIYWVDSYDRNIRRS 396 (428)
Q Consensus 318 ~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~-~~~~p~glavD~~~~~lYwtd~~~~~I~~~ 396 (428)
.++..|.||++|+.+++|||+|...++|.+..++|. ..++++. ++..|.||||| .++|||+|.+...|.++
T Consensus 200 ---~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~---~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 200 ---THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSA 271 (349)
T ss_dssp ---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred ---CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC---ceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEE
Confidence 011246699999999999999999999999999993 3555554 89999999996 78999999999999999
Q ss_pred E-ccCcceeEEEecccCCCCCCCcccccc
Q psy951 397 F-MLEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 397 ~-~~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+ .+|+.++++. .+...|.+|++.
T Consensus 272 ~~~~G~~~~~i~-----~~~~~p~gi~v~ 295 (349)
T 3v64_C 272 NKFTGKNQEIIR-----NKLHFPMDIHTL 295 (349)
T ss_dssp ETTTCCSCEEEE-----CSCSCCCCEEEE
T ss_pred EccCCCccEEec-----cCCCCCceEEEE
Confidence 8 8998888775 345667777664
No 14
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=249.07 Aligned_cols=204 Identities=24% Similarity=0.463 Sum_probs=163.6
Q ss_pred CCCCCCC--CCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCC
Q psy951 136 PNPCSQS--PCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDF 213 (428)
Q Consensus 136 ~n~C~~~--~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy 213 (428)
.++|..+ .|++.|.+.+++|.|.|++|| .+.+ +..|.+++++. .++.|. +.|++.. |+|+|.|++||
T Consensus 312 ~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy-~l~~---g~~C~dideC~----~~~~C~--~~C~n~~-gsy~C~C~~Gy 380 (791)
T 3m0c_C 312 TNECLDNNGGCSHVCNDLKIGYECLCPDGF-QLVA---QRRCEDIDECQ----DPDTCS--QLCVNLE-GGYKCQCEEGF 380 (791)
T ss_dssp CCSTTTGGGGCSSEEEECSBSEEEECCTTC-EEET---TTEEECCCCCS----SSSSCT--TTCCBCS-SCBCCCCCSSE
T ss_pred cccccccccCccccccCCCCCcccCCCCCC-ccCC---CCccccCcccC----CCCCCC--CeeecCC-CCceeecCCCC
Confidence 5677653 688899999999999999999 5532 58999877654 233453 5898887 67999999999
Q ss_pred ccC----ccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcC
Q psy951 214 AGT----FCENYTGIGQGLTLGRSLLYIPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFN 289 (428)
Q Consensus 214 ~G~----~Ce~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~ 289 (428)
.+. .|+....
T Consensus 381 ~l~~~~~~C~~~~~------------------------------------------------------------------ 394 (791)
T 3m0c_C 381 QLDPHTKACKAVGS------------------------------------------------------------------ 394 (791)
T ss_dssp ECCSSCCCCEETTS------------------------------------------------------------------
T ss_pred EeCCCCceeeeccc------------------------------------------------------------------
Confidence 852 3322100
Q ss_pred CCCCCceeeeecCCcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccC-CceEEEEe-c
Q psy951 290 NGASLGLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK-GQVQAVIS-D 367 (428)
Q Consensus 290 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~-~~~~~i~~-~ 367 (428)
-..+++++..+|+.+++....+..++.+++.++||+||+.+++|||+|...++|+|+.++|... +..++++. +
T Consensus 395 -----~p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 395 -----IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp -----CCEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred -----ccccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC
Confidence 0246779999999999999999999999999999999999999999999999999999998421 23456665 8
Q ss_pred cccceeeeeeccCCeEEEEeCCCCcEEEEEccCcceeEEEecccCCCCCCCccccccc
Q psy951 368 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 368 ~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
+..|.||||||++++|||+|.+..+|++++++|+.+++|+... +..|++||||-
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~----l~~P~gIaVDp 523 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN----GSKPRAIVVDP 523 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT----TCCEEEEEEET
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCC----CCCcceEEEec
Confidence 9999999999999999999999999999999999999998544 56688999874
No 15
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.94 E-value=1.5e-24 Score=210.57 Aligned_cols=203 Identities=22% Similarity=0.376 Sum_probs=165.7
Q ss_pred CEEEeeCCCCeEEEEEcCCCCc-EEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccce
Q psy951 1 MFWAETGASPRIESAWMDGSHR-RSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHP 79 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~-~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p 79 (428)
|||+|.... +|.|++++|+.. +.++..++..|.|||+|+.++ .|||+|...++|++++++|+.+++++.. .+..|
T Consensus 49 lyw~D~~~~-~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g-~ly~~d~~~~~I~~~~~dG~~~~~l~~~--~~~~P 124 (318)
T 3sov_A 49 IYWSDVSEE-AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE-KLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQP 124 (318)
T ss_dssp EEEEETTTT-EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECS--SCSSE
T ss_pred EEEEECCCC-cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC-eEEEEECCCCEEEEEECCCCcEEEEEeC--CCCCc
Confidence 699998776 899999999863 456667889999999999999 8999999999999999999999998876 57888
Q ss_pred eeeecc--ccEEEEEeCC-CCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCCCCCCCccccCCCcce
Q psy951 80 ISLDVF--ENNIYWLARD-TGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQSPCSHLCLVIPGGYQ 156 (428)
Q Consensus 80 ~~l~~~--~~~lYwtD~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~~~C~~~C~~~~~~~~ 156 (428)
.+|++. +++|||+|+. .++|++++++|+....++.
T Consensus 125 ~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~------------------------------------------ 162 (318)
T 3sov_A 125 RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN------------------------------------------ 162 (318)
T ss_dssp EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC------------------------------------------
T ss_pred cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE------------------------------------------
Confidence 877764 7899999985 6788888887643321110
Q ss_pred ecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCCCCCCCCchhhHHH
Q psy951 157 CACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGIGQGLTLGRSLLY 236 (428)
Q Consensus 157 C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~~~~~~~~~~~~~ 236 (428)
T Consensus 163 -------------------------------------------------------------------------------- 162 (318)
T 3sov_A 163 -------------------------------------------------------------------------------- 162 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcCCCCCCceeeeecCCcceeeeecCccce
Q psy951 237 IPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFNNGASLGLTIVYSNGPEIRAYETHKRRF 316 (428)
Q Consensus 237 ~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 316 (428)
T Consensus 163 -------------------------------------------------------------------------------- 162 (318)
T 3sov_A 163 -------------------------------------------------------------------------------- 162 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe-ccccceeeeeeccCCeEEEEeCCCCcEEE
Q psy951 317 RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS-DERRIEALDIDPVDEIIYWVDSYDRNIRR 395 (428)
Q Consensus 317 ~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~-~~~~p~glavD~~~~~lYwtd~~~~~I~~ 395 (428)
.++..|.+|++|+.++.|||+|....+|++..++| ...++++. .+..|.|||+| .+.|||+|.+...|.+
T Consensus 163 ----~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG---~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 163 ----SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG---TNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILA 233 (318)
T ss_dssp ----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred ----CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC---CceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEE
Confidence 01123568999999999999999999999999999 34666666 89999999999 7899999999999999
Q ss_pred EEc-cCcceeEEEecccCCCCCCCccccc
Q psy951 396 SFM-LEAQKGQVQAGASRHQNGVPASSQR 423 (428)
Q Consensus 396 ~~~-~g~~~~~l~~~~~~~~~~~p~~~~~ 423 (428)
++. +|+..+++. .|...|.+|++
T Consensus 234 ~~~~~G~~~~~i~-----~~~~~P~~i~v 257 (318)
T 3sov_A 234 CNKYTGEGLREIH-----SDIFSPMDIHA 257 (318)
T ss_dssp EETTTCCSCEEEE-----CCCSSCCCEEE
T ss_pred EECCCCCceEEEe-----CCCCCCcEEEE
Confidence 998 687776664 34455666665
No 16
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.93 E-value=7.8e-26 Score=241.56 Aligned_cols=173 Identities=30% Similarity=0.649 Sum_probs=151.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+|++..++|++++|||+.+++++...+.+|+|||||+.++ +|||+|...++|++++++|+++++++.....+.+|+
T Consensus 510 ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~ 588 (699)
T 1n7d_A 510 MYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 588 (699)
T ss_dssp CEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTC-CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCC
T ss_pred EEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCC-EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCce
Confidence 7999998766999999999999988887899999999999988 999999999999999999999999987544688999
Q ss_pred eeeccccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccccccCCCCCCCCCC-----CCCCCccccCC---
Q psy951 81 SLDVFENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHAQRYNTSAPNPCSQ-----SPCSHLCLVIP--- 152 (428)
Q Consensus 81 ~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~~~~~~~~~n~C~~-----~~C~~~C~~~~--- 152 (428)
+|++++++|||+||.+++|.++++..+....++..++..|++|+++++.+|+. ..|+|.. ++|+|+|++.|
T Consensus 589 glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp~-~~n~C~~~~~~ng~Cs~lCl~~p~~~ 667 (699)
T 1n7d_A 589 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPR-GVNWCERTTLSNGGCQYLCLPAPQIN 667 (699)
T ss_dssp CCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSCC-SCCSSCSSSCSSCSCTTCCBCCCCCT
T ss_pred EeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCCC-CCCCccccCCCCCCCCcccCcCcccC
Confidence 99999999999999999999999976666666777788999999999999986 7899985 38999999765
Q ss_pred ---CcceecCCCCCCCCCCCCCCcccccC
Q psy951 153 ---GGYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 153 ---~~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
.+|+|.||.|| .|.++ +++|...
T Consensus 668 ~~~~~~~C~Cp~g~-~l~~d--~~~C~~~ 693 (699)
T 1n7d_A 668 PHSPKFTCACPDGM-LLARD--MRSCLTE 693 (699)
T ss_dssp TCSCSCBCCCCSSC-EECSS--TTCEECC
T ss_pred CCCCCcEEECcCCC-EECCC--CCccCCC
Confidence 37999999999 66654 4677653
No 17
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.92 E-value=9.4e-23 Score=197.58 Aligned_cols=103 Identities=25% Similarity=0.472 Sum_probs=86.0
Q ss_pred CEEEeeCCCCeEEEEEcCC----CCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCc
Q psy951 1 MFWAETGASPRIESAWMDG----SHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKL 76 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG----~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~ 76 (428)
|||+|.... +|.+.+++| +..+.++...+..|.|||+|+.++ +|||+|...++|++++++|+.+++++.. .+
T Consensus 44 ly~~D~~~~-~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~-~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~~ 119 (316)
T 1ijq_A 44 IYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADTKGVKRKTLFRE--NG 119 (316)
T ss_dssp EEEEETTTT-EEEEEEC--------CEEEECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEETTSSSEEEEEEC--TT
T ss_pred EEEEECCCC-cEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC-eEEEEECCCCEEEEEeCCCCceEEEEEC--CC
Confidence 699998766 899999998 666777766788999999999989 8999999999999999999999988876 47
Q ss_pred cceeeeecc--ccEEEEEeCCC-CceeeeccCCC
Q psy951 77 QHPISLDVF--ENNIYWLARDT-GSLYKQDKFGR 107 (428)
Q Consensus 77 ~~p~~l~~~--~~~lYwtD~~~-~~I~~~~~~g~ 107 (428)
.+|.+|++. +++|||+|+.. ++|++++++|+
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 788888774 78999999875 78888887754
No 18
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.91 E-value=5.4e-24 Score=227.35 Aligned_cols=205 Identities=24% Similarity=0.483 Sum_probs=159.9
Q ss_pred CCCCCCCC--CCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCC
Q psy951 135 APNPCSQS--PCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQD 212 (428)
Q Consensus 135 ~~n~C~~~--~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g 212 (428)
..++|..+ +|++.|.+.+++|.|.|++|| .+.+ +..|++++++... . +|. +.|++.. |+|+|.|++|
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~-~~~~---~~~C~dideC~~~--~--~C~--~~C~n~~-g~y~C~C~~G 361 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGF-QLVA---QRRCEDIDECQDP--D--TCS--QLCVNLE-GGYKCQCEEG 361 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSS-CCCS---SSCCCCCCCCSSS--S--SCT--TTCCBCS-SCBCCCCCSS
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCe-EcCC---CCcccCccccCCC--C--ccc--cccccCC-CCeeeeeecc
Confidence 35778753 699999999999999999999 5533 5889977765322 2 453 4788887 6799999999
Q ss_pred CccC----ccCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCc
Q psy951 213 FAGT----FCENYTGIGQGLTLGRSLLYIPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAF 288 (428)
Q Consensus 213 y~G~----~Ce~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~ 288 (428)
|.+. .|+....
T Consensus 362 ~~~~~~~~~C~~~~~----------------------------------------------------------------- 376 (699)
T 1n7d_A 362 FQLDPHTKACKAVGS----------------------------------------------------------------- 376 (699)
T ss_dssp CBCCSSCCCCBCCSS-----------------------------------------------------------------
T ss_pred cccCCCCCccccccc-----------------------------------------------------------------
Confidence 9953 2332100
Q ss_pred CCCCCCceeeeecCCcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccC-CceEEEE-e
Q psy951 289 NNGASLGLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK-GQVQAVI-S 366 (428)
Q Consensus 289 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~-~~~~~i~-~ 366 (428)
...+++++..+|+.+++....+..++..+..|++|++|+.+++|||+|...++|+|+.++|... .....++ .
T Consensus 377 ------~~~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~ 450 (699)
T 1n7d_A 377 ------IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 450 (699)
T ss_dssp ------CCCBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS
T ss_pred ------ceeEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC
Confidence 0236678888999999998888889999999999999999999999999999999999987211 1233344 4
Q ss_pred ccccceeeeeeccCCeEEEEeCCCCcEEEEEccCcceeEEEecccCCCCCCCccccccc
Q psy951 367 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 367 ~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
++..|.||||||.+++|||+|.+...|.+++++|+.+++++.. .+..|++||++-
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~----~~~~P~giavDp 505 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----QGSKPRAIVVDP 505 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC----SSCCCCCEECCS
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC----CCCCcceEEEcc
Confidence 7889999999999999999999999999999999999988744 456678888863
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.86 E-value=1.9e-19 Score=169.21 Aligned_cols=246 Identities=17% Similarity=0.222 Sum_probs=171.0
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcE-----EEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCC
Q psy951 1 MFWAETGASPRIESAWMDGSHRR-----SLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDK 75 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~-----~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~ 75 (428)
|||++.+ +|.+.++||+..+ .++......|.|+++|+.++ +|||+|...++|.+++++|...+.++.. .
T Consensus 4 l~~~~~~---~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~-~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~ 77 (267)
T 1npe_A 4 LLFAQTG---KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDK-VVYWTDISEPSIGRASLHGGEPTTIIRQ--D 77 (267)
T ss_dssp EEEEEEE---EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTT-EEEEEETTTTEEEEEESSSCCCEEEECT--T
T ss_pred EEEEcCC---eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCC-EEEEEECCCCEEEEEecCCCCcEEEEEC--C
Confidence 5788753 7999999998642 34443356899999999888 9999999999999999999987777765 4
Q ss_pred ccceeeeecc--ccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccccc--cccCCCCCCCCCCCCCCCccccC
Q psy951 76 LQHPISLDVF--ENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAYHA--QRYNTSAPNPCSQSPCSHLCLVI 151 (428)
Q Consensus 76 ~~~p~~l~~~--~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~~--~~~~~~~~n~C~~~~C~~~C~~~ 151 (428)
+..|.+|++. +++|||+|...++|.+++.+|.....++..++..|.+|++... ..|...
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~----------------- 140 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTD----------------- 140 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEE-----------------
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEE-----------------
Confidence 6788887775 6899999999999999999876555544444455655554321 111110
Q ss_pred CCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCCCCCCCCch
Q psy951 152 PGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGIGQGLTLG 231 (428)
Q Consensus 152 ~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~~~~~~~~ 231 (428)
.+. + .+
T Consensus 141 ---------~~~-----------------------------~--------~~---------------------------- 146 (267)
T 1npe_A 141 ---------WNR-----------------------------D--------NP---------------------------- 146 (267)
T ss_dssp ---------CCS-----------------------------S--------SC----------------------------
T ss_pred ---------CCC-----------------------------C--------Cc----------------------------
Confidence 000 0 00
Q ss_pred hhHHHHHHHHHHHHHHHHHhhheeecCCCCCCCCCCCCCCceEeecCCeEEecCCCcCCCCCCceeeeecCCcceeeeec
Q psy951 232 RSLLYIPTLLLLLALVSATVYYVWRKRPFGKTMGSALSTQSVSFRQGTNVEFGAPAFNNGASLGLTIVYSNGPEIRAYET 311 (428)
Q Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~ 311 (428)
.+..++.
T Consensus 147 -------------------------------------------------------------------------~I~~~~~ 153 (267)
T 1npe_A 147 -------------------------------------------------------------------------KIETSHM 153 (267)
T ss_dssp -------------------------------------------------------------------------EEEEEET
T ss_pred -------------------------------------------------------------------------EEEEEec
Confidence 0000000
Q ss_pred Cccceeecc-ccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCC
Q psy951 312 HKRRFRDVI-SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYD 390 (428)
Q Consensus 312 ~~~~~~~~i-~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~ 390 (428)
+......+. ..+..|.+|++|+..++|||+|...++|.+..++| .....++..+..|.||++| .++|||+|.+.
T Consensus 154 dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g---~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~ 228 (267)
T 1npe_A 154 DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ---PGRRKVLEGLQYPFAVTSY--GKNLYYTDWKT 228 (267)
T ss_dssp TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE---EEEEEEEECCCSEEEEEEE--TTEEEEEETTT
T ss_pred CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC---CceEEEecCCCCceEEEEe--CCEEEEEECCC
Confidence 000000011 24567999999999999999999999999999998 3455556678899999999 79999999999
Q ss_pred CcEEEEEcc-CcceeEEEecccCCCCCCCccccccc
Q psy951 391 RNIRRSFML-EAQKGQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 391 ~~I~~~~~~-g~~~~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
.+|.+.+.+ |+..+++-.+. ...|.+|++.-
T Consensus 229 ~~v~~~d~~~g~~~~~i~~g~----~~~p~gi~~~~ 260 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTFHPHK----QTRLYGITIAL 260 (267)
T ss_dssp TEEEEEETTTTEEEEEECCSS----CCCCCCEEEEC
T ss_pred CeEEEEeCCCCCceEEEcccc----ccccceeeecC
Confidence 999999997 44444443221 22466776643
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.73 E-value=1.1e-15 Score=143.54 Aligned_cols=121 Identities=22% Similarity=0.501 Sum_probs=97.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
|||+|.+.. +|.+.+++|...+.++...+..|+||++|+.++ +|||+|...++|.+++++|+.++++... .+..|.
T Consensus 50 ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~-~lyv~d~~~~~I~~~~~~g~~~~~~~~~--~~~~P~ 125 (267)
T 1npe_A 50 VYWTDISEP-SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGR-TIFWTDSQLDRIEVAKMDGTQRRVLFDT--GLVNPR 125 (267)
T ss_dssp EEEEETTTT-EEEEEESSSCCCEEEECTTCCCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEE
T ss_pred EEEEECCCC-EEEEEecCCCCcEEEEECCCCCccEEEEEecCC-eEEEEECCCCEEEEEEcCCCCEEEEEEC--CCCCcc
Confidence 699998776 899999999988877777788999999999888 8999999999999999999988888765 467788
Q ss_pred eeecc--ccEEEEEeCC--CCceeeeccCCCCceeeeccCCCCCccccc
Q psy951 81 SLDVF--ENNIYWLARD--TGSLYKQDKFGRGVPVLISKDLVNPSGVKA 125 (428)
Q Consensus 81 ~l~~~--~~~lYwtD~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v 125 (428)
+|++. +++|||+|+. +++|++.+.+|.....+....+..|.+|++
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~ 174 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTF 174 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEE
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEE
Confidence 77765 7899999986 678999998876544443333444555444
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.67 E-value=1.9e-15 Score=145.10 Aligned_cols=98 Identities=7% Similarity=0.224 Sum_probs=78.8
Q ss_pred CEEEee--CCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccc
Q psy951 1 MFWAET--GASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQH 78 (428)
Q Consensus 1 lyWtd~--~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~ 78 (428)
|||+|. ...+.|.+.++||+.++.|..... +++|+..+ .|||++.+..+|++++++|+.+++|..+ ....
T Consensus 118 Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~-~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~~ 189 (302)
T 3s25_A 118 IYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FTCNTSDR-YFYYNNPKNGQLYRYDTASQSEALFYDC--NCYK 189 (302)
T ss_dssp EEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CCSEEETT-EEEEECTTTCCEEEEETTTTEEEEEECS--CEEE
T ss_pred EEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eEeeEECC-EEEEEeCCCceEEEEECCCCCEEEEeCC--Cccc
Confidence 699993 334589999999999998877544 45788888 9999999889999999999999988765 3444
Q ss_pred eeeeeccccEEEEEeCCC-CceeeeccCCCC
Q psy951 79 PISLDVFENNIYWLARDT-GSLYKQDKFGRG 108 (428)
Q Consensus 79 p~~l~~~~~~lYwtD~~~-~~I~~~~~~g~~ 108 (428)
| +...+++|||+++.. ..|++++++|+.
T Consensus 190 ~--~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 190 P--VVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp E--EEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred e--eeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 4 346799999999864 578888888654
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.62 E-value=6.2e-14 Score=134.52 Aligned_cols=104 Identities=19% Similarity=0.321 Sum_probs=79.9
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCC-------------CeEEEEEcCCCCeE
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKL-------------NTIESVRHDGRNRQ 67 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~-------------~~I~~~~ldG~~~~ 67 (428)
||+.+.....+|.+.+.||++.+.|-.. .+.-|.+| .+ .||+++... ..|.++++||+.++
T Consensus 28 iy~~n~~d~~~ly~~~~dg~~~~~l~~~---~~~~i~~~--g~-~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~ 101 (302)
T 3s25_A 28 VFFSNTNDNGRLYAMNIDGSNIHKLSND---TAMYINAD--KN-YVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST 101 (302)
T ss_dssp EEEEEGGGTTEEEEEETTSCSCEEEEEE---EEEEEEEC--SS-EEEEEEECC------CCSSCCSEEEEEEETTSCCCE
T ss_pred EEEEeCCCCceEEEEcCCCCCCEEccCC---ceeeEEEc--CC-EEEEEECCCCcccccceeccCCCeEEEEeCCCCcce
Confidence 4677655556999999999998877553 36777776 56 999997653 58999999999988
Q ss_pred EEEeCCCCccceeeeeccccEEEEEe---CCCCceeeeccCCCCceeeecc
Q psy951 68 TILSGSDKLQHPISLDVFENNIYWLA---RDTGSLYKQDKFGRGVPVLISK 115 (428)
Q Consensus 68 ~i~~~~~~~~~p~~l~~~~~~lYwtD---~~~~~I~~~~~~g~~~~~~~~~ 115 (428)
.|... ... .+++.+++|||+| .....|++++.+|+..+.+...
T Consensus 102 ~l~~~---~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~ 147 (302)
T 3s25_A 102 VLDPD---PCI--YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH 147 (302)
T ss_dssp EEECS---CEE--EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS
T ss_pred EeecC---Ccc--EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC
Confidence 87765 222 5677999999999 4567899999998776555443
No 23
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=7.2e-11 Score=118.02 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=59.8
Q ss_pred CCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEEEEEeCCCC-ceeeeccCCC
Q psy951 29 GVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNIYWLARDTG-SLYKQDKFGR 107 (428)
Q Consensus 29 ~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~-~I~~~~~~g~ 107 (428)
.+..|.+|++|. .+ +|||+|...++|.++++++.....+.... ..++ ++++..++.|||+|.... .|++.+..++
T Consensus 129 ~~~~P~~la~d~-~g-~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NN-TVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCCCEEEEEECS-TT-EEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred ccCCceEEEEeC-CC-CEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 377999999994 46 79999999999999999987777776652 3444 667777889999998665 8888887644
No 24
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=8.5e-11 Score=118.29 Aligned_cols=101 Identities=7% Similarity=0.115 Sum_probs=79.0
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCC----eEEEEEcCCCCe--EEEEeCCC
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLN----TIESVRHDGRNR--QTILSGSD 74 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~----~I~~~~ldG~~~--~~i~~~~~ 74 (428)
||++|.+ .+|.+.++++...+.+.. ....|.+|++|...+ +||++|...+ .+.....+|... +.+..
T Consensus 152 Lyv~d~~--~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~-~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~--- 224 (430)
T 3tc9_A 152 LYLVGEQ--HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEAD-SMIITNDQNNNDRPNNYILTRESGFKVITELTK--- 224 (430)
T ss_dssp EEEEEBT--EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSS-EEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE---
T ss_pred EEEEeCC--CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCC-EEEEEeCCCCcccceEEEEeCCCceeeeeeecc---
Confidence 6899987 489999999877666655 678999999998877 8999998543 566677788665 34432
Q ss_pred Cccceeeeecc--ccEEEEEeCCCCceeeeccCCCCc
Q psy951 75 KLQHPISLDVF--ENNIYWLARDTGSLYKQDKFGRGV 109 (428)
Q Consensus 75 ~~~~p~~l~~~--~~~lYwtD~~~~~I~~~~~~g~~~ 109 (428)
+.+|.++++. +++||++|+.+++|++.+.++...
T Consensus 225 -~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 225 -GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp -CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred -CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 5667776664 689999999999999999986543
No 25
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=1.5e-10 Score=116.41 Aligned_cols=103 Identities=14% Similarity=-0.004 Sum_probs=74.1
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCC--ceEEEEe---------------ccccce-eeeeec------
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG--QVQAVIS---------------DERRIE-ALDIDP------ 378 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~--~~~~i~~---------------~~~~p~-glavD~------ 378 (428)
...|.+|++||..++|||+|...++|.+...++.... ...++.. .+..|. |+++|-
T Consensus 269 ~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 269 SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 3568999999999999999999999999998873110 1222221 267899 999973
Q ss_pred -cCCeEEEEeCCCCcEEEEEccCcceeEEEec------------ccCCCCCCCccccccc
Q psy951 379 -VDEIIYWVDSYDRNIRRSFMLEAQKGQVQAG------------ASRHQNGVPASSQRNL 425 (428)
Q Consensus 379 -~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~------------~~~~~~~~p~~~~~~~ 425 (428)
..++||++|.+..+|.+.+.+|......-.+ .....+..|++||++-
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 408 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE 408 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC
Confidence 3579999999999999999888544333221 0112256899999874
No 26
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.29 E-value=6.6e-10 Score=111.84 Aligned_cols=98 Identities=10% Similarity=-0.040 Sum_probs=70.7
Q ss_pred eeEEeeccCCCEEEEEecCCCeEEEeeeccccCC--ceEEEEe---------------ccccceeeee--------eccC
Q psy951 326 IEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG--QVQAVIS---------------DERRIEALDI--------DPVD 380 (428)
Q Consensus 326 ~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~--~~~~i~~---------------~~~~p~glav--------D~~~ 380 (428)
+.+|++|+..++||++|...++|.|..+++.... ...++.. .+..|.|||+ |-..
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~ 354 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE 354 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC
Confidence 4479999999999999999999999998853111 1122221 3678999999 3356
Q ss_pred CeEEEEeCCCCcEEEEEccCcceeEEEeccc-------------CCCCCCCcccccc
Q psy951 381 EIIYWVDSYDRNIRRSFMLEAQKGQVQAGAS-------------RHQNGVPASSQRN 424 (428)
Q Consensus 381 ~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~-------------~~~~~~p~~~~~~ 424 (428)
++||++|.+..+|.+.+.+|... ++.-.+. ...+..|.+||++
T Consensus 355 g~lyvaD~~n~~I~~~~~~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd 410 (433)
T 4hw6_A 355 YDFYFCDRDSHTVRVLTPEGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYD 410 (433)
T ss_dssp EEEEEEETTTTEEEEECTTSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEE
T ss_pred CcEEEEECCCCEEEEECCCCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEE
Confidence 89999999999999999988433 3332111 2235679999987
No 27
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=2.2e-09 Score=107.12 Aligned_cols=103 Identities=8% Similarity=0.007 Sum_probs=76.6
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCC-eEEEEEcCCCCeEEEE-eCC-CCcc
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLN-TIESVRHDGRNRQTIL-SGS-DKLQ 77 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~-~I~~~~ldG~~~~~i~-~~~-~~~~ 77 (428)
|||+|.+.. +|.+.++++.....+... ...|. +++|+..+ .|||++...+ .|.+.+.++......+ ... ....
T Consensus 144 lyv~d~~~~-~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~ 219 (409)
T 3hrp_A 144 VLAYQRDDP-RVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSG 219 (409)
T ss_dssp EEEEETTTT-EEEEEETTTTEEEEEEET-CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCS
T ss_pred EEEEecCCC-cEEEEECCCCEEEEeecc-CCCCc-eeEecCCC-cEEEEecCCCceEEEEEcCCCceeEEeeeccchhcC
Confidence 699998665 899999998776666653 56788 99999988 9999998665 9999999877653333 110 0245
Q ss_pred ceeeeecc--ccEEEEEeCCCCceeeeccCCCC
Q psy951 78 HPISLDVF--ENNIYWLARDTGSLYKQDKFGRG 108 (428)
Q Consensus 78 ~p~~l~~~--~~~lYwtD~~~~~I~~~~~~g~~ 108 (428)
.|.++++. +++||++|. +++|++.+..+..
T Consensus 220 ~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 220 KIGAVALDETEEWLYFVDS-NKNFGRFNVKTQE 251 (409)
T ss_dssp CCCBCEECTTSSEEEEECT-TCEEEEEETTTCC
T ss_pred CcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCC
Confidence 56666654 689999886 6789999887543
No 28
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.25 E-value=5.8e-10 Score=112.23 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=71.7
Q ss_pred CEEEeeCC---CCeEEEEEcCCCCc-EEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcC-CCCeEEEEeCCCC
Q psy951 1 MFWAETGA---SPRIESAWMDGSHR-RSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHD-GRNRQTILSGSDK 75 (428)
Q Consensus 1 lyWtd~~~---~~~I~~a~~DG~~~-~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ld-G~~~~~i~~~~~~ 75 (428)
||++|.+. ...|.+...++... ...+. .+..|.|+++|+..+ +|||+|...++|.+++.+ |.-...+.... .
T Consensus 195 lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G-~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-~ 271 (433)
T 4hw6_A 195 MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNG-KIYYTRYHHAMISSYDPATGTLTEEEVMMD-T 271 (433)
T ss_dssp EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTC-CEEECBTTCSEEEEECTTTCCEEEEEEECS-C
T ss_pred EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCC-eEEEEECCCCEEEEEECCCCeEEEEEeccC-C
Confidence 57888743 12355555555443 12222 478999999999778 899999999999999998 55424444321 2
Q ss_pred ccce--eeeeccccEEEEEeCCCCceeeeccCC
Q psy951 76 LQHP--ISLDVFENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 76 ~~~p--~~l~~~~~~lYwtD~~~~~I~~~~~~g 106 (428)
...+ ++++..+++||++|..+++|++.+.++
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 3334 555556778999999999999988774
No 29
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=1.7e-09 Score=100.13 Aligned_cols=98 Identities=22% Similarity=0.303 Sum_probs=68.7
Q ss_pred CEE-EeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccce
Q psy951 1 MFW-AETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHP 79 (428)
Q Consensus 1 lyW-td~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p 79 (428)
||+ ++.... +|.+.+.++.....+.......|.+|++|.. + +||+++. .+.|.+.+.+|.....+... ....|
T Consensus 37 l~v~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g-~l~v~~~-~~~i~~~d~~~~~~~~~~~~--~~~~p 110 (270)
T 1rwi_B 37 VYVTSEGMYG-RVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-G-TVYVTDF-NNRVVTLAAGSNNQTVLPFD--GLNYP 110 (270)
T ss_dssp EEEEECSSSC-EEEEECC-----EECCCCSCCSCCCEEECTT-C-CEEEEET-TTEEEEECTTCSCCEECCCC--SCSSE
T ss_pred EEEEccCCCC-cEEEecCCCcccceEeeCCcCCcceeEECCC-C-CEEEEcC-CCEEEEEeCCCceEeeeecC--CcCCC
Confidence 356 555444 7888877665544433345678999999974 5 6999998 88999999998766544333 45678
Q ss_pred eeeecc-ccEEEEEeCCCCceeeecc
Q psy951 80 ISLDVF-ENNIYWLARDTGSLYKQDK 104 (428)
Q Consensus 80 ~~l~~~-~~~lYwtD~~~~~I~~~~~ 104 (428)
.+|++. +++||+++...+.|.+.+.
T Consensus 111 ~~i~~~~~g~l~v~~~~~~~i~~~~~ 136 (270)
T 1rwi_B 111 EGLAVDTQGAVYVADRGNNRVVKLAA 136 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred cceEECCCCCEEEEECCCCEEEEEEC
Confidence 888876 6789999988888888753
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.08 E-value=4.9e-08 Score=91.24 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=71.4
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
||+++.+.. +|.+.+.+|+.....+......|.+|++|.. + .||+++...+.|.+.+.+|..++..... ....|.
T Consensus 33 l~v~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-g-~l~v~~~~~~~v~~~d~~g~~~~~~~~~--~~~~~~ 107 (300)
T 2qc5_A 33 VWFTQHKAN-KISSLDQSGRIKEFEVPTPDAKVMCLIVSSL-G-DIWFTENGANKIGKLSKKGGFTEYPLPQ--PDSGPY 107 (300)
T ss_dssp EEEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECTT-S-CEEEEETTTTEEEEECTTSCEEEEECSS--TTCCEE
T ss_pred EEEEcCCCC-eEEEECCCCceEEEECCCCCCcceeEEECCC-C-CEEEEecCCCeEEEECCCCCeEEecCCC--CCCCCc
Confidence 355554443 7888888855443223334578999999954 5 6999998889999999996644333332 346788
Q ss_pred eeecc-ccEEEEEeCCCCceeeeccC
Q psy951 81 SLDVF-ENNIYWLARDTGSLYKQDKF 105 (428)
Q Consensus 81 ~l~~~-~~~lYwtD~~~~~I~~~~~~ 105 (428)
+|++. ++.||+++...+.|.+.+.+
T Consensus 108 ~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 108 GITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp EEEECSTTCEEEEETTTTEEEEECTT
T ss_pred cceECCCCCEEEEccCCCeEEEECCC
Confidence 88876 67899999877889888876
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.04 E-value=1.3e-08 Score=94.25 Aligned_cols=93 Identities=8% Similarity=0.084 Sum_probs=70.8
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEE-eccccceeeeeeccCCeEEEEeCCCCcEEEEEccCc
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVI-SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEA 401 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~-~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~ 401 (428)
+..|.+|++|+.. .||+++....+|.+...++ ....... ..+..|.+|++|..+ +||+++.+...|.+.+.+|.
T Consensus 149 ~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~---~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 149 LNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAES---NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CCSCCCEEECTTC-CEEEEEGGGTEEEEECTTT---CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCS
T ss_pred CCCceeEEEeCCC-CEEEEECCCCEEEEEecCC---CceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCC
Confidence 4568899999854 5999999888999998877 2222222 367889999999875 99999998889999999887
Q ss_pred ceeEEEecccCCCCCCCcccccc
Q psy951 402 QKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 402 ~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
....+. ..+...|.+|+++
T Consensus 224 ~~~~~~----~~~~~~p~~i~~~ 242 (270)
T 1rwi_B 224 TSTVLP----FTGLNTPLAVAVD 242 (270)
T ss_dssp CCEECC----CCSCSCEEEEEEC
T ss_pred cceeec----cCCCCCceeEEEC
Confidence 655432 2335678888775
No 32
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.03 E-value=7.7e-08 Score=92.55 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=70.9
Q ss_pred eEEEEEcC-CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCC--eEEEEeC------CCCccceee
Q psy951 11 RIESAWMD-GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRN--RQTILSG------SDKLQHPIS 81 (428)
Q Consensus 11 ~I~~a~~D-G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~--~~~i~~~------~~~~~~p~~ 81 (428)
+|.+.+.+ |+-.+.+-...+..|.||++|+. + +||++|...++|.+.+.+|.. ...+... ...+..|.+
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~-g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTD-G-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTT-S-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCC-C-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 58888876 65544332345679999999964 5 699999999999999999983 3444320 125668988
Q ss_pred eecc--ccEEEEEeC-CCCceeeeccCCC
Q psy951 82 LDVF--ENNIYWLAR-DTGSLYKQDKFGR 107 (428)
Q Consensus 82 l~~~--~~~lYwtD~-~~~~I~~~~~~g~ 107 (428)
|++. ++.||++|. .+++|.+.+.+|.
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 8886 689999995 7889999987754
No 33
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.98 E-value=4.3e-10 Score=85.89 Aligned_cols=72 Identities=28% Similarity=0.648 Sum_probs=57.2
Q ss_pred CCCCCCC-CCCCC-ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCC
Q psy951 135 APNPCSQ-SPCSH-LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQD 212 (428)
Q Consensus 135 ~~n~C~~-~~C~~-~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g 212 (428)
.+++|.. ++|.+ .|++.+++|+|.|++|| .+ .|..|.+++++.... +|.| ++|++.. |+|.|.|++|
T Consensus 4 dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy-~~----~g~~C~dideC~~~~----~C~~-~~C~n~~-g~y~C~C~~G 72 (82)
T 1emn_A 4 DMDECKEPDVCKHGQCINTDGSYRCECPFGY-IL----AGNECVDTDECSVGN----PCGN-GTCKNVI-GGFECTCEEG 72 (82)
T ss_dssp CCCSSSSTTSCSSSEECCCSSCCCEECCTTE-EE----ETTEEEECCGGGTCC----TTSS-SCEEECS-SSEEECCSSS
T ss_pred ccccCCCCCCcCCCEEEecCCCEEEECCCCe-EC----CCCccCCcccccCCC----CCCC-CEeECCC-CCEEeECCCC
Confidence 5688986 78987 99999999999999999 32 268898776653222 5777 5999987 6799999999
Q ss_pred CccCc
Q psy951 213 FAGTF 217 (428)
Q Consensus 213 y~G~~ 217 (428)
|.|..
T Consensus 73 ~~g~~ 77 (82)
T 1emn_A 73 FEPGP 77 (82)
T ss_dssp SCCCS
T ss_pred eEeCC
Confidence 99753
No 34
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=1.5e-07 Score=95.53 Aligned_cols=99 Identities=9% Similarity=0.155 Sum_probs=73.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeC---CCCCceeEEE-------cCCCCCEEEEEECCCC------eEEEEEcC--
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMT---GVRHPTGLSV-------DAAMDHTLYWVDSKLN------TIESVRHD-- 62 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~---~~~~P~glav-------D~~~~~~lYW~d~~~~------~I~~~~ld-- 62 (428)
||.+++... +|.+.++++....+++.. .+..|.+|++ |...+ +||.+|...+ .|..+..+
T Consensus 154 Lyv~~~~~~-~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~-~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 154 LYICYDGHK-AIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE-YMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEETEE-EEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC-EEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred EEEEECCCC-eEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCC-EEEEEeCCCCCcccCceEEEEecCCC
Confidence 577887654 699999998888888764 3557999999 98877 8999998762 36666433
Q ss_pred CCCe-----EEEEeCCCCccceeeeecc--ccEEEEEeCCCCceeeeccC
Q psy951 63 GRNR-----QTILSGSDKLQHPISLDVF--ENNIYWLARDTGSLYKQDKF 105 (428)
Q Consensus 63 G~~~-----~~i~~~~~~~~~p~~l~~~--~~~lYwtD~~~~~I~~~~~~ 105 (428)
|.-. +++.. ..+|.++++. +++||++|+..+.|++.+.+
T Consensus 232 G~~~~~~~~~~v~~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 232 GTFDDRSDIQLIAA----YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp SCCSTTSCEEEEEE----ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred Cceeecccceeecc----CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 3432 34432 4577777665 58999999999999999986
No 35
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.97 E-value=5.6e-10 Score=93.82 Aligned_cols=77 Identities=25% Similarity=0.691 Sum_probs=62.4
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCC
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQD 212 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g 212 (428)
.+++|..++|.+ .|++.+++|+|.|++|| .|..|+...+.+... +|.++|+|++.. +.|+|.|++|
T Consensus 44 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~-------~G~~C~~~~~~C~~~----~C~~~g~C~~~~-g~~~C~C~~G 111 (135)
T 2vj3_A 44 DVNECVSNPCQNDATCLDQIGEFQCICMPGY-------EGVHCEVNTDECASS----PCLHNGRCLDKI-NEFQCECPTG 111 (135)
T ss_dssp ECCTTTTCCCCSSCEEEECSSCEEEECCTTE-------ESSSSCEECCTTTTC----CSTTTCEEEECS-SCEEEECCTT
T ss_pred cCccCCCCCCCCCCEEeCCCCCceeeCCCCC-------cCCcceecCCcccCC----CcCCCCEeECCC-CCeEEECCCC
Confidence 467888888876 89999999999999999 578887443333322 788999999887 6799999999
Q ss_pred CccCccCCCCC
Q psy951 213 FAGTFCENYTG 223 (428)
Q Consensus 213 y~G~~Ce~~~~ 223 (428)
|+|..|+....
T Consensus 112 ~~G~~C~~~i~ 122 (135)
T 2vj3_A 112 FTGHLCQVDLH 122 (135)
T ss_dssp EESSSSCEECC
T ss_pred CcCCccCccCc
Confidence 99999986543
No 36
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.95 E-value=9.1e-10 Score=92.51 Aligned_cols=76 Identities=30% Similarity=0.767 Sum_probs=61.9
Q ss_pred CCCCCC--CCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCC
Q psy951 135 APNPCS--QSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCR 210 (428)
Q Consensus 135 ~~n~C~--~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~ 210 (428)
.+++|. .++|.+ .|++..++|+|.|++|| .|..|+.....+.. .+|.++++|++.. |.|.|.|+
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy-------~G~~C~~~~~~C~~----~~C~~~~~C~~~~-g~~~C~C~ 71 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGY-------TGPRCEIDVNECVS----NPCQNDATCLDQI-GEFQCICM 71 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTE-------ESTTSCEECCTTTT----CCCCSSCEEEECS-SCEEEECC
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCC-------cCCcccccCccCCC----CCCCCCCEEeCCC-CCceeeCC
Confidence 568898 578987 89999999999999999 67888643333332 2788999999987 67999999
Q ss_pred CCCccCccCCCC
Q psy951 211 QDFAGTFCENYT 222 (428)
Q Consensus 211 ~gy~G~~Ce~~~ 222 (428)
+||+|..|+...
T Consensus 72 ~G~~G~~C~~~~ 83 (135)
T 2vj3_A 72 PGYEGVHCEVNT 83 (135)
T ss_dssp TTEESSSSCEEC
T ss_pred CCCcCCcceecC
Confidence 999999998543
No 37
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.94 E-value=3.9e-10 Score=86.97 Aligned_cols=75 Identities=27% Similarity=0.622 Sum_probs=57.5
Q ss_pred CCCCCCCCC--CCC-ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCC
Q psy951 135 APNPCSQSP--CSH-LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQ 211 (428)
Q Consensus 135 ~~n~C~~~~--C~~-~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~ 211 (428)
.+|+|..++ |.+ .|++.+++|+|.|++|| .+... .+..|++++++. ..++.|. +++|++.. |+|+|.|++
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy-~~~~~-~g~~C~dideC~---~~~~~C~-~~~C~n~~-g~y~C~C~~ 74 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGY-ESGFM-MMKNCMDIDECQ---RDPLLCR-GGVCHNTE-GSYRCECPP 74 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSE-EECTT-TSSSEEECCHHH---HCSSTTT-TSEEEEET-TEEEEESCT
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCc-CccCC-CCCccCCccccc---CCCCcCC-CCEeEcCC-CCEEEECcC
Confidence 468898765 987 99999999999999999 44322 368898766532 1234575 47999987 789999999
Q ss_pred CCccC
Q psy951 212 DFAGT 216 (428)
Q Consensus 212 gy~G~ 216 (428)
||.+.
T Consensus 75 G~~~~ 79 (86)
T 1lmj_A 75 GHQLS 79 (86)
T ss_dssp TSCCC
T ss_pred CcccC
Confidence 99974
No 38
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=1.5e-07 Score=95.53 Aligned_cols=101 Identities=10% Similarity=-0.014 Sum_probs=74.3
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCc---eEEEEe---------------ccccce-eeeeec-----
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQ---VQAVIS---------------DERRIE-ALDIDP----- 378 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~---~~~i~~---------------~~~~p~-glavD~----- 378 (428)
...|.+|++||..++||.+|...++|+|...++.. .. ..+++- .|..|. |+++|-
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~-~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~ 387 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIK-KEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTG 387 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCS
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCc-ceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccc
Confidence 34678999999999999999999999999998831 11 122321 356899 899973
Q ss_pred -cCCeEEEEeCCCCcEEEEEccCcceeEEEeccc-------------------CCCCCCCccccccc
Q psy951 379 -VDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGAS-------------------RHQNGVPASSQRNL 425 (428)
Q Consensus 379 -~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~~~-------------------~~~~~~p~~~~~~~ 425 (428)
..++||.+|.+..+|.+.+.+|.- .++.-.+. ...+..|.+||++-
T Consensus 388 ~~~g~lyVaD~~N~rIr~i~~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 388 EEEYDFYFVDRLNFCVRKVTPEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred cCCCeEEEEECCCCEEEEEeCCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 568999999999999999998843 33432211 12357788998874
No 39
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=93.01 Aligned_cols=78 Identities=29% Similarity=0.786 Sum_probs=61.1
Q ss_pred CCCCCCCCCCCC--ccc-------cCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCce
Q psy951 135 APNPCSQSPCSH--LCL-------VIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDL 205 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~-------~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~ 205 (428)
..++|..++|.+ .|+ +.+++|+|.|++|| .|..|+...+.|... +|.++++|++.. +.|
T Consensus 51 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~-------~G~~C~~~i~~C~~~----~C~~~~~C~~~~-g~~ 118 (143)
T 4d90_A 51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGF-------NGIHCQHNINECEVE----PCKNGGICTDLV-ANY 118 (143)
T ss_dssp CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTE-------ESTTSCEECCTTTTC----CSCTTCEEEEET-TEE
T ss_pred cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCC-------cCCCcccCCCcCCCC----CCCCCCEeECCC-CCe
Confidence 468898888987 898 56679999999999 678997333333322 688999999886 689
Q ss_pred EecCCCCCccCccCCCCCC
Q psy951 206 TCNCRQDFAGTFCENYTGI 224 (428)
Q Consensus 206 ~C~C~~gy~G~~Ce~~~~~ 224 (428)
+|.|++||+|+.|+.....
T Consensus 119 ~C~C~~G~~G~~c~~~~~~ 137 (143)
T 4d90_A 119 SCECPGEFMGRNCQYKGGG 137 (143)
T ss_dssp EEECCTTCBSTTSCBC---
T ss_pred EeECCCCCccCCceecCCE
Confidence 9999999999999886543
No 40
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.86 E-value=2.9e-07 Score=88.50 Aligned_cols=79 Identities=10% Similarity=0.018 Sum_probs=64.4
Q ss_pred ceeEEeeccCCCEEEEEec-CCCeEEEeeeccccCCceEEEEe----------ccccceeeeeeccCCeEEEEeCCCCcE
Q psy951 325 RIEALDIDPVDEIIYWVDS-YDRNIRRSFMLEAQKGQVQAVIS----------DERRIEALDIDPVDEIIYWVDSYDRNI 393 (428)
Q Consensus 325 ~~~~l~~d~~~~~lyWtd~-~~~~I~ra~l~g~~~~~~~~i~~----------~~~~p~glavD~~~~~lYwtd~~~~~I 393 (428)
.|.+|++|+.++.||++|. ...+|.+...+| .....+-. .+..|.|||+|..+++||++|.+..+|
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTTS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 5779999999999999997 688999988777 22222211 356699999999889999999999999
Q ss_pred EEEEcc-CcceeEE
Q psy951 394 RRSFML-EAQKGQV 406 (428)
Q Consensus 394 ~~~~~~-g~~~~~l 406 (428)
.+.+.+ |+..+++
T Consensus 221 ~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 221 QCFKTDTKEFVREI 234 (329)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 999998 7766655
No 41
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.84 E-value=8.1e-07 Score=84.54 Aligned_cols=92 Identities=9% Similarity=0.065 Sum_probs=66.1
Q ss_pred eeEEeeccCCCEEEEEecCCCeEEEeeeccc-cCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEccCccee
Q psy951 326 IEALDIDPVDEIIYWVDSYDRNIRRSFMLEA-QKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG 404 (428)
Q Consensus 326 ~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~-~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~ 404 (428)
|.+| ++..++||++|...++|.+..+++. .....+++ ..+..|.||++|..+ +||.++.+...|.+.+.+|+...
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~~~~ 246 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRSTTI 246 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCCEEE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCCEEE
Confidence 4466 5667899999999999999999851 11223333 345789999999864 89999999999999998876432
Q ss_pred EEEecccCCCCCCCcccccc
Q psy951 405 QVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 405 ~l~~~~~~~~~~~p~~~~~~ 424 (428)
+ ..+..|...|.++++.
T Consensus 247 -~--~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 247 -I--AQAEQGVIGSTAVAFG 263 (306)
T ss_dssp -E--ECGGGTCTTEEEEEEC
T ss_pred -E--eecccccCCceEEEEe
Confidence 2 1234466778887763
No 42
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.84 E-value=5.5e-07 Score=84.07 Aligned_cols=95 Identities=6% Similarity=-0.056 Sum_probs=70.4
Q ss_pred cccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe--ccccceeeeeeccCCeEEEEeCCCC-cEEEEEc
Q psy951 322 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS--DERRIEALDIDPVDEIIYWVDSYDR-NIRRSFM 398 (428)
Q Consensus 322 ~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~--~~~~p~glavD~~~~~lYwtd~~~~-~I~~~~~ 398 (428)
.+..|.+|++|+. +.||.++....+|.+...+| .....+.. .+..|.+|++|.. ++||.++.+.. .|.+-+.
T Consensus 162 ~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 162 HLEFPNGVVVNDK-QEIFISDNRAHCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp TCSSEEEEEECSS-SEEEEEEGGGTEEEEEETTC---CEEEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEEEECT
T ss_pred ccCCcEEEEECCC-CCEEEEECCCCEEEEEcCCC---CEEEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEEEECC
Confidence 3457899999995 67999999999999988776 22222322 3678999999985 58999999886 8999999
Q ss_pred cCcceeEEEecccCCCCCCCcccccc
Q psy951 399 LEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 399 ~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+|+..+++.. ..+...|.+++++
T Consensus 237 ~g~~~~~~~~---~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 237 DGQLISALES---KVKHAQCFDVALM 259 (286)
T ss_dssp TSCEEEEEEE---SSCCSCEEEEEEE
T ss_pred CCCEEEEEcc---cCCCCcceeEEEC
Confidence 9877666542 2234457777765
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.83 E-value=4.3e-07 Score=87.38 Aligned_cols=101 Identities=8% Similarity=-0.009 Sum_probs=70.4
Q ss_pred EEEeeCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEe-CC--CCcc
Q psy951 2 FWAETGASPRIESAWMD-GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILS-GS--DKLQ 77 (428)
Q Consensus 2 yWtd~~~~~~I~~a~~D-G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~-~~--~~~~ 77 (428)
|.+..+.. +|...+.+ |+....+ . ....|.+|++++. + +||.++...+.|.++++........+. +. ....
T Consensus 57 yv~~~~~~-~v~viD~~t~~~~~~i-~-~~~~p~~i~~~~~-g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 57 WIVVNNSH-VIFAIDINTFKEVGRI-T-GFTSPRYIHFLSD-E-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp EEEEGGGT-EEEEEETTTCCEEEEE-E-CCSSEEEEEEEET-T-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred EEEEcCCC-EEEEEECcccEEEEEc-C-CCCCCcEEEEeCC-C-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 55555433 67777776 4444444 3 4679999999754 6 899999888999999987654432233 21 1123
Q ss_pred ceeeeeccccEEEEEeC-CCCceeeeccCCC
Q psy951 78 HPISLDVFENNIYWLAR-DTGSLYKQDKFGR 107 (428)
Q Consensus 78 ~p~~l~~~~~~lYwtD~-~~~~I~~~~~~g~ 107 (428)
.|.+|++.+++||.+++ ..++|...+....
T Consensus 132 ~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp BCCCEEEETTEEEEEECTTCCEEEEEETTTT
T ss_pred CcceEEEECCEEEEEcCCCCCEEEEEECCCC
Confidence 78888888999999998 4778888887643
No 44
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.82 E-value=1.9e-06 Score=80.26 Aligned_cols=100 Identities=13% Similarity=0.193 Sum_probs=69.2
Q ss_pred EEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccceee
Q psy951 2 FWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPIS 81 (428)
Q Consensus 2 yWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~ 81 (428)
|+++.+. ..|.+.+.+|.............|.+|++|.. + +||+++...+.|.+.+.+|..+...... ....|.+
T Consensus 29 ~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~-g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~--~~~~~~~ 103 (299)
T 2z2n_A 29 WITQHKA-NMISCINLDGKITEYPLPTPDAKVMCLTISSD-G-EVWFTENAANKIGRITKKGIIKEYTLPN--PDSAPYG 103 (299)
T ss_dssp EEEETTT-TEEEEECTTCCEEEEECSSTTCCEEEEEECTT-S-CEEEEETTTTEEEEECTTSCEEEEECSS--TTCCEEE
T ss_pred EEEecCC-CcEEEEcCCCCeEEecCCcccCceeeEEECCC-C-CEEEeCCCCCeEEEECCCCcEEEEeCCC--cCCCcee
Confidence 4444333 36888888854333222234578999999964 5 6999998889999999987643332222 3557888
Q ss_pred eecc-ccEEEEEeCCCCceeeeccCC
Q psy951 82 LDVF-ENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 82 l~~~-~~~lYwtD~~~~~I~~~~~~g 106 (428)
|.+. +++||+++...+.|.+.+.+|
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~~g 129 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITDDG 129 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTC
T ss_pred eEECCCCCEEEEecCCceEEEECCCC
Confidence 8876 578999988778888888743
No 45
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.81 E-value=7.2e-07 Score=85.36 Aligned_cols=86 Identities=6% Similarity=0.041 Sum_probs=64.7
Q ss_pred cccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCC----------
Q psy951 320 ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSY---------- 389 (428)
Q Consensus 320 i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~---------- 389 (428)
...+..|.+|++++..+.||++|...++|.+..+++......+++..... |.||++|..+ +||.++..
T Consensus 181 ~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G-~l~va~~~~~~~~~~~~~ 258 (322)
T 2fp8_A 181 LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADG-HFWVSSSEELDGNMHGRV 258 (322)
T ss_dssp EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTS-CEEEEEEEETTSSTTSCE
T ss_pred ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCC-CEEEEecCcccccccCCC
Confidence 34567889999999999999999999999999998732233444443223 9999999864 69888866
Q ss_pred CCcEEEEEccCcceeEEE
Q psy951 390 DRNIRRSFMLEAQKGQVQ 407 (428)
Q Consensus 390 ~~~I~~~~~~g~~~~~l~ 407 (428)
...|.+.+.+|+..+++-
T Consensus 259 ~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 259 DPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred ccEEEEECCCCCEEEEEE
Confidence 456888888887655543
No 46
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.79 E-value=5.3e-09 Score=81.44 Aligned_cols=62 Identities=32% Similarity=0.624 Sum_probs=47.6
Q ss_pred cccCCCcceecCCCCCCCCCCCCCCcccc-cCccCCCCCCCCCCCCCCCEEeeCC-CCceEecCCCCCccCccCCCC
Q psy951 148 CLVIPGGYQCACPENATPKLPGVAEIRCS-AAVERPRPLPRVCQCQNGGMCAESE-TGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 148 C~~~~~~~~C~C~~g~~~~~~~~~g~~C~-~~~~~~~~~~~~c~C~ngg~C~~~~-~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
|++..++|+|.|++|| . .|+ ...+.|... +|.|||+|++.. .+.|+|.|++||+|.+||...
T Consensus 25 C~n~~~~y~C~C~~G~-------~--~C~~~~~~~C~~~----pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGR-------A--QCHSVPVKSCSEP----RCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp CSSSSCEEEEECSSSC-------C--BCCEECEEECSSC----CSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred cccCCCCcEeECCCCC-------c--ccccCcCCcccCC----CCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence 4566789999999999 2 676 223333332 699999999875 356999999999999999754
No 47
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.79 E-value=4.1e-09 Score=89.26 Aligned_cols=79 Identities=33% Similarity=0.843 Sum_probs=55.2
Q ss_pred CCCCCCCCCC--ccccCC--CcceecCCCCCCCCCCCCCCcccccCccCCCC-----CCCCC---CCCCCCEEeeCC---
Q psy951 137 NPCSQSPCSH--LCLVIP--GGYQCACPENATPKLPGVAEIRCSAAVERPRP-----LPRVC---QCQNGGMCAESE--- 201 (428)
Q Consensus 137 n~C~~~~C~~--~C~~~~--~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~-----~~~~c---~C~ngg~C~~~~--- 201 (428)
++|..++|.+ +|++.. ++|+|.|++|| .|..|+...+.... ...+| +|.|+++|+...
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~-------~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~ 73 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGF-------TDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYR 73 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTC-------CTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEE
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCC-------CCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccc
Confidence 5788889987 999876 67999999999 56888764332110 11233 699999998432
Q ss_pred ---CCceEecCCCCCccCccCCCC
Q psy951 202 ---TGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 202 ---~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
.+.|.|.|++||.|..|+...
T Consensus 74 ~~~~~~~~C~C~~G~~G~~C~~~i 97 (143)
T 4d90_A 74 GDTFIGYVCKCPRGFNGIHCQHNI 97 (143)
T ss_dssp TTEECCEEEECCTTEESTTSCEEC
T ss_pred cCCCCCeEeECcCCCcCCCcccCC
Confidence 257999999999999998443
No 48
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.77 E-value=2.7e-06 Score=79.34 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=75.7
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEe-----CCCCCceeEEEcCCCCCEEEEEECC-CCeEEEEEcCCCCeEEEEeCCC
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVM-----TGVRHPTGLSVDAAMDHTLYWVDSK-LNTIESVRHDGRNRQTILSGSD 74 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~-----~~~~~P~glavD~~~~~~lYW~d~~-~~~I~~~~ldG~~~~~i~~~~~ 74 (428)
||++|.... +|.+.+.+|.....+.. ..+..|.+|+++...+ +||.++.. .+.|.+.+.+|...+.+...
T Consensus 43 l~v~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~~g~~~~~~~~~-- 118 (286)
T 1q7f_A 43 IIVADTNNH-RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQYGQFVRKFGAT-- 118 (286)
T ss_dssp EEEEEGGGT-EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEECTTSCEEEEECTT--
T ss_pred EEEEECCCC-EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEECCCCcEEEEecCc--
Confidence 467776554 79988888876554432 1246899999965667 89999975 78999999888765555333
Q ss_pred Cccceeeeecc-ccEEEEEeCCCCceeeeccCCC
Q psy951 75 KLQHPISLDVF-ENNIYWLARDTGSLYKQDKFGR 107 (428)
Q Consensus 75 ~~~~p~~l~~~-~~~lYwtD~~~~~I~~~~~~g~ 107 (428)
....|.+|++. +++||.++...+.|.+.+.+|.
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence 45678888865 5689999988888988887643
No 49
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.76 E-value=2e-06 Score=81.29 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=70.8
Q ss_pred cccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccC--CceEEEEe---ccccceeeeeeccCCeEEEEeCCCCcEE
Q psy951 320 ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK--GQVQAVIS---DERRIEALDIDPVDEIIYWVDSYDRNIR 394 (428)
Q Consensus 320 i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~--~~~~~i~~---~~~~p~glavD~~~~~lYwtd~~~~~I~ 394 (428)
...+..|.+++++|..+.|||+|...++|.+..++.... ...+++.. ....|.||++|..+ +||.++.+...|.
T Consensus 145 ~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~ 223 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVI 223 (297)
T ss_dssp EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEE
T ss_pred eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEE
Confidence 345667889999999999999999999999998863211 11233332 34689999999874 8999998888899
Q ss_pred EEEcc-CcceeEEEecccCCCCCCCccccc
Q psy951 395 RSFML-EAQKGQVQAGASRHQNGVPASSQR 423 (428)
Q Consensus 395 ~~~~~-g~~~~~l~~~~~~~~~~~p~~~~~ 423 (428)
+.+.+ |+...++- .|...|.+++.
T Consensus 224 ~~d~~tG~~~~~i~-----~p~~~~t~~~f 248 (297)
T 3g4e_A 224 RLDPVTGKRLQTVK-----LPVDKTTSCCF 248 (297)
T ss_dssp EECTTTCCEEEEEE-----CSSSBEEEEEE
T ss_pred EEcCCCceEEEEEE-----CCCCCceEEEE
Confidence 99987 76555442 34445565554
No 50
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.75 E-value=1.7e-09 Score=96.12 Aligned_cols=76 Identities=24% Similarity=0.604 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCc-cCCCCCCCCCCCCCCCEEeeCCCCceEecCCC
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAV-ERPRPLPRVCQCQNGGMCAESETGDLTCNCRQ 211 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~-~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~ 211 (428)
..++|..++|++ .|++..++|.|.|++|| .|..|+... +.|.. .+++|.+ +|++.. |+|.|.|++
T Consensus 41 dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf-------~G~~Ce~~i~deC~~--~~~~C~~--~C~n~~-gsy~C~C~~ 108 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGF-------EGKNCELFTRKLCSL--DNGDCDQ--FCHEEQ-NSVVCSCAR 108 (195)
T ss_dssp -----------------------------------------------CCGGGT--GGGGCSS--EEEEET-TEEEEECCT
T ss_pred CCcccCCCCCCCCCEeECCCCCeeEeCCCCc-------eeccccccccccccC--CCCCCCC--EeECCC-CCeEEECCC
Confidence 678999999998 99999999999999999 578998743 32332 2345665 999887 689999999
Q ss_pred CCc----cCccCCCC
Q psy951 212 DFA----GTFCENYT 222 (428)
Q Consensus 212 gy~----G~~Ce~~~ 222 (428)
||. |..|+...
T Consensus 109 Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 109 GYTLADNGKACIPTG 123 (195)
T ss_dssp TEEECTTSSCEEESS
T ss_pred CceeCCCCCccccCC
Confidence 999 99998754
No 51
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.74 E-value=3.6e-09 Score=90.02 Aligned_cols=75 Identities=19% Similarity=0.577 Sum_probs=58.3
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEE-eeCCCCceEecCCC
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMC-AESETGDLTCNCRQ 211 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C-~~~~~g~~~C~C~~ 211 (428)
.+|+|..++|.+ .|++.+++|.|.|++|| .|..|++.+++ .. .+++|.+ +| ++.. |+|.|.|++
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~-------~G~~C~~~deC-~~--~~~~C~~--~C~~n~~-g~y~C~C~~ 113 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGF-------EGKNCELDATC-NI--KNGRCKQ--FCKTGAD-SKVLCSCTT 113 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSE-------ESTTTCEECCT-TS--GGGSCSS--BCCCCSS-SCCCCBCCT
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCC-------cCCcCCCCccc-cC--CCCCCcC--CCCCCCC-CCEEeEcCC
Confidence 678999999998 99999999999999999 67899877432 22 2345655 89 7666 689999999
Q ss_pred CCc----cCccCCCC
Q psy951 212 DFA----GTFCENYT 222 (428)
Q Consensus 212 gy~----G~~Ce~~~ 222 (428)
||. |..|+...
T Consensus 114 Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 114 GYRLAPDQKSCKPAV 128 (146)
T ss_dssp TEEECTTSSSEEECS
T ss_pred CcEeCCCCCcCCCCC
Confidence 999 88998654
No 52
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.74 E-value=3e-09 Score=90.13 Aligned_cols=79 Identities=24% Similarity=0.639 Sum_probs=63.4
Q ss_pred CCCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCC---EEeeCCCCceEec
Q psy951 134 SAPNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGG---MCAESETGDLTCN 208 (428)
Q Consensus 134 ~~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg---~C~~~~~g~~~C~ 208 (428)
..+++|..++|.+ +|++..++|+|.|++|| .|..|+.....+ ..|+|.|++ +|++..+++|+|.
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~-------~G~~C~~~~~~c----~~c~~~~~~C~~~C~~~~g~~y~C~ 113 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAF-------EGRNCETHKDDQ----LICVNENGGCEQYCSDHTGTKRSCR 113 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTE-------ESTTSCEEGGGC----CSTTTGGGGCSSEEECCTTSCCEEE
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCc-------cCCccccCcccc----ccccCCCCCccCEeECCCCCCEEEE
Confidence 3678999999998 99999999999999999 678998632211 235677777 9998874379999
Q ss_pred CCCCCc----cCccCCCCC
Q psy951 209 CRQDFA----GTFCENYTG 223 (428)
Q Consensus 209 C~~gy~----G~~Ce~~~~ 223 (428)
|++||. |..|+....
T Consensus 114 C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 114 CHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp CCTTEEECTTSSCEEESSS
T ss_pred CCCCceECCCCCCCCCCCc
Confidence 999999 889986544
No 53
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.69 E-value=5.1e-06 Score=77.27 Aligned_cols=101 Identities=16% Similarity=0.254 Sum_probs=72.4
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcccee
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPI 80 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~ 80 (428)
||+++.+.. +|.+.+.+|+............|.+|++|. .+ +||+++...+.|.+.+.+|......... ....|.
T Consensus 75 l~v~~~~~~-~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~--~~~~~~ 149 (300)
T 2qc5_A 75 IWFTENGAN-KIGKLSKKGGFTEYPLPQPDSGPYGITEGL-NG-DIWFTQLNGDRIGKLTADGTIYEYDLPN--KGSYPA 149 (300)
T ss_dssp EEEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECS-TT-CEEEEETTTTEEEEECTTSCEEEEECSS--TTCCEE
T ss_pred EEEEecCCC-eEEEECCCCCeEEecCCCCCCCCccceECC-CC-CEEEEccCCCeEEEECCCCCEEEccCCC--CCCCce
Confidence 356665444 799988886653332222457899999996 45 6999999889999999996544333332 456788
Q ss_pred eeecc-ccEEEEEeCCCCceeeeccCC
Q psy951 81 SLDVF-ENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 81 ~l~~~-~~~lYwtD~~~~~I~~~~~~g 106 (428)
+|.+. .++||+++...+.|.+.+.+|
T Consensus 150 ~i~~d~~g~l~v~~~~~~~i~~~~~~g 176 (300)
T 2qc5_A 150 FITLGSDNALWFTENQNNSIGRITNTG 176 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECTTC
T ss_pred eEEECCCCCEEEEecCCCeEEEECCCC
Confidence 88874 567999998888899888753
No 54
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.67 E-value=1.6e-08 Score=82.23 Aligned_cols=76 Identities=21% Similarity=0.441 Sum_probs=52.5
Q ss_pred CCCCCCCC--------CCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCce
Q psy951 136 PNPCSQSP--------CSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDL 205 (428)
Q Consensus 136 ~n~C~~~~--------C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~ 205 (428)
.++|..++ |.+ +|++..++|+|.|++|| .|..|++..+..++......|.+ +|++.. |.|
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~-------~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~-g~y 75 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGW-------EGRFCQREVSFLNCSLDNGGCTH--YCLEEV-GWR 75 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTE-------ESTTSCEECCSSSSSSGGGGCSS--EEEECS-SSE
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCC-------cCCCcCcCCcCCcCcCCCCCCCC--EeECCC-CCE
Confidence 46777666 766 89999999999999999 67889875431111111112322 999987 679
Q ss_pred EecCCCCCc----cCccCCC
Q psy951 206 TCNCRQDFA----GTFCENY 221 (428)
Q Consensus 206 ~C~C~~gy~----G~~Ce~~ 221 (428)
+|.|++||. |..|+..
T Consensus 76 ~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 76 RCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp EEECCTTEEECTTSSCEEEC
T ss_pred EeECCCCeeECCCCCccCcC
Confidence 999999999 5667653
No 55
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.66 E-value=5.5e-09 Score=87.57 Aligned_cols=76 Identities=24% Similarity=0.604 Sum_probs=27.4
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCc-cCCCCCCCCCCCCCCCEEeeCCCCceEecCCC
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAV-ERPRPLPRVCQCQNGGMCAESETGDLTCNCRQ 211 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~-~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~ 211 (428)
..++|..++|++ +|++..++|.|.|++|| .|..|+... +.|.. .+++|.+ +|++.. |.|.|.|++
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~-------~G~~C~~~i~d~C~~--~~~~C~~--~C~~~~-g~y~C~C~~ 108 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGF-------EGKNCELFTRKLCSL--DNGDCDQ--FCHEEQ-NSVVCSCAR 108 (134)
T ss_dssp -----------------------------------------------CCGGGT--GGGGCSS--EEEEET-TEEEEECCT
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCc-------cCCccccCCCCcccc--CCCCCCC--EeECCC-CCEEEECCC
Confidence 568999999998 99999999999999999 578898743 32322 2335655 999887 689999999
Q ss_pred CCc----cCccCCCC
Q psy951 212 DFA----GTFCENYT 222 (428)
Q Consensus 212 gy~----G~~Ce~~~ 222 (428)
||. |..|+...
T Consensus 109 Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 109 GYTLADNGKACIPTG 123 (134)
T ss_dssp TEEECTTSSCEEESS
T ss_pred CcEECCCCCccCcCC
Confidence 999 89997654
No 56
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.65 E-value=4.4e-09 Score=84.48 Aligned_cols=71 Identities=30% Similarity=0.743 Sum_probs=31.7
Q ss_pred CCCCCCC--CCCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCC
Q psy951 135 APNPCSQ--SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQD 212 (428)
Q Consensus 135 ~~n~C~~--~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g 212 (428)
.+|+|.. .+|++.|++.+++|.|.|++|| .+.+ +..|++++++.. +. +|. ++|++.. |+|.|.|++|
T Consensus 28 d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy-~g~~---g~~C~dideC~~--~~--~C~--~~C~n~~-gsy~C~C~~G 96 (107)
T 2w2n_E 28 GTNECLDNNGGCSYVCNDLKIGYECLCPDGF-QLVA---QRRCEDIDECQD--PD--TCS--QLCVNLE-GGYKCQCEEG 96 (107)
T ss_dssp SCCGGGTGGGGCSSEEECCSBSCEEECCTTC-EEET---TTEEEC-----------------------------------
T ss_pred cCccCcCCCCCCCCEeEeCCCCeEEECCCCc-cccC---CCccccccccCC--CC--CcC--CeeecCC-CCEEEECCCC
Confidence 5688985 4799999999999999999999 3322 378997665432 12 454 6899887 6799999999
Q ss_pred CccC
Q psy951 213 FAGT 216 (428)
Q Consensus 213 y~G~ 216 (428)
|.|.
T Consensus 97 y~~~ 100 (107)
T 2w2n_E 97 FQLD 100 (107)
T ss_dssp ----
T ss_pred ceEC
Confidence 9964
No 57
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.64 E-value=5.6e-08 Score=98.31 Aligned_cols=157 Identities=20% Similarity=0.378 Sum_probs=68.6
Q ss_pred CCceeEEEcCC------CCCEEEEEECCCCeEEEEEcCCCC---eEEEE-eC------CCCccceeeeecc-ccEEEEEe
Q psy951 31 RHPTGLSVDAA------MDHTLYWVDSKLNTIESVRHDGRN---RQTIL-SG------SDKLQHPISLDVF-ENNIYWLA 93 (428)
Q Consensus 31 ~~P~glavD~~------~~~~lYW~d~~~~~I~~~~ldG~~---~~~i~-~~------~~~~~~p~~l~~~-~~~lYwtD 93 (428)
..|.|+++-.. .+ .+|.+|.. ++|.++.+++.. ....+ .+ .....+|.++... .+.||.+|
T Consensus 276 ~Ap~G~~~Y~G~~fP~~~g-~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~ 353 (463)
T 2wg3_C 276 GPLVGGFVYRGCQSERLYG-SYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILS 353 (463)
T ss_dssp -CEEEEEECCCSSCTTTTT-CEEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEE
T ss_pred ccccceEEEeCCCChhhcc-eEEEecCC-CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEe
Confidence 47899999422 23 58899986 789999987543 22232 11 1124578888865 57899999
Q ss_pred C-------CCCceeeeccCCCCceeeeccCCCCCcc-cccccccccCCCCCCCCCCCCCCC-ccccCCCcceecCCCCCC
Q psy951 94 R-------DTGSLYKQDKFGRGVPVLISKDLVNPSG-VKAYHAQRYNTSAPNPCSQSPCSH-LCLVIPGGYQCACPENAT 164 (428)
Q Consensus 94 ~-------~~~~I~~~~~~g~~~~~~~~~~~~~p~~-I~v~~~~~~~~~~~n~C~~~~C~~-~C~~~~~~~~C~C~~g~~ 164 (428)
+ ..++|+|+...... ..|.. ..-+. ...+ ..+.|.. +|+| .|... ++|.|++||
T Consensus 354 ~~~~~~~~~~G~I~Ri~~p~~~---------~~p~~C~~~~~-g~~c--~~~~C~~-~C~nG~C~~~---~~C~C~~G~- 416 (463)
T 2wg3_C 354 SSKSMTQTHNGKLYKIVDPKRP---------LMPEECRATVQ-PAQT--LTSECSR-LCRNGYCTPT---GKCCCSPGW- 416 (463)
T ss_dssp ESSCGGGCSSEEEEEEECTTSC---------SSCGGGCCCCC-CCCC--CCCHHHH-HCCSEEECTT---SCEEECTTE-
T ss_pred ccCCcccCCCCcEEEecCcccc---------cccccCCCCCc-CCCC--ccccccC-CCCCCccCCC---CeECCCCCc-
Confidence 7 45677776532111 00000 00000 0011 1234443 4666 77642 489999999
Q ss_pred CCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCC
Q psy951 165 PKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 165 ~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
.|..|+.. .|. + +|.|+|+|+.. ++|.|++||+|..|+....
T Consensus 417 ------~G~~C~~~--~C~----~-~C~~~g~C~~~----~~C~C~~G~~G~~C~~~~~ 458 (463)
T 2wg3_C 417 ------EGDFCRTA--KCE----P-ACRHGGVCVRP----NKCLCKKGYLGPQCEQVDH 458 (463)
T ss_dssp ------ESTTSCEE--CC-----------------------------------------
T ss_pred ------CCCcCCcC--cCC----C-CCCCCCEECCC----CEEECCCCcccCCCCCCcc
Confidence 67889521 122 1 79999999854 5899999999999998654
No 58
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.63 E-value=9.1e-06 Score=76.92 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=62.6
Q ss_pred CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccceeeeecc-ccEEEEEeCCCC
Q psy951 19 GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPISLDVF-ENNIYWLARDTG 97 (428)
Q Consensus 19 G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~-~~~lYwtD~~~~ 97 (428)
|...+.+ .+...++.|.+.|+..+ .|||+|...+.|.+.+.+|. .+++... ...|.++.+. +++||.++...+
T Consensus 34 ~~~~~~l-~~~~~~~egp~~~~~g~-~l~~~d~~~~~i~~~~~~g~-~~~~~~~---~~~~~gl~~d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 34 DARLLTL-YDQATWSEGPAWWEAQR-TLVWSDLVGRRVLGWREDGT-VDVLLDA---TAFTNGNAVDAQQRLVHCEHGRR 107 (305)
T ss_dssp TCCCEEE-ECCCSSEEEEEEEGGGT-EEEEEETTTTEEEEEETTSC-EEEEEES---CSCEEEEEECTTSCEEEEETTTT
T ss_pred CCceEEE-ecCCcCccCCeEeCCCC-EEEEEECCCCEEEEEeCCCC-EEEEeCC---CCccceeeECCCCCEEEEECCCC
Confidence 4444444 45788999999998887 89999999999999999776 3444333 3456677765 578999988778
Q ss_pred ceeeeccCC
Q psy951 98 SLYKQDKFG 106 (428)
Q Consensus 98 ~I~~~~~~g 106 (428)
.|.+.+.+|
T Consensus 108 ~v~~~~~~g 116 (305)
T 3dr2_A 108 AITRSDADG 116 (305)
T ss_dssp EEEEECTTS
T ss_pred EEEEECCCC
Confidence 899988874
No 59
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.63 E-value=2e-08 Score=77.41 Aligned_cols=75 Identities=28% Similarity=0.626 Sum_probs=55.8
Q ss_pred CCCCCCCCC--CC-CccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCC
Q psy951 135 APNPCSQSP--CS-HLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQ 211 (428)
Q Consensus 135 ~~n~C~~~~--C~-~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~ 211 (428)
.+|+|..++ |. ..|++.+++|+|.|++|| .+.+. +..|++.+++ .. . +|. ++|++.. |+|.|.|+
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~-~~~~~--g~~C~dideC-~~--~--~C~--~~C~n~~-g~y~C~C~- 69 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGY-RYNLK--SKSCEDIDEC-SE--N--MCA--QLCVNYP-GGYTCYCD- 69 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTC-EEETT--TTEEECCCHH-HH--S--CCS--SEECCCS-SSCCEECC-
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCc-eECCC--CCcCCCcCee-CC--C--CCC--CEEEccC-CCEEEECC-
Confidence 468898776 83 399999999999999999 44332 5789876653 21 2 454 6999887 67999998
Q ss_pred CCccCccCCC
Q psy951 212 DFAGTFCENY 221 (428)
Q Consensus 212 gy~G~~Ce~~ 221 (428)
|+.|..|+..
T Consensus 70 g~~G~~~~~~ 79 (87)
T 1z6c_A 70 GKKGFKLAQD 79 (87)
T ss_dssp SSSCCBCCTT
T ss_pred CCcCCcccCC
Confidence 7777776654
No 60
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.59 E-value=2.9e-08 Score=69.02 Aligned_cols=47 Identities=26% Similarity=0.574 Sum_probs=34.1
Q ss_pred cccccCccCCCCCCCCCCCCCCCEEeeC----CCCceEecCCCCCccCccCCCCC
Q psy951 173 IRCSAAVERPRPLPRVCQCQNGGMCAES----ETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 173 ~~C~~~~~~~~~~~~~c~C~ngg~C~~~----~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
..|....+.|... +|+|||+|... ..+.|.|.|++||+|.+||....
T Consensus 2 ~~c~~~~~eC~s~----pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 2 TSHLVKCAEKEKT----FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp -CCEEECCSTTTT----TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCcccCCCCcCC----CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 4565555544444 89999999632 23579999999999999998654
No 61
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.59 E-value=3.1e-05 Score=72.53 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=63.9
Q ss_pred CCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccceeeeecc-ccEEEEEeCCC
Q psy951 18 DGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPISLDVF-ENNIYWLARDT 96 (428)
Q Consensus 18 DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~-~~~lYwtD~~~ 96 (428)
+|...+.+ ......|.|++.|+..+ .|||++...+.|.+.+.++. .+.+.. ....|.+|++. ++.||+++...
T Consensus 16 ~~~~~~~l-~~~~~~~eg~~~d~~g~-~l~~~~~~~~~i~~~~~~~~-~~~~~~---~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 16 AGAEARRL-ADGFTWTEGPVYVPARS-AVIFSDVRQNRTWAWSDDGQ-LSPEMH---PSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp TTCCCEEE-ECCCSSEEEEEEEGGGT-EEEEEEGGGTEEEEEETTSC-EEEEES---SCSSEEEEEECTTCCEEEEETTT
T ss_pred CCCcEEEE-ecCCccccCCeEeCCCC-EEEEEeCCCCEEEEEECCCC-eEEEEC---CCCCcceeeECCCCcEEEEecCC
Confidence 34444544 45788999999999877 89999999999999999998 555443 24567888864 67899998877
Q ss_pred CceeeeccC
Q psy951 97 GSLYKQDKF 105 (428)
Q Consensus 97 ~~I~~~~~~ 105 (428)
+.|.+.+..
T Consensus 90 ~~i~~~d~~ 98 (296)
T 3e5z_A 90 RRLERQREP 98 (296)
T ss_dssp TEEEEECST
T ss_pred CeEEEEcCC
Confidence 888888874
No 62
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.58 E-value=1.7e-05 Score=73.72 Aligned_cols=99 Identities=15% Similarity=0.270 Sum_probs=70.9
Q ss_pred EEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccceee
Q psy951 2 FWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPIS 81 (428)
Q Consensus 2 yWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~ 81 (428)
|+++.+.. +|.+.+.+|+.+...+......|.+|++|.. + +||+++...+.|.+.+.+|......... ....|.+
T Consensus 71 ~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g-~l~v~~~~~~~i~~~d~~g~~~~~~~~~--~~~~~~~ 145 (299)
T 2z2n_A 71 WFTENAAN-KIGRITKKGIIKEYTLPNPDSAPYGITEGPN-G-DIWFTEMNGNRIGRITDDGKIREYELPN--KGSYPSF 145 (299)
T ss_dssp EEEETTTT-EEEEECTTSCEEEEECSSTTCCEEEEEECTT-S-CEEEEETTTTEEEEECTTCCEEEEECSS--TTCCEEE
T ss_pred EEeCCCCC-eEEEECCCCcEEEEeCCCcCCCceeeEECCC-C-CEEEEecCCceEEEECCCCCEEEecCCC--CCCCCce
Confidence 55554433 7888888876433222234668999999964 5 7999998889999999977655443333 3567888
Q ss_pred eecc-ccEEEEEeCCCCceeeeccC
Q psy951 82 LDVF-ENNIYWLARDTGSLYKQDKF 105 (428)
Q Consensus 82 l~~~-~~~lYwtD~~~~~I~~~~~~ 105 (428)
+.+. +++||+++...+.|.+.+..
T Consensus 146 i~~~~~g~l~v~~~~~~~i~~~~~~ 170 (299)
T 2z2n_A 146 ITLGSDNALWFTENQNNAIGRITES 170 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEcCCCCEEEEeCCCCEEEEEcCC
Confidence 8876 56899999888889888873
No 63
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.54 E-value=2.6e-08 Score=84.40 Aligned_cols=81 Identities=23% Similarity=0.572 Sum_probs=59.3
Q ss_pred CCCCCCCC---CCCC--ccccCCCcceecCCCCCCCCCCCC------CCcccccCccCCCCCCCCCCCCCCCEEeeCCCC
Q psy951 135 APNPCSQS---PCSH--LCLVIPGGYQCACPENATPKLPGV------AEIRCSAAVERPRPLPRVCQCQNGGMCAESETG 203 (428)
Q Consensus 135 ~~n~C~~~---~C~~--~C~~~~~~~~C~C~~g~~~~~~~~------~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g 203 (428)
.+++|... +|.+ .|++.+++|+|.|++|| ...+.. .+..|++++++.. ..-+|.++++|++.. |
T Consensus 43 dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy-~g~~~~~~~~~~~~~~C~dideC~~---~~~~C~~~~~C~n~~-g 117 (143)
T 2bou_A 43 DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY-EPVSGAKTFKNESENTCQDVDECSS---GQHQCDSSTVCFNTV-G 117 (143)
T ss_dssp ECCGGGC----CCCTTEEEEECSSCEEEEECTTE-EETTCCSCBSSGGGCCEEECCHHHH---TCCCCCTTSEEEECS-S
T ss_pred ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc-ccCcCccccccCCCCCcCCccCccC---cCCCCCCCCEEECCC-C
Confidence 56888864 7985 99999999999999999 433210 1347876654321 112688999999987 6
Q ss_pred ceEecCCCCCccCccCC
Q psy951 204 DLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 204 ~~~C~C~~gy~G~~Ce~ 220 (428)
+|+|.|++||.|..+..
T Consensus 118 ~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 118 SYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp CEEEECCSSSCBCTTCC
T ss_pred CEEeeCCCCcccCCCCc
Confidence 89999999999877543
No 64
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.50 E-value=2.9e-05 Score=73.98 Aligned_cols=93 Identities=14% Similarity=0.163 Sum_probs=63.9
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCC-------------------CCCceeEEEcCCCCCEEEEEECCCCeEEEEEc
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTG-------------------VRHPTGLSVDAAMDHTLYWVDSKLNTIESVRH 61 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~-------------------~~~P~glavD~~~~~~lYW~d~~~~~I~~~~l 61 (428)
++|+|.... +|.+.+.++...+.+.... ...|.||++|...+ +||.+|... .|.+++.
T Consensus 32 ~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~~~-~i~~~d~ 108 (322)
T 2fp8_A 32 GFYTSVQDG-RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDCYY-HLSVVGS 108 (322)
T ss_dssp SEEEECTTS-EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEETTT-EEEEECT
T ss_pred EEEEEcCCC-eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEECCC-CEEEEeC
Confidence 589987654 8999988876555543211 24799999997567 899999864 4888888
Q ss_pred CCCCeEEEEeCC--CCccceeeeecc--ccEEEEEeCCC
Q psy951 62 DGRNRQTILSGS--DKLQHPISLDVF--ENNIYWLARDT 96 (428)
Q Consensus 62 dG~~~~~i~~~~--~~~~~p~~l~~~--~~~lYwtD~~~ 96 (428)
++...+++.... ..+..|-+|++. +++||++|..+
T Consensus 109 ~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 109 EGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVST 147 (322)
T ss_dssp TCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCS
T ss_pred CCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcc
Confidence 865455554311 123457777765 47899999653
No 65
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.50 E-value=7.5e-08 Score=99.85 Aligned_cols=76 Identities=24% Similarity=0.590 Sum_probs=58.5
Q ss_pred CCCCCCCCCCCC--ccccCCCc-cee-cCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCC---EEeeCCCCceEe
Q psy951 135 APNPCSQSPCSH--LCLVIPGG-YQC-ACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGG---MCAESETGDLTC 207 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~-~~C-~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg---~C~~~~~g~~~C 207 (428)
.+++|..++|.+ .|++..++ |+| .|++|| . + .+..|++..+| ... +-.|.+++ +|++.. +.|+|
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~Gy-t---G-dg~~CeDiDEC-~~~--p~~C~~gg~~~~CvNt~-gsY~C 72 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGF-L---G-NGTHCEDLDEC-ALV--PDICFSTSKVPRCVNTQ-PGFHC 72 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTB-C---S-CSSSCCBCCTT-TTS--CCCSCCCSSSCCEEECS-SSEEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCcc-C---C-CCCCccccccc-cCC--CCcccCCccccceeecc-Cceec
Confidence 358898889987 99999865 999 999999 2 2 34889866653 222 21388988 999987 57999
Q ss_pred c-CCCCCccCccC
Q psy951 208 N-CRQDFAGTFCE 219 (428)
Q Consensus 208 ~-C~~gy~G~~Ce 219 (428)
. |++||+|..|+
T Consensus 73 ~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 73 LPCPPRYRGNQPV 85 (634)
T ss_dssp CCCCTTEEECCCE
T ss_pred ccCCCCcccCccc
Confidence 9 99999988754
No 66
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.50 E-value=1.2e-07 Score=91.09 Aligned_cols=70 Identities=31% Similarity=0.690 Sum_probs=54.2
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccc-cCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCC
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCS-AAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQ 211 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~-~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~ 211 (428)
..++|..++|.+ .|.+..++|.|.|++|| .|..|+ +.++ |... ...+|.| .|.+.. |.|.|.|++
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~-------~g~~C~~~~~e-C~~~-~~~~C~~--~C~~~~-g~~~C~C~~ 71 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGY-------EGSNCELAKNE-CHPE-RTDGCQH--FCLPGQ-ESYTCSCAQ 71 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSC-------CSSSSCCCSSS-CCTT-CTTSCSS--EEECCS-SSCEEECCT
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCC-------cCCccccCccc-CCCC-CCCCCcC--ccccCC-CeeEEeccc
Confidence 458999999988 89999999999999999 678998 4444 3321 0126766 999877 679999999
Q ss_pred CCccC
Q psy951 212 DFAGT 216 (428)
Q Consensus 212 gy~G~ 216 (428)
||.|.
T Consensus 72 g~~~~ 76 (317)
T 3h5c_B 72 GYRLG 76 (317)
T ss_dssp TEECC
T ss_pred ccccc
Confidence 99963
No 67
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.44 E-value=2e-08 Score=69.32 Aligned_cols=32 Identities=28% Similarity=0.633 Sum_probs=27.2
Q ss_pred CCCCCCEEeeC---CCCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAES---ETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~---~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
+|+|||+|+.. ..+.|.|.|++||+|.+||..
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 79999999863 235699999999999999864
No 68
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.41 E-value=5.9e-08 Score=85.94 Aligned_cols=74 Identities=19% Similarity=0.364 Sum_probs=54.0
Q ss_pred CCCCCCC-ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCC----CceEecCCCCCc
Q psy951 140 SQSPCSH-LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESET----GDLTCNCRQDFA 214 (428)
Q Consensus 140 ~~~~C~~-~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~----g~~~C~C~~gy~ 214 (428)
..++|.| +|++..++|+|.|++|| ...+ +..|++.+++.. ....-+|.++++|++... +.|.|.|++||+
T Consensus 9 ~~~pC~ng~C~~~~g~~~C~C~~G~-~g~~---~~~C~~id~C~~-~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~ 83 (186)
T 1z1y_A 9 VDTICXNGQLVQMSNHFXCMCNEGL-VHLS---ENTCEEXNECXX-ETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYT 83 (186)
T ss_dssp TTCCCBTEEEEECSSCEEEEECTTE-EEEE---TTEEEECCCCSG-GGTTSEEETTEEEEECSSTTSSCSEEEEECTTEE
T ss_pred CCCCCCCCEeECCCCCeEeECCCCC-ccCC---CCccCCCCcccC-CCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCc
Confidence 3456777 89999999999999999 2221 248987654321 100226889999999874 689999999999
Q ss_pred cCcc
Q psy951 215 GTFC 218 (428)
Q Consensus 215 G~~C 218 (428)
|..|
T Consensus 84 g~~~ 87 (186)
T 1z1y_A 84 LXED 87 (186)
T ss_dssp EETT
T ss_pred cCCC
Confidence 8743
No 69
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.40 E-value=4.9e-08 Score=79.81 Aligned_cols=72 Identities=24% Similarity=0.681 Sum_probs=50.8
Q ss_pred CCCCCCCCCCCCccccC-CCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCC
Q psy951 135 APNPCSQSPCSHLCLVI-PGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDF 213 (428)
Q Consensus 135 ~~n~C~~~~C~~~C~~~-~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy 213 (428)
.+|+|..++|+++|++. +++|+|.|++|| ..... ....|... + ... +|. ++|++ . +.|.|.|++||
T Consensus 3 dideC~~~pC~~~C~~~~~g~y~C~C~~Gy-~g~~~-~~~~C~~~---C--~~~--~C~--~~C~~-~-~~y~C~C~~Gy 69 (118)
T 1dx5_I 3 PVDPCFRANCEYQCQPLDQTSYLCVCAEGF-APIPH-EPHRCQMF---C--NQT--ACP--ADCDP-N-TQASCECPEGY 69 (118)
T ss_dssp CCCGGGGCCCSSEEEECSSSCEEEECCTTE-EEETT-EEEEEEEC---C--CSS--EEE--CEECT-T-STTCEECCTTE
T ss_pred ccccCCCCCCCCCCCCCCCCCEEeECCCCc-cccCC-CCCccccc---c--CCC--CCC--CcccC-C-CCeEeECCCCc
Confidence 46899889999999999 899999999999 22211 11234321 1 111 232 68877 3 67999999999
Q ss_pred c---cCccC
Q psy951 214 A---GTFCE 219 (428)
Q Consensus 214 ~---G~~Ce 219 (428)
. |..|+
T Consensus 70 ~~~~g~~C~ 78 (118)
T 1dx5_I 70 ILDDGFICT 78 (118)
T ss_dssp EEETTTEEE
T ss_pred cCCCCCccc
Confidence 9 88885
No 70
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.38 E-value=3.3e-05 Score=75.16 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=57.2
Q ss_pred EEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeC---CCCccceeeeecccc-----EEEEEeC
Q psy951 23 RSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSG---SDKLQHPISLDVFEN-----NIYWLAR 94 (428)
Q Consensus 23 ~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~---~~~~~~p~~l~~~~~-----~lYwtD~ 94 (428)
..++.+++..|.+|++++. + +||.++.. ++|.+++ +|+ .+.+... ...+..|.+|++..+ +||.++.
T Consensus 23 ~~~va~~l~~P~~ia~~pd-G-~l~V~e~~-g~I~~i~-~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLPD-G-GMLIAERP-GRIRLFR-EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp EEEEECCCSCEEEEEECTT-S-CEEEEETT-TEEEEEE-TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEECCCCCceEEEEcCC-C-eEEEEeCC-CeEEEEE-CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 3344568999999999975 5 69999976 9999999 775 3333321 114668999998765 9999986
Q ss_pred CC-----CceeeeccCC
Q psy951 95 DT-----GSLYKQDKFG 106 (428)
Q Consensus 95 ~~-----~~I~~~~~~g 106 (428)
.. .+|.+.+.++
T Consensus 98 ~~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLG 114 (352)
T ss_dssp ECTTSSEEEEEEEEECS
T ss_pred cCCCCCccEEEEEEeCC
Confidence 53 5688877664
No 71
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.36 E-value=8.8e-05 Score=72.20 Aligned_cols=80 Identities=11% Similarity=0.088 Sum_probs=57.6
Q ss_pred EEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeC---CCCccceeeeeccc-----cEEEEEeC
Q psy951 23 RSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSG---SDKLQHPISLDVFE-----NNIYWLAR 94 (428)
Q Consensus 23 ~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~---~~~~~~p~~l~~~~-----~~lYwtD~ 94 (428)
..++.+++..|.+|++++. + +||.++.. ++|.+++.+|. +++..- ......|.+|++.. ++||.++.
T Consensus 21 ~~~va~~l~~P~~ia~~pd-G-~l~V~e~~-g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLGG-G-RYLVTERP-GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEECSCSCEEEEEEEET-T-EEEEEETT-TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEeCCCCCCeEEEEcCC-C-eEEEEeCC-CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 3344568999999999974 6 79999987 99999987776 444321 11456789998874 59999985
Q ss_pred C---C----CceeeeccCCC
Q psy951 95 D---T----GSLYKQDKFGR 107 (428)
Q Consensus 95 ~---~----~~I~~~~~~g~ 107 (428)
. . .+|.+.+.++.
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp EECGGGCEEEEEEEEEECSS
T ss_pred ccCCCCCcceEEEEEEECCC
Confidence 3 2 56777776643
No 72
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.35 E-value=2.6e-07 Score=95.85 Aligned_cols=85 Identities=19% Similarity=0.504 Sum_probs=61.1
Q ss_pred cCCCCCCCCCCCC--CCC-----ccccCCCcceec-CCCCCCCCCCC---------CCCcccccCccCCCCCCCCCCCCC
Q psy951 131 YNTSAPNPCSQSP--CSH-----LCLVIPGGYQCA-CPENATPKLPG---------VAEIRCSAAVERPRPLPRVCQCQN 193 (428)
Q Consensus 131 ~~~~~~n~C~~~~--C~~-----~C~~~~~~~~C~-C~~g~~~~~~~---------~~g~~C~~~~~~~~~~~~~c~C~n 193 (428)
.++ .+++|..++ |.+ .|++..++|+|. |++|| ..... ..+..|.+..+|.. .+-+|.+
T Consensus 40 ~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy-~G~~c~g~g~~~~~~dg~~C~dideC~~---~~~pC~~ 114 (634)
T 1yo8_A 40 HCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRY-RGNQPVGVGLEAAKTEKQVCEPENPCKD---KTHNCHK 114 (634)
T ss_dssp SCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTE-EECCCEESSSHHHHSCCCCEEECCTTTT---TCCCCCT
T ss_pred Ccc-ccccccCCCCcccCCccccceeeccCceecccCCCCc-ccCccccccccccccCCCcccccccccC---CCccccc
Confidence 343 678998776 987 799999999999 99999 32210 01234766554322 1236889
Q ss_pred CCEEeeCC---CCceEecCCCCCcc--CccCC
Q psy951 194 GGMCAESE---TGDLTCNCRQDFAG--TFCEN 220 (428)
Q Consensus 194 gg~C~~~~---~g~~~C~C~~gy~G--~~Ce~ 220 (428)
+++|++.. .|+|+|.|++||.| ..|+.
T Consensus 115 ~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 115 HAECIYLGHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp TEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred CccccccccccccceeeeccCCccccCccccc
Confidence 99999886 26799999999997 68873
No 73
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.33 E-value=4.3e-08 Score=84.86 Aligned_cols=83 Identities=25% Similarity=0.495 Sum_probs=53.9
Q ss_pred CCCCCCC-CCCCC-ccccCCCcceecCCCCCCCCCCCCCCcccccCcc-CCCCCCCCCCCCCCCEEeeCCC---CceEec
Q psy951 135 APNPCSQ-SPCSH-LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVE-RPRPLPRVCQCQNGGMCAESET---GDLTCN 208 (428)
Q Consensus 135 ~~n~C~~-~~C~~-~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~-~~~~~~~~c~C~ngg~C~~~~~---g~~~C~ 208 (428)
.+|+|.. ++|.+ +|++.+++|+|.|++|| .+.+. |..|++.++ .|.....+|.+.++++|++..+ +.|.|.
T Consensus 2 dideC~~~~~C~~~~C~n~~gsy~C~C~~Gy-~~~~~--g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~ 78 (162)
T 1uzk_A 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDF-ELNPT--RVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC 78 (162)
T ss_dssp CCCGGGSTTSSBTSEEEEETTEEEEECCTTC-EECTT--SSBEECCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred ccccCCCCCCCCCCEeECCCCCEEEeCCCCC-eECCC--CCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence 4688874 78864 99999999999999999 54432 689986543 1222223344457889987752 169999
Q ss_pred CCCCCc-cCccCC
Q psy951 209 CRQDFA-GTFCEN 220 (428)
Q Consensus 209 C~~gy~-G~~Ce~ 220 (428)
|++||. |..|+.
T Consensus 79 C~~G~~~~~~C~~ 91 (162)
T 1uzk_A 79 CSLGKAWGTPCEM 91 (162)
T ss_dssp TTTCCEETTTTEE
T ss_pred CCCCCCcCCCccc
Confidence 999998 777874
No 74
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.33 E-value=1e-07 Score=84.48 Aligned_cols=81 Identities=20% Similarity=0.404 Sum_probs=60.2
Q ss_pred CCCCCCCCCCC--ccc----cCCCcceecCCCCCCCCCCCCCCcccccCc-cCCCCCCCCCCC-CCCCEEeeCCCCceEe
Q psy951 136 PNPCSQSPCSH--LCL----VIPGGYQCACPENATPKLPGVAEIRCSAAV-ERPRPLPRVCQC-QNGGMCAESETGDLTC 207 (428)
Q Consensus 136 ~n~C~~~~C~~--~C~----~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~-~~~~~~~~~c~C-~ngg~C~~~~~g~~~C 207 (428)
+++|..++|.+ .|+ +..++|+|.|++|| ...+. .+..|++.. ..|.. +| .++++|++.. |+|+|
T Consensus 91 ~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy-~g~~~-~~~~C~~~~~~~C~~-----~C~~~~~~C~n~~-g~y~C 162 (186)
T 1z1y_A 91 LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGX-VPNPE-DEXXCTXTGETACQL-----XCNTDNEVCXNVE-GVYXC 162 (186)
T ss_dssp EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEE-EEETT-TTTEEEEEECCCCCC-----CCCTTTEEEEEET-TEEEE
T ss_pred CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCC-cccCC-CCCcceEcCCCcccc-----cccccCcceecCC-CCeee
Confidence 46777777874 777 77789999999999 33221 237898752 22321 68 8999999987 78999
Q ss_pred cCCCCCccCccCCCCCC
Q psy951 208 NCRQDFAGTFCENYTGI 224 (428)
Q Consensus 208 ~C~~gy~G~~Ce~~~~~ 224 (428)
.|++||.|..|+.....
T Consensus 163 ~C~~G~~g~~~~~~~~~ 179 (186)
T 1z1y_A 163 QCMEGFTFDXEXNVCLG 179 (186)
T ss_dssp EECTTCEEETTTTEEES
T ss_pred ECCCCCccCcccccCCc
Confidence 99999999999875543
No 75
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.31 E-value=1.5e-07 Score=79.95 Aligned_cols=29 Identities=31% Similarity=0.942 Sum_probs=26.5
Q ss_pred CCCCCCCCCCCC-ccccCCCcceecCCCCC
Q psy951 135 APNPCSQSPCSH-LCLVIPGGYQCACPENA 163 (428)
Q Consensus 135 ~~n~C~~~~C~~-~C~~~~~~~~C~C~~g~ 163 (428)
.+|+|..++|.+ +|++.+++|+|.|++||
T Consensus 3 dideC~~~pC~ng~C~n~~g~y~C~C~~G~ 32 (147)
T 2w86_A 3 DIDECESSPCINGVCKNSPGSFICECSSES 32 (147)
T ss_dssp CCCGGGGCCSBTSEEEEETTEEEEECCTTE
T ss_pred cCccCcCCCCCCCEeECCCCCEEeECCCCc
Confidence 568898889987 99999999999999999
No 76
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.30 E-value=2.6e-07 Score=80.48 Aligned_cols=69 Identities=29% Similarity=0.762 Sum_probs=49.9
Q ss_pred CCCCC-CCC-ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccC
Q psy951 139 CSQSP-CSH-LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGT 216 (428)
Q Consensus 139 C~~~~-C~~-~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~ 216 (428)
|...+ |.+ .|+ ++++|.|++|| .|..|+.....+.. ..+|.|+|+|++...++|+|.|++||+|.
T Consensus 99 C~~~~~C~~g~C~---~~~~C~C~~G~-------~G~~C~~~~~~C~~---~~~C~~~g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 99 CIPHPGCVHGICN---EPWQCLCETNW-------GGQLCDKDLNYCGT---HQPCLNGGTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp ECCCTTCSSEECS---STTCCEECTTE-------ETTTTCEESCHHHH---TCCCCTTCEEEECSTTCEEEECCTTCCST
T ss_pred CCCCCCCCCCCcC---CCCEEeCCCCC-------CCCcccCCCCCCCC---CCCCCCCCEEcCCCCCCcEeECCCCCcCc
Confidence 43343 665 666 56899999999 56888732221211 13799999999864467999999999999
Q ss_pred ccCC
Q psy951 217 FCEN 220 (428)
Q Consensus 217 ~Ce~ 220 (428)
.||.
T Consensus 166 ~Ce~ 169 (169)
T 2vj2_A 166 NCEI 169 (169)
T ss_dssp TSCC
T ss_pred CcCC
Confidence 9974
No 77
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.29 E-value=1.7e-07 Score=76.58 Aligned_cols=67 Identities=27% Similarity=0.517 Sum_probs=51.4
Q ss_pred CCCCCCCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccC
Q psy951 138 PCSQSPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGT 216 (428)
Q Consensus 138 ~C~~~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~ 216 (428)
+|..++|...|++ .++|+|.|++|| .+.+ +..|.+++++... . +| +++|++.. |+|.|.|++||.|.
T Consensus 45 ~C~~~~C~~~C~~-~~~y~C~C~~Gy-~~~~---g~~C~dideC~~~--~--~C--~~~C~n~~-g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 45 FCNQTACPADCDP-NTQASCECPEGY-ILDD---GFICTDIDECENG--G--FC--SGVCHNLP-GTFECICGPDSALA 111 (118)
T ss_dssp CCCSSEEECEECT-TSTTCEECCTTE-EEET---TTEEEECCHHHHC--S--SC--SSEEEECS-SSEEEEECSSSSCE
T ss_pred ccCCCCCCCcccC-CCCeEeECCCCc-cCCC---CCccccccccCCC--C--CC--cCeEEeCC-CCEEEECCCCCccC
Confidence 4777788889988 588999999999 3322 5889876654321 2 46 68999987 67999999999974
No 78
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.24 E-value=0.00014 Score=68.17 Aligned_cols=97 Identities=6% Similarity=-0.061 Sum_probs=66.8
Q ss_pred ccccceeEEeec----cCCCEEEEEecCCCeEEEeeeccccC-CceEEEEe---cc-ccceeeeeeccCCeEEEEeCCCC
Q psy951 321 SDERRIEALDID----PVDEIIYWVDSYDRNIRRSFMLEAQK-GQVQAVIS---DE-RRIEALDIDPVDEIIYWVDSYDR 391 (428)
Q Consensus 321 ~~~~~~~~l~~d----~~~~~lyWtd~~~~~I~ra~l~g~~~-~~~~~i~~---~~-~~p~glavD~~~~~lYwtd~~~~ 391 (428)
.....+.+++++ +..+.||+++....+|.+..+++... ...+++.. .. ..|.+|++|.. ++||.++.+..
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~l~v~~~~~~ 247 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED-NNLLVANWGSS 247 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT-CCEEEEEETTT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC-CCEEEEEcCCC
Confidence 344567889999 87779999999888999888763100 11122222 12 67999999975 58999998878
Q ss_pred cEEEEEcc-CcceeEEEecccCCCCCCCccccc
Q psy951 392 NIRRSFML-EAQKGQVQAGASRHQNGVPASSQR 423 (428)
Q Consensus 392 ~I~~~~~~-g~~~~~l~~~~~~~~~~~p~~~~~ 423 (428)
.|.+.+.+ |+..+.+- .|...|.++++
T Consensus 248 ~i~~~d~~~g~~~~~~~-----~~~~~~~~i~~ 275 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIR-----CPFEKPSNLHF 275 (314)
T ss_dssp EEEEECTTCBSCSEEEE-----CSSSCEEEEEE
T ss_pred EEEEEcCCCCcEeEEEe-----CCCCCceeEEE
Confidence 89999988 65544432 33456677765
No 79
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.22 E-value=9.8e-07 Score=56.81 Aligned_cols=30 Identities=37% Similarity=0.849 Sum_probs=27.3
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~ 220 (428)
+|.|||+|++.. +.|.|.|++||+|..||.
T Consensus 10 pC~ngg~C~~~~-~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 10 PCLNGGSCKDDI-NSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCCTTCEEEEET-TEEEEECCTTCCSTTSCC
T ss_pred CCCCCCEeEcCC-CceEeECCCCCcCCccCC
Confidence 799999999886 679999999999999974
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.21 E-value=0.0024 Score=60.38 Aligned_cols=91 Identities=11% Similarity=0.031 Sum_probs=65.3
Q ss_pred ceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEccCccee
Q psy951 325 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG 404 (428)
Q Consensus 325 ~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~ 404 (428)
.+.+++++|..++||.++.....|....+.. .+....+ ....|.+++++..++.||.++...+.|.+.+.......
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRN---GNILAKV-AAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTT---CCEEEEE-ECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEE-EcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 4678999999999999998888888877754 2222222 35668899999999999999998889999998654443
Q ss_pred EEEecccCCCCCCCcccccc
Q psy951 405 QVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 405 ~l~~~~~~~~~~~p~~~~~~ 424 (428)
..+.. ...|.+++++
T Consensus 308 ~~~~~-----~~~~~~~~~s 322 (353)
T 3vgz_A 308 KTFDT-----PTHPNSLALS 322 (353)
T ss_dssp EEEEC-----CSEEEEEEEC
T ss_pred EEEec-----CCCCCeEEEc
Confidence 33321 1245666554
No 81
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.20 E-value=0.00049 Score=65.15 Aligned_cols=82 Identities=9% Similarity=0.058 Sum_probs=59.7
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceE-----EEEe--ccccceeeeeeccCCeEEEEeCCCCcEEE
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQ-----AVIS--DERRIEALDIDPVDEIIYWVDSYDRNIRR 395 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~-----~i~~--~~~~p~glavD~~~~~lYwtd~~~~~I~~ 395 (428)
...+.++++++..++||+++....+|++..++.. ..... .... +...|.+|++|.. ++||.++.+...|.+
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~-g~~~~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDD-GVTIQPFGATIPYYFTGHEGPDSCCIDSD-DNLYVAMYGQGRVLV 258 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT-SSSEEEEEEEEEEECCSSSEEEEEEEBTT-CCEEEEEETTTEEEE
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCC-CcCcccccceEEEecCCCCCCCceEECCC-CCEEEEEcCCCEEEE
Confidence 4467899999998899999988889999888421 01111 1111 2347999999986 568888887778999
Q ss_pred EEccCcceeEE
Q psy951 396 SFMLEAQKGQV 406 (428)
Q Consensus 396 ~~~~g~~~~~l 406 (428)
.+.+|+..+++
T Consensus 259 ~d~~g~~~~~~ 269 (333)
T 2dg1_A 259 FNKRGYPIGQI 269 (333)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99887655544
No 82
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.15 E-value=0.00042 Score=66.23 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=53.7
Q ss_pred CceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCe-EEEEeCCCCccceeeeec-cccEEEEEeCCCCceeeeccCCC
Q psy951 32 HPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNR-QTILSGSDKLQHPISLDV-FENNIYWLARDTGSLYKQDKFGR 107 (428)
Q Consensus 32 ~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~-~~i~~~~~~~~~p~~l~~-~~~~lYwtD~~~~~I~~~~~~g~ 107 (428)
.|.+|++| .+ +||.+....+.|..++...... ..+ .. ...|.+|++ .+++||+++...++|.+.+..+.
T Consensus 45 ~~~~i~~~--~~-~lyv~~~~~~~v~viD~~t~~~~~~i-~~---~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 45 VAQSMVIR--DG-IGWIVVNNSHVIFAIDINTFKEVGRI-TG---FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp CEEEEEEE--TT-EEEEEEGGGTEEEEEETTTCCEEEEE-EC---CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred cceEEEEE--CC-EEEEEEcCCCEEEEEECcccEEEEEc-CC---CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 58999997 46 8999999899999999975444 444 32 567888887 67899999966778888876643
No 83
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.14 E-value=0.00025 Score=68.21 Aligned_cols=95 Identities=14% Similarity=0.072 Sum_probs=66.2
Q ss_pred ceeEEeeccCCCEEEEEecCCCeEEEeeeccccC---CceE-----EEEeccccceeeeeeccCCeEEEEeCCCCcEEEE
Q psy951 325 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK---GQVQ-----AVISDERRIEALDIDPVDEIIYWVDSYDRNIRRS 396 (428)
Q Consensus 325 ~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~---~~~~-----~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~ 396 (428)
.+.+|++++..+.||+++....+|++...+.... ...+ ....+...|.||++|.. ++||.++.....|.+.
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~~ 274 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGVI 274 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEEE
Confidence 3568999999999999999888999987532100 1111 11123458999999986 7999999999999999
Q ss_pred Ec-cCcceeEEEecccCCCCCCCcccccc
Q psy951 397 FM-LEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 397 ~~-~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+. +|+. +++.... ....|.+++++
T Consensus 275 d~~~G~~-~~~~~~~---~~~~p~~va~~ 299 (343)
T 2qe8_A 275 TSADRAY-KLLVTDE---KLSWTDSFNFG 299 (343)
T ss_dssp ETTTTEE-EEEEECG---GGSCEEEEEEC
T ss_pred ECCCCCE-EEEEECC---ceecCCeeEEC
Confidence 99 8864 3344221 14567777764
No 84
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.10 E-value=0.0007 Score=64.59 Aligned_cols=94 Identities=11% Similarity=0.039 Sum_probs=65.8
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeec---c-ccCCceEEEEe---ccccceeeeeeccCCeEEEEeCCCCcEEE
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFML---E-AQKGQVQAVIS---DERRIEALDIDPVDEIIYWVDSYDRNIRR 395 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~---g-~~~~~~~~i~~---~~~~p~glavD~~~~~lYwtd~~~~~I~~ 395 (428)
...+.++++++..+.|||+|....+|++..++ | . -...+++.. ....|.|+++|..+ +||.+..+...|.+
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 44577999999999999999888899999886 3 1 112233332 34679999999764 68888877778999
Q ss_pred EEccCcceeEEEecccCCCCCCCccccc
Q psy951 396 SFMLEAQKGQVQAGASRHQNGVPASSQR 423 (428)
Q Consensus 396 ~~~~g~~~~~l~~~~~~~~~~~p~~~~~ 423 (428)
.+.+|+..+++. .|...|.+++.
T Consensus 256 ~d~~g~~~~~i~-----~~~~~~~~~af 278 (326)
T 2ghs_A 256 YDTDGNHIARYE-----VPGKQTTCPAF 278 (326)
T ss_dssp ECTTCCEEEEEE-----CSCSBEEEEEE
T ss_pred ECCCCCEEEEEE-----CCCCCcEEEEE
Confidence 888776544432 33344556554
No 85
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.10 E-value=1.7e-06 Score=57.55 Aligned_cols=33 Identities=30% Similarity=0.737 Sum_probs=27.8
Q ss_pred CCCCCCEEee-CCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAE-SETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~-~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|+|||+|.. ...+.|.|.|++||+|.+||...
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 7999999984 33467999999999999998753
No 86
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.10 E-value=2.7e-06 Score=58.79 Aligned_cols=34 Identities=32% Similarity=0.787 Sum_probs=28.4
Q ss_pred CCCCCCEEee-CCCCceEecCCCCCccCccCCCCC
Q psy951 190 QCQNGGMCAE-SETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 190 ~C~ngg~C~~-~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
+|+|||+|+. ...+.|.|.|++||+|.+||....
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 7999999993 233679999999999999998654
No 87
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.02 E-value=7.9e-08 Score=88.78 Aligned_cols=80 Identities=11% Similarity=-0.006 Sum_probs=61.2
Q ss_pred CCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCC----CCCCCC--------------------
Q psy951 136 PNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPR----PLPRVC-------------------- 189 (428)
Q Consensus 136 ~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~----~~~~~c-------------------- 189 (428)
.++|.+.+|.+ +|++...+|+|.||.|| .|..|+...+.+. ....+|
T Consensus 99 ~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf-------~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~ 171 (267)
T 4fbr_A 99 NIVAVSIKSNDGGKTLTGTTTYNGEGPIGF-------KSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVD 171 (267)
T ss_dssp CEEEEEEECSSTTSEEEEEEEETTSCCEEE-------EEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEE
T ss_pred ccccCCCCCCCCCEEecCCccEEeeCCCCc-------cccCCCCCcccccccCCcCCccccCCcceecccccccccccCC
Confidence 35788888988 99999999999999999 5677776543210 000111
Q ss_pred -CCCCCCEEeeCCCCceEecCCCCCccCccCCCCC
Q psy951 190 -QCQNGGMCAESETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 190 -~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
+|.|+|+|++.. ++|+|.||+||+|..|+....
T Consensus 172 ~~c~ngg~C~dg~-~~y~C~Cp~Gf~G~~c~~~i~ 205 (267)
T 4fbr_A 172 AKSNDGGKTLSGT-MTYNGEGPIGFRGTLTSPDTY 205 (267)
T ss_dssp EECSSTTSEEEEE-EEETTSCCEEEEEEEEETTEE
T ss_pred CCCCCCCEeeCCC-CCeEEeCCCCccccccccccc
Confidence 599999999877 579999999999999987654
No 88
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.01 E-value=0.00076 Score=65.37 Aligned_cols=101 Identities=20% Similarity=0.262 Sum_probs=67.6
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEE-----eCCCCCceeEEEcCC---CCCEEEEEECCC-----CeEEEEEcCCC---
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLV-----MTGVRHPTGLSVDAA---MDHTLYWVDSKL-----NTIESVRHDGR--- 64 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~-----~~~~~~P~glavD~~---~~~~lYW~d~~~-----~~I~~~~ldG~--- 64 (428)
||.++.. .+|.+.+ ||+. +.+. ..+...|.||++++. ++ +||.++... ++|.+.++++.
T Consensus 44 l~V~e~~--g~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g-~lYv~~~~~~~~~~~~v~r~~~~~~~~~ 118 (352)
T 2ism_A 44 MLIAERP--GRIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEP-YVYAYRTVAEGGLRNQVVRLRHLGERGV 118 (352)
T ss_dssp EEEEETT--TEEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSC-EEEEEEEECTTSSEEEEEEEEECSSCEE
T ss_pred EEEEeCC--CeEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCC-EEEEEEecCCCCCccEEEEEEeCCCCcC
Confidence 4667754 4788888 7753 3332 234678999999987 67 899998754 78999999874
Q ss_pred CeEEEEeC----CCCccceeeeecc-ccEEEEEeCC-------------CCceeeeccCC
Q psy951 65 NRQTILSG----SDKLQHPISLDVF-ENNIYWLARD-------------TGSLYKQDKFG 106 (428)
Q Consensus 65 ~~~~i~~~----~~~~~~p~~l~~~-~~~lYwtD~~-------------~~~I~~~~~~g 106 (428)
..++++.. ......|-+|.+. .++||+++-. .++|.|++.+|
T Consensus 119 ~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 119 LDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred ceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 34555441 1133456666654 5699999742 25677777765
No 89
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.01 E-value=2.7e-06 Score=71.79 Aligned_cols=65 Identities=17% Similarity=0.369 Sum_probs=44.8
Q ss_pred ccccCCCcceecCCCCCCCCCC----CCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccC
Q psy951 147 LCLVIPGGYQCACPENATPKLP----GVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCE 219 (428)
Q Consensus 147 ~C~~~~~~~~C~C~~g~~~~~~----~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce 219 (428)
.|++ .|+|.|++|| ...+ . .+..|++.+++.... ..+|.++++|++.. +.|+|.|++||+|..|+
T Consensus 14 ~C~~---~~~C~C~~G~-~g~~~~~~~-~~~~C~dideC~~~~--~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 14 SCVN---ATACRCNPGF-SSFSEIITT-PMETCDDINECATLS--KVSCGKFSDCWNTE-GSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp EESS---SSCEEECTTE-ECSSSSBCS-TTCCCEECCGGGC------CCCTTEEEEECS-SCEEEEECTTEEETTCC
T ss_pred EEcC---CCEEeCCCCC-cCccccccC-CCCcCCccccccCCC--CCCCCCCCEEEcCC-CCeEeECCCCcccCcCc
Confidence 5554 4899999999 3211 1 136887766543221 12588999999987 67999999999998554
No 90
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.01 E-value=2.4e-06 Score=58.93 Aligned_cols=35 Identities=23% Similarity=0.576 Sum_probs=28.9
Q ss_pred CCCCCCEEee-CCCCceEecCCCCCccCccCCCCCC
Q psy951 190 QCQNGGMCAE-SETGDLTCNCRQDFAGTFCENYTGI 224 (428)
Q Consensus 190 ~C~ngg~C~~-~~~g~~~C~C~~gy~G~~Ce~~~~~ 224 (428)
+|+|||+|.. ...+.|.|.|++||+|.+||.....
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~~~ 48 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLK 48 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTEESTTSCEECSS
T ss_pred CCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCCcc
Confidence 7999999983 3346799999999999999976543
No 91
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.98 E-value=0.0048 Score=57.89 Aligned_cols=79 Identities=6% Similarity=0.015 Sum_probs=61.4
Q ss_pred cccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCce---EEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEc
Q psy951 322 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQV---QAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFM 398 (428)
Q Consensus 322 ~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~---~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~ 398 (428)
....|.+++++|..++||-++....+|..-.+.. ... ...+..-..|.+++++..++.||.+..+.+.|.+.++
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQN---PENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS---TTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCC---CcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 3446889999999999999998888887777754 222 2233444789999999999999999998888999888
Q ss_pred cCcce
Q psy951 399 LEAQK 403 (428)
Q Consensus 399 ~g~~~ 403 (428)
.....
T Consensus 251 ~~~~~ 255 (331)
T 3u4y_A 251 LSGTL 255 (331)
T ss_dssp TTTEE
T ss_pred CCCce
Confidence 75544
No 92
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.96 E-value=0.0018 Score=62.77 Aligned_cols=122 Identities=20% Similarity=0.239 Sum_probs=83.1
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEE-----eCCCCCceeEEEcCC---CCCEEEEEECC---C----CeEEEEEcCCC-
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLV-----MTGVRHPTGLSVDAA---MDHTLYWVDSK---L----NTIESVRHDGR- 64 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~-----~~~~~~P~glavD~~---~~~~lYW~d~~---~----~~I~~~~ldG~- 64 (428)
||.++.. .+|.+.+.||. +++. ..+...|.||++|+. ++ +||.++.. . ++|.+.++++.
T Consensus 42 l~V~e~~--g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g-~lyv~~~~~~~~~~~~~~v~r~~~~~~~ 116 (354)
T 3a9g_A 42 YLVTERP--GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKS-WVYLYASYFAEGGHIRNRVIRGRLDGST 116 (354)
T ss_dssp EEEEETT--TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSC-EEEEEEEEECGGGCEEEEEEEEEECSSS
T ss_pred EEEEeCC--CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCC-EEEEEEeccCCCCCcceEEEEEEECCCC
Confidence 4677765 48988887886 4432 234568999999986 67 89999864 3 68999999876
Q ss_pred ----CeEEEEeC--CCCccceeeeecc-ccEEEEEeCC-------------CCceeeeccCCCC-------ceeeeccCC
Q psy951 65 ----NRQTILSG--SDKLQHPISLDVF-ENNIYWLARD-------------TGSLYKQDKFGRG-------VPVLISKDL 117 (428)
Q Consensus 65 ----~~~~i~~~--~~~~~~p~~l~~~-~~~lYwtD~~-------------~~~I~~~~~~g~~-------~~~~~~~~~ 117 (428)
..++++.. ......|-+|.+. .++||+++-. .++|+|++.+|+- ..+++..++
T Consensus 117 ~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~ 196 (354)
T 3a9g_A 117 FKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH 196 (354)
T ss_dssp CCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC
T ss_pred cCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc
Confidence 24555431 1123445556653 6689999632 3689999998751 245666777
Q ss_pred CCCccccccc
Q psy951 118 VNPSGVKAYH 127 (428)
Q Consensus 118 ~~p~~I~v~~ 127 (428)
.+|.+|.+..
T Consensus 197 rnp~Gla~d~ 206 (354)
T 3a9g_A 197 RNPQGIDWHR 206 (354)
T ss_dssp SCCCEEEECT
T ss_pred CCcceEEEeC
Confidence 7888887654
No 93
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.94 E-value=6e-06 Score=59.22 Aligned_cols=35 Identities=29% Similarity=0.733 Sum_probs=29.1
Q ss_pred CCCCCCEEeeC----CCCceEecCCCCCccCccCCCCCC
Q psy951 190 QCQNGGMCAES----ETGDLTCNCRQDFAGTFCENYTGI 224 (428)
Q Consensus 190 ~C~ngg~C~~~----~~g~~~C~C~~gy~G~~Ce~~~~~ 224 (428)
+|+|||+|+.. ..+.|.|.|++||+|.+||.....
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~ 51 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM 51 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCS
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCc
Confidence 79999999872 346799999999999999875543
No 94
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.92 E-value=3.9e-06 Score=59.00 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=28.9
Q ss_pred CCCCCCEEeeC---CCCceEecCCCCCccCccCCCCCCC
Q psy951 190 QCQNGGMCAES---ETGDLTCNCRQDFAGTFCENYTGIG 225 (428)
Q Consensus 190 ~C~ngg~C~~~---~~g~~~C~C~~gy~G~~Ce~~~~~~ 225 (428)
+|+|||+|... ..+.|.|.|++||+|.+||......
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~ 53 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDN 53 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEECCCC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccCCCC
Confidence 69999999842 3356999999999999999865443
No 95
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.91 E-value=4.8e-05 Score=71.66 Aligned_cols=114 Identities=15% Similarity=0.197 Sum_probs=80.3
Q ss_pred CeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcC---CC--CeEEEEeCCCCccceeeeec
Q psy951 10 PRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHD---GR--NRQTILSGSDKLQHPISLDV 84 (428)
Q Consensus 10 ~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ld---G~--~~~~i~~~~~~~~~p~~l~~ 84 (428)
.+|.+.+.+|+... +...+..|+||++++..+ .|||+|...++|.+.++| |. +++++..-......|.++++
T Consensus 130 ~~l~~~d~~g~~~~--~~~~~~~pngi~~spdg~-~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~ 206 (297)
T 3g4e_A 130 GALYSLFPDHHVKK--YFDQVDISNGLDWSLDHK-IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI 206 (297)
T ss_dssp EEEEEECTTSCEEE--EEEEESBEEEEEECTTSC-EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred cEEEEEECCCCEEE--EeeccccccceEEcCCCC-EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence 36888888875433 334577899999999888 899999999999999985 32 24555543212457888887
Q ss_pred c-ccEEEEEeCCCCceeeeccCCCCceeeeccCCCCCcccccc
Q psy951 85 F-ENNIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKAY 126 (428)
Q Consensus 85 ~-~~~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v~ 126 (428)
. +++||.+++..++|.+.+.+++.....+......|..+...
T Consensus 207 d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 207 DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp BTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 5 67999999988899999987443433443333455555543
No 96
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.89 E-value=6e-06 Score=55.08 Aligned_cols=32 Identities=25% Similarity=0.681 Sum_probs=26.7
Q ss_pred CCCCCCEEeeCC-CCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESE-TGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~-~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.| |+|.... .+.|.|.|++||+|.+||...
T Consensus 13 pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 45 (46)
T 1k36_A 13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHFF 45 (46)
T ss_dssp SCSS-EEEEEETTTTEEEEEECTTCSSTTSCCCC
T ss_pred CCCC-CEeeccCCCCCEEEECCCCCccCCCCccc
Confidence 7889 7998754 257999999999999999753
No 97
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.86 E-value=0.011 Score=54.90 Aligned_cols=72 Identities=13% Similarity=0.097 Sum_probs=56.2
Q ss_pred CCceeEEEcCCCCCEEEEEEC--CCCeEEEEEcCCCCe-EEEEeCCCCccceeeeeccccEEEEEeCCCCceeeeccCC
Q psy951 31 RHPTGLSVDAAMDHTLYWVDS--KLNTIESVRHDGRNR-QTILSGSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 31 ~~P~glavD~~~~~~lYW~d~--~~~~I~~~~ldG~~~-~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g 106 (428)
..|.||+++.. + +||-+.. +.++|..+++..... +.+.-. ...++.++++.+++||.+.|..+.++..+...
T Consensus 21 ~f~~Gl~~~~d-g-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~--~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAEN-D-TLFESTGLYGRSSVRQVALQTGKVENIHKMD--DSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECST-T-EEEEEECSTTTCEEEEEETTTCCEEEEEECC--TTCCEEEEEEETTEEEEEETTCSEEEEEETTT
T ss_pred CCcccEEEeCC-C-eEEEECCCCCCCEEEEEECCCCCEEEEEecC--CCcceEEEEEeCCEEEEEEecCCEEEEEECCC
Confidence 46899999965 6 8999975 468999999975443 333323 35667788999999999999999999998763
No 98
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.83 E-value=5e-06 Score=57.87 Aligned_cols=41 Identities=17% Similarity=0.418 Sum_probs=33.8
Q ss_pred CCCCC--CCCCCccccCCCcceecCCCCCCCCCCCCCCcccccCcc
Q psy951 137 NPCSQ--SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 137 n~C~~--~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
|+|.. .+|++.|++.+++|+|.|++|| .+..+ +.+|.++++
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy-~L~~d--~~~C~dide 44 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGY-TLADN--GKACIPTGP 44 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTE-EECTT--SSCEEESSS
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCC-EECCC--CCeeccCcc
Confidence 67874 4799999999999999999999 66554 588987664
No 99
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.81 E-value=0.0011 Score=64.36 Aligned_cols=85 Identities=6% Similarity=-0.068 Sum_probs=56.0
Q ss_pred CCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeC----CCCccceeeeecc-----ccE
Q psy951 18 DGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSG----SDKLQHPISLDVF-----ENN 88 (428)
Q Consensus 18 DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~----~~~~~~p~~l~~~-----~~~ 88 (428)
+|-..+++.. ++..|.+|++++..+ +||.++. .++|.+++.+|...+.+... ......|.+|++. +++
T Consensus 6 ~g~~~~~va~-~l~~P~~i~~~pdG~-~l~V~e~-~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~ 82 (353)
T 2g8s_A 6 ATVNVEVLQD-KLDHPWALAFLPDNH-GMLITLR-GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR 82 (353)
T ss_dssp CCSEEEEEEE-EESSEEEEEECSTTC-CEEEEET-TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE
T ss_pred CCcEEEEEEC-CCCCcEEEEEcCCCC-EEEEEeC-CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCE
Confidence 4444444444 789999999998643 3999997 58999998877533222211 0124457788876 689
Q ss_pred EEEEeCC-------CCceeeeccC
Q psy951 89 IYWLARD-------TGSLYKQDKF 105 (428)
Q Consensus 89 lYwtD~~-------~~~I~~~~~~ 105 (428)
||.++.. ..+|.+.+.+
T Consensus 83 lYv~~~~~~~~g~~~~~v~r~~~~ 106 (353)
T 2g8s_A 83 IWLSYSEVGDDGKAGTAVGYGRLS 106 (353)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCCCCCceeEEEEEEEC
Confidence 9999754 2356666654
No 100
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.78 E-value=9.1e-05 Score=74.74 Aligned_cols=194 Identities=14% Similarity=0.176 Sum_probs=97.5
Q ss_pred CCeEEEEEcCCCC-------------------cEEEEeCCCCCceeEEEcCCCC---C--EEEEEEC-CC----CeEEEE
Q psy951 9 SPRIESAWMDGSH-------------------RRSLVMTGVRHPTGLSVDAAMD---H--TLYWVDS-KL----NTIESV 59 (428)
Q Consensus 9 ~~~I~~a~~DG~~-------------------~~~l~~~~~~~P~glavD~~~~---~--~lYW~d~-~~----~~I~~~ 59 (428)
..+|.|.+.||+. +..|+..++..|-||++|+.++ . ++|-+|. +. ..|..+
T Consensus 176 ~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i 255 (463)
T 2wg3_C 176 TGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQI 255 (463)
T ss_dssp TTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEE
T ss_pred CeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeee
Confidence 3689999999951 3346777999999999998753 1 3666775 22 233333
Q ss_pred EcCCCCe----EEEEeCCCCccceeeeecccc--------EEEEEeCCCCceeeeccCCCC---ceeeeccC--------
Q psy951 60 RHDGRNR----QTILSGSDKLQHPISLDVFEN--------NIYWLARDTGSLYKQDKFGRG---VPVLISKD-------- 116 (428)
Q Consensus 60 ~ldG~~~----~~i~~~~~~~~~p~~l~~~~~--------~lYwtD~~~~~I~~~~~~g~~---~~~~~~~~-------- 116 (428)
. .|.+. .++......-..|.++.++.+ .++..|+. ++|++...+... ....+..+
T Consensus 256 ~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 333 (463)
T 2wg3_C 256 I-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGY 333 (463)
T ss_dssp C-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSC
T ss_pred c-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCccccccc
Confidence 1 23322 122222101145777777544 48889986 779888765332 11222111
Q ss_pred -CCCCccccccccc-ccCCCCCCCCCCCCCCC---ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCC--
Q psy951 117 -LVNPSGVKAYHAQ-RYNTSAPNPCSQSPCSH---LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVC-- 189 (428)
Q Consensus 117 -~~~p~~I~v~~~~-~~~~~~~n~C~~~~C~~---~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c-- 189 (428)
...|.++.+..+. .|-......-....=.. +..+......+.|..+| .+..|... .|
T Consensus 334 ~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~~~p~~C~~~~-------~g~~c~~~---------~C~~ 397 (463)
T 2wg3_C 334 FSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPLMPEECRATV-------QPAQTLTS---------ECSR 397 (463)
T ss_dssp CCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSCSSCGGGCCCC-------CCCCCCCC---------HHHH
T ss_pred ccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccccccccCCCCC-------cCCCCccc---------cccC
Confidence 1234444433221 11110000000000000 01011112346777777 34556431 22
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGIG 225 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~~ 225 (428)
+|.| |+|... .+|.|++||+|..|+...+..
T Consensus 398 ~C~n-G~C~~~----~~C~C~~G~~G~~C~~~~C~~ 428 (463)
T 2wg3_C 398 LCRN-GYCTPT----GKCCCSPGWEGDFCRTAKCEP 428 (463)
T ss_dssp HCCS-EEECTT----SCEEECTTEESTTSCEECC--
T ss_pred CCCC-CccCCC----CeECCCCCcCCCcCCcCcCCC
Confidence 5888 799753 479999999999998665543
No 101
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.77 E-value=0.026 Score=52.65 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=56.5
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Ee----c---cccceeeeeeccCCeEEEEeCCCCcEE
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--IS----D---ERRIEALDIDPVDEIIYWVDSYDRNIR 394 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~----~---~~~p~glavD~~~~~lYwtd~~~~~I~ 394 (428)
..|.+++++|..++||.++....+|....++.. ++..+.+ +. + ...|.+++++..++.||.+......|.
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~ 256 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 256 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEE
Confidence 467899999999999999988888877777542 1222211 11 1 235668999999999999998888999
Q ss_pred EEEcc
Q psy951 395 RSFML 399 (428)
Q Consensus 395 ~~~~~ 399 (428)
+.+++
T Consensus 257 v~d~~ 261 (343)
T 1ri6_A 257 VFSVS 261 (343)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99987
No 102
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.76 E-value=8.8e-06 Score=59.34 Aligned_cols=43 Identities=26% Similarity=0.573 Sum_probs=35.7
Q ss_pred CCCCCCC--CCCCCccccCCC-cceecCCCCCCCCCCCCCCcccccCcc
Q psy951 135 APNPCSQ--SPCSHLCLVIPG-GYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 135 ~~n~C~~--~~C~~~C~~~~~-~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
.+|+|.. ++|+|.|++.++ +|+|.|++|| .|.++ +++|.+.++
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy-~L~~D--~~tC~d~de 49 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGY-SLLAD--GVSCTPTVE 49 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTE-EECTT--SSCEEECSS
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCC-eECCC--CCcccCccc
Confidence 5689974 479999999998 7999999999 77654 689988664
No 103
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.76 E-value=5.2e-07 Score=83.31 Aligned_cols=73 Identities=15% Similarity=0.066 Sum_probs=55.0
Q ss_pred CCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccC------CCCCC----------------CCC---CCCCCC
Q psy951 143 PCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVER------PRPLP----------------RVC---QCQNGG 195 (428)
Q Consensus 143 ~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~------~~~~~----------------~~c---~C~ngg 195 (428)
+|.+ .|++...+|.|.||.|| .+..|+...+. +...+ ..| +|+|||
T Consensus 39 ~c~ngG~C~~g~~~y~C~Cp~Gf-------~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG 111 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGEGPIGF-------RGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGG 111 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEE-------EEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTT
T ss_pred CcCCCCeecCCCCCeEEeCCCCc-------ccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCC
Confidence 4555 88998899999999999 56777654432 11110 122 699999
Q ss_pred EEeeCCCCceEecCCCCCccCccCCCCC
Q psy951 196 MCAESETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 196 ~C~~~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
+|++.. ++|+|.|+.||+|..|+....
T Consensus 112 ~C~~~~-~sy~C~C~~Gf~G~~Ce~~~d 138 (267)
T 4fbr_A 112 KTLTGT-TTYNGEGPIGFKSEVTDGDTY 138 (267)
T ss_dssp SEEEEE-EEETTSCCEEEEEEECCCCEE
T ss_pred EEecCC-ccEEeeCCCCccccCCCCCcc
Confidence 999877 579999999999999998653
No 104
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.73 E-value=1.7e-05 Score=56.19 Aligned_cols=31 Identities=23% Similarity=0.581 Sum_probs=27.9
Q ss_pred CCCCC--CEEeeCCCCceEecCCCCCc-cCccCCC
Q psy951 190 QCQNG--GMCAESETGDLTCNCRQDFA-GTFCENY 221 (428)
Q Consensus 190 ~C~ng--g~C~~~~~g~~~C~C~~gy~-G~~Ce~~ 221 (428)
||.|| |+|++.. +.|.|.|++||+ |..|+..
T Consensus 18 PC~nga~gtC~~~~-g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 18 PCGPEAAGTCKETN-SGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp SSCSSSCCEEEECS-SEEEEECCTTEEEEECSSSC
T ss_pred CCcCCCccccccCC-CceEeECCCCCccCCCCCCC
Confidence 79999 9999987 679999999999 9999864
No 105
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.71 E-value=0.019 Score=53.92 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=69.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCC----CeEEEEEcCCCCeEEEEeCCCCc
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKL----NTIESVRHDGRNRQTILSGSDKL 76 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~----~~I~~~~ldG~~~~~i~~~~~~~ 76 (428)
|||++.... .|.+.+.++...+.+.......|.+|++|+. + +||.++... +.|.+.+.++...+.++......
T Consensus 58 l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 58 LFLLDVFEG-NIFKINPETKEIKRPFVSHKANPAAIKIHKD-G-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp EEEEETTTC-EEEEECTTTCCEEEEEECSSSSEEEEEECTT-S-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred EEEEECCCC-EEEEEeCCCCcEEEEeeCCCCCcceEEECCC-C-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence 467776544 7988888866655554334468999999965 5 699988766 68999999988766554421123
Q ss_pred cceeeeecc-ccEEEEEeCC------CCceeeeccCC
Q psy951 77 QHPISLDVF-ENNIYWLARD------TGSLYKQDKFG 106 (428)
Q Consensus 77 ~~p~~l~~~-~~~lYwtD~~------~~~I~~~~~~g 106 (428)
..|.++.+. ++++|+++.. .+.|++.+.++
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 456666654 5688888764 34577766554
No 106
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.70 E-value=0.021 Score=53.44 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=60.1
Q ss_pred cccceeEEeeccCCCEEEEEecCCCe-EEEeeeccccCCce----EEEEeccccceeeeeeccCCeEEEEeCCCCcEEEE
Q psy951 322 DERRIEALDIDPVDEIIYWVDSYDRN-IRRSFMLEAQKGQV----QAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRS 396 (428)
Q Consensus 322 ~~~~~~~l~~d~~~~~lyWtd~~~~~-I~ra~l~g~~~~~~----~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~ 396 (428)
....+.+++++|..++||-++....+ |..-.++.. +.. ...+..-..|.+++++..++.||.++.....|.+.
T Consensus 126 ~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 203 (331)
T 3u4y_A 126 IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD--GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGIL 203 (331)
T ss_dssp CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT--CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCCccceEECCCCCEEEEEecCCCceEEEEEECCC--CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEE
Confidence 34467899999999999999988776 776666541 111 12233445699999999999999999988899999
Q ss_pred EccCcce
Q psy951 397 FMLEAQK 403 (428)
Q Consensus 397 ~~~g~~~ 403 (428)
++.....
T Consensus 204 d~~~~~~ 210 (331)
T 3u4y_A 204 ETQNPEN 210 (331)
T ss_dssp ECSSTTS
T ss_pred ECCCCcc
Confidence 9875443
No 107
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.69 E-value=0.035 Score=52.10 Aligned_cols=62 Identities=10% Similarity=0.038 Sum_probs=47.9
Q ss_pred ceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCC
Q psy951 325 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSY 389 (428)
Q Consensus 325 ~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~ 389 (428)
.+.++++++..+++|-++....+|....+.. .+....+..-..|.+++++..++.||.+...
T Consensus 273 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 273 ESLAVLFNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SCCCEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CCceEEECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 3568999999999999998888888777654 2233334444579999999999999998875
No 108
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.68 E-value=0.00026 Score=66.12 Aligned_cols=102 Identities=7% Similarity=-0.060 Sum_probs=75.9
Q ss_pred eeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEE
Q psy951 317 RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRS 396 (428)
Q Consensus 317 ~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~ 396 (428)
..+..+...+.++++|+..+.|||++...++|++...++ . .+.+......|.+|++|.. ++||+++.+...|.+.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~-~~~~~~~~~~~~~l~~~~d-g~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q-LSPEMHPSHHQNGHCLNKQ-GHLIACSHGLRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C-EEEEESSCSSEEEEEECTT-CCEEEEETTTTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C-eEEEECCCCCcceeeECCC-CcEEEEecCCCeEEEE
Confidence 334467788999999999999999999999999998887 3 4444446678999999985 5699999988889999
Q ss_pred Ec-cCcceeEEEecccCCCCCCCcccccc
Q psy951 397 FM-LEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 397 ~~-~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+. +|+. +.+.......+...|.+++++
T Consensus 96 d~~~g~~-~~~~~~~~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 96 REPGGEW-ESIADSFEGKKLNSPNDVCLA 123 (296)
T ss_dssp CSTTCCE-EEEECEETTEECCCCCCEEEC
T ss_pred cCCCCcE-EEEeeccCCCCCCCCCCEEEC
Confidence 98 5554 444433223344556667665
No 109
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.67 E-value=1.7e-05 Score=54.19 Aligned_cols=36 Identities=14% Similarity=0.376 Sum_probs=30.6
Q ss_pred CCCCCccccCCCcceecCCCCCCCCCCCCCCcccccCcc
Q psy951 142 SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 142 ~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
++|+|.|++.+++|+|.|++|| .+.++ +++|.++++
T Consensus 6 g~C~~~C~n~~gs~~C~C~~Gy-~L~~d--~~tC~dide 41 (51)
T 1kig_L 6 GGCDQFCREERSEVRCSCAHGY-VLGDD--SKSCVSTER 41 (51)
T ss_dssp TSSSSCCCEETTEECCCCCTTE-EECTT--SSCEEECSS
T ss_pred CCcCCEeEcCCCCeEEeCCCCc-EECCC--CCccccCCc
Confidence 4799999999999999999999 66554 688988664
No 110
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.63 E-value=0.025 Score=54.51 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=57.3
Q ss_pred EEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeC----CCCccceeeeecc-----ccEEEEEe--
Q psy951 25 LVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSG----SDKLQHPISLDVF-----ENNIYWLA-- 93 (428)
Q Consensus 25 l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~----~~~~~~p~~l~~~-----~~~lYwtD-- 93 (428)
++.+++..|.+|++++. + +||.++...++|.+++.++.....+... ......|++|++. ++.||.+.
T Consensus 26 ~va~gL~~P~~ia~~pd-G-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 26 TVATGLNSPWGLAPLPG-G-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEECCCSSEEEEEECTT-S-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EeecCCCCceEEEEcCC-C-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 45678999999999975 5 6999998899999998765444443221 1145678899885 57788764
Q ss_pred CCCCceeeeccCC
Q psy951 94 RDTGSLYKQDKFG 106 (428)
Q Consensus 94 ~~~~~I~~~~~~g 106 (428)
....+|.|....+
T Consensus 104 ~~~~~v~R~~~~~ 116 (347)
T 3das_A 104 ASDNRIVRMLYDE 116 (347)
T ss_dssp SSSEEEEEEEBCT
T ss_pred CCCCEEEEEEeCC
Confidence 3456788877664
No 111
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.61 E-value=2.7e-05 Score=53.50 Aligned_cols=39 Identities=28% Similarity=0.710 Sum_probs=30.2
Q ss_pred CCCCCCC----------CCCCCccccCCCcceecCCCCCCCCCCCCCCcccc
Q psy951 135 APNPCSQ----------SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 135 ~~n~C~~----------~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~ 176 (428)
.+|+|.. .+|++.|++.+++|.|.|++|| .+... +.+|.
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy-~~~~d--~~~C~ 51 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGY-ELQED--RHSCQ 51 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTC-EECTT--SSCEE
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCC-eECCC--CCccC
Confidence 4577764 5799999999999999999999 55432 45564
No 112
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.61 E-value=3.3e-05 Score=49.43 Aligned_cols=35 Identities=26% Similarity=0.664 Sum_probs=30.0
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccc
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~ 176 (428)
..++|..++|.+ .|++..++|+|.|++|| .|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~-------~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGF-------EGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTC-------CSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCC-------cCCccC
Confidence 358899899988 89999999999999999 566664
No 113
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.56 E-value=0.00061 Score=64.16 Aligned_cols=104 Identities=12% Similarity=0.046 Sum_probs=77.7
Q ss_pred ceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEE
Q psy951 315 RFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIR 394 (428)
Q Consensus 315 ~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~ 394 (428)
....+..+...+.+..+|+..+.|||+|....+|+|-..+| +.+++......|.|+++|.. ++||+++.+...|.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~~~~~~~~~~~~~gl~~d~d-G~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----TVDVLLDATAFTNGNAVDAQ-QRLVHCEHGRRAIT 110 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----CEEEEEESCSCEEEEEECTT-SCEEEEETTTTEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----CEEEEeCCCCccceeeECCC-CCEEEEECCCCEEE
Confidence 34445678888999999999999999999999999987765 34455455678999999986 46999999888899
Q ss_pred EEEccCcceeEEEecccCCCCCCCcccccc
Q psy951 395 RSFMLEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 395 ~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+.+.+|+. +++.......+...|.+++++
T Consensus 111 ~~~~~g~~-~~~~~~~~~~~~~~~~~i~~d 139 (305)
T 3dr2_A 111 RSDADGQA-HLLVGRYAGKRLNSPNDLIVA 139 (305)
T ss_dssp EECTTSCE-EEEECEETTEECSCCCCEEEC
T ss_pred EECCCCCE-EEEEeccCCCccCCCCCEEEC
Confidence 99998764 344332223344556666665
No 114
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.50 E-value=4.1e-05 Score=53.95 Aligned_cols=35 Identities=23% Similarity=0.531 Sum_probs=29.6
Q ss_pred CCCCCccccCC-CcceecCCCCCCCCCCCCCCcccccCc
Q psy951 142 SPCSHLCLVIP-GGYQCACPENATPKLPGVAEIRCSAAV 179 (428)
Q Consensus 142 ~~C~~~C~~~~-~~~~C~C~~g~~~~~~~~~g~~C~~~~ 179 (428)
++|+|.|++.+ ++|.|.|++|| .|.++ +++|.+..
T Consensus 7 ggC~~~C~n~~~gs~~C~C~~Gy-~L~~D--~~tC~d~~ 42 (59)
T 2wph_E 7 GRCEQFCKNSADNKVVCSCTEGY-RLAEN--QKSCEPAV 42 (59)
T ss_dssp GGCSSEEEECSTTCEEEECCTTE-EECTT--SSCEEESS
T ss_pred CCcCCEeEeCCCCCEEeeCCCCc-EECCC--CCcccCCC
Confidence 47999999999 69999999999 77654 68998754
No 115
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.49 E-value=8.7e-05 Score=73.88 Aligned_cols=60 Identities=30% Similarity=0.727 Sum_probs=44.2
Q ss_pred CCcceecCCCCCCCCCCCCCCcccccCccC----CCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCC
Q psy951 152 PGGYQCACPENATPKLPGVAEIRCSAAVER----PRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 152 ~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~----~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
+++++|.|++|| .|..|+..... ..+ ..+|+|.|+|+|.... .|.|++||+|..||....
T Consensus 260 ~~~~~C~C~~G~-------~G~~C~~~C~~G~~G~~C-~~~C~C~ngg~C~~~~----~C~C~~G~~G~~Ce~~~~ 323 (423)
T 2gy5_A 260 PDPYGCSCATGW-------KGLQCNEACHPGFYGPDC-KLRCSCNNGEMCDRFQ----GCLCSPGWQGLQCEREGI 323 (423)
T ss_dssp TTTTEEECCBTC-------BSGGGCBCCCTTBCSBTT-CCBCCCTTCCEEETTT----EEECCTTCBSTTSCBCSS
T ss_pred CCCCeEEeCCCc-------ccccccCccCCCCcCCcc-cccccCCCCCEecCCC----ceECCCCCcCCCCccCcc
Confidence 467999999999 67888752110 011 1257899999998654 399999999999998643
No 116
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.48 E-value=3.9e-05 Score=80.64 Aligned_cols=72 Identities=21% Similarity=0.507 Sum_probs=51.4
Q ss_pred CCCCCCCCC--ccccCCCcce---ecCCCCCCCCCCCCCCcccccCc--------cCCCCCCCCCCCCCCCEEeeCCCCc
Q psy951 138 PCSQSPCSH--LCLVIPGGYQ---CACPENATPKLPGVAEIRCSAAV--------ERPRPLPRVCQCQNGGMCAESETGD 204 (428)
Q Consensus 138 ~C~~~~C~~--~C~~~~~~~~---C~C~~g~~~~~~~~~g~~C~~~~--------~~~~~~~~~c~C~ngg~C~~~~~g~ 204 (428)
+|..++|.+ .|.+..+.+. |.|++|| .|..|+... ..|...+..-+|.|+|+|..
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy-------~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----- 503 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGW-------LGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----- 503 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTC-------CSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-----
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCc-------cCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-----
Confidence 566777776 7876667777 9999999 678886443 11222111124899999973
Q ss_pred eEecCC----CCCccCccCCC
Q psy951 205 LTCNCR----QDFAGTFCENY 221 (428)
Q Consensus 205 ~~C~C~----~gy~G~~Ce~~ 221 (428)
+.|.|+ +||.|..||..
T Consensus 504 g~C~C~~~~~~Gy~G~~Ce~~ 524 (690)
T 3fcs_B 504 GQCVCHSSDFGKITGKYCECD 524 (690)
T ss_dssp SSEEECCCSSCCCBSTTSCBC
T ss_pred CeeEeecCCCCCeeCCCcCcc
Confidence 479999 99999999853
No 117
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=97.47 E-value=8.7e-05 Score=71.28 Aligned_cols=51 Identities=31% Similarity=0.782 Sum_probs=32.3
Q ss_pred cceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 154 GYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 154 ~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
.+.|.|++|| .|..|+... |.. +|.|+|+|.. .+.|.|++||.|..|+...
T Consensus 164 ~~~C~C~~G~-------~G~~C~~~~--C~~-----~C~~~G~C~~----~~~C~C~~G~~G~~C~~~~ 214 (324)
T 2ygq_A 164 RRICECPDGF-------HGPHCEKAL--CTP-----RCMNGGLCVT----PGFCICPPGFYGVNCDKAN 214 (324)
T ss_dssp TSCEECCTTE-------ESSSSCEES--SSS-----CCCTTCEECS----SCCEECCTTCBTTTTCBCC
T ss_pred CCeEECCCCC-------cCCCCCCCC--CCC-----CCCCCCEEcC----CCEEeCCCCccCCCcccCc
Confidence 4788888888 567776421 111 4667777754 2457777777777776543
No 118
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.44 E-value=4.5e-05 Score=52.74 Aligned_cols=38 Identities=26% Similarity=0.589 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCC--ccc-----cCCCcceecCCCCCCCCCCCCCCcccccCc
Q psy951 135 APNPCSQSPCSH--LCL-----VIPGGYQCACPENATPKLPGVAEIRCSAAV 179 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~-----~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~ 179 (428)
..|+|.++||+| +|. +..++|+|.|++|| .|..|+...
T Consensus 7 ~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~-------~G~~CE~~v 51 (55)
T 3u7u_G 7 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEF-------TGDRCQNYV 51 (55)
T ss_dssp ECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTE-------ESTTSCEEC
T ss_pred cCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCC-------cCCCcCccC
Confidence 468999999999 994 55679999999999 688887543
No 119
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.42 E-value=3.7e-05 Score=52.88 Aligned_cols=36 Identities=28% Similarity=0.637 Sum_probs=30.3
Q ss_pred CCCCCccccCCC-cceecCCCCCCCCCCCCCCcccccCcc
Q psy951 142 SPCSHLCLVIPG-GYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 142 ~~C~~~C~~~~~-~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
++|+|.|++.++ +|+|.|++|| .+.++ +++|.+.++
T Consensus 7 ggC~~~C~n~~ggs~~C~C~~Gy-~L~~D--g~tC~d~de 43 (53)
T 2bz6_L 7 GGCEQYCSDHTGTKRSCRCHEGY-SLLAD--GVSCTPTVE 43 (53)
T ss_dssp GGCSSEEEEETTTEEEEECCTTE-EECTT--SSCEEECSS
T ss_pred CCcCCEeEcCCCCCEEeeCCCCC-EECCC--CCcccCCcc
Confidence 479999999998 6999999999 77654 689988764
No 120
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.42 E-value=0.0078 Score=60.38 Aligned_cols=74 Identities=11% Similarity=0.226 Sum_probs=51.3
Q ss_pred CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCC------CCccceeeeecc-----cc
Q psy951 19 GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGS------DKLQHPISLDVF-----EN 87 (428)
Q Consensus 19 G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~------~~~~~p~~l~~~-----~~ 87 (428)
|-..+ ++.+++..|.+|++++. + +||.++...++|.+++.++....++..-. .....+++|++. ++
T Consensus 16 gf~~~-~~a~~l~~P~~~a~~pd-G-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g 92 (454)
T 1cru_A 16 NFDKK-VILSNLNKPHALLWGPD-N-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP 92 (454)
T ss_dssp TSCEE-EEECCCSSEEEEEECTT-S-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSC
T ss_pred CeEEE-EEECCCCCceEEEEcCC-C-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCC
Confidence 43444 44568999999999975 5 69999988789999987533344443211 024456788887 78
Q ss_pred EEEEEeCC
Q psy951 88 NIYWLARD 95 (428)
Q Consensus 88 ~lYwtD~~ 95 (428)
.||.++..
T Consensus 93 ~lYv~~s~ 100 (454)
T 1cru_A 93 YIYISGTF 100 (454)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 99999853
No 121
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.42 E-value=0.087 Score=49.60 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=57.7
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Ee-ccccceeeeeeccCCeEEEEeCCCCcEEEEEccC
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--IS-DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLE 400 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~-~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g 400 (428)
..+.+++++|..++||.++....+|..-.++.. +..+.+ +. .-..|.+++++..++.||.++...+.|.+-.+|.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 468899999999999999988887776666531 223333 22 3457999999999999999999888888886653
No 122
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.38 E-value=9.7e-05 Score=60.32 Aligned_cols=35 Identities=37% Similarity=0.925 Sum_probs=29.0
Q ss_pred CCCCCCCEEeeCC--CCceEecCCCCCccCccCCCCC
Q psy951 189 CQCQNGGMCAESE--TGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 189 c~C~ngg~C~~~~--~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
|+|+|||+|.+.. .+.+.|.|++||+|..||+...
T Consensus 1 ~pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~ 37 (122)
T 2fd6_A 1 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 37 (122)
T ss_dssp CCCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS
T ss_pred CCCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc
Confidence 5899999998863 3434999999999999998654
No 123
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.35 E-value=0.096 Score=48.63 Aligned_cols=98 Identities=12% Similarity=0.050 Sum_probs=66.3
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--EeccccceeeeeeccCCeEEEEeCCCCcEEEEEccC
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLE 400 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g 400 (428)
...+.+++++|..++||.++.....|..-.++... ...+.+ +..-..|.+++++..++.||.+....+.|.+-.+|.
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDG-SVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS-CCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC-CceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 44677899999999999999888878777776211 223333 333344999999999999999998878888886663
Q ss_pred --cceeEEEecccCCCCCCCcccccc
Q psy951 401 --AQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 401 --~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
...+.+.. +.. -..|.++++.
T Consensus 309 ~~g~~~~~~~--~~~-g~~p~~i~~~ 331 (343)
T 1ri6_A 309 EQGLLHEKGR--YAV-GQGPMWVVVN 331 (343)
T ss_dssp TTTEEEEEEE--EEC-SSSCCEEEEE
T ss_pred CCceeeEccc--ccc-CCCCeeEEEE
Confidence 22233321 112 2567777764
No 124
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.32 E-value=0.12 Score=49.05 Aligned_cols=76 Identities=7% Similarity=0.139 Sum_probs=58.0
Q ss_pred ccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Ee----ccccceeeeeeccCCeEEEEeCC-CCcE
Q psy951 321 SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--IS----DERRIEALDIDPVDEIIYWVDSY-DRNI 393 (428)
Q Consensus 321 ~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~----~~~~p~glavD~~~~~lYwtd~~-~~~I 393 (428)
.....|++++|+|..++||-++....+|....++. +..+.+ +. ....|.+++++..++.||.++.+ .+.|
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 33456889999999999999998777777666653 222222 11 34568899999999999999998 8889
Q ss_pred EEEEcc
Q psy951 394 RRSFML 399 (428)
Q Consensus 394 ~~~~~~ 399 (428)
.+-+++
T Consensus 285 ~v~~~~ 290 (361)
T 3scy_A 285 AIFKVD 290 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 998886
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.31 E-value=0.13 Score=49.19 Aligned_cols=80 Identities=11% Similarity=0.109 Sum_probs=59.1
Q ss_pred ccceeEEeeccCCCEEEEEec--CCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEccC
Q psy951 323 ERRIEALDIDPVDEIIYWVDS--YDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLE 400 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~--~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g 400 (428)
...+.+++++|..++||-+.. ...+|+.-.+.. .+....+..-..|.+++++..++.||.+......|.+-++..
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT---NKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT---TEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCccceEECCCCCEEEEEecCcCCCcEEEEECCC---CeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 346778999999999999876 566777766654 323333444456889999999999999988888999999875
Q ss_pred cceeE
Q psy951 401 AQKGQ 405 (428)
Q Consensus 401 ~~~~~ 405 (428)
.....
T Consensus 276 ~~~~~ 280 (391)
T 1l0q_A 276 NTITA 280 (391)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 44433
No 126
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.30 E-value=0.017 Score=55.85 Aligned_cols=68 Identities=13% Similarity=0.163 Sum_probs=52.6
Q ss_pred ccccccceeEEeeccCCCEEEEEecCCCeEEEeeecccc-CCceEEEEeccccceeeeeeccCCeEEEEe
Q psy951 319 VISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQ-KGQVQAVISDERRIEALDIDPVDEIIYWVD 387 (428)
Q Consensus 319 ~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~-~~~~~~i~~~~~~p~glavD~~~~~lYwtd 387 (428)
+.+++..|-||+++|..++||.+|...++|++-.+++.. -...+++ .--..|+|+++|..+++||.+.
T Consensus 216 ~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 216 VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 457788999999999999999999999999999997421 1122233 4346899999998667887755
No 127
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.24 E-value=0.0078 Score=56.57 Aligned_cols=103 Identities=15% Similarity=0.050 Sum_probs=72.3
Q ss_pred CEEEeeCCC-CeEEEEEc-CCCCcEEEEe-CCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEE-e-----
Q psy951 1 MFWAETGAS-PRIESAWM-DGSHRRSLVM-TGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTIL-S----- 71 (428)
Q Consensus 1 lyWtd~~~~-~~I~~a~~-DG~~~~~l~~-~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~-~----- 71 (428)
||.+|.+.. .+|.+.+. +|+- +.+.. .....|+|++++ ..+ ++|.+|...+.|.+++.++...++.. .
T Consensus 85 l~vad~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~g~~~~-~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 85 LVATGWNADSIPVVSLVKSDGTV-ETLLTLPDAIFLNGITPL-SDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCE-EEEEECTTCSCEEEEEES-SSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred EEEEeccCCcceEEEEcCCCCeE-EEEEeCCCccccCccccc-CCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCcccc
Confidence 467776543 24777654 4543 33333 356789999985 456 89999998999999998865333321 1
Q ss_pred --CCCCccceeeeeccccEEEEEeCCCCceeeeccCC
Q psy951 72 --GSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 72 --~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g 106 (428)
....+..|-+|+..+++||++|..+++|++.+.++
T Consensus 162 ~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 162 SNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred ccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 11245678888777889999999999999999874
No 128
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.23 E-value=0.14 Score=48.12 Aligned_cols=99 Identities=7% Similarity=0.050 Sum_probs=65.8
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Eec-------cccceeeeeeccCCeEEEEeCCCCcEE
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--ISD-------ERRIEALDIDPVDEIIYWVDSYDRNIR 394 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~~-------~~~p~glavD~~~~~lYwtd~~~~~I~ 394 (428)
..|.+++++|..++||-++....+|....++.. .+....+ +.. ...|.+++++..++.||.++.+.+.|.
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA 265 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence 467889999999999999988887777666642 1222222 111 145889999999999999999888999
Q ss_pred EEEccCcceeEEEecccCCCCCCCcccccc
Q psy951 395 RSFMLEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 395 ~~~~~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+-+++.....+.+... ...-..|++++++
T Consensus 266 v~~~~~~g~~~~~~~~-~~~~~~~~~~~~s 294 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQI-STEGDFPRDFDLD 294 (347)
T ss_dssp EEEECGGGCEEEEEEE-ECSSSCCCEEEEC
T ss_pred EEEECCCCcEEEeEEE-ecCCCCcCeEEEC
Confidence 9998733222222111 2223456666654
No 129
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.22 E-value=0.093 Score=48.40 Aligned_cols=67 Identities=12% Similarity=0.095 Sum_probs=52.8
Q ss_pred eeEEEcCCCCCEEEEEECCCCeEEEEEcCCCC-eEEEEeCCCCccceeeeeccccEEEEEeCCCCceeeeccCC
Q psy951 34 TGLSVDAAMDHTLYWVDSKLNTIESVRHDGRN-RQTILSGSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 34 ~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~-~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g 106 (428)
.||++| .+ +||-+....++|.++++.... .+.++. ......++++.+++||...|..+.++..+...
T Consensus 58 qGL~~~--~~-~Ly~stG~~g~v~~iD~~Tgkv~~~~l~---~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 58 QGLVFH--QG-HFFESTGHQGTLRQLSLESAQPVWMERL---GNIFAEGLASDGERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EEEEEE--TT-EEEEEETTTTEEEECCSSCSSCSEEEEC---TTCCEEEEEECSSCEEEEESSSCEEEEEETTT
T ss_pred ceEEEE--CC-EEEEEcCCCCEEEEEECCCCcEEeEECC---CCcceeEEEEeCCEEEEEEccCCEEEEEECCc
Confidence 799998 46 999999999999999997543 344433 23445669999999999999999999998764
No 130
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=97.18 E-value=0.00021 Score=48.32 Aligned_cols=32 Identities=25% Similarity=0.652 Sum_probs=26.0
Q ss_pred CCCCCCEEee-CCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAE-SETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~-~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
.|.| |+|.. ...+.+.|.|++||+|.+||...
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~~ 47 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCERVD 47 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTCEEC
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCCeec
Confidence 6999 78953 33467999999999999999753
No 131
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.15 E-value=0.13 Score=47.29 Aligned_cols=98 Identities=6% Similarity=0.118 Sum_probs=67.6
Q ss_pred eeEEeeccCCCEEEEEecCCC-eEEEeeeccccC-CceEEEEe-------ccccceeeeeeccCCeEEEEeCCCCcEEEE
Q psy951 326 IEALDIDPVDEIIYWVDSYDR-NIRRSFMLEAQK-GQVQAVIS-------DERRIEALDIDPVDEIIYWVDSYDRNIRRS 396 (428)
Q Consensus 326 ~~~l~~d~~~~~lyWtd~~~~-~I~ra~l~g~~~-~~~~~i~~-------~~~~p~glavD~~~~~lYwtd~~~~~I~~~ 396 (428)
..||+||+..+.||=+.-... .|++.. |... ...+++-. .+..+.||++|..+++||......+.+-..
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~ 200 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEV 200 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEE
Confidence 458999999988888765544 788876 3111 12333311 355789999999999999999999999999
Q ss_pred EccCcceeEEEecc----cCCCCCCCccccccc
Q psy951 397 FMLEAQKGQVQAGA----SRHQNGVPASSQRNL 425 (428)
Q Consensus 397 ~~~g~~~~~l~~~~----~~~~~~~p~~~~~~~ 425 (428)
+.+|.-+..+-=.. +.+-..-|-+||++-
T Consensus 201 d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 201 TLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp CTTCCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred cCCCCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence 99998666554222 122234566676653
No 132
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.13 E-value=0.0002 Score=71.28 Aligned_cols=65 Identities=23% Similarity=0.603 Sum_probs=45.1
Q ss_pred CCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCccCC----CCCCCCC----CCCCCCEEeeCCCCceEecCCCC
Q psy951 143 PCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERP----RPLPRVC----QCQNGGMCAESETGDLTCNCRQD 212 (428)
Q Consensus 143 ~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~----~~~~~~c----~C~ngg~C~~~~~g~~~C~C~~g 212 (428)
+|++ .|.+ ..++|.|++|| .|..|+...... .+. .+| .|.+++.|.. +.+.|.|++|
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G~-------~G~~Ce~~C~~g~~g~~C~-~~C~~~~~C~~~g~C~~---~~~~C~C~~G 270 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPGF-------MGRTCEKACELHTFGRTCK-ERCSGQEGCKSYVFCLP---DPYGCSCATG 270 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTTE-------ESTTSCEECCTTEESTTSC-EECCSTTTTTTCCEEET---TTTEEECCBT
T ss_pred CCCCCCEEEC--CCCcEeCCCCc-------cCCCcccccCCCCCCCCcC-ccCCCCCCCCCCCEECC---CCCeEEeCCC
Confidence 5655 6765 46799999999 678887531110 000 122 4788889953 4689999999
Q ss_pred CccCccCC
Q psy951 213 FAGTFCEN 220 (428)
Q Consensus 213 y~G~~Ce~ 220 (428)
|.|..|+.
T Consensus 271 ~~G~~C~~ 278 (423)
T 2gy5_A 271 WKGLQCNE 278 (423)
T ss_dssp CBSGGGCB
T ss_pred cccccccC
Confidence 99999986
No 133
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.13 E-value=0.099 Score=49.81 Aligned_cols=96 Identities=8% Similarity=-0.052 Sum_probs=69.8
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe------cccccee-eeeeccCCeEEEEeCCCCcEEEE
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS------DERRIEA-LDIDPVDEIIYWVDSYDRNIRRS 396 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~------~~~~p~g-lavD~~~~~lYwtd~~~~~I~~~ 396 (428)
..+-||+|+|..+.|+=.+. .++|.|..+... ...++-++ .+..|+| |+++..++.||.++.....+.+.
T Consensus 185 ~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p--v~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~ 261 (334)
T 2p9w_A 185 PGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP--YAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFR 261 (334)
T ss_dssp CSCSEEEEETTTTEEEEESS-SSSEEEEECSSS--SCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred cCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC--cceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEE
Confidence 34669999999999999998 889999998842 22123222 4678999 58898888889999887788888
Q ss_pred EccCcceeEEEecccCCCCCCCcccccc
Q psy951 397 FMLEAQKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 397 ~~~g~~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
+.|| -+.--+.+....++. +.++++.
T Consensus 262 S~Dg-W~sa~~~g~~~~~~~-~~g~tt~ 287 (334)
T 2p9w_A 262 SWDN-WKSANIKKTKRSELQ-NSGFTAV 287 (334)
T ss_dssp CSST-TSEEEEEEEECGGGG-SSCEEEE
T ss_pred CCCC-cceeEEeeeecCccc-cCceeEE
Confidence 8899 555444455455444 6666554
No 134
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.10 E-value=0.0003 Score=48.28 Aligned_cols=37 Identities=24% Similarity=0.550 Sum_probs=30.0
Q ss_pred CCCCCCC---CCCC--ccc--cCCCcceecCCCCCCCCCCCCCCcccccCc
Q psy951 136 PNPCSQS---PCSH--LCL--VIPGGYQCACPENATPKLPGVAEIRCSAAV 179 (428)
Q Consensus 136 ~n~C~~~---~C~~--~C~--~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~ 179 (428)
+++|..+ +|.| +|+ +..++|.|.|++|| .|..|+...
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~-------~G~~Ce~~~ 46 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGY-------SGDRCQTRD 46 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTC-------CSSSSCCCS
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCC-------cCCcCCccC
Confidence 4678775 8988 899 77789999999999 678887543
No 135
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=97.09 E-value=0.00033 Score=67.23 Aligned_cols=50 Identities=30% Similarity=0.607 Sum_probs=34.0
Q ss_pred cceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 154 GYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 154 ~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
.+.|.|++|| .|..|+... |. .+|.|+|+|... ++|.|++||+|..|+..
T Consensus 196 ~~~C~C~~G~-------~G~~C~~~~--C~-----~~C~~~G~C~~~----~~C~C~~G~~G~~C~~~ 245 (324)
T 2ygq_A 196 PGFCICPPGF-------YGVNCDKAN--CS-----TTCFNGGTCFYP----GKCICPPGLEGEQCEIS 245 (324)
T ss_dssp SCCEECCTTC-------BTTTTCBCC--CS-----SCCCSSCCBSCS----SCBCCCTTCCTTTTC--
T ss_pred CCEEeCCCCc-------cCCCcccCc--CC-----CCCCCCCeeCCC----CeeeCCCCccCCCCCcC
Confidence 4789999999 567786431 11 257788888642 56888888888888754
No 136
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=97.09 E-value=0.00032 Score=47.28 Aligned_cols=31 Identities=26% Similarity=0.649 Sum_probs=25.8
Q ss_pred CCCCCCEEeeCC-CCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAESE-TGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~-~g~~~C~C~~gy~G~~Ce~~ 221 (428)
.|.|| +|.... .+.+.|.|++||+|.+||..
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 68897 998643 35699999999999999874
No 137
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=97.07 E-value=0.00035 Score=58.74 Aligned_cols=37 Identities=35% Similarity=0.917 Sum_probs=29.3
Q ss_pred CCCCCCCCCEEeeCC-CCce-EecCCCCCccCccCCCCC
Q psy951 187 RVCQCQNGGMCAESE-TGDL-TCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 187 ~~c~C~ngg~C~~~~-~g~~-~C~C~~gy~G~~Ce~~~~ 223 (428)
..|+|+|||+|.... .+.+ .|.|++||.|.+|++...
T Consensus 11 ~~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~ 49 (145)
T 2i9a_A 11 SNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 49 (145)
T ss_dssp -CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS
T ss_pred CCCCCCCCCCcCCCccccCCccccCCCCCCCCceecccc
Confidence 567999999997752 1335 899999999999998754
No 138
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.07 E-value=5.6e-05 Score=53.48 Aligned_cols=37 Identities=27% Similarity=0.741 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCC----ccccCCCcceecCCCCCCCCCCCCC-CcccccC
Q psy951 135 APNPCSQSPCSH----LCLVIPGGYQCACPENATPKLPGVA-EIRCSAA 178 (428)
Q Consensus 135 ~~n~C~~~~C~~----~C~~~~~~~~C~C~~g~~~~~~~~~-g~~C~~~ 178 (428)
..++|.++||.+ +|++.+++|.|.|++|| . |..|+..
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy-------~~G~~C~~~ 51 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGY-------RISLDGTGN 51 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTE-------EEEECSSSC
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCCCC-------ccCCCCCCC
Confidence 568898889986 69999999999999999 5 6777643
No 139
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=97.05 E-value=0.00049 Score=46.40 Aligned_cols=30 Identities=30% Similarity=0.801 Sum_probs=24.6
Q ss_pred CCCCCCEEee-CCCCceEecCCCCCccCccCC
Q psy951 190 QCQNGGMCAE-SETGDLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 190 ~C~ngg~C~~-~~~g~~~C~C~~gy~G~~Ce~ 220 (428)
.|.|| +|.. ...+.+.|.|+.||+|.+||.
T Consensus 19 yC~nG-~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 19 FCIHG-ECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp TCSSS-EEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred cCCCC-EEEEecCCCCeeEECCCCcccccccc
Confidence 68885 9973 334579999999999999986
No 140
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.04 E-value=0.00039 Score=73.05 Aligned_cols=61 Identities=25% Similarity=0.572 Sum_probs=43.3
Q ss_pred CCCC--ccccCCCcceecCCCCCCCCCCCCCCcccc--cCccCCCCCCCCCCCCCCCEEeeCCCCceEecC-CCCCccCc
Q psy951 143 PCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCS--AAVERPRPLPRVCQCQNGGMCAESETGDLTCNC-RQDFAGTF 217 (428)
Q Consensus 143 ~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~--~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C-~~gy~G~~ 217 (428)
+|++ .|.. +.|.|++|| .|..|+ .....|... ...+|.++|+|.. + .|.| ++||.|..
T Consensus 535 ~C~~~G~C~~----g~C~C~~Gy-------~G~~CeC~~~~~~C~~~-~g~~C~~~G~C~~---g--~C~C~~~Gy~G~~ 597 (690)
T 3fcs_B 535 MCSGHGQCSC----GDCLCDSDW-------TGYYCNCTTRTDTCMSS-NGLLCSGRGKCEC---G--SCVCIQPGSYGDT 597 (690)
T ss_dssp BGGGSEEEET----TEEEECTTE-------ESSSSCEECCCTTTBCT-TSSBTSSSCEEET---T--EEECCSTTCBSTT
T ss_pred CCCCCCEecC----CeeECcCCC-------cCCCCccCCCCCcccCC-CCCCCCCCCEEeC---C--EEECCCCCccCCC
Confidence 4544 5543 799999999 678887 222223221 1246999999974 2 7999 99999999
Q ss_pred cCC
Q psy951 218 CEN 220 (428)
Q Consensus 218 Ce~ 220 (428)
|+.
T Consensus 598 Ce~ 600 (690)
T 3fcs_B 598 CEK 600 (690)
T ss_dssp SCB
T ss_pred cCc
Confidence 998
No 141
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.04 E-value=0.00021 Score=47.51 Aligned_cols=35 Identities=26% Similarity=0.662 Sum_probs=28.3
Q ss_pred CCCCCC---CCCCC-ccccCC--CcceecCCCCCCCCCCCCCCccccc
Q psy951 136 PNPCSQ---SPCSH-LCLVIP--GGYQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 136 ~n~C~~---~~C~~-~C~~~~--~~~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
+++|.. ++|.| +|.... ++|.|.|++|| .|.+|+.
T Consensus 3 i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gy-------tG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGY-------TGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSSEEEEEETTTTEEEEEECTTC-------SSTTSCC
T ss_pred cccCCCCCCCCCCCCEeeccCCCCCEEEECCCCC-------ccCCCCc
Confidence 467876 78888 898754 68999999999 6788864
No 142
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.03 E-value=0.2 Score=46.10 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=51.3
Q ss_pred eeEEEcCCCCCEEEEEECCC--CeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEEEEEeCCCCceeeeccCCC
Q psy951 34 TGLSVDAAMDHTLYWVDSKL--NTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFGR 107 (428)
Q Consensus 34 ~glavD~~~~~~lYW~d~~~--~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g~ 107 (428)
.||+++ .+ +||-+.... ++|.++++......--+... ......+|++.+++||..+|..+.++..+....
T Consensus 46 qGL~~~--~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~ 117 (262)
T 3nol_A 46 EGFFYR--NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEE--TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTC
T ss_pred ceEEEE--CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccC
Confidence 899998 46 899998654 48999999755432222221 233446689999999999999999999987643
No 143
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.02 E-value=0.24 Score=47.12 Aligned_cols=82 Identities=11% Similarity=0.082 Sum_probs=60.9
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeC--CCCcEEEEEccC
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDS--YDRNIRRSFMLE 400 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~--~~~~I~~~~~~g 400 (428)
...+.+++++|..++||.+...+.+|+.-.+.. ......+..-..|.+++++..++.||.+.. ....|.+-++..
T Consensus 157 ~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 157 GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT---NSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---CeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 345778999999999999988888887777654 323333444457899999999999999886 667899988876
Q ss_pred cceeEEE
Q psy951 401 AQKGQVQ 407 (428)
Q Consensus 401 ~~~~~l~ 407 (428)
......+
T Consensus 234 ~~~~~~~ 240 (391)
T 1l0q_A 234 NKITARI 240 (391)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 5544444
No 144
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.00 E-value=0.00029 Score=46.56 Aligned_cols=35 Identities=20% Similarity=0.416 Sum_probs=27.5
Q ss_pred CCCCCC---CCCC--ccc--cCCCcceecCCCCCCCCCCCCCCcccccC
Q psy951 137 NPCSQS---PCSH--LCL--VIPGGYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 137 n~C~~~---~C~~--~C~--~~~~~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
++|..+ +|.| +|. +..++|.|.|++|| .|..|+..
T Consensus 1 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~-------~G~~Ce~~ 42 (45)
T 1a3p_A 1 PGXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGY-------SGDRCQTR 42 (45)
T ss_dssp CCCTTCCSSCCSSSCEEEECTTTSSEEEECCTTE-------ETTTTCEE
T ss_pred CCcccCCCCCCCCCCEEEeecCCCCEEEEcCCCC-------cCCcCCcc
Confidence 467666 8887 897 56689999999999 67888643
No 145
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.96 E-value=0.00052 Score=57.85 Aligned_cols=43 Identities=28% Similarity=0.631 Sum_probs=29.6
Q ss_pred cccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 173 IRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 173 ~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
..|.+.+++. . .+|.|+|+|++.. +.|.|.|++||+|..|+..
T Consensus 43 ~~c~dideC~-~----~pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~~ 85 (146)
T 1x7a_L 43 KQYVDGDQCE-P----NPCLNGGLCKDDI-NSYECWCQVGFEGKNCELD 85 (146)
T ss_dssp -------CCS-S----CSSCTTCEEEECS-SCEEEECCSSEESTTTCEE
T ss_pred ccCCCcCcCC-C----CCCCCCCEeECCC-CCEEEecCCCCcCCcCCCC
Confidence 3566555432 2 2799999999987 5799999999999999865
No 146
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.95 E-value=0.0034 Score=58.41 Aligned_cols=104 Identities=12% Similarity=0.013 Sum_probs=70.7
Q ss_pred ceeeccccccceeEEeeccCCCEEEEE-------ecCCCeEEEeeeccccCCceEEEEe-----ccccceeeeeeccCCe
Q psy951 315 RFRDVISDERRIEALDIDPVDEIIYWV-------DSYDRNIRRSFMLEAQKGQVQAVIS-----DERRIEALDIDPVDEI 382 (428)
Q Consensus 315 ~~~~~i~~~~~~~~l~~d~~~~~lyWt-------d~~~~~I~ra~l~g~~~~~~~~i~~-----~~~~p~glavD~~~~~ 382 (428)
+...+..++..|.++++| .++.|||+ +....+|++..... .+...+.. ....|.++++|..+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~i~~~~~~g~ 84 (314)
T 1pjx_A 9 LFTKVTEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKT---GKKTVICKPEVNGYGGIPAGCQCDRDANQ 84 (314)
T ss_dssp CCEEEECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTT---CCEEEEECCEETTEECCEEEEEECSSSSE
T ss_pred hHhhhhccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCC---CcEEEEEecccCCCCCCCceEEEecCCCc
Confidence 344456788899999999 56789999 77778898887543 23333322 2367999999987689
Q ss_pred EEEEeCCCCcEEEEEccCcceeEE-EecccCCCCCCCcccccc
Q psy951 383 IYWVDSYDRNIRRSFMLEAQKGQV-QAGASRHQNGVPASSQRN 424 (428)
Q Consensus 383 lYwtd~~~~~I~~~~~~g~~~~~l-~~~~~~~~~~~p~~~~~~ 424 (428)
||+++.+. .|.+.+.+|+.+ .+ .......+...|.+++++
T Consensus 85 l~v~~~~~-~l~~~d~~g~~~-~~~~~~~~~~~~~~~~~i~~d 125 (314)
T 1pjx_A 85 LFVADMRL-GLLVVQTDGTFE-EIAKKDSEGRRMQGCNDCAFD 125 (314)
T ss_dssp EEEEETTT-EEEEEETTSCEE-ECCSBCTTSCBCBCCCEEEEC
T ss_pred EEEEECCC-CEEEEeCCCCEE-EEEeccCCCccccCCcCEEEC
Confidence 99999865 688888885432 22 221112344567777765
No 147
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.92 E-value=0.00039 Score=60.19 Aligned_cols=29 Identities=41% Similarity=1.066 Sum_probs=24.6
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.|||.|+. .-+|.|+.||.|..|+...
T Consensus 154 ~C~ngG~Cv~----P~~C~C~~Gw~G~~C~~~~ 182 (188)
T 2ygo_A 154 GCRNGGFCNE----RRICECPDGFHGPHCEGTK 182 (188)
T ss_dssp CCCTTCEECT----TSCEECCTTCBTTTTCBC-
T ss_pred CCCCCCEeCC----CCcccCcCCCCCCCCcCCc
Confidence 7999999985 3479999999999999854
No 148
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.91 E-value=0.00033 Score=72.11 Aligned_cols=33 Identities=30% Similarity=0.748 Sum_probs=28.5
Q ss_pred CCCCCCEEeeCCCCceEecCC-CCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCR-QDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~-~gy~G~~Ce~~~ 222 (428)
+|+|||+|.....+.|.|.|+ +||+|..||...
T Consensus 8 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp CCCTTCEEEEEETTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCEeeCCCCCCeEEecCCCCccCCCCCCch
Confidence 899999999644357999999 999999999853
No 149
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.86 E-value=0.0004 Score=71.32 Aligned_cols=33 Identities=24% Similarity=0.692 Sum_probs=29.1
Q ss_pred CCCCCCEEee-CCCCceEecCC-CCCccCccCCCCC
Q psy951 190 QCQNGGMCAE-SETGDLTCNCR-QDFAGTFCENYTG 223 (428)
Q Consensus 190 ~C~ngg~C~~-~~~g~~~C~C~-~gy~G~~Ce~~~~ 223 (428)
+|+|||+|.. .. +.|.|.|+ +||+|..||....
T Consensus 9 PC~ngG~C~~~~~-~~y~C~C~~~G~~G~~Ce~~~~ 43 (553)
T 1q4g_A 9 PCQHQGICVRFGL-DRYQCDCTRTGYSGPNCTIPEI 43 (553)
T ss_dssp CCCTTCEEEEETT-TEEEEECTTSSEETTTTCEECH
T ss_pred CCCCCCCcCCCCC-CceEeeCCCCCcCCCCCCCCch
Confidence 7999999998 55 67999999 9999999998553
No 150
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.71 E-value=0.00024 Score=60.98 Aligned_cols=57 Identities=23% Similarity=0.427 Sum_probs=35.5
Q ss_pred CcceecCCC--CCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCc
Q psy951 153 GGYQCACPE--NATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTF 217 (428)
Q Consensus 153 ~~~~C~C~~--g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~ 217 (428)
++|.|.|++ || ...+. +..|.+++++.. . +-+|.| ++|++.. |+|+|.|++||+|..
T Consensus 98 ~~y~C~C~~g~G~-~~~~~--~~~c~dideC~~-~--~~~C~~-g~C~n~~-gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 98 SEYKILCPGGEGF-RPNPI--TVILEDIDECQE-L--PGLCQG-GKCINTF-GSFQCRCPTGYYLNE 156 (162)
T ss_dssp HHHHHHCTTCTTE-EECTT--TCCEEECCHHHH-C--GGGGBT-SEEEECS-SCEEEECCTTCCBCT
T ss_pred CCceeECCCCCCc-ccCCC--CCccCccccccC-C--CCCcCC-CEeEcCC-CCEEeeCCCCccCCC
Confidence 456666665 55 22211 245666554321 1 124766 6999987 689999999999753
No 151
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.68 E-value=0.023 Score=53.82 Aligned_cols=94 Identities=19% Similarity=0.235 Sum_probs=66.7
Q ss_pred CeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcC---C-C--CeEEEEeCCCCccceeeee
Q psy951 10 PRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHD---G-R--NRQTILSGSDKLQHPISLD 83 (428)
Q Consensus 10 ~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ld---G-~--~~~~i~~~~~~~~~p~~l~ 83 (428)
.+|.+.+ +|+.+. + ......|+||++++..+ .|||++...+.|.+.+++ | . +++++.........|.++.
T Consensus 161 ~~l~~~~-~g~~~~-~-~~~~~~~~~i~~s~dg~-~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~ 236 (326)
T 2ghs_A 161 GSIYHVA-KGKVTK-L-FADISIPNSICFSPDGT-TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSV 236 (326)
T ss_dssp EEEEEEE-TTEEEE-E-EEEESSEEEEEECTTSC-EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEE
T ss_pred eEEEEEe-CCcEEE-e-eCCCcccCCeEEcCCCC-EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeE
Confidence 3688887 664332 2 23456899999998888 899999999999999986 4 2 2345543211245677777
Q ss_pred cc-ccEEEEEeCCCCceeeeccCCC
Q psy951 84 VF-ENNIYWLARDTGSLYKQDKFGR 107 (428)
Q Consensus 84 ~~-~~~lYwtD~~~~~I~~~~~~g~ 107 (428)
+. +++||.+++..+.|.+.+.+|.
T Consensus 237 ~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 237 CDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp ECTTSCEEEEEETTTEEEEECTTCC
T ss_pred ECCCCCEEEEEeCCCEEEEECCCCC
Confidence 65 5678888887788999988643
No 152
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.64 E-value=0.00077 Score=54.17 Aligned_cols=55 Identities=25% Similarity=0.443 Sum_probs=37.3
Q ss_pred CCCCCC--CCCCCccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCC
Q psy951 136 PNPCSQ--SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESE 201 (428)
Q Consensus 136 ~n~C~~--~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~ 201 (428)
.++|.. .+|++.|++..++|+|.|++|| .+... ++.|.+..+ .+|.+++.|+...
T Consensus 54 ~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~-~~~~~--g~~C~~~~~--------~pC~~~~~~i~~~ 110 (114)
T 1aut_L 54 FLNCSLDNGGCTHYCLEEVGWRRCSCAPGY-KLGDD--LLQCHPAVK--------FPCGRPWKRMEKK 110 (114)
T ss_dssp SSSSSSGGGGCSSEEEECSSSEEEECCTTE-EECTT--SSCEEECSS--------SCTTCCC------
T ss_pred CCcCcCCCCCCCCEeECCCCCEEeECCCCe-eECCC--CCccCcCcc--------cCCCCCCccCCCC
Confidence 357874 4799999999999999999999 44332 578876543 2688888887543
No 153
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.60 E-value=0.015 Score=55.65 Aligned_cols=63 Identities=11% Similarity=0.072 Sum_probs=49.6
Q ss_pred ceeEEeeccCCCEEEEEecCCCeEEEeee-ccccCCceEEEEe--ccccceeeeeeccCCeEEEEeCCCCcE
Q psy951 325 RIEALDIDPVDEIIYWVDSYDRNIRRSFM-LEAQKGQVQAVIS--DERRIEALDIDPVDEIIYWVDSYDRNI 393 (428)
Q Consensus 325 ~~~~l~~d~~~~~lyWtd~~~~~I~ra~l-~g~~~~~~~~i~~--~~~~p~glavD~~~~~lYwtd~~~~~I 393 (428)
.|.++++|+. +.||-++...++|.+-.. +| +...++. .+..|.++++|.. ++||.++....++
T Consensus 249 ~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G----~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 249 ICDGISIDKD-HNIYVGDLAHSAIGVITSADR----AYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHHS 314 (343)
T ss_dssp SCSCEEECTT-CCEEEEEGGGTEEEEEETTTT----EEEEEEECGGGSCEEEEEECTT-SCEEEEECCGGGS
T ss_pred CCceEEECCC-CCEEEEccCCCeEEEEECCCC----CEEEEEECCceecCCeeEECCC-CcEEEEeCccccc
Confidence 3558999985 789999999999999888 66 3455554 4889999999975 7899999866544
No 154
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.58 E-value=0.0053 Score=59.40 Aligned_cols=124 Identities=12% Similarity=0.084 Sum_probs=81.1
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEE------eCCCCCceeEEEcCC---CCCEEEEEECC-------CCeEEEEEcCCC
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLV------MTGVRHPTGLSVDAA---MDHTLYWVDSK-------LNTIESVRHDGR 64 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~------~~~~~~P~glavD~~---~~~~lYW~d~~-------~~~I~~~~ldG~ 64 (428)
||.++.. .+|.+.+.||...+++. .....-|.||++++. ++ +||.++.. ..+|.+..+++.
T Consensus 32 l~V~e~~--G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g-~lYv~~~~~~~~g~~~~~v~r~~~~~~ 108 (353)
T 2g8s_A 32 MLITLRG--GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR-RIWLSYSEVGDDGKAGTAVGYGRLSDD 108 (353)
T ss_dssp EEEEETT--TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC-EEEEEEEEECSSSCEEEEEEEEEECTT
T ss_pred EEEEeCC--ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCC-EEEEEEeCCCCCCCceeEEEEEEECCC
Confidence 4666653 47888877775432221 123446799999986 77 89999765 458999988764
Q ss_pred -----CeEEEEeCC----CCccceeeeecc-ccEEEEEeCC-------------CCceeeeccCCC------------Cc
Q psy951 65 -----NRQTILSGS----DKLQHPISLDVF-ENNIYWLARD-------------TGSLYKQDKFGR------------GV 109 (428)
Q Consensus 65 -----~~~~i~~~~----~~~~~p~~l~~~-~~~lYwtD~~-------------~~~I~~~~~~g~------------~~ 109 (428)
..++++... .....+-+|.+. +++||++.-. .++|+|++.+|+ ..
T Consensus 109 ~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~ 188 (353)
T 2g8s_A 109 LSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVR 188 (353)
T ss_dssp SSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSC
T ss_pred CCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCC
Confidence 355666532 122345566654 6699999633 358999999875 13
Q ss_pred eeeeccCCCCCccccccc
Q psy951 110 PVLISKDLVNPSGVKAYH 127 (428)
Q Consensus 110 ~~~~~~~~~~p~~I~v~~ 127 (428)
.+++..++.+|.++++..
T Consensus 189 ~~i~a~G~rnp~gl~~d~ 206 (353)
T 2g8s_A 189 AEIWSYGIRNPQGMAMNP 206 (353)
T ss_dssp TTEEEECCSEEEEEEEET
T ss_pred ccEEEEcCcCccceEEEC
Confidence 456666777788887654
No 155
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.53 E-value=0.00034 Score=49.91 Aligned_cols=36 Identities=25% Similarity=0.648 Sum_probs=28.6
Q ss_pred CCCCCCCCCC--cccc-----CCCcceecCCCCCCCCCCCCCCcccccCc
Q psy951 137 NPCSQSPCSH--LCLV-----IPGGYQCACPENATPKLPGVAEIRCSAAV 179 (428)
Q Consensus 137 n~C~~~~C~~--~C~~-----~~~~~~C~C~~g~~~~~~~~~g~~C~~~~ 179 (428)
++|.+++|.| +|++ ..++|.|.|++|| .|..|+...
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf-------~G~~Ce~~i 49 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF-------TGARCTENV 49 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE-------ESTTSCEEC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCC-------cCCccCcCc
Confidence 5677778887 8986 5578999999999 678897443
No 156
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.51 E-value=0.001 Score=65.46 Aligned_cols=31 Identities=35% Similarity=0.919 Sum_probs=0.0
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYTGI 224 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~~ 224 (428)
+|.|||+|.... .|.|++||.|..|+...+.
T Consensus 372 ~C~ngg~C~~~~----~C~C~~G~~G~~Ce~c~C~ 402 (426)
T 3zyj_B 372 HCQNGGTCHNNV----RCLCPAAYTGILCEKLRCE 402 (426)
T ss_dssp -----------------------------------
T ss_pred cCCCCCCcCCCC----CCcCCCCCcCCCCcCCCCC
Confidence 578889997653 8999999999999876554
No 157
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.51 E-value=0.0012 Score=55.19 Aligned_cols=31 Identities=39% Similarity=0.866 Sum_probs=28.1
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
+|.|+|+|++.. +.|.|.|++||+|..|+..
T Consensus 54 pC~n~g~C~~~~-g~y~C~C~~G~~G~~C~~~ 84 (142)
T 2c4f_L 54 PCQNGGSCKDQL-QSYICFCLPAFEGRNCETH 84 (142)
T ss_dssp CCCTTCEEEEET-TEEEEECCTTEESTTSCEE
T ss_pred CcCCCCEEeCCC-CCEEeeCCCCccCCccccC
Confidence 789999999887 6799999999999999873
No 158
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.50 E-value=0.00042 Score=61.26 Aligned_cols=43 Identities=30% Similarity=0.714 Sum_probs=0.0
Q ss_pred cccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 173 IRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 173 ~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
..|.+.+++. . .+|.|||+|++.. |.|.|.|++||+|..|+..
T Consensus 37 ~~c~dideC~-~----~pC~ngg~C~n~~-g~y~C~C~~Gf~G~~Ce~~ 79 (195)
T 1nfu_B 37 NKYKDGDQCE-T----SPCQNQGKCKDGL-GEYTCTCLEGFEGKNCELF 79 (195)
T ss_dssp -------------------------------------------------
T ss_pred ccCCCCcccC-C----CCCCCCCEeECCC-CCeeEeCCCCceecccccc
Confidence 3466555432 2 2789999999887 5799999999999999874
No 159
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=96.50 E-value=0.00059 Score=50.40 Aligned_cols=30 Identities=23% Similarity=0.651 Sum_probs=24.3
Q ss_pred CCCCCCEEeeCC-CCceEecCCCCCccCccCC
Q psy951 190 QCQNGGMCAESE-TGDLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 190 ~C~ngg~C~~~~-~g~~~C~C~~gy~G~~Ce~ 220 (428)
.|.|| +|.... .+.+.|.|++||+|.+||.
T Consensus 47 yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 47 FCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp CCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 68897 995433 2568999999999999985
No 160
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.47 E-value=0.00074 Score=57.67 Aligned_cols=32 Identities=38% Similarity=0.857 Sum_probs=28.5
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.++|+|.+.. +.|.|.|++||.|..||...
T Consensus 126 ~C~~~g~C~~~~-~~~~c~C~~g~~G~~Ce~~~ 157 (162)
T 1g1s_A 126 SCSKQGECLETI-GNYTCSCYPGFYGPECEYVR 157 (162)
T ss_dssp GGGGSEEEEECS-SSEEEEECTTEESTTSCEEC
T ss_pred CCCCCCEEecCC-CCceEeCCCCCcCcccccCc
Confidence 688999999987 56999999999999999864
No 161
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.41 E-value=0.0011 Score=67.88 Aligned_cols=60 Identities=23% Similarity=0.488 Sum_probs=13.2
Q ss_pred cceecCCCCCCCCCCCCCCcccccCcc------CCCCCCCCCCCCCCCEEeeCC-CCceEecCCCCCccCccCC
Q psy951 154 GYQCACPENATPKLPGVAEIRCSAAVE------RPRPLPRVCQCQNGGMCAESE-TGDLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 154 ~~~C~C~~g~~~~~~~~~g~~C~~~~~------~~~~~~~~c~C~ngg~C~~~~-~g~~~C~C~~gy~G~~Ce~ 220 (428)
.+.|.|++|| .|..|+.-.. .....+.+|+|.++|.|...- ....+|.|++||+|..||.
T Consensus 459 tg~C~C~~g~-------~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 459 TGYCYCKRLV-------TGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp TCCBCBCTTC-------CSTTTCC--------------------------------------------------
T ss_pred CCEEECCCCC-------cCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 4689999999 5777752100 001123467899998775432 1235799999999999974
No 162
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=96.36 E-value=0.00069 Score=58.55 Aligned_cols=49 Identities=22% Similarity=0.663 Sum_probs=36.1
Q ss_pred cceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 154 GYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 154 ~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
.++|.|++|| .|..|+. +... + .|.|| +|+ +.++|.|++||+|..|+..
T Consensus 82 ~~~C~C~~G~-------~G~~C~~----C~~~--~-~C~~g-~C~----~~~~C~C~~G~~G~~C~~~ 130 (169)
T 2vj2_A 82 PGDCRCQYGW-------QGLYCDK----CIPH--P-GCVHG-ICN----EPWQCLCETNWGGQLCDKD 130 (169)
T ss_dssp TTCCEECTTE-------ESSSSCE----ECCC--T-TCSSE-ECS----STTCCEECTTEETTTTCEE
T ss_pred CCeeECCCCC-------CCCCccc----CCCC--C-CCCCC-CcC----CCCEEeCCCCCCCCcccCC
Confidence 5899999999 5677753 1111 1 37675 887 4589999999999999854
No 163
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.25 E-value=0.65 Score=42.13 Aligned_cols=74 Identities=9% Similarity=0.013 Sum_probs=54.6
Q ss_pred CCCCceeEEEcCCCCCEEEEEECCC--CeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEEEEEeCCCCceeeeccCC
Q psy951 29 GVRHPTGLSVDAAMDHTLYWVDSKL--NTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 29 ~~~~P~glavD~~~~~~lYW~d~~~--~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g 106 (428)
....-.||++|. + +||-+.... +.|.++++.......-+.-. ......++++.+++||-.+|..+.++..+...
T Consensus 19 ~~~ftqGL~~~~--~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 19 TTAFTEGLFYLR--G-HLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp TTCCEEEEEEET--T-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CccccccEEEEC--C-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCc
Confidence 344567999985 6 899997654 59999999765443322321 24455788999999999999999999999764
No 164
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.24 E-value=0.0021 Score=48.28 Aligned_cols=29 Identities=28% Similarity=0.928 Sum_probs=24.2
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCc--cCccCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFA--GTFCEN 220 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~--G~~Ce~ 220 (428)
+|.| |+|++.. |.|+|.|++||. |..|+.
T Consensus 13 ~C~~-g~C~n~~-g~y~C~C~~Gy~~~g~~C~d 43 (82)
T 1emn_A 13 VCKH-GQCINTD-GSYRCECPFGYILAGNECVD 43 (82)
T ss_dssp SCSS-SEECCCS-SCCCEECCTTEEEETTEEEE
T ss_pred CcCC-CEEEecC-CCEEEECCCCeECCCCccCC
Confidence 5666 7999887 679999999997 888863
No 165
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.16 E-value=0.0019 Score=52.55 Aligned_cols=60 Identities=18% Similarity=0.459 Sum_probs=42.4
Q ss_pred CCCC--ccccCC--Ccc-eecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCc
Q psy951 143 PCSH--LCLVIP--GGY-QCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTF 217 (428)
Q Consensus 143 ~C~~--~C~~~~--~~~-~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~ 217 (428)
+|+| +|.+.. .++ .|.|++|| .|..|+..... .|.++ .+..|.|.|..+++|..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~-------~G~~Ce~~~~~--------~C~~g------~G~~YrG~~~~t~sG~~ 60 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKF-------GGQHCEIDKSK--------TCYEG------NGHFYRGKASTDTMGRP 60 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTE-------ESTTSCEESSC--------CSBCS------SCTTCCSCCCBBTTSCB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCC-------CCccccccCcC--------CCccc------ccccceeeccccccCCc
Confidence 4665 777763 556 99999999 67899764320 23332 23469999999999999
Q ss_pred cCCCCC
Q psy951 218 CENYTG 223 (428)
Q Consensus 218 Ce~~~~ 223 (428)
|+.=.+
T Consensus 61 Cq~W~s 66 (122)
T 2fd6_A 61 CLPWNS 66 (122)
T ss_dssp BCCTTS
T ss_pred ccCccC
Confidence 987433
No 166
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.15 E-value=1 Score=43.36 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=55.8
Q ss_pred cccceeEEeeccCCCEEEEEecCCC--------------eEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEe
Q psy951 322 DERRIEALDIDPVDEIIYWVDSYDR--------------NIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVD 387 (428)
Q Consensus 322 ~~~~~~~l~~d~~~~~lyWtd~~~~--------------~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd 387 (428)
....+.+++++|..++||-+..... +|+.-.+.. .+....+..-..|.+++++..++.||.+.
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT---DTVKEFWEAGNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT---TEEEEEEECSSSEEEEEECTTSCEEEEEE
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC---CcEEEEecCCCCCceEEEcCCCCEEEEEE
Confidence 3456789999999999998876543 666666543 32333344456799999999999999998
Q ss_pred CCCCcEEEEEccC
Q psy951 388 SYDRNIRRSFMLE 400 (428)
Q Consensus 388 ~~~~~I~~~~~~g 400 (428)
.....|.+-++++
T Consensus 420 ~~d~~i~v~~~~~ 432 (433)
T 3bws_A 420 FLDHQIRVYRRDG 432 (433)
T ss_dssp TTTTEEEEEEETT
T ss_pred CCCCeEEEEEecC
Confidence 8777888887764
No 167
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.13 E-value=0.031 Score=53.85 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=78.5
Q ss_pred CCeEEEEEcCCC--------CcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEc--CCCCe------------
Q psy951 9 SPRIESAWMDGS--------HRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRH--DGRNR------------ 66 (428)
Q Consensus 9 ~~~I~~a~~DG~--------~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~l--dG~~~------------ 66 (428)
..+|.|.+.||+ .. .++..++..|.||++|+ .+ .||.+|.+.+.-+.+++ .|.+.
T Consensus 173 ~G~IlRi~~dG~ip~~nPf~~~-~i~a~G~RNp~Gla~dp-~G-~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~ 249 (347)
T 3das_A 173 GGKILRMTPDGEPAPGNPFPGS-PVYSYGHRNVQGLAWDD-KQ-RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGS 249 (347)
T ss_dssp TTCEEEECTTSSBCTTCSSTTC-CEEEBCCSBCCEEEECT-TC-CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCT
T ss_pred CCEEEEEeCCCCccCCCCCCCC-eEEeeCCCCcceEEECC-CC-CEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCc
Confidence 368999999998 44 35667999999999998 57 79999988754333333 44432
Q ss_pred ----EEEEeCCCCccceeeeeccccEEEEEeCCCCceeeeccCCCCc---eeeecc-CCCCCcccccccc
Q psy951 67 ----QTILSGSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFGRGV---PVLISK-DLVNPSGVKAYHA 128 (428)
Q Consensus 67 ----~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g~~~---~~~~~~-~~~~p~~I~v~~~ 128 (428)
.++.-.. ....|.+++++++.+|-......+|++...++... .+.+.. ....|.+|++..+
T Consensus 250 ~~~~P~~~~~~-~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD 318 (347)
T 3das_A 250 GFHDPVAQWST-DEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG 318 (347)
T ss_dssp TCCCCSEEECT-TTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET
T ss_pred cccCCcEecCC-CCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC
Confidence 0111110 12468899999999999999999999998875431 222333 3456667765443
No 168
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.12 E-value=0.00091 Score=55.44 Aligned_cols=31 Identities=42% Similarity=1.032 Sum_probs=0.0
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
+|.|+|+|++.. +.|.|.|++||+|..|+..
T Consensus 49 pC~n~g~C~~~~-~~y~C~C~~G~~G~~C~~~ 79 (134)
T 2vh0_B 49 PCQNQGKCKDGL-GEYTCTCLEGFEGKNCELF 79 (134)
T ss_dssp --------------------------------
T ss_pred CCCCcCCcccCC-CCEEeeCCCCccCCccccC
Confidence 689999999886 5799999999999999874
No 169
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.90 E-value=0.0031 Score=60.07 Aligned_cols=31 Identities=32% Similarity=0.772 Sum_probs=27.5
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
+|.|+|+|.+.. +.|.|.|++||.|..|+..
T Consensus 12 pC~~~g~C~~~~-~~~~C~C~~g~~g~~C~~~ 42 (317)
T 3h5c_B 12 PCLHNGSCQDSI-WGYTCTCSPGYEGSNCELA 42 (317)
T ss_dssp CCTTTCCCCCCS-SSCCCCCSSSCCSSSSCCC
T ss_pred CCCCCCEeECCC-CCeEEECCCCCcCCccccC
Confidence 689999999877 5799999999999999843
No 170
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.86 E-value=0.004 Score=58.32 Aligned_cols=41 Identities=24% Similarity=0.587 Sum_probs=33.3
Q ss_pred CCCCCC---CCCCCccccCCCcceecCCCCCCCCCCCCCCcccccCc
Q psy951 136 PNPCSQ---SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCSAAV 179 (428)
Q Consensus 136 ~n~C~~---~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~ 179 (428)
.|+|.. ++|+|.|.+..++|+|.|++|| .+..+ +.+|.+..
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~-~l~~d--~~sC~p~~ 45 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGY-RLGED--HKQCVPHD 45 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTE-EECTT--SSCEEECS
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCc-ccCCC--CCcccccc
Confidence 488974 4899999999999999999999 67654 57888754
No 171
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=95.81 E-value=0.0046 Score=64.83 Aligned_cols=52 Identities=23% Similarity=0.643 Sum_probs=38.4
Q ss_pred eecCCCCCCCCCCCCCCcccccC--ccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCC
Q psy951 156 QCACPENATPKLPGVAEIRCSAA--VERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 156 ~C~C~~g~~~~~~~~~g~~C~~~--~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~ 220 (428)
+|.|++|| .|..|+-. ...|.. ...++|.++|+|.. ..|.|++||+|..|+.
T Consensus 539 ~C~C~~G~-------~G~~Cec~~~~~~C~~-~~g~~Cs~~G~C~~-----g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 539 KCRCHPGF-------EGSACQCERTTEGCLN-PRRVECSGRGRCRC-----NVCECHSGYQLPLCQE 592 (687)
T ss_dssp EEEECTTC-------CSTTSCSCCSSCTTBC-TTCSBTSSSCCBCS-----SCBCCSTTCCTTTTCC
T ss_pred EEEcCCCC-------cCCCCccCCCCCCCCC-CCCCCCCCCCcCCC-----CEEECCCCCcCCCCCC
Confidence 79999999 67888722 122221 12347889999975 3599999999999997
No 172
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=95.80 E-value=0.0033 Score=48.26 Aligned_cols=36 Identities=28% Similarity=0.694 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCC--ccccCC--CcceecCCCCCCCCCCCCCCccccc
Q psy951 135 APNPCSQSPCSH--LCLVIP--GGYQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~--~~~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
.+++|..++|.+ +|++.. ++|+|.|++|| .|..|+.
T Consensus 47 ~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~-------~G~~Ce~ 86 (91)
T 1tpg_A 47 PVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGF-------AGKSCEI 86 (91)
T ss_dssp CEEECSSCCSCTTCEEEEESSSSCEEEECCTTC-------BSSSCCB
T ss_pred cCCcccCCCCCCCCEeecCCCCCCeEeECCCCC-------cCCcCCc
Confidence 457888889987 899887 89999999999 6788874
No 173
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=95.68 E-value=0.0031 Score=56.66 Aligned_cols=68 Identities=24% Similarity=0.481 Sum_probs=42.5
Q ss_pred CCCCC--ccccCCCcceecCCCCCCCCCC-CCCCcccccCccCCCCCCCCCCCCCC--CEEeeCCCCceEecCCCCCccC
Q psy951 142 SPCSH--LCLVIPGGYQCACPENATPKLP-GVAEIRCSAAVERPRPLPRVCQCQNG--GMCAESETGDLTCNCRQDFAGT 216 (428)
Q Consensus 142 ~~C~~--~C~~~~~~~~C~C~~g~~~~~~-~~~g~~C~~~~~~~~~~~~~c~C~ng--g~C~~~~~g~~~C~C~~gy~G~ 216 (428)
.+|++ .|+. ..|.|++|| .... . .|..|+.....|... ...+|.++ |+|.. | +|.|.+||+|.
T Consensus 143 ~~Csg~G~C~~----g~C~C~~gw-~~~~~~-~G~~Ce~~~~~C~~~-~g~~C~~~~~G~C~~---g--~C~C~~G~~G~ 210 (217)
T 2p28_B 143 IICSGLGDCVC----GQCLCHTSD-VPGKLI-YGQYCECDTINCERY-NGQVCGGPGRGLCFC---G--KCRCHPGFEGS 210 (217)
T ss_dssp CBGGGTEEEET----TEEEECCCC-STTCCE-ESTTSCEESSCSCEE-TTEETTCTTTEEEET---T--EEEECTTEEST
T ss_pred CCCCCCCEEeC----CceECCCCC-CCcccE-ECCCcccCCccCCCC-CCCCCCCCCCcEEeC---C--eeECCCCCccC
Confidence 35654 5653 479999994 1000 0 578887433222211 11147777 99984 2 79999999999
Q ss_pred ccCCC
Q psy951 217 FCENY 221 (428)
Q Consensus 217 ~Ce~~ 221 (428)
.|+..
T Consensus 211 ~C~~~ 215 (217)
T 2p28_B 211 ACQHH 215 (217)
T ss_dssp TSCEE
T ss_pred CcCCC
Confidence 99864
No 174
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.66 E-value=0.0037 Score=53.83 Aligned_cols=40 Identities=28% Similarity=0.673 Sum_probs=31.4
Q ss_pred CCCCCCCCC-----CCCccccCCCcceecCCCCCCCCCCCCCCccccc
Q psy951 135 APNPCSQSP-----CSHLCLVIPGGYQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 135 ~~n~C~~~~-----C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
..++|...+ |++.|.+.+++|.|.|++|| .+..+ +.+|.+
T Consensus 123 di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy-~l~~d--~~~C~~ 167 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGY-VLHRN--KRTCSE 167 (170)
T ss_dssp ECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTE-EECTT--SSCEEE
T ss_pred ccCcccCCCCCCCccCCccccCCCCEEEeCCCCc-EECCC--CCcccc
Confidence 468898643 99999999999999999999 55443 466754
No 175
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=95.60 E-value=0.0043 Score=65.03 Aligned_cols=54 Identities=24% Similarity=0.524 Sum_probs=38.2
Q ss_pred ceecCCCCCCCCCCCCCCcccccCcc---------CCCCCCCCCCCCCCCEEeeCCCCceEecCC------CCCccCccC
Q psy951 155 YQCACPENATPKLPGVAEIRCSAAVE---------RPRPLPRVCQCQNGGMCAESETGDLTCNCR------QDFAGTFCE 219 (428)
Q Consensus 155 ~~C~C~~g~~~~~~~~~g~~C~~~~~---------~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~------~gy~G~~Ce 219 (428)
..|.|++|| .|..|+-... .|......-.|.++|+|.. | .|.|+ +||.|..||
T Consensus 446 g~C~C~~Gy-------~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~---G--~C~C~~~~~~~~G~~G~~Ce 513 (687)
T 3k6s_B 446 GICRCDTGY-------IGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---G--QCLCHTSDVPGKLIYGQYCE 513 (687)
T ss_dssp SSEEECSSE-------ESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET---T--EEEECCCCSTTCCEESTTSC
T ss_pred CEeEcCCCC-------cCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC---C--EEEcCCCCCCCCCccccccc
Confidence 589999999 6788873221 1221111224999999983 3 79999 999999998
Q ss_pred C
Q psy951 220 N 220 (428)
Q Consensus 220 ~ 220 (428)
.
T Consensus 514 ~ 514 (687)
T 3k6s_B 514 C 514 (687)
T ss_dssp E
T ss_pred c
Confidence 4
No 176
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.52 E-value=0.03 Score=54.13 Aligned_cols=93 Identities=10% Similarity=-0.003 Sum_probs=65.6
Q ss_pred cccceeEEeeccCCCEEEEEec-----------------CCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEE
Q psy951 322 DERRIEALDIDPVDEIIYWVDS-----------------YDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIY 384 (428)
Q Consensus 322 ~~~~~~~l~~d~~~~~lyWtd~-----------------~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lY 384 (428)
-+..|-++++|+. +.+|-++. ...+++|..- .+.+++.+++..|+|||++..++.||
T Consensus 163 ~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----~~~~~~~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 163 LLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVAEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp TCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----TCCEEEEEEESSEEEEEECTTSSEEE
T ss_pred CCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEEEEEC-----CeEEEeecCCcccCcceECCCCCEEE
Confidence 4567888999985 55444432 1237887643 24566778999999999999999999
Q ss_pred EEeCCCCcEEEEEccC--cce-eEEEecccCCCCCCCccccccc
Q psy951 385 WVDSYDRNIRRSFMLE--AQK-GQVQAGASRHQNGVPASSQRNL 425 (428)
Q Consensus 385 wtd~~~~~I~~~~~~g--~~~-~~l~~~~~~~~~~~p~~~~~~~ 425 (428)
++|+...+|.+-++++ +.. +.++ .. ...|-+|++|-
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~----~~-~g~PDGi~vD~ 275 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVL----SF-DTLVDNISVDP 275 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEE----EC-SSEEEEEEECT
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEE----eC-CCCCceEEEeC
Confidence 9999999999999874 321 1122 11 36788888775
No 177
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.51 E-value=0.07 Score=53.40 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=67.9
Q ss_pred ccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEE--e-------ccccceeeeeecc---CCeEEEE
Q psy951 319 VISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVI--S-------DERRIEALDIDPV---DEIIYWV 386 (428)
Q Consensus 319 ~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~--~-------~~~~p~glavD~~---~~~lYwt 386 (428)
+.+++.+|.+|+++|. +.||-++....+|+|...+. +..+.+. . +..-+.|||+|.. ++.||++
T Consensus 22 ~a~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 22 ILSNLNKPHALLWGPD-NQIWLTERATGKILRVNPES---GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EECCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCC---CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 4478999999999996 56999998877899887642 2233332 2 1334559999987 8999999
Q ss_pred eCC------------CCcEEEEEccCc-----ceeEEEecccCCCCCCCcccccc
Q psy951 387 DSY------------DRNIRRSFMLEA-----QKGQVQAGASRHQNGVPASSQRN 424 (428)
Q Consensus 387 d~~------------~~~I~~~~~~g~-----~~~~l~~~~~~~~~~~p~~~~~~ 424 (428)
++. ...|.+..+++. ..++|+...-......+.+|+++
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~ 152 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIG 152 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeEC
Confidence 864 347888888753 34556543222233445666553
No 178
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=95.40 E-value=0.0046 Score=55.54 Aligned_cols=55 Identities=22% Similarity=0.449 Sum_probs=38.5
Q ss_pred ceecCCCCCCCCCCCCCCcccccCcc---------CCCCCCCCCCCCCCCEEeeCCCCceEecCCCC------CccCccC
Q psy951 155 YQCACPENATPKLPGVAEIRCSAAVE---------RPRPLPRVCQCQNGGMCAESETGDLTCNCRQD------FAGTFCE 219 (428)
Q Consensus 155 ~~C~C~~g~~~~~~~~~g~~C~~~~~---------~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g------y~G~~Ce 219 (428)
..|.|++|| .|..|+-... .|.......+|.++|+|.. .+|.|++| |+|..||
T Consensus 107 g~C~C~~G~-------~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-----g~C~C~~gw~~~~~~~G~~Ce 174 (217)
T 2p28_B 107 GICRCDTGY-------IGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-----GQCLCHTSDVPGKLIYGQYCE 174 (217)
T ss_dssp TEEEECTTE-------ESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-----TEEEECCCCSTTCCEESTTSC
T ss_pred CEEECCCCc-------cCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-----CceECCCCCCCcccEECCCcc
Confidence 589999999 6777863321 1221112346889999983 26999999 7999998
Q ss_pred CC
Q psy951 220 NY 221 (428)
Q Consensus 220 ~~ 221 (428)
..
T Consensus 175 ~~ 176 (217)
T 2p28_B 175 CD 176 (217)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 179
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=95.35 E-value=0.012 Score=58.20 Aligned_cols=32 Identities=28% Similarity=0.897 Sum_probs=28.2
Q ss_pred CCCCCCEEeeCCCCceEecCCC-CCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQ-DFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~-gy~G~~Ce~~~ 222 (428)
+|.|||+|.... +.|.|.|+. ||.|..|+...
T Consensus 192 pC~n~g~C~~~~-~~~~C~C~~~~~~G~~C~~~~ 224 (410)
T 3asi_A 192 SCSNQGVCLQQW-DGFSCDCSMTSFSGPLCNDPG 224 (410)
T ss_dssp SSSTTCEEEECS-SSEEEECTTTSEESTTSCEEC
T ss_pred cCCCCCEecCCC-CCceEeccCCcccCCCCCCCc
Confidence 799999999876 569999996 99999999754
No 180
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.32 E-value=0.0051 Score=46.66 Aligned_cols=29 Identities=38% Similarity=1.021 Sum_probs=25.5
Q ss_pred CCCCCCCCCCCCccccCCCcceecCC--CCC
Q psy951 135 APNPCSQSPCSHLCLVIPGGYQCACP--ENA 163 (428)
Q Consensus 135 ~~n~C~~~~C~~~C~~~~~~~~C~C~--~g~ 163 (428)
.+++|..++|++.|++.+++|+|.|+ .||
T Consensus 44 dideC~~~~C~~~C~n~~g~y~C~C~g~~G~ 74 (87)
T 1z6c_A 44 DIDECSENMCAQLCVNYPGGYTCYCDGKKGF 74 (87)
T ss_dssp CCCHHHHSCCSSEECCCSSSCCEECCSSSCC
T ss_pred CcCeeCCCCCCCEEEccCCCEEEECCCCcCC
Confidence 67889888999999999999999996 555
No 181
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.31 E-value=0.016 Score=44.82 Aligned_cols=78 Identities=17% Similarity=0.435 Sum_probs=51.2
Q ss_pred CCCCCCCCCC--cccc-CCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCC
Q psy951 137 NPCSQSPCSH--LCLV-IPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDF 213 (428)
Q Consensus 137 n~C~~~~C~~--~C~~-~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy 213 (428)
+.|....|+. .|.. .++..+|.|..|| .. .|..|......|..... -|.-...|.........|.|.++|
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY-~~----dg~~Cv~~Np~C~~nNG--GCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGF-KE----VGGKCVPASITCEENNG--GCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTE-EE----CSSSEEECCCCTTSGGG--GSCTTSEEEECTTSCEEEECCSTT
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCe-ec----cCCEEEECCcchhhcCC--CcCCCcEeEECCCCEEEeECCCCC
Confidence 4566556654 7777 5688899999999 22 35678776321221100 144445898886568999999985
Q ss_pred c-----cCccCCC
Q psy951 214 A-----GTFCENY 221 (428)
Q Consensus 214 ~-----G~~Ce~~ 221 (428)
+ |.+|...
T Consensus 84 ~~~~~~GvfC~~s 96 (105)
T 1n1i_A 84 SEPLFEGVFCSSS 96 (105)
T ss_dssp CCEEGGGTEECCC
T ss_pred CccccceEEECCC
Confidence 5 7788654
No 182
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.18 E-value=0.0036 Score=49.60 Aligned_cols=29 Identities=38% Similarity=1.043 Sum_probs=0.6
Q ss_pred CCCCCCC-CCCCCccccCCCcceecCCCCC
Q psy951 135 APNPCSQ-SPCSHLCLVIPGGYQCACPENA 163 (428)
Q Consensus 135 ~~n~C~~-~~C~~~C~~~~~~~~C~C~~g~ 163 (428)
.+|+|.. ++|++.|++.+++|.|.|++||
T Consensus 68 dideC~~~~~C~~~C~n~~gsy~C~C~~Gy 97 (107)
T 2w2n_E 68 DIDECQDPDTCSQLCVNLEGGYKCQCEEGF 97 (107)
T ss_dssp C-----------------------------
T ss_pred cccccCCCCCcCCeeecCCCCEEEECCCCc
Confidence 6789985 6899999999999999999999
No 183
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.16 E-value=0.26 Score=46.86 Aligned_cols=106 Identities=14% Similarity=0.145 Sum_probs=69.0
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEeCCCC-------CceeEEE---cCCCCCEEEE-EEC------------CCCeEE
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVMTGVR-------HPTGLSV---DAAMDHTLYW-VDS------------KLNTIE 57 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~~~~~-------~P~glav---D~~~~~~lYW-~d~------------~~~~I~ 57 (428)
+|.+++... +|.+.+.+|.....+...++. .|.||.+ |+. + +|+- ++. +...+.
T Consensus 27 ~~vs~l~~g-~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-g-rL~vv~~~~~af~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 27 FYQSNLYKG-RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-K-RLFAVMKNAKSFNFADQSSHGASSFH 103 (334)
T ss_dssp EEEEETTTT-EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-C-EEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred EEEEeccCC-EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-C-cEEEEEcccccccccccccCCCCEEE
Confidence 355565554 899999986554444333332 5789999 676 6 8877 452 356799
Q ss_pred EEEcC----CCCeEEEE-eCC--C-------Cccceeeeecc-ccEEEEEeCCC-CceeeeccCCCCc
Q psy951 58 SVRHD----GRNRQTIL-SGS--D-------KLQHPISLDVF-ENNIYWLARDT-GSLYKQDKFGRGV 109 (428)
Q Consensus 58 ~~~ld----G~~~~~i~-~~~--~-------~~~~p~~l~~~-~~~lYwtD~~~-~~I~~~~~~g~~~ 109 (428)
+.+++ |+....+- +.. + ....+-.+++. ++++|.+|... +.|++++.+|...
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 99999 43322221 110 0 11235566665 68999999888 9999999998743
No 184
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.12 E-value=0.0042 Score=47.01 Aligned_cols=33 Identities=30% Similarity=0.881 Sum_probs=26.2
Q ss_pred CCCCCCCCC--CCC-ccccCCCcceecCCCCCCCCCC
Q psy951 135 APNPCSQSP--CSH-LCLVIPGGYQCACPENATPKLP 168 (428)
Q Consensus 135 ~~n~C~~~~--C~~-~C~~~~~~~~C~C~~g~~~~~~ 168 (428)
.+++|..++ |.+ .|++.+++|+|.|++|| .+.+
T Consensus 45 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~-~~~~ 80 (86)
T 1lmj_A 45 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGH-QLSP 80 (86)
T ss_dssp ECCHHHHCSSTTTTSEEEEETTEEEEESCTTS-CCCS
T ss_pred CcccccCCCCcCCCCEeEcCCCCEEEECcCCc-ccCC
Confidence 467887654 764 99999999999999999 4443
No 185
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.10 E-value=0.0054 Score=52.19 Aligned_cols=38 Identities=26% Similarity=0.634 Sum_probs=32.4
Q ss_pred CCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCcc
Q psy951 136 PNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 136 ~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
.++|...+|++ .|.+..++|+|.|++|| .|..|+..++
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~-------~G~~Ce~~~~ 158 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGF-------YGPECEYVRD 158 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTE-------ESTTSCEECC
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCC-------cCcccccCcc
Confidence 35788888987 89999999999999999 6788987764
No 186
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=95.01 E-value=0.0057 Score=51.65 Aligned_cols=31 Identities=35% Similarity=0.894 Sum_probs=27.7
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
+|.++|.|.+.. +.|.|.|.+||+|..||..
T Consensus 126 pc~~~g~C~~~~-~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 126 SCSGHGECVETI-NNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp GGGGSEEEEEET-TEEEEEECTTEESTTSCEE
T ss_pred CCCCCCEeecCC-CCeeEECCCCccCcccccc
Confidence 688999999877 6799999999999999974
No 187
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=94.96 E-value=0.015 Score=49.75 Aligned_cols=32 Identities=34% Similarity=0.843 Sum_probs=28.1
Q ss_pred CCCCCCCEEeeCCC-CceEe-cCCCCCccCccCC
Q psy951 189 CQCQNGGMCAESET-GDLTC-NCRQDFAGTFCEN 220 (428)
Q Consensus 189 c~C~ngg~C~~~~~-g~~~C-~C~~gy~G~~Ce~ 220 (428)
|+|.|+++|..... +.++| .|+++|+|.+||.
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCE
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC
Confidence 68999999988763 67999 7999999999996
No 188
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.92 E-value=0.31 Score=44.99 Aligned_cols=107 Identities=7% Similarity=-0.058 Sum_probs=71.4
Q ss_pred CEEEeeCCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCe-EEEEeCC--CCc
Q psy951 1 MFWAETGASPRIESAWMD-GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNR-QTILSGS--DKL 76 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~D-G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~-~~i~~~~--~~~ 76 (428)
||+++|... ++...+.+ ++....+ .-+ .|.|..+.+..+ +||-++ +.++|..++...... +.+.-+. ...
T Consensus 78 lyv~t~~~~-~v~viD~~t~~v~~~i-~~g--~~~g~glt~Dg~-~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 78 LYQVVWLKN-IGFIYDRRTLSNIKNF-THQ--MKDGWGLATDGK-ILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp EEEEETTCS-EEEEEETTTTEEEEEE-ECC--SSSCCEEEECSS-SEEEEC-SSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred EEEEEecCC-EEEEEECCCCcEEEEE-ECC--CCCeEEEEECCC-EEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 588888665 78887776 3333333 222 466666666567 899998 689999999877543 2332221 123
Q ss_pred cceeeeeccccEEEEEeCCCCceeeeccCCCCceeee
Q psy951 77 QHPISLDVFENNIYWLARDTGSLYKQDKFGRGVPVLI 113 (428)
Q Consensus 77 ~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g~~~~~~~ 113 (428)
..|..+.+.+++||-..|..+.|.+++...+.....+
T Consensus 152 ~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 152 IRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp CCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred ccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 3466777778899999999999999998755444333
No 189
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=94.89 E-value=0.0069 Score=41.34 Aligned_cols=31 Identities=26% Similarity=0.622 Sum_probs=24.1
Q ss_pred CCCCCC--ccc--cCCCcceecCCCCCCCCCCCCCCcccccC
Q psy951 141 QSPCSH--LCL--VIPGGYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 141 ~~~C~~--~C~--~~~~~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
+++|.| +|. +..++|.|.|++|| .|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~Gy-------tG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGY-------IGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTE-------ESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCC-------cCCCCCcC
Confidence 346776 787 55678999999999 67888753
No 190
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.73 E-value=0.015 Score=49.56 Aligned_cols=32 Identities=31% Similarity=0.754 Sum_probs=27.8
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.++|+|.... +.|.|.|++||.|..||...
T Consensus 126 ~C~~~g~C~~~~-~~~~c~C~~g~~g~~C~~~~ 157 (164)
T 3cfw_A 126 SCSGHGECVEII-NNYTCNCDVGYYGPQCQFVQ 157 (164)
T ss_dssp SSCSSEEEEEET-TEEEEEECTTCBSSSSCBC-
T ss_pred cCCCCCeecccC-CCceeeeCCCcccccccccc
Confidence 688999999886 57999999999999998754
No 191
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.67 E-value=2.9 Score=39.15 Aligned_cols=77 Identities=10% Similarity=0.030 Sum_probs=56.6
Q ss_pred ccceeEEeeccCCCEEEEEecC-CCeEEEeeeccccCCceEEEE--eccccceeeeeeccCCeEEEEeCCCCcEEEEEcc
Q psy951 323 ERRIEALDIDPVDEIIYWVDSY-DRNIRRSFMLEAQKGQVQAVI--SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFML 399 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~-~~~I~ra~l~g~~~~~~~~i~--~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~ 399 (428)
...+.+++++|..++||-++.. ..+|.--.++.. ++..+.+. ..-..|.+++++..++.||.++...+.|.+-.+|
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-NGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-TCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 3457899999999999999988 676666566521 12233332 2235799999999999999999888889986666
Q ss_pred C
Q psy951 400 E 400 (428)
Q Consensus 400 g 400 (428)
.
T Consensus 337 ~ 337 (361)
T 3scy_A 337 Q 337 (361)
T ss_dssp T
T ss_pred C
Confidence 3
No 192
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.50 E-value=0.016 Score=49.08 Aligned_cols=39 Identities=36% Similarity=0.814 Sum_probs=30.4
Q ss_pred CCCCCCC---CCCCCccccCCCcceecCCCCCCCCCCCCCCcccc
Q psy951 135 APNPCSQ---SPCSHLCLVIPGGYQCACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 135 ~~n~C~~---~~C~~~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~ 176 (428)
..++|.. .+|++.|.+.++++.|.|++|| .+..+ +++|.
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy-~l~~~--~~~C~ 157 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEY-FLHDD--MKNCG 157 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTC-EECTT--SSCEE
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCc-EECCC--CCccc
Confidence 4578875 3799999999999999999999 55443 45665
No 193
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=94.47 E-value=0.011 Score=50.61 Aligned_cols=64 Identities=31% Similarity=0.762 Sum_probs=42.1
Q ss_pred ccccCC--Cccee-cCCCCCCCCCCCCCCcccccCcc-----CCC-----CCCCCCCCCCC------CEEeeCCCCceEe
Q psy951 147 LCLVIP--GGYQC-ACPENATPKLPGVAEIRCSAAVE-----RPR-----PLPRVCQCQNG------GMCAESETGDLTC 207 (428)
Q Consensus 147 ~C~~~~--~~~~C-~C~~g~~~~~~~~~g~~C~~~~~-----~~~-----~~~~~c~C~ng------g~C~~~~~g~~~C 207 (428)
.|...+ +.++| .|++|| .|..|+.=.. ... ....+|.|.++ +.|.... .+|
T Consensus 8 ~C~~~~~~g~~~C~~C~~g~-------~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~t---G~C 77 (162)
T 1klo_A 8 SCAIVPKTKEVVCTHCPTGT-------AGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLT---GEC 77 (162)
T ss_dssp CEEECSSSCCEEECSCCTTE-------ESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTT---CCB
T ss_pred cccccCCCCCEEeCCCCCCC-------cCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCC---Ccc
Confidence 676655 56899 799999 5677763110 000 01246788776 4675433 479
Q ss_pred -cCCCCCccCccCC
Q psy951 208 -NCRQDFAGTFCEN 220 (428)
Q Consensus 208 -~C~~gy~G~~Ce~ 220 (428)
.|.++|+|.+||.
T Consensus 78 ~~C~~g~~G~~Ce~ 91 (162)
T 1klo_A 78 LKCIYNTAGFYCDR 91 (162)
T ss_dssp CCBCTTEETTTTCE
T ss_pred cCCCCCCcCCCcCc
Confidence 5999999999986
No 194
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.40 E-value=0.0092 Score=61.19 Aligned_cols=36 Identities=33% Similarity=0.844 Sum_probs=31.6
Q ss_pred CCCCCCCCCCC--cccc-CCCcceecCC-CCCCCCCCCCCCcccccC
Q psy951 136 PNPCSQSPCSH--LCLV-IPGGYQCACP-ENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 136 ~n~C~~~~C~~--~C~~-~~~~~~C~C~-~g~~~~~~~~~g~~C~~~ 178 (428)
.++|.++||+| .|.+ ..++|+|.|+ .|| .|..|+..
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~-------~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGY-------SGPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSE-------ETTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCc-------CCCCCCCC
Confidence 37899999999 9999 7899999999 999 67889753
No 195
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=94.31 E-value=0.019 Score=41.67 Aligned_cols=29 Identities=28% Similarity=0.618 Sum_probs=23.1
Q ss_pred CCCCCCC--CCCCC--ccccCCCcceec-CCCCC
Q psy951 135 APNPCSQ--SPCSH--LCLVIPGGYQCA-CPENA 163 (428)
Q Consensus 135 ~~n~C~~--~~C~~--~C~~~~~~~~C~-C~~g~ 163 (428)
.+|+|.. ++|.+ .|++++++|+|. |..||
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~ 35 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAV 35 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcc
Confidence 4688875 47975 899999999998 55677
No 196
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.24 E-value=0.85 Score=41.86 Aligned_cols=101 Identities=11% Similarity=0.081 Sum_probs=66.8
Q ss_pred cceeeeecCccceeecccccc---ceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe--c----cccceee
Q psy951 304 PEIRAYETHKRRFRDVISDER---RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS--D----ERRIEAL 374 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~~~~---~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~--~----~~~p~gl 374 (428)
..+..++....+....+.... .|.+++++|..+++|.++....+|....+.. .+....+. . -..|.++
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT---GETLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT---CCEEEEEECCBTTEEEECTTCE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC---CCeEeeEEcCCcccccccccce
Confidence 344444544444333333223 5899999999999999998888888877754 22222222 1 1278999
Q ss_pred eeeccCCeEEEEeC-----------CCCcEEEEEccCcceeEEE
Q psy951 375 DIDPVDEIIYWVDS-----------YDRNIRRSFMLEAQKGQVQ 407 (428)
Q Consensus 375 avD~~~~~lYwtd~-----------~~~~I~~~~~~g~~~~~l~ 407 (428)
+++..++.||.++. ....|.+.++++......+
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 99999999999963 2467999888765544443
No 197
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.22 E-value=4 Score=39.00 Aligned_cols=81 Identities=12% Similarity=0.029 Sum_probs=60.5
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCC------------
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDR------------ 391 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~------------ 391 (428)
..+.+++++|..+++|.+.....+|..-.++. .+....+.....|.+++++..++.||.+.....
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence 36778999999999999998888888877764 323333445567899999999999999987643
Q ss_pred --cEEEEEccCcceeEEE
Q psy951 392 --NIRRSFMLEAQKGQVQ 407 (428)
Q Consensus 392 --~I~~~~~~g~~~~~l~ 407 (428)
.|.+.++........+
T Consensus 380 dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp CCEEEEEETTTTEEEEEE
T ss_pred ceEEEEEECCCCcEEEEe
Confidence 7888887655444444
No 198
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.93 E-value=0.017 Score=59.41 Aligned_cols=36 Identities=28% Similarity=0.821 Sum_probs=30.8
Q ss_pred CCCCCCCCCCC--ccccC-CCcceecCC-CCCCCCCCCCCCcccccC
Q psy951 136 PNPCSQSPCSH--LCLVI-PGGYQCACP-ENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 136 ~n~C~~~~C~~--~C~~~-~~~~~C~C~-~g~~~~~~~~~g~~C~~~ 178 (428)
+++|.++||+| .|.+. .++|.|.|+ +|| .|..|+..
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~-------~G~~Ce~~ 40 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGF-------YGENCTTP 40 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSE-------ETTTTCEE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCc-------cCCCCCCc
Confidence 47899999999 99964 489999999 999 68999864
No 199
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=93.92 E-value=0.0066 Score=56.33 Aligned_cols=41 Identities=29% Similarity=0.622 Sum_probs=31.1
Q ss_pred CCCCCC--CCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCcc
Q psy951 135 APNPCS--QSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 135 ~~n~C~--~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
.+|+|. .++|.. .|.+.+++|.|.|++|| . + .|..|.+.+.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy-~---G-nG~~C~d~d~ 48 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANY-T---G-NGRQCVAEGS 48 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTE-E---E-CSSSEEETTC
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCC-C---C-CCCcCCCCCC
Confidence 568897 458975 79999999999999999 2 3 4688988665
No 200
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.83 E-value=0.58 Score=42.82 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=56.8
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE-EeccccceeeeeeccCCeEEEEeCCCCcEEEEEccCcc
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV-ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQ 402 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i-~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~ 402 (428)
+++-||++||..+.||=..-...+|++..+.|. . ...+ +.+..-++|||++- .+.+|.++.+...+.+..++...
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~--v-~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGD--L-IRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCC--E-EEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCC--E-EEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCC
Confidence 689999999999999986656789999998872 2 2223 35778999999993 34555678788888888776554
No 201
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=93.74 E-value=0.022 Score=58.22 Aligned_cols=34 Identities=21% Similarity=0.597 Sum_probs=24.1
Q ss_pred CCCCCCCCCEEeeCC---CCceEecCCCCCccCccCC
Q psy951 187 RVCQCQNGGMCAESE---TGDLTCNCRQDFAGTFCEN 220 (428)
Q Consensus 187 ~~c~C~ngg~C~~~~---~g~~~C~C~~gy~G~~Ce~ 220 (428)
.+|+|.++|+|.+.. ...+.|.|++||.|..|+.
T Consensus 439 ~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 439 KSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp EECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred ccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 355777777665432 1235799999999999985
No 202
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=93.68 E-value=0.046 Score=61.74 Aligned_cols=33 Identities=27% Similarity=0.869 Sum_probs=28.8
Q ss_pred CCCCCCEEeeCCCCceEecCC-CCCccCccCCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCR-QDFAGTFCENYTG 223 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~-~gy~G~~Ce~~~~ 223 (428)
+|.|||+|.... ..|.|.|+ +||+|..|+....
T Consensus 1024 pC~ngG~C~~~~-~~~~C~C~~~g~~G~~C~~~~~ 1057 (1245)
T 3qcw_A 1024 SCSNQGVCLQQW-DGFSCDCSMTSFSGPLCNDPGT 1057 (1245)
T ss_dssp SSSSSCEEEEET-TEEEEECTTSSCBSTTSCBCCC
T ss_pred cCCCCCEeCCCC-CCCEEECCCCCCCCCCccCCCc
Confidence 799999999887 46999999 6999999988653
No 203
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=93.60 E-value=0.015 Score=48.70 Aligned_cols=32 Identities=25% Similarity=0.716 Sum_probs=26.7
Q ss_pred CCCCCCCC--CCCC-ccccCCCcceecCCCCCCCCC
Q psy951 135 APNPCSQS--PCSH-LCLVIPGGYQCACPENATPKL 167 (428)
Q Consensus 135 ~~n~C~~~--~C~~-~C~~~~~~~~C~C~~g~~~~~ 167 (428)
.+|+|..+ +|++ +|++.+++|+|.|++|| .+.
T Consensus 106 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy-~g~ 140 (147)
T 2w86_A 106 DIDECEVFPGVCKNGLCVNTRGSFKCQCPSGM-TLD 140 (147)
T ss_dssp ECCHHHHSTTCSSSSEEEEETTEEEEECCTTC-CBC
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCC-ccC
Confidence 57888754 5987 99999999999999999 443
No 204
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=93.45 E-value=0.044 Score=36.95 Aligned_cols=23 Identities=35% Similarity=0.866 Sum_probs=19.3
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCcc
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAG 215 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G 215 (428)
+|. ++|++.. |+|.|.|++||.+
T Consensus 21 ~C~--~~C~n~~-Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 21 QCQ--HLCHNYV-GGYFCSCRPGYEL 43 (53)
T ss_dssp TTS--SEEEEET-TEEEEECSTTCEE
T ss_pred CCC--CEeECCC-CCeEEECCCCCeE
Confidence 454 5999988 6899999999984
No 205
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=93.18 E-value=0.068 Score=41.05 Aligned_cols=77 Identities=21% Similarity=0.578 Sum_probs=47.6
Q ss_pred CCCCCCCCCC--cccc-CCCcceecCCCCCCCCCCCCCCcccccCcc-CCCCCCCCCCCCCCCEEeeCCC----CceEec
Q psy951 137 NPCSQSPCSH--LCLV-IPGGYQCACPENATPKLPGVAEIRCSAAVE-RPRPLPRVCQCQNGGMCAESET----GDLTCN 208 (428)
Q Consensus 137 n~C~~~~C~~--~C~~-~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~-~~~~~~~~c~C~ngg~C~~~~~----g~~~C~ 208 (428)
..|....|.. .|.. .++..+|.|..|| .. .+..|..... .|..... -|.-...|..... +...|.
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy-~g----dg~~Cv~~~~~sC~~nNG--GCd~nA~C~~~~~~~~~~ki~C~ 77 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNY-KQ----EGDKCVENPNPTCNENNG--GCDADAKCTEEDSGSNGKKITCE 77 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTE-EE----ETTEEEECSCCCSTTGGG--GCCTTEEEECCSCSSSSCCCEEE
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCe-ec----CCCeEeeCCCCChhhcCC--CcCCCceeEecCCcccCCceEeE
Confidence 3455555544 6665 3578899999999 32 3467876532 1111000 2444458987754 679999
Q ss_pred CCCCCc-----cCccCC
Q psy951 209 CRQDFA-----GTFCEN 220 (428)
Q Consensus 209 C~~gy~-----G~~Ce~ 220 (428)
|.+||+ |.+|..
T Consensus 78 C~~g~~~~~~~gvf~~~ 94 (99)
T 1ob1_C 78 CTKPDSYPLFDGIFCSH 94 (99)
T ss_dssp ECSTTCCEEGGGTEECC
T ss_pred eCCCCcccceeEEEecc
Confidence 999966 666643
No 206
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.08 E-value=1.9 Score=39.57 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=65.0
Q ss_pred CCCCeEEEEEcC-CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCe-EEEEeCCCCccceeeeec
Q psy951 7 GASPRIESAWMD-GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNR-QTILSGSDKLQHPISLDV 84 (428)
Q Consensus 7 ~~~~~I~~a~~D-G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~-~~i~~~~~~~~~p~~l~~ 84 (428)
|...+|.+.+++ |+-.+.+ ...-....||+++ .+ +||-++...+++...+.+.... ..+-.. ..+.+|+.
T Consensus 72 G~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~----~eGwGLt~ 143 (268)
T 3nok_A 72 GHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GE-RLYQLTWTEGLLFTWSGMPPQRERTTRYS----GEGWGLCY 143 (268)
T ss_dssp TTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SS-CEEEEESSSCEEEEEETTTTEEEEEEECS----SCCCCEEE
T ss_pred CCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CC-EEEEEEccCCEEEEEECCcCcEEEEEeCC----CceeEEec
Confidence 444467777765 6655555 4333455778887 46 8999999999999999875443 344332 35689998
Q ss_pred cccEEEEEeCCCCceeeeccCC
Q psy951 85 FENNIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 85 ~~~~lYwtD~~~~~I~~~~~~g 106 (428)
.+++||-+| ...+|...+..+
T Consensus 144 Dg~~L~vSd-Gs~~l~~iDp~T 164 (268)
T 3nok_A 144 WNGKLVRSD-GGTMLTFHEPDG 164 (268)
T ss_dssp ETTEEEEEC-SSSEEEEECTTT
T ss_pred CCCEEEEEC-CCCEEEEEcCCC
Confidence 899999998 477888888664
No 207
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.96 E-value=0.055 Score=45.17 Aligned_cols=60 Identities=18% Similarity=0.412 Sum_probs=41.6
Q ss_pred CCCC--ccccCC--Ccc-eecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCc
Q psy951 143 PCSH--LCLVIP--GGY-QCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTF 217 (428)
Q Consensus 143 ~C~~--~C~~~~--~~~-~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~ 217 (428)
+|+| .|+... .++ .|.|++|| .|..|+.... ..|....+..|.+.+....+|..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~-------~G~~Cei~~~--------------~~C~~g~G~~YrG~~s~T~sG~~ 72 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKF-------GGQHCEIDKS--------------KTCYEGNGHFYRGKASTDTMGRP 72 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTE-------ESTTSCEESS--------------CCEECTTCTTCCSCCCBBTTSCB
T ss_pred CCCCCCCcCCCccccCCccccCCCCC-------CCCceecccc--------------ccCCCCCccccccceecCCcCCc
Confidence 6776 786652 455 89999999 6788875432 13444444568888888889999
Q ss_pred cCCCCC
Q psy951 218 CENYTG 223 (428)
Q Consensus 218 Ce~~~~ 223 (428)
|+.=..
T Consensus 73 Cq~W~s 78 (145)
T 2i9a_A 73 CLPWNS 78 (145)
T ss_dssp CCCTTS
T ss_pred ccCCcc
Confidence 976443
No 208
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.86 E-value=1.8 Score=39.87 Aligned_cols=96 Identities=7% Similarity=-0.005 Sum_probs=67.1
Q ss_pred CCcceeeeecCccceeecccccc--ceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEe--c-----cccce
Q psy951 302 NGPEIRAYETHKRRFRDVISDER--RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVIS--D-----ERRIE 372 (428)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~--~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~--~-----~~~p~ 372 (428)
....+..++.........++... .+.+++++|..+++|-+.....+|+.-.+.. .+....+. . ...|.
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~~~~~~~~~~~~~~~~~~~~~ 95 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---CKNTFHANLSSVPGEVGRSMY 95 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEESCCSTTEEEECSS
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC---CcEEEEEEccccccccccccc
Confidence 44556666665555444443333 6899999999999999988788888877754 22222222 1 23489
Q ss_pred eeeeeccCCeEEEEeCC-----------CCcEEEEEccC
Q psy951 373 ALDIDPVDEIIYWVDSY-----------DRNIRRSFMLE 400 (428)
Q Consensus 373 glavD~~~~~lYwtd~~-----------~~~I~~~~~~g 400 (428)
+++++..++.||.+... ...|.+.++..
T Consensus 96 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 96 SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred ceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 99999999999998854 46899988876
No 209
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=92.75 E-value=0.039 Score=51.15 Aligned_cols=30 Identities=23% Similarity=0.707 Sum_probs=25.9
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCc--cCccCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFA--GTFCEN 220 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~--G~~Ce~ 220 (428)
+|..++.|++.. |+|.|.|++||. |..|..
T Consensus 14 ~C~~~a~C~Nt~-Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 14 QCSVHAECRDYA-TGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp GSCTTEEEEECS-SCEEEEECTTEEECSSSEEE
T ss_pred CCCCCCEeEcCC-CCeEEEcCCCCCCCCCcCCC
Confidence 688889999988 689999999999 667864
No 210
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.50 E-value=3.1 Score=37.63 Aligned_cols=89 Identities=10% Similarity=-0.021 Sum_probs=64.0
Q ss_pred CeEEEEEcC-CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCe-EEEEeCCCCccceeeeecccc
Q psy951 10 PRIESAWMD-GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNR-QTILSGSDKLQHPISLDVFEN 87 (428)
Q Consensus 10 ~~I~~a~~D-G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~-~~i~~~~~~~~~p~~l~~~~~ 87 (428)
+.|.+.+++ |+-.+.+-...-..+.||+++ .+ +||-++...+++...+.+.... .++-.. ..+.+|+..++
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~-~ly~ltw~~~~v~v~D~~tl~~~~ti~~~----~~Gwglt~dg~ 115 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RD-RLIQLTWRNHEGFVYDLATLTPRARFRYP----GEGWALTSDDS 115 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TT-EEEEEESSSSEEEEEETTTTEEEEEEECS----SCCCEEEECSS
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CC-EEEEEEeeCCEEEEEECCcCcEEEEEeCC----CCceEEeeCCC
Confidence 478888876 544444433333455778887 56 9999999999999999865443 444443 36789999999
Q ss_pred EEEEEeCCCCceeeeccCC
Q psy951 88 NIYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 88 ~lYwtD~~~~~I~~~~~~g 106 (428)
+||-+|- ..+|...+...
T Consensus 116 ~L~vSdg-s~~l~~iDp~t 133 (243)
T 3mbr_X 116 HLYMSDG-TAVIRKLDPDT 133 (243)
T ss_dssp CEEEECS-SSEEEEECTTT
T ss_pred EEEEECC-CCeEEEEeCCC
Confidence 9999994 67888888664
No 211
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=92.21 E-value=0.045 Score=40.29 Aligned_cols=35 Identities=26% Similarity=0.637 Sum_probs=24.6
Q ss_pred CCCCCC---CCCCCC-ccccCC--CcceecCCCCCCCCCCCCCCcccc
Q psy951 135 APNPCS---QSPCSH-LCLVIP--GGYQCACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 135 ~~n~C~---~~~C~~-~C~~~~--~~~~C~C~~g~~~~~~~~~g~~C~ 176 (428)
..++|. ++.|.| .|.-.. +.+.|.|++|| +|.+|+
T Consensus 36 ~~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GY-------tG~RCE 76 (79)
T 1xdt_R 36 KRDPCLRKYKDFCIHGECKYVKELRAPSCICHPGY-------HGERCH 76 (79)
T ss_dssp ---CTTTTTTTCCSSEEECCBGGGTBCCEEECTTE-------ESTTCC
T ss_pred cCCCCCccccCcCCCCEeeeecCCCCeEEEcCCCc-------cccccc
Confidence 346777 567888 885333 67899999999 678885
No 212
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=91.78 E-value=0.034 Score=37.62 Aligned_cols=28 Identities=25% Similarity=0.545 Sum_probs=21.1
Q ss_pred CCCC--cccc----CCCcceecCCCCCCCCCCCCCCccccc
Q psy951 143 PCSH--LCLV----IPGGYQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 143 ~C~~--~C~~----~~~~~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
+|.| +|+. ..++|.|.|++|| .|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf-------~G~~Ce~ 48 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGF-------MGQRCEY 48 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTE-------ESTTSCE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCC-------cCCCCcc
Confidence 5666 6775 2457999999999 6788864
No 213
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=91.78 E-value=1.1 Score=42.55 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=64.1
Q ss_pred CCcCCCCCCceeeeecCCcceeeeecC-ccceeecc--ccccceeEEeeccCCCEEE--EEe-------c-----CCCeE
Q psy951 286 PAFNNGASLGLTIVYSNGPEIRAYETH-KRRFRDVI--SDERRIEALDIDPVDEIIY--WVD-------S-----YDRNI 348 (428)
Q Consensus 286 p~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~~i--~~~~~~~~l~~d~~~~~ly--Wtd-------~-----~~~~I 348 (428)
|.+.+.++.+..+|..+...+..++.. ......+. +....|..++++|..++|| =++ . ...++
T Consensus 42 ~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v 121 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG 121 (365)
T ss_dssp CSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred CcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceE
Confidence 333333444444554333366666654 33222221 1113477899999888543 333 1 34444
Q ss_pred EEeeeccccCCceE-EE--E--eccccceeeeeeccCCeEEEEeCCCCcEEEEEcc
Q psy951 349 RRSFMLEAQKGQVQ-AV--I--SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFML 399 (428)
Q Consensus 349 ~ra~l~g~~~~~~~-~i--~--~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~ 399 (428)
.--.++.. ++.. .+ . .....|.+++++..++.||.+|.+.+.|.+.+++
T Consensus 122 ~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 122 NVFSVSET--GKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp EEEEECTT--CCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEccCCC--CcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEEC
Confidence 44444321 1122 11 1 1346799999999999999999988899999987
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=91.43 E-value=1.2 Score=43.90 Aligned_cols=96 Identities=2% Similarity=-0.158 Sum_probs=66.3
Q ss_pred cceeeeecCccceeeccccccceeEEeeccCCCEEEEEecC---------CCeEEEeeeccccCCceEEEEec-------
Q psy951 304 PEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY---------DRNIRRSFMLEAQKGQVQAVISD------- 367 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~---------~~~I~ra~l~g~~~~~~~~i~~~------- 367 (428)
..+..++.........++--..| +++++|..++||-++.. ...|......- ......|.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t--~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT--FLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT--CCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC--CcEEEEEECCCcccccc
Confidence 57777888877777777666778 99999999999999853 22344333322 1111112111
Q ss_pred cccceeeeeeccCCeEEEEeCC-CCcEEEEEccCcc
Q psy951 368 ERRIEALDIDPVDEIIYWVDSY-DRNIRRSFMLEAQ 402 (428)
Q Consensus 368 ~~~p~glavD~~~~~lYwtd~~-~~~I~~~~~~g~~ 402 (428)
...|.+++++..+++||.+... ...|.+.++...+
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 2579999999999999999874 6678888876543
No 215
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=91.15 E-value=0.099 Score=35.68 Aligned_cols=26 Identities=23% Similarity=0.776 Sum_probs=21.3
Q ss_pred CEEeeCCCCceEecCCCCCc----cCccCCC
Q psy951 195 GMCAESETGDLTCNCRQDFA----GTFCENY 221 (428)
Q Consensus 195 g~C~~~~~g~~~C~C~~gy~----G~~Ce~~ 221 (428)
+.|++.+ |+|+|.|++||. |..|+..
T Consensus 13 ~~C~nt~-Gsy~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 13 QFCHEEQ-NSVVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp SEEEEET-TEEEEECCTTEEECTTSSCEEES
T ss_pred cEeEcCC-CCeEEeCCCCCEECCCCCeeccC
Confidence 4899987 789999999997 5677653
No 216
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=90.84 E-value=0.21 Score=48.81 Aligned_cols=38 Identities=24% Similarity=0.552 Sum_probs=26.5
Q ss_pred CCCCCCCCCCC-EEeeCC---------------CCceEec-CCCCCccCccCCCC
Q psy951 185 LPRVCQCQNGG-MCAESE---------------TGDLTCN-CRQDFAGTFCENYT 222 (428)
Q Consensus 185 ~~~~c~C~ngg-~C~~~~---------------~g~~~C~-C~~gy~G~~Ce~~~ 222 (428)
.+.+|+|.+++ .|...+ .+.-.|. |.+++.|.+||.-.
T Consensus 321 ~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~ 375 (403)
T 2y38_A 321 ECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCL 375 (403)
T ss_dssp CCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEEC
T ss_pred cccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCC
Confidence 34678897665 485321 2356995 99999999998643
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=90.76 E-value=4.7 Score=38.65 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=57.3
Q ss_pred Ccee---EEEcCCCCCEEEEEEC---------CCCeEEEEEcCCCCe-EEEEeCCCCccceeeeecccc-EEEEEeCCCC
Q psy951 32 HPTG---LSVDAAMDHTLYWVDS---------KLNTIESVRHDGRNR-QTILSGSDKLQHPISLDVFEN-NIYWLARDTG 97 (428)
Q Consensus 32 ~P~g---lavD~~~~~~lYW~d~---------~~~~I~~~~ldG~~~-~~i~~~~~~~~~p~~l~~~~~-~lYwtD~~~~ 97 (428)
.|.| +++++..+ +||-+.. ..+.|..+++..... +.+.-+ ..+..+.++..+. .+|-+.+..+
T Consensus 265 ~p~g~~~~~~s~d~~-~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~v~~~~~~ 341 (373)
T 2mad_H 265 RPGGWQQVAYLKSSD-GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISVAQDGGPDLYALSAGTE 341 (373)
T ss_pred ecCceEeEEECCCCC-EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC--CCcCeEEECCCCCeEEEEEcCCCC
Confidence 4777 89998888 9998754 245799998876544 334322 2333344444566 5777666678
Q ss_pred ceeeeccCCCCceeeeccCCCCCcccccc
Q psy951 98 SLYKQDKFGRGVPVLISKDLVNPSGVKAY 126 (428)
Q Consensus 98 ~I~~~~~~g~~~~~~~~~~~~~p~~I~v~ 126 (428)
.|..++..+......+...-..|.+|..+
T Consensus 342 ~V~ViD~~t~~vv~~i~~vG~~P~~~~~~ 370 (373)
T 2mad_H 342 VLHIYDAGAGDQDQSTVELGSGPQVLSVM 370 (373)
T ss_pred eEEEEECCCCCEEeeecCCCCCCcEEEEc
Confidence 89999987544433322223457666654
No 218
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.70 E-value=0.15 Score=34.04 Aligned_cols=35 Identities=29% Similarity=0.654 Sum_probs=25.7
Q ss_pred CCCCCCC---CCCCC-cccc--CCCcceecCCCCCCCCCCCCCCcccc
Q psy951 135 APNPCSQ---SPCSH-LCLV--IPGGYQCACPENATPKLPGVAEIRCS 176 (428)
Q Consensus 135 ~~n~C~~---~~C~~-~C~~--~~~~~~C~C~~g~~~~~~~~~g~~C~ 176 (428)
..++|.. +.|.| .|.- ..+.+.|.|+.|| .|.+|+
T Consensus 8 ~~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy-------~G~RCe 48 (50)
T 2rnl_A 8 KKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEY-------FGERCG 48 (50)
T ss_dssp CCCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSC-------CSSSCC
T ss_pred cCcccCchhhCcCCCCEEEEecCCCCeeEECCCCc-------cccccc
Confidence 4567764 46777 8873 3367899999999 678876
No 219
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=90.31 E-value=0.035 Score=38.51 Aligned_cols=29 Identities=24% Similarity=0.521 Sum_probs=22.0
Q ss_pred CCCC--cccc----CCCcceecCCCCCCCCCCCCCCcccccC
Q psy951 143 PCSH--LCLV----IPGGYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 143 ~C~~--~C~~----~~~~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
+|.| .|.. ...+|.|.|++|| .|.+|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf-------~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGF-------MGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTE-------ESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCC-------ccCCCccc
Confidence 6776 7773 3357899999999 67888754
No 220
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=90.14 E-value=0.18 Score=56.92 Aligned_cols=31 Identities=32% Similarity=0.892 Sum_probs=27.7
Q ss_pred CCCCCCEEeeCCCCceEecCC-CCCccCccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCR-QDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~-~gy~G~~Ce~~ 221 (428)
+|.|+|.|.... +.|.|.|+ .||.|..|+..
T Consensus 626 pC~ngg~C~~~~-~~~~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 626 PCKNNGMCRDGW-NRYVCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp CCCTTCEEEECS-SSEEEECTTTTEESTTSCEE
T ss_pred CCCCCCEEeCCC-CCeEEECCCCCcccccCccc
Confidence 799999999876 57999999 79999999864
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=90.07 E-value=5.6 Score=39.42 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=62.8
Q ss_pred cceeeeecCccceeeccc---cccceeEEee--ccCCCEEEEEec-----CCCeEEEeeeccccCCceEEE-Eec-----
Q psy951 304 PEIRAYETHKRRFRDVIS---DERRIEALDI--DPVDEIIYWVDS-----YDRNIRRSFMLEAQKGQVQAV-ISD----- 367 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~---~~~~~~~l~~--d~~~~~lyWtd~-----~~~~I~ra~l~g~~~~~~~~i-~~~----- 367 (428)
..+..++.......+.++ .-..|+.|.| ||...++|-+.. .+.+|.....++..-...+++ +..
T Consensus 228 d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~ 307 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG 307 (462)
T ss_dssp CEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCS
T ss_pred CEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccc
Confidence 444445555433333332 2245777655 999999999987 777787766654110111222 111
Q ss_pred ------------cccceeeeeeccCCeEEEEeCCCCcEEEEEcc
Q psy951 368 ------------ERRIEALDIDPVDEIIYWVDSYDRNIRRSFML 399 (428)
Q Consensus 368 ------------~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~ 399 (428)
-..|.+|+|...++.||.+..+.+.|.+-+.+
T Consensus 308 ~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 308 NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 14589999999999999999999999998875
No 222
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=90.04 E-value=14 Score=35.54 Aligned_cols=80 Identities=15% Similarity=0.152 Sum_probs=57.4
Q ss_pred cceeEEeeccCCCEEEEEecC--CCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCC--CcEEEEEcc
Q psy951 324 RRIEALDIDPVDEIIYWVDSY--DRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYD--RNIRRSFML 399 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~--~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~--~~I~~~~~~ 399 (428)
..+..+++.|..++|+.+... ..+|+...+++ ++...+... ..+..+++...++.|+++.... ..|.+.+++
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~---~~~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT---GGVQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT---CCEEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCC---CCEEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 356678999999999888654 34788877776 333333333 3788889988899898876543 379999999
Q ss_pred CcceeEEE
Q psy951 400 EAQKGQVQ 407 (428)
Q Consensus 400 g~~~~~l~ 407 (428)
|+..+.|.
T Consensus 387 g~~~~~l~ 394 (415)
T 2hqs_A 387 GRFKARLP 394 (415)
T ss_dssp SCCEEECC
T ss_pred CCcEEEee
Confidence 88777664
No 223
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=90.03 E-value=0.13 Score=35.68 Aligned_cols=27 Identities=22% Similarity=0.689 Sum_probs=21.5
Q ss_pred CEEeeCCCCceEecCCCCCc----cCccCCC
Q psy951 195 GMCAESETGDLTCNCRQDFA----GTFCENY 221 (428)
Q Consensus 195 g~C~~~~~g~~~C~C~~gy~----G~~Ce~~ 221 (428)
..|++.++|+|.|.|++||. |..|+..
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPA 41 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence 47998875689999999997 5678653
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.94 E-value=4.6 Score=36.92 Aligned_cols=88 Identities=11% Similarity=-0.049 Sum_probs=61.6
Q ss_pred eEEEEEcC-CCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCe-EEEEeCCCCccceeeeeccccE
Q psy951 11 RIESAWMD-GSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNR-QTILSGSDKLQHPISLDVFENN 88 (428)
Q Consensus 11 ~I~~a~~D-G~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~-~~i~~~~~~~~~p~~l~~~~~~ 88 (428)
.|.+.+++ |+-.+.+....-....||+++ .+ +||-++...+++...+.+.... ..+-.+ ..+.+++..+++
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~-~ly~ltw~~~~v~v~D~~t~~~~~ti~~~----~eG~glt~dg~~ 138 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGEGISDW--KD-KIVGLTWKNGLGFVWNIRNLRQVRSFNYD----GEGWGLTHNDQY 138 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEEEEEEE--TT-EEEEEESSSSEEEEEETTTCCEEEEEECS----SCCCCEEECSSC
T ss_pred eEEEEECCCCcEEEEEecCCccceeEEEEe--CC-EEEEEEeeCCEEEEEECccCcEEEEEECC----CCceEEecCCCE
Confidence 56666665 544444433233345778887 56 9999999999999999965443 444443 266889988999
Q ss_pred EEEEeCCCCceeeeccCC
Q psy951 89 IYWLARDTGSLYKQDKFG 106 (428)
Q Consensus 89 lYwtD~~~~~I~~~~~~g 106 (428)
||-+|- ..+|+..|...
T Consensus 139 L~~SdG-s~~i~~iDp~T 155 (262)
T 3nol_A 139 LIMSDG-TPVLRFLDPES 155 (262)
T ss_dssp EEECCS-SSEEEEECTTT
T ss_pred EEEECC-CCeEEEEcCCC
Confidence 999984 67788887664
No 225
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=89.82 E-value=2.3 Score=40.20 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=58.1
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Ee---ccccceeeeeeccCCeEEEEeCCCCcEEEEE
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--IS---DERRIEALDIDPVDEIIYWVDSYDRNIRRSF 397 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~---~~~~p~glavD~~~~~lYwtd~~~~~I~~~~ 397 (428)
...+.+++++|..++||-+|.+..+|....++. +++...+ +. ....|.+++++..++.||.+......|.+.+
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~--~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLA--SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECT--TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECC--CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 457899999999999999998888888887762 1222222 22 1456999999999999999998777899888
Q ss_pred cc
Q psy951 398 ML 399 (428)
Q Consensus 398 ~~ 399 (428)
++
T Consensus 222 ~~ 223 (365)
T 1jof_A 222 ID 223 (365)
T ss_dssp EC
T ss_pred Ee
Confidence 76
No 226
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=89.77 E-value=0.14 Score=43.17 Aligned_cols=37 Identities=24% Similarity=0.540 Sum_probs=29.3
Q ss_pred CCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCcccccCcc
Q psy951 137 NPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVE 180 (428)
Q Consensus 137 n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~ 180 (428)
.+|..++|+. .|....++|.|.|++|| .|..|+...+
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~-------~g~~C~~~~~ 158 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGY-------YGPQCQFVQV 158 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTC-------BSSSSCBC--
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCc-------cccccccccc
Confidence 4566778875 99999999999999999 6788987654
No 227
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.50 E-value=3.9 Score=39.57 Aligned_cols=97 Identities=9% Similarity=0.092 Sum_probs=66.8
Q ss_pred cceeEEeeccC----CCEEEEEecCCCeEEEee---e-ccccCCceEEEEec--cccceeeeeeccCCeEEEEeCCCCcE
Q psy951 324 RRIEALDIDPV----DEIIYWVDSYDRNIRRSF---M-LEAQKGQVQAVISD--ERRIEALDIDPVDEIIYWVDSYDRNI 393 (428)
Q Consensus 324 ~~~~~l~~d~~----~~~lyWtd~~~~~I~ra~---l-~g~~~~~~~~i~~~--~~~p~glavD~~~~~lYwtd~~~~~I 393 (428)
..+-+|++.|. .+.|||.--.+.++++.. | +++.....+.+-.. .....++++|-.+++||+++.....|
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI 299 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQV 299 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeE
Confidence 36778999988 889999999998999886 3 22211223333232 24455789998889999999999999
Q ss_pred EEEEccC-----cceeEEEecccCCCCCCCccccc
Q psy951 394 RRSFMLE-----AQKGQVQAGASRHQNGVPASSQR 423 (428)
Q Consensus 394 ~~~~~~g-----~~~~~l~~~~~~~~~~~p~~~~~ 423 (428)
.+-+-++ ..-++|.++. -+--|-++.+
T Consensus 300 ~~w~~~~~~~~~~n~~~l~~d~---~l~~pd~~~i 331 (381)
T 3q6k_A 300 SCWNTQKMPLRMKNTDVVYTSS---RFVFGTDISV 331 (381)
T ss_dssp EEEETTSCSBCGGGEEEEEECT---TCCSEEEEEE
T ss_pred EEEeCCCCccccCceEEEEECC---CccccCeEEE
Confidence 9999887 3345555443 3334555544
No 228
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=89.38 E-value=0.17 Score=33.75 Aligned_cols=30 Identities=27% Similarity=0.587 Sum_probs=21.8
Q ss_pred CCCCC-ccccCC--CcceecCCCCCCCCCCCCCCcccccC
Q psy951 142 SPCSH-LCLVIP--GGYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 142 ~~C~~-~C~~~~--~~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
+.|.| .|.-.. +.+.|.|++|| .|.+|+..
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy-------~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGY-------VGARCEHA 46 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCC-------cccCCCce
Confidence 35666 676433 67899999999 67888643
No 229
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=89.20 E-value=0.16 Score=36.64 Aligned_cols=18 Identities=22% Similarity=0.558 Sum_probs=15.5
Q ss_pred CCCCCCEEeeCCCCceEec
Q psy951 190 QCQNGGMCAESETGDLTCN 208 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~ 208 (428)
+|.++++|++.. |+|.|.
T Consensus 12 ~C~~~~~C~Nt~-Gsy~C~ 29 (71)
T 2kl7_A 12 ACKGEMKCINHY-GGYLCL 29 (71)
T ss_dssp SCTTEEEEEETT-CCEEEE
T ss_pred CCCCCCEeECCC-CCeEec
Confidence 577888999998 689999
No 230
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=89.11 E-value=0.18 Score=34.11 Aligned_cols=27 Identities=19% Similarity=0.688 Sum_probs=21.4
Q ss_pred CEEeeCCCCceEecCCCCCc----cCccCCC
Q psy951 195 GMCAESETGDLTCNCRQDFA----GTFCENY 221 (428)
Q Consensus 195 g~C~~~~~g~~~C~C~~gy~----G~~Ce~~ 221 (428)
..|++..+++|.|.|++||. |..|+..
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~ 41 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 41 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCcccCC
Confidence 47988875479999999997 6678653
No 231
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=88.73 E-value=0.16 Score=49.95 Aligned_cols=36 Identities=25% Similarity=0.729 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCC--ccccCCCcceecCCC-CCCCCCCCCCCccccc
Q psy951 135 APNPCSQSPCSH--LCLVIPGGYQCACPE-NATPKLPGVAEIRCSA 177 (428)
Q Consensus 135 ~~n~C~~~~C~~--~C~~~~~~~~C~C~~-g~~~~~~~~~g~~C~~ 177 (428)
..++|..++|++ .|.+...+|.|.|+. || .|..|+.
T Consensus 184 ~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~-------~G~~C~~ 222 (410)
T 3asi_A 184 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSF-------SGPLCND 222 (410)
T ss_dssp CSSCCCTTSSSTTCEEEECSSSEEEECTTTSE-------ESTTSCE
T ss_pred CCCCcccccCCCCCEecCCCCCceEeccCCcc-------cCCCCCC
Confidence 347899999998 999999999999996 99 6788875
No 232
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=88.67 E-value=0.16 Score=34.06 Aligned_cols=26 Identities=19% Similarity=0.724 Sum_probs=20.3
Q ss_pred CEEeeCCCCceEecCCCCCc----cCccCCC
Q psy951 195 GMCAESETGDLTCNCRQDFA----GTFCENY 221 (428)
Q Consensus 195 g~C~~~~~g~~~C~C~~gy~----G~~Ce~~ 221 (428)
+.|++.. |+|.|.|++||. |..|+..
T Consensus 10 ~~C~n~~-gs~~C~C~~Gy~L~~d~~tC~di 39 (51)
T 1kig_L 10 QFCREER-SEVRCSCAHGYVLGDDSKSCVST 39 (51)
T ss_dssp SCCCEET-TEECCCCCTTEEECTTSSCEEEC
T ss_pred CEeEcCC-CCeEEeCCCCcEECCCCCccccC
Confidence 3587776 789999999997 6678653
No 233
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=88.47 E-value=0.22 Score=33.24 Aligned_cols=30 Identities=27% Similarity=0.544 Sum_probs=21.2
Q ss_pred CCCCC-ccc--cCCCcceecCCCCCCCCCCCCCCcccccC
Q psy951 142 SPCSH-LCL--VIPGGYQCACPENATPKLPGVAEIRCSAA 178 (428)
Q Consensus 142 ~~C~~-~C~--~~~~~~~C~C~~g~~~~~~~~~g~~C~~~ 178 (428)
+.|.| .|. ...+.+.|.|++|| .|.+|+..
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy-------~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGY-------IGARCERV 46 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTE-------ETTTTCEE
T ss_pred CcccCCEEEeEcCCCCeEEECCCCc-------ccCCCCee
Confidence 35555 664 33367899999999 67888753
No 234
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=88.08 E-value=0.2 Score=35.96 Aligned_cols=27 Identities=19% Similarity=0.688 Sum_probs=21.3
Q ss_pred CEEeeCCCCceEecCCCCCc----cCccCCC
Q psy951 195 GMCAESETGDLTCNCRQDFA----GTFCENY 221 (428)
Q Consensus 195 g~C~~~~~g~~~C~C~~gy~----G~~Ce~~ 221 (428)
..|.+..+++|.|.|++||. |..|+..
T Consensus 17 h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~ 47 (69)
T 1kli_L 17 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 47 (69)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred CEeEcCCCCCEEEeCCCCCeECCCCCcccCc
Confidence 47998885489999999997 6677653
No 235
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=87.87 E-value=2.5 Score=40.42 Aligned_cols=78 Identities=10% Similarity=-0.020 Sum_probs=56.9
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Ee--ccc-cceeeeeeccC---CeEEEEeCCCCcEEE
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--IS--DER-RIEALDIDPVD---EIIYWVDSYDRNIRR 395 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~--~~~-~p~glavD~~~---~~lYwtd~~~~~I~~ 395 (428)
.++.++++|+..++||-.+.. .-|.|...+.......+++ +. .+. .|+||||+... +.|+-++.+.++.-+
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred CCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 479999999999999999976 4598888764311222333 22 344 89999997544 479999999988888
Q ss_pred EEccCcc
Q psy951 396 SFMLEAQ 402 (428)
Q Consensus 396 ~~~~g~~ 402 (428)
.+..++.
T Consensus 259 ydr~~~~ 265 (355)
T 3amr_A 259 YDRQGKN 265 (355)
T ss_dssp EESSTTC
T ss_pred EECCCCC
Confidence 8886543
No 236
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=86.59 E-value=0.45 Score=40.41 Aligned_cols=27 Identities=26% Similarity=0.870 Sum_probs=21.4
Q ss_pred CCCCCEEeeCCCCceEecCCCCCc----cCccCC
Q psy951 191 CQNGGMCAESETGDLTCNCRQDFA----GTFCEN 220 (428)
Q Consensus 191 C~ngg~C~~~~~g~~~C~C~~gy~----G~~Ce~ 220 (428)
|.+ .|.+.. |+|.|.|++||. |..|+.
T Consensus 137 C~~--~C~n~~-g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 137 CDH--HCHNHL-GGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp SSS--EEEEET-TEEEEECCTTEEECTTSSCEEE
T ss_pred cCC--ccccCC-CCEEEeCCCCcEECCCCCcccc
Confidence 554 799887 679999999998 566754
No 237
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=86.59 E-value=0.13 Score=50.51 Aligned_cols=34 Identities=26% Similarity=0.728 Sum_probs=0.0
Q ss_pred ccccCCCcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCC
Q psy951 147 LCLVIPGGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESE 201 (428)
Q Consensus 147 ~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~ 201 (428)
.|.+.. +|.|++|| .|..|+ .|.|.++|+|....
T Consensus 378 ~C~~~~---~C~C~~G~-------~G~~Ce-----------~c~C~~~g~C~~~~ 411 (426)
T 3zyj_B 378 TCHNNV---RCLCPAAY-------TGILCE-----------KLRCEEAGSCGSDS 411 (426)
T ss_dssp -------------------------------------------------------
T ss_pred CcCCCC---CCcCCCCC-------cCCCCc-----------CCCCCCCCcccCCC
Confidence 455443 89999999 566664 46899999998765
No 238
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=86.53 E-value=4.5 Score=39.77 Aligned_cols=103 Identities=9% Similarity=-0.056 Sum_probs=62.0
Q ss_pred EEEeeCCC---CeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEEC---------CCCeEEEEEcCCCCe-EE
Q psy951 2 FWAETGAS---PRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDS---------KLNTIESVRHDGRNR-QT 68 (428)
Q Consensus 2 yWtd~~~~---~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~---------~~~~I~~~~ldG~~~-~~ 68 (428)
|-++.+.. ..|...+.+-....--+..+ ..| ||++++..+ +||-++. ..+.|..++...... ..
T Consensus 88 yV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 88 YIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp EEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred EEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCC-EEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 55555321 24555554422211112223 379 999999988 9999986 356788887765433 33
Q ss_pred EEeC-C-----CCccceeeeeccccEEEEEeCC-CCceeeeccCCC
Q psy951 69 ILSG-S-----DKLQHPISLDVFENNIYWLARD-TGSLYKQDKFGR 107 (428)
Q Consensus 69 i~~~-~-----~~~~~p~~l~~~~~~lYwtD~~-~~~I~~~~~~g~ 107 (428)
|.-. . +..++-+.++..+++||.+... .+.|..++....
T Consensus 165 I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 165 IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp EEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 3221 1 0234445666678899999875 677888887643
No 239
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=86.33 E-value=0.16 Score=42.43 Aligned_cols=35 Identities=23% Similarity=0.750 Sum_probs=29.2
Q ss_pred CCCCCCCCCCC--ccccCCCcceecCCCCCCCCCCCCCCccccc
Q psy951 136 PNPCSQSPCSH--LCLVIPGGYQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 136 ~n~C~~~~C~~--~C~~~~~~~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
..+|...+|++ .|.+....|.|.|.+|| .|..|+.
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~-------~g~~Ce~ 155 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGF-------SGLKCEQ 155 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTE-------ESTTSCE
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCc-------cCccccc
Confidence 35677788887 99999999999999999 6677764
No 240
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=85.70 E-value=0.38 Score=46.57 Aligned_cols=62 Identities=23% Similarity=0.522 Sum_probs=37.3
Q ss_pred CcceecCCCCCCCCCCCCCCcccccCccC------------CCCCCCCCCCCCCC-EEeeC------CCCceEe-cCCCC
Q psy951 153 GGYQCACPENATPKLPGVAEIRCSAAVER------------PRPLPRVCQCQNGG-MCAES------ETGDLTC-NCRQD 212 (428)
Q Consensus 153 ~~~~C~C~~g~~~~~~~~~g~~C~~~~~~------------~~~~~~~c~C~ngg-~C~~~------~~g~~~C-~C~~g 212 (428)
+++.|.|..|| .|..|+.-... ....+.+|.|..++ .|... ..+.-+| .|.+|
T Consensus 270 ~~~~C~C~~nt-------~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n 342 (375)
T 4aqt_A 270 DKLMCNCKHNT-------YGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDN 342 (375)
T ss_dssp SCEEECCCTTE-------ESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTT
T ss_pred CCeeeeCcCCC-------cCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCC
Confidence 56788898888 56666532211 01124567775544 45321 1123578 59999
Q ss_pred CccCccCCC
Q psy951 213 FAGTFCENY 221 (428)
Q Consensus 213 y~G~~Ce~~ 221 (428)
++|..||.-
T Consensus 343 ~~G~~Ce~C 351 (375)
T 4aqt_A 343 TDGAKCERC 351 (375)
T ss_dssp EESTTSCEE
T ss_pred CcCCCCCCC
Confidence 999999863
No 241
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=85.64 E-value=0.6 Score=39.04 Aligned_cols=25 Identities=20% Similarity=0.555 Sum_probs=20.4
Q ss_pred CEEeeCCCCceEecCCCCCc----cCccCC
Q psy951 195 GMCAESETGDLTCNCRQDFA----GTFCEN 220 (428)
Q Consensus 195 g~C~~~~~g~~~C~C~~gy~----G~~Ce~ 220 (428)
+.|.+.. |.|.|.|++||. |..|+.
T Consensus 130 ~~C~n~~-g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 130 HFCNNFI-GGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp SEEEEET-TEEEEECCTTCEECTTSSCEEC
T ss_pred CcccCcC-CCEEEecCCCcEECCCCCcccc
Confidence 5798886 679999999999 566753
No 242
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.40 E-value=15 Score=35.52 Aligned_cols=92 Identities=10% Similarity=0.261 Sum_probs=63.5
Q ss_pred CEEEeeCCCCeEEEEEc----CCC---CcEEEEeCC-CCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCC-----CCeE
Q psy951 1 MFWAETGASPRIESAWM----DGS---HRRSLVMTG-VRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDG-----RNRQ 67 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~----DG~---~~~~l~~~~-~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG-----~~~~ 67 (428)
|||.-.... ++.+... |++ ..+.+-.++ .....++++|..++ .||+++...+.|.+-+.++ .+.+
T Consensus 238 LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~n~~ 315 (381)
T 3q6k_A 238 AYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNTQKMPLRMKNTD 315 (381)
T ss_dssp EEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEETTSCSBCGGGEE
T ss_pred EEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeCCCCccccCceE
Confidence 466665544 5666642 232 222222222 23445788987778 8999999999999999998 4668
Q ss_pred EEEeCCCCccceeeeecc-ccEEEEEeCC
Q psy951 68 TILSGSDKLQHPISLDVF-ENNIYWLARD 95 (428)
Q Consensus 68 ~i~~~~~~~~~p~~l~~~-~~~lYwtD~~ 95 (428)
+++... .+..|-++.+. +++||.+...
T Consensus 316 ~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 316 VVYTSS-RFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEEECT-TCCSEEEEEECTTSCEEEEECS
T ss_pred EEEECC-CccccCeEEECCCCeEEEEECc
Confidence 888776 78889888874 7789998644
No 243
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=85.15 E-value=8.9 Score=36.62 Aligned_cols=77 Identities=6% Similarity=-0.033 Sum_probs=51.8
Q ss_pred ccccceeEEee--ccCCC--EEEEEecCCCeEEEeee--ccccCCceEEEE--eccccceeeeeeccCCeEEEEeCCCCc
Q psy951 321 SDERRIEALDI--DPVDE--IIYWVDSYDRNIRRSFM--LEAQKGQVQAVI--SDERRIEALDIDPVDEIIYWVDSYDRN 392 (428)
Q Consensus 321 ~~~~~~~~l~~--d~~~~--~lyWtd~~~~~I~ra~l--~g~~~~~~~~i~--~~~~~p~glavD~~~~~lYwtd~~~~~ 392 (428)
..+..|.||.+ ++.++ ++|=++.. .++..-.+ .+..+...+.+- .--.+|+|+++|..++.||..+....
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G- 202 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA- 202 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce-
Confidence 34578889999 88777 57777655 55555444 221011222232 23458999999999999999999864
Q ss_pred EEEEEcc
Q psy951 393 IRRSFML 399 (428)
Q Consensus 393 I~~~~~~ 399 (428)
|.+.+.+
T Consensus 203 Iw~~da~ 209 (355)
T 3amr_A 203 IWKFSAE 209 (355)
T ss_dssp EEEEECS
T ss_pred EEEEeCC
Confidence 8888855
No 244
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=84.44 E-value=12 Score=37.87 Aligned_cols=96 Identities=7% Similarity=-0.025 Sum_probs=66.7
Q ss_pred CcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeec----
Q psy951 303 GPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDP---- 378 (428)
Q Consensus 303 ~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~---- 378 (428)
...+..++....+-...++.-..+++++|+|..++||-++.. .+|..-.++.. +......+..-..|.+++++.
T Consensus 158 d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~-t~~~~~~i~~g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAK-EPTKVAEIKIGIEARSVESSKFKGY 235 (543)
T ss_dssp GTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSS-SCEEEEEEECCSEEEEEEECCSTTC
T ss_pred CCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCC-CCcEEEEEecCCCcceEEeCCCcCC
Confidence 345666666655544555433348999999999999999876 77877777421 122222233345799999998
Q ss_pred cCCeEEEEeCCCCcEEEEEccC
Q psy951 379 VDEIIYWVDSYDRNIRRSFMLE 400 (428)
Q Consensus 379 ~~~~lYwtd~~~~~I~~~~~~g 400 (428)
.++.||-+......|.+.+...
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTT
T ss_pred CCCEEEEEEccCCeEEEEeccc
Confidence 8999999988777888876543
No 245
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=83.57 E-value=25 Score=31.77 Aligned_cols=73 Identities=10% Similarity=-0.019 Sum_probs=51.4
Q ss_pred cceeEEeecc-CCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEccCcc
Q psy951 324 RRIEALDIDP-VDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQ 402 (428)
Q Consensus 324 ~~~~~l~~d~-~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~ 402 (428)
..+.+++++| ..++||-+ ..+|..-.+.. .+....+..-..|.+++++..++.||.+.. ...|.+-+++...
T Consensus 255 ~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQ---RKLIKAANLDHTYYCVAFDKKGDKLYLGGT-FNDLAVFNPDTLE 327 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEECSSSSCEEEESB-SSEEEEEETTTTE
T ss_pred CcceeeEecCCCCCEEEEE---cCeEEEEECcc---CeEEEEEcCCCCccceEECCCCCEEEEecC-CCeEEEEeccccc
Confidence 4678899999 88888887 55777776654 323223333356899999999999998644 4689998886544
Q ss_pred e
Q psy951 403 K 403 (428)
Q Consensus 403 ~ 403 (428)
.
T Consensus 328 ~ 328 (349)
T 1jmx_B 328 K 328 (349)
T ss_dssp E
T ss_pred e
Confidence 3
No 246
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=83.50 E-value=11 Score=34.12 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=67.3
Q ss_pred EEeeCCCCeEEEEEcCCCCcEEEEe-CC----CCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCcc
Q psy951 3 WAETGASPRIESAWMDGSHRRSLVM-TG----VRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQ 77 (428)
Q Consensus 3 Wtd~~~~~~I~~a~~DG~~~~~l~~-~~----~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~ 77 (428)
.++.+...+|...+.+|+....+-. .. ...|.+++++.. + .++.++...++|...+.+|+....+-.. .
T Consensus 92 v~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G-~~lv~~~~~~~v~~~d~~G~~~w~~~~~----~ 165 (276)
T 3no2_A 92 VAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-G-NYLVPLFATSEVREIAPNGQLLNSVKLS----G 165 (276)
T ss_dssp EEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-S-CEEEEETTTTEEEEECTTSCEEEEEECS----S
T ss_pred EEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-C-CEEEEecCCCEEEEECCCCCEEEEEECC----C
Confidence 3444423367777788876544432 12 236778888864 4 4788999999999999998755554432 3
Q ss_pred ceeeeec-cccEEEEEeCCCCceeeeccC-CCC
Q psy951 78 HPISLDV-FENNIYWLARDTGSLYKQDKF-GRG 108 (428)
Q Consensus 78 ~p~~l~~-~~~~lYwtD~~~~~I~~~~~~-g~~ 108 (428)
.|+++.. .++.++.++..+++|...+.. |.-
T Consensus 166 ~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 166 TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp CCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 4555554 467888888888889888888 443
No 247
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=83.22 E-value=40 Score=33.80 Aligned_cols=75 Identities=7% Similarity=-0.032 Sum_probs=50.3
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccc---eeeee-eccCCeEEEEeC-CCCcEEEEE
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRI---EALDI-DPVDEIIYWVDS-YDRNIRRSF 397 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p---~glav-D~~~~~lYwtd~-~~~~I~~~~ 397 (428)
...+++++|||..+++|=+...+++|.-..+.. .+....+..-..| .|.++ +...+.+|.+.. +.++|.+.+
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t---g~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCC---CeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEE
Confidence 456889999999999998888888777644432 3222223312223 25544 556688888876 668899999
Q ss_pred ccC
Q psy951 398 MLE 400 (428)
Q Consensus 398 ~~g 400 (428)
.+.
T Consensus 400 ~~~ 402 (543)
T 1nir_A 400 TDP 402 (543)
T ss_dssp CCT
T ss_pred eCC
Confidence 875
No 248
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=83.04 E-value=12 Score=35.83 Aligned_cols=93 Identities=1% Similarity=-0.178 Sum_probs=59.6
Q ss_pred ceeeeecCccceeeccccccceeEEeeccCCCEEEEEecC---------CCeEEEeeeccccCCceEEEEec-------c
Q psy951 305 EIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY---------DRNIRRSFMLEAQKGQVQAVISD-------E 368 (428)
Q Consensus 305 ~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~---------~~~I~ra~l~g~~~~~~~~i~~~-------~ 368 (428)
.+..++.........++--..| +++++|..+++|-++.. +..|........ .....+-.. .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~--~~~~~i~~~~~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFDVG 124 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC--cEEEEEECCCccccccC
Confidence 4455666555544445544567 99999999999999853 234544443220 111111111 2
Q ss_pred ccceeeeeeccCCeEEEEeCC-CCcEEEEEccCc
Q psy951 369 RRIEALDIDPVDEIIYWVDSY-DRNIRRSFMLEA 401 (428)
Q Consensus 369 ~~p~glavD~~~~~lYwtd~~-~~~I~~~~~~g~ 401 (428)
..|.+++++..++.||.+... .+.|.+.+ ...
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCC
Confidence 469999999999999999865 57788877 443
No 249
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.22 E-value=1.5 Score=28.26 Aligned_cols=11 Identities=18% Similarity=0.151 Sum_probs=4.5
Q ss_pred HHhhheeecCC
Q psy951 249 ATVYYVWRKRP 259 (428)
Q Consensus 249 ~~~~~~~r~~~ 259 (428)
++.+++.|+|+
T Consensus 28 ~~~~~~~RRRr 38 (44)
T 2l2t_A 28 LTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHhhhhh
Confidence 33344444443
No 250
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.76 E-value=1.6 Score=28.18 Aligned_cols=11 Identities=18% Similarity=0.211 Sum_probs=4.3
Q ss_pred HHhhheeecCC
Q psy951 249 ATVYYVWRKRP 259 (428)
Q Consensus 249 ~~~~~~~r~~~ 259 (428)
++.+++.|+|+
T Consensus 29 ~~~~~~~RRr~ 39 (44)
T 2ks1_B 29 LGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHhhhhH
Confidence 33333444433
No 251
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=81.73 E-value=12 Score=36.11 Aligned_cols=96 Identities=5% Similarity=-0.095 Sum_probs=63.9
Q ss_pred cceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCC---------CeEEEeeeccccCCceE-EE-Eec-----
Q psy951 304 PEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYD---------RNIRRSFMLEAQKGQVQ-AV-ISD----- 367 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~---------~~I~ra~l~g~~~~~~~-~i-~~~----- 367 (428)
..+..++.........++--..|. ++++|..+++|=++... ..|....... .... .+ +..
T Consensus 59 ~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t---~~v~~~I~v~~g~r~~ 134 (386)
T 3sjl_D 59 TQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT---LLPTADIELPDAPRFL 134 (386)
T ss_dssp EEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---CCEEEEEEETTCCCCC
T ss_pred CEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC---CeEEEEEECCCccccc
Confidence 356667777766666666666675 99999999999998532 2333333322 2111 12 111
Q ss_pred -cccceeeeeeccCCeEEEEeCC-CCcEEEEEccCcce
Q psy951 368 -ERRIEALDIDPVDEIIYWVDSY-DRNIRRSFMLEAQK 403 (428)
Q Consensus 368 -~~~p~glavD~~~~~lYwtd~~-~~~I~~~~~~g~~~ 403 (428)
...|.+++++..++.||.+... ...|.+.++.....
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 2379999999999999999874 67788888765543
No 252
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=80.48 E-value=0.86 Score=39.29 Aligned_cols=16 Identities=25% Similarity=0.756 Sum_probs=13.5
Q ss_pred ceecCCCCCCCCCCCCCCccccc
Q psy951 155 YQCACPENATPKLPGVAEIRCSA 177 (428)
Q Consensus 155 ~~C~C~~g~~~~~~~~~g~~C~~ 177 (428)
.+|.|++|| .|..|+.
T Consensus 165 ~~C~C~~Gw-------~G~~C~~ 180 (188)
T 2ygo_A 165 RICECPDGF-------HGPHCEG 180 (188)
T ss_dssp SCEECCTTC-------BTTTTCB
T ss_pred CcccCcCCC-------CCCCCcC
Confidence 599999999 6788865
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=80.46 E-value=8.3 Score=39.54 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=60.2
Q ss_pred Cceeeee--cCCcceeeeecCccceee--ccccccceeEEee-c-cCCCEEEEEecCCC---------------eEEEee
Q psy951 294 LGLTIVY--SNGPEIRAYETHKRRFRD--VISDERRIEALDI-D-PVDEIIYWVDSYDR---------------NIRRSF 352 (428)
Q Consensus 294 ~~~~~~~--s~~~~~~~~~~~~~~~~~--~i~~~~~~~~l~~-d-~~~~~lyWtd~~~~---------------~I~ra~ 352 (428)
-|..+|. .....+..+++...+-.. .+++...|+++++ . |..+++|=+..... .=.-+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 3344555 334556777888766555 4567788999998 5 99999999852211 111223
Q ss_pred ecccc-CCceEEEEeccccceeeeeeccCCeEEEEeCCC
Q psy951 353 MLEAQ-KGQVQAVISDERRIEALDIDPVDEIIYWVDSYD 390 (428)
Q Consensus 353 l~g~~-~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~ 390 (428)
+|... +...++.+.+ +|+++++++.++.+|.|....
T Consensus 180 ID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp EETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCT
T ss_pred EECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCc
Confidence 44420 1112222223 899999999999999999765
No 254
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=80.41 E-value=8.6 Score=39.22 Aligned_cols=68 Identities=15% Similarity=0.076 Sum_probs=49.1
Q ss_pred ccccceeEEeeccCCCEEEEEecC---------------------CCeEEEeeecccc----CCceEEEE-e--------
Q psy951 321 SDERRIEALDIDPVDEIIYWVDSY---------------------DRNIRRSFMLEAQ----KGQVQAVI-S-------- 366 (428)
Q Consensus 321 ~~~~~~~~l~~d~~~~~lyWtd~~---------------------~~~I~ra~l~g~~----~~~~~~i~-~-------- 366 (428)
..+..|++++++|.++.||-+=.. ...|+|-..++.+ +-.+.+++ .
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 445579999999999999998321 1379999887632 11345443 1
Q ss_pred -------------ccccceeeeeeccCCeEEE-EeCC
Q psy951 367 -------------DERRIEALDIDPVDEIIYW-VDSY 389 (428)
Q Consensus 367 -------------~~~~p~glavD~~~~~lYw-td~~ 389 (428)
.|..|++|++|.. ++||+ ||.+
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~ 496 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGD 496 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCC
T ss_pred ccccCccCccccCccCCCCceEECCC-CCEEEEeCCC
Confidence 2689999999975 78999 9975
No 255
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.38 E-value=30 Score=35.10 Aligned_cols=96 Identities=10% Similarity=-0.092 Sum_probs=60.3
Q ss_pred EEEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcC-CCC--eEEEEeCCCCccc
Q psy951 2 FWAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHD-GRN--RQTILSGSDKLQH 78 (428)
Q Consensus 2 yWtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ld-G~~--~~~i~~~~~~~~~ 78 (428)
|.+..+.. .|...+.+......-+.. -..|.++++++..+ +||-++ ..+.|..+++. .+. ...+..+ ..
T Consensus 170 ~V~~~~~~-~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr-~lyv~~-~dg~V~viD~~~~t~~~v~~i~~G----~~ 241 (567)
T 1qks_A 170 SVTLRDAG-QIALIDGSTYEIKTVLDT-GYAVHISRLSASGR-YLFVIG-RDGKVNMIDLWMKEPTTVAEIKIG----SE 241 (567)
T ss_dssp EEEETTTT-EEEEEETTTCCEEEEEEC-SSCEEEEEECTTSC-EEEEEE-TTSEEEEEETTSSSCCEEEEEECC----SE
T ss_pred EEEeCCCC-eEEEEECCCCeEEEEEeC-CCCccceEECCCCC-EEEEEc-CCCeEEEEECCCCCCcEeEEEecC----CC
Confidence 33443333 566666553322222232 34799999999888 899887 46799999995 332 2333333 34
Q ss_pred eeeeecc------ccEEEEEeCCCCceeeeccC
Q psy951 79 PISLDVF------ENNIYWLARDTGSLYKQDKF 105 (428)
Q Consensus 79 p~~l~~~------~~~lYwtD~~~~~I~~~~~~ 105 (428)
|.++++. +.++|-+....+.|...+..
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 6666654 56899998877877777654
No 256
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=80.37 E-value=12 Score=36.00 Aligned_cols=100 Identities=9% Similarity=0.099 Sum_probs=68.2
Q ss_pred cceeeeecCccceeeccccccceeEEeeccCCCEEEEEecC--CCeEEEeeeccccCCceEEEEeccccceeeeeeccCC
Q psy951 304 PEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY--DRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDE 381 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~--~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~ 381 (428)
..+..++........+......+..+++.|..++|+.+... ..+|+...+++ .....+...-.....+++...++
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~---~~~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING---GAPQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS---SCCEECCCSSSEEEEEEECTTSS
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC---CCEEEEecCCCcccCeEECCCCC
Confidence 44666666655544455555677889999999988877543 34888888876 33333333344566788888899
Q ss_pred eEEEEeCC--CCcEEEEEccCcceeEE
Q psy951 382 IIYWVDSY--DRNIRRSFMLEAQKGQV 406 (428)
Q Consensus 382 ~lYwtd~~--~~~I~~~~~~g~~~~~l 406 (428)
.|+++... ...|.+.++++...+.|
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EEEEEECcCCceEEEEEECCCCCEEEe
Confidence 99987753 45799999887766544
No 257
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=79.97 E-value=9.8 Score=35.94 Aligned_cols=93 Identities=8% Similarity=0.055 Sum_probs=59.3
Q ss_pred eeeeecCccceeeccccccceeEEeeccCCCEEEEEecC---------CCeEEEeeeccccCCceEEE-Ee-----cccc
Q psy951 306 IRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY---------DRNIRRSFMLEAQKGQVQAV-IS-----DERR 370 (428)
Q Consensus 306 ~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~---------~~~I~ra~l~g~~~~~~~~i-~~-----~~~~ 370 (428)
+..++.........++.-..| +++++|..+++|=++.. +..|....+.. ......+ +. ....
T Consensus 33 v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t--~~~~~~i~~~~~~~~~g~~ 109 (361)
T 2oiz_A 33 VHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK--LTFEKEISLPPKRVQGLNY 109 (361)
T ss_dssp EEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT--CCEEEEEEECTTBCCBCCC
T ss_pred EEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC--CcEEEEEEcCccccccCCC
Confidence 344454444433445445678 99999999999998741 23455444332 1111222 21 1257
Q ss_pred ceeeeeeccCCeEEEEeCC-CCcEEEEEccCc
Q psy951 371 IEALDIDPVDEIIYWVDSY-DRNIRRSFMLEA 401 (428)
Q Consensus 371 p~glavD~~~~~lYwtd~~-~~~I~~~~~~g~ 401 (428)
|.+++++..++.||-+..+ .+.|.+.+++..
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 9999999999999999875 577888877644
No 258
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=79.61 E-value=27 Score=31.48 Aligned_cols=100 Identities=10% Similarity=0.045 Sum_probs=66.3
Q ss_pred EEeeCCCCeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcC-CCCeEEEEeCC---CCccc
Q psy951 3 WAETGASPRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHD-GRNRQTILSGS---DKLQH 78 (428)
Q Consensus 3 Wtd~~~~~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ld-G~~~~~i~~~~---~~~~~ 78 (428)
.++... .+|...+.+|+..-.+-.. ..|.+.+++.. + .++.++...++|...+.+ |+-.-.+-... ..+..
T Consensus 140 v~~~~~-~~v~~~d~~G~~~w~~~~~--~~~~~~~~~~~-g-~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~ 214 (276)
T 3no2_A 140 VPLFAT-SEVREIAPNGQLLNSVKLS--GTPFSSAFLDN-G-DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFF 214 (276)
T ss_dssp EEETTT-TEEEEECTTSCEEEEEECS--SCCCEEEECTT-S-CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSE
T ss_pred EEecCC-CEEEEECCCCCEEEEEECC--CCccceeEcCC-C-CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccc
Confidence 344433 3777777787665444322 47889888754 5 588888888899999999 87766665321 13455
Q ss_pred eeeeec-cccEEEEEeCC----------CCceeeeccCCC
Q psy951 79 PISLDV-FENNIYWLARD----------TGSLYKQDKFGR 107 (428)
Q Consensus 79 p~~l~~-~~~~lYwtD~~----------~~~I~~~~~~g~ 107 (428)
|.++.+ .++.+|-+++. ...++..+.+|.
T Consensus 215 ~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 215 VAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp EEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred cccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence 777774 48899999963 235667766653
No 259
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=79.56 E-value=4.6 Score=40.01 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=47.0
Q ss_pred cceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEE--Ee-c-c-------------ccceeeeeeccCCeEEEE
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAV--IS-D-E-------------RRIEALDIDPVDEIIYWV 386 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i--~~-~-~-------------~~p~glavD~~~~~lYwt 386 (428)
..|.+|.+.+..++||-++++...|..-.++.. ...+.+ +. + . ..|.+++|+..+++||+|
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~--~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP--FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVT 398 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSST--TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEE
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCC--CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEE
Confidence 468899999999999999999997776665431 222222 22 2 1 159999999999999999
Q ss_pred e
Q psy951 387 D 387 (428)
Q Consensus 387 d 387 (428)
.
T Consensus 399 N 399 (462)
T 2ece_A 399 N 399 (462)
T ss_dssp C
T ss_pred c
Confidence 9
No 260
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=79.52 E-value=26 Score=35.55 Aligned_cols=95 Identities=6% Similarity=0.015 Sum_probs=67.9
Q ss_pred cCCcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeec-cccCCceEEEEeccccceeeeee--
Q psy951 301 SNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFML-EAQKGQVQAVISDERRIEALDID-- 377 (428)
Q Consensus 301 s~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~-g~~~~~~~~i~~~~~~p~glavD-- 377 (428)
.....+..++.........++.-..|++++++|..+++|-++ .+..|....+. +. .....-+.--..|.+++++
T Consensus 174 ~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t--~~~v~~i~~G~~P~~ia~s~~ 250 (567)
T 1qks_A 174 RDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKE--PTTVAEIKIGSEARSIETSKM 250 (567)
T ss_dssp TTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSS--CCEEEEEECCSEEEEEEECCS
T ss_pred CCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEc-CCCeEEEEECCCCC--CcEeEEEecCCCCceeEEccc
Confidence 344677777777666555566666789999999999999876 45578777774 21 2222223323469999999
Q ss_pred --ccCCeEEEEeCCCCcEEEEEc
Q psy951 378 --PVDEIIYWVDSYDRNIRRSFM 398 (428)
Q Consensus 378 --~~~~~lYwtd~~~~~I~~~~~ 398 (428)
+.++.||.+......|.+.+.
T Consensus 251 ~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 251 EGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp TTCTTTEEEEEEEETTEEEEEET
T ss_pred cCCCCCEEEEEEccCCeEEEEEC
Confidence 589999999998888888763
No 261
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=78.36 E-value=16 Score=35.38 Aligned_cols=110 Identities=17% Similarity=0.191 Sum_probs=65.7
Q ss_pred CeEEEEEcCCCCcEEEEeCCC---------CCcee---EEEcCCCCCEEEEEEC---------CCCeEEEEEcCCCCeE-
Q psy951 10 PRIESAWMDGSHRRSLVMTGV---------RHPTG---LSVDAAMDHTLYWVDS---------KLNTIESVRHDGRNRQ- 67 (428)
Q Consensus 10 ~~I~~a~~DG~~~~~l~~~~~---------~~P~g---lavD~~~~~~lYW~d~---------~~~~I~~~~ldG~~~~- 67 (428)
+++..++++|...+++-.-.+ ..|.| +++|...+ +||-+.. ..++|..+++....+.
T Consensus 247 g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~-~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~ 325 (386)
T 3sjl_D 247 GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD-RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA 325 (386)
T ss_dssp SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT-EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCC-eEEEEeccccccccCCCCCEEEEEECCCCeEEE
Confidence 367788887766544321110 13555 89998888 9999863 1357888888665542
Q ss_pred EEEeCCCCccceeeeec--ccc-EEEEEeCCCCceeeeccCCCCceeeeccCCCCCccccc
Q psy951 68 TILSGSDKLQHPISLDV--FEN-NIYWLARDTGSLYKQDKFGRGVPVLISKDLVNPSGVKA 125 (428)
Q Consensus 68 ~i~~~~~~~~~p~~l~~--~~~-~lYwtD~~~~~I~~~~~~g~~~~~~~~~~~~~p~~I~v 125 (428)
.+.-+ ..|.+|.+ .+. .||-+.+..+.|...+.........+ ....+|..+.+
T Consensus 326 ~i~vg----~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i-~~~~~p~~l~~ 381 (386)
T 3sjl_D 326 KFEMG----HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV-NQLGHGPQVIT 381 (386)
T ss_dssp EEEEE----EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE-CCCCSSCCEEE
T ss_pred EEECC----CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe-cCCCCCceeEE
Confidence 23222 23445554 454 68888888888988887643322222 23355665543
No 262
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=77.64 E-value=47 Score=31.09 Aligned_cols=88 Identities=16% Similarity=0.153 Sum_probs=53.2
Q ss_pred cee---EEEcCCCCCEEEEEEC----------CCCeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEEEEEeCCCCce
Q psy951 33 PTG---LSVDAAMDHTLYWVDS----------KLNTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNIYWLARDTGSL 99 (428)
Q Consensus 33 P~g---lavD~~~~~~lYW~d~----------~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I 99 (428)
|.| +++++..+ +||-+.. ..+.|..+++......--+... . +.-+.++..+.+||-+.+ +.|
T Consensus 253 p~g~~~~a~~~dg~-~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-~-p~~ia~spdg~~l~v~n~--~~v 327 (361)
T 2oiz_A 253 PGGYNLVGLHRASG-RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-D-ALSMTIDQQRNLMLTLDG--GNV 327 (361)
T ss_dssp ECCSSCEEEETTTT-EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT-T-CCEEEEETTTTEEEEECS--SCE
T ss_pred cCCeeEEEEecCCC-eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC-C-eeEEEECCCCCEEEEeCC--CeE
Confidence 565 99998888 9998754 1357888888765433233432 3 333444456788998875 778
Q ss_pred eeeccCCC--CceeeeccCCCCCccccc
Q psy951 100 YKQDKFGR--GVPVLISKDLVNPSGVKA 125 (428)
Q Consensus 100 ~~~~~~g~--~~~~~~~~~~~~p~~I~v 125 (428)
...+.... .....+...-..|.++.+
T Consensus 328 ~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp EEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred EEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 88877644 222222222345666654
No 263
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=76.73 E-value=2.3 Score=27.37 Aligned_cols=14 Identities=14% Similarity=0.048 Sum_probs=5.6
Q ss_pred HHHHHhhheeecCC
Q psy951 246 LVSATVYYVWRKRP 259 (428)
Q Consensus 246 ~~~~~~~~~~r~~~ 259 (428)
+.++..+++.||++
T Consensus 27 ~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 27 LGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHCS
T ss_pred HHHHHHhheehhhh
Confidence 33333344444444
No 264
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=76.69 E-value=37 Score=29.44 Aligned_cols=82 Identities=17% Similarity=0.105 Sum_probs=56.3
Q ss_pred ccceeEEeeccCCCEEEEEec--CCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCC----------C
Q psy951 323 ERRIEALDIDPVDEIIYWVDS--YDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSY----------D 390 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~--~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~----------~ 390 (428)
...+..++++|..++|+.+.. +..+|+...+++ .....+......+..++++..++.|+++... .
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG---SSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS---SCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCC---CCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 345678899999888888754 334788777666 3333333334556678888888989887652 2
Q ss_pred CcEEEEEccCcceeEEE
Q psy951 391 RNIRRSFMLEAQKGQVQ 407 (428)
Q Consensus 391 ~~I~~~~~~g~~~~~l~ 407 (428)
..|.+.++++...+.+.
T Consensus 249 ~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEEETTSCSCEEEE
T ss_pred eEEEEEecCCCCceeee
Confidence 46889999887666555
No 265
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=75.61 E-value=44 Score=29.82 Aligned_cols=78 Identities=3% Similarity=-0.077 Sum_probs=54.7
Q ss_pred ccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEccCcc
Q psy951 323 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQ 402 (428)
Q Consensus 323 ~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~ 402 (428)
...+.+++++|..++||-+ ..+|..-.+.. .+....+..-..|.+++++..++.||.+ .....|.+.++....
T Consensus 240 ~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA---YNVLESFDLEK---NASIKRVPLPHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLE 312 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCC
T ss_pred CCceeeEEECCCCCEEEEe---CCeEEEEECCC---CcCcceecCCCceeeEEECCCCCEEEEE-cCCCcEEEEECcCCc
Confidence 3467889999999999887 36677666654 2232333334579999999999889987 446689999886554
Q ss_pred eeEEE
Q psy951 403 KGQVQ 407 (428)
Q Consensus 403 ~~~l~ 407 (428)
....+
T Consensus 313 ~~~~~ 317 (337)
T 1pby_B 313 KKGQV 317 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 43333
No 266
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=75.29 E-value=0.61 Score=48.64 Aligned_cols=49 Identities=16% Similarity=0.399 Sum_probs=35.9
Q ss_pred ecCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCCCEEeeCCCCceEecCCCCCccCccCCCCC
Q psy951 157 CACPENATPKLPGVAEIRCSAAVERPRPLPRVCQCQNGGMCAESETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 157 C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
..|.+|| .|..|..... | ++.|..+|.|+.. .|.|.+||.|..|+....
T Consensus 520 ~~C~~gw-------~g~dc~i~~~-C-----p~~C~ghG~C~~G-----~C~Cd~G~~G~~C~~~~~ 568 (725)
T 2e26_A 520 FDKQQTW-------AIDNVYIGDG-C-----LDMCSGHGRCVQG-----SCVCDEQWGGLYCDEPET 568 (725)
T ss_dssp CCTTCCE-------EEEEEEEESC-S-----SGGGGGSEEEETT-----EEEECTTEESTTSCEESS
T ss_pred CccCCCc-------ccccccccCC-C-----CcccCCCcEECCC-----CEeeCCCccCCCcCccCC
Confidence 4688888 5677763221 1 2368899999863 699999999999987544
No 267
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=74.16 E-value=36 Score=29.52 Aligned_cols=80 Identities=16% Similarity=0.105 Sum_probs=51.6
Q ss_pred cceeEEeeccCCCEEEEEecCCC--eEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeC--CCCcEEEEEcc
Q psy951 324 RRIEALDIDPVDEIIYWVDSYDR--NIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDS--YDRNIRRSFML 399 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~~~--~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~--~~~~I~~~~~~ 399 (428)
..+..+++.|..++|+++..... +|+...+++ .....+...-..+..++++..++.|+++-. +...|...+++
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS---GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT---CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCC---CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC
Confidence 34778899999999987765544 677666655 333333334556788888888888888754 33345555545
Q ss_pred CcceeEE
Q psy951 400 EAQKGQV 406 (428)
Q Consensus 400 g~~~~~l 406 (428)
+...+.+
T Consensus 206 ~~~~~~~ 212 (297)
T 2ojh_A 206 GSSVERI 212 (297)
T ss_dssp SSCEEEC
T ss_pred CCCcEEE
Confidence 5544433
No 268
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=73.27 E-value=13 Score=35.53 Aligned_cols=91 Identities=12% Similarity=-0.012 Sum_probs=55.4
Q ss_pred Ccee---EEEcCCCCCEEEEEEC---C-----CCeEEEEEcCCCCeEEEEeCCCCccceeeeecc--ccEEEEEeC-CCC
Q psy951 32 HPTG---LSVDAAMDHTLYWVDS---K-----LNTIESVRHDGRNRQTILSGSDKLQHPISLDVF--ENNIYWLAR-DTG 97 (428)
Q Consensus 32 ~P~g---lavD~~~~~~lYW~d~---~-----~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~--~~~lYwtD~-~~~ 97 (428)
.|.| +++++..+ +||-+.. + .+.+..+++... +++..-. .-..|.+|.+. +.++|.+-. ..+
T Consensus 262 ~p~g~~~v~~s~dg~-~lyV~~~~~~~~~~~~~~~~~ViD~~t~--~vv~~i~-vg~~p~gi~~s~Dg~~l~va~~~~~~ 337 (368)
T 1mda_H 262 RSAGFQMVAKLKNTD-GIMILTVEHSRSCLAAAENTSSVTASVG--QTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTE 337 (368)
T ss_dssp EECSSSCEEEETTTT-EEEEEEEECSSCTTSCEEEEEEEESSSC--CEEECCE-EEEEECEEEECCSSSCEEEEEETTTT
T ss_pred ccCcceeeEEcCCCC-EEEEEeccccCcccccCCCEEEEECCCC--eEEEEEE-CCCCcceEEECCCCCEEEEEccCCCC
Confidence 5677 89998888 9998764 3 234556666544 3332211 11257777654 557999987 678
Q ss_pred ceeeeccCCCCceeeeccCCCCCccccccc
Q psy951 98 SLYKQDKFGRGVPVLISKDLVNPSGVKAYH 127 (428)
Q Consensus 98 ~I~~~~~~g~~~~~~~~~~~~~p~~I~v~~ 127 (428)
.|..++.........+. ....|.+|.+.+
T Consensus 338 ~VsVID~~t~kvv~~I~-vg~~P~~i~~~~ 366 (368)
T 1mda_H 338 VLDIYDAASDQDQSSVE-LDKGPESLSVQN 366 (368)
T ss_dssp EEEEEESSSCEEEEECC-CCSCCCEEECCC
T ss_pred eEEEEECCCCcEEEEEE-CCCCCCEEEeec
Confidence 89889987433332222 335677776543
No 269
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=66.84 E-value=7.6 Score=24.05 Aligned_cols=12 Identities=8% Similarity=0.193 Sum_probs=5.6
Q ss_pred HHHHhhheeecC
Q psy951 247 VSATVYYVWRKR 258 (428)
Q Consensus 247 ~~~~~~~~~r~~ 258 (428)
++.+.++++|||
T Consensus 27 i~~l~~~~~rrr 38 (38)
T 2k1k_A 27 LLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHeecC
Confidence 334445555543
No 270
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=66.73 E-value=25 Score=33.54 Aligned_cols=88 Identities=2% Similarity=-0.247 Sum_probs=57.9
Q ss_pred ceeeeecCccceeeccccccceeEEeeccCCCEEEEEecC---------CCeEEEeeeccccCCceEEEEec-------c
Q psy951 305 EIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY---------DRNIRRSFMLEAQKGQVQAVISD-------E 368 (428)
Q Consensus 305 ~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~---------~~~I~ra~l~g~~~~~~~~i~~~-------~ 368 (428)
.+..++....+....++--..| +++++|..+++|=++.. .+.|....+.- ......+--. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T--~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT--CCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC--CCEEEEEECCCccccccC
Confidence 3445666666655666555678 99999999999999842 23454444432 1111112111 2
Q ss_pred ccceeeeeeccCCeEEEEeCC-CCcEEE
Q psy951 369 RRIEALDIDPVDEIIYWVDSY-DRNIRR 395 (428)
Q Consensus 369 ~~p~glavD~~~~~lYwtd~~-~~~I~~ 395 (428)
..|.+++++..++.||.+..+ ...+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V 151 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGL 151 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEE
Confidence 579999999999999999875 456777
No 271
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=66.29 E-value=27 Score=35.54 Aligned_cols=100 Identities=13% Similarity=0.189 Sum_probs=63.0
Q ss_pred ceeeeecCc------cceeecc-ccccceeEEeeccCCCEEEEEecCC-------CeEEEeeeccccCC---ceEEEEec
Q psy951 305 EIRAYETHK------RRFRDVI-SDERRIEALDIDPVDEIIYWVDSYD-------RNIRRSFMLEAQKG---QVQAVISD 367 (428)
Q Consensus 305 ~~~~~~~~~------~~~~~~i-~~~~~~~~l~~d~~~~~lyWtd~~~-------~~I~ra~l~g~~~~---~~~~i~~~ 367 (428)
++..++... .....+. .+...+.++++.|..++|+|+.... ..|+...+++. + ....+..+
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~--g~~~~~~~l~~~ 239 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED--GRFADTRTLLGG 239 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT--SCEEEEEEEEEE
T ss_pred EEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC--CcccccEEeCCC
Confidence 455555555 4444455 5556677889999999999986533 47888888741 2 23334333
Q ss_pred -cccceeeeeeccCCeEEEEeCCCC--cEEEEEccCcceeEEE
Q psy951 368 -ERRIEALDIDPVDEIIYWVDSYDR--NIRRSFMLEAQKGQVQ 407 (428)
Q Consensus 368 -~~~p~glavD~~~~~lYwtd~~~~--~I~~~~~~g~~~~~l~ 407 (428)
...+..++....++ ||++-.... +|.+.+++++..+.|.
T Consensus 240 ~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 240 PEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp TTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESS
T ss_pred CCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecc
Confidence 45666777766677 777654333 6888777565555444
No 272
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=64.14 E-value=5.6 Score=29.90 Aligned_cols=71 Identities=20% Similarity=0.564 Sum_probs=45.4
Q ss_pred CCCCCCCCC--ccccCC-CcceecCCCCCCCCCCCCCCcccccCccCCCCCCCCCC-----CCCCCEEeeCCCCceEecC
Q psy951 138 PCSQSPCSH--LCLVIP-GGYQCACPENATPKLPGVAEIRCSAAVERPRPLPRVCQ-----CQNGGMCAESETGDLTCNC 209 (428)
Q Consensus 138 ~C~~~~C~~--~C~~~~-~~~~C~C~~g~~~~~~~~~g~~C~~~~~~~~~~~~~c~-----C~ngg~C~~~~~g~~~C~C 209 (428)
.|....|.. .|.... +..+|.|..+| .. .+..|....+ ..|. |.-...|....+....|.|
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllny-kk----~~~kCV~~~~------~~C~~NNGGCd~nA~C~~~~~~kIvC~C 74 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYF-KE----DAGKCVPAPN------MTCKDKNGGCAPEAECKMNDKNEIVCKC 74 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTE-EE----ETTEEEECTT------CCTTTGGGGSCTTSEEEECTTSCEEEEC
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCe-Ee----cCCEEEcCCC------CCccccCCCcCCCcceeecCCCcEEEEC
Confidence 344444544 677655 56799999999 33 1356765442 1222 3344589888766899999
Q ss_pred CCCCc-----cCccC
Q psy951 210 RQDFA-----GTFCE 219 (428)
Q Consensus 210 ~~gy~-----G~~Ce 219 (428)
...+. |.+|.
T Consensus 75 ~~~~~~~~~~gvf~~ 89 (95)
T 1b9w_A 75 TKEGSEPLFEGVFCS 89 (95)
T ss_dssp CSTTEEEEGGGTEEE
T ss_pred CCCCCCcceeeEEec
Confidence 99854 76664
No 273
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=63.97 E-value=3.7 Score=44.65 Aligned_cols=32 Identities=28% Similarity=0.546 Sum_probs=28.0
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.|||.|.... +...|.|++||.|..||...
T Consensus 504 PC~ngg~~~l~g-~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 504 PCPNNGRPTLSG-TECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp CBTTTBEEEEET-TEEEEECCTTBCSTTSCCBC
T ss_pred CCCCCCEeecCC-CceEEEccCCccccCccCcc
Confidence 699999999754 56899999999999999876
No 274
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=61.59 E-value=33 Score=35.71 Aligned_cols=75 Identities=15% Similarity=0.242 Sum_probs=50.1
Q ss_pred ceeEEEcCCCCCEEE-EEECC--CCeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEEEEEeCC------CCceeeec
Q psy951 33 PTGLSVDAAMDHTLY-WVDSK--LNTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNIYWLARD------TGSLYKQD 103 (428)
Q Consensus 33 P~glavD~~~~~~lY-W~d~~--~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~------~~~I~~~~ 103 (428)
+...+..+.++ .|+ |.-.. ...|...+++|...+.+..+.-....+.+.+ ++.||++... ...|++++
T Consensus 321 ~~~p~fspDG~-~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 321 PSEPHFTLDGN-SFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp CCCCEECTTSS-EEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CCCceEcCCCC-EEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEE
Confidence 44667777666 776 77433 4589999999988777766532333444444 8899998754 23688888
Q ss_pred cCCCCce
Q psy951 104 KFGRGVP 110 (428)
Q Consensus 104 ~~g~~~~ 110 (428)
.+|+...
T Consensus 398 ~~g~~~~ 404 (740)
T 4a5s_A 398 LIDYTKV 404 (740)
T ss_dssp TTEEEEE
T ss_pred CCCCCcc
Confidence 8765443
No 275
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=60.37 E-value=14 Score=37.56 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=61.8
Q ss_pred CeEEEEEcC--C-CCcEEEEeC----CCCCceeEEEcCCCCCEEEEEECC---------CCeEEEEEcCC------CCeE
Q psy951 10 PRIESAWMD--G-SHRRSLVMT----GVRHPTGLSVDAAMDHTLYWVDSK---------LNTIESVRHDG------RNRQ 67 (428)
Q Consensus 10 ~~I~~a~~D--G-~~~~~l~~~----~~~~P~glavD~~~~~~lYW~d~~---------~~~I~~~~ldG------~~~~ 67 (428)
.+|...+++ | ...+.+... .-..+.++++.+..+ +|+++... ...|...+++| ...+
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 468888888 5 444444331 233567889998888 89988643 25899999998 5555
Q ss_pred EEE-eCCCCccceeeeeccccEEEEEeCCC-------CceeeeccCC
Q psy951 68 TIL-SGSDKLQHPISLDVFENNIYWLARDT-------GSLYKQDKFG 106 (428)
Q Consensus 68 ~i~-~~~~~~~~p~~l~~~~~~lYwtD~~~-------~~I~~~~~~g 106 (428)
.+. ... ....-..++..+.+|+|+.+.. ..|+..+.++
T Consensus 181 ~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 181 ELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE 226 (662)
T ss_dssp ESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred EEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence 554 331 2222345666788999987543 3677777763
No 276
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=59.45 E-value=4.4 Score=37.05 Aligned_cols=25 Identities=32% Similarity=0.704 Sum_probs=21.9
Q ss_pred CCCCccccCCCcceecCCCCCCCCCC
Q psy951 143 PCSHLCLVIPGGYQCACPENATPKLP 168 (428)
Q Consensus 143 ~C~~~C~~~~~~~~C~C~~g~~~~~~ 168 (428)
.|.+.|.+..+++.|.|.+|| .+..
T Consensus 133 ~c~~~C~n~~g~~~C~C~~Gy-~l~~ 157 (278)
T 3dem_A 133 SCDHYCHNYIGGYYCSCRFGY-ILHT 157 (278)
T ss_dssp CCSSEEEEETTEEEEECCTTC-EECT
T ss_pred cCCcCcCCccCCcEEEeCCcc-eecc
Confidence 799999999999999999999 4443
No 277
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=59.43 E-value=41 Score=33.53 Aligned_cols=95 Identities=6% Similarity=-0.022 Sum_probs=59.2
Q ss_pred eeecCccceeeccccc-cceeEEeeccCCCEEEEEec--CCC--eEEEeee--ccccCCceEEEEeccccceeeeeeccC
Q psy951 308 AYETHKRRFRDVISDE-RRIEALDIDPVDEIIYWVDS--YDR--NIRRSFM--LEAQKGQVQAVISDERRIEALDIDPVD 380 (428)
Q Consensus 308 ~~~~~~~~~~~~i~~~-~~~~~l~~d~~~~~lyWtd~--~~~--~I~ra~l--~g~~~~~~~~i~~~~~~p~glavD~~~ 380 (428)
.+.........+.... ..+.++++.|. +.+|+++. +.. +|++..+ +| ... .+.........++.+.+
T Consensus 48 lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g---~~~--~l~~~~~~~~~~~s~dg 121 (582)
T 3o4h_A 48 AYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG---EEQ--RLEAVKPMRILSGVDTG 121 (582)
T ss_dssp EEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT---CCE--ECTTSCSBEEEEEEECS
T ss_pred EEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC---ccc--cccCCCCceeeeeCCCC
Confidence 3343333334444333 46788899887 89999987 333 7888888 66 222 22222233455666668
Q ss_pred CeEEEEeCCCCcEEEEEccCcceeEEEe
Q psy951 381 EIIYWVDSYDRNIRRSFMLEAQKGQVQA 408 (428)
Q Consensus 381 ~~lYwtd~~~~~I~~~~~~g~~~~~l~~ 408 (428)
+.++++-...+.+.+-++++...+.+..
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~ 149 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELAR 149 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeec
Confidence 8888776666666677888877666653
No 278
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=58.81 E-value=51 Score=30.43 Aligned_cols=97 Identities=7% Similarity=-0.024 Sum_probs=60.6
Q ss_pred CeEEEEEcCCCCcEEEEeCCCCCceeEEEcC-CCCCEEEEEECC-----CCeEEEEEcCCCCeEEEEeCCCC-ccceeee
Q psy951 10 PRIESAWMDGSHRRSLVMTGVRHPTGLSVDA-AMDHTLYWVDSK-----LNTIESVRHDGRNRQTILSGSDK-LQHPISL 82 (428)
Q Consensus 10 ~~I~~a~~DG~~~~~l~~~~~~~P~glavD~-~~~~~lYW~d~~-----~~~I~~~~ldG~~~~~i~~~~~~-~~~p~~l 82 (428)
..|...++++...+.+.. .-.....+++.+ ..+ +|.++... ...|..++++|...+.+...... .......
T Consensus 168 ~~l~~~d~~~g~~~~l~~-~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQ-ENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp EEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCceEEeec-CCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceE
Confidence 468888888666665554 334678889988 666 78777654 34899999999877766554210 1111234
Q ss_pred eccccEEEEEeCCC-C---ceeeeccCCCC
Q psy951 83 DVFENNIYWLARDT-G---SLYKQDKFGRG 108 (428)
Q Consensus 83 ~~~~~~lYwtD~~~-~---~I~~~~~~g~~ 108 (428)
+..+..|+++.... . .|+..+..++.
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 45566786654432 2 27777776544
No 279
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=57.90 E-value=5 Score=40.34 Aligned_cols=30 Identities=27% Similarity=0.785 Sum_probs=24.9
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCcc--CccC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAG--TFCE 219 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G--~~Ce 219 (428)
+|..+..|+....|.|.|.|+.||.| ..|.
T Consensus 28 ~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 28 ECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred CCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 67778899988778899999999995 4564
No 280
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=57.62 E-value=5.4 Score=38.45 Aligned_cols=35 Identities=31% Similarity=0.808 Sum_probs=24.7
Q ss_pred CCCCCCC-EEeeCCCCceEecCCCCCccCccCCCCC
Q psy951 189 CQCQNGG-MCAESETGDLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 189 c~C~ngg-~C~~~~~g~~~C~C~~gy~G~~Ce~~~~ 223 (428)
|.|...+ .|.....+.+.|.|.++|.|..|+.-..
T Consensus 255 C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 255 CKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLP 290 (375)
T ss_dssp ECCTTSCSCEEECTTSCEEECCCTTEESTTSCEECT
T ss_pred ecCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCC
Confidence 4564444 4555544568899999999999987544
No 281
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=56.79 E-value=46 Score=30.73 Aligned_cols=96 Identities=8% Similarity=-0.001 Sum_probs=58.2
Q ss_pred eecCccceeeccccccceeEEeecc-CCCEEEEEecC-----CCeEEEeeeccccCCceEEEEecc--ccceeeeeeccC
Q psy951 309 YETHKRRFRDVISDERRIEALDIDP-VDEIIYWVDSY-----DRNIRRSFMLEAQKGQVQAVISDE--RRIEALDIDPVD 380 (428)
Q Consensus 309 ~~~~~~~~~~~i~~~~~~~~l~~d~-~~~~lyWtd~~-----~~~I~ra~l~g~~~~~~~~i~~~~--~~p~glavD~~~ 380 (428)
++....+...+......+.++++.| ..+.|.++... ..+|+...++| ...+.+.... .....++....+
T Consensus 173 ~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~---~~~~~l~~~~~~~~~~~~~~spdg 249 (388)
T 3pe7_A 173 VDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG---TNMRKVKTHAEGESCTHEFWVPDG 249 (388)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS---CCCEESCCCCTTEEEEEEEECTTS
T ss_pred EECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC---CceEEeeeCCCCcccccceECCCC
Confidence 3443333334444445567889999 77778776543 33888888877 2333333321 234456777778
Q ss_pred CeEEEEe-C-CCCc--EEEEEccCcceeEEE
Q psy951 381 EIIYWVD-S-YDRN--IRRSFMLEAQKGQVQ 407 (428)
Q Consensus 381 ~~lYwtd-~-~~~~--I~~~~~~g~~~~~l~ 407 (428)
+.|+|+. . +... |.+.++++...+.+.
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 250 SALVYVSYLKGSPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp SCEEEEEEETTCCCEEEEEECTTTCCEEEEE
T ss_pred CEEEEEecCCCCCcceEEEEecCCCceEEEE
Confidence 8886643 3 3323 889998887766654
No 282
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=55.92 E-value=61 Score=29.32 Aligned_cols=76 Identities=9% Similarity=0.123 Sum_probs=49.9
Q ss_pred CeEEEEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECC----CCeEEEEEcCCCCeEEEEeCCCCccceeeeecc
Q psy951 10 PRIESAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSK----LNTIESVRHDGRNRQTILSGSDKLQHPISLDVF 85 (428)
Q Consensus 10 ~~I~~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~----~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~ 85 (428)
..|...+++|...+.+ .....+++.+.++ +|+++... ...|..+++++...+.+.... . ...+..+..
T Consensus 43 ~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~-~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspd 114 (347)
T 2gop_A 43 NTIVIENLKNNARRFI-----ENATMPRISPDGK-KIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNED 114 (347)
T ss_dssp EEEEEEETTTCCEEEE-----ESCEEEEECTTSS-EEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTT
T ss_pred ceEEEEeCCCCceEEc-----ccCCCeEECCCCC-EEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCC
Confidence 3677778887665554 3567788888888 88888643 336899999887666555542 2 222334445
Q ss_pred ccEEEEEe
Q psy951 86 ENNIYWLA 93 (428)
Q Consensus 86 ~~~lYwtD 93 (428)
+.+|+++.
T Consensus 115 g~~l~~~~ 122 (347)
T 2gop_A 115 SRKLLIVG 122 (347)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 66787775
No 283
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=54.34 E-value=74 Score=32.47 Aligned_cols=94 Identities=11% Similarity=0.131 Sum_probs=58.8
Q ss_pred CEEEeeCCCCeEEEEEcCCCCcEEEEe-CCCCCceeEEEc--CCCCCEEEEEEC-----------------CCCeEEEEE
Q psy951 1 MFWAETGASPRIESAWMDGSHRRSLVM-TGVRHPTGLSVD--AAMDHTLYWVDS-----------------KLNTIESVR 60 (428)
Q Consensus 1 lyWtd~~~~~~I~~a~~DG~~~~~l~~-~~~~~P~glavD--~~~~~~lYW~d~-----------------~~~~I~~~~ 60 (428)
||-+|..+. +|.+.+++--....++. .+...|+|+++. +.++ +||-+.. ..+.+..++
T Consensus 104 lfVnd~~~~-rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID 181 (595)
T 1fwx_A 104 LFMNDKANT-RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD 181 (595)
T ss_dssp EEEEETTTT-EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEE
T ss_pred EEEEcCCCC-EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCceEEEEE
Confidence 466665544 89999988655444443 345689999984 6677 8988852 334777777
Q ss_pred cCCCCeE-EEEeCCCCccceeeeeccccEEEEEeCCCCc
Q psy951 61 HDGRNRQ-TILSGSDKLQHPISLDVFENNIYWLARDTGS 98 (428)
Q Consensus 61 ldG~~~~-~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~ 98 (428)
.+..... .|.-+ +.+.-..++..++++|.|..+...
T Consensus 182 ~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~ 218 (595)
T 1fwx_A 182 ADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEK 218 (595)
T ss_dssp TTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTC
T ss_pred CCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCccc
Confidence 7754321 12222 222234455578999999876543
No 284
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.85 E-value=58 Score=29.93 Aligned_cols=74 Identities=8% Similarity=-0.007 Sum_probs=45.9
Q ss_pred ceeEEEcCCCCCEEEEEECC--CCeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEEEEEeCCCCceeeeccCCCC
Q psy951 33 PTGLSVDAAMDHTLYWVDSK--LNTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNIYWLARDTGSLYKQDKFGRG 108 (428)
Q Consensus 33 P~glavD~~~~~~lYW~d~~--~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~lYwtD~~~~~I~~~~~~g~~ 108 (428)
+..+++.+..+ +|+++-.. ...|...++++...+.+.............+..+.+|+++... +.|+..+..++.
T Consensus 38 ~~~~~~SpdG~-~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGK-KLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSC-EEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCC
T ss_pred eecCcCCCCCC-EEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCC
Confidence 56778887777 88777543 4478888998876555544321111113345567788887644 357777776543
No 285
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=51.13 E-value=84 Score=32.17 Aligned_cols=88 Identities=16% Similarity=0.274 Sum_probs=55.2
Q ss_pred ceeeeecCCcceeeeecCcc---ceeeccccccceeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccc--
Q psy951 295 GLTIVYSNGPEIRAYETHKR---RFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDER-- 369 (428)
Q Consensus 295 ~~~~~~s~~~~~~~~~~~~~---~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~-- 369 (428)
|..+++.....+..++.... ....+......+..+++.|..++|.++.. ..|+...+++ +....+...-.
T Consensus 120 g~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~---g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 120 AQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLAS---GRQMQLTADGSTT 194 (741)
T ss_dssp SSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTT---TEEEECCCCCCSS
T ss_pred CCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCC---CCEEEeccCCccc
Confidence 33455533356666666655 44445555567889999999998888753 3677777765 32322222111
Q ss_pred ---------------cceeeeeeccCCeEEEEe
Q psy951 370 ---------------RIEALDIDPVDEIIYWVD 387 (428)
Q Consensus 370 ---------------~p~glavD~~~~~lYwtd 387 (428)
.+.+++....++.|+++.
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 256788888889898874
No 286
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=50.75 E-value=5.9 Score=40.17 Aligned_cols=54 Identities=26% Similarity=0.525 Sum_probs=28.7
Q ss_pred ceecCCCCCCCCCCCCCCcccccCc---cCCCCCCCCC-CCCCCCEEeeCCCCceEecCCCCCcc
Q psy951 155 YQCACPENATPKLPGVAEIRCSAAV---ERPRPLPRVC-QCQNGGMCAESETGDLTCNCRQDFAG 215 (428)
Q Consensus 155 ~~C~C~~g~~~~~~~~~g~~C~~~~---~~~~~~~~~c-~C~ngg~C~~~~~g~~~C~C~~gy~G 215 (428)
-.|.|.+|| .. .+..|+.-. .........| +|..+ +.....|.+.|.|..||..
T Consensus 263 G~C~C~~G~-e~----~~~~C~aC~~g~~k~~~~~~~C~~CP~~--S~s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 263 GQCLCQAGY-EK----VEDACQACSPGFFKFEASESPCLECPEH--TLPSPEGATSCECEEGFFR 320 (536)
T ss_dssp CCCEECTTE-EE----ETTEEEECCTTEECCSCCSSCCEECCSS--EECCCTTCSSCEECTTCBC
T ss_pred CcEeccCcc-cc----CCceeeecCCCCCcccCCCCccccCCCC--CCCCCCCccEEEEeccccc
Confidence 478999998 21 234555311 1111112233 34332 1233357899999999974
No 287
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=49.92 E-value=4.5 Score=37.24 Aligned_cols=25 Identities=36% Similarity=0.858 Sum_probs=21.8
Q ss_pred CCCCccccCCCcceecCCCCCCCCCC
Q psy951 143 PCSHLCLVIPGGYQCACPENATPKLP 168 (428)
Q Consensus 143 ~C~~~C~~~~~~~~C~C~~g~~~~~~ 168 (428)
.|++.|.+..+++.|.|.+|| .+..
T Consensus 132 ~c~~~C~n~~g~~~csC~~Gy-~L~~ 156 (286)
T 1nt0_A 132 PCDHYCHXYLGGYYCSCRVGY-ILHQ 156 (286)
T ss_dssp CCSSEEEEETTEEEEECCTTE-EECT
T ss_pred cCCCccccccCceEeecCCCc-eecc
Confidence 599999999999999999999 5543
No 288
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=48.18 E-value=18 Score=22.44 Aligned_cols=6 Identities=17% Similarity=1.104 Sum_probs=2.4
Q ss_pred hheeec
Q psy951 252 YYVWRK 257 (428)
Q Consensus 252 ~~~~r~ 257 (428)
++++||
T Consensus 34 ~~~~rR 39 (41)
T 2k9y_A 34 FFIHRR 39 (41)
T ss_dssp HSSSSS
T ss_pred eeEeee
Confidence 344443
No 289
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=47.99 E-value=1.2e+02 Score=27.32 Aligned_cols=80 Identities=9% Similarity=0.031 Sum_probs=53.1
Q ss_pred cceeEEeeccCCCEEEEEecC----CCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCC----------
Q psy951 324 RRIEALDIDPVDEIIYWVDSY----DRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSY---------- 389 (428)
Q Consensus 324 ~~~~~l~~d~~~~~lyWtd~~----~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~---------- 389 (428)
..+..+.+.|..++|+++... ...|+...+++ ++...+...-. +.+++....++.|+++...
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~---g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET---LSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT---TEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC---CceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 456778999999999888543 23688888876 33333433222 6777777778889887421
Q ss_pred ----------------CCcEEEEEccCcce-eEEE
Q psy951 390 ----------------DRNIRRSFMLEAQK-GQVQ 407 (428)
Q Consensus 390 ----------------~~~I~~~~~~g~~~-~~l~ 407 (428)
...|.+.++++... +.|.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~ 169 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE 169 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeec
Confidence 34688888877665 4443
No 290
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=47.22 E-value=1.2e+02 Score=30.84 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=54.4
Q ss_pred eEEEEEcCCCCcEEEEeCCCCCcee-EEEcCCCCCEEEEEECCCC----eEEEEEcCCCCeEEEEeCCCCccceeeeecc
Q psy951 11 RIESAWMDGSHRRSLVMTGVRHPTG-LSVDAAMDHTLYWVDSKLN----TIESVRHDGRNRQTILSGSDKLQHPISLDVF 85 (428)
Q Consensus 11 ~I~~a~~DG~~~~~l~~~~~~~P~g-lavD~~~~~~lYW~d~~~~----~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~ 85 (428)
+|...+.+|...+.+ ...-....+ +++++.++ +||.+....+ .|..+++++...+.+... ...+.+.++..
T Consensus 336 ~l~~~~~~~~~~~~l-~~~~~~v~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~--~~~~~~~~spd 411 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQV-TKGEWEVTNFAGFDPKGT-RLYFESTEASPLERHFYCIDIKGGKTKDLTPE--SGMHRTQLSPD 411 (706)
T ss_dssp EEEEEETTSCEEEEC-CCSSSCEEEEEEECTTSS-EEEEEESSSCTTCBEEEEEETTCCCCEESCCS--SSEEEEEECTT
T ss_pred EEEEEECCCCEEEec-CCCCeEEEeeeEEcCCCC-EEEEEecCCCCceEEEEEEEcCCCCceeccCC--CceEEEEECCC
Confidence 566666666544443 222222234 78898888 8999877654 899999987665544332 22333445555
Q ss_pred ccEEEEEeCC---CCceeeeccCCCC
Q psy951 86 ENNIYWLARD---TGSLYKQDKFGRG 108 (428)
Q Consensus 86 ~~~lYwtD~~---~~~I~~~~~~g~~ 108 (428)
+.+|..+-.. -..|+..+..++.
T Consensus 412 g~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 412 GSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCEEEEEecCCCCCcEEEEEECCCCe
Confidence 6666665322 1346666665443
No 291
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=47.12 E-value=6.7 Score=36.16 Aligned_cols=53 Identities=23% Similarity=0.558 Sum_probs=31.5
Q ss_pred eecCCCCCCCCCCCCCCcccccCcc---------CCCCCCCCCCCCCCCEEeeCCCCceEecCCCC------CccCccCC
Q psy951 156 QCACPENATPKLPGVAEIRCSAAVE---------RPRPLPRVCQCQNGGMCAESETGDLTCNCRQD------FAGTFCEN 220 (428)
Q Consensus 156 ~C~C~~g~~~~~~~~~g~~C~~~~~---------~~~~~~~~c~C~ngg~C~~~~~g~~~C~C~~g------y~G~~Ce~ 220 (428)
.|.|.+|| .|..|+-... .|......=.|...|.|+-. +|.|..+ |.|.+||.
T Consensus 208 ~C~C~~g~-------~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG-----~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 208 ICRCDTGY-------IGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG-----QCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp EEEECTTE-------ESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT-----EEEECCCSSTTCEEESTTSCE
T ss_pred ceeCCCCC-------cCCcceecCCccccccccccCCCCCCCCccCCCceEeCC-----eeECcCCCCCCeeEeeEeccc
Confidence 68899999 5676652211 22211011137777888642 5889766 46888875
No 292
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=45.37 E-value=6.8 Score=23.77 Aligned_cols=6 Identities=17% Similarity=0.523 Sum_probs=2.4
Q ss_pred heeecC
Q psy951 253 YVWRKR 258 (428)
Q Consensus 253 ~~~r~~ 258 (428)
++.|||
T Consensus 29 ~~iRRr 34 (35)
T 1iij_A 29 ILIKRR 34 (35)
T ss_dssp HHHHHC
T ss_pred eEEeec
Confidence 344443
No 293
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=43.28 E-value=48 Score=33.05 Aligned_cols=92 Identities=10% Similarity=0.021 Sum_probs=58.8
Q ss_pred cceeeeecCccceeeccccccceeEEeeccCCCEEEEEecCC-CeEEEeeeccccCCceEEEEe-ccccceeee------
Q psy951 304 PEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYD-RNIRRSFMLEAQKGQVQAVIS-DERRIEALD------ 375 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~~-~~I~ra~l~g~~~~~~~~i~~-~~~~p~gla------ 375 (428)
.++..++........+.........+++.|..+.|+-++... .+|++..+++ ++.. ++. .-..+.+++
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~---~~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD---GSVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT---CCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred eEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC---CcEE-EccCCCcChhhhhhccccc
Confidence 445556665555555556666778999999999999555433 2899888877 3344 443 233445555
Q ss_pred --eeccCCeEEEEeCCCCcEEEEEccCc
Q psy951 376 --IDPVDEIIYWVDSYDRNIRRSFMLEA 401 (428)
Q Consensus 376 --vD~~~~~lYwtd~~~~~I~~~~~~g~ 401 (428)
++..+ .+|++-.....+.+-.+ |+
T Consensus 251 ~~~spdg-~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 251 LGYLPDG-RLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp EEECTTS-CEEEEEEETTEEEEEET-TE
T ss_pred eeEcCCC-cEEEEEEcCCcEEEEEE-CC
Confidence 77666 77776655556666666 54
No 294
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=40.54 E-value=1.5e+02 Score=30.44 Aligned_cols=87 Identities=11% Similarity=0.084 Sum_probs=57.7
Q ss_pred eeccccccceeEEeeccCCCEEEEEecCCC--eEEEeeeccccCCceEEEE-eccccceeeeeeccCCeEEEEeCCC---
Q psy951 317 RDVISDERRIEALDIDPVDEIIYWVDSYDR--NIRRSFMLEAQKGQVQAVI-SDERRIEALDIDPVDEIIYWVDSYD--- 390 (428)
Q Consensus 317 ~~~i~~~~~~~~l~~d~~~~~lyWtd~~~~--~I~ra~l~g~~~~~~~~i~-~~~~~p~glavD~~~~~lYwtd~~~--- 390 (428)
..+++...... ++.+..++|+++..... +|+...++| .....+. .......+++.+..++.|+++-++.
T Consensus 321 ~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g---~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP 395 (693)
T 3iuj_A 321 RDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG---KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQP 395 (693)
T ss_dssp EEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS---CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSC
T ss_pred EEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC---CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCC
Confidence 34555444444 78888899988865443 788888877 3233332 2455566777777888898876542
Q ss_pred CcEEEEEccCcceeEEEe
Q psy951 391 RNIRRSFMLEAQKGQVQA 408 (428)
Q Consensus 391 ~~I~~~~~~g~~~~~l~~ 408 (428)
..|...++++...+.|..
T Consensus 396 ~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 396 PTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp CEEEEECTTTCCEEEEEC
T ss_pred CEEEEEECCCCeEEEEEe
Confidence 578888887777666653
No 295
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.13 E-value=1.2e+02 Score=27.74 Aligned_cols=95 Identities=9% Similarity=-0.037 Sum_probs=56.8
Q ss_pred CeEEEEEcCCCCcEEEEeCCCCCceeEEEcC-CCCCEEEEEECCC-----CeEEEEEcCCCCeEEEEeCCCCccce--ee
Q psy951 10 PRIESAWMDGSHRRSLVMTGVRHPTGLSVDA-AMDHTLYWVDSKL-----NTIESVRHDGRNRQTILSGSDKLQHP--IS 81 (428)
Q Consensus 10 ~~I~~a~~DG~~~~~l~~~~~~~P~glavD~-~~~~~lYW~d~~~-----~~I~~~~ldG~~~~~i~~~~~~~~~p--~~ 81 (428)
..|...++++...+.+.. .......+++.+ ..+ +|+++.... ..|..++++|...+.+.... ....+ ..
T Consensus 168 ~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-~~~~~~~~~ 244 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA-EGESCTHEF 244 (396)
T ss_dssp EEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC-TTEEEEEEE
T ss_pred ceEEEEECCCCcEEeecc-CCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCceeEeeccC-CCccccceE
Confidence 468888888766555543 344667788877 455 688875432 47999999887765554421 11122 34
Q ss_pred eeccccEEEEEeCC--CCc--eeeeccCCC
Q psy951 82 LDVFENNIYWLARD--TGS--LYKQDKFGR 107 (428)
Q Consensus 82 l~~~~~~lYwtD~~--~~~--I~~~~~~g~ 107 (428)
++..+.+|+++... ... |+..+..++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 44556677777533 223 666666543
No 296
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=38.84 E-value=12 Score=28.62 Aligned_cols=32 Identities=19% Similarity=0.483 Sum_probs=24.1
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCcc--CccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAG--TFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G--~~Ce~~ 221 (428)
.|.....|.....|...|.|.+||.| ..|...
T Consensus 11 ~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~ 44 (99)
T 1ob1_C 11 QCPQNSGCFRHLDEREECKCLLNYKQEGDKCVEN 44 (99)
T ss_dssp CCCTTEEEECCTTSCCEEEECTTEEEETTEEEEC
T ss_pred CCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeC
Confidence 35556788887778999999999995 446554
No 297
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=38.44 E-value=1.1e+02 Score=31.27 Aligned_cols=78 Identities=10% Similarity=0.110 Sum_probs=54.8
Q ss_pred eeEEeeccCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeCCCCcEEEEEccCcceeE
Q psy951 326 IEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQ 405 (428)
Q Consensus 326 ~~~l~~d~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~ 405 (428)
+.++++.|..++|+.+.. .+|+...+++........+...-..+..+++...++.|+++..+ .|.+.++++...+.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~--~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR--NLWVIDLASGRQMQ 186 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT--EEEEEETTTTEEEE
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC--cEEEEecCCCCEEE
Confidence 678999999999888875 67887777762000233333334567888998899999888643 79999988866555
Q ss_pred EE
Q psy951 406 VQ 407 (428)
Q Consensus 406 l~ 407 (428)
+.
T Consensus 187 ~~ 188 (741)
T 2ecf_A 187 LT 188 (741)
T ss_dssp CC
T ss_pred ec
Confidence 44
No 298
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=38.30 E-value=2.3e+02 Score=28.66 Aligned_cols=79 Identities=9% Similarity=0.068 Sum_probs=46.2
Q ss_pred eeEEeeccCCCEEEEEec--------------------------------CCCeEEEeeeccccCCceEEEEe---cccc
Q psy951 326 IEALDIDPVDEIIYWVDS--------------------------------YDRNIRRSFMLEAQKGQVQAVIS---DERR 370 (428)
Q Consensus 326 ~~~l~~d~~~~~lyWtd~--------------------------------~~~~I~ra~l~g~~~~~~~~i~~---~~~~ 370 (428)
+.++.+.|..++|+.+.. ...+|+...+++ +....+.. .-..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~---~~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT---GKTVYLQTGEPKEKF 259 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT---TEEEECCCCSCTTCE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC---CceEeeccCCCCcee
Confidence 578999999888887742 112455555544 22222211 1123
Q ss_pred ceeeeeeccCCeEEEEeCCC----CcEEEEEccCc-ceeEEE
Q psy951 371 IEALDIDPVDEIIYWVDSYD----RNIRRSFMLEA-QKGQVQ 407 (428)
Q Consensus 371 p~glavD~~~~~lYwtd~~~----~~I~~~~~~g~-~~~~l~ 407 (428)
+..++....++.|+++.... ..|.+.++++. ..+++.
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 45677777788888854332 36777887776 455554
No 299
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=36.99 E-value=88 Score=31.86 Aligned_cols=64 Identities=8% Similarity=0.112 Sum_probs=46.5
Q ss_pred ccccceeEEeeccCCCEEEE-EecCC-----------CeEEEeeeccccCCceEEEEe--ccccceeeeeeccCCeEEEE
Q psy951 321 SDERRIEALDIDPVDEIIYW-VDSYD-----------RNIRRSFMLEAQKGQVQAVIS--DERRIEALDIDPVDEIIYWV 386 (428)
Q Consensus 321 ~~~~~~~~l~~d~~~~~lyW-td~~~-----------~~I~ra~l~g~~~~~~~~i~~--~~~~p~glavD~~~~~lYwt 386 (428)
..+..|=+|+||+. +.||- ||... ..+++..-+. ++...++. ...+|+|+++....+.||.+
T Consensus 473 ~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t---Gel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 473 NMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPAT---GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTT---CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCC---CeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 35788999999986 66766 88642 2677765432 44555554 56789999999999999996
Q ss_pred eC
Q psy951 387 DS 388 (428)
Q Consensus 387 d~ 388 (428)
-.
T Consensus 549 vQ 550 (592)
T 4a9v_A 549 IQ 550 (592)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 300
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=36.69 E-value=7.3 Score=38.86 Aligned_cols=29 Identities=28% Similarity=0.675 Sum_probs=0.0
Q ss_pred CEEeeCCCCce---EecCCCCCccCccCCCCCC
Q psy951 195 GMCAESETGDL---TCNCRQDFAGTFCENYTGI 224 (428)
Q Consensus 195 g~C~~~~~g~~---~C~C~~gy~G~~Ce~~~~~ 224 (428)
..|.+.. |.+ .|.|.+||.|..||=....
T Consensus 467 ~~C~~g~-G~~~CG~C~C~~G~~G~~CeC~~~~ 498 (503)
T 3v4v_B 467 PHCSDGQ-GHLQCGVCSCAPGRLGRLCESRGLE 498 (503)
T ss_dssp ---------------------------------
T ss_pred cccCCCC-eeEeCCceECcCCCcCCCCCCCCcc
Confidence 3564222 455 4699999999999875543
No 301
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=36.14 E-value=82 Score=32.63 Aligned_cols=77 Identities=9% Similarity=0.111 Sum_probs=49.7
Q ss_pred eeEEeeccCCCEEE-EEec--CCCeEEEeeeccccCCceEEEEeccccce-eeeeeccCCeEEEEeCC------CCcEEE
Q psy951 326 IEALDIDPVDEIIY-WVDS--YDRNIRRSFMLEAQKGQVQAVISDERRIE-ALDIDPVDEIIYWVDSY------DRNIRR 395 (428)
Q Consensus 326 ~~~l~~d~~~~~ly-Wtd~--~~~~I~ra~l~g~~~~~~~~i~~~~~~p~-glavD~~~~~lYwtd~~------~~~I~~ 395 (428)
+...++.|..+.|+ |... +...|+...++| +....+..+-.... -++.| ++.||++... ...|.+
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~---~~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK---KDCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTTSCEEEEEEETTC---SSCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEE
T ss_pred CCCceEcCCCCEEEEEEEcCCCceEEEEEECCC---CceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEE
Confidence 34567888888776 7643 234899988887 33444444322222 24467 8999998754 457999
Q ss_pred EEccCcceeEEE
Q psy951 396 SFMLEAQKGQVQ 407 (428)
Q Consensus 396 ~~~~g~~~~~l~ 407 (428)
++++|+..++.+
T Consensus 396 v~~~g~~~~~~l 407 (740)
T 4a5s_A 396 IQLIDYTKVTCL 407 (740)
T ss_dssp EETTEEEEEEES
T ss_pred EECCCCCcceee
Confidence 999998765444
No 302
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=35.67 E-value=2.1e+02 Score=29.34 Aligned_cols=74 Identities=7% Similarity=0.089 Sum_probs=46.7
Q ss_pred eccCCCEEEEEe-cC--CCeEEEeeeccccCCceEEEEeccccceeeeeeccCCeEEEEeC--CCCcEEEEEccCcceeE
Q psy951 331 IDPVDEIIYWVD-SY--DRNIRRSFMLEAQKGQVQAVISDERRIEALDIDPVDEIIYWVDS--YDRNIRRSFMLEAQKGQ 405 (428)
Q Consensus 331 ~d~~~~~lyWtd-~~--~~~I~ra~l~g~~~~~~~~i~~~~~~p~glavD~~~~~lYwtd~--~~~~I~~~~~~g~~~~~ 405 (428)
+++..+.||.+- .. ..+|++..+++....+.+.++..-.... .+.+.++.|+++.. +...|.+.+++|+..+.
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 556667776663 32 2489999998742223466664222222 55555888988654 55578999999876665
Q ss_pred E
Q psy951 406 V 406 (428)
Q Consensus 406 l 406 (428)
+
T Consensus 365 l 365 (693)
T 3iuj_A 365 V 365 (693)
T ss_dssp E
T ss_pred e
Confidence 5
No 303
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=34.29 E-value=4.3 Score=23.51 Aligned_cols=9 Identities=22% Similarity=0.870 Sum_probs=5.7
Q ss_pred EecCCCCCc
Q psy951 206 TCNCRQDFA 214 (428)
Q Consensus 206 ~C~C~~gy~ 214 (428)
.|+||.|-.
T Consensus 19 scscptgcn 27 (36)
T 1rju_V 19 SCSCPTGCN 27 (36)
T ss_dssp SCCSCTTCC
T ss_pred cCCCCCCCC
Confidence 477777654
No 304
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=33.13 E-value=3.6e+02 Score=29.02 Aligned_cols=93 Identities=9% Similarity=-0.040 Sum_probs=58.7
Q ss_pred eEE-EEEcCCCCcEEEEeCCCCCceeEEEcCCCCCEEEEEECCCCeEEEEEcCCCCeEEEEeCCCCccceeeeeccccEE
Q psy951 11 RIE-SAWMDGSHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDSKLNTIESVRHDGRNRQTILSGSDKLQHPISLDVFENNI 89 (428)
Q Consensus 11 ~I~-~a~~DG~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~~~~~l 89 (428)
+|. ..++++...+.+. .....+..+++.+..+ +|+.+.. .+.|...++.+...+.+..+.......+..+..+.+|
T Consensus 359 ~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~-~la~~~~-~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGK-FAVVAND-RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSS-EEEEEET-TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred ceEEEEECCCCCceEec-CCccceeeeEECCCCC-EEEEECC-CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeE
Confidence 566 6677766555443 3345778999998887 8887764 5689999998776666664421222334555566677
Q ss_pred EEEeCCC---------CceeeeccCC
Q psy951 90 YWLARDT---------GSLYKQDKFG 106 (428)
Q Consensus 90 YwtD~~~---------~~I~~~~~~g 106 (428)
.|+.... ..|+..+..+
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEecCccccccCCCCCeEEEEECCC
Confidence 7765422 3566566554
No 305
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=32.82 E-value=1.7e+02 Score=29.59 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=53.5
Q ss_pred eEEEEEcCCCCcEEEEe-CCCCC----ceeEEEcCCCCCEEEEE-ECCCC------eEEEEE-cCCCC---eEEEEeCCC
Q psy951 11 RIESAWMDGSHRRSLVM-TGVRH----PTGLSVDAAMDHTLYWV-DSKLN------TIESVR-HDGRN---RQTILSGSD 74 (428)
Q Consensus 11 ~I~~a~~DG~~~~~l~~-~~~~~----P~glavD~~~~~~lYW~-d~~~~------~I~~~~-ldG~~---~~~i~~~~~ 74 (428)
.|...++++.....++. ..-.+ +..++..+.++ +|+++ ....+ .|...+ .++.. .+.+..+..
T Consensus 281 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 281 ILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR-KFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDW 359 (723)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC-SEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSS
T ss_pred EEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC-eEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCe
Confidence 45555665444333332 11112 24788888777 78886 44444 688888 56655 444433321
Q ss_pred CccceeeeeccccEEEEEeCC----CCceeeeccCCC
Q psy951 75 KLQHPISLDVFENNIYWLARD----TGSLYKQDKFGR 107 (428)
Q Consensus 75 ~~~~p~~l~~~~~~lYwtD~~----~~~I~~~~~~g~ 107 (428)
......+.+..++.||++... ...|++.+..|+
T Consensus 360 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 360 DVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp CEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred EEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 122224566678899887644 245777776654
No 306
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=31.78 E-value=15 Score=33.45 Aligned_cols=24 Identities=25% Similarity=0.710 Sum_probs=18.1
Q ss_pred EEeeCCCCceEecCCCCCc----cCccCC
Q psy951 196 MCAESETGDLTCNCRQDFA----GTFCEN 220 (428)
Q Consensus 196 ~C~~~~~g~~~C~C~~gy~----G~~Ce~ 220 (428)
.|.+.. ++|.|.|+.||. +..|+.
T Consensus 16 ~C~~~~-~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 16 FCLPGQ-ESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp BCCCCT-TSCCCBCCTTEEECTTSSCEEE
T ss_pred EeeCCC-CCeEecCCCCcccCCCCCcccc
Confidence 576665 679999999997 456764
No 307
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=30.58 E-value=26 Score=26.92 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=23.8
Q ss_pred CCCCCEEeeCCCCceEecCCCCCcc--CccCCC
Q psy951 191 CQNGGMCAESETGDLTCNCRQDFAG--TFCENY 221 (428)
Q Consensus 191 C~ngg~C~~~~~g~~~C~C~~gy~G--~~Ce~~ 221 (428)
|.....|.....|...|.|..||.| ..|...
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~ 50 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA 50 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEECSSSEEEC
T ss_pred CCCCCCeEECCCCCEeEEEECCeeccCCEEEEC
Confidence 5556789887778999999999995 446544
No 308
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=30.53 E-value=3.2e+02 Score=28.02 Aligned_cols=98 Identities=12% Similarity=0.165 Sum_probs=54.0
Q ss_pred ceeeeecCcc--c-eeeccccccceeEEeeccCCCEEEEEec-C--CCeEEEeeeccccCCceEEEEe-ccccceeeeee
Q psy951 305 EIRAYETHKR--R-FRDVISDERRIEALDIDPVDEIIYWVDS-Y--DRNIRRSFMLEAQKGQVQAVIS-DERRIEALDID 377 (428)
Q Consensus 305 ~~~~~~~~~~--~-~~~~i~~~~~~~~l~~d~~~~~lyWtd~-~--~~~I~ra~l~g~~~~~~~~i~~-~~~~p~glavD 377 (428)
++..++.... . ...+.......... +++..+.||+... . ..+|++..+++.. .+.+.++. .-....+++++
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA 372 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE
Confidence 4444444433 2 33343333333333 3467777777633 2 3479999987621 24555654 22233455554
Q ss_pred ccCCeEEEEeC--CCCcEEEEEccCcceeEE
Q psy951 378 PVDEIIYWVDS--YDRNIRRSFMLEAQKGQV 406 (428)
Q Consensus 378 ~~~~~lYwtd~--~~~~I~~~~~~g~~~~~l 406 (428)
++.|+++-. +..+|.+.+++|+..+.|
T Consensus 373 --~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 373 --GNRLFASYIHDAKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp --BTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred --CCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence 888888764 455677778777754443
No 309
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=29.59 E-value=19 Score=36.51 Aligned_cols=33 Identities=21% Similarity=0.583 Sum_probs=24.6
Q ss_pred CCCCCCEEeeCCCCceEecCCCC--CccCccCCCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQD--FAGTFCENYTGI 224 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~g--y~G~~Ce~~~~~ 224 (428)
||+||+.- ..+..-.|.|+++ -.|+.|+.....
T Consensus 359 PC~nn~~~--l~g~~C~C~C~~~~~t~~~~C~~~~~~ 393 (540)
T 3nsj_A 359 PCRSGQHK--SSHDSCQCECQDSKVTNQDCCPRQRGL 393 (540)
T ss_dssp CCBTTEEE--CSSCTTCEEESCTTTBCGGGCBSSTTE
T ss_pred cccCCCcc--CCCCceEeeCCCCCCcccccccccCcc
Confidence 68898743 3445678999998 568999987643
No 310
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=29.30 E-value=28 Score=33.71 Aligned_cols=35 Identities=23% Similarity=0.766 Sum_probs=22.9
Q ss_pred CCCCCCCC-EEeeCC-CC--ceEecCCCCCccCccCCCC
Q psy951 188 VCQCQNGG-MCAESE-TG--DLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 188 ~c~C~ngg-~C~~~~-~g--~~~C~C~~gy~G~~Ce~~~ 222 (428)
.|.|..++ .|.... .+ .-.|.|.+++.|..||.-.
T Consensus 265 ~C~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CErC~ 303 (403)
T 2y38_A 265 RCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCC 303 (403)
T ss_dssp ECCCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCEEC
T ss_pred ccccCCCccccCCCCCCCccceEeECcCcCcCCCCCCCC
Confidence 45675554 486432 11 2469999999999998644
No 311
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=28.70 E-value=2.9e+02 Score=29.73 Aligned_cols=107 Identities=9% Similarity=0.016 Sum_probs=66.0
Q ss_pred eeeecCCcceeeeecCccceeeccccccceeEEeeccCCCEEEEEecC-----CCeEEEeeeccccCCceEEEEeccccc
Q psy951 297 TIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY-----DRNIRRSFMLEAQKGQVQAVISDERRI 371 (428)
Q Consensus 297 ~~~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWtd~~-----~~~I~ra~l~g~~~~~~~~i~~~~~~p 371 (428)
.+.|....++..++........+......+..+++.|..++|.|+... ...|+...+++ +....+...-...
T Consensus 26 ~iaf~~~~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~---g~~~~lt~~~~~~ 102 (1045)
T 1k32_A 26 RIIFVCCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN---GEIKRITYFSGKS 102 (1045)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT---TEEEECCCCCEEE
T ss_pred EEEEEECCcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC---CCeEEcccCCCcc
Confidence 344433345555666655555555666678899999999999998543 33788877776 3333332222222
Q ss_pred -------eeeeeeccCCeEEEEeC------CCCcEEEEEccCcceeEEE
Q psy951 372 -------EALDIDPVDEIIYWVDS------YDRNIRRSFMLEAQKGQVQ 407 (428)
Q Consensus 372 -------~glavD~~~~~lYwtd~------~~~~I~~~~~~g~~~~~l~ 407 (428)
.+++....++ |+++-. +...|...+++|...+.|.
T Consensus 103 ~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~ 150 (1045)
T 1k32_A 103 TGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLN 150 (1045)
T ss_dssp ETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECC
T ss_pred cccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEec
Confidence 5677777777 555444 3356888888887655543
No 312
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=33.06 E-value=13 Score=22.93 Aligned_cols=11 Identities=27% Similarity=0.924 Sum_probs=4.5
Q ss_pred HHhhheeecCC
Q psy951 249 ATVYYVWRKRP 259 (428)
Q Consensus 249 ~~~~~~~r~~~ 259 (428)
++.+..|+|+.
T Consensus 26 IiLi~~w~qKP 36 (39)
T 2l6w_A 26 IILIMLWQKKP 36 (39)
Confidence 33344444443
No 313
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=26.97 E-value=32 Score=34.79 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=25.3
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.|++...... +.-.|.|+.||.|..|+...
T Consensus 453 pC~~~~~~~~~g-t~C~c~C~~g~~G~~c~~~~ 484 (537)
T 3ojy_B 453 PCQGNGVPVLKG-SRCDCICPVGSQGLACEVSY 484 (537)
T ss_dssp CCSTTCEEEEET-TEEEEECCTTEETGGGCEES
T ss_pred CCCcCCEEecCC-CceeccCCCCcccccccCCc
Confidence 688988876654 45778999999999998743
No 314
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=25.98 E-value=4.4e+02 Score=26.69 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=45.9
Q ss_pred ccccceeEEeeccCCCEEEEEecCC---------------------CeEEEeeeccccCC----ceEEEE-e--------
Q psy951 321 SDERRIEALDIDPVDEIIYWVDSYD---------------------RNIRRSFMLEAQKG----QVQAVI-S-------- 366 (428)
Q Consensus 321 ~~~~~~~~l~~d~~~~~lyWtd~~~---------------------~~I~ra~l~g~~~~----~~~~i~-~-------- 366 (428)
..+..++++.+||.++.||.+-... ..|+|...++.+.. .+++++ .
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 4577899999999999999984421 25888877652111 223322 1
Q ss_pred -------------ccccceeeeeeccCCeEEEEeCC
Q psy951 367 -------------DERRIEALDIDPVDEIIYWVDSY 389 (428)
Q Consensus 367 -------------~~~~p~glavD~~~~~lYwtd~~ 389 (428)
.+..|.+|++|..++.+-=+|.+
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~ 496 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGD 496 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCC
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCC
Confidence 26789999999876533336754
No 315
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=25.78 E-value=33 Score=22.86 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=23.9
Q ss_pred cCCCEEEEEecCCCeEEEeeeccccCCceEEEEeccc
Q psy951 333 PVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAVISDER 369 (428)
Q Consensus 333 ~~~~~lyWtd~~~~~I~ra~l~g~~~~~~~~i~~~~~ 369 (428)
-..+.||-||..+.-=+||.++| +++-+.++.
T Consensus 13 gvqgflfhtdgkesygyrafing-----veigikdie 44 (72)
T 4f87_A 13 GVQGFLFHTDGKESYGYRAFING-----VEIGIKDIE 44 (72)
T ss_dssp SCCEEEEECCSSSCCCEEEEETT-----EEEEECCHH
T ss_pred cceEEEEecCCccccchhheecc-----eEecceehH
Confidence 35688999998888889999998 455554433
No 316
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=25.58 E-value=27 Score=33.91 Aligned_cols=20 Identities=20% Similarity=0.752 Sum_probs=17.1
Q ss_pred ceEecCCCCCccCccCCCCC
Q psy951 204 DLTCNCRQDFAGTFCENYTG 223 (428)
Q Consensus 204 ~~~C~C~~gy~G~~Ce~~~~ 223 (428)
.|.|.|-.||.|..|+....
T Consensus 396 ~F~C~Cy~gw~G~~C~~~~~ 415 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCERKSM 415 (424)
T ss_dssp HEEEEECTTBCTTTTCSBCT
T ss_pred CcEeeccCCCCcccccCCCC
Confidence 37899999999999997653
No 317
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=25.26 E-value=17 Score=22.87 Aligned_cols=9 Identities=22% Similarity=0.870 Sum_probs=5.3
Q ss_pred EecCCCCCc
Q psy951 206 TCNCRQDFA 214 (428)
Q Consensus 206 ~C~C~~gy~ 214 (428)
.|+||.|-.
T Consensus 23 scscptgcn 31 (53)
T 1aqs_A 23 SCSCPTGCN 31 (53)
T ss_dssp SCSCCTTCS
T ss_pred cCCCCCCCC
Confidence 466666654
No 318
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=25.12 E-value=5.6 Score=35.26 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=23.5
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENYT 222 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~~ 222 (428)
+|.++.+|.... ..++|.|+-++++.+|+.+.
T Consensus 172 ~~~~~~~~~~~~-~~~~c~~~~~~~~~~c~~~~ 203 (218)
T 4deq_A 172 PCSERRKHLFVQ-DPQTCKCSCKNTDSRCKARQ 203 (218)
T ss_dssp CCCSSSTTSEEE-CTTTCCEEESSCHHHHHTTT
T ss_pred ccccCCcccccC-CCcceEccCCcccccccccc
Confidence 577777774433 24679999999999997654
No 319
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=25.03 E-value=54 Score=19.46 Aligned_cols=10 Identities=50% Similarity=0.614 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q psy951 235 LYIPTLLLLL 244 (428)
Q Consensus 235 ~~~~i~~~~~ 244 (428)
++++++++++
T Consensus 7 lg~Gvl~LLv 16 (35)
T 2lk9_A 7 LGIGILVLLI 16 (35)
T ss_dssp HHHHHHHHHH
T ss_pred ecccHHHHHH
Confidence 3445544443
No 320
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=24.03 E-value=5.7e+02 Score=25.82 Aligned_cols=76 Identities=3% Similarity=-0.003 Sum_probs=45.3
Q ss_pred eeccCCCEEEEEecCC---CeEEEeeeccccCCceEEEEeccc--cceeeeeeccCCeEEEEeC--CCCcEEEEEc-cCc
Q psy951 330 DIDPVDEIIYWVDSYD---RNIRRSFMLEAQKGQVQAVISDER--RIEALDIDPVDEIIYWVDS--YDRNIRRSFM-LEA 401 (428)
Q Consensus 330 ~~d~~~~~lyWtd~~~---~~I~ra~l~g~~~~~~~~i~~~~~--~p~glavD~~~~~lYwtd~--~~~~I~~~~~-~g~ 401 (428)
.+++..+.||+..... .+|++..+++......+.++.... ...++++. ..+.|+++-. +..+|.+.++ +|+
T Consensus 292 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCC
Confidence 4677788888774332 389999887631113466664322 44555543 2677887654 4446777787 666
Q ss_pred ceeEE
Q psy951 402 QKGQV 406 (428)
Q Consensus 402 ~~~~l 406 (428)
..++|
T Consensus 371 ~~~~l 375 (710)
T 2xdw_A 371 LLKIF 375 (710)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 44443
No 321
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=23.78 E-value=19 Score=37.53 Aligned_cols=28 Identities=25% Similarity=0.756 Sum_probs=23.3
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCccCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTFCENY 221 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~Ce~~ 221 (428)
.|..+|.|++.. +|.|-+||.|..|+..
T Consensus 191 ~C~g~G~C~~~~----~C~C~~g~~g~~C~~~ 218 (725)
T 2e26_A 191 MCYGHGSCINGT----KCICDPGYSGPTCKIS 218 (725)
T ss_dssp GGGGSEEEETTT----EEEECTTEESTTSCEE
T ss_pred ccCCCcEecCCC----eeeccCCcccCccccC
Confidence 588889997543 6999999999999863
No 322
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=23.42 E-value=15 Score=35.22 Aligned_cols=29 Identities=28% Similarity=0.717 Sum_probs=22.6
Q ss_pred CCCCCCEEeeCCCCceEecCCCCCccCc--cCCCCC
Q psy951 190 QCQNGGMCAESETGDLTCNCRQDFAGTF--CENYTG 223 (428)
Q Consensus 190 ~C~ngg~C~~~~~g~~~C~C~~gy~G~~--Ce~~~~ 223 (428)
.|..+|.|.. | +|.|.+||.|.. |.....
T Consensus 197 ~CsGhG~C~~---g--~C~Cd~G~~g~d~~C~~~~~ 227 (387)
T 2ddu_A 197 YCSGHGDCIS---G--VCFCDLGYTAAQGTCVSNTP 227 (387)
T ss_dssp GGGGSEEEET---T--EEEECTTEEEETTEEEESSC
T ss_pred ccCCCceecC---C--eEEecCCcccCCCccccccc
Confidence 5888899965 2 699999999974 876543
No 323
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=22.29 E-value=36 Score=20.30 Aligned_cols=14 Identities=21% Similarity=0.650 Sum_probs=7.4
Q ss_pred HHHHHhhheeecCC
Q psy951 246 LVSATVYYVWRKRP 259 (428)
Q Consensus 246 ~~~~~~~~~~r~~~ 259 (428)
+++-..|++||-|+
T Consensus 21 ~~lg~tflywrgrr 34 (40)
T 2l9u_A 21 MMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHhCceeEEEcccc
Confidence 34445566666544
No 324
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=21.42 E-value=3.1e+02 Score=28.11 Aligned_cols=96 Identities=9% Similarity=0.037 Sum_probs=51.5
Q ss_pred CCeEEEEEcCC--CCcEEEEeCCCCCceeEEEcCCCCCEEEEEEC--CCCeEEEEEcCCCCeEEEEeCCCCccceeeeec
Q psy951 9 SPRIESAWMDG--SHRRSLVMTGVRHPTGLSVDAAMDHTLYWVDS--KLNTIESVRHDGRNRQTILSGSDKLQHPISLDV 84 (428)
Q Consensus 9 ~~~I~~a~~DG--~~~~~l~~~~~~~P~glavD~~~~~~lYW~d~--~~~~I~~~~ldG~~~~~i~~~~~~~~~p~~l~~ 84 (428)
..+|.+.++++ ...+.++...-....+++++ .+ .|+++-. +..+|...+++|...+.+.-.......-++.+.
T Consensus 340 ~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~-~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~ 416 (741)
T 1yr2_A 340 LKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GN-RLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRP 416 (741)
T ss_dssp TCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BT-EEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCB
T ss_pred CCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CC-EEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCC
Confidence 45799998887 34555554322233455555 56 7887754 345788888888755443211001112223333
Q ss_pred cccEEEEEeC---CCCceeeeccCCC
Q psy951 85 FENNIYWLAR---DTGSLYKQDKFGR 107 (428)
Q Consensus 85 ~~~~lYwtD~---~~~~I~~~~~~g~ 107 (428)
.++.|+++-. .-++|+..+..++
T Consensus 417 d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 417 GDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp TCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred CCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 4455665422 2246777776643
No 325
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=20.91 E-value=6.3e+02 Score=25.19 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=62.0
Q ss_pred ceeeeecCccceeecccccc----ceeEEeeccCCCEEEEEecC--------CCeEEEeeeccccCCceEEEEec---cc
Q psy951 305 EIRAYETHKRRFRDVISDER----RIEALDIDPVDEIIYWVDSY--------DRNIRRSFMLEAQKGQVQAVISD---ER 369 (428)
Q Consensus 305 ~~~~~~~~~~~~~~~i~~~~----~~~~l~~d~~~~~lyWtd~~--------~~~I~ra~l~g~~~~~~~~i~~~---~~ 369 (428)
.++..+........++.... .+..+++.|..++|..+... ..+|+.-.+++ +..+.+... -.
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~l~~~~~~~~ 114 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH---GDPQSLDPPEVSNA 114 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS---CCCEECCCTTCCSC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC---CceEeccCCccccc
Confidence 45555555444444443322 37889999999988777432 14566666665 223223221 11
Q ss_pred cceeeeeeccCCeEEEEeCCCCcEEEEEccCcceeEEEec
Q psy951 370 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAG 409 (428)
Q Consensus 370 ~p~glavD~~~~~lYwtd~~~~~I~~~~~~g~~~~~l~~~ 409 (428)
.+..+++...++.|.++.. ..|.+.++++...+.+...
T Consensus 115 ~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~ 152 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVST 152 (723)
T ss_dssp CCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECC
T ss_pred cccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecC
Confidence 2667888888989988776 4799999888776666543
No 326
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=20.56 E-value=4.7e+02 Score=26.43 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=51.5
Q ss_pred ceeeeecCccceeeccccccceeEEeeccCCCEEEEE-ecC--CCeEEEeeeccccCCceEEEEe-c-cccceeeeeecc
Q psy951 305 EIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWV-DSY--DRNIRRSFMLEAQKGQVQAVIS-D-ERRIEALDIDPV 379 (428)
Q Consensus 305 ~~~~~~~~~~~~~~~i~~~~~~~~l~~d~~~~~lyWt-d~~--~~~I~ra~l~g~~~~~~~~i~~-~-~~~p~glavD~~ 379 (428)
++..++........+............ +..+ +|.. +.. ..+|++..+++....+.+.++. . -....++++.
T Consensus 253 ~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-- 328 (695)
T 2bkl_A 253 DVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-- 328 (695)
T ss_dssp EEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--
T ss_pred EEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--
Confidence 344343333333334433333333333 4444 5554 433 3589999987631112355654 2 3345666666
Q ss_pred CCeEEEEeC--CCCcEEEEEccCcceeEE
Q psy951 380 DEIIYWVDS--YDRNIRRSFMLEAQKGQV 406 (428)
Q Consensus 380 ~~~lYwtd~--~~~~I~~~~~~g~~~~~l 406 (428)
++.|+++-. +..+|.+.+++|+..+++
T Consensus 329 ~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 329 GGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred CCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 788888665 455677777777654443
No 327
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=20.19 E-value=27 Score=34.51 Aligned_cols=14 Identities=36% Similarity=1.075 Sum_probs=7.2
Q ss_pred EecCCCCCccCccC
Q psy951 206 TCNCRQDFAGTFCE 219 (428)
Q Consensus 206 ~C~C~~gy~G~~Ce 219 (428)
.|.|.+||.|..||
T Consensus 459 ~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 459 VCRCGPGWLGSQCE 472 (472)
T ss_dssp EEEECTTC------
T ss_pred ceECcCCCCCCCCC
Confidence 57999999999997
Done!