BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9513
(1491 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328713323|ref|XP_001948559.2| PREDICTED: DNA repair protein RAD50-like [Acyrthosiphon pisum]
Length = 1303
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 389/1352 (28%), Positives = 695/1352 (51%), Gaps = 97/1352 (7%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L+ + I GIR++ D+ + ++F +PLTLI+G+NGCGKTTIIEC+K+ ++ P+ A+
Sbjct: 1 MSTLESISIQGIRSYHPDEKQTLKFYKPLTLILGQNGCGKTTIIECLKYITCSDLPRNAN 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FV DP++ VKL + V V ++L
Sbjct: 61 KG---------------------GFVWDPKLSDHHTVKGNVKLSFHDTKDTRVVVSKTLE 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+ K + + D TISRK G + C + V MC +GVSK+IL +V+FCHQ
Sbjct: 100 STQKLATVSTKSLDQTISRK----GQSTSHKCADLDDV--MCTYLGVSKSILKDVVFCHQ 153
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
E+S+WPLDE KKVKE FD IFD KY+K ++ I+I+ + + + Q Y++E
Sbjct: 154 EDSNWPLDEDKKVKEKFDSIFDVGKYDKCIKQIQIEIKATQADKRTCNNNIQHFWKYREE 213
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTER 300
A +K+ + N D+ ++L++I++ + P+ E+ ++ +KE + + + T +
Sbjct: 214 ARNKRATLENKKFSFDELQQKLNSIDKEIIPLEERYKEIMKKEEHFFSLKNKLLTSEGNL 273
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQS 360
+ I+ + +L+ IK F G+ ++L +L F NL +K + LK+ I E +
Sbjct: 274 NSIRLAIKDLKLLIKLEFKGNDSDLDEELKNFNNNLVQKEKDKYKLNCLKNDAITNENKI 333
Query: 361 HTHINEAQMKLGKLERDEETHKKLNDTLK--TKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
++++ Q+ LG+ + +E+ + LN+ K K+ L + + + ++Y + +
Sbjct: 334 QENMSKEQVNLGRYQSEEKQN--LNNINKQNAKIIELGNEMQFNLPDLTEYNRVQVISNL 391
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDL 478
+ ++++ L + R EN Q+ I+++ VEK +L+ +IK ++QI N ++
Sbjct: 392 SNNLSSMNDKLESTQKEHREI---ENKLQSNIDSIRVEKAKLDQEIKIKEKQILENTSEI 448
Query: 479 TNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDE 538
+ I++V S L LQ + ++++ L SL+ D +K +I ++ E +
Sbjct: 449 QKLKKDIDQVRNSAEKLSALQKSKVDIETKLNILRGSLNVDDVKKDINKKKDEKYEQNIK 508
Query: 539 LCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKN 598
L VI+ E+ LQ +I AE+ ++ K + +LK + + L IP+E K
Sbjct: 509 LEVIEKEVQKLQLLSIVQAELDTVILNKTGIDNKLKILKNKVNDVLKDLLGFIPQEKLKF 568
Query: 599 SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLG 658
L ++ I ++ I K+K L TLEAN +++ + LR ++ L+ + + +
Sbjct: 569 EFTSFLDKLSDTIRCNRKSIAEKQKQLTTLEANYNHTKEKLRTKQIELSNDENALSDMCQ 628
Query: 659 SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVP 718
+ +E L V +++ Q + ++++ +LF YI LE +P CPLC R F S V
Sbjct: 629 GQEYETILKEVNEKVEELQAQKGSVSTSGHLFRRYIKNLEAQDPSCPLCHRCFGSIDEVT 688
Query: 719 GLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLI 778
L+N L ++ +IP + ++ L K+Q LQ+L+P Y I L+ T+IP+L+ +L
Sbjct: 689 ELINDLNMRVHKIPSELETTIAQLETLLKKQSKLQQLRPTYTRISVLKQTEIPNLKDELE 748
Query: 779 ELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESK 838
+ N+ + + EL KL +T E A ++Q D+ ++D ++ +E +R +K
Sbjct: 749 RISSNLRKCRDELTKLSDENGKLETNETNAKNIQSDIIMIDSFDNDVKRYSKEEQRLTTK 808
Query: 839 ISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQ 898
++ S +L + ++++ K+ +N + +E Q LN + E L +LQ Q+N I S +
Sbjct: 809 MTESGSIR-NLQEAISERNALKSTINEICNVLEKKQYELNEYTEMLHNLQTQQNKITSDE 867
Query: 899 LTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHK 958
L ++ KS+ D+ +L+ +++ EL+ + PI+ +L+ + + KK+
Sbjct: 868 LNIKSKMQDEKSVIDKLNDLQNLEATISLELDSARETLGPIQEKLDTCINTFEQTKKQQS 927
Query: 959 KKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKR 1018
+K+ +I K+++E+ ++ I NY K+ ++ + LN+ K + I ++
Sbjct: 928 RKIENNRKEIIILEKKIQEINNLQSSIDNYEKKEWTLRIKETNNLLNNLNKEKMNYIEEQ 987
Query: 1019 GVCERTINEINQSIANQSLEEIDLKNNLTLLEK-KEAVAKLNEELKLSE----IMISDL- 1072
++ I+ IN+ ANQ +++IDL+NN L +K KE + L+E K E + ++ L
Sbjct: 988 KNLQKQIDSINEYNANQEVKKIDLENNKKLRQKSKEEIECLSEINKFHEDFGTMDVNSLL 1047
Query: 1073 ------TKYHHTL--ENCVIKYHSQKMRSINRLIREYWTRIY-------------QLKLS 1111
TK L E Q++ +I R I E T I+ QL++
Sbjct: 1048 SEKSTNTKQRQALAEEKNKSLGRKQELDNIIRHITEELTAIHFKNAENIYLHEKVQLEIL 1107
Query: 1112 EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD-----V 1166
+ DLTKY+ LE + ++H ++M+SIN +I++ W IY GNDIDYI I +
Sbjct: 1108 NRVEKDLTKYNKALEWAMNRFHKERMQSINTIIKKLWRDIYTGNDIDYIQIKTSSDDKPI 1167
Query: 1167 GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDE 1226
T + K+R +NYRVVQ KN +E DMR RCSAGQ+VLACLI+R+ +++ + ++ DE
Sbjct: 1168 QTDTIKKRVFNYRVVQIKNEVELDMRGRCSAGQKVLACLIVRMALAETFSKNCGILALDE 1227
Query: 1227 EFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVI 1286
T +D + + ++LAE+ S I S QK+FQL++I
Sbjct: 1228 P----TTNLDESNI-------QSLAESLSE--------------IITRRSSQKSFQLLII 1262
Query: 1287 THDEEFIENLTA---IDRAYVVRIVRDHKGLS 1315
THD F+ L+A +D Y V+ R ++G+S
Sbjct: 1263 THDPNFLRKLSARDMVDTYYEVK--RSNEGMS 1292
>gi|238637251|ref|NP_001154855.1| RAD50 homolog [Xenopus laevis]
gi|224555762|gb|ACN56470.1| Rad50 [Xenopus laevis]
Length = 1312
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 364/1324 (27%), Positives = 676/1324 (51%), Gaps = 139/1324 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DKN+ V++F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIQGVRSFGIEDKNKQVIQFFTPLTVLVGPNGAGKTTIIECLKYITTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S GK FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------SKGKTFVHDPKVAHETDVRAQIRLQLKDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K T + I+R V + C + + EM + +GVS A+LNNVIFC
Sbjct: 100 MICTQKGKSTEFKTLEGVITRIKHGEKVSLSTKCAEMDK--EMISALGVSAAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EG+++K FDEIF AT+Y KALE++K R + + E YQ +
Sbjct: 158 HQEDSNWPLSEGRQLKVKFDEIFSATRYIKALETLKKVRTQQAHNVRE----YQVEIKNL 213
Query: 239 KEADSKKQLIYNNTQKRDQ----SFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K + I +N Q +++ S E + +IE ++P+ ++L + +RN+S VM
Sbjct: 214 KQNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPLKDRLADI---QRNLSKVMRLDN 270
Query: 294 QTKKTE---RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLK 350
+ K E R M Q++ +LE ++++F G EL + ++ EK +L +Q+R
Sbjct: 271 EIKALESRKRTMEQDN-QDLEEKMEKVFQGTDEELNGMYQNHQRSVREKERKLNDQQREM 329
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ +E ++ + E ++ G+L+ + + H++ T + + +LA L LD ++ +
Sbjct: 330 DRACKESQRLNREKGELLVQQGRLQLEADHHQQYIKTRDSLIKSLAAQLELDGFERTPFN 389
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
+ + + +K + + R FS+ E KQ +++ + +K LE I+ K
Sbjct: 390 QRQTSNFQMLVKERQEKDEAHANQILREFSEREAMKQRQLDEMRDKKTGLERTIE-LKSS 448
Query: 471 IEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
+ K DL NV ++ ++ S LQ L +L + E++ + KS + + L+ E+
Sbjct: 449 TQSKKHTDLKNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVLQLQ 508
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFD 589
Q++EL+ + +D E+ + +T ++ LK K K I +K RH+ LL
Sbjct: 509 NQKSELDRNVRKLDQEMEQMNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDELSLLLG 568
Query: 590 MIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAEL 649
P K L+ L S DIN+ ++ + K L E N ++ S LR ++ A
Sbjct: 569 YFPN---KKQLEDWLYSKRKDINQTRDKLARLTKELVAAEQNKNHLSNELRRKEEQSASF 625
Query: 650 MDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCT 708
+++ V GS+ F+ +L R+ ++++ ++ +M+ ++ +I L EEN+P CP+C
Sbjct: 626 EEKVFDVCGSQDFDSDLSRLQDDIEKTSKQRAMLAGATAVYTQFITTLTEENQPCCPVCQ 685
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT 768
R F S+ + ++N +++K++ +P++ + + + + K++ + ELKP+ + + L++
Sbjct: 686 RIFPSEAELQDVINDMQSKLRLVPDKLKSAEGELKRKEKRKDDMMELKPMRQMLADLKEK 745
Query: 769 DIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTL 828
+IP +R+KL+ + + K ++ + +T + T ++E++A + D++L+++ EL +
Sbjct: 746 EIPEIRNKLVTINREIQRLKNDVDEQETLIATFASEEESAKACLQDISLMERYQMELRDV 805
Query: 829 QRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
+R++ + +K+ G+ + QV +++EK++ L+ KIE + R+ E++Q L+
Sbjct: 806 ERKIAQYATKLQGV-DLNCTVQQVSQEKQEKQHNLDNVSGKIELLRKRIQDQQEQVQQLK 864
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
N++ +++L + + LE++ EL E++E ++ P+E+ L Q
Sbjct: 865 SAVNELTAEKLHISSNLQRRQQLEEQNVELTTELQCLAREIKEAREQLFPLESTLQKLQQ 924
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
E L + + E K+ D ++++++ + +I Y++ G ++
Sbjct: 925 EKQELLQRKESSYREAQEKVNDIKEKVKKINLLTKDIEKYSQDGK-----------EEFK 973
Query: 1009 QRKE----DIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
++KE ++I + CE+ ++N Q I Q ++E L++NLTL ++ E + +
Sbjct: 974 EQKESELQELIGRLNECEKLKEKVNREMVTIRQDIDTQKIQERCLQDNLTLRKRIEELKR 1033
Query: 1058 LNEE----LK-LSEIMISDLTKYHHTLENCVIKYHSQKMRSINR-------LIR------ 1099
+ EE LK + ++ + + + LEN + ++ R ++R
Sbjct: 1034 VEEERHQLLKEMGQMKVVQMKNEYQELENKSESLKTNHSLALGRQKGFEDEILRFKKELE 1093
Query: 1100 ---------EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+Y ++ ++ +E+ I DL Y+ TL+ ++KYHS KM IN+++R+ W
Sbjct: 1094 GSQYKEAEEKYREKMIVMRTTELAIKDLDIYYKTLDQAIMKYHSIKMEEINKIVRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+ DI+YI I +D T ++KRRTYNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 TYRSQDIEYIEIQSDADESVTAADKRRTYNYRVVMIKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISD---------------------------------------QKNFQLIVITHDEEF 1228
RL +++ Q+NFQLIVITHDE+F
Sbjct: 1214 RLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLIVITHDEDF 1273
Query: 1229 IENL 1232
+E L
Sbjct: 1274 VELL 1277
>gi|28317081|gb|AAO39559.1| LP09268p, partial [Drosophila melanogaster]
Length = 1322
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 392/1366 (28%), Positives = 677/1366 (49%), Gaps = 146/1366 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 5 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 64
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 65 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 104
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 105 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 161
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 162 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANI 221
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +LV++ RN+
Sbjct: 222 KHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RNVEFEIG 277
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFK---INLDEKCSELE 344
+YQ +K E D ++C + L IK+ F G EL +++ F + + +K +E+E
Sbjct: 278 KYQAQKVEMDTKHKNCKDQISTLTLKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVE 337
Query: 345 N------------QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
QE+L +Q + H +E + L+R +E ++L+
Sbjct: 338 GDLSQIKRSSVAEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELH------- 390
Query: 393 NNLADTLCLDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEIN 451
+ +D Q PE+ GE L + I K+ +I+E+ + ++Q +I+
Sbjct: 391 ------IPIDCDLVEQ--PEKMGEVLRDIEAMIITKHCEITEIVEQN-EKADRSRQVKID 441
Query: 452 ALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ 511
L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN +
Sbjct: 442 ELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINEVNELYES 501
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKL 570
+K++D +K+ I E + + +D +++ L + +AE SLK ++ + K
Sbjct: 502 ATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKN 560
Query: 571 ADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+++ ++ RH F LF N++ S+ + +I + E N ++ + E
Sbjct: 561 QEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEI 620
Query: 631 NVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQ 687
N + D R EL D EL+ S P++D L+R + + Q + + S++
Sbjct: 621 KRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSE 677
Query: 688 YLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 678 ALYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQI 735
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+ +L +LKP + +L+D+ +P + +L ++EE + ++ E + L + P +
Sbjct: 736 KYENLLQLKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMEL 794
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR 867
A S+ GD++LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R
Sbjct: 795 ANSMMGDMSLLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSKELETER 854
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
++ES Q + + L L+++KN + +Q+ ++ G L L++R +L + +
Sbjct: 855 KELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVAS 914
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
E+ EL K+ P++ L A E + LKK +KL + +K Y +++R+ E +
Sbjct: 915 EISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDHDIQRLNKEAED 974
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
Y K ++ L E + + + A+ + + I +NQ E DLK+N
Sbjct: 975 YAKLDLRNEIKKLDEIIMASKDKLRKLEAEISLKTDELETIKTECSNQQTVERDLKDNRE 1034
Query: 1048 LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI-------------------KYHS 1088
L + ++ AKL E ++ + + +L + + E + + HS
Sbjct: 1035 LKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVNLTKQRDKATVRKGELLGQLGEIHS 1094
Query: 1089 QKMRSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
Q +N+L RE + Y+++++ + I DL +Y LE +I++HS+K
Sbjct: 1095 Q----VNKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEK 1150
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
M INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR
Sbjct: 1151 MEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRG 1210
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 1211 RCSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEA 1259
Query: 1254 FSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 1260 L--NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 1291
>gi|281364022|ref|NP_726199.3| rad50, isoform D [Drosophila melanogaster]
gi|384872701|sp|Q9W252.4|RAD50_DROME RecName: Full=DNA repair protein RAD50
gi|272432636|gb|AAF46847.3| rad50, isoform D [Drosophila melanogaster]
Length = 1318
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 392/1366 (28%), Positives = 677/1366 (49%), Gaps = 146/1366 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANI 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +LV++ RN+
Sbjct: 218 KHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RNVEFEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFK---INLDEKCSELE 344
+YQ +K E D ++C + L IK+ F G EL +++ F + + +K +E+E
Sbjct: 274 KYQAQKVEMDTKHKNCKDQISTLTLKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVE 333
Query: 345 N------------QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
QE+L +Q + H +E + L+R +E ++L+
Sbjct: 334 GDLSQIKRSSVAEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELH------- 386
Query: 393 NNLADTLCLDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEIN 451
+ +D Q PE+ GE L + I K+ +I+E+ + ++Q +I+
Sbjct: 387 ------IPIDCDLVEQ--PEKMGEVLRDIEAMIITKHCEITEIVEQN-EKADRSRQVKID 437
Query: 452 ALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ 511
L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN +
Sbjct: 438 ELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINEVNELYES 497
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKL 570
+K++D +K+ I E + + +D +++ L + +AE SLK ++ + K
Sbjct: 498 ATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKN 556
Query: 571 ADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+++ ++ RH F LF N++ S+ + +I + E N ++ + E
Sbjct: 557 QEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEI 616
Query: 631 NVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQ 687
N + D R EL D EL+ S P++D L+R + + Q + + S++
Sbjct: 617 KRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSE 673
Query: 688 YLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 674 ALYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQI 731
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+ +L +LKP + +L+D+ +P + +L ++EE + ++ E + L + P +
Sbjct: 732 KYENLLQLKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMEL 790
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR 867
A S+ GD++LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R
Sbjct: 791 ANSMMGDMSLLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSKELETER 850
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
++ES Q + + L L+++KN + +Q+ ++ G L L++R +L + +
Sbjct: 851 KELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVAS 910
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
E+ EL K+ P++ L A E + LKK +KL + +K Y +++R+ E +
Sbjct: 911 EISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDHDIQRLNKEAED 970
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
Y K ++ L E + + + A+ + + I +NQ E DLK+N
Sbjct: 971 YAKLDLRNEIKKLDEIIMASKDKLRKLEAEISLKTDELETIKTECSNQQTVERDLKDNRE 1030
Query: 1048 LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI-------------------KYHS 1088
L + ++ AKL E ++ + + +L + + E + + HS
Sbjct: 1031 LKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVNLTKQRDKATVRKGELLGQLGEIHS 1090
Query: 1089 QKMRSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
Q +N+L RE + Y+++++ + I DL +Y LE +I++HS+K
Sbjct: 1091 Q----VNKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEK 1146
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
M INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR
Sbjct: 1147 MEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRG 1206
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 1207 RCSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEA 1255
Query: 1254 FSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 1256 L--NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 1287
>gi|386768435|ref|NP_001246461.1| rad50, isoform E [Drosophila melanogaster]
gi|383302640|gb|AFH08214.1| rad50, isoform E [Drosophila melanogaster]
Length = 1318
Score = 451 bits (1161), Expect = e-123, Method: Compositional matrix adjust.
Identities = 391/1366 (28%), Positives = 676/1366 (49%), Gaps = 146/1366 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANI 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +LV++ RN+
Sbjct: 218 KHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RNVEFEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFK---INLDEKCSELE 344
+YQ +K E D ++C + L IK+ F G EL +++ F + + +K +E+E
Sbjct: 274 KYQAQKVEMDTKHKNCKDQISTLTLKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVE 333
Query: 345 N------------QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
QE+L +Q + H +E + L+R +E ++L+
Sbjct: 334 GDLSQIKRSSVAEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELH------- 386
Query: 393 NNLADTLCLDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEIN 451
+ +D Q PE+ GE L + I K+ +I+E+ + ++Q +I+
Sbjct: 387 ------IPIDCDLVEQ--PEKMGEVLRDIEAMIITKHCEITEIVEQN-EKADRSRQVKID 437
Query: 452 ALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ 511
L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN +
Sbjct: 438 ELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINEVNELYES 497
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKL 570
+K++D +K+ I E + + +D +++ L + +AE SLK ++ + K
Sbjct: 498 ATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKN 556
Query: 571 ADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+++ ++ RH F LF N++ S+ + +I + E N ++ + E
Sbjct: 557 QEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEI 616
Query: 631 NVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQ 687
N + D R EL D EL+ S P++D L+R + + Q + + S++
Sbjct: 617 KRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSE 673
Query: 688 YLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 674 ALYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQI 731
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+ +L +LKP + +L+D+ +P + +L ++EE + ++ E + L + P +
Sbjct: 732 KYENLLQLKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMEL 790
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR 867
A S+ GD++LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R
Sbjct: 791 ANSMMGDMSLLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSKELETER 850
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
++ES Q + + L L+++KN + +Q+ ++ G L L++R +L + +
Sbjct: 851 KELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVAS 910
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
E+ EL K+ P++ L A E + LKK +KL + +K Y +++R+ E +
Sbjct: 911 EISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDHDIQRLNKEAED 970
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
Y K ++ L E + + + + + + I +NQ E DLK+N
Sbjct: 971 YAKLDLRNEIKKLDEIIMASKDKLRKLATEISLKTDELETIKTECSNQQTVERDLKDNRE 1030
Query: 1048 LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI-------------------KYHS 1088
L + ++ AKL E ++ + + +L + + E + + HS
Sbjct: 1031 LKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVNLTKQRDKATVRKGELLGQLGEIHS 1090
Query: 1089 QKMRSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
Q +N+L RE + Y+++++ + I DL +Y LE +I++HS+K
Sbjct: 1091 Q----VNKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEK 1146
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
M INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR
Sbjct: 1147 MEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRG 1206
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 1207 RCSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEA 1255
Query: 1254 FSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 1256 L--NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 1287
>gi|307184041|gb|EFN70591.1| DNA repair protein RAD50 [Camponotus floridanus]
Length = 1368
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 374/1358 (27%), Positives = 683/1358 (50%), Gaps = 130/1358 (9%)
Query: 1 MALLDQLHIMGIRNFPAD-KNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L + GIRNF D ++ ++RF PLTLI+G NG GKTTIIE +K+A T E+P G+
Sbjct: 1 MSKIRKLSLRGIRNFGDDNEDSLIRFSCPLTLILGPNGTGKTTIIEALKYATTGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK F F+HDP + +VK + +T V R++
Sbjct: 61 EKGK-F-------------------FIHDPSLATTGSVRGVVKAEIIDSMGNTYTVSRTI 100
Query: 120 --LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
L + K K T D+T++R + ++ + E+ +GVSK+ILN VIF
Sbjct: 101 ESLKAVKKFK----TLDSTVTRVSKDKKEKASITNRCADVDAELSVALGVSKSILNYVIF 156
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLN 236
CHQE +WP D+GK +KE FDEIFD+TK+NKALE+I K+ +D L+ +I + A Q
Sbjct: 157 CHQEELNWPFDQGKTLKERFDEIFDSTKFNKALETILKLHKD-LQGDIKSLNAEKQTFKV 215
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
E ++K+ + + ++ D + E++++I++ + P+ +K+ ++ + + + + K
Sbjct: 216 LVSEVENKETKLEEHKKRLDITKEKINDIDKQLVPLKQKIEEVQQSHSEYKNIQAEEEKK 275
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQERLKSQYIQ 355
K E + +E +L+ +I +F G EL + + L EK +E+ EN+ +K +
Sbjct: 276 KMEYGVYKERYQKLKETINNIFHGTTEELNALIESHDTILQEKNNEIAENEIEIKGISEK 335
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + S+ + +G ++ + H+K LN DT + T E +
Sbjct: 336 EARISNILATRRET-VGTFKQQVKDHEKRVVRRNELLNEALQAWNFDTVEQD-VTEIEVK 393
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
L K + I +I+ E Q E++ L +++ES+ +++I +
Sbjct: 394 ALTKRLEQKIRTLEQEIEENRMAMEKKEKQSQKEVDILCSNYLKIESEKTLKEKEITEIR 453
Query: 476 KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNEL 535
++T + QI ++ + + L+ ++ KL +ID+LS +LD D +K +I I+ R+++
Sbjct: 454 DEITTIRNQIAQIGAAGNKLKSIEQKLQAAKQKIDELSNALDVDSVKTDIANKIKSRDKI 513
Query: 536 EDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDM--IPE 593
E L ID EIS L + E K+ ++K ++ LK +H + L + + +
Sbjct: 514 EANLSAIDDEISSLHKLSSLKTEFDLKKSTLQAKEEELENLKRKHGNSIKTLLNTQELQQ 573
Query: 594 ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRM 653
K +LD+ + + + ++I A+E+ + + + +K L +R+
Sbjct: 574 TKLKITLDRVHQQLEKETTSLTQEIQAQERKTTAFQTTLQYIESDIGKKKTELHRDKERI 633
Query: 654 ELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFES 713
V K F++ L + +K Q++ + + YI KL +P CPLC R F+
Sbjct: 634 STVCDYKEFDETLLMQSKIVKDLQDKRGIYAYQATAYKEYIKKLSVKDPCCPLCHRNFQE 693
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR---SLQELKPVYENIMKLQDTDI 770
V L+ +++T I I Q N K ++L QQ ++ +LKP+ + I++ ++TD+
Sbjct: 694 QNKVTDLIKEMETDI--IRNQPNRLKKCEEELKIQQEKYDNMLQLKPIVQKIIQCEETDL 751
Query: 771 PSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQR 830
L +L + + +V +K +K L+ + P+ K + GD+ D+ I E+ L++
Sbjct: 752 KKLEERLEKTKNSVKLSKIAIKDLEVSKAEPEKKLLLYKDMIGDIKFWDRCIDEIQQLKK 811
Query: 831 ELERQESKIS--GMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
+ +++++ G+++ L+++ Q++ K R+ IE+ Q +LN HNE+L +
Sbjct: 812 TVNNLQTQMANAGVKTEKT-LEELQVQRESLKTSFKETRNHIEALQLKLNKHNERLHEAR 870
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
+ N++H +QL + LK L+D++ +L + +E+L +A E QL+ +
Sbjct: 871 ETYNELHEQQLKIHSDMQKLKHLKDKQEDLYVKEVTIGETVEKLQENLANAENQLDSGKQ 930
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
+L+ +K E+++K + + + + T++L ++ +I E+ ++ +LA+ ++
Sbjct: 931 QLEKIKLENRQKQDADRKLMMENTRRLTDLHKIIDEVDSFISSNVPKKLASYELEIETYQ 990
Query: 1009 QRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK----- 1063
+ ++I K+ E+ IN++ + +A+Q + + +L +N+TL + K+ + L E+ K
Sbjct: 991 KSLMELINKKKNVEQAINKLKEDVASQEIGKRELHDNITLRKTKDTIEALKEQYKKLNEK 1050
Query: 1064 LSEIMISDLTKYHHTLEN--------------------CVIKYHSQKMRSIN-RLIREYW 1102
L + S+LTK LE+ VIK + Q++R RL R +
Sbjct: 1051 LKNMNYSELTKKWEQLESEKQALLRQKNVALGNQEELERVIKQYMQELRKEEYRLARRNY 1110
Query: 1103 T-RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
T + +L + E I++L Y L+ +I+YH ++M ++NR++++ W +Y+G D I
Sbjct: 1111 TNKCIELTVQEDTIANLKAYSKILDTAMIEYHEERMSTVNRIMKKLWKHVYKGTDTSSIE 1170
Query: 1162 IAA----DVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
I DVG+ RR+Y Y+++Q K+G + DM+ RCSAGQ+VLA +IIRL
Sbjct: 1171 ICTEPTKDVGSN---RRSYTYKLIQTKHGCKMDMKGRCSAGQKVLASIIIRL-------- 1219
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
ALAETF ++CGI ALDEPTTNLD +NA+
Sbjct: 1220 -------------------------------ALAETFCKDCGILALDEPTTNLDEENANS 1248
Query: 1278 ---------------QKNFQLIVITHDEEFIENLTAID 1300
QKNFQLI+I+HDE+F++ L ++
Sbjct: 1249 LADTLTKVVELRSRYQKNFQLIIISHDEKFLQKLADLN 1286
>gi|195488694|ref|XP_002092422.1| GE14184 [Drosophila yakuba]
gi|194178523|gb|EDW92134.1| GE14184 [Drosophila yakuba]
Length = 1303
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 394/1364 (28%), Positives = 680/1364 (49%), Gaps = 157/1364 (11%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F A+ + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYAEDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKVKEANM 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +L+++ RN+
Sbjct: 218 KHVAYLKQEMEVKTLNLQQAQRKCDAIKAQCSECEEEMKPIEARLMEI----RNVEFEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE 347
+YQ +K E D ++C + L IK LF G AEL +++ N D++ E+ +
Sbjct: 274 KYQAQKVEMDTKHKNCKDQISTLTGKIKNLFGGTLAELDQEIS----NFDQRMQEVHQKR 329
Query: 348 RLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDT-------LKTKLNNLADTLC 400
+ + + K+S Q KLG +R K+ + + L ++ + +
Sbjct: 330 TVVEGDLSQIKRSKVS---EQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKDFCREVH 386
Query: 401 LDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVE 459
+ PE+ GE L + I K+ +I+E+ + ++Q +I+ L +E +
Sbjct: 387 ITINCDLVEQPEKMGEVLQDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIELTK 445
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
E + + ++Q E +K++ + QI ++ S L+ L+ ++N VN + +K +D
Sbjct: 446 SEQSVTAQEKQRESSKRESDTIGEQIKKIETSMQDLKKLEKEINDVNELYESANKDIDQQ 505
Query: 520 QLKNEI---EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINL 575
+K+ I +A I Q N++ + +D +++ L +AEI SLK ++ + K +++
Sbjct: 506 AIKDAIARQKASIAQ-NQI--QFKKLDEQLTFLGTMAKLVAEI-SLKQKELDKKNQEVHR 561
Query: 576 LKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNS 635
++ RH F F N++ S+ + +I + E N+++ + E N
Sbjct: 562 VRSRHSDNFGKFFKEPITCNYRRSMQGVYDKLRREIQDLNEKANSQKLKEQSFEIKRKN- 620
Query: 636 SKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
+ D + EL EL+ S P+ED L+R + + Q + + S++ L+
Sbjct: 621 --LIGDISQMEKELNMSEELIFEKCRSTPYEDLLERSKTAISKLQFDHGALKSSEALYKK 678
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
YI K++E EP CPLC SD + L ++L +I+++P+ + ++ + +L
Sbjct: 679 YIQKMDE-EPCCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALEAEQIKYENL 736
Query: 753 QELKPVYENIMKLQD--TDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS 810
++KP+ I+K++D +P + +L ++EE + E+ E + L + P + A S
Sbjct: 737 LQIKPI---ILKVKDLKNSLPQKKEELKKVEELLGESLSEYETLLALIGEPTHNMELANS 793
Query: 811 LQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKI 870
+ GD++LLD+ +++ L ++L++Q+ K+ + V +D + A++ + EL T R ++
Sbjct: 794 MMGDMSLLDEALKDSGRLTKDLDQQKGKLPASYDSSVSMDALQAEKSQVSKELETERKEL 853
Query: 871 ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELE 930
+S Q + L L+++KN + +Q+ ++ G L L++R +L + +E+
Sbjct: 854 DSAQNAFQQQMDALNRLREKKNSLKDRQIHLREGVQSLPQLKERLEKLHSFLATVASEIS 913
Query: 931 ELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTK 990
EL K+ P++ L A E + LKK KL + +K Y ++++R+ E +Y K
Sbjct: 914 ELKAKIQPLKLNLRKAIDEKERLKKSESDKLAQLNSKYNSYKSTDQDIQRLNKEAEDYAK 973
Query: 991 RGTLTQLAALRESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
LR ++KL++ +D + K C +NQ E DLK+N
Sbjct: 974 -------MDLRNEIKKLDEIITASKDQLRKLAKC-----------SNQQTVERDLKDNRE 1015
Query: 1048 LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS-------------- 1093
L + ++ +KL E + + +L H++ + Q+ ++
Sbjct: 1016 LKQLEDKESKLRESCQTLNKQLGNLD--FHSVSKEKVNLTKQRDKATVRKGELLGQLGEI 1073
Query: 1094 ---INRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMR 1138
+N+L RE + Y+++++ + I DL +Y LE +I++HS+KM
Sbjct: 1074 NSQVNKLQREIDEPRFKESLKNFRKASYEIEVTRLCIEDLGQYRLALEWALIQFHSEKME 1133
Query: 1139 SINRLIREYWTRIYQGNDIDYISIAAD-VGT--GSEKRRTYNYRVVQKKNGIEQDMRNRC 1195
INRLIREYW +IY+GNDIDYI + D V T +++R+TYNYRVVQ KN E +MR RC
Sbjct: 1134 MINRLIREYWRKIYRGNDIDYIQVKTDEVSTEASADRRKTYNYRVVQSKNYSEIEMRGRC 1193
Query: 1196 SAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFS 1255
SAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 1194 SAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEAL- 1241
Query: 1256 RNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 1242 -NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 1272
>gi|269914207|gb|ACZ52623.1| FI13085p [Drosophila melanogaster]
Length = 1322
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 391/1366 (28%), Positives = 676/1366 (49%), Gaps = 146/1366 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 5 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 64
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 65 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 104
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 105 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 161
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 162 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANI 221
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +LV++ RN+
Sbjct: 222 KHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RNVEFEIG 277
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFK---INLDEKCSELE 344
+YQ +K E D ++C + L IK+ F G EL +++ F + + +K +E+E
Sbjct: 278 KYQAQKVEMDTKHKNCKDQISTLTLKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVE 337
Query: 345 N------------QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
QE+L +Q + H +E + L+R +E ++L+
Sbjct: 338 GDLSQIKRSSVAEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELH------- 390
Query: 393 NNLADTLCLDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEIN 451
+ +D Q PE+ GE L + I K+ +I+E+ + ++Q +I+
Sbjct: 391 ------IPIDCDLVEQ--PEKMGEVLRDIEAMIITKHCEITEIVEQN-EKADRSRQVKID 441
Query: 452 ALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ 511
L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN +
Sbjct: 442 ELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINEVNELYES 501
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKL 570
+K++D +K+ I E + + +D +++ L + +AE SLK ++ + K
Sbjct: 502 ATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKN 560
Query: 571 ADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+++ ++ RH F LF N++ S+ + +I + E N ++ + E
Sbjct: 561 QEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEI 620
Query: 631 NVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQ 687
N + D R EL D EL+ S P++D L+R + + Q + + S++
Sbjct: 621 KRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSE 677
Query: 688 YLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 678 ALYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQI 735
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+ +L +LKP + +L+D+ +P + +L ++EE + ++ E + L + P +
Sbjct: 736 KYENLLQLKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMEL 794
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR 867
A S+ GD++LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R
Sbjct: 795 ANSMMGDMSLLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSKELETER 854
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
++ES Q + + L L+++KN + +Q+ ++ G L L++R +L + +
Sbjct: 855 KELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVAS 914
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
E+ EL K+ P++ L A E + LKK +KL + +K Y +++R+ E +
Sbjct: 915 EISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDHDIQRLNKEAED 974
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
Y K ++ L E + + + + + + I +NQ E DLK+N
Sbjct: 975 YAKLDLRNEIKKLDEIIMASKDKLRKLATEISLKTDELETIKTECSNQQTVERDLKDNRE 1034
Query: 1048 LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI-------------------KYHS 1088
L + ++ AKL E ++ + + +L + + E + + HS
Sbjct: 1035 LKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVNLTKQRDKATVRKGELLGQLGEIHS 1094
Query: 1089 QKMRSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
Q +N+L RE + Y+++++ + I DL +Y LE +I++HS+K
Sbjct: 1095 Q----VNKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEK 1150
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
M INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR
Sbjct: 1151 MEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRG 1210
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 1211 RCSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEA 1259
Query: 1254 FSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 1260 L--NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 1291
>gi|195346724|ref|XP_002039907.1| GM15911 [Drosophila sechellia]
gi|194135256|gb|EDW56772.1| GM15911 [Drosophila sechellia]
Length = 1303
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 394/1358 (29%), Positives = 677/1358 (49%), Gaps = 145/1358 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANM 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +LV++ RN+
Sbjct: 218 KHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIETRLVEI----RNVEFEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDE---KCSELE 344
+YQ +K E D ++C + L IK F G EL +++ F + E K +E+E
Sbjct: 274 KYQAQKVEMDTKHKNCKDQISTLTLKIKNPFRGTLDELDQEISNFDQRMQEMRQKRTEVE 333
Query: 345 -NQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEE--THKKLNDTLKTKLNNLADTLCL 401
N ++K + E Q I + + L K E +L +K L T+
Sbjct: 334 GNLSQIKRSSVAE--QDKLGIQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELHITIDC 391
Query: 402 DTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVEL 460
D + PE+ GE L + I K+ +I+E+ + ++Q +I+ L ++ +
Sbjct: 392 DLVEQ----PEKMGELLQDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIDLTKS 446
Query: 461 ESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQ 520
E + + ++Q + +K++ + +I ++ S L+ L+ ++N VN + +KS+D
Sbjct: 447 EQSVTAQEKQRQSSKRESETLGVEIKKIETSMQDLKKLEKEINEVNELYESANKSIDQQA 506
Query: 521 LKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKER 579
+K+ I E + + +D +++ L + +AE SLK ++ + K +++ ++ R
Sbjct: 507 IKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSR 565
Query: 580 HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
H F LF N++ S+ + +I + E N ++ + E N +
Sbjct: 566 HSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQDLNEKANTQKLKEQSYEIKRKN---LI 622
Query: 640 RDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGK 696
D R EL D EL+ S P++D L+R + + Q + + S++ L+ YI K
Sbjct: 623 SDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSEALYKKYIQK 682
Query: 697 LEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELK 756
++E EP CPLC SD + L ++L +I+++P+ + + + +L ++K
Sbjct: 683 MDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQIKYENLLQIK 740
Query: 757 PVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLT 816
P + +L+D+ +P + +L ++EE + ++ E + L + P + A S+ GD++
Sbjct: 741 PTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMELANSMMGDMS 799
Query: 817 LLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTR 876
LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R ++ES Q
Sbjct: 800 LLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSRELETERKELESAQNA 859
Query: 877 LNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKV 936
+ + L L+++KN + +Q+ ++ G L L++R +L + +E+ EL K+
Sbjct: 860 VQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVASEISELKAKI 919
Query: 937 APIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQ 996
P++ L A E ++LKK +KL + +K Y ++++R+ E +YTK
Sbjct: 920 QPLKLNLRAAIEEKESLKKSESEKLAQLNSKYNSYKSTDQDIQRLNKEAEDYTK------ 973
Query: 997 LAALRESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
LR ++KL++ +D + K C +NQ E DLK+N L + ++
Sbjct: 974 -LDLRNEIKKLDEIIRASKDQLRKLAKC-----------SNQQTVERDLKDNRELKQLED 1021
Query: 1054 AVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS-----------------INR 1096
AKL E ++ + + +L H++ + Q+ ++ +N+
Sbjct: 1022 KEAKLKESCQMLDKQLGNLD--FHSVSKEKVNLTKQRDKATVRKGELLGQLGEINSQVNK 1079
Query: 1097 LIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLI 1144
L RE + Y+++++ + I DL +Y LE +I++HS+KM INRLI
Sbjct: 1080 LQREIDEPRFKESLKNFRRANYEIEVTRLCIEDLGQYRLALEWALIQFHSEKMEMINRLI 1139
Query: 1145 REYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
REYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR RCSAGQRV
Sbjct: 1140 REYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRGRCSAGQRV 1199
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
LA LIIRL +++ + V+ DE T +DRA + +L E NC
Sbjct: 1200 LASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEAL--NCI-- 1244
Query: 1262 ALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
++ Q NF LI+ITHDE F+ +L I
Sbjct: 1245 ----------VEERQSQSNFMLIIITHDENFVSSLGKI 1272
>gi|301620437|ref|XP_002939584.1| PREDICTED: DNA repair protein RAD50 [Xenopus (Silurana) tropicalis]
Length = 1269
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 366/1325 (27%), Positives = 661/1325 (49%), Gaps = 184/1325 (13%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DKN+ V++F PLTL+VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIQGVRSFGIEDKNKQVIQFFTPLTLLVGPNGAGKTTIIECLKYITTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S GK FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------SKGKTFVHDPKVAHETDVRAQIRLQLKDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K T + I+R V + C + + EM + +GVS A+LNNVIFC
Sbjct: 100 MICTQKGKSTEFKTLEGVITRMKHGEKVSLSTKCAEMDK--EMISALGVSSAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EG+++K FDEIF AT+Y KALE+++ R + + E YQ + Y
Sbjct: 158 HQEDSNWPLSEGRQLKVKFDEIFSATRYIKALETLRKVRLNQAQNVRE----YQVEIKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQ----SFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K + I +N Q +++ S E + +IE ++P+ K+ Q T++E +S YQ
Sbjct: 214 KQNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPL--KVFQGTDEE-----LSDMYQ 266
Query: 295 T-KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
++T R E + KLN + ++D C E SQ
Sbjct: 267 NHQRTVR-----------------------EKERKLNDHQRDMDRACKE--------SQR 295
Query: 354 IQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEE 413
+ EK E ++ G+L+ + + H++ T + + +LA L LD ++ + +
Sbjct: 296 LNREK------GELLVQQGRLQLEADQHQQYIKTRDSLIKSLAAQLELDGFERTPFNQRQ 349
Query: 414 GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEG 473
+ + +K + + R FS+ E KQ +I+ + +K LE I+ K +
Sbjct: 350 TSNFQMLVKERQEKDEAHANQILREFSEREAMKQRQIDEIRDKKTGLERTIE-LKSSTQS 408
Query: 474 NKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
K DL NV ++ ++ S LQ L +L + E++ + KS + + L+ E+ Q+
Sbjct: 409 KKHTDLKNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVAQLQSQK 468
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
++L+ + +D E+ L +T ++ LK K K I +K RH+ L P
Sbjct: 469 SDLDRNVRKLDQEMEQLNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDELSSLIGYFP 528
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S D+N+ +E + K L E N ++ S LR ++ ++
Sbjct: 529 N---KKQLEDWLYSKRKDVNQTREKLARFTKELVAAEQNKNHLSNELRRKEEQSTSFEEK 585
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ F+ +L R+ ++++ ++ +M+ ++ +I L EEN+P CP+C R F
Sbjct: 586 VFDVCGSQDFDSDLSRLQDDIEKTSKQRAMLAGATAVYTQFITTLTEENQPCCPVCQRIF 645
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
S+ + ++N +++K++ +P++ + + + K++ + ELKP+ + + L++ ++P
Sbjct: 646 PSEAELQDVINDMQSKLRLVPDKLKAAEGELKRKEKRKDEMMELKPMRQMLADLKEKEVP 705
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
+R+KL+ + + K ++++ +T + T ++E++A + D++L+++ EL ++R+
Sbjct: 706 EIRNKLVAINREIQRLKNDVEEQETLIATFVSEEESAKACLQDISLMERYQMELRDVERK 765
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ + +K+ G VDL+ QV +++EK++ L+ KIE + R+ E++Q L
Sbjct: 766 IAQYATKLQG-----VDLNRTVQQVNQEKQEKQHSLDNVSGKIELLRKRIQDQQEQVQQL 820
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ N++ +++L + + LE++ EL E++E +V P+E+ L Q
Sbjct: 821 KSTVNELTAEKLHISSNLQRRQQLEEQNVELTTELQCLSREIKEAKEQVFPLESTLQKFQ 880
Query: 948 SELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKL 1007
E L + + E K+ D ++++++ +I Y + G +
Sbjct: 881 QEKQELLQRKELSYREAQEKVNDIKEKVKKINLFSKDIEKYIQDGK-----------EDF 929
Query: 1008 NQRKE----DIIAKRGVCERTINEINQSIAN-------QSLEEIDLKNNLTLLEKKEAVA 1056
++KE ++IA+ CE+ +IN+ + N Q ++E L++NLTL ++ E +
Sbjct: 930 KEQKECELQELIARLNECEKQKEKINREMVNIRQDIDTQKIQERCLQDNLTLRKRIEELK 989
Query: 1057 KLNEELK-----LSEIMISDLTKYHHTLEN---CVIKYHS----------QKMRSINRLI 1098
++ EE + + ++ + + H LEN + HS ++ + +
Sbjct: 990 RVEEERQQLLKEMGQMKVMQMKNEHQELENKSETLKTNHSLALGRQKGFEDEILRFKKEL 1049
Query: 1099 RE---------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
RE Y ++ ++ +E+ I DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1050 REPQYKDAEEKYRDKMIVMRTTELAIKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWR 1109
Query: 1150 RIYQGNDIDYISIAADVGTG---SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLI 1206
Y+G DI+YI I +D G ++KRRTYNYRVV K DMR RCSAGQ+VLA LI
Sbjct: 1110 STYRGQDIEYIEIRSDADEGVSAADKRRTYNYRVVMIKGDTALDMRGRCSAGQKVLASLI 1169
Query: 1207 IRLFISD---------------------------------------QKNFQLIVITHDEE 1227
IRL +++ Q+NFQL+VITHDE+
Sbjct: 1170 IRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLVVITHDED 1229
Query: 1228 FIENL 1232
F+E L
Sbjct: 1230 FVELL 1234
>gi|194754908|ref|XP_001959734.1| GF11892 [Drosophila ananassae]
gi|190621032|gb|EDV36556.1| GF11892 [Drosophila ananassae]
Length = 1308
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 389/1362 (28%), Positives = 669/1362 (49%), Gaps = 127/1362 (9%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I G+R+F A+ + + F P+TLI+GENGCGKTTIIEC+K+ALT E P G
Sbjct: 1 MSSIEKLSIQGVRSFGSNAEDMQSITFSSPVTLILGENGCGKTTIIECLKYALTGESPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GKNFV HDP+I +E+ A +K++ + V + R+
Sbjct: 61 SEKGKNFV--------------------HDPKIFGNNESLAQIKMKVRDKRGAEVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV------QKNLGCLQQESVLEMCNLIGVSKAIL 172
+ ++ + G T D+T++ F T Q +L + + + +GVSKAI+
Sbjct: 101 MKVTRQRGLMTFKTMDSTLN---FLTDGGQPKRDQDSLSGRVNDIDQAISDFMGVSKAII 157
Query: 173 NNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQ 232
NNV+FCHQE+SSWPLDE KK+KE FD IF ++Y+KAL+ I R +++ ++A+ +
Sbjct: 158 NNVLFCHQEDSSWPLDEPKKLKEKFDAIFGISEYDKALDKIIKMRKEATEDLRLMEANIK 217
Query: 233 ATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
KKE ++K + +K + + ++ EE MKPI +L ++ RN+ +
Sbjct: 218 HVEYLKKEMEAKTLSLQKAQEKCNSVKSQCNDCEEEMKPIEARLTEI----RNIESEVGK 273
Query: 293 YQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER 348
YQ +K E D ++C E + IK LF G EL+ ++ +N D++ SE++ Q
Sbjct: 274 YQAQKVEMDTKHKNCKEQIATISRKIKTLFEGSLVELEMEI----VNFDQRMSEMQRQCT 329
Query: 349 LKSQYIQEEKQSHTHI------NEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLD 402
+ + + K+S + ++ + L K + E K L ++ L +
Sbjct: 330 EAEEELSQLKKSSGIVKDRLATHDKKQVLAKQQHQSEQACKAQ--LLRRVKEFCRELQIP 387
Query: 403 TTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELES 462
S PE+ E +++ + I +I + + +QA+I+ L ++ + E
Sbjct: 388 IEENSIGQPEKLEEVLQDIEAVIMSKHCEIAEIGDQNDKADQKRQAKIDELRIDLTKSEQ 447
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+ + ++Q E +K++ + I + S L+ L+ K+ N + +K+ D ++
Sbjct: 448 SVAAQEKQREQSKRESETLEVDIQRIEASMHELKQLEKKIADANELYENTTKNYDQQAMR 507
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
+ I A E + E +D +++ L + +AEI + E K +++ ++ RH
Sbjct: 508 DVIAAKKSFIAEKQAEFKKLDEQLTFLGSMAKLVAEIGLKQKELEKKTQEVHRVRSRHSD 567
Query: 583 AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
F F N++ S+ A + +I + E NA++ + E N + D
Sbjct: 568 NFGKFFKEKISGNYRRSMQGAYDKLNREIKDLNEKANAQKFKEQSYEIKRKN---LIGDI 624
Query: 643 KRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEE 699
R EL + EL+ S P+++ LDR + + + Q + + S + L+ YI K+EE
Sbjct: 625 GRMEKELKESEELIFQKCRSTPYDELLDRSKVAITKLQFDHGALKSAEALYKKYIQKIEE 684
Query: 700 NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
EP CPLC D + L +L +I+++PE + + + +L +LKP
Sbjct: 685 -EPCCPLCHHNMSGDEAC-DLTTELTDEIQKLPENIIRAEKALKTETLKYENLLQLKP-- 740
Query: 760 ENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTL 817
NI+K++D +P + +L ++EE + ET E + + + P + A S+ GD+TL
Sbjct: 741 -NIIKVKDLKEALPKKKEELKQVEELLGETVSEYETILALIGEPTHNMELANSMMGDMTL 799
Query: 818 LDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRL 877
LD+ ++E L+++LE Q++K+ + V +D + A++ + +L R +E+ QT
Sbjct: 800 LDEALKESARLEKDLELQKAKLPPSYDSSVSMDALQAEKSQVSKDLEAERKDLETHQTTF 859
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVA 937
H + L +++ KN + +Q+ +Q G L L++R +L + TE+ EL K+
Sbjct: 860 QQHLDALNRVREIKNGLKDRQIKLQEGLQSLPQLKERYEKLTTFLTTVTTEINELRSKIQ 919
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
P++ L A SE + LK+ + KL + +K Y ++++R+ E NY K +++
Sbjct: 920 PLKQDLRAAISEKERLKESERTKLAQLNSKYNSYKSTDQDIQRLNNEAQNYAKLDLKSEI 979
Query: 998 AALRESVQKLNQ--RKED--IIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
+ L E ++ N+ RK + I +K G + I NQ E DLK+N L + +E
Sbjct: 980 SKLEEVIKASNEQIRKLELQIDSKTG----QVESIKTECRNQQNVERDLKDNRELKQLQE 1035
Query: 1054 AVAKLNEEL-----KLSEIMISDLTKYHHTLE--------------------NCVIKYHS 1088
+KL+E +L + +TK L NC +K
Sbjct: 1036 KESKLSESCVALSKQLGNLDFRSVTKEKLELTKRRDASTVRKGELLGQLGEINCQVKRLE 1095
Query: 1089 QKM--RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1146
Q++ + + + Y+L + I DL +Y LE +I++H++KM +INRLIRE
Sbjct: 1096 QEIDEPKLKESFKNFQKANYELVVMRRCIDDLGQYRMALEWALIQFHAEKMENINRLIRE 1155
Query: 1147 YWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLA 1203
YW IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR RCSAGQRVLA
Sbjct: 1156 YWRMIYRGNDIDYIQVKTDDISANANADRRKTYNYRVVQSKNNTEIEMRGRCSAGQRVLA 1215
Query: 1204 CLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL 1263
LIIR+ +++ + V+ DE T +DR + + C
Sbjct: 1216 SLIIRMALAETFSSNCGVLALDEP----TTNLDRINITSL--------------CDAL-- 1255
Query: 1264 DEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVV 1305
N ++ Q NF LI+ITHDE FI +L I+ + V
Sbjct: 1256 -----NCIVEERQSQSNFMLIIITHDENFISSLGKINSYHRV 1292
>gi|195585702|ref|XP_002082619.1| GD11670 [Drosophila simulans]
gi|194194628|gb|EDX08204.1| GD11670 [Drosophila simulans]
Length = 1301
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 398/1371 (29%), Positives = 673/1371 (49%), Gaps = 173/1371 (12%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPE---IK 228
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I +LRKE E IK
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKII----KLRKEAMEELKIK 213
Query: 229 AHYQATLNYKKEADSKKQLIYNNTQKR-DQSFEELHNIEESMKPINEKLVQLTEKERNMS 287
+ Y K+ K L Q++ D + EE MKPI +LV++ RN+
Sbjct: 214 EGNMKHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RNVE 269
Query: 288 VMSTQYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDE----- 338
+YQ +K E D ++C + L IK F G EL +++ F + E
Sbjct: 270 FEIGKYQAQKVEMDTKHKNCKDQISTLTLKIKNPFRGTLDELDQEISNFDQRMQEMRQKR 329
Query: 339 ----------KCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTL 388
K S + QE+L +Q + H +E + L+R +E ++L+ T+
Sbjct: 330 TEVEGNLSQIKRSSVAEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELHITI 389
Query: 389 KTKLNNLADTLCLDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQ 447
L PE+ GE L + I K+ +I E+ + ++Q
Sbjct: 390 DCDLVE---------------QPEKMGEVLQDIEAMIITKHCEITEIFEQN-EKADRSRQ 433
Query: 448 AEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNS 507
+I+ L ++ + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN
Sbjct: 434 VKIDELRIDLTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKELEKEINEVNE 493
Query: 508 EIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK- 566
+ +KS+D +K+ I E + + +D +++ L + +AE SLK ++
Sbjct: 494 LYESANKSIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKEL 552
Query: 567 ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLY 626
+ K +++ ++ RH F LF N++ S+ + +I + E N ++
Sbjct: 553 DKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQDLNEKANTQKLKEQ 612
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMM 683
+ E N + D R EL D EL+ S P++D L+R + + Q + +
Sbjct: 613 SYEIKRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGAL 669
Query: 684 TSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHID 743
S++ L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 670 KSSEALYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALK 727
Query: 744 QLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKT 803
+ +L ++KP + +L+D+ +P + +L ++EE + ++ E + L + P
Sbjct: 728 AEQIKYENLLQIKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTH 786
Query: 804 KEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNEL 863
+ A S+ GD++ LD+ +++ L ++L+ Q+ ++ + V +D + ++ + EL
Sbjct: 787 NMELANSMMGDMSXLDEALKDSVRLTKDLDLQKGQLPASYDSSVSMDDLQTEKSKVSREL 846
Query: 864 NTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDS 923
T R ++ES Q + + L L+++KN + +Q+ ++ G L L++R +L +
Sbjct: 847 ETERKELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLT 906
Query: 924 VYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKL 983
+E+ EL K+ P++ L A E + LKK +KL + +K Y ++++R+
Sbjct: 907 TVASEISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDQDIQRLNK 966
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEI 1040
E +Y K LR ++KL++ +D + K C +NQ E
Sbjct: 967 EAEDYAK-------LDLRNEIKKLDEIIKASKDQLRKLAKC-----------SNQQTVER 1008
Query: 1041 DLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS------- 1093
DLK+N L + ++ AKL E ++ + + +L H++ + Q+ ++
Sbjct: 1009 DLKDNRELKQLEDKEAKLKESCQMLDKQLGNLD--FHSVSKEKVNLTKQRDKATVRKGEL 1066
Query: 1094 ----------INRLIREYWTRI------------YQLKLSEIMISDLTKYHHTLENCVIK 1131
+N+L RE I Y+++++ + I DL +Y LE +I+
Sbjct: 1067 LGQLGEINSQVNKLQREIDEPIFKESLKNFRRANYEIEVTRLCIEDLGQYRLALEWALIQ 1126
Query: 1132 YHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIE 1188
+HS+KM INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E
Sbjct: 1127 FHSEKMEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSE 1186
Query: 1189 QDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHK 1248
+MR RCSAGQRVLA LIIRL +++ + V+ DE T +DRA +
Sbjct: 1187 IEMRGRCSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANIT------- 1235
Query: 1249 ALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
+L E NC I+ S Q NF LI+ITHDE F+ +L I
Sbjct: 1236 SLCEAL--NC-------------IERRS-QSNFMLIIITHDENFVSSLGKI 1270
>gi|327265278|ref|XP_003217435.1| PREDICTED: DNA repair protein RAD50-like [Anolis carolinensis]
Length = 1312
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 373/1333 (27%), Positives = 668/1333 (50%), Gaps = 123/1333 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D++ I+G+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIDKMSILGVRSFGIEDKDKQVISFFNPLTILVGPNGAGKTTIIECLKYVCTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G +FVHDP++ + + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNSFVHDPKVAHETDVRAQIRLQFRDVNGELLAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKGKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISALGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + + + E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQAQRVKEC----QVELRYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNM-SVMSTQY 293
K+ K I N R+ S E + +IE ++P+ + LTE E N+ VM
Sbjct: 214 KQNKEKAHEIQNQLSNREAQLAASKENVRSIENQLEPLKNR---LTEIELNLVKVMKLDN 270
Query: 294 QTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
K E + +++ +L+ ++++F G +L+ + + EK L + +R
Sbjct: 271 DIKALESRKKQMEKDNQDLQQKMEKVFQGTDEQLREMYQNHQKTVREKERRLTDCQRELE 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+ +E ++ + +E ++ G+L+ + H++ T + + +LA L L+ ++ +
Sbjct: 331 RANKECQRFNREKSELLVEQGRLQVQADRHQQHISTRDSLIQSLAAQLELEGFKRAPFNE 390
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ K+ + DK L R F + E TKQ +I+ + +K LE I+ K I
Sbjct: 391 RQINSFHKLVKERQDKDKEAADQLTREFEEKEATKQKQIDEIRDKKTGLERTIE-LKSDI 449
Query: 472 EGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
+ K+ ++ N+ ++ ++ S L + +L + N E+D K+ D L+ EI+ +
Sbjct: 450 QSKKRLEVKNLKQELQQLEGSSDRLLEIDQELAKANHELDDAEKNCKVDILEKEIKELQK 509
Query: 531 QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDM 590
++++L+ L +D E+ L + ++ LK K K I +K RH+ L
Sbjct: 510 EKSDLDGILRKLDKEMEQLNLNTTIITQMDMLKKDKADKEEQIRKIKSRHNEELISLLGY 569
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
P K L+ L S +IN+ ++ + K L ++E N ++ S L+ ++ L+
Sbjct: 570 FPN---KRQLEDWLHSKMKEINQTRDRLAKLNKELVSVEQNKNHISTELKKKEEQLSSYE 626
Query: 651 DRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTR 709
+++ V GS+ FE +L R+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R
Sbjct: 627 EQLFDVCGSQDFESDLYRLQEEIEKTSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQR 686
Query: 710 FFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTD 769
F ++ + +++ L+ K++ P++ ++ + + K++ + LKPV + I +LQ+ D
Sbjct: 687 VFGTESELQEVIDDLQKKLRLAPDKLKTTESELKRREKRRDEMMSLKPVRQTISELQEKD 746
Query: 770 IPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQ 829
IP LR+KL L + KGE+++ +T L T +E++A + D+TL+++ +L ++
Sbjct: 747 IPDLRNKLQALNREIQRLKGEIEEQETLLATIMPEEESAKACLQDITLMERYQTDLRDVE 806
Query: 830 RELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK 889
R++ + +K+ G+ G L QV +++EKK++ +T KIE QT ++QSL+
Sbjct: 807 RKIAQHSTKLEGV-DLGRTLLQVSQEKQEKKHQWDTVTGKIELKQTLKQDQQSQVQSLKS 865
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE 949
N++ +++L + + LED+ EL E++E +++P+ET L Q E
Sbjct: 866 AVNELKAEKLQLCSRLQHRQQLEDQTVELTTEVQSMNREIKEAKEQISPLETTLIKLQQE 925
Query: 950 LDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+AL + KI D ++++ + EI NY + G + +ES +L+Q
Sbjct: 926 KEALMNKKNTSCRATQEKINDIKEKVKNINCYVKEIENYIQEGK-EEYKQQKES--ELDQ 982
Query: 1010 RKEDI---IAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK--- 1063
K + K+ + I Q I Q ++E L++NLTL ++ E + ++ + +K
Sbjct: 983 VKVQLEECEKKKEKINKETGTIRQDIDTQKIQERWLEDNLTLRKRNEDLKEVEDNIKQYR 1042
Query: 1064 --LSEIMISDLTK---------------------YHHTLENCVIKYHSQ-KMRSINRLIR 1099
+ E+ + L K H E +++Y + +
Sbjct: 1043 KEMGEMHVPQLKKDREHLEGRIEELKRNHSLALGRQHGFEEEILRYKKELRDPQFKDAEE 1102
Query: 1100 EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
+Y + ++ +E+ DL Y+ L+ ++ +HS KM IN+ IR+ W Y+G DI+Y
Sbjct: 1103 KYREMMIVMRTTELANKDLDIYYKALDQAIMTFHSMKMEEINKTIRDLWRSTYRGQDIEY 1162
Query: 1160 ISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI----- 1211
I I +D + S+KRR+YNYRVV K DMR RCSAGQ+VLA LIIRL +
Sbjct: 1163 IEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAESFC 1222
Query: 1212 ----------------------------------SDQKNFQLIVITHDEEFIENLTAIDR 1237
S Q+NFQL+VITHDE+F+E L+ +
Sbjct: 1223 LNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLSRSE- 1281
Query: 1238 AYVVRIVRDHKAL 1250
YV + R K L
Sbjct: 1282 -YVEKFYRIKKNL 1293
>gi|242022760|ref|XP_002431806.1| DNA repair protein RAD50, putative [Pediculus humanus corporis]
gi|212517138|gb|EEB19068.1| DNA repair protein RAD50, putative [Pediculus humanus corporis]
Length = 1330
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 371/1343 (27%), Positives = 660/1343 (49%), Gaps = 105/1343 (7%)
Query: 1 MALLDQLHIMGIRNFPADKN--RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA L+++ I GIR+F ++ + V FQ+PLTLI+GENGCGK+TIIEC+++ + P G
Sbjct: 1 MATLNKIKICGIRSFGCEEEDMQTVHFQKPLTLILGENGCGKSTIIECLRYVTAQKEPAG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ FV+DP + ++ VKL+ D V + R
Sbjct: 61 KGT-----------------------FVYDPSLTNRNTVKGFVKLRMWDVKGDVVDLCRQ 97
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + + D I+R T + ++ + E+ + GVS++IL NVIFC
Sbjct: 98 VQATRTKKSLTTKSLDNVITRTDRETKEKVSISNRCADFTFEISRIFGVSRSILENVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
Q++S WPLD +K+KE FD+IFD+ KYNK + ++ +R +L+ ++ + L Y
Sbjct: 158 TQDDSHWPLDTDQKLKEKFDQIFDSDKYNKCVNKVREKRKKLK----DVLKSTEIELKYL 213
Query: 239 KE----ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
KE A K++++ + + EE+ + ++ + KL ++ EKE +S +
Sbjct: 214 KENKNIAVEKRRVMEKTKLQVESCKEEIFELNSALVDVENKLKEVNEKELTISKSHANKE 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
KK E + EL+S IK ++G EL+ ++ F L K E+ ++E Y
Sbjct: 274 MKKAELKGNENILTELKSRIKNFYNGTDEELEKEIKDFNKQLSFKQKEINDEENNVKNYT 333
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
EE + Q LG+L +++E + + + +L LA TL + T S+
Sbjct: 334 AEEMSLTNKLMNEQGMLGQLLKEDELNNERIERRNKELVKLASTL--EITVDSEIDDNSI 391
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
+ L+ I K + K ++ + + Q +I+ + E + +S++ + ++ ++
Sbjct: 392 QELMNGVNKKIKKEEENFKKTKQWLEEEDQNSQIKIDKIREEYLTTQSEMSAKEKNLKNI 451
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
K + ++ E+++S L+ L++KL+ VN +I+ L K+ D + L+ I+ + +RN+
Sbjct: 452 KTQREKIKLELYEMDESAGKLKRLESKLSEVNLDIENLEKTTDVETLRENIKKYSNERNK 511
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
LED+L ++ ++ LQ + E++ K +K + L +H+ + +P+
Sbjct: 512 LEDDLSEMEDKVKELQKHSSLATELEVQLELKSNKDSQYRRLINKHEDNLQTILGEVPKS 571
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
FK +L + + + + KEK L LE + L+ ++ L + +
Sbjct: 572 KFKMALQNHFLNARQKVKEVSALRSKKEKELTELEMKRKHLKDKLKAKEEVLRTNEEDIY 631
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESD 714
+ GS F++ + R+ E++ Q+ ++S+++++ YI LE+ EP CPLC R F +
Sbjct: 632 EICGSDDFDETVSRLQKEIEELQDIKGTLSSSEFMYQRYIRALEKTEPCCPLCHRDFTRE 691
Query: 715 YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLR 774
LV +L +KI+++P + KT +++ + L LK + I L+D +IP ++
Sbjct: 692 SDARSLVEELNSKIRQVPRRLQENKTQLEEKQTKYNKLLTLKSKNDEISSLKDGEIPEIK 751
Query: 775 SKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER 834
S+L + ++ + + EL + + + + E LSLQ D+ LLD+ E + +Q+++
Sbjct: 752 SELDAVSSSLKKKQKELSDVGNEISSSQADEAICLSLQDDMVLLDELQSERDYMQKQINS 811
Query: 835 QESKISGMRSTGVDLDQVLAQQKE---KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQK 891
+ ++ + G+D + + Q E K+ L R K + QT LN+ N+K+Q Q +
Sbjct: 812 LQDRLG---NKGIDKNTLKNVQDECDRKRQNLKLARVKADEFQTELNNFNDKIQGKQTLR 868
Query: 892 NDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELD 951
N + + +QG G L +R +LEG +++ ELE+L + N+ + LD
Sbjct: 869 NSLIEEINKIQGSIGKKTGLIERVQDLEGEEAILIAELEDLKKNS-------NVRKKNLD 921
Query: 952 ALKKEHKKKLNEE-------GAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
L E K + N+ KI K +E+ I ++ K+G ++ ++E++
Sbjct: 922 ELLSERKLEKNKNMEIIERITNKINKLMKDFDEINCQNKIIEDHGKKGISEKIQVVQETM 981
Query: 1005 QKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL---------------- 1048
+K +I K+ + IN I + I NQ L E +L +NL
Sbjct: 982 KKFEMEIREIKNKKEDSGKKINNIKKGITNQELVERELNDNLRYRRKTIETENLRKEVED 1041
Query: 1049 LEKKEAVAKLNEELKLSEIMIS---DLTKYHHTLENCVIKYHSQ-KM-------RSINRL 1097
+EKK A + L+ + S D+ K ++ + + +Q KM +++ +
Sbjct: 1042 MEKKFGNANFDGLLREKRNLKSKEDDIGKRKAQIQGRMSEMENQMKMIEKELLGKTLRNI 1101
Query: 1098 IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
Y + ++ + + +DL +Y T+E ++ YH Q+M +N IREYW +IYQGNDI
Sbjct: 1102 DENYNNENLKFEVIKAIGNDLERYATTMEYAMMTYHKQQMTRVNAFIREYWRKIYQGNDI 1161
Query: 1158 DYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
DYI I D +EKRR YNY+VVQ K+ + +MRNRCSAGQ++LA LIIRL +++ +
Sbjct: 1162 DYIEIQTDNIESTEKRRNYNYKVVQIKSNVHLEMRNRCSAGQKMLASLIIRLALAETFSS 1221
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
++T DE T +DR + K LA T N + A K S
Sbjct: 1222 NCGILTLDEP----TTNLDRKNI-------KNLARTL--NEVLLA----------KQNSS 1258
Query: 1278 QKNFQLIVITHDEEFIENLTAID 1300
+ NFQLIVITHDEEF++ L +D
Sbjct: 1259 KPNFQLIVITHDEEFLQELMELD 1281
>gi|383858718|ref|XP_003704846.1| PREDICTED: DNA repair protein RAD50-like [Megachile rotundata]
Length = 1378
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 381/1365 (27%), Positives = 691/1365 (50%), Gaps = 143/1365 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNR--VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ + +L I GIRNF D+N ++F RPLTLI+G NG GKTTIIE +KFA E+P G
Sbjct: 1 MSRIRRLSIRGIRNF-GDENEESTIKFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPG 59
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK F+H DP + +VK + + + R+
Sbjct: 60 SDRGKYFIH--------------------DPALTTTSSVRGVVKAEIADAAGNIYTICRT 99
Query: 119 LLLSNKNGKDNCATRDTTISR--KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
+ S N T D+ +SR K+ V C ++ E+ +GVSK IL+ VI
Sbjct: 100 IEYSKANSAMRFKTLDSALSRISKVTKEVVSITNRCTNVDT--EITLAMGVSKPILDYVI 157
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQE+ +WP EGKK+KE FDEIFD+ +YNKALE+I Q LR+ I +K Q L
Sbjct: 158 FCHQEDLNWPFVEGKKLKEKFDEIFDSARYNKALENIMKQIKDLRQRILILKEQKQNCLY 217
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
E + K+ + ++ ++ + +++ I E ++P+ +K+ ++ + + + + ++ + K
Sbjct: 218 IVSELEDKETKLEDHKKRLETIKQKIEEINEDLEPVTQKIAEIEKLDSDYKDLMSEEKRK 277
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
KTE M +E +L+ +I ++F G EL+ +L + NL +K E++ E ++E
Sbjct: 278 KTEYMMSKEQVEKLKENITEIFEGTLKELEEQLKSYDGNLIKKVDEIKELETQLKDIVKE 337
Query: 357 EKQSHTHINEAQMKLGKLE---RDEET-----HKKLNDTLKT-KLNNLADTLC-LDTTAK 406
E + + + ++ G L +D+E +K LN+ L L N+ + L+ A
Sbjct: 338 ESKISKMLADERVTNGSLRQQIKDQERKVTLRNKILNEALSAWNLENIDSNVSELEVIAL 397
Query: 407 SQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKS 466
S+ E KM + ++K L + ++ + E Q ++ L EK+++ES+ KS
Sbjct: 398 SKRLEE------KMWE--LNKKLDENRM---QREEEEKEVQKTVDILRSEKLKVESQ-KS 445
Query: 467 FKQ-QIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
K+ ++ + +L + +I ++ + + L +++K+ ++++QL++ +D D +K E+
Sbjct: 446 IKENEMTETRDELNKIKMEILQIGAAANKLNSIESKIKETKNKLEQLNEIMDVDTMKKEV 505
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
+ RN+LE L +D EIS L Q+ AE++ K+ SK +I LKE+H+
Sbjct: 506 LNKTQSRNKLETRLNSVDEEISSLLKQSSLQAELELNKSSLLSKEKEIQKLKEKHEEKIT 565
Query: 586 LLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQK 643
L ++ +P K+ LD + ++ +I ++I +E TLE + + L+ +K
Sbjct: 566 KLLNIPELPLSKLKSDLDTVQKQLMNEMEQINQEIQTEEHQSTTLETTIKHLDHELQKKK 625
Query: 644 RTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPR 703
+ + ++ + K F++ L + ++K Q+ M + Y+ +L+E P
Sbjct: 626 KEIESDKQKIASICYYKNFDETLLLQSRKVKDLQDRRGMYAHQGAAYKEYMKQLKETNPC 685
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CPLC R F+ +V L+ +++ +++ P + +T + ++ + +LKPV E I+
Sbjct: 686 CPLCHRGFDEREAVVTLLKEMEKEMESHPNRLKECETELKIQQEKYDKMLQLKPVVEKIV 745
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIR 823
+L++ ++ + + L + + + ++ + KLK P+ K + D+TL D I
Sbjct: 746 QLEEMELGMMMNNLEKSKNKLTSSQKVITKLKEKKSDPENKLTICNEIMNDITLWDNYID 805
Query: 824 ELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTF----RSKIESGQTRLNS 879
E++ ++ + +++ M + G+ D+ L + + + EL T ++IE Q+++N+
Sbjct: 806 EISKFKQLINNFQTR---MINAGIKTDRSLEEAQADREELKTLLKNTSNEIEILQSKINT 862
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
HNEK+ + ++++N +H ++L ++ LK L+D++ L + + L+ L +K+
Sbjct: 863 HNEKINNAREEQNKLHEEKLKIESNMQNLKQLKDQQESLYSKEISLGSLLDSLRQKMTSA 922
Query: 940 ETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA 999
E++LN A +L+ KKE+ +K + + D +++L E+++ + E+ + + + +
Sbjct: 923 ESELNEAVDKLEKKKKENWEKQETDRKLLADGSRRLSELQKAQDEV-DISIYHKIPEAVE 981
Query: 1000 LRES-VQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKL 1058
ES ++ Q ++++ K+ E I+++ + I+ Q + + +L +N+ L + +E KL
Sbjct: 982 RSESQIKSYQQSIDELLQKKSNTESKISKLKEDISRQEIRKRELSDNILLRKNEETTTKL 1041
Query: 1059 NEEL-----KLSEIMIS-------DLTKYHHTL--------------ENCVIKYHSQKMR 1092
+E KLS + S DL L E V ++ + +
Sbjct: 1042 EKEYLSLKEKLSAVNYSQMLEERKDLQSLEQALLRKKNMIKGNQEELERAVKQFSDELKK 1101
Query: 1093 SINRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
I R R+ + T+ +L + E IS+L Y L+ +I+YH ++M ++NR++RE W +
Sbjct: 1102 DIYRQARKNHKTKCIELTVVEETISNLKAYSKVLDVAMIEYHEERMSTVNRIMREMWRLV 1161
Query: 1152 YQGNDIDYISIAADVGTG-SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
Y G D I I D G RRTYNY++VQ K+G E DM+ RCSAGQ+VLA +IIRL
Sbjct: 1162 YTGTDTTSIEIRTDATEGIGNLRRTYNYKLVQTKHGREIDMKGRCSAGQKVLASIIIRL- 1220
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
ALAETF +NCG+ ALDEPTTNL
Sbjct: 1221 --------------------------------------ALAETFCKNCGVLALDEPTTNL 1242
Query: 1271 DIKNASD---------------QKNFQLIVITHDEEFIENLTAID 1300
D +NA QKNFQLIVI+HDE+F+ L ++
Sbjct: 1243 DQENADSLASALATVVKLRAQHQKNFQLIVISHDEKFLLKLAELN 1287
>gi|198458384|ref|XP_001361018.2| GA19522 [Drosophila pseudoobscura pseudoobscura]
gi|198136325|gb|EAL25594.2| GA19522 [Drosophila pseudoobscura pseudoobscura]
Length = 1312
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 381/1360 (28%), Positives = 673/1360 (49%), Gaps = 131/1360 (9%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D+L I G+R+F A+ + + F P+TLI+GENGCGKTT+IECIK+ALT E P G
Sbjct: 1 MSSIDKLSIQGVRSFGSNAEDLQSLTFSSPVTLILGENGCGKTTVIECIKYALTGESPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E+ A +K+Q + V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNESLAQIKMQVRDKRGARVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV----QKNLGCLQQESV---LEMCNLIGVSKAI 171
+ + +K GK + T D+TI+ F T ++N L +V L + + +GVSKAI
Sbjct: 101 MKVCSKRGKVSFETMDSTIN---FLTDAGHSKRENQDSLSGRTVDIDLAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R E+ ++A
Sbjct: 158 INNVLFCHQEDSSWPLDEAKKLKEKFDAIFGITEYNKALDKIIKMRKEAMDELKVMEAGM 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +L ++ R++
Sbjct: 218 KHVAYLKQEMEVKTLGLQKAQKKCDSIKAQCSECEEEMKPIECRLQEI----RDIEYEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE 347
++Q +K E D ++C E L S IK F G +L +++ N ++ SE+
Sbjct: 274 KHQAQKVEMDTKHKNCKEQISALSSKIKTHFEGSLVDLDLEID----NFHQRMSEM---- 325
Query: 348 RLKSQYIQEE----KQSHTHINEAQMKLGK----LERDEETHKKLNDTLKTKLNNLADTL 399
RLK +E+ K+SH ++ Q K ++ ++ + L ++ +L L
Sbjct: 326 RLKRSETEEQLSKLKKSHGETHQTQTAQDKKCCLAKQRHQSEQACKTQLVKRVKDLCHEL 385
Query: 400 CLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVE 459
+ PE+ L++ + I +I + + + +Q +I+ L ++ +
Sbjct: 386 QIPIPGDLMAEPEKLVDLLQDIEGVILSKHCEITEVSGHNDNADKARQVKIDELRIDLTK 445
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
E + + ++Q E ++++ + ++ ++ S L++L+ ++ ++ ++ SK+ + +
Sbjct: 446 SEQGVTAQEKQKEASQRESETLKVKVQQIETSMQELKLLEKQIADADAIYERTSKNFNQE 505
Query: 520 QLKNEI---EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL 576
+ I +A I Q+ L +L D +++ L + +AE+ + E K +I+ +
Sbjct: 506 NFREIIAGKKANIAQKQALFKKL---DEKLTFLGSMAKLVAEMNLKEKEVEKKNQEIHRV 562
Query: 577 KERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN----V 632
+ RH F F N++ SL A + +I + E NA++ + E +
Sbjct: 563 RSRHSDNFGKFFKEPISSNYRRSLQGAYDKVRREIQDLNEQANAQKLKEQSYEIKRKNLI 622
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
+ +++ ++ K + + S P+++ LDR L + + Q E S + L+
Sbjct: 623 AETARMEKELKEAEELIFQKCR----STPYDELLDRSKLAISKLQLEHGAHKSAEALYKK 678
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
YI K+ E EP CPLC D + L +L +I+++P+ + + + + +L
Sbjct: 679 YIQKINE-EPCCPLCHHNMSGDEAC-DLTTELSDEIQKLPDNISRSEKALKAEQLKYENL 736
Query: 753 QELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQ 812
+KP + +L++ +P + +L E+E + ET E + L + P A S+
Sbjct: 737 LHIKPSILKVKELKEI-LPKKKEELTEVEMLLGETVSEYETLIALIGEPTQNMDLANSML 795
Query: 813 GDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIES 872
GD+TLLD+ +++ ++++L++ +SK+ + V +D + A++ + +L T R +++S
Sbjct: 796 GDMTLLDEALKDSVRVKKDLDQLKSKLPASYDSSVSMDALQAEKSQVSKDLETERKELDS 855
Query: 873 GQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEEL 932
Q H + L L++ KN + KQL +Q G L L++R EL + TE+ EL
Sbjct: 856 TQHTFEQHVDALNRLREVKNGLKDKQLKLQEGLQSLPQLKERLNELIQLLVTITTEISEL 915
Query: 933 GRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG 992
K+ P++ +L A E + LK+ +KKL++ +K Y ++++R+ E +Y K
Sbjct: 916 KAKIQPLKQKLRAAIDEKERLKEAERKKLSQLNSKYNSYKSTDQDIQRLHKEAQDYAKLD 975
Query: 993 TLTQLAALRESVQKLNQRKEDIIAKRG-VCERTIN--EINQSIANQSLEEIDLKNNLTLL 1049
+++ L +S++ ++ + + ++ + +T+ +N NQ E DLK+N L
Sbjct: 976 LKNEISTLEDSIRATKEQLKQLASEEAEIKSKTVQLESVNTECLNQQTVERDLKDNRELK 1035
Query: 1050 EKKEAVAKL-----NEELKLSEIMI-------SDLTKYHH--TLENCVIKYHSQKMRS-I 1094
+ ++ +L N KL + + +DLTK T+ + ++RS +
Sbjct: 1036 QLQDNETELRKTCENLAKKLGNLDLRNVSREKTDLTKRREAGTVRKGELLGQLGEIRSQV 1095
Query: 1095 NRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
RL RE + Y++ ++ I DL + LE +I++H++KM INR
Sbjct: 1096 ERLQREIDEPRFREAVKNFRKGNYEMVVTRHSIDDLAQLRFALEWALIQFHAEKMEKINR 1155
Query: 1143 LIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQ 1199
LIREYW IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR RCSAGQ
Sbjct: 1156 LIREYWRMIYRGNDIDYIQVKTDEVNTDASADRRKTYNYRVVQSKNNTEIEMRGRCSAGQ 1215
Query: 1200 RVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCG 1259
RVLA LIIR+ +++ + V+ DE T +DR + + C
Sbjct: 1216 RVLASLIIRMALAETFSSNCGVLALDEP----TTNLDRINITSL--------------CD 1257
Query: 1260 IFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
N ++ Q NF LI+ITHDE FI +L I
Sbjct: 1258 AL-------NCIVEERQTQSNFMLIIITHDENFISSLGKI 1290
>gi|195426264|ref|XP_002061260.1| GK20820 [Drosophila willistoni]
gi|194157345|gb|EDW72246.1| GK20820 [Drosophila willistoni]
Length = 1320
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 386/1383 (27%), Positives = 665/1383 (48%), Gaps = 159/1383 (11%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I GIR+F A+ + + F P+TLI+G+NGCGKTTIIEC+K ALT E+P G
Sbjct: 1 MSSIEKLSIQGIRSFGSNAEDRQEITFSSPVTLILGQNGCGKTTIIECLKHALTGEFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GKNFV HDP+I +E+ VK+Q + + V R+
Sbjct: 61 SDKGKNFV--------------------HDPKIFGLNESLGQVKIQVRDKRGAQISVCRT 100
Query: 119 LLLSNKNGKDNCATRDTTIS--RKIFATGVQKNLGCLQQESV---LEMCNLIGVSKAILN 173
+ ++ KNGK + D+T++ + NL L +V + + + +GVS+AI+N
Sbjct: 101 MKVAYKNGKPSFGKMDSTVNFLSGAPGSSSSGNLDSLSGRTVDINVTISDFMGVSEAIIN 160
Query: 174 NVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQA 233
NV+ CHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R + + ++A +
Sbjct: 161 NVLLCHQEDSSWPLDEAKKLKEKFDAIFGITEYNKALDKIIKMRKEAKDALKVMEAGMKH 220
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQSFEEL----HNIEESMKPINEKLVQLTEKERNMSVM 289
K+E ++K N QK ++ E++ E+ MKP++E+L+++ R +
Sbjct: 221 IAYLKQEMEAKSL----NLQKAEEKCEDIKSQCQKCEDDMKPVDERLLEI----RKIEFE 272
Query: 290 STQYQTKKTERDMIQESC----NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELEN 345
+YQ ++ E + ++C N + IK LF G AEL ++ N D++ SE++
Sbjct: 273 VGKYQAQQVEMETKHKNCKEQINTISKKIKTLFEGSLAELDLEIR----NFDQRMSEIKY 328
Query: 346 Q----ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCL 401
Q E S+ Q E + + K ++ +++ + L +L +L+ L +
Sbjct: 329 QRSDFEEQLSKLTQSEGDLQKALTSQEKKRLLAQQQQQSEQTCKAELVKRLKDLSQQLLI 388
Query: 402 DTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELE 461
PE+ L++ + + +I + +Q +I+ L +E + E
Sbjct: 389 PIEGDLSKQPEKLSELLEDIEGVLLGKQCEIAEESDRNDKADQGRQLKIDELRIELSKSE 448
Query: 462 SKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQL 521
+I + ++Q ++K+ ++ +I ++ S L++L+ ++ + ++ S++ + +
Sbjct: 449 QQITAQEKQKVVSEKESGSLEVKIKQIETSMHQLKLLEKQITEADEVYERTSRNFNQEAC 508
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHD 581
+ I E ++ +D +++ L + + +AEI + E K +I ++ RH
Sbjct: 509 RQVIADKKSSIAEKQERFKKLDKQLTFLSSMSKLMAEINLKEKDLEKKTQEIQRVRNRHS 568
Query: 582 RAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRD 641
F F N++ SL + S+ +I + E NA++ + E N +
Sbjct: 569 ENFSKFFKEPITNNYRRSLQNSYDSLRREIRELNEKANAQKLKEQSCEIKRKNIMSDISR 628
Query: 642 QKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENE 701
++ L E + + S P+E+ L+R + + Q E +TS + ++ YI K+ E E
Sbjct: 629 MEKELKEAEELIYQKCHSTPYEELLERSKANISKLQFEHGALTSAEAMYKKYIQKITE-E 687
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPE--QTNNKKTHIDQLCKQQRSLQELKPVY 759
P CPLC D L +L +I+++PE + +K +QL + +L +++P
Sbjct: 688 PCCPLCHHNMSGD-EASDLSYELTDEIEKLPENIERASKALKAEQL--KYENLLQIRPSI 744
Query: 760 ENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLD 819
+ +L+ T IP + +L ++EE + ++ E + + + P + A S+ GD++LLD
Sbjct: 745 TKVTELKKT-IPEKKEELHKIEELLGDSVSEYETMMALIAEPTQNMELANSMLGDMSLLD 803
Query: 820 QNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNS 879
+ ++E ++RELE+ +SK+ + V ++ + ++ E EL+T R +ES Q
Sbjct: 804 EALKESVRVKRELEQAKSKLPDNYDSSVSMEALQNEKSEVSKELDTERKTLESSQHNFEQ 863
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
E L L++ KN + KQ+ +Q G L L+DR EL TE+ EL K+ P+
Sbjct: 864 QMEALNRLREVKNALKDKQIKLQEGVQSLPQLKDRLDELTRQLVAITTEISELKSKIQPL 923
Query: 940 ETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA 999
+ +L + E LK++ + KLN+ +K+ Y ++++R+ E L+Y K L A
Sbjct: 924 KQKLASSIQEKSRLKEQDRAKLNQLTSKLNSYKSADQDIQRLNTEALDYAK---LDIANA 980
Query: 1000 LRESVQKLNQRKEDIIAKRGVCE---RTINEINQSIANQSLEEIDLKNNLTLLEKKEAVA 1056
+++ +N KED+ + + + I ANQ E DL++N L + +E
Sbjct: 981 IKKHDSSINAMKEDLTKLDSEIKGKTKELEAIKMKCANQQTVERDLRDNRELKQLQEKEV 1040
Query: 1057 KLNEELK-----LSEIMISDLTKYHHTLEN----------------CVIKYHSQKM-RSI 1094
KL+E K L + ++K L I QK+ R I
Sbjct: 1041 KLSENCKDLNRQLGNLDFGGVSKEKQELAKQRDAATVRKGELLGQLGEINSQVQKLQREI 1100
Query: 1095 NRL-----IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
N ++ Y ++L ++ I DL ++ LE +I++HS+KM INRLIREYW
Sbjct: 1101 NEPKYKESLKNYRKANFELHVTRRSIEDLGQHRLALEWALIQFHSEKMEKINRLIREYWR 1160
Query: 1150 RIYQGNDIDYISI------------AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSA 1197
+Y+GNDIDYI + + T +++R++YNYRV+Q KN E +MR RCSA
Sbjct: 1161 MVYRGNDIDYIEVKTEDDKSKGIEDGKNKDTLADRRKSYNYRVIQSKNNNEIEMRGRCSA 1220
Query: 1198 GQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRN 1257
GQRVLA LIIR+ ++ E F N +
Sbjct: 1221 GQRVLASLIIRMALA-------------ETFSSNCAVL---------------------- 1245
Query: 1258 CGIFALDEPTTNLD--------------IKNASDQKNFQLIVITHDEEFIEN---LTAID 1300
ALDEPTTNLD + NF LI+ITHDE FI + L+
Sbjct: 1246 ----ALDEPTTNLDRVNIISLCDALNRIVDERESHANFMLIIITHDENFISSMGKLSTYH 1301
Query: 1301 RAY 1303
R Y
Sbjct: 1302 RVY 1304
>gi|357603405|gb|EHJ63748.1| putative RAD50-like protein [Danaus plexippus]
Length = 1257
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 365/1350 (27%), Positives = 679/1350 (50%), Gaps = 132/1350 (9%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
MA + L + GIR+F D+ R+ F++PLTLI+G+NGCGKTTIIEC+++A+T + P
Sbjct: 1 MAGIKSLAVRGIRSFGPEECDEQRIT-FEKPLTLILGQNGCGKTTIIECLRYAITGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G S + FVHD ++ + E A VKL+ + + V R
Sbjct: 60 G---------------------SRYECFVHDTKVNRSVEVMAQVKLKIVNAKDKLLEVSR 98
Query: 118 SL-LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
S+ + + KN K T D+ +S +G K++ + M +GVSKAILN+VI
Sbjct: 99 SMKVTAVKNKKPKFQTLDSFLSVD-DGSGKTKDISSRCADLDFVMHEELGVSKAILNSVI 157
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQE+SSWPLDEGKKVKE FDEIFDA KY+ + ++ R EI +
Sbjct: 158 FCHQEDSSWPLDEGKKVKERFDEIFDADKYSDCFDRLRKIRKEYEHEIKSLGQQVSYWTE 217
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
K++ D KK + N + ++ E++ + ++PI+EKL + ++N+ + +
Sbjct: 218 KKEDLDKKKLDLVNTKTRMSEAEEKILELSTELRPISEKLNAIETLQKNLVSFESAREKI 277
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
K + Q+S EL SI +L+ G EL + + ++ K +EL+ + + +E
Sbjct: 278 KNRLEHQQDSVKELMKSIDKLYEGTTEELHERYTNYGATIEAKHTELDKSYKQNFSFNKE 337
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
E++ ++K KL E +++ D + NN+ LDT
Sbjct: 338 EERIANEKTNNEVKFNKLILLESQNQEKID----RRNNMV----LDTAK----------- 378
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L+D+++ ++ +D E + A ++EK IK +++E +K
Sbjct: 379 ------------LADVEV-QKIETDGE---ADQCKAAVMEK------IKDLMRKLEQHKL 416
Query: 477 DLTNVITQINE-VNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNEL 535
D + + V+ S+ L + K++ +EI + K + ++ I N+
Sbjct: 417 DADKAEKEYQKHVDDSRDALSRHKQKISNKETEIQTVKKEI------MKMGQQITDANKS 470
Query: 536 EDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ L +DA++ A++ L E ++ + K +N+LK +H A L + E N
Sbjct: 471 KQRLEKLDAKLKT--AEDTILKEKDMIEESLKQKEKQLNVLKNKHRSAITELLGKMIENN 528
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
F S+++ ++ I+++I+ K+ + +E + + ++ LR+++ L+ DRM
Sbjct: 529 FAISINQFECQTRTELETIKKNISEKQNEITRVETDRDHINRQLRERREELSAAEDRMYR 588
Query: 656 VLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDY 715
G++ +++ L ++T + + Q+E +++ S+ ++ Y G++++N CPLC+R F+++
Sbjct: 589 ECGAQTYDNTLAKITATVDKLQDEQNVLQSSMFIITKYKGQIKDNNC-CPLCSRGFDNED 647
Query: 716 SVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRS 775
V L+++L T++ +P + + + ++ +L ++ + E I+ L++ DIP L
Sbjct: 648 EVNDLISQLTTQVMNVPAKLEKVTEELQRTSAKKDNLLSMRSLNERIVVLKEKDIPDLEK 707
Query: 776 KLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQ 835
+L+E ++ + + L + P+ K T +QGD+ LLD+ E+ + +++LE
Sbjct: 708 RLVEADKVIASLTESVDDLTMLSKEPEQKMSTLRQIQGDMPLLDKFTNEIRSSKKDLESV 767
Query: 836 ESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIH 895
++K + + LD +Q + + ++ ++KI+S QT+LN H +K+Q ++KN +
Sbjct: 768 KAKCADF-ECDISLDTATVKQTDLRQKIGILKTKIKSNQTKLNEHTKKIQKQAEEKNKLK 826
Query: 896 SKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKK 955
+ L +Q L +L++ ++E Y TEL+EL +E +L + +
Sbjct: 827 EELLNIQKMVQELYNLQETLKQMESNKEKYSTELKELENSTEKLEMELKEKEKAKNNAVT 886
Query: 956 EHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDII 1015
+++ ++ E + + +++K I EI + R ++ ++E+ +LN R + II
Sbjct: 887 KNRHEIQEASTYLTRVSNAFDKIKAIDSEIKQHKDRNIQKEMDQIKEANDRLNCRHKQII 946
Query: 1016 AKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL-----KLSEI--- 1067
R + I+ + IA Q + + L++N+ L + + + N+EL KL +
Sbjct: 947 NDRDTLTKKIDSLKDEIAKQEIYKRTLEDNIKLRKAETEIESCNKELLEINDKLKGVNTD 1006
Query: 1068 MISDL--------------TKYHHTLENCVIKYHSQKM---RSINRLI-REYWTRIYQLK 1109
MIS+ + LE Y ++ ++ N+ + ++Y ++Y+L
Sbjct: 1007 MISEKEPLIMKQTKIFREKAQTEGQLEELKKVYKQNQLELKKAQNQEVEKKYKEKLYELH 1066
Query: 1110 LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTG 1169
+++ + +D+ Y L+ C++++H +KM +IN +IRE W +IY+GNDIDYI I +
Sbjct: 1067 VTKAIDADIRDYSIALDKCLMEFHKEKMENINLIIRELWRKIYRGNDIDYIEIKTEGSMS 1126
Query: 1170 SE-KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEF 1228
+E +RR Y+YRVVQ KNG+E DMR RCSAGQ+VLACLIIRL +++ + + ++ DE
Sbjct: 1127 AESERRKYDYRVVQCKNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEP- 1185
Query: 1229 IENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITH 1288
T +D+ VV + AL + ++ Q+NF I+ITH
Sbjct: 1186 ---TTNLDQENVVSLC---SALGDI------------------VQERMSQRNFMFIIITH 1221
Query: 1289 DEEFIENLTAIDRA-YVVRIVRDHKGLSDI 1317
D EFI+ L ID+ + + R+ +G S +
Sbjct: 1222 DREFIDTLGNIDKVTHYYEVSRNEEGKSRV 1251
>gi|350401885|ref|XP_003486295.1| PREDICTED: DNA repair protein RAD50-like [Bombus impatiens]
Length = 1387
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 373/1372 (27%), Positives = 687/1372 (50%), Gaps = 157/1372 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRV-VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L I GIRNF + +RF RPLTLI+G NG GKTTIIE +KFA E+P G+
Sbjct: 1 MSRIRRLSIRGIRNFGDLNDEAKIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK F F+HDP + +VK + + + R++
Sbjct: 61 DRGK-F-------------------FIHDPTLSAAPSIRGVVKAEIIDAAGNMYIICRTI 100
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLG----CLQQESVLEMCNLIGVSKAILNNV 175
+ N T D +SR G K + C ++ L + +GVSK IL+ V
Sbjct: 101 ESTKGNVSVKFKTLDNALSR--IMKGQNKPVSISNKCANVDAELTLA--MGVSKPILDYV 156
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKE--IPEIKAHYQ 232
IFCHQE+ +WP +GKK+KE FDEIFD+ ++NKALE+I K +D +K + E K + Q
Sbjct: 157 IFCHQEDLNWPFQDGKKLKEKFDEIFDSARFNKALENIMKYIKDMNQKMHILKEQKQNCQ 216
Query: 233 ATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
+N E K+ +N ++ + S ++ ++ ++P+ +K+ + + + + +
Sbjct: 217 LIVN---EVVDKEAKFEDNKKRLEDSKAKIEEFDKELEPVQQKIKIFEKLDADYKNLQNE 273
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQ 352
+ KK E DM ++ N LE ++ +F G K EL ++ L + ++E E+
Sbjct: 274 EKRKKAEYDMFKQQLNRLEEDLQYVFEGTKEELLKQIESHDEELIRQTDKIEELEKRLKN 333
Query: 353 YIQEEKQSHTHINEAQMKLGKLE---RDEET-----HKKLNDTLKT-KLNNL-ADTLCLD 402
+E + ++ ++ G L +D+E + LN+ L + L+N+ A+ L+
Sbjct: 334 IAGKESSISSDLSNERVSNGSLRQQIKDQERKVNLRNAILNEILSSWNLDNIDANVSELE 393
Query: 403 TTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELES 462
A + E+ E L ++ + K L+R + EN I++L + ++ES
Sbjct: 394 IMALTSRLTEKMEEL---------RHCVEQKRLKR--EEEENALHRAIDSLRSKHSKVES 442
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+ + ++ K+++ + I ++ + S L ++ ++ V ++ +L++++D + +K
Sbjct: 443 EKNLKESEVTQTKEEINKIKLDIVQLGAAASKLSSIELRIQEVQKKVQELNEAMDVNVVK 502
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
E+ I+ RNE+E L +D EI++L Q++ AE+ K+ +K +I LK + ++
Sbjct: 503 KEVANKIKIRNEMETLLNTVDEEITLLSKQSMQQAELDLHKSTLHAKEKEIEELKNKREK 562
Query: 583 AFHLLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLR 640
LFD+ + + K +LD + ++ I ++I A+E+ + TLE +S+ L+
Sbjct: 563 EIMTLFDIKELSQTKLKTNLDVVQKQLANEMESINQEIQAEERRITTLETTISHIEHELQ 622
Query: 641 DQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEEN 700
++KR + +++ V K F++ L + ++K Q++ M + Y+ +L E
Sbjct: 623 NKKREINSDKEKVSSVCHYKSFDETLLLQSKKVKDLQDKRGMYAHQSVAYKEYMKQLRET 682
Query: 701 EPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYE 760
P CPLC R F+ +V L+ +++++++ P + + + ++ + +LKPV E
Sbjct: 683 NPSCPLCHRDFDERENVVTLLKEMESEMENHPNRLKECERELKTQQEKYDKMLQLKPVVE 742
Query: 761 NIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQ 820
I++L+++D+ L + L + + + ++ + L+T PK K + GD+ L D
Sbjct: 743 KIIQLEESDLEKLMNSLEKSKNKLSISRTTVMGLETKKSCPKKKLAICKDIVGDIMLWDT 802
Query: 821 NIRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLN 878
I ++ L++ ++ + ++ +G++ T L++ +Q++E K L R IE Q+++N
Sbjct: 803 YIDDIFKLKQTIDNLQIRMTAAGIK-TKRSLEEAQSQREELKMSLKNIRDNIEELQSKIN 861
Query: 879 SHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELE------EL 932
HNEKL + ++++N + +QL +Q +K L+ E ++++Y E+ L
Sbjct: 862 MHNEKLNNARQEQNTLQEEQLRIQSDIQKVKELK------EKLETLYSKEISLWKSINML 915
Query: 933 GRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG 992
++VA ET+LN +L+ +K++ KL + + D ++L E++RI+ E+
Sbjct: 916 KKQVAIAETELNSELEKLEEKRKDNSAKLECDRKLVTDAVRRLSELQRIQDEVDISIYSN 975
Query: 993 TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKK 1052
L + + ++ + +++ ++ E TIN++ +++ Q + + +L +NL LL+ +
Sbjct: 976 VPESLESSEKKIKDYEKLLNELLCEKSDIETTINKLKENVTRQEVRKRELSDNLALLQVQ 1035
Query: 1053 EAVAKLNEEL-----KLSEI----MISD-----------------LTKYHHTLENCVIKY 1086
E + L ++ KL+ I +++D + LE + +Y
Sbjct: 1036 ETIKNLQQQYLRIKEKLNAINHSQVLNDWKNVQSREQTILRQQNIIKGNQEELERTLQQY 1095
Query: 1087 HSQKMRSINRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1145
+ + I R R+ Y ++ +L + E I +L Y L+ +I+YH ++M ++NR+I+
Sbjct: 1096 TQELKKDIYRQARKNYKSKCIELTVIEEAILNLKAYSKALDVAMIQYHEERMATVNRIIK 1155
Query: 1146 EYWTRIYQGNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLA 1203
+ W +Y G D I I D G GS RRTYNY++VQ K+G E DM+ RCSAGQ+VLA
Sbjct: 1156 QMWKLVYTGKDTTSIEIHTDATEGIGS-TRRTYNYKLVQMKHGHEIDMKGRCSAGQKVLA 1214
Query: 1204 CLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL 1263
+IIRL ALAETF ++CGI AL
Sbjct: 1215 SIIIRL---------------------------------------ALAETFCKDCGILAL 1235
Query: 1264 DEPTTNLDIKNASD---------------QKNFQLIVITHDEEFIENLTAID 1300
DEPTTNLD +NA QKNFQLIVI+HDE+F+ L ++
Sbjct: 1236 DEPTTNLDQENADSLAEALATVVKLRSQHQKNFQLIVISHDEKFLFKLAELN 1287
>gi|332026926|gb|EGI67027.1| DNA repair protein RAD50 [Acromyrmex echinatior]
Length = 1520
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 371/1400 (26%), Positives = 703/1400 (50%), Gaps = 159/1400 (11%)
Query: 1 MALLDQLHIMGIRNFPAD-KNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L + GIRNF D ++ ++RF PLTLI+G NG GKTTIIE +K+A T E+P G+
Sbjct: 1 MSKVRKLALRGIRNFGDDSEDAIIRFSCPLTLILGPNGTGKTTIIEALKYATTGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK+F+H DP + ++K + +N T VV
Sbjct: 61 DKGKSFIH--------------------DPMLATTGSVRGVIKAEV-IDNMGTSYVVSRT 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCN--------LIGVSKAI 171
+ S+K K T D+T+++ T K Q++S+ C +GVS++I
Sbjct: 100 IESSKGEKKKFKTLDSTVTK----TSKDKK----QKDSITNKCANVDAEIGIALGVSRSI 151
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
LN VIFCHQ+ +WP D+GK +KE FDEIFD+ ++NKALE+I + L+ +I + A
Sbjct: 152 LNYVIFCHQDELNWPFDQGKLLKERFDEIFDSARFNKALETISKLQKELQSDIRTLNAEK 211
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ E K+ + ++ D + E++++I++ ++P+ +KL ++ + + T
Sbjct: 212 ETYKVLVSEVQDKETKLKEQKKRLDTTKEKMNDIDKQLEPVKQKLEEIQKFHSEYKNIQT 271
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQERLK 350
+ + KK E DM ++ +L+ SI+ ++ G EL + + + L EK E+ EN+ +K
Sbjct: 272 EEEKKKMEFDMHKDRYEKLKKSIRNIYEGTTEELNALIESYDTILTEKNVEIAENEAEIK 331
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+E + S+ + +G L++ + +++ LN+ DT +S +
Sbjct: 332 DISRKETRISNILATRRET-VGTLKQQVKDNERRVIRRNQLLNDALQAWNFDT-VESDVS 389
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDN-------ENTKQAEINALIVEKVELESK 463
E + L K + ++ LE+ +N E Q E++ L ++ES+
Sbjct: 390 EIEVKALTK-------RLEEKMRALEKQVEENRLDMQREEKELQREVDMLRSNYSKIESE 442
Query: 464 IKSFKQQIEGNKKDLTNVI-TQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
K K++ + +D ++I +I ++ + + L+ ++ + +ID+L +++ D L+
Sbjct: 443 -KILKEKEITDIRDEIDIIRNEITQIGAAGNKLKSIEQERKTEKQKIDELVNAVNVDSLE 501
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
E ++ ++++E L ID EI L + +AE++ K+ ++K ++ LK +H
Sbjct: 502 VEKANKVKSKHKIEASLSSIDDEIFSLHKLSSLMAELEIRKSALQAKEEELKNLKRKHGD 561
Query: 583 AFHLLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLR 640
+ +L ++ + + K++L++ + + N + +I A+E+ E V + ++
Sbjct: 562 SIKVLLNIQELEQTKLKDTLERVHQKLEKETNSLTREIQAQERKTTAFETTVRHIESDIK 621
Query: 641 DQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEEN 700
+ L +++ V K F++ L + +K Q++ + + Y+ KL
Sbjct: 622 KKTIELHNNKEKISAVCDYKEFDETLLMQSTIVKDLQDKRGIYAYQATAYKEYVKKLSVK 681
Query: 701 EPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR---SLQELKP 757
P CPLC R FE +V L+ ++++ I I Q K+ +L QQ ++ +LKP
Sbjct: 682 NPCCPLCHRNFEKQNNVTDLIKEIESDI--IHNQPGRLKSCEQELKIQQEKYDNMLQLKP 739
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTL 817
+ E +++ ++ D+ L KL + + NV ++K +K L+ + P+ K ++ GD+
Sbjct: 740 IIEKVIQCEENDLKILEEKLKKTQNNVAQSKMAVKNLEASKTEPEKKLLLYKNMIGDIKF 799
Query: 818 LDQNIRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQT 875
D+ I E+ L+ + E+++ SG++ T +++ AQ++ + L + I++ Q
Sbjct: 800 WDRCIDEIQQLKGAVNNLETQMANSGIK-TERTMEEAQAQREFLRKSLRETCNHIDALQL 858
Query: 876 RLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRK 935
+L HNEKLQ+ + + N++H K+L +Q LK L+D++ +L + +E+L +
Sbjct: 859 KLTKHNEKLQNARAKYNELHEKELKIQSDMQKLKHLKDKQGDLYTREITVGETVEKLQKD 918
Query: 936 VAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLT 995
+ E++L+ +L+ K ++ +K + + + ++L ++ +I EI ++ L
Sbjct: 919 LTHAESELDSRSQQLEKTKVKNWQKQEADRKSMSESARRLSDLHKILDEINSFISSNVLE 978
Query: 996 QLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAV 1055
+LA+ ++ N +++ K+ E+T++++ + IA+Q + + +L +N++L + KE +
Sbjct: 979 KLASYEREIETYNNSLTELMNKKNDVEQTVSKLKEDIASQEIGKRELLDNMSLRKIKETL 1038
Query: 1056 AKLNEELK-----LSEIMISDLTKYHHTLENC--------------------VIKYHSQK 1090
L E+ K L + ++ K LEN +IK ++Q+
Sbjct: 1039 ETLKEQYKKLNEKLKNMDYKEMMKKWEQLENDKQALLRQRNVALGTQEELERIIKQYTQE 1098
Query: 1091 MRSIN-RLIREYWT-RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+R RL R +T + +L + E I++L Y+ L+ +I+YH ++M ++N+++++ W
Sbjct: 1099 LRKEEYRLARRNYTNKCIELTVQEDTIANLKAYNKILDKAMIEYHEERMLTVNKIMKKLW 1158
Query: 1149 TRIYQGNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLI 1206
+Y+G D I I + G GS RR+YNY+++Q K+G + DM+ RCSAGQ+VLA +I
Sbjct: 1159 KHVYKGTDTSSIEICTEPTDGVGS-NRRSYNYKLIQTKHGCKMDMKGRCSAGQKVLASII 1217
Query: 1207 IRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEP 1266
IRL ALAETF +NCGI ALDEP
Sbjct: 1218 IRL---------------------------------------ALAETFCKNCGILALDEP 1238
Query: 1267 TTNLDIKNASD---------------QKNFQLIVITHDEEFIENLTAI-DRAYVVRIVRD 1310
TTNLD NA+ QKNFQLI+I+HDE+F++ L + + + R
Sbjct: 1239 TTNLDEDNANSLADMLTKVVELRSKYQKNFQLIIISHDEKFLQKLADLNNHKQFHELYRK 1298
Query: 1311 HKGLSDI-------HLRSLL 1323
H G++ + H+ SLL
Sbjct: 1299 HNGMTTVKISDFNEHMGSLL 1318
>gi|297675945|ref|XP_002815909.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pongo abelii]
gi|395736144|ref|XP_003776707.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Pongo abelii]
Length = 1312
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 375/1369 (27%), Positives = 701/1369 (51%), Gaps = 131/1369 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTMMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL--------- 1048
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 979 -ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1049 -----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+ + + + NE KL E + D K +H L K + +++ +
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHNLALGRQKGYEEEIIHFKKE 1091
Query: 1098 IREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1092 LREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLW 1151
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA L
Sbjct: 1152 RSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASL 1211
Query: 1206 IIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDE 1265
IIRL +++ +I DE T +DR + + AL E
Sbjct: 1212 IIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI------------ 1252
Query: 1266 PTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 ------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|395504380|ref|XP_003756530.1| PREDICTED: DNA repair protein RAD50 [Sarcophilus harrisii]
Length = 1312
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 358/1332 (26%), Positives = 682/1332 (51%), Gaps = 132/1332 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ IMG+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIMGVRSFGIEDKDKQVITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FV+DP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVYDPKVAQETDVKAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE++++ R + E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRLVRQNQTGRVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSV---MSTQYQT 295
++A + I + + S E + + + + P+ + L E E+N+S + +
Sbjct: 218 EKACEIRDQIVSKEAQLASSKEFVKSYDNELGPLK---IHLKEIEQNLSKIVRLDNDIKA 274
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
++ + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDMYHNHQRTVREKERRLIDCQRELDRTNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E K + +E ++ G+L+ + H++ + + +LA L LD ++ + + +
Sbjct: 335 ESKLLNHEKSELLVEQGRLQLQADRHQQNIRARDSLIQSLATHLELDGFERAPFNERQIK 394
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
K+ + ++ + + F+ E+ KQ +I+ + +K LE +I K +I+ K
Sbjct: 395 NFQKLVKDIEERETEANRRMMNDFAGKESMKQKQIDEIRDKKTGLE-RIVELKLEIQSKK 453
Query: 476 K-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+ +L NV ++ E+ S + L +L + + + ++ + LK E+ +R++ +
Sbjct: 454 QTELKNVKYELQELEGSSDRILELDQELGKTELALGKAEENSNVAALKEELPTLLREKGD 513
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ L +D E+ L +T +++ L K K I +K RH+ L P
Sbjct: 514 LDRSLRKLDQEMEQLNHHTMTRTQMEMLTRDKADKDEQIRKIKSRHNDELTSLLGYFPN- 572
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L++ D++
Sbjct: 573 --KKQLEDWLHSKSKEINQTRDRLAKFNKELASAEQNKNHINNELKQKEEQLSKYEDKLF 630
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ FE +LD++ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F++
Sbjct: 631 DVCGSQDFESDLDKLMDEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQT 690
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + +++ L++K++ P++ + ++ + + K++ + LKP+ +NI+ L++ +IP L
Sbjct: 691 EAELQDVISDLQSKLRLAPDKLKSTESELKRREKRRDEMMGLKPIRQNIIDLKEREIPEL 750
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R+KL + ++ KGE+++ +T L T +E++A + D+T++++ EL ++R++
Sbjct: 751 RNKLQNVNRDIQHLKGEIEEQETLLGTIIPEEESAKACLTDVTIMERLQMELRDVERKIA 810
Query: 834 RQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK 889
+Q +K+ GVDLD QV +++EK++ L+T SKIE + + E++Q L+
Sbjct: 811 QQAAKLQ-----GVDLDRTVQQVNQEKQEKQHRLDTVSSKIELNRKLIQDQQEQIQHLKS 865
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE 949
N++ S++L + + LE++ EL E+++ ++ P+E L Q E
Sbjct: 866 TVNELKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIKDSKEQLYPLEATLGKLQQE 925
Query: 950 LDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG----TLTQLAALRESVQ 1005
+ L K+ ++ K+ D ++++ + +I NY + G + A L + +
Sbjct: 926 KEELIKKKNTSISAVQEKLNDIKEKVKNISSYMKDIENYIQDGKDNYKMQNEAELNKVIS 985
Query: 1006 KLN--QRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEA--------- 1054
+LN ++++D I+K + + Q I Q ++E L++NLTL ++ E
Sbjct: 986 QLNECEKQKDKISKE------MGTMRQDIDMQKVQERWLQDNLTLRKRNEELKEVEEERK 1039
Query: 1055 ----------VAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE---- 1100
V +L E + E I L K +H+L K + +++ R +RE
Sbjct: 1040 QHLKEMGQMQVLQLKNEYQALEEKIETL-KRNHSLALGRQKGYEEEIIHFKRELREPQFS 1098
Query: 1101 -----YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGN 1155
Y + ++ +E++ DL Y+ L++ ++K+H KM IN++IR+ W Y+G
Sbjct: 1099 DAEEKYREMMIVMRTTELVNKDLDIYYKALDHAIMKFHGMKMEEINKIIRDLWRSTYRGQ 1158
Query: 1156 DIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI- 1211
DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL +
Sbjct: 1159 DIEYIEIRSDTDENISASDKRRNYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALA 1218
Query: 1212 --------------------------------------SDQKNFQLIVITHDEEFIENLT 1233
S Q+NFQL+VITHDE+F+E L
Sbjct: 1219 ETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLG 1278
Query: 1234 ---AIDRAYVVR 1242
+++ Y +R
Sbjct: 1279 RSEYVEKFYRIR 1290
>gi|195154461|ref|XP_002018140.1| GL17546 [Drosophila persimilis]
gi|194113936|gb|EDW35979.1| GL17546 [Drosophila persimilis]
Length = 1312
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 379/1369 (27%), Positives = 672/1369 (49%), Gaps = 149/1369 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D+L I G+R+F A+ + + F P+TLI+GENGCGKTT+IECIK+ALT E P G
Sbjct: 1 MSSIDKLSIQGVRSFGSNAEDLQSLTFSSPVTLILGENGCGKTTVIECIKYALTGESPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E+ A +K+Q + V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNESLAQIKMQVRDKRGARVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV----QKNLGCLQQESV---LEMCNLIGVSKAI 171
+ + +K GK + T D+TI+ F T ++N L +V L + + +GVSKAI
Sbjct: 101 MKVCSKRGKVSFETMDSTIN---FLTDAGHSKRENQDSLSGRTVDIDLAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R E+ ++A
Sbjct: 158 INNVLFCHQEDSSWPLDEAKKLKEKFDAIFGITEYNKALDKIIKMRKEAMDELKVMEAGM 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +L ++ R++
Sbjct: 218 KHVAYLKQEMEVKTLGLQKAQKKCDSIKAQCSECEEEMKPIESRLQEI----RDIEFEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE 347
++Q +K E D ++C E + IK F G +L +++ N ++ SE+
Sbjct: 274 KHQAQKVEMDTKHKNCKEQISAISRKIKTHFEGSLVDLDLEID----NFHQRMSEM---- 325
Query: 348 RLKSQYIQEE----KQSHTHINEAQMKLGK----LERDEETHKKLNDTLKTKLNNLADTL 399
RLK +E+ K+SH ++ Q K ++ ++ + L ++ +L L
Sbjct: 326 RLKRSETEEQLSKLKKSHGETHQTQTAQDKKCCLAKQRHQSEQACKTQLVKRVKDLCHEL 385
Query: 400 CLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVE 459
+ PE+ L++ + I +I + + + +Q +I+ L ++ +
Sbjct: 386 QIPIPGDLMAEPEKLVDLLQDIEGVILSKHCEITEVSEHNDNADKARQVKIDELRIDLTK 445
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
E + + ++Q E ++++ + ++ ++ S L++L+ ++ ++ ++ SK+ + +
Sbjct: 446 SEQGVTAQEKQKEASQRESETLKVKVQQIETSMQELKLLEKQIADADAIYERTSKNFNQE 505
Query: 520 QLKNEI---EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL 576
+ I +A I Q+ L +L D +++ L + +AE+ + E K +I+ +
Sbjct: 506 NFREIIAGKKANIAQKQALFKKL---DEKLTFLGSMAKLVAEMNLKEKELEKKNQEIHRV 562
Query: 577 KERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN----V 632
+ RH F F N++ SL A + +I + E NA++ + E +
Sbjct: 563 RSRHSDNFGKFFKEPISNNYRRSLQGAYDKVRREIQDLNEQANAQKLKEQSYEIKRKNLI 622
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
+ +++ ++ K + + S P+++ L+R L + + Q E S + L+
Sbjct: 623 AETARMEKELKEAEELIFQKCR----STPYDELLERSKLAISKLQLEHGAHKSAEALYKK 678
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
YI K+ E EP CPLC D + L +L +I+++P D + + +++L
Sbjct: 679 YIQKINE-EPCCPLCHHNMSGDEAC-DLTTELSDEIQKLP----------DNISRSEKAL 726
Query: 753 QELKPVYENIMKLQDTDI---------PSLRSKLIELEENVIETKGELKKLKTALETPKT 803
+ + YEN++ ++ + + P + +L E+E + ET E + L + P
Sbjct: 727 KAEQLKYENLLHIKPSILKVKELKEILPKKKEELTEVEMLLGETVSEYETLIALIGEPTQ 786
Query: 804 KEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNEL 863
A S+ GD+TLLD+ +++ ++++L++ +SK+ + V +D + A++ + +L
Sbjct: 787 NMDLANSMLGDMTLLDEALKDSVRVKKDLDQLKSKLPASYDSSVSMDALQAEKSQVSKDL 846
Query: 864 NTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDS 923
T R +++S Q H + L L++ KN + KQL +Q G L L++R EL +
Sbjct: 847 ETERKELDSTQHTFEQHVDALNRLREVKNGLKDKQLKLQEGLQSLPQLKERLNELIQLIV 906
Query: 924 VYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKL 983
TE+ EL K+ P++ +L A E + LK+ + KLN+ +K Y ++++R+
Sbjct: 907 TITTEISELKAKIQPLKQKLRAAIDEKERLKEAERIKLNQLNSKYNSYKSTDQDIQRLHK 966
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG-VCERTIN--EINQSIANQSLEEI 1040
E +Y K +++ L +S++ ++ + + ++ + +T+ +N NQ E
Sbjct: 967 EAQDYAKLDLKNEISTLEDSIRATKEQLKQLASEEAEIKSKTLQLESVNTECLNQQTVER 1026
Query: 1041 DLKNNLTLLEKKEAVAKL-----NEELKLSEIMIS-------DLTKYHH--TLENCVIKY 1086
DLK+N L + ++ +L N KL + + DLTK T+ +
Sbjct: 1027 DLKDNRELKQLQDNETELRKTCENLAKKLGNLDLRNVSREKMDLTKRREAGTVRKGELLG 1086
Query: 1087 HSQKMRS-INRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
++RS + RL RE + Y++ ++ I DL + LE +I++H
Sbjct: 1087 QLGEIRSQVERLQREIDEPRFREAVKNFRKGNYEMVVTRHSIDDLAQLRFALEWALIQFH 1146
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQD 1190
++KM INRLIREYW IY+GNDIDYI + D +++R+TYNYRVVQ KN E +
Sbjct: 1147 AEKMEKINRLIREYWRMIYRGNDIDYIQVKTDEVNTDASADRRKTYNYRVVQSKNNTEIE 1206
Query: 1191 MRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKAL 1250
MR RCSAGQRVLA LIIR+ +++ + V+ DE T +DR + +
Sbjct: 1207 MRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEP----TTNLDRINITSL------- 1255
Query: 1251 AETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
C N ++ Q NF LI+ITHDE FI +L I
Sbjct: 1256 -------CDAL-------NCIVEERQTQSNFMLIIITHDENFISSLGKI 1290
>gi|126290113|ref|XP_001366194.1| PREDICTED: DNA repair protein RAD50 [Monodelphis domestica]
Length = 1312
Score = 435 bits (1118), Expect = e-118, Method: Compositional matrix adjust.
Identities = 364/1339 (27%), Positives = 689/1339 (51%), Gaps = 146/1339 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ IMG+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIMGVRSFGIEDKDKQVITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVKAQIRLQFRDVNGEIVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRSVRHDQSVRVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSV---MSTQYQT 295
++A + I + + S E + + E + P+ L E E+N+S + +
Sbjct: 218 EKALEIRDQIVSKEAQLASSKEFVKSYENELGPLK---THLKEIEQNLSKIVRLDNDIKA 274
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
++ + +++ +ELE ++++F G +L + + + EK +L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDMYHNHQRTVREKERKLIDCQRELDRTNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E K + + ++ G+L+ H++ + + LA L LD ++ + + +
Sbjct: 335 ESKLLNHEKSGLLVEQGRLQLQANHHQQNIRARDSLIQALATHLELDGYERAPFNERQIK 394
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
K+ + ++ + + + F+ E+ KQ +I+ + +K LE +I K +I+ K
Sbjct: 395 NFQKLVKEIEEREIETNRRMMNDFAGKESMKQKQIDEIRDKKTGLE-RIIELKLEIQNKK 453
Query: 476 K-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+ +L NV ++ E+ S + L +L + E+ + K+ + LK E+ A +R++ +
Sbjct: 454 QTELKNVKYELQELEGSSDRILELDQELRKTELELGKAEKNSNIGALKEEVPALLREKGD 513
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ L +D E+ L +T +++ L K K I +K RH+ L P
Sbjct: 514 LDRSLRKLDQEMEQLNHHTMTRTQMEMLTRDKADKDEQIRKIKSRHNDELTSLLGYFPN- 572
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L++ D++
Sbjct: 573 --KKQLEDWLHSKSKEINQTRDRLAKFNKELASAEQNKNHINHELKQKEEQLSQYEDKLF 630
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ FE +LD++ E+++ ++ +M+ +++ +I +L +E + CP+C R F++
Sbjct: 631 DVCGSQDFESDLDKLMDEIEKSSKQRAMLAGATAVYSQFITQLTDEKQSCCPVCQRVFQT 690
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + +++ L++K++ P++ + ++ + + K++ + ELKP+ ++I++L++ +IP L
Sbjct: 691 EAELQDVISDLQSKLRLAPDKLKSTESELKRREKRRNEMMELKPMRQSIIELKEREIPEL 750
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R+KL + ++ KGE+++ +T L T +E++A + D+T++++ EL ++R++
Sbjct: 751 RNKLQNVNRDIQHLKGEIEEQETLLGTIIPEEESAKACLTDVTIMERLQMELRDVERKIA 810
Query: 834 RQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK 889
+Q +K+ GVDLD QV +++EK++ L+T SKIE + + E++Q L+
Sbjct: 811 QQAAKLQ-----GVDLDRTVQQVNQEKQEKQHRLDTVSSKIELNRKLIQDQQEQIQHLKS 865
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE 949
N++ S++L + + LE++ EL TE++ L R++ + QL ++
Sbjct: 866 TVNELKSEKLQISSNLQRRQQLEEQTVEL-------STEVQSLHREIKDSKEQLCPLEAT 918
Query: 950 LDALKKEHKKKLNEEGA-------KIQDYTKQLEEVKRIKLEILNYTKRGTLT----QLA 998
L L++E ++ +N++ K+ D ++++ + +I NY + G + + A
Sbjct: 919 LGKLQQEKEELINKKNTSNSAAQEKLNDIKEKVKNISSYMKDIENYIQDGKDSYKTQKEA 978
Query: 999 ALRESVQKLN--QRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEA-- 1054
L + +LN ++++D I+K + + Q I Q ++E L++NLTL ++ E
Sbjct: 979 ELNNVISQLNECEKQKDKISKE------MGTMRQDIDMQKVQERWLQDNLTLRKRNEELK 1032
Query: 1055 -----------------VAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
V +L E + E I L K +H+L K + +++ R
Sbjct: 1033 EVEEERKQHLKEMGQMQVLQLKNEYQTLEEKIETL-KRNHSLALGRQKGYEEEIIHFKRE 1091
Query: 1098 IRE---------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+RE Y + ++ +E++ DL Y+ L++ ++K+HS KM IN++IR+ W
Sbjct: 1092 LREPQFSDAEEKYREMMIVMRTTELVNKDLDIYYKALDHAIMKFHSMKMEEINKIIRDLW 1151
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D T S+KRR YNYRVV K DMR RCSAGQ+VLA L
Sbjct: 1152 RSTYRGQDIEYIEIRSDTDENVTASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASL 1211
Query: 1206 IIRLFI---------------------------------------SDQKNFQLIVITHDE 1226
IIRL + S Q+NFQL+VITHDE
Sbjct: 1212 IIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDE 1271
Query: 1227 EFIENLT---AIDRAYVVR 1242
+F+E L +++ Y +R
Sbjct: 1272 DFVELLGRSEYVEKFYRIR 1290
>gi|380808574|gb|AFE76162.1| DNA repair protein RAD50 [Macaca mulatta]
Length = 1312
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 372/1364 (27%), Positives = 700/1364 (51%), Gaps = 121/1364 (8%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + + L F++ E KQ +I+ + +K L +I K +I K+ +
Sbjct: 398 KLVKERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL-GRIIELKSEILNKKQNE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEKADLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 814 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSITN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q E +
Sbjct: 869 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKE 927
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+ KK K+ ++ K+ D ++++ + +I NY + G +E+ +LN+
Sbjct: 928 EIINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET--ELNK 982
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 983 ----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHSLALGRQKGYEEEIIHFKKELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLA 1216
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
+++ +I DE T +DR + + AL E
Sbjct: 1217 LAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----------------- 1252
Query: 1271 DIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 -IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|114601587|ref|XP_001163412.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pan troglodytes]
gi|397518341|ref|XP_003829350.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Pan paniscus]
gi|410211712|gb|JAA03075.1| RAD50 homolog [Pan troglodytes]
gi|410308950|gb|JAA33075.1| RAD50 homolog [Pan troglodytes]
gi|410342397|gb|JAA40145.1| RAD50 homolog [Pan troglodytes]
Length = 1312
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 373/1367 (27%), Positives = 705/1367 (51%), Gaps = 127/1367 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL ++ E + +
Sbjct: 979 -ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1058 LNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIR 1099
+ EE K + ++ + + H LE + K + +++ + +R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELR 1093
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1094 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+G DI+YI I +D + S+KRR+YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 TYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMLKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPT 1267
RL +++ +I DE T +DR + + AL E
Sbjct: 1214 RLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------------- 1252
Query: 1268 TNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 ----IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|383408891|gb|AFH27659.1| DNA repair protein RAD50 [Macaca mulatta]
Length = 1312
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 372/1364 (27%), Positives = 699/1364 (51%), Gaps = 121/1364 (8%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNDIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + + L F++ E KQ +I+ + +K L +I K +I K+ +
Sbjct: 398 KLVKERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL-GRIIELKSEILNKKQNE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEKADLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 814 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSITN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q E +
Sbjct: 869 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKE 927
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+ KK K+ ++ K+ D ++++ + +I NY + G +E+ +LN+
Sbjct: 928 EIINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET--ELNK 982
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 983 ----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHSLALGRQKGYEEEIIHFKKELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLA 1216
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
+++ +I DE T +DR + + AL E
Sbjct: 1217 LAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----------------- 1252
Query: 1271 DIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 -IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|410265884|gb|JAA20908.1| RAD50 homolog [Pan troglodytes]
Length = 1312
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 373/1367 (27%), Positives = 705/1367 (51%), Gaps = 127/1367 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELIKKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL ++ E + +
Sbjct: 979 -ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1058 LNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIR 1099
+ EE K + ++ + + H LE + K + +++ + +R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELR 1093
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1094 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+G DI+YI I +D + S+KRR+YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 TYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMLKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPT 1267
RL +++ +I DE T +DR + + AL E
Sbjct: 1214 RLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------------- 1252
Query: 1268 TNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 ----IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|19924129|ref|NP_005723.2| DNA repair protein RAD50 [Homo sapiens]
gi|60392986|sp|Q92878.1|RAD50_HUMAN RecName: Full=DNA repair protein RAD50; Short=hRAD50
gi|5739041|gb|AAD50325.1|AF057299_1 RAD50-2 protein [Homo sapiens]
gi|1518806|gb|AAB07119.1| Rad50 [Homo sapiens]
gi|119582733|gb|EAW62329.1| RAD50 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens]
gi|223459632|gb|AAI36437.1| RAD50 homolog (S. cerevisiae) [Homo sapiens]
Length = 1312
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 373/1367 (27%), Positives = 704/1367 (51%), Gaps = 127/1367 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL ++ E + +
Sbjct: 979 -ELNK----VIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1058 LNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIR 1099
+ EE K + ++ + + H LE + K + +++ + +R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELR 1093
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1094 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 TYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPT 1267
RL +++ +I DE T +DR + + AL E
Sbjct: 1214 RLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------------- 1252
Query: 1268 TNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 ----IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|426349897|ref|XP_004042521.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Gorilla gorilla
gorilla]
Length = 1312
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 373/1367 (27%), Positives = 704/1367 (51%), Gaps = 127/1367 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 455 ---SELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL ++ E + +
Sbjct: 979 -ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1058 LNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIR 1099
+ EE K + ++ + + H LE + K + +++ + +R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELR 1093
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1094 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 TYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPT 1267
RL +++ +I DE T +DR + + AL E
Sbjct: 1214 RLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------------- 1252
Query: 1268 TNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 ----IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|355750168|gb|EHH54506.1| hypothetical protein EGM_15366 [Macaca fascicularis]
Length = 1312
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 372/1364 (27%), Positives = 700/1364 (51%), Gaps = 121/1364 (8%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + + L F++ E KQ +I+ + +K L +I K +I K+ +
Sbjct: 398 KLVKERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL-GRIIELKSEILNKKQNE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNRNVETLKMEVISLQNEKADLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKIKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 814 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSITN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q E +
Sbjct: 869 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKE 927
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+ KK K+ ++ K+ D ++++ + +I NY + G +E+ +LN+
Sbjct: 928 EIINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET--ELNK 982
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 983 ----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHSLALGRQKGYEEEIIHFKKELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLA 1216
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
+++ +I DE T +DR + + AL E
Sbjct: 1217 LAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----------------- 1252
Query: 1271 DIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 -IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|326670885|ref|XP_696859.4| PREDICTED: DNA repair protein RAD50 [Danio rerio]
Length = 1312
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 345/1312 (26%), Positives = 652/1312 (49%), Gaps = 115/1312 (8%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K+ + ++P G
Sbjct: 1 MSKIEKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYITSGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDP+ + + A ++LQ N D V V RS
Sbjct: 61 ---------------------SKGNTFVHDPKDAHETDVRAQIRLQFRDVNGDAVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K K T + I+R V + C + + EM + +GVS+A+LN+VIFC
Sbjct: 100 MQCTQKGKKTEFKTLEGVITRIKHGEKVSLSSKCAEIDR--EMISSLGVSRAVLNHVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y K LE+++ R + + + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKVLETLRTLRQKQTNTVKSCQMELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
+A ++L+ + S E ++ IE + P+ +L + + + + +
Sbjct: 218 DKAQEIRELLSTKETQLASSKESVNRIEGQIDPLERRLNDIESSLGKVMKLDNDIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ ELE ++Q+F G +LQ + + EK L +R + +E +
Sbjct: 278 RKKQMEDDNRELEEKMEQVFQGSDDQLQDMYQNHQRTVKEKEKRLVECQRELERAGRECQ 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ + +E ++ G+L+ + + H + T++ LA L L+ ++ + + +
Sbjct: 338 RMNRIKSELLVEQGRLQLEADRHTQNIKKRDTQVKTLASFLELEGYDRTPLSERQLQSFY 397
Query: 419 KMSQTTIDKYLSDIKILERTFSD---NENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
+ + +D+ D + L +T D E KQ I+ L +K LE I+ K+ ++ K
Sbjct: 398 RQIKERLDQ---DSEALNQTMHDMQQKETQKQHNIDDLRDKKTGLERTIE-LKKDLQAKK 453
Query: 476 -KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
++L N+ + + ++ S + LQ L T+L + E+D ++ D LK E+ ++++ +
Sbjct: 454 QQELKNIKSDLQKLEGSSNRLQELDTELQKAERELDNAVQACTVDSLKVEVTELLKEKAQ 513
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ +D E+ +L A++ +K K K + +K RH+ L P
Sbjct: 514 LDQAQRKLDQEMEMLNTHTTARAQMDMMKKTKMDKEEQVRKIKSRHNEELVSLLGHFPN- 572
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L+ + S + +I +E I K L + E S+ + ++ ++ LA+ +R+
Sbjct: 573 --KKELEDWIYSKSREIKSTREQITKMNKELASGEQKKSHYTAEIKRKEEQLAKYEERLF 630
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ F+ +L ++ EL++ ++ +M+ +++ +I +L EE +P CP+C R F S
Sbjct: 631 NVCGSQDFQSDLSKLEDELEKCSKQRAMLAGATAVYSQFISQLTEEGDPCCPVCQRVFPS 690
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + ++N +++K++ +P++ N + + + +++ + LKP+ +++++LQ+ ++P L
Sbjct: 691 EAELQDVINDMQSKLRLVPDKLKNTEHDLKRKERRRDEMMTLKPIRQSLVELQEKELPEL 750
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R++L + ++ + KG++++ +T L T ++E+TA + D++L+D+ +L ++R++
Sbjct: 751 RNQLQRVNRDIEKLKGDIEEQETLLCTLVSEEETAKACLQDISLMDRFQLDLKDVERKIA 810
Query: 834 RQESKISGMRSTGVDLDQVLAQQKEKKNE----LNTFRSKIESGQTRLNSHNEKLQSLQK 889
+ +K+ GVDL + + Q ++K E L+T SKIE + + E++Q+L+
Sbjct: 811 QHAAKLQ-----GVDLSRTMQQVSQEKQETQHRLDTTSSKIELKRKLIQDQQEQIQALRS 865
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE 949
N+I ++L + + LE++ E ++ + + +P+ L Q E
Sbjct: 866 SVNEIRGEKLQISSNMQKRQQLEEQCVEFSTEIQTLHRDIRDAKEQASPLAATLEKLQQE 925
Query: 950 LDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
L + +KK E KI ++++ + + EI Y + G + +Q++++
Sbjct: 926 KQDLVERRRKKQEEGQEKINAIKEKMKNITLFEKEITKYIEEGKDSYKEQKETELQEMDK 985
Query: 1010 RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLE----------KKEAVAK-- 1057
+ + +R + + I Q I Q ++E L++NLTL + K+EA+ K
Sbjct: 986 QLHEAEKQREKTNKDMGNIRQDIDTQKVQERWLQDNLTLRKRVEELKEVSRKREALIKEM 1045
Query: 1058 -------LNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR---IYQ 1107
L E + E + DL K Y + +R L + + R +Y+
Sbjct: 1046 GNMQVLQLRNERREVERKLEDLKKNRSVALGRQKGYEDEILRFRKELNEDQYCRAEDLYR 1105
Query: 1108 -----LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI 1162
++ +E+ DL Y+ L+ ++++HS KM IN++IR+ W Y+G DI+Y+ I
Sbjct: 1106 DKMIVMRTTELANKDLDIYYKALDQTIMRFHSMKMEEINKIIRDLWRSTYRGQDIEYVEI 1165
Query: 1163 AADV---GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------ 1213
+DV + KRRTYNYRVV K DMR RCSAGQ+VLA LIIRL +++
Sbjct: 1166 RSDVDENASAGVKRRTYNYRVVMVKGDAALDMRGRCSAGQKVLASLIIRLALAETFCLNC 1225
Query: 1214 ---------------------------------QKNFQLIVITHDEEFIENL 1232
Q+NFQL+VITHDE+F+E L
Sbjct: 1226 GILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLLVITHDEDFVELL 1277
>gi|332221676|ref|XP_003259989.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Nomascus leucogenys]
Length = 1313
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 375/1370 (27%), Positives = 701/1370 (51%), Gaps = 132/1370 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E ++P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ T + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRTRDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGS-KPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRF 710
+ V G FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R
Sbjct: 629 LFDVCGEFHHFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRV 688
Query: 711 FESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDI 770
F+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +I
Sbjct: 689 FQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEI 748
Query: 771 PSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQR 830
P LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R
Sbjct: 749 PELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVER 808
Query: 831 ELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQS 886
++ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q
Sbjct: 809 KIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQH 863
Query: 887 LQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNL 945
L+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 LKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEK 922
Query: 946 AQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRES 1003
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 FQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET 979
Query: 1004 VQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------- 1048
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 980 --ELNK----VIAQLSECEKHKEKINEDRRIMRQDIDTQKIQERWLQDNLTLRKRNEELK 1033
Query: 1049 ------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1096
+ + + + NE KL E + D K +H L K + +++ +
Sbjct: 1034 EVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHNLALGRQKGYEEEIIHFKK 1091
Query: 1097 LIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREY 1147
+RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+
Sbjct: 1092 ELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDL 1151
Query: 1148 WTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLAC 1204
W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA
Sbjct: 1152 WRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLAS 1211
Query: 1205 LIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALD 1264
LIIRL +++ +I DE T +DR + + AL E
Sbjct: 1212 LIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----------- 1253
Query: 1265 EPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1254 -------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1294
>gi|167045855|gb|ABZ10522.1| RAD50 homolog isoform 1 (predicted) [Callithrix jacchus]
Length = 1312
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 383/1376 (27%), Positives = 706/1376 (51%), Gaps = 145/1376 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MICTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF A +Y KALE+++ R +++ E YQ L Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSAARYIKALETLRQVRQTQGQKVKE----YQMELKYL 213
Query: 239 KEADSKKQLIYNN-TQKRDQ---SFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K I + T K Q S E + + E + P+ +L ++ E N+S +M
Sbjct: 214 KQNKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEI---EHNLSKIMRLDN 270
Query: 294 QTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ K E + +++ +ELE ++++F G +L + + + EK +L + +R
Sbjct: 271 EIKALESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELE 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+ +E + + +E ++ G+L+ + H++ + + +LA L LD + ++
Sbjct: 331 KLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSE 390
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIK 465
+ + K+ + ++ L F++ E KQ +I+ + +K +EL+S+I
Sbjct: 391 RQIKNFHKLVKERQERETKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEIL 450
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
S KQ +L NV ++ ++ S + L +L + E+ + K+ + + LK E+
Sbjct: 451 SKKQN------ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEV 504
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
++ +++ L +D E+ L T +++ L K K I +K RH
Sbjct: 505 INLQNEKADIDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELT 564
Query: 586 LLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRT 645
L P K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++
Sbjct: 565 SLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQ 621
Query: 646 LAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRC 704
L+ D++ V GS+ F+ +LDR+ E+++ ++ +M+ +++ +I +L +EN+ C
Sbjct: 622 LSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCC 681
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
P+C R F+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+
Sbjct: 682 PVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIID 741
Query: 765 LQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
L++ +IP LR+KL + ++ K ++++ +T L T +E++A D+T++++ E
Sbjct: 742 LKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKMCLTDVTIMERFQME 801
Query: 825 LNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSH 880
L ++R++ +Q +K+ G+DLD QV +++EK+++L+T SKIE + +
Sbjct: 802 LKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQ 856
Query: 881 NEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPI 939
E++Q L+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+
Sbjct: 857 QEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPL 915
Query: 940 ETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
ET L Q E + L KK K+ ++ K+ D ++++ + +I NY + G
Sbjct: 916 ETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDY 972
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-- 1048
+E+ +LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 973 KKQKET--ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRK 1026
Query: 1049 ------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK 1090
+ + + + NE KL E + + K +H L K + ++
Sbjct: 1027 RNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--ENIKRNHNLALGRQKGYEEE 1084
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSIN 1141
+ + +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN
Sbjct: 1085 IIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEIN 1144
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAG
Sbjct: 1145 KIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAG 1204
Query: 1199 QRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNC 1258
Q+VLA LIIRL +++ +I DE T +DR + + AL E
Sbjct: 1205 QKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----- 1252
Query: 1259 GIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 -------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|2687853|emb|CAA99729.1| RAD50 homologue hsRAD50 [Homo sapiens]
Length = 1318
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 371/1367 (27%), Positives = 697/1367 (50%), Gaps = 131/1367 (9%)
Query: 3 LLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
+ ++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 9 MFAKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG-- 66
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+ G FVHDP++ ++ + A ++LQ N + + V RS++
Sbjct: 67 -------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMV 107
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+ K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFCHQ
Sbjct: 108 CTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFCHQ 165
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
E+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK++
Sbjct: 166 EDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVEEYQMELKYLKQYKEK 225
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTER 300
A + I + + S E + + E + P+ +L ++ + + + + + +
Sbjct: 226 ACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDSRK 285
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQS 360
+++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 286 KQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESRLL 345
Query: 361 HTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKM 420
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + + K+
Sbjct: 346 NQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKL 405
Query: 421 SQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIEGN 474
+ + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 406 VRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN---- 461
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +
Sbjct: 462 --ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEKAD 519
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 520 LDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN- 578
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L+ L S + +IN+ ++ + K L + E N ++ + L ++ L+ D++
Sbjct: 579 --KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELERKEEQLSSYEDKLF 636
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F++
Sbjct: 637 DVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQT 696
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + ++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP L
Sbjct: 697 EAELQEAISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPMRQSIIDLKEKEIPEL 756
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R++
Sbjct: 757 RNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIA 816
Query: 834 RQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK 889
+Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+
Sbjct: 817 QQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKS 871
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQS 948
N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q
Sbjct: 872 TTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQ 930
Query: 949 ELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQK 1006
E + L KK K+ ++ K+ D ++++ + +I N+ + G + +++ +
Sbjct: 931 EKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENHIQDG---KDDYMKQKETE 985
Query: 1007 LNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL----------- 1048
LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 986 LNK----VIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRNEELKEVE 1041
Query: 1049 ---------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1099
+ + + + +E KL E + D K +H L K + +++ + +R
Sbjct: 1042 EEGKQHLKEMGQMQVLQMKSEHQKLEENI--DNIKRNHNLALGRQKGYEEEIIHFKKELR 1099
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1100 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1159
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1160 TYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLII 1219
Query: 1208 RLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPT 1267
RL +++ +I DE T +DR + + AL E
Sbjct: 1220 RLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------------- 1258
Query: 1268 TNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1259 ----IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1299
>gi|403255929|ref|XP_003920657.1| PREDICTED: DNA repair protein RAD50 [Saimiri boliviensis boliviensis]
Length = 1312
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 378/1376 (27%), Positives = 704/1376 (51%), Gaps = 145/1376 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MICTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E YQ L Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKE----YQMELKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNI----EESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K I + ++ +I E + P+ +L ++ E N+S +M
Sbjct: 214 KQNKEKACEIRDQITSKEAQLTSSKDIVKSYENELDPLKNRLKEI---EHNLSKIMRLDN 270
Query: 294 QTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ K E + +++ +ELE ++++F G +L + + + EK +L + +R
Sbjct: 271 EIKALESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELE 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+ +E + + +E ++ G+L+ + H++ + + +LA L LD ++
Sbjct: 331 KLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFELGPFSE 390
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIK 465
+ + K+ + ++ L F++ E KQ +I+ + +K +EL+S+I
Sbjct: 391 RQIKNFHKLVKERQERETKSANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEIL 450
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
S KQ +L NV ++ ++ S + L +L + ++ + K+ + + LK E+
Sbjct: 451 SKKQN------ELKNVKYELQQLEGSSDRILELDQELIKAERDLSKAEKNSNVETLKMEV 504
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
++ +L+ L +D E+ L T +++ L K K I +K RH
Sbjct: 505 INLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELT 564
Query: 586 LLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRT 645
L P K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++
Sbjct: 565 SLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQ 621
Query: 646 LAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRC 704
L+ D++ V GS+ F+ +LDR+ E+++ ++ +M+ +++ +I +L +EN+ C
Sbjct: 622 LSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCC 681
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
P+C R F+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++++
Sbjct: 682 PVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSVID 741
Query: 765 LQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
L++ +IP LR+KL + ++ K ++++ +T L T +E++A D+T++++ E
Sbjct: 742 LKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKMCLTDVTIMERFQME 801
Query: 825 LNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSH 880
L ++R++ +Q +K+ G+DLD QV +++EK+++L+T SKIE + +
Sbjct: 802 LKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQ 856
Query: 881 NEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPI 939
E++Q L+ N++ S++L + + LE++ EL + S+Y+ E+++ +++P+
Sbjct: 857 QEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQISPL 915
Query: 940 ETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
ET L Q E + L KK K+ ++ K+ D ++++ + +I NY + G
Sbjct: 916 ETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDY 972
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-- 1048
+E+ +LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 973 KKQKET--ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRK 1026
Query: 1049 ------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK 1090
+ + + + NE KL E + + K +H+L K + ++
Sbjct: 1027 RNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--ENIKRNHSLALGRQKGYEEE 1084
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSIN 1141
+ + +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN
Sbjct: 1085 IIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEIN 1144
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAG
Sbjct: 1145 KIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAG 1204
Query: 1199 QRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNC 1258
Q+VLA LIIRL +++ +I DE T +DR + + AL E
Sbjct: 1205 QKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----- 1252
Query: 1259 GIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 -------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>gi|281183185|ref|NP_001162505.1| DNA repair protein RAD50 [Papio anubis]
gi|297295039|ref|XP_001099384.2| PREDICTED: DNA repair protein RAD50-like [Macaca mulatta]
gi|159461525|gb|ABW96800.1| RAD50 homolog, isoform 1 (predicted) [Papio anubis]
Length = 1311
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 370/1364 (27%), Positives = 698/1364 (51%), Gaps = 122/1364 (8%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + + L F++ E KQ +I+ + +K L +I K +I K+ +
Sbjct: 398 KLVKERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL-GRIIELKSEILNKKQNE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEKADLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 814 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSITN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q E +
Sbjct: 869 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKE 927
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+ KK K+ ++ K+ D ++++ + +I NY + G +E+ +LN+
Sbjct: 928 EIINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET--ELNK 982
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 983 ----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHSLALGRQKGYEEEIIHFKKELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+ A LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKA-ASLIIRLA 1215
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
+++ +I DE T +DR + + AL E
Sbjct: 1216 LAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----------------- 1251
Query: 1271 DIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1252 -IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1292
>gi|54792259|emb|CAF18543.1| RAD50 protein [Gallus gallus]
Length = 1250
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 374/1343 (27%), Positives = 675/1343 (50%), Gaps = 171/1343 (12%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MAKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G +FVHDP++ + + A ++LQ + + + V RS
Sbjct: 61 ---------------------TKGNSFVHDPKVANETDVRAQIRLQFRDVSGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISALGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + ++ E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQGTKVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERN-MSVMSTQY 293
K+ K Q I +N R+ S E + +IE + P+ L + E+N M VMS
Sbjct: 214 KQNKEKAQEIQDNLANREAQLSASKENIKSIESQLDPLKSSLAAV---EKNLMEVMSLDN 270
Query: 294 QTKKTERDMIQ--ESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
K E IQ + +L+ ++++F G +L+ + + + + EK L + +R
Sbjct: 271 NVKALESRRIQMEKDNQDLQRKMEKVFQGTDEQLKDRYHNHQRTVKEKEKRLSDCKRELD 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHK---KLNDTLKTKLNNLADTLCLDTTAKSQ 408
+ +E ++ ++ +E ++ G+L+ + H+ K+ D+L + L+ L LD ++
Sbjct: 331 RASKECQRFNSEKSELLIERGRLQLQADRHQEHIKVRDSL---IQALSAQLELDGFEQAP 387
Query: 409 YTPEEGEGLIKMSQTTIDKYLSDIKI---LERTFSDNENTKQAEINALIVEKVELESKIK 465
+ + + + ++ SD + L R F+ E KQ +I+ + K LE I
Sbjct: 388 FNDRQ---IAVFHELLKERQKSDTEAANQLMREFTQKEAMKQEQIDKIRDRKTGLERSI- 443
Query: 466 SFKQQIEGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
K I+ + +L NV ++ ++ S + L ++ ++ E+++ ++ + + L+ E
Sbjct: 444 DLKSDIQNKRLAELKNVKYELCQLEGSSDRIAELDREIVKMEHELEKAERNSNVETLEQE 503
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
++ ++ L+ L +D E+ L T+ +++ LK K K I +K RH
Sbjct: 504 VQTLQNEKINLDKVLRRLDQEMEQLNLHTTTITQMEMLKKDKADKEEQIRKVKLRHFEEL 563
Query: 585 HLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKR 644
LL P K L+ L + +IN + K L + E + S LR ++
Sbjct: 564 TLLLGYFPN---KKQLEDWLHGKSTEINETRSRHALLNKQLASAEQQKNYISAELRKKEE 620
Query: 645 TLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPR 703
L+ ++ V GS+ F+ L+++ E+++ ++ +++ +++ +I +L EEN+
Sbjct: 621 QLSNYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSC 680
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ + LKP+ + ++
Sbjct: 681 CPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKKREKKRDEMIGLKPIRQTVL 740
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIR 823
+LQ+ DIP LR++L + + KGE+++ +T L+T ++++ A + D+TL+++
Sbjct: 741 ELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLLQTVLSEKEGANACLQDITLMERYQT 800
Query: 824 ELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNS 879
++ ++R++ +QE+K+ GVDL+ QV +++ KK+ +T SKIE Q
Sbjct: 801 DIRDVERKIAQQEAKL-----LGVDLNRTVLQVSQEKQAKKHLWDTVTSKIELNQKMKQD 855
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
++Q L+ N++ +++L + + LE++ EL E++E +V P+
Sbjct: 856 QQNQIQELKSTVNELRAEKLQISSSVQRRQQLEEQTVELTTEVQSLSREIKEEKEQVFPL 915
Query: 940 ETQL-NLAQSELD------ALKKEHKKKLNEEGAKIQD---YTKQLEEVKRIKLEILNYT 989
+ L L Q + D A KE ++K+N K++D YTK++E NY
Sbjct: 916 DATLEKLQQDKEDLINKRTASNKEIQEKINAIKEKVKDINKYTKEIE----------NYI 965
Query: 990 KRGTLTQLAALRESVQKLNQRKEDIIAKRGV-CERTINEIN-------QSIANQSLEEID 1041
++G +E +K + + D + + V CE+ +I+ Q I Q ++E
Sbjct: 966 QQG--------KEEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQERW 1017
Query: 1042 LKNNLTLLEK-----------KEAVAKLNE--------ELKLSEIMISDLTKYHHT---- 1078
L++NLTL E+ KE V K+ E E K E I L + HH
Sbjct: 1018 LEDNLTLRERNKELKGVEDNIKELVKKMGEMKVPQLKNEQKHLEEKIEALKRNHHVALGR 1077
Query: 1079 ---LENCVIKYHSQKMRSINRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHS 1134
E ++++ + S + E + + ++ +E++ DL Y+ L+ ++ +HS
Sbjct: 1078 QRGFEEEIVRFKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHS 1137
Query: 1135 QKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDM 1191
KM+ IN++IR+ W Y+G DI+YI I +D + S+KRR+YNYRVV K DM
Sbjct: 1138 MKMQEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDM 1197
Query: 1192 RNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALA 1251
R RCSAGQ+VLA LIIRL ALA
Sbjct: 1198 RGRCSAGQKVLASLIIRL---------------------------------------ALA 1218
Query: 1252 ETFSRNCGIFALDEPTTNLDIKN 1274
ETF NCGI ALDEPTTNLD +N
Sbjct: 1219 ETFCLNCGILALDEPTTNLDREN 1241
>gi|224068135|ref|XP_002188800.1| PREDICTED: DNA repair protein RAD50 [Taeniopygia guttata]
Length = 1312
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 345/1324 (26%), Positives = 667/1324 (50%), Gaps = 139/1324 (10%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK FVHDP++ + + A ++LQ N + V RS
Sbjct: 61 ---------------------TKGKTFVHDPKVANETDVRAQIRLQFRDVNGQVMAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L + K T ++ I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MLCTQKGKTPEFKTLESVITRTKHGEKVSLSSKCAEIDR--EMISALGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + ++ E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALEALRQVRLKQSLKVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K Q I ++ R+ S E + +IE ++P+ L + + + + + +
Sbjct: 214 KQNKEKAQEIQDHLSNREAQLAASKENVISIENQLEPLKSSLAVVEQNLTKVMRLDNEVK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ + +++ +L+ ++++F G +L+ + + + EK L + +R +
Sbjct: 274 ALESRKRQMEKDNQDLQQKMEEVFQGTDEQLRDRYQNHQKIVKEKEKRLLDCKRDLDRAT 333
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+E ++ ++ +E ++ G+L+ + H++ T + + +LA L LD ++ +T
Sbjct: 334 KECQRFNSEKSELLIERGRLQLQADRHQEHIVTRDSLIQSLAAQLELDGFEQAPFTERHI 393
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
++ + D+ + R F+ E KQ +I+ + +K LE I K I+
Sbjct: 394 ASFRRLVKDRQDRDTEAANRMMREFAQKETMKQKQIDEIRDKKTGLERTI-DLKSDIQNK 452
Query: 475 KK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ +L NV ++ ++ + L ++ ++ E+++ ++ + + L+ E++ ++
Sbjct: 453 KQAELKNVKCELQQLEGFSDRISELDEEIGKMEHELEKAERNSNVETLEQEVQTLQNEKI 512
Query: 534 ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE 593
L+ L +D E+ L T+ +++ LK K K I +K RH L P
Sbjct: 513 NLDKALRRLDQEMEQLNLHTTTITQMEMLKKDKAEKEDQIRKVKSRHSEELTSLLGYFPN 572
Query: 594 ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRM 653
K L+ L IN+ ++ + K L ++E + + +S L+ ++ L+ ++
Sbjct: 573 ---KKQLEDWLHGKNKKINQTRDTLANLNKRLASVEYDKTYASNELKKKEAQLSSHEAKL 629
Query: 654 ELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFE 712
V GS+ F+ +L+++ E+++ ++ +++ +++ +I +L EEN+ CP+C R F+
Sbjct: 630 FDVCGSQDFDSDLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSCCPVCQRVFQ 689
Query: 713 SDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPS 772
++ + +++ L++K++ P++ + ++ + + K++ + LKP+ +++LQD +IP
Sbjct: 690 TEAELQDVISDLQSKLRLAPDKLKSTESELKRKEKKRDEMMSLKPLRRTVVELQDKEIPD 749
Query: 773 LRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQREL 832
LRSK+ ++ KGE+++ ++ L+T ++E+ A + D+TL+++ ++ ++R++
Sbjct: 750 LRSKIQNANRDLTGLKGEIEEQESLLQTALSEEEGAKARLQDITLMERYQTDIRDVERKI 809
Query: 833 ERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+QE+K+ G+ + + QV ++++KK+ +T SKIE Q ++Q L+ N
Sbjct: 810 AQQEAKLLGVNLSRT-VHQVSKEKQDKKHLWDTVTSKIELNQKLKQDQQSQIQQLRSAVN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDA 952
D+ +++L + + LE++ E+ E++E +V P++ +L+ Q E +
Sbjct: 869 DLKAEKLQIVSSMQRRRQLEEQTVEVTTEVQALCREIKEAEEQVLPLDAKLDKLQQEKEE 928
Query: 953 L-------KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQ 1005
L KE ++K+N K++D K ++E++ NY ++G +E +
Sbjct: 929 LVNKRTASNKETQEKMNSINEKVKDIYKYVKEIE-------NYIQQG--------KEDYK 973
Query: 1006 KLNQRKEDIIAKR-GVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKE---- 1053
K + + D + R CE+ +IN Q I Q + E L++NLTL ++ E
Sbjct: 974 KQKESELDEVNSRLAACEKQKEKINKEMEMTRQDIDTQKIRERWLEDNLTLRKRNEELKE 1033
Query: 1054 ---------------AVAKLNEELKLSEIMISDLTKYHHT-------LENCVIKYHSQ-K 1090
V ++ E K E I L + HH E ++++ + +
Sbjct: 1034 VEDNIKQLMKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRGFEEEIVRFRKELR 1093
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+Y + ++ +E++ DL Y+ L+ ++ +HS KM IN++IR+ W
Sbjct: 1094 EPQFKDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKMEEINKIIRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
IY+G DI+YI I +D + ++KRR YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 IYRGQDIEYIEIRSDADESVSATDKRRNYNYRVVMVKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISD---------------------------------------QKNFQLIVITHDEEF 1228
RL +++ Q+NFQL+VITHDE+F
Sbjct: 1214 RLALAETFCINCGILALDEPTTNLDRENIESLAHALVEIIKSRLHQRNFQLLVITHDEDF 1273
Query: 1229 IENL 1232
+E L
Sbjct: 1274 VELL 1277
>gi|195402597|ref|XP_002059891.1| GJ14987 [Drosophila virilis]
gi|194140757|gb|EDW57228.1| GJ14987 [Drosophila virilis]
Length = 1312
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 371/1360 (27%), Positives = 669/1360 (49%), Gaps = 113/1360 (8%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I G+R+F A+ V + F P+TLI+G+NGCGKTTIIEC+K+ALT E P G
Sbjct: 1 MSTIEKLSIQGVRSFGANAEDVQSITFSSPITLILGQNGCGKTTIIECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ SGK+FV HDP+I K E+ A VKLQ + + + RS
Sbjct: 61 SDSGKSFV--------------------HDPKIFGKKESLAQVKLQVRDRRDMCLSICRS 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESV--------LEMCNLIGVSKA 170
+ +S GK T D+T++ F K QES+ + + + +GVSKA
Sbjct: 101 MKVSIVRGKPTFKTLDSTLN---FLGSDGKPAKANSQESLSFRGINTDVAVSDFMGVSKA 157
Query: 171 ILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAH 230
I+N+V+FCHQE++SWPLDE KK+KE FD IF T+YNKAL+ I R +E+ ++A+
Sbjct: 158 IINSVLFCHQEDASWPLDEAKKLKEKFDAIFGITEYNKALDRIIKLRKTAMEELKVMEAN 217
Query: 231 YQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMS 290
+ + KKE D K + +K ++ EE + +E +KPI+ +L ++ RN+
Sbjct: 218 MKFLEHLKKEMDEKTLSLEQAQKKCEEIKEECNKCDEEVKPIDARLQEI----RNIEFEI 273
Query: 291 TQYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDE---KCSEL 343
+YQ +K E D ++C E L+ +IK F G EL+ ++ F + E + +++
Sbjct: 274 GKYQAQKVEMDTKHKNCVEQIANLKRNIKSPFQGSLVELEVEMRSFSQRMSEVRFQRTDV 333
Query: 344 ENQ-ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLD 402
E Q +L+ +++K E M K + ++E ++L++ +L+ L L +
Sbjct: 334 EEQLNQLRKSNAEQQKTLAKQDKERCMAQQKQKNEQECKQQLSE----RLHALCQQLQIS 389
Query: 403 TTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELES 462
A P++ L+ + +I L + +QA+I+ L E + E
Sbjct: 390 VPAAVVDEPQQLADLLDDIDVNLMSKQCEITELAAQNDQADQMRQAKIDELRTELTKSEQ 449
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
I + +QQ ++++ ++ +I ++ S L+VL+ ++ + + ++ ++S + + +
Sbjct: 450 SISTQEQQKAASERESESLEVKIKQIETSLHQLKVLEKQIADTDEKYERTTRSFNQEACR 509
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
I E + +D +++ L + +AEI + E K +I+ ++ +H
Sbjct: 510 QLIAGKKASITEKQKRFKQLDEQLTFLSSIAKLMAEIGLKEKELEKKNQEIHRVRSKHSE 569
Query: 583 AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
F F+ N++ ++ A + +I + + N + + E N +
Sbjct: 570 HFGKFFNEPISSNYRRAMQNAYDKLRREIQELNDKANGHKLDEQSHEIKRKNLIADIARM 629
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEP 702
++ L E +R+ + P+++ L R + + Q E + S + ++ YI K++E EP
Sbjct: 630 EKELQEFEERIYQKCHATPYDELLLRSKTAISKLQLEHGALKSAEAMYKKYIQKIDE-EP 688
Query: 703 RCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENI 762
CPLC D + L +L +I+++P+ + + + +L ++KP + +
Sbjct: 689 SCPLCHHNMSGDEAC-DLTTELTDEIQKLPDNITRAEKALKSEQLKYENLLQIKPAIDKV 747
Query: 763 MKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNI 822
+L++T +P + +L +E + E E + L L P + A ++ GD+TLLD+ +
Sbjct: 748 SELKET-LPKKKDELRGIERRLGEIVAEYETLMALLGEPTNNVELANAMLGDMTLLDEAL 806
Query: 823 RELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNE 882
+E ++++LE+ + K+ V + + A++ E EL +E+ Q E
Sbjct: 807 KESVRVKKDLEQLKLKLPENYDANVSTEALQAEKTEVSKELEAESKALETSQQTFEQQME 866
Query: 883 KLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQ 942
L L++ +N + K++ +Q G L L++R EL M TE+ EL K+ PI+ +
Sbjct: 867 ALNRLREFRNGLKDKRIKLQEGVQSLPQLKERLDELTRMLISLTTEIAELRSKIQPIKQR 926
Query: 943 LNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIK--------LEILNYTKR--G 992
L+ A SE +K+ + +L++ K Q+Y ++++R+K L+++N +
Sbjct: 927 LSAALSEKARMKESERLQLSKLQTKYQEYKSTDQDIQRLKKQAQEFDSLDLVNAINKYDA 986
Query: 993 TLTQLAA--------LRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKN 1044
T+ + A ++E ++L K + + ++ + ER + + N+ + L+E +L
Sbjct: 987 TINSIKAELNKMEAQIQEKSEQLETLKTECLNQQSL-ERDLKD-NRELKQLQLKEAELSE 1044
Query: 1045 NLTLLEKK------EAVAKLNEEL----KLSEIMISDLTKYHHTLENCVIKYHSQ-KMRS 1093
N L K+ +V K EL ++ + +L + N V K +
Sbjct: 1045 NCQTLSKQLGNLDFRSVTKEKNELMKRRDMASVRRGELLGQQGEINNQVAKLQMEISEPK 1104
Query: 1094 INRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
++ Y +++ + I DL ++ LE +I++H++KM +IN LIREYW IY+
Sbjct: 1105 YKESMKNYMRGQFEVAVKRRGIDDLGQHRVALEWALIQFHAEKMNNINSLIREYWRMIYR 1164
Query: 1154 GNDIDYISIAA---DVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
GNDIDYI I D +++R+ YNYRVVQ KN E +MR RCSAGQRVL LIIR+
Sbjct: 1165 GNDIDYIQIKTDELDKDASADRRKNYNYRVVQSKNNSEIEMRGRCSAGQRVLGSLIIRMA 1224
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
+++ + V+ DE T +DR +V +L + +R
Sbjct: 1225 LAETFSSNCGVLALDEP----TTNLDRDNIV-------SLCDALNRI------------- 1260
Query: 1271 DIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRD 1310
+++ Q NF LI+ITHDE FI +L I + R+ RD
Sbjct: 1261 -VESRQYQSNFMLIIITHDENFISSLGRITSYH--RVQRD 1297
>gi|354472602|ref|XP_003498527.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
[Cricetulus griseus]
Length = 1312
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 358/1333 (26%), Positives = 676/1333 (50%), Gaps = 134/1333 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S K+ K T + I+RK V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MLCSQKSKKTEFKTLEGIITRKKHGEKVSLSSKCAEIDR--EMISCLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E ++P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLASSQEIVKSYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEAR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSDRQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDL 478
++ + ++ L ++ E KQ +I+ + +K L I+ + + + +L
Sbjct: 398 ELVRERQEREAKTASQLLNDLTEKETLKQNQIDEIRDKKSGLGGMIELKTELLTKKQSEL 457
Query: 479 TNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDE 538
NV ++ ++ S + L +L + E+++ K+ + LK E+ + ++ EL+
Sbjct: 458 RNVKNELQQLEGSSDRILELDQELTKAERELNKAEKNSSVETLKAEVISLQNEKAELDRS 517
Query: 539 LCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKN 598
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 518 LRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLLGYFPN---KK 574
Query: 599 SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLG 658
L+ L S + +IN+ ++ + K L + E N S+ + L+ ++ L+ D++ V G
Sbjct: 575 QLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKSHINNELKKKEEQLSSYEDKLFDVCG 634
Query: 659 SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYSV 717
S+ FE +L R+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++ +
Sbjct: 635 SQDFESDLGRLKEEIEKSSKQRAMLGGATAVYSQFITQLTDENQSCCPVCQRVFQTETEL 694
Query: 718 PGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKL 777
+++ L++K++ P++ + ++ + + +++ + L P+ ++I+ L++ +IP LR+KL
Sbjct: 695 QEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEKEIPELRNKL 754
Query: 778 IELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQES 837
+ ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q +
Sbjct: 755 QSVNRDIQRLKTDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELRDVERKIAQQAA 814
Query: 838 KISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKND 893
K+ GVDLD QV +++EK+++L+T SKIE + + E++Q L+ + N+
Sbjct: 815 KLQ-----GVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSKTNE 869
Query: 894 IHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELDA 952
+ S++L + + +E++ EL + S+Y+ E+++ ++ P+ET L Q E +
Sbjct: 870 LKSEKLQISTNLQRRQQMEEQTVELSTEVQSLYR-EIKDAKEQINPLETALEKFQQEKEE 928
Query: 953 LKKEHKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG----TLTQLAALRESVQK 1006
L H+K+ + + A KI D ++++ + +I NY + G + L E V +
Sbjct: 929 LI--HRKQTSNKMAQDKINDIKEKVKNINGYMKDIENYIQDGKDDYKKQKETELNEVVAQ 986
Query: 1007 LNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL--------------- 1048
LN+ KE I + G + Q I Q ++E L++NLTL
Sbjct: 987 LNECDKHKEKINKEMGT-------MRQDIDTQKIQERWLQDNLTLRKRREELKEVEEERK 1039
Query: 1049 -----LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1103
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1040 QHLKEMGQMQVLQMKNEHQKLEENI--DTIKRNHSLALGRQKGYEEEILHFKKELREPQF 1097
Query: 1104 RIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQG 1154
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+G
Sbjct: 1098 RDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRG 1157
Query: 1155 NDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL +
Sbjct: 1158 QDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLAL 1217
Query: 1212 ---------------------------------------SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL+VITHDE+F+E L
Sbjct: 1218 AETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELL 1277
Query: 1233 TA---IDRAYVVR 1242
+++ Y VR
Sbjct: 1278 GRSEYVEKFYRVR 1290
>gi|119582732|gb|EAW62328.1| RAD50 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
Length = 1315
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 372/1373 (27%), Positives = 705/1373 (51%), Gaps = 136/1373 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + ++ + K + + E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVR---ERQEGEAKTANQLMAKKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 452
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 453 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 508
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 509 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 568
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 569 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 625
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 626 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 685
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 686 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 745
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 746 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 805
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 806 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 860
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 861 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 919
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 920 QQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 975
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL ++ E + +
Sbjct: 976 -ELNK----VIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1030
Query: 1058 LNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIR 1099
+ EE K + ++ + + H LE + K + +++ + +R
Sbjct: 1031 VEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELR 1090
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1091 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1150
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQR------V 1201
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+ V
Sbjct: 1151 TYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKAGAFFQV 1210
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
LA LIIRL +++ +I DE T +DR + + AL E
Sbjct: 1211 LASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------- 1255
Query: 1262 ALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1256 ----------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1296
>gi|301754245|ref|XP_002913000.1| PREDICTED: DNA repair protein RAD50-like [Ailuropoda melanoleuca]
Length = 1312
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 356/1334 (26%), Positives = 681/1334 (51%), Gaps = 135/1334 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I N + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITNKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIQARDSLIQSLAAQLELDGFERGPFSERHIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
++ + ++ L F++ E KQ +I+ + +K+ L +I K +I K+ +
Sbjct: 398 RLVRERQEREAEIASQLMNDFAEKETLKQKQIDEIRDKKIGL-GRIIELKSEILSKKQNE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L++ E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LRNVKYELQQLEGSSDRILELDQELSKAERELSKAEKNSNVEALKTEVISLQNEKADLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE++LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFENDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L PV ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+ DLD QV +++EK+++L+T SK+E + + E++Q L+ N
Sbjct: 814 AKLQGL-----DLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLIQDQQEQIQHLKSTTN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+++ E+++ +++P+ET L Q E +
Sbjct: 869 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLFR-EIKDAKEQLSPLETTLEKFQQEKE 927
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
L KK K+ ++ K+ D ++++ + +I NY + G + ++ +LN+
Sbjct: 928 ELINKKNKSNKIAQD--KMNDIKEKVKNIHGYMKDIENYIQDG---KDDYKKQKENELNK 982
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
++A+ CE+ IN Q I Q ++E L++NLTL
Sbjct: 983 ----VMAQLSECEKHKENINTDMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ R +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHSLAIGRQKGYEEEIIHFKRELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLA 1216
Query: 1211 I---------------------------------------SDQKNFQLIVITHDEEFIEN 1231
+ S Q+NFQL+VITHDE+F+E
Sbjct: 1217 LAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVEL 1276
Query: 1232 LTAIDRAYVVRIVR 1245
L + YV + R
Sbjct: 1277 LGRSE--YVEKFYR 1288
>gi|347970376|ref|XP_313457.4| AGAP003676-PA [Anopheles gambiae str. PEST]
gi|333468904|gb|EAA08790.4| AGAP003676-PA [Anopheles gambiae str. PEST]
Length = 1308
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 389/1389 (28%), Positives = 679/1389 (48%), Gaps = 158/1389 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I GIR+F D+ V + F+ PLTLIVG+NGCGKTTIIEC+K+ LT E P G
Sbjct: 1 MSTINKLEIRGIRSFGVDRADVQQINFRSPLTLIVGQNGCGKTTIIECLKYGLTGEVPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G +G FVHDP+I E+ VKL +TV +RS
Sbjct: 61 TNRG--------VG------------FVHDPKIFNTVESLGQVKLMVKDFTGNTVTAIRS 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVL----EMCNLIGVSKAILNN 174
+ +++K T D+TI+ + T K + + V EMC+ +GVSKAILNN
Sbjct: 101 MKITHKGKNPKFETMDSTITMENAQT---KEKVTMTRSRVTDINNEMCDAMGVSKAILNN 157
Query: 175 VIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALES-IKIQRDRLRKEIPEIKAHYQA 233
VIFCHQE+S WPL+E K++K+ FD IF T+YN+ ++ IKI ++ +++ E + +
Sbjct: 158 VIFCHQEDSCWPLEEPKELKKKFDAIFGTTEYNRVIDKLIKISKE-YNEKLKEKQGDLKL 216
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
N K +A++K+ + + + + + + +EE ++PI KL QL ER S + +
Sbjct: 217 LQNVKAQAETKQLQLEDGERNMARLTQMIGELEEDIRPIQSKLEQLALVERQYSSLLAKK 276
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE------ 347
++ E +L S I +LF G EL+ ++ +F+ K SELE++E
Sbjct: 277 IEFNSKIKSKHEQSQQLRSKINKLFEGSLPELEMEVRIFQQTSASKRSELEDEEAELQRL 336
Query: 348 RLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCL---DTT 404
+L+ + +Q + QS I+ +++L + ++ E ++L K+ L D L L D
Sbjct: 337 KLQDRSLQSKLQS---IDGQKIELAEKQKRE---RELQIERGKKIRALGDKLSLSLSDDY 390
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
+ E + + + + ++ + F + + Q I+ L K LES
Sbjct: 391 GAASVNASLVEAALGSIRNALKAQEATVQSKGKAFEEEDAQAQKRIDKLRETKATLESDC 450
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
S ++QIE ++ ++ E+ +S TL+ L +++R+ E + + D + E
Sbjct: 451 TSKRKQIEQLDREKLQTAREVAEIERSAETLKRLIDEIDRLEQEYETQVTAADLPAKRKE 510
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
+ R++L+D+L +D IS L A + E+ + + + A++ L+ +H +
Sbjct: 511 LAERKLLRDQLQDQLDKLDERISSLDAVAMKEQELTLKEQQCTGREAELRRLRNKHGDSL 570
Query: 585 HLLF-DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQK 643
LF D E N+K++L + ++ + E + + + +E + + L +
Sbjct: 571 RRLFPDRTIESNYKSNLQNLYDELQKEVKTVNEKVRRTQATVTEMETTRKSQKQQLDRLE 630
Query: 644 RTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPR 703
R LA+ +++ +E+ L ++ ++++ E S L+ +I ++ N+
Sbjct: 631 RELADAEEKIYSACRGNAYEEVLAKLNEKIQKNNMEHGEARSAVVLYQKFIANID-NDRC 689
Query: 704 CPLCTRFFESD--YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRS----LQELKP 757
CP+C + ES+ + V G KL +I+ +PE+ +++ K+ R+ L LKP
Sbjct: 690 CPVCEKGLESEDAHEVSG---KLGDEIRRLPEKIET----LERTLKKDRADYDKLLALKP 742
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTL 817
+ E + K Q ++P L+ +L + E+ + EL++ + A+ P + ++ GD+++
Sbjct: 743 ISERLEK-QRKELPQLKQQLQDTEKRLSTASDELEEYQLAVSEPTANMQLINAIVGDMSV 801
Query: 818 LDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRL 877
LD+ EL ++R +E +++ + GV ++ + ++++ + + T R++ + Q +
Sbjct: 802 LDKLGSELERMKRGVEELRAQLGPNMAEGVTIESLKSEREALRAKFKTERNRTDELQNTI 861
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKC---ELEGMDSVYQTELEELGR 934
++ EKL +LQ + N + SK+L +Q ++SLE ++ EL + + E ++ R
Sbjct: 862 DTKTEKLNNLQARNNQMKSKKLKLQES---VQSLEQKRASVNELGAKIATLEEEFKDAER 918
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTL 994
++ P+ QL + K+++ K+L Q K LEE++ + I+ + G L
Sbjct: 919 RLTPVRQQLQQELEQKQRSKEQNNKEL-------QRLRKALEELRWEETAIVRLS--GEL 969
Query: 995 TQLAALRESVQ--KLNQRKEDIIAKRGVCERT-------INEINQSIANQSLEEIDLKNN 1045
LAAL V+ +L ++E ++ +RT I ++ Q IANQ L+E DL +N
Sbjct: 970 DDLAALNLGVELSRLQAKREQTQQEQDQLKRTMDGKAKSIEKLRQDIANQHLQERDLLDN 1029
Query: 1046 LTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKM-------------- 1091
L A L EL + L K +E C ++ ++
Sbjct: 1030 RDLKRLMRETADLEAEL-------AALVKSMGEMEVCSVQKERDRLIDLRDELQARRSEM 1082
Query: 1092 --------RSINRL------------IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIK 1131
R +N L +R Y T + + + +ISD+ KY LE+ + +
Sbjct: 1083 NGKVGELQRQLNELRKELNRSEFRNAVRNYVTTLTESIVQRKIISDIKKYRDALESALRE 1142
Query: 1132 YHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTG--SEKRRTYNYRVVQKKNGIE 1188
YH++KM+ INR I W IY+GNDIDYI I D G S+KRR Y Y VVQ KN +E
Sbjct: 1143 YHTEKMQEINRTIFSLWRDIYRGNDIDYIRINTVDDGVAERSDKRRAYTYGVVQAKNDVE 1202
Query: 1189 QDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHK 1248
DMR RCSAGQ+VLA LIIRL +++ + V+ DE T +DR +
Sbjct: 1203 IDMRGRCSAGQKVLASLIIRLALAETFSSNCGVMALDEP----TTNLDRDNI-------D 1251
Query: 1249 ALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIV 1308
+L E+ R I + + +F LIVITHDEEF+ L + Y RI
Sbjct: 1252 SLCESLRR---------------IVSEREGGHFLLIVITHDEEFVTKLEKFENYY--RIS 1294
Query: 1309 RDHKGLSDI 1317
R+ +G S I
Sbjct: 1295 RNSEGKSVI 1303
>gi|340718254|ref|XP_003397586.1| PREDICTED: DNA repair protein RAD50-like [Bombus terrestris]
Length = 1387
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 365/1364 (26%), Positives = 679/1364 (49%), Gaps = 141/1364 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRV-VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L I GIRNF + +RF RPLTLI+G NG GKTTIIE +KFA E+P G+
Sbjct: 1 MSRIRRLSIRGIRNFGDLNDEAKIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK F F+HDP + +VK + + + R++
Sbjct: 61 DRGK-F-------------------FIHDPTLSATPSIRGVVKAEIIDAAGNMYIICRTI 100
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLG----CLQQESVLEMCNLIGVSKAILNNV 175
+ N T D ++R G K L C ++ L + +GVSK IL+ V
Sbjct: 101 ESTKGNVSVKFKTLDNALTR--IVKGQNKVLSISNKCANVDTELTLA--MGVSKPILDYV 156
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+ +WP +GKK+KE FDEIFD+ ++NKALE+I + +++ +K Q
Sbjct: 157 IFCHQEDLNWPFQDGKKLKEKFDEIFDSARFNKALENIMKYIKDMNQKMHILKEQKQNCQ 216
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
E K+ + +N ++ + S ++ ++ ++P+ +K+ + + + + + + +
Sbjct: 217 LIVSEVADKEAKLEDNKKRLEDSKAKIVEFDKELEPVQQKIKKFEKLDADYKNLQNEEKR 276
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELEN-QERLKSQYI 354
KK E DM ++ + LE ++ +F G K EL ++ L + ++E +RLK+
Sbjct: 277 KKAEYDMFKQQLDRLEEDLQYVFEGTKEELLKQIESHDEELIGQTDKIEELAKRLKNIAG 336
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKK--------LNDTLKT-KLNNLADTLC-LDTT 404
+E S NE ++ G L + + H++ LN+ L + ++N+ + L+
Sbjct: 337 KESSISSDLSNE-RVSNGSLRQQIKDHERKVNLRNAILNEILSSWNIDNIDTNVSELEIM 395
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
A + E+ E L ++ + K L+R + EN I++L + ++ES+
Sbjct: 396 ALTSRLTEKMEEL---------RHCVEQKRLKR--EEEENALHKAIDSLRSKHSKVESEK 444
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
+ ++ K+++ + I ++ + S L ++ ++ V ++ +L++++D + +K E
Sbjct: 445 NLKESEVTQTKEEINKIKLDIAQLGAAASKLSSIELRIQEVQKKVQELNEAMDVNVVKKE 504
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
+ I+ RNE+E L +D EI++L Q+ AE+ K+ +SK +I LK + +
Sbjct: 505 VVNKIKIRNEMETLLNTVDQEITLLSKQSTQQAELDLNKSTLDSKEKEIEELKNKREEDI 564
Query: 585 HLLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
LFD+ + + K +LD + ++ I ++I A+E+ + TLE +S+ L+++
Sbjct: 565 MTLFDIKELSQTKLKTNLDVVQKQLANEMESINQEIQAEERRITTLETTISHIEHELQNK 624
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEP 702
KR + +++ V K F++ L + ++K Q++ M + Y+ +L E P
Sbjct: 625 KREINSDKEKVSSVCHYKSFDETLLLQSKKVKDLQDKRGMYAHQSVAYKEYMKQLRETNP 684
Query: 703 RCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENI 762
CPLC R F+ +V L+ +++++++ P + + + ++ + +LKPV E I
Sbjct: 685 SCPLCHRDFDKRENVVTLLKEMESEMENHPNRLKECERELKTQQEKYDKMLQLKPVVEKI 744
Query: 763 MKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNI 822
++L+++++ L + L + + + ++ + +L+T PK K + GD+ L D I
Sbjct: 745 IQLEESELEKLMNSLEKSKNKLSISRTTVMELETKKTCPKKKLAICKDIVGDIMLWDTYI 804
Query: 823 RELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSH 880
+++ L++ ++ + ++ +G++ T L++ +Q++E K L R IE Q+++N H
Sbjct: 805 DDISKLKQTIDNLQIRMTAAGIK-TKRSLEEAQSQREELKMSLKNIRDNIEELQSKINMH 863
Query: 881 NEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIE 940
NEKL + ++++N + ++L +Q +K L++++ L + + L ++V E
Sbjct: 864 NEKLNNARQEQNTLQEEKLKIQSDIQKVKELKEKQETLYSKEISLWKSINILKKQVTIAE 923
Query: 941 TQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAAL 1000
T+LN +L+ +K++ KL + + D ++L E++RI+ E+ L
Sbjct: 924 TELNSELEKLEEKRKDNSAKLECDRKLVTDAVRRLSELQRIQDEVDISVYNNVPESLENS 983
Query: 1001 RESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNE 1060
+ ++ + +++ ++ E TIN++ +++ Q + + +L +NL LL+ +E L +
Sbjct: 984 EKKIKDYEKLLNELLCEKSDIETTINKLKENVTRQEVRKRELSDNLALLQTQETTKNLQQ 1043
Query: 1061 EL-----KLSEIMISD---------------------LTKYHHTLENCVIKYHSQKMRSI 1094
+ KL+ I S + LE + +Y + + I
Sbjct: 1044 KYLKIKEKLNAINYSQVLNDWKNVQSREQTILRQQNIIKGNQEELERTLQQYTQELKKDI 1103
Query: 1095 NRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R R+ Y ++ +L + E I +L Y L+ +I+YH ++M ++NR+I++ W +Y
Sbjct: 1104 YRQARKNYKSKCIELTVIEEAILNLKAYSKALDVAMIQYHEERMATVNRIIKQMWKLVYT 1163
Query: 1154 GNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
G D I I D G GS RRTYNY++VQ K+G E DM+ RCSAGQ+VLA +IIRL
Sbjct: 1164 GKDTTSIEIHTDATEGIGS-TRRTYNYKLVQMKHGHEIDMKGRCSAGQKVLASIIIRL-- 1220
Query: 1212 SDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD 1271
ALAETF ++CGI ALDEPTTNLD
Sbjct: 1221 -------------------------------------ALAETFCKDCGILALDEPTTNLD 1243
Query: 1272 IKNASD---------------QKNFQLIVITHDEEFIENLTAID 1300
+NA QKNFQLIVI+HDE+F+ L ++
Sbjct: 1244 QENADSLAEALATVVKLRSQHQKNFQLIVISHDEKFLFKLAELN 1287
>gi|229368749|gb|ACQ63030.1| RAD50 homolog isoform 1 (predicted) [Dasypus novemcinctus]
Length = 1312
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 368/1352 (27%), Positives = 688/1352 (50%), Gaps = 134/1352 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I N + S E + + E + P+ +L ++ E+N+S VM + K
Sbjct: 218 EKACEIRDQINNKEIQLTSSKEIVKSYENELDPLKNRLKEI---EQNLSKVMRLDNEIKA 274
Query: 298 --TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
+ + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LDSRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + E ++ G+L++ + H++ + + +LA L LD + + + +
Sbjct: 335 ECRLLNQEKAELLVEQGRLQQQADRHQEHIRARDSLIQSLAAQLELDGFERGPFNERQIK 394
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
K+ + ++ + L F++ E KQ +I+ + +K L +I K +I K
Sbjct: 395 NFHKLVRERQERESETVNQLMNDFTEKETLKQKQIDEMRDKKTGL-GRIIELKSEILNKK 453
Query: 476 K-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+ +L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +
Sbjct: 454 QNELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVETLKTEVVSLQNEKAD 513
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 514 LDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDDLTSLLGYFPN- 572
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++
Sbjct: 573 --KKQLEDWLHSKSKEINQTRDRLAKFNKELASAEQNKNHINNELKRKEEQLSSYEDKLF 630
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F++
Sbjct: 631 DVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQT 690
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + +++ L++K++ P++ + + + + K++ + L P+ ++I+ L++ +IP L
Sbjct: 691 EAELQDIISDLQSKLRLAPDKLKSTELDLKKKEKRRDEMLGLVPMRQSIVDLKEKEIPEL 750
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R++
Sbjct: 751 RNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDITIMERFQMELKDVERKIA 810
Query: 834 RQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKND 893
+Q +K+ G+ + QV +++EK+++L+T SKIE + + E++Q L+ N+
Sbjct: 811 QQAAKLQGI-DLNRTIQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEEIQHLKSTTNE 869
Query: 894 IHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELDA 952
+ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q E +
Sbjct: 870 LKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKED 928
Query: 953 L--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQR 1010
L KK K+ ++ K+ D ++++ + +I NY + G +E+ +LN+
Sbjct: 929 LINKKNTSNKIAQD--KLNDIKEKVKNIHGYVKDIENYIQDGK-DDYKKQKET--ELNK- 982
Query: 1011 KEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL--------------- 1048
IIA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 983 ---IIAQLSECEKHKEKINKEMGVMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERK 1039
Query: 1049 -----LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1103
+ + + + NE KL E + D K +H L K + +++ + +RE
Sbjct: 1040 QHLKEMGQMQVLQMKNEHQKLGEKI--DSIKRNHDLALGRQKGYEEEIIRFKKELREPLF 1097
Query: 1104 RIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQG 1154
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+G
Sbjct: 1098 RDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRG 1157
Query: 1155 NDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL +
Sbjct: 1158 QDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLAL 1217
Query: 1212 ---------------------------------------SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL++ITHDE+F+E L
Sbjct: 1218 AETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLIITHDEDFVELL 1277
Query: 1233 TAIDRAYVVRIVRDHKALAETFS-RNCGIFAL 1263
+ YV + R K + + CGI +L
Sbjct: 1278 GRSE--YVEKFYRIKKNIDQCSEIVKCGISSL 1307
>gi|284004946|ref|NP_001164819.1| DNA repair protein RAD50 [Oryctolagus cuniculus]
gi|217273043|gb|ACK28136.1| RAD50 homolog isoform 1 (predicted) [Oryctolagus cuniculus]
Length = 1312
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 356/1338 (26%), Positives = 674/1338 (50%), Gaps = 143/1338 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ S K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCSQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISALGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E ++P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKESQLTSSKEIVKSYENDLEPLKNRLKEIEHSLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +Q+ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMQKDNSELEQKMEKVFQGTDDQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + + + +
Sbjct: 338 LLNQEKSELLIEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFNERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + ++ L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEREAETANQLMNDFAEKETLKQKQIDEIRDKKAGLGRIIELKSEILSRKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 455 ---SELKNVKYELQQLEGSSDRILELDQELKKAERELSKAEKNSNVETLKTEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIVDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ N++ S++L + + LE++ +L E+++ +V P+ET L Q
Sbjct: 864 KSTANELKSEKLQISTNLQRRQQLEEQTVDLSTEVQSLLREIKDAKEQVNPLETALEKFQ 923
Query: 948 SELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG-------TLTQLA 998
E + L KK K+ ++ K+ D ++++ + +I NY + G T+L
Sbjct: 924 QEKEELISKKHASNKIAQD--KLNDIKEKVKNIHGYVKDIENYIQDGKDDYKKQKETELN 981
Query: 999 ALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL---------- 1048
+ + + + KE I + G+ + Q I Q ++E L++NLTL
Sbjct: 982 KVTAQLSECEKHKETINKEMGI-------MRQDIDTQKIQERWLQDNLTLRKRNEELKEV 1034
Query: 1049 ----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLI 1098
+ + + + NE+ KL E + + K +H+L K + +++ + +
Sbjct: 1035 EEERKQHLKEMGQMQVLQMKNEQQKLQENI--ENIKRNHSLALGRQKGYEEEIIHFKKEL 1092
Query: 1099 REYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1093 REPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWR 1152
Query: 1150 RIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLI 1206
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LI
Sbjct: 1153 STYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLI 1212
Query: 1207 IRLFI---------------------------------------SDQKNFQLIVITHDEE 1227
IRL + S Q+NFQL+VITHDE+
Sbjct: 1213 IRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDED 1272
Query: 1228 FIENLTAIDRAYVVRIVR 1245
F+E L + YV + R
Sbjct: 1273 FVELLGRSE--YVEKFYR 1288
>gi|60392985|sp|P70388.1|RAD50_MOUSE RecName: Full=DNA repair protein RAD50; Short=mRad50
gi|1575575|gb|AAC52894.1| RAD50 [Mus musculus]
Length = 1312
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 360/1346 (26%), Positives = 681/1346 (50%), Gaps = 159/1346 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S KN K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKNKKTEFKTLEGVITRMKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I + + S E + + E+ ++P+ +L ++ E N+S +M + K
Sbjct: 218 EKACEIRDQITSKEAQLASSQEIVRSYEDELEPLKNRLKEI---EHNLSKIMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 335 EARLLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIK 394
Query: 416 G---LIKMSQ----TTIDKYLSDIKILERTFSDNENTKQAEINAL------IVEKVELES 462
L+K Q T + LSD+ +D E KQ +++ L + +EL++
Sbjct: 395 NFHELVKERQEREAKTASQLLSDL-------TDKEALKQRQLDELRDRKSGLGRTIELKT 447
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+I + KQ +L +V +++ ++ S + L +L + E+ + K+ + LK
Sbjct: 448 EILTKKQ------SELRHVRSELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLK 501
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
E+ + ++ +L+ L +D E+ L T +++ L K K I +K RH
Sbjct: 502 AEVMSLQNEKADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSD 561
Query: 583 AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
L P K L+ L S + +IN+ ++ + K L + E N ++ + L+ +
Sbjct: 562 ELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKK 618
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENE 701
+ L+ D++ V GS+ E +L R+ E+++ ++ +M+ +++ +I +L +EN+
Sbjct: 619 EEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQ 678
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYEN 761
CP+C R F+++ + +++ L++K++ P++ + ++ + + +++ + L PV ++
Sbjct: 679 SCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPVRQS 738
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
I+ L++ +IP LR++L + ++ K ++++ +T L T +E++A D+T++++
Sbjct: 739 IIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERF 798
Query: 822 IRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRL 877
EL ++R++ +Q +K+ GVDLD QV +++EK++ L+T SKIE + +
Sbjct: 799 QMELKDVERKIAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHRLDTVTSKIELNRKLI 853
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVA 937
E++Q L+ + N++ S++L + + +E++ EL E+++ +++
Sbjct: 854 QDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREIKDAKEQIS 913
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG--- 992
P+ET L Q E + L H+K + + A KI D ++++ + +I NY + G
Sbjct: 914 PLETALEKLQQEKEELI--HRKHTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDD 971
Query: 993 ----TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
T+L + + + + +E I G + Q I Q ++E L++NLTL
Sbjct: 972 YKKQKETELNGVAVQLNECEKHREKINKDMGT-------MRQDIDTQKIQERWLQDNLTL 1024
Query: 1049 LEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLE---NCVIKYHS----------QK 1090
++++ + ++ EE K + ++ + + H LE + + + HS +
Sbjct: 1025 RKRRDELKEVEEEPKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEDE 1084
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSIN 1141
+ + +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN
Sbjct: 1085 ILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEIN 1144
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAG
Sbjct: 1145 KIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAG 1204
Query: 1199 QRVLACLIIRLFI---------------------------------------SDQKNFQL 1219
Q+VLA LIIRL + S Q+NFQL
Sbjct: 1205 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQL 1264
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVR 1245
+VITHDE+F+E L + YV + R
Sbjct: 1265 LVITHDEDFVELLGRSE--YVEKFYR 1288
>gi|153945822|ref|NP_033038.2| DNA repair protein RAD50 [Mus musculus]
gi|148701627|gb|EDL33574.1| RAD50 homolog (S. cerevisiae) [Mus musculus]
gi|195934765|gb|AAI68398.1| RAD50 homolog (S. cerevisiae) [synthetic construct]
Length = 1312
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 360/1346 (26%), Positives = 681/1346 (50%), Gaps = 159/1346 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S KN K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKNKKTEFKTLEGVITRMKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I + + S E + + E+ ++P+ +L ++ E N+S +M + K
Sbjct: 218 EKACEIRDQITSKEAQLASSQEIVRSYEDELEPLKNRLKEI---EHNLSKIMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 335 EARLLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIK 394
Query: 416 G---LIKMSQ----TTIDKYLSDIKILERTFSDNENTKQAEINAL------IVEKVELES 462
L+K Q T + LSD+ +D E KQ +++ L + +EL++
Sbjct: 395 NFHELVKERQEREAKTASQLLSDL-------TDKEALKQRQLDELRDRKSGLGRTIELKT 447
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+I + KQ +L +V +++ ++ S + L +L + E+ + K+ + LK
Sbjct: 448 EILTKKQ------SELRHVRSELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLK 501
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
E+ + ++ +L+ L +D E+ L T +++ L K K I +K RH
Sbjct: 502 AEVMSLQNEKADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSD 561
Query: 583 AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
L P K L+ L S + +IN+ ++ + K L + E N ++ + L+ +
Sbjct: 562 ELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKK 618
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENE 701
+ L+ D++ V GS+ E +L R+ E+++ ++ +M+ +++ +I +L +EN+
Sbjct: 619 EEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQ 678
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYEN 761
CP+C R F+++ + +++ L++K++ P++ + ++ + + +++ + L PV ++
Sbjct: 679 SCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPVRQS 738
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
I+ L++ +IP LR++L + ++ K ++++ +T L T +E++A D+T++++
Sbjct: 739 IIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERF 798
Query: 822 IRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRL 877
EL ++R++ +Q +K+ GVDLD QV +++EK++ L+T SKIE + +
Sbjct: 799 QMELKDVERKIAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHRLDTVTSKIELNRKLI 853
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVA 937
E++Q L+ + N++ S++L + + +E++ EL E+++ +++
Sbjct: 854 QDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREIKDAKEQIS 913
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG--- 992
P+ET L Q E + L H+K + + A KI D ++++ + +I NY + G
Sbjct: 914 PLETALEKLQQEKEELI--HRKHTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDD 971
Query: 993 ----TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
T+L + + + + +E I G + Q I Q ++E L++NLTL
Sbjct: 972 YKKQKETELNGVAVQLNECEKHREKINKDMGT-------MRQDIDTQKIQERWLQDNLTL 1024
Query: 1049 LEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLE---NCVIKYHS----------QK 1090
++++ + ++ EE K + ++ + + H LE + + + HS +
Sbjct: 1025 RKRRDELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEDE 1084
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSIN 1141
+ + +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN
Sbjct: 1085 ILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEIN 1144
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAG
Sbjct: 1145 KIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAG 1204
Query: 1199 QRVLACLIIRLFI---------------------------------------SDQKNFQL 1219
Q+VLA LIIRL + S Q+NFQL
Sbjct: 1205 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQL 1264
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVR 1245
+VITHDE+F+E L + YV + R
Sbjct: 1265 LVITHDEDFVELLGRSE--YVEKFYR 1288
>gi|91084903|ref|XP_969783.1| PREDICTED: similar to RAD50 homolog [Tribolium castaneum]
gi|270009233|gb|EFA05681.1| rad50 [Tribolium castaneum]
Length = 1309
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 378/1359 (27%), Positives = 661/1359 (48%), Gaps = 166/1359 (12%)
Query: 1 MALLDQLHIMGIRNFPADKN--RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA L++L I G+R+F ++ + ++F PLTLI+G+NG GKTTIIE IK+ T E PQG
Sbjct: 1 MATLERLQISGVRSFGPNEEHCQTIKFATPLTLILGQNGSGKTTIIEAIKYVCTAELPQG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G+ FV+D P++ T +KL+ N+ V + R
Sbjct: 61 TNGGQGFVND--------------------PKMSSLTTTRGQIKLRVVDSKNNAVTISRI 100
Query: 119 LLLSNKN-GKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
+ L+ +++ TI R + G ++ + E C ++ VS +ILNNV+F
Sbjct: 101 MELTQTAINTQRFSSKGATI-RIVKPNGDDSSISGRCADITNECCQIMNVSSSILNNVVF 159
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQENS+WPLDEGKKVKE FDEIFDA + NK +E + +++I +K +
Sbjct: 160 CHQENSAWPLDEGKKVKEKFDEIFDAQQSNKCVEIYRKLLKEKQEKIKLLKLELEYKKEK 219
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
K++ D K+++ + K + E+ ++P+ +++ ++ + E+ +S + TK+
Sbjct: 220 KEQVDKDKRVLQDKEAKLESFDAEIAQKMTKLQPVKKRIDEIIDLEKVLSELERDLATKE 279
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEE 357
++ + E ++ ++ F G ELQ K+ F+ +E + E L ++ +
Sbjct: 280 ATKNGLVEEQKTIKKNLAFEFEGTDQELQDKIKSFE-------NERQKDETLIQDLVKRQ 332
Query: 358 KQSHT---HINEA----QMKLGKLERDEETH--------KKLN----DTLKTKLNNLADT 398
T INEA Q LG+L + +++H KKL D + K++N D
Sbjct: 333 NDIETKKREINEAVQKTQSDLGRLNQ-QKSHNLKKCCERKKLFDQALDKFRVKISNFDD- 390
Query: 399 LCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKV 458
+T AK I ++ +++ D+ L + + QA ++ + + +
Sbjct: 391 ---NTGAKHA---------INQLKSALNERQDDLGTLIEEKELDLMSLQATLDDVRAKSI 438
Query: 459 ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
+ + I S +++ ++ + +V ++ + S LQ +L ++ I L+ S
Sbjct: 439 KTQQIISSKTREVTDCEQKIESVSLELAALASSDEFLQDYTKRLEAISKTIFNLNNSFRE 498
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE 578
+ +EA Q LE L ++ E IL + +I+S ++ K +IN +K
Sbjct: 499 TEESERMEASRSQVTTLEHNLDGLEREYRILLQNDTVEGKIESERHLIMEKQREINKIKS 558
Query: 579 RHDRAFHLLFDM-IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
+H + LF P+ N K+++ S + + E I K+K + TLE + N +
Sbjct: 559 KHAESLRELFGTQSPDCNLKDAVLAKQKSADLALQTLNEQIARKQKDVTTLEVQLQNQIE 618
Query: 638 TLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL 697
+ +R L +++ V + F++ L R + + +R Q + TS + ++N YI K
Sbjct: 619 RIGSCQRDLKTGREKISQVCNGRDFDEVLTRCSEKKERLQRDKGNYTSVKIIYNQYIKKF 678
Query: 698 EENEPRCPLCTRFFESDYSVPG-LVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELK 756
EE P CP+C F +V G ++ LK+K+ ++P+Q +T + + LQ+LK
Sbjct: 679 EEERPCCPVCETNFSGKTTVVGKIITTLKSKLDKVPQQLAKVETELVEEEALYNKLQQLK 738
Query: 757 PVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLT 816
V + I L +P L S L E++ + K +L+ LK P + + S+ D++
Sbjct: 739 VVNDEITVLTREKLPELESGLNEIKRDYEAKKTDLEALKQQTCGPLKTLEISKSVISDVS 798
Query: 817 LLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTR 876
LDQN +++ Q+ +E+ + +++ + S +V A+ K EL+ R KIE+ +
Sbjct: 799 TLDQNQADVDKSQKTVEKLKRELALVPSQKSK-QEVEAEIDSTKAELSELRRKIEAQTKK 857
Query: 877 LNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCE-------LEGMDSVYQTEL 929
+NSH ++LQ L +++N + KQ+ ++ +LE + E L G +TEL
Sbjct: 858 INSHKDRLQQLTQERNALFEKQIRMKDSMQNRPNLEAQLNEANEKLQTLRGEIVAKKTEL 917
Query: 930 EELGRKVAPIETQ-LNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY 988
E+L ++ IETQ NL Q E+K + +E ++ + + +++++ EI +Y
Sbjct: 918 EDLEDELGKIETQKKNLVQ--------ENKTVVEKERNQVAMFGNLVHNIEKLEGEIEDY 969
Query: 989 TKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
+ G +LAAL ++ + Q++ + + ++E +++A L L++N+TL
Sbjct: 970 VREGVDEKLAALETTLGEFRQKEATLDHTKTKILNLLSEKREALAKHELRFRTLQSNVTL 1029
Query: 1049 LEKKEAVAKLNEELKLSEIMISDLTKY-----HHTL--ENC-VIKYHSQKMRSINRLIRE 1100
EKK V +L+ LK I DL K + T+ E C +I+ ++IN + E
Sbjct: 1030 REKK--VLELDLVLK-----IEDLRKLIGGHDYRTVYDEKCELIRQKESHEKTINSITGE 1082
Query: 1101 --------------------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHS 1134
Y T++Y+LKL+E ++ DL KY LE ++++H+
Sbjct: 1083 KNALLETVDDLRLKLAKPDWKNAYSNYMTKLYELKLAECVVKDLFKYITVLEKAILEFHA 1142
Query: 1135 QKMRSINRLIREYWTRIYQGNDIDYISIAAD--VGTGSEKRRTYNYRVVQKKNGIEQDMR 1192
+M+ IN+ IRE W IY+GND+DYI I A+ T + ++RTYNYRVVQ K G+E +MR
Sbjct: 1143 TRMKQINKTIREMWREIYRGNDVDYIEIKAEHAGSTTANRKRTYNYRVVQVKKGVELEMR 1202
Query: 1193 NRCSAGQRVLACLIIRLFISD--------------------------------------- 1213
RCSAGQ+VLACLIIR+ +++
Sbjct: 1203 GRCSAGQKVLACLIIRMALAETLSANCGILALDEPTTNLDRENIFSLCEALARIVESRQK 1262
Query: 1214 QKNFQLIVITHDEEFIENLT-AIDRAYVVRIVRDHKALA 1251
+KNFQL+VITHDEEFI LT A + R+ R+ +
Sbjct: 1263 EKNFQLVVITHDEEFINALTRAQGVPFFYRVSRNQDGFS 1301
>gi|410948146|ref|XP_003980802.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Felis catus]
Length = 1312
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 350/1326 (26%), Positives = 675/1326 (50%), Gaps = 143/1326 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLISSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + +K + F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEKETEIANQMMNDFAEKETMKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L++ E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELRNVKYELQQLEGSSDRILELDQELSKAERELSKAEKNSNVEALKIEVISLQSEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ + T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKSDKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHLNNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQK 891
+ +Q +K+ G+ G + QV +++EK+++L+T SKIE + + E++Q L+
Sbjct: 809 IAQQAAKLQGL-DLGRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTT 867
Query: 892 NDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELD 951
N++ S++L + + LE++ EL TE++ L R++ + QL+ ++ L+
Sbjct: 868 NELKSEKLQISTNLQRRQQLEEQTVEL-------STEVQSLFREIKDAKEQLSPLETTLE 920
Query: 952 ALKKEHKKKLNEEGA-------KIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
++E ++ +N++ A K+ D ++++ + +I NY + G + ++
Sbjct: 921 KFQQEKEELINKKNASNKIAQDKMNDIKEKVKNIHGYMKDIENYIQDG---KDDYKKQKE 977
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL--------- 1048
+LN+ +IA+ CE+ IN Q I Q ++E L++NLTL
Sbjct: 978 NELNK----VIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1049 -----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+ + + + N+ KL E + D K +H+L K + +++ R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKNDHQKLEEKI--DNIKRNHSLAIGRQKGYEEEIIHFKRE 1091
Query: 1098 IREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1092 LREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLW 1151
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA L
Sbjct: 1152 RSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASL 1211
Query: 1206 IIRLFI---------------------------------------SDQKNFQLIVITHDE 1226
IIRL + S Q+NFQL+VITHDE
Sbjct: 1212 IIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDE 1271
Query: 1227 EFIENL 1232
+F+E L
Sbjct: 1272 DFVELL 1277
>gi|395817602|ref|XP_003782255.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Otolemur garnettii]
Length = 1312
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 356/1334 (26%), Positives = 675/1334 (50%), Gaps = 135/1334 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGERVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLIDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLAIQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + +K L F++ E KQ +I+ + +K L +I K +I+ K+ +
Sbjct: 398 KLVRERQEKEAETANQLMNDFAEKEALKQKQIDEIRDKKTGL-GRIIELKLEIQSKKQHE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L N ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LKNAKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVEALKMEVISLQNEKVDLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ + T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQINHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLADENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 814 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQLLKSTTN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDA 952
++ S++L + + LE++ EL E+++ +V+P+ET L Q E +
Sbjct: 869 ELKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIKDAKEQVSPLETTLEKFQQEKEE 928
Query: 953 L--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQR 1010
L KK K+ ++ K+ D ++++ + +I NY + G +E +K +
Sbjct: 929 LINKKNTSNKIAQD--KLNDIKEKVKNIHGYVKDIENYIEDG--------KEDYKKQKET 978
Query: 1011 K-EDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 979 ELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + + K +H+L K + +++ R +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEENI--ENIKRNHSLALGRQKGYEEEIIHFKRELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRNTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLA 1216
Query: 1211 I---------------------------------------SDQKNFQLIVITHDEEFIEN 1231
+ S Q+NFQL+VITHDE+F+E
Sbjct: 1217 LAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVEL 1276
Query: 1232 LTAIDRAYVVRIVR 1245
L + YV + R
Sbjct: 1277 LGRSE--YVEKFYR 1288
>gi|184185449|gb|ACC68855.1| RAD50 homolog isoform 1 (predicted) [Rhinolophus ferrumequinum]
Length = 1312
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 357/1321 (27%), Positives = 676/1321 (51%), Gaps = 133/1321 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFTPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FD+IF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDDIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I N + S E + + E + P+ +L ++ E+N+S VM + K
Sbjct: 218 EKACEIRDQITNKEAQLRSSKEIVKSYENELDPLKNRLKEI---EQNLSKVMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 335 ESRLLNQEKSELLVEQGRLQLQADRHQENIRARDSLIQSLATQLELDGFERGPFSERQIK 394
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
K+ + ++ + L F++ E KQ +I+ + +K+ L +I K +I K
Sbjct: 395 NFHKLVRERQEREAETLSQLMNDFAEKETLKQKQIDEIRDKKIGL-GRIIELKSEILSKK 453
Query: 476 K-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+ +L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +
Sbjct: 454 QNELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKNNNVETLKTEVISLQYEKAD 513
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ L +D E+ L T +++ L K K I +K RH + L P
Sbjct: 514 LDRTLRKLDQEMEQLNHHTTTRTQLEMLTRDKADKDEQIRKIKSRHSDELNSLLGYFPN- 572
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++
Sbjct: 573 --KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSNYEDKLF 630
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L ++N+ CP+C R F++
Sbjct: 631 DVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDDNQSCCPVCQRVFQT 690
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP L
Sbjct: 691 EAELQEVISDLQSKLRLAPDKLKSTESDLKKKEKRRDEMLGLVPMRQSIIDLKEKEIPEL 750
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R++
Sbjct: 751 RNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIA 810
Query: 834 RQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK 889
+Q +K+ G+ DLD QV +++EK+++L+T SKIE + + E++Q L+
Sbjct: 811 QQAAKLQGL-----DLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKS 865
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE 949
N++ S++L + + LE++ EL E+++ +V P+E L Q E
Sbjct: 866 VTNELKSEKLQISTNLQRRQQLEEQSVELSTEVQSLHREIKDAKEQVGPLEITLEKLQQE 925
Query: 950 LDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG-------TLTQLAAL 1000
+ L KK K+ ++ K+ D ++++ + I NY + G T+L +
Sbjct: 926 KEELIYKKNTSNKVTQD--KMNDIKEKVKNIHVYVKNIENYIQDGKDDYKKQKETELNKV 983
Query: 1001 RESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNE 1060
+ + Q KE I + G+ + Q I Q ++E L++NLTL ++ E + ++ E
Sbjct: 984 ILQLSECEQHKEKINKEMGI-------MRQDIDTQKIQERWLQDNLTLRKRNEELKEVEE 1036
Query: 1061 ELK-----LSEIMISDLTKYHHTLE---NCVIKYHS----------QKMRSINRLIREYW 1102
E K + ++ + + H LE + + + HS +++ + +RE
Sbjct: 1037 ERKQHLKEMGQMQVLQMKNEHQELESKIDNIKRNHSLATGRQTGYEEEIIRFKKELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLA 1216
Query: 1211 I---------------------------------------SDQKNFQLIVITHDEEFIEN 1231
+ S Q+NFQL+VITHDE+F+E
Sbjct: 1217 LAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVEL 1276
Query: 1232 L 1232
L
Sbjct: 1277 L 1277
>gi|73971132|ref|XP_531901.2| PREDICTED: DNA repair protein RAD50 [Canis lupus familiaris]
Length = 1312
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 355/1338 (26%), Positives = 677/1338 (50%), Gaps = 143/1338 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++L+ N + + V R+
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLRFRDVNGELIAVQRA 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + ++ L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEREAEIASQLMNDFAEKETLKQEQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L++ E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELRNVKYELQQLEGSSDRILELDQELSKAERELSKAEKNSNVEVLKTEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDITIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+ DLD QV +++EK+++L+T SK+E + + E++Q L
Sbjct: 809 IAQQAAKLQGL-----DLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLIQDQQEQIQYL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ N++ S++L + + +E++ EL E+++ +++P+ET L Q
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQSLSREIKDAKEQLSPLETILEKFQ 923
Query: 948 SELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQ 1005
E + L KK K+ ++ K+ D ++++ + +I NY + G + ++
Sbjct: 924 QEKEELINKKNKSNKIAQD--KMNDIKEKVKNIHGYMKDIENYIQDG---KDDYKKQKEN 978
Query: 1006 KLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL---------- 1048
+LNQ +IA+ CE+ IN Q I Q ++E L++NLTL
Sbjct: 979 ELNQ----VIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEV 1034
Query: 1049 ----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLI 1098
+ + + + NE KL E + D K +H+L K + +++ R +
Sbjct: 1035 EEERKQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHSLAIGRQKGYEEEIIHFKREL 1092
Query: 1099 REYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1093 REPQFRDAEEKHREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWR 1152
Query: 1150 RIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLI 1206
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LI
Sbjct: 1153 STYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLI 1212
Query: 1207 IRLFI---------------------------------------SDQKNFQLIVITHDEE 1227
IRL + S Q+NFQL+VITHDE+
Sbjct: 1213 IRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDED 1272
Query: 1228 FIENLTAIDRAYVVRIVR 1245
F+E L + YV + R
Sbjct: 1273 FVELLGRSE--YVEKFYR 1288
>gi|326928755|ref|XP_003210540.1| PREDICTED: DNA repair protein RAD50-like [Meleagris gallopavo]
Length = 1312
Score = 418 bits (1075), Expect = e-113, Method: Compositional matrix adjust.
Identities = 364/1332 (27%), Positives = 669/1332 (50%), Gaps = 153/1332 (11%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MAKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNLFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISALGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + ++ E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQGMKVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K Q I +N + S E + +IE + P+ L + E+N++ VMS
Sbjct: 214 KQNKEKAQEIQDNLANTEAQLSASKENIKSIESQLDPLKSSLAAV---EKNLAKVMSLDN 270
Query: 294 QTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
K E R +++ +L+ ++++F G +L+ + + + EK L + +R
Sbjct: 271 DVKALESRRRQMEKDNQDLQQKMEKVFQGTDEQLRDRYKNHQRTVKEKEKRLSDCKRELD 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHK---KLNDTLKTKLNNLADTLCLDTTAKSQ 408
+ +E ++ + +E ++ G+L+ + H+ K+ D+L + +L+ L LD ++
Sbjct: 331 RASKECQRFNNEKSELLIERGRLQLQADRHQEHIKVRDSL---IQSLSAQLELDGFEQAP 387
Query: 409 YTPEEGEGLIKMSQTTIDKYLSDIKI---LERTFSDNENTKQAEINALIVEKVELESKIK 465
+ + + + ++ SD + L R F+ E KQ +I+ + K LE I
Sbjct: 388 FNDRQ---IAVFHELLKERQKSDTEAANQLMREFTQKEAMKQKQIDEIRDRKTGLERTI- 443
Query: 466 SFKQQIEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
K I+ ++ +L NV ++ ++ S + L ++ + E+++ ++ + + L+ E
Sbjct: 444 DLKSDIQNKRQAELKNVKYELRQLEGSSDRIVELDQEIIKTEHELEKAERNSNVETLEQE 503
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
++ ++ L+ L +D E+ L T+ +++ LK K K I +K RH
Sbjct: 504 VQTLQNEKINLDKVLRRLDQEMEQLNLHTTTITQMEMLKKDKADKEEQIRKVKLRHSEEL 563
Query: 585 HLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKR 644
LL P K L+ L + +IN + K L + E + S LR ++
Sbjct: 564 TLLLGYFPN---KKQLEDWLHGKSTEINETRNKHALLNKQLASAEQQKNYISAELRKKEE 620
Query: 645 TLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPR 703
L+ ++ V GS+ F+ L+++ E++R ++ +++ +++ +I +L EEN+
Sbjct: 621 QLSSYEAKLFDVCGSQDFDSNLNKLQDEIERSSKQRAVLAGATAVYSQFITQLTEENQSC 680
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CP+C R F+++ + +++ L++K++ P++ + + + + K++ + LKP+ + +
Sbjct: 681 CPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTEFELKKREKKRDEMMGLKPIRQTVA 740
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIR 823
+LQ+ DIP LR++L + + KGE+++ +T L+T ++++ A + D+TL+++
Sbjct: 741 ELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLLQTVLSEKEGANACLQDITLMERYQT 800
Query: 824 ELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNS 879
++ ++R++ +QE+K+ GVDL+ QV +++EKK+ +T SKIE Q
Sbjct: 801 DIRDVERKIAQQEAKL-----LGVDLNRTVLQVSQEKQEKKHLWDTVTSKIELNQKMKQE 855
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAP 938
++Q L+ N++ +++L + + LE++ EL + S+Y+ E++E ++ P
Sbjct: 856 QQNQIQELKSTVNELRAEKLQISSSLQRRQQLEEQTVELTTEVQSLYR-EIKEAKEQIFP 914
Query: 939 IETQL-NLAQSELD------ALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKR 991
++ L L Q + D A KE ++K+N K++D K ++E++ + K+
Sbjct: 915 LDATLEKLQQDKEDLINKRTASNKEIQEKMNGIKEKVKDINKYMKEIESYIQQGKEEYKK 974
Query: 992 GTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEK 1051
+L + + ++KE I + + I Q I Q ++E L++NLTL ++
Sbjct: 975 QKECELDEVNSQLAACEKQKEKISKEMEI-------IRQDIDTQKIQERWLEDNLTLRQR 1027
Query: 1052 KE-------------------AVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMR 1092
E V +L E K E I L + HH + + Q +R
Sbjct: 1028 NEELKRVEDDIKQLVKEMGEMKVPQLKNEQKHFEEKIEALKRNHHVAQGRQRGFEEQIVR 1087
Query: 1093 SINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRL 1143
+ +RE + + K E+MI DL Y+ L+ ++ +HS KM+ IN++
Sbjct: 1088 -FKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHSMKMQEINKI 1146
Query: 1144 IREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQR 1200
IR+ W Y+G DI+YI I +D + S+KRR+YNYRVV K DMR RCSAGQ+
Sbjct: 1147 IRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQK 1206
Query: 1201 VLACLIIRLFISD---------------------------------------QKNFQLIV 1221
VLA LIIRL +++ Q+NFQL+V
Sbjct: 1207 VLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLLV 1266
Query: 1222 ITHDEEFIENLT 1233
ITHDE+F+E L+
Sbjct: 1267 ITHDEDFVELLS 1278
>gi|149726377|ref|XP_001504492.1| PREDICTED: DNA repair protein RAD50 isoform 1 [Equus caballus]
Length = 1312
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 352/1330 (26%), Positives = 675/1330 (50%), Gaps = 151/1330 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESG 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ ++ ++ G+L+ E+ H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSDLLVEQGRLQLQEDRHREHVRARDSLIQSLASQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + ++ L +++ E+ KQ +I+ + +K +EL+S+I + KQ
Sbjct: 398 KLVRERQEREAETASHLMNDYAEKESLKQKQIDEIRDKKTGLGRIIELKSEILTKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + KS + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKSSNVEMLKTEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + ++ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLARLNKELASAEQNKNHINIEIKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ F+ +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L PV ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPVRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L +E++A D++++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDVEEQETLLGVIMPEEESAKVCLTDVSIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+ DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQGL-----DLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKFIQDQQEQIQYL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G
Sbjct: 923 QQEKEELINKKNSSNKIAQD--KMNDIKEKVKNIHNYVKDIENYIQDGK----------- 969
Query: 1005 QKLNQRKED----IIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL----- 1048
++KED +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 970 DDYKKQKEDELNKVIAQLSECEKHKEKINTDMRIMRQDIDTQKIQERWLQDNLTLRKRNE 1029
Query: 1049 ---------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1093
+ + + + NE +L E + D K +H+L K + +++
Sbjct: 1030 ELKEVEEERKHHLKEMGQMQVLQMKNEHQELEEKI--DNVKRNHSLAIGRQKGYEEEIIH 1087
Query: 1094 INRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLI 1144
+ +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++I
Sbjct: 1088 FKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKII 1147
Query: 1145 REYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
R+ W Y+G DI+YI I +D + ++KRR YNYRVV K DMR RCSAGQ+V
Sbjct: 1148 RDLWRSTYRGQDIEYIEIRSDADENVSAADKRRNYNYRVVMLKGDTALDMRGRCSAGQKV 1207
Query: 1202 LACLIIRLFI---------------------------------------SDQKNFQLIVI 1222
LA LIIRL + S Q+NFQL+VI
Sbjct: 1208 LASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVI 1267
Query: 1223 THDEEFIENL 1232
THDE+F+E L
Sbjct: 1268 THDEDFVELL 1277
>gi|170035857|ref|XP_001845783.1| DNA repair protein RAD50 [Culex quinquefasciatus]
gi|167878307|gb|EDS41690.1| DNA repair protein RAD50 [Culex quinquefasciatus]
Length = 1292
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 369/1351 (27%), Positives = 653/1351 (48%), Gaps = 111/1351 (8%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ + +L I GIR+F + V ++FQ PLTLIVG+NGCGKTTIIEC+K+ LT E P G
Sbjct: 1 MSTICKLEIRGIRSFGVESEDVQKIKFQSPLTLIVGQNGCGKTTIIECLKYGLTGEVPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
GK FVH DP+I E+ VKL + V RS
Sbjct: 61 TDRGKAFVH--------------------DPKIFNTVESLGQVKLMVKDFTGNRVTATRS 100
Query: 119 LLLSNKNGK--DNCATRDTTISRKIFATGVQKNLGCLQQESVL-EMCNLIGVSKAILNNV 175
+ +S+K T D+ ++ + ATG +K L + + +M + +GVSKAI+NNV
Sbjct: 101 MKVSHKGNTKLPKFETLDSAVTIEDGATGEKKTLSRPRVADINNDMADAMGVSKAIINNV 160
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALES-IKIQR---DRLRKEIPEIKAHY 231
IFCHQE+S+WPL+E K++K+ FD IF+ T+YNK +E IKI + DR +++ ++K
Sbjct: 161 IFCHQEDSNWPLEEPKELKKKFDAIFETTEYNKVIEKLIKISKEYNDRQKEKAGDLKLLE 220
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
N K +A+ K+ +K+ + +E+ +E S+KPI+E++ Q+ ER+ S +
Sbjct: 221 ----NIKSQAEMKQLQAEKAERKKGEMRKEVDGLEGSLKPIHERMEQIARIERDYSKLKQ 276
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
Q K++ ++ N L S I+ LFSG AEL+ ++ F+ ++ K SEL + E +
Sbjct: 277 QEIEFKSKIHTKEDQQNNLRSKIRTLFSGSLAELEQEIRSFQESMGGKRSELRDAESDLA 336
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+EK + + E + + L + + L K+ L L L + + +
Sbjct: 337 SRKSQEKSLQSKLQEMESRRVHLIAKRQQEQDLGGDRAGKIVELCGRLKLPASGDYEGSA 396
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ E + + I S ++ + + + + Q I+ L +K +LES ++ Q +
Sbjct: 397 VDVESALAAIKHGIRSEESQVQAMAKGHDEADQAAQKAIDRLREDKAKLESDVRMKGQMV 456
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
++ T+I + +S TL+ + ++ ++ E + + + D +K + +
Sbjct: 457 ADFAREKAKTQTEIAAIERSAETLKKIVGEIEKLEREYETQKANSNVDGMKRTLVEKKAK 516
Query: 532 RNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF-DM 590
R EL+ +L ++ +IS L A E+ + + + A+ ++ +H LF
Sbjct: 517 REELQVKLDKVEEQISALDAIAAKATELGLKEQQLNGREAEFRRVRNKHSDNLKRLFPSK 576
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
E NFK ++ + I ++ E A + + +E + + L +R L E
Sbjct: 577 TIESNFKRAVQDLYDGLQRQIKQLNESTRAAQAIVTEMETTRRSQKRDLDRLERELTENR 636
Query: 651 DRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRF 710
+++ +P+E+ L ++ ++ R E S + L+ YI ++E++ CPLC +
Sbjct: 637 EKIYAACQGQPYEEVLSKLKEKITRNNLEHGEQRSAEILYRKYISRIEDDSC-CPLCHKE 695
Query: 711 FESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRS-------LQELKPVYENIM 763
+ + +L +I+ +PE+ I+ L KQ +S L L+P E +
Sbjct: 696 M-AGSDAQDISTELSDEIRRLPEK-------IEMLEKQLKSDQTRYDRLLALQPYSERVE 747
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIR 823
K Q +IP L+ +L E E+ + + +L++ + A+ P + S+ GD+++LD++ R
Sbjct: 748 K-QTIEIPKLKQQLQETEQRLTQASSDLEEYQMAVLEPNSSVALINSIHGDMSILDESAR 806
Query: 824 ELNTLQR---ELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSH 880
+L+ +++ EL ++ + + + V LD + +++ + EL R+ I+ Q R++
Sbjct: 807 DLHRMRKGVAELRQELADKTPGGGSAVSLDDMKLEREVLRGELRAERNSIDEMQNRIDLE 866
Query: 881 NEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIE 940
E+L L ++ N + K++ +Q L + + ++ EL ++E+E+ R++ P+
Sbjct: 867 TERLNGLHQRFNQMKEKKIQLQESVQSLDTKKAKEVELGEKIVACKSEMEDAERRLGPVR 926
Query: 941 TQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAAL 1000
L + K E++ KL + ++++ + E+ R+ E+ + ++A +
Sbjct: 927 ASLAKEEEAKVKAKGENRVKLGKAQSELEGLKRMEGEIVRLGRELDQLARLNLTDEIAKM 986
Query: 1001 RESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNE 1060
+ +Q++ + + A I+ + + I+NQ L E D +N L + A L E
Sbjct: 987 KRKLQEVTDDIKKVAASIEEKSTKIDTLKKEISNQDLIERDFLDNRDLKKLTAETAVLQE 1046
Query: 1061 ELKLSEIMISDLTKYHHTLE-NCVIKYHS--QKMRS-INRLIREYWTRIYQLK------- 1109
+L I DL + E N +++ Q RS I I E ++ L+
Sbjct: 1047 KLDTLLRSIGDLDAPNVVQERNKLLEQRDSIQAKRSEITGQIAELENQLKALRKELDRPE 1106
Query: 1110 ----------------LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
+ + +ISD+ KY + LE ++KYH++KM INR I W IY+
Sbjct: 1107 FRNAVANFHKTFAESVVLKKIISDILKYRNALEWALMKYHAEKMEQINRSIYSLWRDIYR 1166
Query: 1154 GNDIDYISIAADVGT----GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRL 1209
GNDIDYI I + + EKRR YNYRVVQ KN +E DMR RCSAGQ+VLA LIIR+
Sbjct: 1167 GNDIDYIRIKTEDESRETKAVEKRRQYNYRVVQAKNDVEIDMRGRCSAGQKVLASLIIRM 1226
Query: 1210 FISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTN 1269
+++ + V+ D E T +DR + +L E+ R
Sbjct: 1227 ALAETFSNNCGVMALD----EPTTNLDRENIA-------SLCESLRR------------- 1262
Query: 1270 LDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
I + NF LI+ITHDEEF+ L D
Sbjct: 1263 --IVTEREGGNFLLIIITHDEEFVTKLEKFD 1291
>gi|328781019|ref|XP_003249903.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50 [Apis
mellifera]
Length = 1377
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 376/1364 (27%), Positives = 684/1364 (50%), Gaps = 144/1364 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L I GIRNF +K +++F RPLTLI+G NG GKTTIIE +KFA E+P G+
Sbjct: 1 MSRIRRLSIRGIRNFGDEKEEALIKFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK+F+H DP + +++ + +T + R++
Sbjct: 61 DRGKSFIH--------------------DPTLSTTSSVRGVIRAEIIDVVGNTYTICRTI 100
Query: 120 LLSNKNGKDNCATRDTTISR--KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
S K T D+ +SR K + C ++ L + +GVSK IL+ VIF
Sbjct: 101 E-STKANVTRFKTLDSALSRINKDTKEVISITNRCTNVDTELTLA--MGVSKPILDYVIF 157
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEI---PEIKAHYQA 233
CHQE+ SWP +GKK+KE FDEIFD+ K+NKALESI K+ +D L++ + E K +YQ
Sbjct: 158 CHQEDLSWPFQDGKKLKERFDEIFDSAKFNKALESIMKLIKD-LKQRVNILKEQKQNYQL 216
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
+N E K+ + +N ++ + S ++ + ++P+ +K+ +L + + + ++
Sbjct: 217 IVN---EVIDKETKLEDNKKRLENSKIKIEEFNKELEPVIQKIKKLEKMDVEYKDLQSEQ 273
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQERLKSQ 352
+ KK E DM ++ + L+ ++ +F G +L ++ + L K +E+ E +++L+
Sbjct: 274 KRKKAEYDMFKQQLDNLKEDLQNIFEGTTEKLLKEIESYDEKLIGKINEIDEFKKKLRDI 333
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKK--------LNDTLKTKLNNLADTLCLDTT 404
+E S+ NE ++ G L + + H+K LN++L + N+ D
Sbjct: 334 AEKESTISNKLANE-RVTNGSLRQQIKDHEKKVILRNQILNESLSSWNLNIVD------- 385
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
S + E K Q + + ++ + + E Q ++AL + ++L+++
Sbjct: 386 --SNVSELEVIAFTKRLQEKMRELEHKLEENKIKREEEEKELQKVVDALRDKYLKLDTEK 443
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
+ +I +K++ + I +++ + L +++KL +V I QL+ SL+ D +K E
Sbjct: 444 NLKENEIIETRKEIDKMKLDIMQLSAESNKLNFIESKLQKVQIRIQQLNDSLNVDTMKKE 503
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
I+ I+ RNE++ L ID EI++L Q+ E++ K+ K +I LK +H+
Sbjct: 504 IDDKIKIRNEMDILLNTIDEEITLLLKQSSLQTELELNKSTLVIKEKEIEKLKNKHEEKI 563
Query: 585 HLLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
L D+ + + KN+ D + +I I + I +E + TLE +S+ L+++
Sbjct: 564 ISLLDIKDLSQIKLKNNFDIVQKELINEIESINQKIRTEEHQIATLETTISHIEHELQNK 623
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEP 702
K+ + +++ L+ K F++ L + ++K Q++ M + Y+ +L P
Sbjct: 624 KKEINLNKEKISLICSYKNFDEVLLLQSKKVKDFQDKRGMFAHQSAAYKEYMKQLRNTNP 683
Query: 703 RCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNN-KKTHIDQLCKQQRSLQELKPVYEN 761
CPLC R F+ ++ L+ +++T+I+ P + +K I Q K + LQ LKPV E
Sbjct: 684 CCPLCHRGFDKIETITTLLKEMETEIENHPNRLKXCEKELIIQQEKYDKMLQ-LKPVVER 742
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
I++L++ ++ L S L + + + E++ +LKT P+ K + D+ L D
Sbjct: 743 IIQLEEIELEKLMSNLEKFKNKLNESRTIAIELKTKKSNPEKKLVMCKDIISDVMLWDTY 802
Query: 822 IRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNS 879
I ++ L++ ++ ++ +G++ T L + +++E K L R IE Q +N
Sbjct: 803 IDDIFKLKQIIDNFHIRMTAAGIK-TKRSLQEAQTEREELKISLKKIRENIERLQFEINM 861
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
+NEKL + Q+++N +H +QL +Q LK L+D + L + ++ L K+
Sbjct: 862 YNEKLHNNQQEQNTLHKEQLKIQSDMQKLKELKDNQEILYLKEISLGKSIDTLREKITLS 921
Query: 940 ETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA 999
ET+LN +L+ KK++ +K + I + +++L ++++++ ++ ++ R L
Sbjct: 922 ETELNSGFDKLEKKKKDNWEKQETDRKLITEGSRRLSDLQKMQDDVDSFIYRKIPESLEC 981
Query: 1000 LRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN 1059
++ + ++ K+ E TIN++ + + Q + + +L +N+ L E +E + L
Sbjct: 982 SESKIKSYEKLLNELFCKKNDIETTINKLKEEMTRQEVRKRELSDNVKLREIQEIINNLQ 1041
Query: 1060 EEL-----KLSEIMISDLTKYHHTLEN---------CVIKYHSQKM-RSINRLIRE---- 1100
E+ KL+ I S++ L++ +IK + +++ R++ + ++E
Sbjct: 1042 EQYSNIKEKLNTINYSEIFDEWQNLQSREQTILRQKNIIKGNQEELERTVQQYVQELKKD 1101
Query: 1101 --------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIY 1152
Y ++ +L + E I +L +Y L+ +I+YH ++M ++NR+I++ W +Y
Sbjct: 1102 IYKQAHKNYKSKCIELTVVEESILNLKEYSKVLDTAMIQYHEERMATVNRIIKQLWKLVY 1161
Query: 1153 QGNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G D I I D G G KR TYNY+++Q K+G E DM+ RCSAGQ+VLA +IIRL
Sbjct: 1162 TGTDTTSIEIRTDATEGIGGTKR-TYNYKLIQMKHGHEIDMKGRCSAGQKVLASIIIRL- 1219
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
ALAETF ++CGI ALDEPTTNL
Sbjct: 1220 --------------------------------------ALAETFCKDCGILALDEPTTNL 1241
Query: 1271 DIKNASD---------------QKNFQLIVITHDEEFIENLTAI 1299
D +NA QKNFQLIVI+HDE+F+ L +
Sbjct: 1242 DQENADSLANTLATVVKLRSQHQKNFQLIVISHDEKFLFKLAEL 1285
>gi|363739211|ref|XP_414645.3| PREDICTED: DNA repair protein RAD50 [Gallus gallus]
Length = 1312
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 367/1340 (27%), Positives = 674/1340 (50%), Gaps = 171/1340 (12%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MAKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G +FVHDP++ + + A ++LQ + + + V RS
Sbjct: 61 ---------------------TKGNSFVHDPKVANETDVRAQIRLQFRDVSGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISALGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + ++ E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQGTKVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERN-MSVMSTQY 293
K+ K Q I +N R+ S E + +IE + P+ L + E+N M VMS
Sbjct: 214 KQNKEKAQEIQDNLANREAQLSASKENIKSIESQLDPLKSSLAAV---EKNLMEVMSLDN 270
Query: 294 QTKKTERDMIQ--ESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
K E IQ + +L+ ++++F G +L+ + + + + EK L + +R
Sbjct: 271 NVKALESRRIQMEKDNQDLQRKMEKVFQGTDEQLKDRYHNHQRTVKEKEKRLSDCKRELD 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHK---KLNDTLKTKLNNLADTLCLDTTAKSQ 408
+ +E ++ ++ +E ++ G+L+ + H+ K+ D+L + L+ L LD ++
Sbjct: 331 RASKECQRFNSEKSELLIERGRLQLQADRHQEHIKVRDSL---IQALSAQLELDGFEQAP 387
Query: 409 YTPEEGEGLIKMSQTTIDKYLSDIKI---LERTFSDNENTKQAEINALIVEKVELESKIK 465
+ + + + ++ SD + L R F+ E KQ +I+ + K LE I
Sbjct: 388 FNDRQ---IAVFHELLKERQKSDTEAANQLMREFTQKEAMKQEQIDKIRDRKTGLERSI- 443
Query: 466 SFKQQIEGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
K I+ + +L NV ++ ++ S + L ++ ++ E+++ ++ + + L+ E
Sbjct: 444 DLKSDIQNKRLAELKNVKYELCQLEGSSDRIAELDREIVKMEHELEKAERNSNVETLEQE 503
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
++ ++ L+ L +D E+ L T+ +++ LK K K I +K RH
Sbjct: 504 VQTLQNEKINLDKVLRRLDQEMEQLNLHTTTITQMEMLKKDKADKEEQIRKVKLRHSEEL 563
Query: 585 HLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKR 644
LL P K L+ L + +IN + K L + E + S LR ++
Sbjct: 564 TLLLGYFPN---KKQLEDWLHGKSTEINETRSRHALLNKQLASAEQQKNYISAELRKKEE 620
Query: 645 TLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPR 703
L+ ++ V GS+ F+ L+++ E+++ ++ +++ +++ +I +L EEN+
Sbjct: 621 QLSNYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSC 680
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ + LKP+ + ++
Sbjct: 681 CPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKKREKKRDEMIGLKPIRQTVV 740
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIR 823
+LQ+ DIP LR++L + + KGE+++ +T L+T ++++ A + D+TL+++
Sbjct: 741 ELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLLQTVLSEKEGANACLQDITLMERYQT 800
Query: 824 ELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNS 879
++ ++R++ +QE+K+ GVDL+ QV +++ KK+ +T SKIE Q
Sbjct: 801 DIRDVERKIAQQEAKL-----LGVDLNRTVLQVSQEKQAKKHLWDTVTSKIELNQKMKQD 855
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
++Q L+ N++ +++L + + LE++ EL E++E +V P+
Sbjct: 856 QQNQIQELKSTVNELRAEKLQISSSVQRRQQLEEQTVELTTEVQSLSREIKEEKEQVFPL 915
Query: 940 ETQL-NLAQSELD------ALKKEHKKKLNEEGAKIQD---YTKQLEEVKRIKLEILNYT 989
+ L L Q + D A KE ++K+N K++D YTK++E NY
Sbjct: 916 DATLEKLQQDKEDLINKRTASNKEIQEKMNAIKEKVKDINKYTKEIE----------NYI 965
Query: 990 KRGTLTQLAALRESVQKLNQRKEDIIAKRGV-CERTINEIN-------QSIANQSLEEID 1041
++G +E +K + + D + + V CE+ +I+ Q I Q ++E
Sbjct: 966 QQG--------KEEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQERW 1017
Query: 1042 LKNNLTLLEK-----------KEAVAKLNE--------ELKLSEIMISDLTKYHHT---- 1078
L++NLTL E+ KE V K+ E E K E I L + HH
Sbjct: 1018 LEDNLTLRERNKELKGVEDNIKELVKKMGEMKVPQLKNEQKHLEEKIEALKRNHHVALGR 1077
Query: 1079 ---LENCVIKYHSQKMRSINRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHS 1134
E ++++ + S + E + + ++ +E++ DL Y+ L+ ++ +HS
Sbjct: 1078 QRGFEEEIVRFKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHS 1137
Query: 1135 QKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDM 1191
KM+ IN++IR+ W Y+G DI+YI I +D + S+KRR+YNYRVV K DM
Sbjct: 1138 MKMQEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDM 1197
Query: 1192 RNRCSAGQRVLACLIIRLFISD-------------------------------------- 1213
R RCSAGQ+VLA LIIRL +++
Sbjct: 1198 RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRS 1257
Query: 1214 -QKNFQLIVITHDEEFIENL 1232
Q+NFQL+VITHDE+F+E L
Sbjct: 1258 RQRNFQLLVITHDEDFVELL 1277
>gi|281348671|gb|EFB24255.1| hypothetical protein PANDA_000728 [Ailuropoda melanoleuca]
Length = 1311
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 354/1334 (26%), Positives = 679/1334 (50%), Gaps = 136/1334 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I N + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITNKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIQARDSLIQSLAAQLELDGFERGPFSERHIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
++ + ++ L F++ E KQ +I+ + +K+ L +I K +I K+ +
Sbjct: 398 RLVRERQEREAEIASQLMNDFAEKETLKQKQIDEIRDKKIGL-GRIIELKSEILSKKQNE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L++ E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LRNVKYELQQLEGSSDRILELDQELSKAERELSKAEKNSNVEALKTEVISLQNEKADLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE++LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFENDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L PV ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+ DLD QV +++EK+++L+T SK+E + + E++Q L+ N
Sbjct: 814 AKLQGL-----DLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLIQDQQEQIQHLKSTTN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+++ E+++ +++P+ET L Q E +
Sbjct: 869 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLFR-EIKDAKEQLSPLETTLEKFQQEKE 927
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
L KK K+ ++ K+ D ++++ + +I NY + G + ++ +LN+
Sbjct: 928 ELINKKNKSNKIAQD--KMNDIKEKVKNIHGYMKDIENYIQDG---KDDYKKQKENELNK 982
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
++A+ CE+ IN Q I Q ++E L++NLTL
Sbjct: 983 ----VMAQLSECEKHKENINTDMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ R +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHSLAIGRQKGYEEEIIHFKRELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+ A LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKA-ASLIIRLA 1215
Query: 1211 I---------------------------------------SDQKNFQLIVITHDEEFIEN 1231
+ S Q+NFQL+VITHDE+F+E
Sbjct: 1216 LAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVEL 1275
Query: 1232 LTAIDRAYVVRIVR 1245
L + YV + R
Sbjct: 1276 LGRSE--YVEKFYR 1287
>gi|426229215|ref|XP_004008686.1| PREDICTED: DNA repair protein RAD50 [Ovis aries]
Length = 1312
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 360/1339 (26%), Positives = 679/1339 (50%), Gaps = 145/1339 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + ++
Sbjct: 218 EKACEIRDQITSKEAQLTSSREIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALES 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + +K L F+ E KQ +I+ + +K +EL+S+I + KQ
Sbjct: 398 KLVRERQEKESETASQLLNDFTRKEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 455 ---NELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVETLKTEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTAARTQMEMLNKDKADKDEQIRKIKYRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINIELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRGF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGAIIPEEESAKVCLTDVTIMERLQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+ DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQGL-----DLDRSVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +++P+ET L
Sbjct: 864 KSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQLSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ KI + ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELVNKKNTSHKIAQD--KINEIKEKVKNIHSYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL--------- 1048
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 979 -ELNK----VIAQISECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1049 -----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+ + + + NE KL E + D K +H+L K + +++ +
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHSLAIGRQKGYEEEIIHFKKE 1091
Query: 1098 IREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1092 LREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLW 1151
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA L
Sbjct: 1152 RSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASL 1211
Query: 1206 IIRLFI---------------------------------------SDQKNFQLIVITHDE 1226
IIRL + S Q+NFQL+VITHDE
Sbjct: 1212 IIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDE 1271
Query: 1227 EFIENLTAIDRAYVVRIVR 1245
+F+E L + YV + R
Sbjct: 1272 DFVELLGRSE--YVEKFYR 1288
>gi|149052578|gb|EDM04395.1| RAD50 homolog (S. cerevisiae) [Rattus norvegicus]
Length = 1312
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 353/1330 (26%), Positives = 670/1330 (50%), Gaps = 151/1330 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVLVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKSKKTEFKTLEGVITRIKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLRQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + E ++P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLASSREIVKAYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLSKEAR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQERAELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
++ + ++ L +D E KQ +++ + +K +EL+++I + KQ
Sbjct: 398 ELVRERQEREAKTASQLLSDLTDKEALKQRQMDEMRDKKSGLGRMIELKTEILTKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + LK EI ++
Sbjct: 455 ---TELRNVRNELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEILNLQSEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRNLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ ++++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + +++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR++L + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ GVDLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ + N++ S++L + + +E++ EL TE++ L R++ + Q+N +
Sbjct: 864 KSKTNELKSEKLQIATNLQRRQQMEEQTVEL-------STEVQSLNREIKDAKEQINPLE 916
Query: 948 SELDALKKE-----HKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG----TLTQ 996
L+ L++E H+K + + A KI D ++++ + +I NY + G +
Sbjct: 917 IALEKLQQEKEELIHRKNTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQK 976
Query: 997 LAALRESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL----- 1048
L E V +LN+ KE I + G + Q I Q ++E L++NLTL
Sbjct: 977 ETELNEVVIQLNECDKHKEKINKEMGT-------MRQDIDTQKIQERWLQDNLTLRKRRE 1029
Query: 1049 ---------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1093
+ + + + NE KL E + D K +H+L K + +++
Sbjct: 1030 ELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DTIKRNHSLALGRQKGYEEEILH 1087
Query: 1094 INRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLI 1144
+ +RE R + K E+MI DL Y+ TL++ ++K+HS KM IN++I
Sbjct: 1088 FKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKMEEINKII 1147
Query: 1145 REYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
R+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+V
Sbjct: 1148 RDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKV 1207
Query: 1202 LACLIIRLFI---------------------------------------SDQKNFQLIVI 1222
LA LIIRL + S Q+NFQL+VI
Sbjct: 1208 LASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVI 1267
Query: 1223 THDEEFIENL 1232
THDE+F+E L
Sbjct: 1268 THDEDFVELL 1277
>gi|344266003|ref|XP_003405070.1| PREDICTED: DNA repair protein RAD50 [Loxodonta africana]
Length = 1312
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 357/1327 (26%), Positives = 680/1327 (51%), Gaps = 145/1327 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELLAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I N + S E + + E + P+ +L ++ + + + + + ++
Sbjct: 218 EKACEIRDQITNKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALES 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER------LKSQ 352
+ +++ +ELE ++++F G +L + + EK L + +R +S+
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYRNHQRTVREKERRLVDCQRELEKLNKESR 337
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPE 412
+ +EK S + + +++L + +R +E H + D+L + +LA L LD + ++
Sbjct: 338 LLNQEK-SELLVEQGRLQL-QADRYQE-HIRARDSL---IRSLATQLELDGFERGPFSER 391
Query: 413 EGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIE 472
+ + K+ + + L F++ E KQ +I+ + +K+ L +I K +I
Sbjct: 392 QIKNFHKLVRERQEGEAETANQLMNDFAEKEALKQKQIDEIRDKKIGL-GRIIELKSEIL 450
Query: 473 GNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
K+ +L NV ++ ++ S + L+ +L + E+ + K+ + LK E+ + +
Sbjct: 451 SKKQSELKNVKYELQQLEGSSDRILELEQELTKAERELSKAEKNSSVEALKTEVMSLQNE 510
Query: 532 RNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMI 591
+ +L+ L +D E+ L T +++ L K K I +K RH L
Sbjct: 511 KADLDRTLRKLDQEMEQLNHHTTTRTQMEMLSKDKADKDEQIRKIKSRHGDELTSLLGYF 570
Query: 592 PEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMD 651
P K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D
Sbjct: 571 PN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYED 627
Query: 652 RMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRF 710
++ V GS+ FE +LDR+ ++++ ++ +M+ +++ +I +L +EN+ CP+C R
Sbjct: 628 KLFDVCGSQDFESDLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRV 687
Query: 711 FESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDI 770
F+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +I
Sbjct: 688 FQTETELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDDMLGLVPMRQSIVDLREKEI 747
Query: 771 PSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQR 830
P LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R
Sbjct: 748 PELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERLQMELKDVER 807
Query: 831 ELERQESKISGMRSTGVDLDQVLAQ----QKEKKNELNTFRSKIESGQTRLNSHNEKLQS 886
++ +Q +K+ G+DLD+ + Q ++EK+++L+T SKIE + + E++Q
Sbjct: 808 KIAQQAAKLQ-----GIDLDRTVQQVNQDKQEKQHKLDTVSSKIELNRKLIQDQQEQVQQ 862
Query: 887 LQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNL 945
L+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 863 LKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEK 921
Query: 946 AQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG-------TLTQ 996
Q E + L KK K+ ++ K+ D ++++ ++ +I NY + G T+
Sbjct: 922 FQQEKEELINKKNKSNKIIQD--KLNDIKEKVKNIQSYVKDIENYIQDGKDDYKKQKETE 979
Query: 997 LAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL-------- 1048
L + + + ++KE I + G+ + Q I Q ++E L++NLTL
Sbjct: 980 LNKVITQLSECEKQKEKINKEMGI-------MRQDIDTQKIQERWLQDNLTLRKRNEELK 1032
Query: 1049 ------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1096
+ + + + NE KL E + + K +H+L K + +++ +
Sbjct: 1033 EVEEERKQHLKEMGQMQVLQMKNEHQKLEEKI--ETIKRNHSLALGRQKGYEEEIIHFKK 1090
Query: 1097 LIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREY 1147
+RE R + K E+MI DL Y+ TL+ ++K+HS KM IN++IRE
Sbjct: 1091 ELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIREL 1150
Query: 1148 WTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLAC 1204
W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA
Sbjct: 1151 WRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLAS 1210
Query: 1205 LIIRLFI---------------------------------------SDQKNFQLIVITHD 1225
LIIRL + S Q+NFQL+VITHD
Sbjct: 1211 LIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHD 1270
Query: 1226 EEFIENL 1232
E+F+E L
Sbjct: 1271 EDFVELL 1277
>gi|332309233|ref|NP_001193797.1| DNA repair protein RAD50 [Bos taurus]
gi|296485646|tpg|DAA27761.1| TPA: RAD50 homolog [Bos taurus]
Length = 1312
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 352/1336 (26%), Positives = 666/1336 (49%), Gaps = 139/1336 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + ++
Sbjct: 218 EKACEIRDQITSKEAQLTSSREIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALES 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
++ + +K L F E KQ +I+ + +K +EL+S+I + KQ
Sbjct: 398 RLVRERQEKEAETASQLLNDFVRKEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 455 ---NELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVETLKTEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEQIRKIKYRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINTELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRGF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGAIIPEEESAKVCLTDVTIMERLQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+ DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQGL-----DLDRSVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ N++ S++L + + LE++ EL E+++ +++P+ET L Q
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLHREIKDAKEQLSPLETTLEKFQ 923
Query: 948 SELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG-------TLTQLAAL 1000
E + L + KI + ++++ + +I NY + G T+L +
Sbjct: 924 QEKEELINKKNTSHRTAQDKINEIKEKVKNIHSYMKDIENYIQDGKDDYKKQKETELNKV 983
Query: 1001 RESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL------------ 1048
+ + ++ KE I + G+ + Q I Q ++E L++NLTL
Sbjct: 984 IAQLSECDKHKEKINKEMGI-------MRQDIDTQKIQERWLQDNLTLRKRNEELKEVEE 1036
Query: 1049 --------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1100
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1037 ERKQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHSLAIGRQKGYEEEIIHFKKELRE 1094
Query: 1101 YWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1095 PQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRST 1154
Query: 1152 YQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIR
Sbjct: 1155 YRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIR 1214
Query: 1209 LFI---------------------------------------SDQKNFQLIVITHDEEFI 1229
L + S Q+NFQL+VITHDE+F+
Sbjct: 1215 LALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFV 1274
Query: 1230 ENLTAIDRAYVVRIVR 1245
E L + YV + R
Sbjct: 1275 ELLGRSE--YVEKFYR 1288
>gi|335283461|ref|XP_003354322.1| PREDICTED: DNA repair protein RAD50 [Sus scrofa]
Length = 1312
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 351/1323 (26%), Positives = 671/1323 (50%), Gaps = 137/1323 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+ DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSLEIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRNVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L + K+ K T + I+R + V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCTQKSKKTEFKTLEGVITRTVHGEKVSISSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKSRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKRQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKEKRLVDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + +++LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIHSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + ++ L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEREAETASRLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELRNVKYELQQLEGSSDRILELDRELTKAEHELSKAEKNSNVETLKIEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEHIRKIKSRHSDVLSSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ I K L + E N ++ ++ + L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDKIAKLNKELASAEQNKNHIINEVKSKDEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
+LR+KL + ++ K ++++ T L +E++A D+T++++ EL ++R+
Sbjct: 749 ALRNKLQNVNRDIQSLKIDIEEQDTLLGAIIPEEESAKVCLTDVTIMERFQLELKDVERK 808
Query: 832 LERQESKISGMRSTGVDL----DQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ GVDL QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GVDLHRTIQQVNQEKQEKQHKLDTVASKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ N++ S++L + + LE++ EL Q E+++ +V P+ET L Q
Sbjct: 864 KSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLQREIKDAKEQVNPLETTLEKFQ 923
Query: 948 SELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQ 1005
E + L KK K+ ++ KI D ++++ + +I NY + G + +E+
Sbjct: 924 QEKEELINKKNTSSKIAQD--KINDIKEKVKNIHGYVKDIENYIQDGK-DEYKKQKET-- 978
Query: 1006 KLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAKL 1058
+LN+ +I + CE ++N Q I Q ++E L++NLTL ++ E + ++
Sbjct: 979 ELNK----VIVQLSECETHKEKVNKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEV 1034
Query: 1059 NEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIRE 1100
EE K + ++ + + H LE + K + +++ + +RE
Sbjct: 1035 EEERKQHLKEMGQMQVLQMKNEHQNLEEKIENIKRNHSLAIGRQKGYEEEIIHFKKELRE 1094
Query: 1101 ---------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
Y + ++ +E++ DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1095 PQFRDADEKYREMLIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRST 1154
Query: 1152 YQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LIIR
Sbjct: 1155 YRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIR 1214
Query: 1209 LFI---------------------------------------SDQKNFQLIVITHDEEFI 1229
L + S Q+NFQL+VITHDE+F+
Sbjct: 1215 LALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFV 1274
Query: 1230 ENL 1232
E L
Sbjct: 1275 ELL 1277
>gi|355715053|gb|AES05210.1| RAD50-like protein [Mustela putorius furo]
Length = 1311
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 353/1339 (26%), Positives = 679/1339 (50%), Gaps = 146/1339 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGHTFVHDPKVAQETDVRAQIRLQFRDVNGEVIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E +A + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQAELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEKKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIQARDSLIQSLATQLELDGFERGPFNERHIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + ++ L F++ E KQ +I+ + +K +EL+S+I + KQ
Sbjct: 398 KLVRERQEREAEIASQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L++ E+ + K+ + + LK E+ ++
Sbjct: 456 ----ELRNVKHELQQLEGSSDRILELDQELSKAERELSKAEKNNNVEALKTEVINLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNYHTTTRTQMEMLTRDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHVNNELKKKEERLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +L+R+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQDTLLGTIMPEEESAKVCLTDVTIMERLQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SK+E + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+++ E+++ +++P+ET +
Sbjct: 864 KSTTNELKSEKLHISTNLQRRQQLEEQTVELSTEVQSLFR-EIKDAKEQLSPLETTMEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG----TLTQLAAL 1000
Q E + + KK K+ ++ K+ D ++++ + +I NY + G + L
Sbjct: 923 QQEKEEIINKKNKSNKIAQD--KMNDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKENEL 980
Query: 1001 RESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL--------- 1048
+ V +LN+ KE+I G+ + Q I Q ++E L++NLTL
Sbjct: 981 NKVVAQLNEYEKHKENINKDMGI-------MRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1049 -----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+ + + + NE KL E + D K +H L K + +++ R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHDLAVGRQKGYEEEIIHFKRE 1091
Query: 1098 IREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+RE R + K E++I DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1092 LREPQYRDAEEKYREMLIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLW 1151
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA L
Sbjct: 1152 RNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASL 1211
Query: 1206 IIRLFI---------------------------------------SDQKNFQLIVITHDE 1226
IIRL + S Q+NFQL+VITHDE
Sbjct: 1212 IIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDE 1271
Query: 1227 EFIENLTA---IDRAYVVR 1242
+F+E L +D+ Y ++
Sbjct: 1272 DFVELLGRSEYVDKFYRIK 1290
>gi|197215656|gb|ACH53047.1| RAD50 homolog isoform 1 (predicted) [Otolemur garnettii]
Length = 1311
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 354/1334 (26%), Positives = 673/1334 (50%), Gaps = 136/1334 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGERVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLIDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLAIQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + +K L F++ E KQ +I+ + +K L +I K +I+ K+ +
Sbjct: 398 KLVRERQEKEAETANQLMNDFAEKEALKQKQIDEIRDKKTGL-GRIIELKLEIQSKKQHE 456
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L N ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 457 LKNAKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVEALKMEVISLQNEKVDLDR 516
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ + T +++ L K K I +K RH L P K
Sbjct: 517 TLRKLDQEMEQINHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 573
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 574 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLSSYEDKLFDVC 633
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 634 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLADENQSCCPVCQRVFQTEAE 693
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 694 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 753
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 754 LQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 813
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 814 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQLLKSTTN 868
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDA 952
++ S++L + + LE++ EL E+++ +V+P+ET L Q E +
Sbjct: 869 ELKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIKDAKEQVSPLETTLEKFQQEKEE 928
Query: 953 L--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQR 1010
L KK K+ ++ K+ D ++++ + +I NY + G +E +K +
Sbjct: 929 LINKKNTSNKIAQD--KLNDIKEKVKNIHGYVKDIENYIEDG--------KEDYKKQKET 978
Query: 1011 K-EDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+ +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 979 ELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1038
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + + K +H+L K + +++ R +RE
Sbjct: 1039 KQHLKEMGQMQVLQMKNEHQKLEENI--ENIKRNHSLALGRQKGYEEEIIHFKRELREPQ 1096
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1097 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRNTYR 1156
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+ A LIIRL
Sbjct: 1157 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKA-ASLIIRLA 1215
Query: 1211 I---------------------------------------SDQKNFQLIVITHDEEFIEN 1231
+ S Q+NFQL+VITHDE+F+E
Sbjct: 1216 LAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVEL 1275
Query: 1232 LTAIDRAYVVRIVR 1245
L + YV + R
Sbjct: 1276 LGRSE--YVEKFYR 1287
>gi|348518948|ref|XP_003446993.1| PREDICTED: DNA repair protein RAD50-like [Oreochromis niloticus]
Length = 1312
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 355/1362 (26%), Positives = 668/1362 (49%), Gaps = 182/1362 (13%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D++ I+G+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K++ + E P G
Sbjct: 1 MSKIDKMSILGVRSFGIEDKDKQVISFFTPLTVLVGPNGAGKTTIIECLKYSTSGELPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDP+ + + A ++L + N + V + RS
Sbjct: 61 ---------------------SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K + + I+R + G + +L E EM + +GVSK +LN+VIFC
Sbjct: 100 MSCTQKAKSYTFKSLEQVITR--WKDGEKVSLSSKCGELDREMISSLGVSKPVLNHVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FD IF ATKY KALE+++ +LR + +I Q L Y
Sbjct: 158 HQEESNWPLSEGKALKDKFDSIFAATKYIKALETMR----QLRLKQSQIVKECQVELRYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K Q I ++ S + + IE ++P+ +L+ + K + + + +
Sbjct: 214 KQNKEKAQQIRETVDTKEAQLMASKDSVQQIENQIEPLENRLMDIDLKLGKVMKLDNEIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQS--------------KLNLFKINLDEKC 340
+ + ++E ELE +++Q+F G ELQ +L + L+
Sbjct: 274 ALDSRKKQMEEDNKELEETMEQVFQGSDEELQEIYQNHQRTVREKERRLTECQKELERAG 333
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
E + R+K++ + E+ G+L+ + + H + T++ +L+ L
Sbjct: 334 RECQRLNRIKAELLVEQ--------------GRLQLEADRHTQNIRNRDTQVRSLSTYLE 379
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVEL 460
++ + +T + E + +++ + + + E KQ I+ + +K L
Sbjct: 380 MEGYDRPPFTALQLESFHRHVTQRLEQEKGTLSQVMVNLQEKEQQKQQSIDEMRDKKTGL 439
Query: 461 ESKIKSFKQQIEGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
E ++ K+ ++G K ++L +V ++ + S + LQ L+ +L +V E+ ++ + +
Sbjct: 440 ERTVE-LKRDMQGKKQQELRSVRAELQRLEGSSTRLQELENELAKVERELQSAIQNSNVE 498
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKER 579
QLK E+ R++ EL+ + +D E+ L + ++ LK K K + +K R
Sbjct: 499 QLKAEVSELQREKAELDRKQRKLDQEMETLNTHMTSRTQMDMLKKDKGEKEEQVRKIKSR 558
Query: 580 HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
H L P K L+ + S + +IN + + K L + E N S+ S L
Sbjct: 559 HSEDLVPLLGQFPN---KRVLEDWIYSKSKEINSTRNRLAKLNKDLASSEQNKSHISAEL 615
Query: 640 RDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-E 698
R +++ L ++ V GS+ + +L ++ +L++ ++ +M+ ++ +I +L E
Sbjct: 616 RKKEQQLTSDEEKFFNVCGSQDLDQDLSKLQEDLEKMSKQRAMLAGATAVYTQFISQLTE 675
Query: 699 ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV 758
+ EP CP+C R F S+ + ++N +++K++ +P++ N + + + +++ + LKPV
Sbjct: 676 DREPCCPVCQRTFPSESDLQEVINDMQSKLRLVPDKLKNTEQDLKRKERKKDEMMALKPV 735
Query: 759 YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLL 818
++I++LQ+ ++P L+++L + + KG++++ +T L T ++E+TA + D++LL
Sbjct: 736 RQSIVQLQEKELPELKNRLQTVNREIERLKGDVEEQETLLATLMSEEETAKACLPDISLL 795
Query: 819 DQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLN 878
D+ +L ++R++ + +K+ G+ T QV +++E +++L+T SK+E + +
Sbjct: 796 DRYQMDLKEVERKIAQHAAKLQGVDLTRT-TQQVSQEKQETQHKLDTTSSKMELKRKLIQ 854
Query: 879 SHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAP 938
E++Q+L+ N+ +++L + + LE++ E + TE++ L R +
Sbjct: 855 DQQEQIQTLRSAVNETRAEKLQLSSDMQKQQQLEEQCAE-------FTTEIQSLTRDIRE 907
Query: 939 IETQLNLAQSELDALKK------EHKKKLNEEGA-KIQDYTKQLEEVKRIKLEILNYTKR 991
+ QL+ + L+ L++ E K++ EEG KI ++L+ + ++ +I Y
Sbjct: 908 AKEQLSPLSAALEKLQQEKQELLERKRQKQEEGQEKISSIKERLKAITTLERDITKYVDE 967
Query: 992 G--------------TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSL 1037
G T TQL + +K+N + I I Q I Q +
Sbjct: 968 GKDEYKEQKESELHETNTQLHEAEKHKEKIN--------------KEIGNIRQDIDTQKV 1013
Query: 1038 EEIDLKNNLTL----------LEKKEA---------VAKLNEELKLSEIMISDLTK---- 1074
+E L++NLTL + K+EA V +L +E + +E + DL +
Sbjct: 1014 QERWLQDNLTLRKRVEELKEVVGKREALMKDMGNMQVMQLRQERREAERKLEDLKRNRSI 1073
Query: 1075 ---YHHTLENCVIKYHSQ-KMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVI 1130
E+ ++ Y + + ++ Y ++ ++ +E++I DL Y+ L+ ++
Sbjct: 1074 ALGRQKGFEDEILHYRKELREDQYDKADERYRNKMITMRTTELVIKDLDLYYKALDQTIM 1133
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE---KRRTYNYRVVQKKNGI 1187
K+HS KM IN++IR+ W Y+G DI+Y+ I +DV S +RR YNYRVV K
Sbjct: 1134 KFHSMKMDEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVRRRVYNYRVVMVKGDT 1193
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISD---------------------------------- 1213
DMR RCSAGQ+VLA LIIRL +++
Sbjct: 1194 ALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEII 1253
Query: 1214 -----QKNFQLIVITHDEEFIENL---TAIDRAYVVRIVRDH 1247
Q+NFQL++ITHDE+F+E L + I+ Y +R +D
Sbjct: 1254 KSRSRQRNFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQ 1295
>gi|195027447|ref|XP_001986594.1| GH20438 [Drosophila grimshawi]
gi|193902594|gb|EDW01461.1| GH20438 [Drosophila grimshawi]
Length = 1307
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 375/1377 (27%), Positives = 673/1377 (48%), Gaps = 136/1377 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I G+R+F A+ + + F P+TLI+G+NGCGKTTIIECIK+ALT++ P G
Sbjct: 1 MSTIEKLSIQGVRSFGANAEDMQSITFSSPITLILGQNGCGKTTIIECIKYALTSQCPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ SGK FV HDP+I +K E VK+ + + + RS
Sbjct: 61 SDSGKRFV--------------------HDPKIFRKSECLGQVKILMRNRLDARLSICRS 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ LS +N K D ++ + Q+++ ++ + + + +GVS+AI+NNV+FC
Sbjct: 101 MKLSVRNNKTTFNKVDCAVN--FLGSDSQESMSFRRENTDSAVADFMGVSQAIINNVLFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R ++++ +++ + K
Sbjct: 159 HQEDSSWPLDEPKKLKEKFDAIFGITEYNKALDRIIALRKSAQEKLKVMESDMRVYEYIK 218
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
KE D K + +K + E + +KPI+ +L ++ RN+ +YQ +K
Sbjct: 219 KEMDEKTLGLQKAQRKLEDIKMECDKCDADVKPIDGRLEEI----RNIEFDIGKYQAQKV 274
Query: 299 ERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDE---KCSELENQ-ERLK 350
E D ++C E L +IK F+G AEL+ ++ F + E + +++E Q ERLK
Sbjct: 275 EMDTKHKNCVEQIEKLSGNIKSHFTGSIAELEVEIRSFNQRMSEMKFQTTDVEEQLERLK 334
Query: 351 S-------QYIQEEKQSHTHINEAQMKLGKLERDEETHK-KLNDTLKTKLNNLADTLCLD 402
+ + +++EK+ AQ K R+E+ +K +L D+L+ L +C+
Sbjct: 335 TSNTDQQNKLVKQEKERCV----AQQKY----RNEQNYKLQLTDSLQVLCVQL--EICVR 384
Query: 403 TTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNEN-----TKQAEINALIVEK 457
A P++ L+ ID L K E T EN ++QA+I+ L +
Sbjct: 385 ANAVD--NPQQLSSLL----DEIDLMLIS-KQREITKQSEENDQADQSRQAKIDDLRTDI 437
Query: 458 VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
+ E + S ++Q + ++ + ++ +INE+ +S L+VL+ K+ + E ++ ++ +
Sbjct: 438 TKSEQSVSSQQKQKKASEVESQSLELKINEIEKSLEQLKVLEKKIADTDDEYERTTRIFN 497
Query: 518 PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLK 577
++ + I E +D +++ L + +AEI + E K +I+ +
Sbjct: 498 QEECRQLIANKKVSIAEKRARFNKLDEQLTFLSSIAKLMAEIGLKEKELEKKKQEIHRGR 557
Query: 578 ERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
+H F F N+++S+ + DI + ++ N ++ + E N N
Sbjct: 558 SKHSDNFVKFFKEPITSNYRHSMKTEYDKLRRDIQDLNDNANRQKIEEQSHEINRKNLIG 617
Query: 638 TLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL 697
+ ++ L EL +R+ + +++ L R + R Q E + S + ++ YI K+
Sbjct: 618 DIARMEKELHELEERIYEKCHAARYDELLLRSKEAISRFQLEHGALKSAENMYKKYIQKI 677
Query: 698 EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKP 757
E EP CPLC D ++ L L +I+++P+ + + + L ++KP
Sbjct: 678 NE-EPSCPLCHHNMSGDEAL-DLTTDLTDEIQKLPDNIAKTEKALKAEQSKYEELLQIKP 735
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTL 817
+ + +L++ +P + +L + + + E + + LK L P + A S+ D+TL
Sbjct: 736 AIDKVQELKEL-LPKKKEELRMIGQRLSEIVAKYETLKEQLGEPTVNMELANSMLPDMTL 794
Query: 818 LDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRL 877
LD++++E ++++L++ + K+ V+ + + A++ E E+ +E+ Q
Sbjct: 795 LDESLKESARVKKDLDQLKLKLPASYDASVNTEALQAEKTEVSKEIVADAKALETEQQNF 854
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVA 937
E L L+++KN + K + ++ G L ++R+ EL + E+ EL K+
Sbjct: 855 EQKMEALHQLREKKNGLKDKMIKLKEGEQSLPQFKERQDELSNLLIALTAEISELESKIR 914
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
P++ +L+ A SE LK+ + KL+E K Q+Y ++++R+K E+ + K +
Sbjct: 915 PLKQRLSSALSEKARLKESERVKLSEMQKKYQEYKSTDQDIQRLKKEMQEFAKLDLANAI 974
Query: 998 ----AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
AA+ + ++LN+ K II + + NQ E DLK+N L + ++
Sbjct: 975 KKLDAAINGTNEELNKLKGKIIE----TSEKLESVKTECLNQETLERDLKDNRELKQLQQ 1030
Query: 1054 AVAKLNE-----ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL----------- 1097
+KL+E +L + ++TK L + + ++ + +L
Sbjct: 1031 KQSKLSEICQTLSEQLGNLDFRNVTKEKQELSKKQKEAYVRRAQLFGQLGEIQIQVENLQ 1090
Query: 1098 -----------IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1146
+ Y +++ + I DL ++ LE +I++H++KM +IN LIRE
Sbjct: 1091 RDIDQPKYKQSMNNYRRAQFEVAVKRRGIDDLGQHRVALEWALIQFHAEKMSNINSLIRE 1150
Query: 1147 YWTRIYQGNDIDYISIAA-----DVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
YW IY+GNDIDYI I D +++R++YNYRVVQ KN E +MR RCSAGQRV
Sbjct: 1151 YWRMIYKGNDIDYIQIKTNDEDDDKKASADRRKSYNYRVVQSKNNSEIEMRGRCSAGQRV 1210
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
L LIIR+ +++ + V+ DE T +DR ++ + C
Sbjct: 1211 LGSLIIRMALAETFSSNCGVLALDEP----TTNLDRDNIISL--------------CDAL 1252
Query: 1262 ALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIH 1318
N ++N Q NF LI+ITHDE FI +L I+ + R+ R+ +G S I
Sbjct: 1253 -------NSIVENRQFQSNFMLIIITHDENFISSLGRINSYH--RVYRNPEGKSVIQ 1300
>gi|322778931|gb|EFZ09347.1| hypothetical protein SINV_80256 [Solenopsis invicta]
Length = 1374
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 371/1378 (26%), Positives = 683/1378 (49%), Gaps = 156/1378 (11%)
Query: 1 MALLDQLHIMGIRNFPAD-KNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L + GIRNF D ++ ++RF PLTLI+G NG GKTTIIE +KFA T +P
Sbjct: 1 MSKVRRLSLRGIRNFGDDSEDALIRFSCPLTLILGANGTGKTTIIEALKFATTGSFPPTG 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
+ ++G+NFV+DP + +VK + ++ V R +
Sbjct: 61 ----------------DRPGTAGRNFVYDPILATTSTVRGVVKAEIIDSKGESYQVSRII 104
Query: 120 LLS-NKNGKDNCATRDTTISR-------KIFATGVQKNLGCLQQESVLEMCNLIGVSKAI 171
LS +NGK T D+TI+R K TG N+ E+ +GVSK+I
Sbjct: 105 ELSKGENGK--FKTLDSTITRYSRDKQQKTSITGRCANIDT-------EINIALGVSKSI 155
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAH 230
LN VIFCHQ+ +WP D GK +KE FDEIFD+ ++NKALE+I K+Q++ L+ +I + A
Sbjct: 156 LNYVIFCHQDELNWPFDSGKVLKERFDEIFDSARFNKALEAILKLQKE-LQGDIKTLNAE 214
Query: 231 YQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMS 290
Q E + K+ + + ++ D + E++ I + ++P+ +K+ ++ + + +
Sbjct: 215 KQTYKVLVSEVEGKENKLKEHKKRLDATKEKVSEINKQLEPVKQKIEEVQQSHTEYNNVQ 274
Query: 291 TQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQERL 349
+ + KK E M ++ +L+ +IK +F EL +++ ++ L +K +E+ EN+ +
Sbjct: 275 IEEEKKKMEYSMHRDRYTKLKENIKNIFEETTEELNTRIESYETVLKDKNNEIAENEAEV 334
Query: 350 KSQYIQEEKQSHTHINEAQMK-LGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQ 408
K I E+ ++I + + +G L++ + H++ LNN DT
Sbjct: 335 KG--ISEKGNRISNILATRRETVGTLKQQVKDHERRLVRRNQLLNNALQAWDFDTVE--- 389
Query: 409 YTPEEGEGLIKMSQTTIDKYLSD-IKILERTFSDN-------ENTKQAEINALIVEKVEL 460
P+ E +K + K L + +++LE+ N E Q E++ L ++
Sbjct: 390 --PDVSEIEVK----ALTKRLEEKMRMLEKEVEKNRLAMQSKEKELQKEVDTLRSNYSKI 443
Query: 461 ESKIKSFKQQIEGNKKDLTNVI-TQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
ES+ K K+Q +D N I QI ++ + + L+ ++ KL ID+LS +L+ D
Sbjct: 444 ESE-KILKEQDITEIRDEINAIRNQITQIGAAGNKLKSIEQKLQTAKQRIDELSGALNVD 502
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKER 579
+K +I I+ R+++E L ID EIS L + AE + K+ ++K ++ LK +
Sbjct: 503 SVKADIAEKIKSRDKIETSLNAIDDEISSLHKLSSLTAEFELKKSALQAKEEELENLKRK 562
Query: 580 HDRAFHLLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
H + +L ++ + + K++L++ + + N + +I +E+ E +
Sbjct: 563 HGDSIKVLLNIQELEQIKLKDTLERIHQKLEKETNALTREIQTQERKTTAFETTARHIET 622
Query: 638 TLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL 697
++ + L ++ V K F++ L + +K Q + + + Y+ KL
Sbjct: 623 EIKKKTLELHNDKQKVSTVCDYKDFDETLLFQSTIIKDLQNKRGIYAHQALAYKEYVAKL 682
Query: 698 EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR---SLQE 754
P CPLC R FE + +V L+ +++ I I Q + K+ +L K+Q ++ +
Sbjct: 683 SLKNPCCPLCHRNFEKEDTVANLIEEIENDI--IRSQPDRLKSCERELGKEQEKYDNMLQ 740
Query: 755 LKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGD 814
LKP+ ENI++ ++ D+ L KL + + +V E+K +K L+T+ P+ K S+ GD
Sbjct: 741 LKPIVENIIRCEENDLKRLEEKLKKTQNSVAESKITVKDLETSKAEPEKKLLLYKSIIGD 800
Query: 815 LTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNT----FRSKI 870
+ D+ I E+ L+R + E+K M + G+ ++ + + + ++ L T R+ I
Sbjct: 801 IKFWDRCIDEIQQLKRGVNNLEAK---MANAGIKTERTIEEAQTQRESLRTSLRETRNLI 857
Query: 871 ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELE 930
++ Q +LN HNE+LQ + N++H +QL + LK L+D++ +L + +E
Sbjct: 858 DALQLKLNKHNERLQDARAMYNELHEEQLKIHSDMQKLKHLKDKQEDLYARELTIGETME 917
Query: 931 ELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTK 990
+L + +A ETQL +L+ K E+ +K + I + ++L ++ I I ++
Sbjct: 918 KLRKDLALAETQLESRNRQLEKTKTENWQKQEADRKSISESARRLSDLHEILDYINSFIN 977
Query: 991 RGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLE 1050
L +LA ++ +++ K+ E+ I+++ + IA+Q + + +L +N+ L +
Sbjct: 978 SNVLEKLANYEREIETYKNSLTELMNKKNDIEQAISKLKEDIASQEIGKRELLDNINLRK 1037
Query: 1051 KKEAVAKLNEEL-----KLSEIMISDLTKYHHTLEN--------------------CVIK 1085
KE + L E+ KL + ++ K LEN VIK
Sbjct: 1038 IKETLETLKEQYRKLNEKLKNMDYKEIMKKWDQLENEKQALLRQKNVALGNQEELERVIK 1097
Query: 1086 YHSQKM-RSINRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1143
++ ++ + RL R Y + +L + E I++L Y+ L+ +I+YH ++M ++N++
Sbjct: 1098 QYTHELQKEEYRLARRNYNNKCIELTVQEDTIANLKAYNKILDVAMIEYHEERMSTVNKI 1157
Query: 1144 IREYWTRIYQGNDIDYISIAAD-VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVL 1202
+R+ W +Y+G D I I + + RR+Y Y+++Q K+G + DMR RCSAGQ+VL
Sbjct: 1158 MRKLWKHVYKGTDTSSIEICTEPTKETANNRRSYCYKLMQTKHGCKMDMRGRCSAGQKVL 1217
Query: 1203 ACLIIRLFISD----------------------------------------QKNFQLIVI 1222
A +IIRL +++ QKNFQLI+I
Sbjct: 1218 ASIIIRLALAETFCKNCGILALDEPTTNLDEENAKSLADMLTKVVELRSKHQKNFQLIII 1277
Query: 1223 THDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL-----DEPTTN-LDIKN 1274
+HDE+F++ L ++ ++K E + ++ G+ A+ +EPT++ L IKN
Sbjct: 1278 SHDEKFLQKLADLN---------NNKQFHELYRKHNGMTAVRICDFNEPTSSLLHIKN 1326
>gi|348557552|ref|XP_003464583.1| PREDICTED: DNA repair protein RAD50-like [Cavia porcellus]
Length = 1315
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 368/1357 (27%), Positives = 685/1357 (50%), Gaps = 138/1357 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGK---TTIIECIKFALTNEY 55
M+ ++++ I G+R+F DK++ ++ F PLT++VG NG GK TIIEC+K+ T ++
Sbjct: 1 MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTVLVGPNGAGKDGIVTIIECLKYICTGDF 60
Query: 56 PQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCV 115
P G + G FVHDP++ ++ + A ++LQ N + + V
Sbjct: 61 PPG---------------------TKGNTFVHDPKVAQETDVRAQIRLQFCDVNGERIAV 99
Query: 116 VRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
RS+L S K+ K T + I+R V + C + + EM + +GVSK++LNNV
Sbjct: 100 QRSMLCSQKSKKTEFKTLEGVITRTKHGEKVSISSKCTEIDR--EMISALGVSKSVLNNV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + +
Sbjct: 158 IFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLK 217
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQ 294
K++A + I + + S E + + E ++P+ +L ++ E N+S +M +
Sbjct: 218 QNKEKACEIRDQITSKEAQLISSKEIIQSYENELEPLENRLKEI---EHNLSKIMRLDNE 274
Query: 295 TKKTE---RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
K E + M +++C ELE ++++F G +L + + + EK L + +R
Sbjct: 275 IKALESRKKQMEKDNC-ELEQKMEKVFQGTDEQLNDLYHNHQRIVREKERRLVDCQRELD 333
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+ +E + + +E ++ G+L+ + H++ + + +LA L LD + ++
Sbjct: 334 KLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSD 393
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIK 465
+ + K+ + ++ L F + E KQ +I+ + +K +EL+S+I
Sbjct: 394 RQIKNFHKLVKERQEQEAETANQLMNDFVEKETLKQKQIDEIRDKKTGLGRIIELKSEIL 453
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
S KQ +L +V ++ ++ S + L +L + E+ + K+ + + LK E+
Sbjct: 454 SKKQ------NELKHVKCELQQLEGSSDRILELDQELTKAERELSKAEKNSNIEILKAEV 507
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
+ ++ +L+ L +D E+ L T +++ L K K I +K RH+
Sbjct: 508 ISLQNEKVDLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHNDELT 567
Query: 586 LLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRT 645
LL P K L+ L S + +IN+ ++ + K L + E + ++ S L+ ++
Sbjct: 568 LLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQHKNHISNELKRKEEQ 624
Query: 646 LAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRC 704
L+ D++ V GS+ FE +LDR+ ++++ ++ +M+ +++ +I +L E + C
Sbjct: 625 LSSYEDKLFDVCGSQDFEMDLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTHEKQSCC 684
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
P+C R F+++ + +++ L++K++ P++ + + + + K++ + L P+ +NI+
Sbjct: 685 PVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTELELKKKEKRRDEMLGLVPMRKNIID 744
Query: 765 LQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
L++ +IP LR+KL + ++ K ++++ +T L T +E++A D+T++++ E
Sbjct: 745 LKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQME 804
Query: 825 LNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSH 880
L ++R++ +Q +K+ GVDL+ QV +++EK+++L+T SKIE + +
Sbjct: 805 LKDVERKIAQQAAKLQ-----GVDLNRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQ 859
Query: 881 NEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIE 940
E++Q L+ N++ S++L + + LE++ EL E+ + ++ P+E
Sbjct: 860 QEQIQHLKSTTNELKSEKLQIATNLQRRQQLEEQTVELSTEVQSLHREINDAKEQIKPLE 919
Query: 941 TQLNLAQSELDALKKEHKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG------ 992
T L + E + L +KK N + A K+ D ++++ + +I NY + G
Sbjct: 920 TTLERLKQEKEELT--NKKHTNNKIAQDKLNDLKEKVKNIHGYMKDIENYIQDGKDEYKK 977
Query: 993 -TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL--- 1048
T+L + + + +++KE I + GV + Q I Q ++E L++ LTL
Sbjct: 978 QKETELNTVTAQLSECDKQKEKISKEMGV-------MRQDIDTQKIQERWLQDTLTLRKR 1030
Query: 1049 -----------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKM 1091
+ + + + NE KL M D K + L K + +++
Sbjct: 1031 NEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLK--MNIDDIKRNRDLALGRQKGYEEEI 1088
Query: 1092 RSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINR 1142
+ +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN+
Sbjct: 1089 IRFKKELREPQFRDAEEKHREMMIVMRTTELANKDLDLYYKTLDQAIMKFHSMKMEEINK 1148
Query: 1143 LIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQ 1199
+IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ
Sbjct: 1149 IIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQ 1208
Query: 1200 RVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCG 1259
+VLA LIIRL +++ ++ DE T +DR + + AL E
Sbjct: 1209 KVLASLIIRLALAETFCLNCGILALDEP----TTNLDRENIESLAH---ALVEI------ 1255
Query: 1260 IFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENL 1296
IK+ S Q+NFQL++ITHDE+F+E L
Sbjct: 1256 ------------IKSRSQQRNFQLLIITHDEDFVELL 1280
>gi|11560048|ref|NP_071582.1| DNA repair protein RAD50 [Rattus norvegicus]
gi|60392975|sp|Q9JIL8.1|RAD50_RAT RecName: Full=DNA repair protein RAD50
gi|9651650|gb|AAF91229.1|AF218576_1 Rad50 [Rattus norvegicus]
Length = 1312
Score = 409 bits (1050), Expect = e-110, Method: Compositional matrix adjust.
Identities = 351/1330 (26%), Positives = 668/1330 (50%), Gaps = 151/1330 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ +G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSTLGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVLVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKSKKTEFKTLEGVITRIKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLRQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + E ++P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLASSREIVKAYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLSKEAR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQERAELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
++ + ++ L +D E KQ +++ + +K +EL+++I + KQ
Sbjct: 398 ELVRERQEREAKTASQLLSDLTDKEALKQRQMDEMRDKKSGLGRMIELKTEILTKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + LK EI ++
Sbjct: 455 ---TELRNVRNELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEILNLQSEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRNLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ ++++ ++ +M+ +++ +I +L +EN+ CP C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPGCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + +++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR++L + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ GVDLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ + N++ S++L + + +E++ EL TE++ L R++ + Q+N +
Sbjct: 864 KSKTNELKSEKLQIATNLQRRQQMEEQTVEL-------STEVQSLNREIKDAKEQINPLE 916
Query: 948 SELDALKKE-----HKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG----TLTQ 996
L+ L++E H+K + + A KI D ++++ + +I NY + G +
Sbjct: 917 IALEKLQQEKEELIHRKNTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQK 976
Query: 997 LAALRESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL----- 1048
L E V +LN+ KE I + G + Q I + ++E L++NLTL
Sbjct: 977 ETELNEVVIQLNECDKHKEKINKEMGT-------MRQDIDTKKIQERWLQDNLTLRKRRE 1029
Query: 1049 ---------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1093
+ + + + NE KL E + D K +H+L K + +++
Sbjct: 1030 ELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DTIKRNHSLALGRQKGYEEEILH 1087
Query: 1094 INRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLI 1144
+ +RE R + K E+MI DL Y+ TL++ ++K+HS KM IN++I
Sbjct: 1088 FKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKMEEINKII 1147
Query: 1145 REYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
R+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+V
Sbjct: 1148 RDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKV 1207
Query: 1202 LACLIIRLFI---------------------------------------SDQKNFQLIVI 1222
LA LIIRL + S Q+NFQL+VI
Sbjct: 1208 LASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVI 1267
Query: 1223 THDEEFIENL 1232
THDE+F+E L
Sbjct: 1268 THDEDFVELL 1277
>gi|449269182|gb|EMC79984.1| DNA repair protein RAD50 [Columba livia]
Length = 1314
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 346/1326 (26%), Positives = 662/1326 (49%), Gaps = 141/1326 (10%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSILGVRSFGVEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G +FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGSSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K K T + I+R G + +L E EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKGKKTEFKTLEGVITRT--KHGEKASLSSKCAEIDREMISALGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KAL++++ R + ++ E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRLKQSLKVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K Q I N+ R+ S + + +IE ++P+ L + + + +
Sbjct: 214 KQNKEKAQEIQNHLSNREAQLAASKDNVKSIESQLEPLKSSLAAVEQNLVKAMRLDNDVK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ R +++ +L+ +K++F G +L+ + + ++EK L + +R +
Sbjct: 274 ALESRRRQMEKDNEDLQQKMKKVFQGTDEQLRDRYQNHQRTVNEKEKRLSDCKRELDRAT 333
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+E ++ ++ +E ++ G+L+ + H++ T + + +LA L LD ++
Sbjct: 334 KECQRFNSEKSELLIERGRLQLQADRHQEHITTRDSLIQSLAAQLELDGFERAPLNERHV 393
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
+ + ++ L R F+ E KQ +I+ + +K LE I K I+
Sbjct: 394 ASFHVLLKERQERDAEAANHLMREFARKEAMKQKQIDEIRDKKTGLERTI-DLKSDIQNK 452
Query: 475 KK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ +L NV ++ ++ + L ++ + E+++ ++ + ++L+ E+ ++
Sbjct: 453 KQVELKNVKYELQQLEGFSDRILELDQEIVKTEHELEKAERNSNVEKLELEVRTLQNEKI 512
Query: 534 ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE 593
L+ L +D E+ L T+ +++ LK K K I +K RH L P
Sbjct: 513 NLDKTLRKLDQEMEQLNLHTATITQMEILKKDKADKEEQIRKIKSRHSDELTSLLGYFPN 572
Query: 594 ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTL----AEL 649
KN L+ L S IN+ ++++ K L ++E + S++S LR ++ L A++
Sbjct: 573 ---KNQLEDWLHSKNKKINQTRDNLGKLNKRLASVEYDKSHASSELRRKEEQLSLHEAQI 629
Query: 650 MDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCT 708
D V GS+ F+ +L+++ E+++ ++ +++ +++ +I +L EEN+ CP+C
Sbjct: 630 FD----VCGSQDFDSDLNKLQDEIEKSSKQRAVLAGATAVYSQFITQLTEENQSCCPVCQ 685
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT 768
R F+++ + +++ L++K++ P++ + ++ + + ++ + LKP+ + +++LQ+T
Sbjct: 686 RVFQTEAELQDVISDLQSKLRLAPDKLKSTESELKRKELKRDEMMSLKPLRQTVVELQNT 745
Query: 769 DIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTL 828
DIP LR+K+ +++ KGE+++ ++ L+ ++E+ A + D+TL+++ ++
Sbjct: 746 DIPGLRNKIQNANRDLVSLKGEIEEQESQLQAALSEEEGAKACLQDITLMERYQADIRDC 805
Query: 829 QRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
+R++ +QE+K+ GVDL QV +++EKK+ +T KIE Q ++
Sbjct: 806 ERKIAQQEAKL-----LGVDLSRSVLQVSQEKQEKKHLWDTVTGKIELNQKLKQDQQTQI 860
Query: 885 QSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLN 944
Q L+ N++ +++L + + LE++ EL E++E + P++ L
Sbjct: 861 QQLKSAVNELKAERLQISSSMQRRRQLEEQTVELTTEVQSLCREIKEAQEQAFPLDATLE 920
Query: 945 LAQSELDAL-------KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
Q E + L KE ++K++ K++D K ++E++ + + K+ +L
Sbjct: 921 KLQQEKEDLMNKRTTSNKEAQEKISVIKEKVKDINKYVKEIENYIQQRKDDYKKQKEAEL 980
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQ--SLEEIDLKNNLTLLEKKEAV 1055
++ + ++KE I + + I Q I Q ++E L++NLTL ++ E +
Sbjct: 981 EEVKSQLAACEKQKEKI-------SKEMETIRQDIDTQKVDIQERWLEDNLTLRKRNEDL 1033
Query: 1056 AKLNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRL 1097
++ + +K + E+ + + LE + + +++ +
Sbjct: 1034 KEVEDNIKQLVKEMGEMKVPQMKNEQKRLEEKIESLKRNHDVALGRQRGFEEEIVRFKKE 1093
Query: 1098 IREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+RE R K E+MI DL Y+ L+ ++ +HS KM IN++IR+ W
Sbjct: 1094 LRESQFRDADEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKMEEINKIIRDLW 1153
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D + S+KRR+YNYRVV K DMR RCSAGQ+VLA L
Sbjct: 1154 RSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSAGQKVLASL 1213
Query: 1206 IIRLFI---------------------------------------SDQKNFQLIVITHDE 1226
IIRL + S Q+NFQL+VITHDE
Sbjct: 1214 IIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDE 1273
Query: 1227 EFIENL 1232
+F+E L
Sbjct: 1274 DFVELL 1279
>gi|432109532|gb|ELK33706.1| DNA repair protein RAD50 [Myotis davidii]
Length = 1331
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 361/1354 (26%), Positives = 682/1354 (50%), Gaps = 156/1354 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ IMG+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSIMGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP+I ++ + A ++LQ N D V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKIAQETDVRAQIRLQFRDVNGDFVAVHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKGKKTEFKTLEGVITRIKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A ++ I + + S E + + E + P+ +L ++ E N+S +M + K
Sbjct: 218 EKACEIREQITSKEAQLTSSKEIVKSYENELDPLKNRLKEI---EHNLSKIMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E + +++ +ELE ++++F G +L + + EK +L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYLNHQRTIREKERKLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + +E ++ G+L++ + H++ + + +LA L LD ++ + +
Sbjct: 335 ESRLLNQEKSELLVEQGRLQQQADRHQENIRARDSLIQSLASQLELDGFEHGPFSERQIK 394
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
K+ + +K L F++ E KQ +I+ + +K+ L +I K +I K
Sbjct: 395 NFHKLVRERQEKEEETASQLMNDFAEKETLKQKQIDEIRDKKIGL-GRIIELKSEILSKK 453
Query: 476 K-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+ +L NV +++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +
Sbjct: 454 QNELKNVKSELQQLEGSSDRIHELDQELTKAEHELSKAEKNSNVETLKTEVISLQNEKAD 513
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ L +D E+ L T +++ L K K I +K RH + L P
Sbjct: 514 LDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEQIRKIKSRHSDELNSLLGYFPN- 572
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
KN L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++
Sbjct: 573 --KNQLEDWLHSKSREINQTRDRLAKLNKELASAEQNKNHINIELKRKEEQLSSYEDKLF 630
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFES 713
V GS+ FE +L R+ E+++ ++ +M+ +++ +I +L +E++ CP+C R F++
Sbjct: 631 DVCGSQDFESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDESQSCCPVCQRVFQT 690
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP L
Sbjct: 691 EAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPEL 750
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
R+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R++
Sbjct: 751 RNKLQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERKIA 810
Query: 834 RQESKISGMRSTGVDLDQVLAQ----QKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK 889
+Q +K+ G+ DLD+ L Q ++EK+++L+T SKIE + + E++Q L+
Sbjct: 811 QQAAKLQGL-----DLDRTLQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLRG 865
Query: 890 QKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQS 948
N++ S++L + + LE++ EL + S+Y+ E+++ +++P+E L Q
Sbjct: 866 VTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQISPLEITLEKFQQ 924
Query: 949 ELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG-------TLTQLAA 999
E + L KK ++ ++ K+ D ++++ + I NY + G T+L
Sbjct: 925 EKEELIFKKNTSHRITQD--KMNDIKEKVKNIHGYVKNIENYIQDGKDDYKKQKETELNK 982
Query: 1000 LRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN 1059
+ + + + KE I G+ + Q I Q ++E L++NLTL ++ E + ++
Sbjct: 983 VIAQLSESEKHKEKINTDMGI-------MRQDIDTQKIQERWLQDNLTLRKRNEELKEVE 1035
Query: 1060 EELK-----LSEIMISDLTKYH-------------HTLENCVIKYHSQKMRSINRLIREY 1101
EE K + ++ + L H H+L K + +++ + +R
Sbjct: 1036 EERKQHLKEMGQMQVLQLKNEHQNLGEKIENIKRSHSLAIGRQKGYEEEIIHFKKELRSP 1095
Query: 1102 WTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIY 1152
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y
Sbjct: 1096 QFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTY 1155
Query: 1153 QGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQR--------- 1200
+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+
Sbjct: 1156 RGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKAGTQNLGAT 1215
Query: 1201 ----------VLACLIIRLFI--------------------------------------- 1211
VLA LIIRL +
Sbjct: 1216 FTQRIDRETNVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHSLVEIIKSR 1275
Query: 1212 SDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVR 1245
S Q+NFQL+VITHDE+F+E L + YV + R
Sbjct: 1276 SQQRNFQLLVITHDEDFVELLGRSE--YVEKFYR 1307
>gi|194882203|ref|XP_001975202.1| GG22190 [Drosophila erecta]
gi|190658389|gb|EDV55602.1| GG22190 [Drosophila erecta]
Length = 1303
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 391/1405 (27%), Positives = 660/1405 (46%), Gaps = 239/1405 (17%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F A+ + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYAEDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALES-IKIQRDRLRK-EIPEIKA 229
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ IK+++D + + ++ E K
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKDAMEELKLKESKM 217
Query: 230 HYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVM 289
+ A L K+E + K + +K D + EE MKPI +L+++ RN+
Sbjct: 218 KHVAYL--KQEMEVKTLNLQMAQRKCDAIKLQCSECEEEMKPIEARLMEI----RNVEFE 271
Query: 290 STQYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDE---KCSE 342
+YQ +K E D ++C + L S IK F G AEL ++N F + E K +E
Sbjct: 272 IGKYQAQKVEMDTKHKNCKDQISTLTSKIKTPFRGTLAELDQEINNFDQRMQEMHQKRTE 331
Query: 343 LEN------------QERLKSQYIQE--EKQSHTHINEAQMKLGKLERD--EETHKKLND 386
+E QE+L +Q + KQ H Q +L K +D E H +N
Sbjct: 332 VEGDLSQIRKSRVSEQEKLGTQDRKHCLAKQRHQSELACQAQLLKRVKDFCREVHITINS 391
Query: 387 TLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTK 446
L ++ + GE L + I K+ +I+E+ + ++
Sbjct: 392 DL------------------VEHPEKMGEVLQDIEAMLITKHCEITEIVEQN-EKADRSR 432
Query: 447 QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN 506
Q +I+ L +E + E + + ++Q E +K++ + I ++ S L+ L+ ++ VN
Sbjct: 433 QVKIDELRIELTKSEQSVTAQEKQRESSKRESETLGKDIKKIETSMQDLKKLEKEITEVN 492
Query: 507 SEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK 566
+ +K +D +K+ I E + + +D +++ L + +AE SLK ++
Sbjct: 493 ELYETATKDIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKE 551
Query: 567 -ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
+ K +++ ++ RH F F N++ S+ + +I + E N+++
Sbjct: 552 LDKKNQEVHRVRSRHSDHFGKFFKEPITCNYRRSMQGVYDKLRREIQDLNEKANSQKLKE 611
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSM 682
+ E N + D RT EL + EL+ S P++D L+R + + Q +
Sbjct: 612 QSYEIKRKN---LIGDISRTEKELKESEELIFQKCRSTPYDDLLERSKTAISKLQFDHGA 668
Query: 683 MTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHI 742
+ S++ L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 669 LKSSEALYKKYIQKMDE-EPCCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKAL 726
Query: 743 DQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK 802
+ +L ++KP+ + L+++ +P + +L ++EE + E+ E + L + P
Sbjct: 727 KAEQIKYENLLQIKPIIIKVKDLKES-LPQKKEELKKVEELLGESVSEYETLLALIGEPT 785
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNE 862
+ A S+ GD++LLD+ +++ L ++L++Q+ K+ + V +D + A++ + E
Sbjct: 786 HNMELANSMMGDMSLLDEALKDSARLTKDLDQQKGKLPASYDSSVSMDALQAEKNQVSKE 845
Query: 863 LNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMD 922
L T R +++S Q + L L+++KN + +Q+ ++ G L L++R +L
Sbjct: 846 LETERKELDSAQNAFQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLTSFL 905
Query: 923 SVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIK 982
+ +E+ EL K+ P++ L A E + LKK KL + +K Y ++++R+
Sbjct: 906 ATVASEINELKAKIQPLKLNLRAAIDEKERLKKIESDKLAQLNSKYNSYKSTDQDIQRLN 965
Query: 983 LEILNYTK--------------RGTLTQL-----------------------------AA 999
E +Y K R + QL +
Sbjct: 966 KEAEDYAKLDLRNEIKKLDEIIRASKDQLRKLAKCSNQLTVERDLKDNRELKQLEDKESK 1025
Query: 1000 LRESVQKL--------------------NQRKEDIIAKRGVCERTINEINQSIA--NQSL 1037
LRES Q L NQR + + ++G + EIN + + +
Sbjct: 1026 LRESCQTLDKQLGNLDFHSVSKEKVELTNQRDKATV-RKGELLGQLGEINNQVKKLQREI 1084
Query: 1038 EEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+E K +L K N E++++ + I DL +Y LE +I++HS+KM INRL
Sbjct: 1085 DEPRFKESLKNFRKA------NYEIEVTRLCIEDLGQYRLALEWALIQFHSEKMEMINRL 1138
Query: 1098 IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
IREYW +IY +GNDI
Sbjct: 1139 IREYWRKIY----------------------------------------------RGNDI 1152
Query: 1158 DYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
DYI + D +++R+TYNYRVVQ KN E +MR RCSAGQRVLA LIIRL +++
Sbjct: 1153 DYIQVKTDEVSADASADRRKTYNYRVVQSKNYSEIEMRGRCSAGQRVLASLIIRLALAET 1212
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
+ V+ DE T +DRA + +L E NC ++
Sbjct: 1213 FSSNCGVLALDEP----TTNLDRANI-------NSLCEAL--NCI------------VEE 1247
Query: 1275 ASDQKNFQLIVITHDEEFIENLTAI 1299
Q NF LI+ITHDE F+ +L I
Sbjct: 1248 RQSQSNFMLIIITHDENFVSSLGKI 1272
>gi|432895825|ref|XP_004076180.1| PREDICTED: DNA repair protein RAD50-like [Oryzias latipes]
Length = 1311
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 361/1376 (26%), Positives = 679/1376 (49%), Gaps = 178/1376 (12%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D++ I+G+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K+A + E P G
Sbjct: 1 MSKIDKMSILGVRSFGIEDKDKQVIAFFSPLTVLVGPNGAGKTTIIECLKYATSGELPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDPR + + A +KL T N + V + RS
Sbjct: 61 ---------------------SKGGAFVHDPRDAHETDVRAQIKLLFTDVNGEKVSIQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K + + + I+R G + +L E EM + +GVSK +LNNVIFC
Sbjct: 100 MSCTQKAKNNTFKSLEQVITR--MKDGERVSLSSKCGELDREMISSLGVSKPVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FD IF ATKY KALE+++ +LR + Q L Y
Sbjct: 158 HQEESNWPLSEGKALKDKFDSIFAATKYIKALETMR----QLRLKQSVTVKECQVELRYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
KE K Q I K++ S + + I+ ++P+ +L+++ K + + +
Sbjct: 214 KENKEKAQQIRETVAKKEAQLMASKDSIQLIDGQIEPLENRLIEIDTKLGKVLRLDNDIR 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ + +++ EL +++Q+F G ELQ + + +K L + ++ +
Sbjct: 274 LLESRKKQMEQDNKELLETMEQVFQGSDQELQDVYQNHQRTVKDKERRLADCQK----EL 329
Query: 355 QEEKQSHTHINEAQMKL----GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ + +N + L G+L+ + + + T++ +L+ L ++ +S +T
Sbjct: 330 ERAGRECQRLNRVKADLLVEQGRLQLEADRQMQCIKNRDTQVRSLSSYLEMEGYDRSPFT 389
Query: 411 PEEGEGL-------IKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESK 463
+ E ++ + T + ++D+ + E KQ I+ + +K LE
Sbjct: 390 ALQLESFHRHVTQRLEQEKETFSQAMADL-------QEKEQQKQQSIDEMRDKKTGLERT 442
Query: 464 IKSFKQQIEGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
++ K+ ++G K ++L ++ + + S + LQ L +L + ++ +S + ++LK
Sbjct: 443 VE-LKRDMQGKKQQELRSIRADLQRLEGSSTRLQELDNELTKAEHDLQSAVQSSNVEELK 501
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
E+E ++++EL+ +D E+ L +++ LK K K I +K RH+
Sbjct: 502 VEVEELQKEKSELDRTQRQLDQEMQTLNVHTTARTQMEMLKKDKLDKEEQIRKIKSRHNE 561
Query: 583 AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
L P K L+ L S + +IN ++ + K L + E N S+++ LR +
Sbjct: 562 DLVTLLGHFPN---KRELEDWLYSKSKEINGTRDRLAKLNKDLASNEQNKSHTAAELRKK 618
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENE 701
++ L ++ V GS+ E +L ++ +L++ ++ +M+ ++ +I +L EE E
Sbjct: 619 EQQLTSDEEKFFNVCGSQDLEQDLGKLQEDLEKASKQRAMLAGATAVYTQFISQLTEERE 678
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYEN 761
P CP+C R F S+ + ++N +++K++ +P++ N + + + +++ + L+PV ++
Sbjct: 679 PCCPVCQRTFPSESDLQDVINDMQSKLRLVPDKLKNTEQDLKRKERKRDEMMALRPVRQS 738
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
I+++Q+ ++P LR++L + ++ K +++K +T L ++E TA S D++L+D+
Sbjct: 739 IVQVQEKELPELRNRLQTVNRDIERLKADVEKQETLLSRLMSEEDTAKSCLQDISLMDRY 798
Query: 822 IRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRL 877
+ +L ++R++ +Q +K+ GVDL+ QV +++E +++L+T SK++ + +
Sbjct: 799 MMDLREVERKIAQQAAKLH-----GVDLNRTIQQVSQEKQETQHKLDTISSKMDLKRNLI 853
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVA 937
S +++Q L+ + N+ +++L + + LE++ E ++ E ++A
Sbjct: 854 QSQQDQIQMLKSEVNERKAEKLQLSSDMQKQQQLEEQCVEFTTEIQALTRDIREAKEQLA 913
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG----- 992
P+ L Q E +L + K+K E KI ++++ + ++ EI Y G
Sbjct: 914 PLTAALEKLQQEKQSLMELKKQKQEEGREKINGINERVKAITTLEREIHKYVSDGKDQYK 973
Query: 993 ---------TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLK 1043
T TQL + +K+N + + I Q I Q ++E L+
Sbjct: 974 EQKESELQETTTQLHEAEKQKEKIN--------------KEMGNIRQDIDTQKVQERLLQ 1019
Query: 1044 NNLTLLEK----KEAVAK---------------LNEELKLSEIMISDLTK-------YHH 1077
+NLTL ++ +E VAK L +E + E + DL K
Sbjct: 1020 DNLTLRKREEELREVVAKHEALLKDIGNMQVLQLRQERRDVERKLEDLKKNRSIALGRQK 1079
Query: 1078 TLENCVIKYHSQKMR--SINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQ 1135
E+ ++ +H +++R ++ Y ++ ++ +E++I+DL Y+ L+ ++K+HS
Sbjct: 1080 GFEDEIL-HHRKELREDQYDKAEERYKNKMITMRTTELVINDLNLYYKALDQTIMKFHSM 1138
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADV---GTGSEKRRTYNYRVVQKKNGIEQDMR 1192
KM IN++IR+ W Y+G DI+Y+ I +DV + KRR YNYRVV K DMR
Sbjct: 1139 KMDEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRVYNYRVVMVKGDTALDMR 1198
Query: 1193 NRCSAGQRVLACLIIRLFISD--------------------------------------- 1213
RCSAGQ+VLA LIIRL +++
Sbjct: 1199 GRCSAGQKVLASLIIRLALAETLCLNCGILALDEPTTNLDRENIESLALALVDIIKSRSR 1258
Query: 1214 QKNFQLIVITHDEEFIENL---TAIDRAYVVRIVRDHKA-LAETFSRNCGIFALDE 1265
Q+NFQL++ITHDE+F+E L + I+ Y +R +D + +A+ C I +L E
Sbjct: 1259 QRNFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEIAK-----CSISSLSE 1309
>gi|307211956|gb|EFN87868.1| DNA repair protein RAD50 [Harpegnathos saltator]
Length = 1371
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 362/1377 (26%), Positives = 675/1377 (49%), Gaps = 168/1377 (12%)
Query: 1 MALLDQLHIMGIRNFPAD-KNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L + GIRNF D ++ ++RF P+TLI+G NG GKTTIIE +K+A T E+P G+
Sbjct: 1 MSKIRRLSVRGIRNFGDDNEDALLRFSCPMTLILGPNGTGKTTIIEALKYATTGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC--TCENNDTVCVVR 117
GK+F+H DP + +VK + + N TVC
Sbjct: 61 EKGKSFIH--------------------DPNLASTGSIRGVVKAEIVDSIGNMYTVCRTI 100
Query: 118 SLLLSNKNGK--DNCATRDTTISR-KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNN 174
+ + K K DN TR IS+ K T + C ++ L + +GVSK+ILN
Sbjct: 101 ESMKTTKKFKTLDNTLTR---ISKDKKEKTSITNR--CADIDAELSIA--LGVSKSILNY 153
Query: 175 VIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQAT 234
VIFCHQ+ +WP D+GK +K+ FDEIFD+ K+NKALE+I L+ I + A ++
Sbjct: 154 VIFCHQDEFNWPFDQGKTLKDRFDEIFDSKKFNKALENIGKLYKELQVNIRSLTAEKESC 213
Query: 235 LNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY- 293
E S++ + + Q+ L+ +E + I+++L L +K ++M + ++Y
Sbjct: 214 NIVVSEVKSRETKLKDYKQR-------LNTTKEKINVIDKELESLQQKIKDMEQLHSEYK 266
Query: 294 ------QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQ 346
+ KK E M++E +L ++++ +F G EL + + L EK +E+ EN+
Sbjct: 267 NIQAVEEKKKMEYTMLKERYVKLRNTVENIFEGTTEELNVHIQSYDSILKEKNNEITENE 326
Query: 347 ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAK 406
++ +E + S+ + +G L++ + +K L++ LDT
Sbjct: 327 AEIEDISTKEARISNILATRRET-VGTLKQQVKDQEKRIIRRNQLLDDALRVCGLDTVG- 384
Query: 407 SQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELE-SKIK 465
P+ E +K +++ + + LER +N + Q + EK++ E K++
Sbjct: 385 ----PDVSEIEVKALTKRLEQKM---RTLERKLEENRSAMQRQ-----EEKLQKELDKVR 432
Query: 466 SFKQQIEGNK-----------KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
S +IE K D+T + QI ++ + + L+ L+ L ID +SK
Sbjct: 433 SNHSKIESEKILKEKEVTEIRNDVTAIRNQITQIGAAGNKLKSLEEALQTAKQRIDDISK 492
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
LD D +K +I++ ++ R+++E+ L +D EIS L + AE + K+ ++K +
Sbjct: 493 MLDVDSVKADIKSKVKSRDKIEESLSAVDDEISSLHKLSSLTAEFELKKSTLQAKEEEFE 552
Query: 575 LLKERHDRAFHLLFDMIPE---ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN 631
LK +H L + +PE ++SL + + + N + +I A+E+ LE
Sbjct: 553 NLKRKHGEDIKTLLN-VPELQHTKLRSSLQRVHQQLEKESNSLTREIQAQERRTTALETT 611
Query: 632 VSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFN 691
+ + + ++ ++ +V K F++ L + +K Q++ + +
Sbjct: 612 MRHMEFDIAKKRTEFERDKQKISVVCDYKDFDETLLMQSKIVKDLQDQRGVYAYQATAYK 671
Query: 692 SYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR- 750
YI KL +P CPLC R F+ V L+ ++++ I I Q + K ++L +Q+
Sbjct: 672 EYIKKLSMKDPCCPLCHRDFQEQKKVTELIKEMESDI--IRNQPSRLKRCEEELKTEQKK 729
Query: 751 --SLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTA 808
++ +LKP+ E I++ ++ D+ L +L + + N+ ++K +K L+ + P+ K
Sbjct: 730 YDNMLQLKPIVEKIIQCEENDLKKLDERLEKTKNNLTQSKMCVKTLEGSKAEPEKKLMLW 789
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQESKISGMR-STGVDLDQVLAQQKEKKNELNTFR 867
++ GD+ L D+ + E+ L+ ++ +++++ T +++ Q+++ K R
Sbjct: 790 KNIIGDIQLWDRCVDEIRHLKTTVDNMQTQMANAGIQTQRTMEEAQTQREQLKKSFKEIR 849
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
S IE+ +LN HNEKLQ + N++H KQL + LK L+D++ +L +
Sbjct: 850 SHIENLHLKLNKHNEKLQDARATYNELHEKQLQIHSDMQKLKHLKDKQEDLYTREVNVAE 909
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
+E+L + +E QLN + L+ K E+ +K + + + T++L ++ I E+ +
Sbjct: 910 AVEKLREDLMVVEDQLNSSIQILEKTKAENWQKQETDRKSVAENTRRLSDLHNIIDEVES 969
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
+ +L + ++ + ++ R E+TI ++ + +A Q +++ ++ +N+T
Sbjct: 970 FINSNVSEKLTSYERDIETHQKSLAELTNLRKNVEQTIGKLKEDVATQEIKKREMLDNMT 1029
Query: 1048 LLEKKEAVAKLNEE-----LKLSEIMISDLTKYHHTLEN--------------------C 1082
L E KE + L EE L+L ++ ++++ LEN
Sbjct: 1030 LRETKEGMETLKEEHRQLALQLKDMNYNEISTKLKMLENERQTTLRQRNVSLGKQEELER 1089
Query: 1083 VIKYHSQKM-RSINRLIREYWT-RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSI 1140
VI+ ++Q++ + + RL R +T + +L + E I++L Y L+ +I+YH ++M ++
Sbjct: 1090 VIEQYTQELQKEVYRLARRNYTDKCIELAVEEDTIANLKAYSQILDAAMIEYHEERMATV 1149
Query: 1141 NRLIREYWTRIYQGNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
N+++++ W IY+G D I I + G GS RR+YNY+++Q K+G E DM+ RCSAG
Sbjct: 1150 NKIMKKLWKHIYKGTDTSSIQIRTEPTDGVGS-NRRSYNYKLIQTKHGCEMDMKGRCSAG 1208
Query: 1199 QRVLACLIIRLFISD----------------------------------------QKNFQ 1218
Q+VLA +IIRL +++ QKNFQ
Sbjct: 1209 QKVLASIIIRLALAETFCKDCGILALDEPTTNLDEENANSLADTLTKVVEMRSKHQKNFQ 1268
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL-----DEPTTNL 1270
LI+I+HDE+F++ L ++ +HK E + + G+ A+ +EPT +L
Sbjct: 1269 LIIISHDEKFLQKLADLN---------NHKKFHELYRKQNGLTAVKISDFNEPTNSL 1316
>gi|431892676|gb|ELK03109.1| DNA repair protein RAD50 [Pteropus alecto]
Length = 1267
Score = 402 bits (1032), Expect = e-108, Method: Compositional matrix adjust.
Identities = 342/1264 (27%), Positives = 651/1264 (51%), Gaps = 104/1264 (8%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP+I ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKIAQETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+I+ R +++ E Q L Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETIRQVRQTQGQKVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNN-TQKRDQ---SFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K I N K DQ S E + E + P+ +L ++ + + + + +
Sbjct: 214 KQNKEKACEIRNQIASKEDQLTSSKEIVKAYENELDPLKNRLKEIEQNLAKIMKLDNEIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ + +++ +ELE ++++F G +L + + + EK +L + +R +
Sbjct: 274 ALESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCQRELEKLN 333
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+E + + +E ++ G+L+ + H++ + + +LA L LD + ++ +
Sbjct: 334 KESRLLNQEKSELLVEQGRLQLQADRHQENIRARDSLIQSLATQLELDGFERGPFSERQI 393
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
+ K+ + +K L F++ E KQ +I+ + +K+ L +I K +I
Sbjct: 394 KNFHKLVRERQEKEAETANQLMNDFAEKETLKQKQIDEIRDKKIGL-GRIIELKSEILSK 452
Query: 475 KK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ +L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 453 KQNELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNIETLKTEVISLQNEKA 512
Query: 534 ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE 593
+L+ L +D E+ L T +++ L K K I +K RH + L P
Sbjct: 513 DLDKTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELNSLLGYFPN 572
Query: 594 ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRM 653
K L+ L S + +IN+ ++ + K L + E N ++ S L+ ++ L+ D++
Sbjct: 573 ---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHMSNELKRKEEQLSSYEDKL 629
Query: 654 ELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFE 712
V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+
Sbjct: 630 FDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRMFQ 689
Query: 713 SDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPS 772
++ + +++ L++K++ P++ + ++ + + K++ + L P+ + I+ L++ +IP
Sbjct: 690 TEAELQDVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQGIIDLKEKEIPE 749
Query: 773 LRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQREL 832
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R++
Sbjct: 750 LRNKLQNVNRDMQRLKNDIEEQETLLGTIMPEEESAKQSLTDVTIMERLQMELKDVERKI 809
Query: 833 ERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
+Q +K+ G+ DLD QV +++EK+++L+T SKIE + + E++Q L+
Sbjct: 810 AQQAAKLQGL-----DLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLK 864
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQ 947
N++ S++L + + LE++ E + S+Y+ E+++ +++P+ET L Q
Sbjct: 865 SITNELKSEKLQISTNLQRRQQLEEQTVEFSTEVQSLYR-EIKDAKEQISPLETTLEKFQ 923
Query: 948 SELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQ 1005
E + L KK K+ ++ KI D ++++ + I NY + G ++ +
Sbjct: 924 QEKEELVYKKNTSNKITQD--KINDIKEKVKNIHGYMKNIENYIQDG--------KDDYK 973
Query: 1006 KLNQRKED-IIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL--------- 1048
K + + D +IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 974 KQKETELDKVIAQLSECEKRKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1049 -----------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+ + + + N+ KL E + + K +H+L K + +++ +
Sbjct: 1034 VEEEREQHLKEMGQMQVLQMKNDHQKLEEKI--ENIKRNHSLAIGRQKGYEEEIMHFKKE 1091
Query: 1098 IREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+R+ R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1092 LRDSQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLW 1151
Query: 1149 TRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
Y+G DI+YI I +D S+KRR YNYRVV K DMR RCSAGQ+ +
Sbjct: 1152 RSTYRGQDIEYIEIRSDADENVAASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKAESSP 1211
Query: 1206 IIRL 1209
I L
Sbjct: 1212 ITGL 1215
>gi|345489328|ref|XP_001600265.2| PREDICTED: DNA repair protein RAD50-like [Nasonia vitripennis]
Length = 1363
Score = 402 bits (1032), Expect = e-108, Method: Compositional matrix adjust.
Identities = 366/1398 (26%), Positives = 673/1398 (48%), Gaps = 166/1398 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRV-VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + L I GIRNF ++ +V + F +PLTLI+G NG GKTTIIE +KF + EYP
Sbjct: 1 MSRIKDLEIRGIRNFGDERAKVLIHFSKPLTLILGPNGTGKTTIIEALKFVTSGEYP--- 57
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
+ GK+FVH+P++ VK + ++ + ++R++
Sbjct: 58 -----------------PDSDRGKSFVHEPKLTLNHTVRGQVKAKILDKSGQELVIIRTM 100
Query: 120 LLS-NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+S K G D TI+R T + + + EM +GVSK ILN VIFC
Sbjct: 101 QVSRQKTGALKFQALDNTITRLDARTKDKIQITNRCSDIDREMLAAMGVSKPILNYVIFC 160
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLNY 237
HQE S+WPL++GKK+K+ FDEIFD +KYNKA+++I K+ +D L EI +KA +A
Sbjct: 161 HQEESNWPLEDGKKLKDRFDEIFDTSKYNKAMDTITKLIKD-LNSEINTLKAREEAFKEI 219
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
EA+ ++ + NN Q+ + +++ I++S+ P+ E++ Q+ + + + + Q +
Sbjct: 220 LNEAEDQESKLRNNEQREKEVQDKITVIDQSVVPLEERMKQILDVKSDYQKLEDQLNKVE 279
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEE 357
T+ + L+ IKQL +G K EL KL+ + NL +K + + E + E
Sbjct: 280 TDYKVTNNYIESLKKHIKQLHTGSKEELVDKLDSYDQNLTQKVTIKKKSEEKLEETEHCE 339
Query: 358 KQSHTHINEAQMKLGKLERDEETHKKLN-DTLKTKLNNLADTL--CLDTTAKSQYTPEEG 414
+ +A++KLG L T KK+ D TK N L + T EE
Sbjct: 340 NTLLKKLADARIKLGSL-----TQKKIAFDEKITKRNELLKKAFKTWEIPQVDSVTEEEA 394
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
+ I+ + ++ +K + F E Q E++A EK ++S++ S K++ G
Sbjct: 395 KDYIERISRKVKEFSIAMKKRAQEFEQEEKHVQREVDACRSEKTGIDSEM-SLKEKERGE 453
Query: 475 -KKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K ++ + +I +V++ L L+ L + + ++ D ++ +E +
Sbjct: 454 IKFEINTLRKKIKQVDEDGGRLDSLEADLQNATENFNTVVQNFDEKFIRETLEREASNKK 513
Query: 534 ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF-DMIP 592
E ++L ID EI+ L Q+ AE++ +N K +I++L+ +++ +LLF + IP
Sbjct: 514 EFNNQLNNIDNEINFLNKQSSQQAELELHQNSLLKKEEEISVLRNKNESNLNLLFSNAIP 573
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
++ K+SL+K S++ + + + I ++ T + + + L L ++
Sbjct: 574 QQKLKDSLEKIQKSLSAEKTNLLKQIEEGQQKFTTYKTTLKHKESELSKTVSELEACKEK 633
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFE 712
+ +++ L ++K ++ + S ++ Y+ K+ + + CPLC R F
Sbjct: 634 VAFECQENDYDEMLALQERKVKALNDQRGIYASQSSMYEEYL-KILKKKSCCPLCDRGFH 692
Query: 713 SDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPS 772
+ L KL ++I++ P+ + + + Q + +LQ+LKPV + I ++++ +P
Sbjct: 693 NSSEENSLEQKLHSEIRKSPQALKDCEKELKQEQARYDALQQLKPVRDQIREIENNKLPK 752
Query: 773 LRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQREL 832
LR+ + +++ + +++ L+ L+ L P+ K S+ GD+ LLD I + + L + +
Sbjct: 753 LRTDVEKIKNQLQDSEQSLETLRLILSEPEEKLCIYKSIIGDVILLDSYINQRDHLTQTI 812
Query: 833 ERQESKISGMRSTGVDLDQVLAQQKEK----KNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
E +K M G D+ + + +++ K+ L+ ++ Q L S EK+ +
Sbjct: 813 E---TKKREMARAGKVSDRTMQEAQDERQKLKDRLSAVERNVDKAQLALQSGQEKVSRAR 869
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
+QKN ++ + L ++ G L+D+ +L ++ + L+ L + + + +L
Sbjct: 870 EQKNKLNEEVLKIRQGQQESSQLKDKVNDLYKKETYLENSLKSLRQNLVIADEELESKVQ 929
Query: 949 ELDALKKEHKKKLNEE-------GAKIQDYT---KQLEEVKRIKLEILNYTKRGTLTQLA 998
EL+ LK+++++K + G + + + K+++EV KLE L
Sbjct: 930 ELNDLKRKNREKQESDMNFKSISGTEFHELSTVQKEVQEVMASKLE----------ENLE 979
Query: 999 ALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKL 1058
+ V+K + + A++ E I +++ +Q + + DL+NNL L++K+E + L
Sbjct: 980 KIETDVEKTKTECDKMKAEKARLEEHIRFLDEQCRSQEVGKKDLENNLDLIKKQEFINDL 1039
Query: 1059 NEELKLSEIMISDLTKYHHTLENCV---IKYHSQKM------------------------ 1091
N +TKY TLEN ++ Q++
Sbjct: 1040 N----------IKITKYRTTLENMQFNKLRKEYQELQEKKDKFEKEKNEYKGALGELEIA 1089
Query: 1092 -----RSIN----RLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSIN 1141
+S+N R+ R Y + Q+ + E + +L +Y L+ +I++H ++M ++N
Sbjct: 1090 IRNYKKSLNQEKYRMARHNYKEKQLQVVVQEEAVKNLKEYVTVLDKAMIQFHEERMNTVN 1149
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVGTG-SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQR 1200
+++R+ W IY G+D I I G +K+R+YNY++VQ K E DM+ +CSAGQ+
Sbjct: 1150 KIMRQLWQLIYSGSDTTSIQIRVQTTEGIGDKKRSYNYKLVQVKRSAEMDMKGKCSAGQK 1209
Query: 1201 VLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGI 1260
VLA +IIR+ ALAETF +C +
Sbjct: 1210 VLASIIIRM---------------------------------------ALAETFCSDCAV 1230
Query: 1261 FALDEPTTNLDIKNAS---------------DQKNFQLIVITHDEEFIENLTAIDRAYVV 1305
ALDEPTTNLD +NA+ + KNFQLIVI+HDE+FI +L+ + +
Sbjct: 1231 LALDEPTTNLDDENATNLAVTLSKVIQLRAQNHKNFQLIVISHDEKFISSLSNLSGKQMF 1290
Query: 1306 R-IVRDHKGLSDIHLRSL 1322
+ + R+ +G S + R +
Sbjct: 1291 QELYRNPEGYSLVKRRDM 1308
>gi|321465214|gb|EFX76217.1| hypothetical protein DAPPUDRAFT_322547 [Daphnia pulex]
Length = 1334
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 373/1392 (26%), Positives = 680/1392 (48%), Gaps = 153/1392 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +DQL I GIRNF +D V++F+ P+TLI+G+NG GKTTIIE +K+A T E P G
Sbjct: 1 MSRIDQLSITGIRNFSSDSAEVIKFEPPVTLILGKNGSGKTTIIESLKYATTGEVPSG-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G+ G++F+HDP + + +KLQ E+N+ V RS+
Sbjct: 59 TGR------------------GQSFIHDPNLSTNKISIGSIKLQFFDEHNNKFIVTRSME 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
K + T D TIS + G K+ + +CN +GVSKA+LNNV+FCHQ
Sbjct: 101 ARILKSKMDFKTIDGTIS-IVQPDGTLKSHKNKNNDLNTFVCNTLGVSKALLNNVLFCHQ 159
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY----QATLN 236
E+S+WPL+E KKVK+ FD+IF+ T+Y K +D +RK++ E+KA +
Sbjct: 160 EDSNWPLEEAKKVKDKFDDIFNTTRYVKC-------QDEIRKQMIEVKAKMKDIEKMVDR 212
Query: 237 YKKEADSKKQLIYNNTQKRDQSFE-----ELHNIEESMKPINEKLVQLTEKERNMSVMST 291
YK + D ++ + N Q+R + E+ ++++ ++ KL Q ++ R
Sbjct: 213 YKMQKDQAEE--FQNDQRRHTERKAILEAEMQQLQKTKTELDAKLKQSMDQYREAEKTKA 270
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ Q KK + ++ + ++LES I ++ + +L+ ++ F++ E+ EL +R
Sbjct: 271 EIQRKKVRMEELERNRHDLESDITRVITASVEDLEREIQRFQMTKGEREKELNVLQRELQ 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTK---LNNLADTLCLDTTAKSQ 408
+ Q K + E ++LGKL+ +EE H N+ +K + L+NLA + S
Sbjct: 331 RVDQSGKINAAAQQEQLVQLGKLQSEEEQH---NNRIKERDCLLSNLARS--YQWPGHSA 385
Query: 409 YTPEEGEGLIKMSQ------TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELES 462
+ + +++SQ T+++ +L++ + E +N L E V LE
Sbjct: 386 FLSNQPLSSVQVSQYQDLLKQTVEQEKHKESVLKQELENEERRLLNSLNKLREECVRLEQ 445
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
IK+ + +++L+ + +++ + ++ + +L+ + + +D+ + L+ D+L
Sbjct: 446 DIKAKDTFLNTCQRELSEIEAKLDAMEENSRQMTILERQQVEAQTLVDRAKRELNEDEL- 504
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
IR + + E + +AE+ ++Q + + ++ + E D++ + + R
Sbjct: 505 ------IRNIDRAKSEKVMQEAELDHCRSQLKKVMGQRDIRVKLEMHQKDLSSKRTQERR 558
Query: 583 AFH----------LLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
L+ D ++N + + L SIT ++ Q ++ + T EAN+
Sbjct: 559 LMSRETVEDAIKILVGDNANQDNLLSYYNGRLKSITASLSSKQHNLTKLGQEGATCEANL 618
Query: 633 SNSSKTLRDQKRTLAELMDRMELV--LGSKPFEDELDRVTLELKREQEEVSMMTSTQYLF 690
N L ++ L+ +++ G+ E+++ R+ LE++ ++ ++ ++ ++
Sbjct: 619 RNIRSQLDSKQSELSAHQQKLKNAGSSGAAELENDIARLALEIQDLDDQRGLVHGSEKMY 678
Query: 691 NSYIGKLEENEPR--CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ 748
N +I K+E+ CPLC R F+ LV++LK +++ +P KK +D+ +
Sbjct: 679 NHFIEKMEKQRAHADCPLCHREFDDADESLVLVDELKGRVEAMP----TKKADLDRKIAE 734
Query: 749 QRS----LQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTK 804
++S L +L+PV ++I KL + +IP L S L +LE + +L+ L+ ++E K +
Sbjct: 735 KKSKHGQLLQLRPVAQSIAKLAEAEIPKLESGLKDLESRSSIIQVDLRDLEESIEFLKNE 794
Query: 805 EKTALSLQGDLTLLDQ---NIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKN 861
E D+ LD +I++L +L ++ Q S V+ Q ++ E
Sbjct: 795 EDIGKKAHPDIIQLDAVKTDIKKLQSLVDNIQAQLGLSGAEGSLTVEEVQEQVEKAEASY 854
Query: 862 ELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM 921
L T IES R N H KL LQ+ N + ++L + +L +RK LE
Sbjct: 855 RLTT--QSIESMNDRYNGHQNKLTQLQQNVNRLMERKLQLNNNLQQRGNLLERKTTLETD 912
Query: 922 DSVYQTELEELGRKVAP-IETQLNLAQSELDALKKEHKKKLNEEG-AKIQDYTKQLEEVK 979
+ ++EE + + P + QL + +D+ KK + L E+ K+++ QL +
Sbjct: 913 IEKARLDVEEWKQNLQPMVAKQLAAQATHVDSQKK--RNSLTEQARRKVEELLNQLRALA 970
Query: 980 RIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEE 1039
EI ++ G + QL ++ V++L K + ++ + +I +++N EE
Sbjct: 971 SFDKEIEKWSADGKVAQLQHSQQEVERLKVEKLALEQRKMEIQENAKKIELALSNCENEE 1030
Query: 1040 IDLKNNLTLL-----------EKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYH- 1087
+L+NNL L+ E + +A L E KL + ++ ++ + LE C I+
Sbjct: 1031 RNLRNNLKLIVNTTDRQVVKQELDQLIATL-ETFKLQQ-LVKEIQRLEEQLERCKIRLGE 1088
Query: 1088 -SQKMRSINRLIRE----------------YWTRIYQLKLSEIMISDLTKYHHTLENCVI 1130
+ + I + IRE Y ++ ++ + + DL +++ LE+ ++
Sbjct: 1089 LNGTFQEIEKSIRELEVKLRREEFATAEERYLDQVKDFEIHQGISEDLANFYNALESALM 1148
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD--VGTGSEKRRTYNYRVVQKKNGIE 1188
K+H ++M INR++RE W Y+G DIDY+ I A+ G RR YNYRVV KNG+E
Sbjct: 1149 KFHKERMSVINRMVREMWHSTYKGKDIDYVEIHAEESGALGVNSRRQYNYRVVMVKNGVE 1208
Query: 1189 QDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHK 1248
DMR RCSAGQ+VLA LIIR+ +++ + + V+ DE T +D +
Sbjct: 1209 MDMRGRCSAGQKVLASLIIRMALAEAFSSKCGVLALDEP----TTNLDEDNIA------- 1257
Query: 1249 ALAETFSRNCGIFALDEPTTNLDIKNA--SDQKNFQLIVITHDEEFIENLTAIDRA-YVV 1305
+L++T L++ NA ++ FQLIVITHDE+F+E ++ R
Sbjct: 1258 SLSDTI---------------LELSNAITRQKRKFQLIVITHDEKFLERMSRDKRMEKFY 1302
Query: 1306 RIVRDHKGLSDI 1317
R+ R+ LS+I
Sbjct: 1303 RVDRNRFNLSEI 1314
>gi|195119820|ref|XP_002004427.1| GI19621 [Drosophila mojavensis]
gi|193909495|gb|EDW08362.1| GI19621 [Drosophila mojavensis]
Length = 1312
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 370/1360 (27%), Positives = 656/1360 (48%), Gaps = 134/1360 (9%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I G+R+F A+ + + F P+TLI+G+NGCGKTTIIEC+K+ALT EYP G
Sbjct: 1 MSTIEKLSIQGVRSFGVNAEDMQSITFSSPITLILGQNGCGKTTIIECLKYALTGEYPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+SSGKN FVHDP I K+E+ A VK+ N + + RS
Sbjct: 61 SSSGKN--------------------FVHDPNIFDKNESLAQVKMLVCDRRNVQMSICRS 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATG-------VQKNLGCLQQESVLEMCNLIGVSKAI 171
+ ++ T D+TI+ F G Q+++ + + + + +GVSKAI
Sbjct: 101 MKVTKVRAGLTFKTIDSTIN---FLGGDGKPSKNSQESMSSRVINTDMAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+N+V+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ + A+
Sbjct: 158 INSVLFCHQEDSSWPLDEPKKLKEKFDAIFGITEYNKALDRIIKLRKTAVEELKVMNANL 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ ++KKE D K + N +K ++ EE +E +KPI+ +L ++ RN+
Sbjct: 218 KLLEHFKKEMDEKTMNLQNAQRKCEEIKEECIKCDEEVKPIDARLKEI----RNIEYEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE 347
+YQ +K + D +SC E L IK F G EL++++ F + E +L + E
Sbjct: 274 EYQAEKVKVDTKHQSCVEQIAKLNRQIKTPFEGSLVELEAEIRSFSQRMSEIKYQLTDVE 333
Query: 348 RLKSQYIQEEKQSHTHINEAQMKLGKLERDEE-THKKLNDTLKTKL------NNLADTLC 400
Q +Q+ K E Q L K +R+ +KL + KL L+ L
Sbjct: 334 ---EQLLQKRKSKE----EQQKTLAKQDRERYVAQQKLKSEQECKLELSRHIQTLSAQLQ 386
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVEL 460
L+ A P++ L+ + +I L ++ + +Q +I+ L E +
Sbjct: 387 LNVEASVVDNPQKLIDLLDDIDGNLMAKQCEITELSQSNDQADQARQEKIDELRNELTKS 446
Query: 461 ESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQ 520
E IK+ ++Q ++D+ ++ I ++ SQ L+VL+ ++ + + +++ + +
Sbjct: 447 EQSIKTQEKQKADTERDIESLELNIKQIETSQQQLKVLEKQIADTTEKYEHSTRNFNQEA 506
Query: 521 LKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH 580
+ I + R++ + + +D +++ L + EI + E K ++ ++ +H
Sbjct: 507 CRKVIASKKANRDKKQAQFKQLDDQLTFLSSIANVKTEIGLKEKELEKKNHEVQRVRSKH 566
Query: 581 DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLR 640
F N++ ++ + +I+ + D N K + E N + +
Sbjct: 567 ADNLSKFFKESISSNYRRAMQNEYDKLRREIDELNVDANGKNLAKQSHEIKRKNLIEEIA 626
Query: 641 DQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEEN 700
++ + + +R+ KP+++ L R ++ + Q E + S + ++ YI K+ E
Sbjct: 627 RMEKEVQDSEERIYQKCHGKPYDELLLRSKTDIAKLQLEHGALKSAEAMYKKYIQKINE- 685
Query: 701 EPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYE 760
EP CPLC D + L +L +I+++P D + + ++SL+ + YE
Sbjct: 686 EPSCPLCHHNMSGDEAC-DLTTELTDEIQKLP----------DNISRTEKSLKTEQSKYE 734
Query: 761 NIMKLQDT---------DIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSL 811
+++++ T +P + +L +E+++ + E + L L P A S+
Sbjct: 735 QLLQIKPTIDKVKELKEKLPKKKEELRTIEQSLGDIVSEYETLMARLGEPTHNMDLANSM 794
Query: 812 QGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIE 871
GD+TLLD+ ++E ++++LE+ + K+ V ++ + Q+ E EL +E
Sbjct: 795 LGDMTLLDEALKESVRVKKDLEQLKLKLPDNYDASVSIEDLQKQKAEVSRELEAESKALE 854
Query: 872 SGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE 931
+ Q E L L++ N + K++ +Q G L L++R +L M TE+ E
Sbjct: 855 TSQQAFEQQVEALSRLREFLNGLKDKRINLQEGVQNLPQLKERLDKLTRMVIAIGTEVTE 914
Query: 932 LGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRI--------KL 983
L K+ PI+ +L A SE LK+ + KL + AK +Y ++++R+ KL
Sbjct: 915 LRSKLQPIKQRLGAALSEKARLKEIERVKLEQLQAKYMEYKSIDKDIQRLNDQAQEFAKL 974
Query: 984 EILNYTKRGTLTQLAALRESVQKL----NQRKEDIIAKRGVC------ERTINEINQSIA 1033
+++N K+ + + A +E + L N++ +++ A + C ER + + N+ +
Sbjct: 975 DLVNAIKKFDAS-INATKEELSNLDTHINEKNDELEAIKKKCFDQQALERDLKD-NRELK 1032
Query: 1034 NQSLEEIDLKNNLTLLEKK------EAVAKLNEEL----KLSEIMISDLTKYHHTLENCV 1083
L+E L + L K+ +V K EL ++ + +L + N V
Sbjct: 1033 QLQLKESALSEDCKRLAKQLGNLDFRSVTKEKNELIRKRDVATVRRGELLGQQGEINNQV 1092
Query: 1084 IKYHSQKMRS-INRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
K + ++ Y +++ + + I DL ++ L+ +I++H +KM +IN
Sbjct: 1093 NKLQKEMAEPRYKESMKNYMRAKFEVAVKQCGIEDLGRHRQALDWALIEFHKEKMNNINS 1152
Query: 1143 LIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQ 1199
LIREYW IY+GNDIDYI I D T +++R+ YNY VVQ KN DMR RCSAGQ
Sbjct: 1153 LIREYWRMIYRGNDIDYIQIKTDDSPSDTAADRRKNYNYCVVQSKNNSVIDMRGRCSAGQ 1212
Query: 1200 RVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCG 1259
RVL LIIR+ +++ + V+ DE T +DR ++ +L + +R
Sbjct: 1213 RVLGSLIIRMALAETFSSNCGVLALDEP----TTNLDRDNIM-------SLCDALNRI-- 1259
Query: 1260 IFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
+++ Q NF LI+ITHDE FI +L I
Sbjct: 1260 ------------VESRQHQSNFMLIIITHDENFISSLGKI 1287
>gi|380028059|ref|XP_003697729.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Apis
florea]
Length = 1383
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 369/1384 (26%), Positives = 681/1384 (49%), Gaps = 178/1384 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ + +L I GIRNF +K ++RF RPLTLI+G NG GKTTIIE +KFA E+P G+
Sbjct: 1 MSRIRRLSIRGIRNFGDEKEEALIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK+F+H DP + +++ + +T + R++
Sbjct: 61 DRGKSFIH--------------------DPTLSTTSSVRGVIRAEIIDVIGNTYTICRTI 100
Query: 120 LLSNKNGKDNCATRDTTISR--KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
+ N T D+ +SR K + C ++ L + +GVSK IL+ VIF
Sbjct: 101 ESTKANVTVRFKTLDSALSRVNKDTKEVISITNRCTNVDTELTLA--MGVSKPILDYVIF 158
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEI---PEIKAHYQA 233
CHQE+ +WP +GKK+KE FDEIFD+ K+NKALESI K+ +D L++ + E K +YQ
Sbjct: 159 CHQEDLNWPFQDGKKLKERFDEIFDSAKFNKALESIMKLIKD-LKQRVNILKEQKQNYQF 217
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
T+N E K+ + +N ++ + S ++ + ++P+ +K+ +L + + + ++
Sbjct: 218 TVN---EVIDKETKLEDNKKRLENSKIKIEEFNKELEPVIQKIKKLEKIDVEYKDLQSEQ 274
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
+ KK E DM ++ + L+ +++ +F +L ++ + L +K +E++ ++
Sbjct: 275 KRKKAEYDMFKQQLDSLKENLQNIFEDTTEKLLKEIESYDEELIKKINEIDEFKKSLRDI 334
Query: 354 IQEEKQSHTHINEAQMKLGKLERDEETHKK--------LNDTLKTKLNNLADTLCLDTTA 405
++E + ++ G L + + H+K LN++L + N+ D+ +
Sbjct: 335 AEKESTISNKLANERVTNGSLRQQIKDHEKKVILRNQILNESLSSWNLNVVDSNVVSELE 394
Query: 406 KSQYTPEEGEGLIKMSQTTIDKYLSD----------IKILERTFSDNENTKQAEINALIV 455
+T E + ++ + + + IL +S
Sbjct: 395 IIAFTKRLQEKMRELEHKLEENKIKREEEEKELQKIVDILRHKYS--------------- 439
Query: 456 EKVELESKIKSFKQ-QIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
K+++E K+FK+ +I +K++ + I ++N + L +++KL +V + I QL+
Sbjct: 440 -KLDIE---KNFKENEIIETRKEIDKIKLDIMQLNAESNKLNFIESKLQKVQTRIQQLND 495
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+++ D +K EI I+ R+E++ L ID EI++L Q+ E++ K+ K +I
Sbjct: 496 AINVDTMKKEIADKIKIRDEMDTLLNTIDEEITLLLKQSSLQTELELNKSTLLIKEKEIE 555
Query: 575 LLKERHDRAFHLLFDM--IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
LK++H+ L ++ I + KN+ D + +I I ++I +E + TLE +
Sbjct: 556 KLKKKHEEKIISLLNIKDISQIKLKNNFDMVQKELINEIESINQNIRTEEHQIATLETTI 615
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
S+ L+++K+ + +++ + K F++ L + ++K Q++ M T +
Sbjct: 616 SHIEHELQNKKKEINLNKEKISSICSYKNFDEVLLLQSKKVKDLQDKKGMYTHQSAAYKE 675
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
YI +L P CPLC R F+ ++ L+ +++T+I+ P + + + ++ +
Sbjct: 676 YIKQLRNTNPCCPLCHRGFDKIETITTLLKEMETEIENHPNRLKECEKELKVQQEKYDKM 735
Query: 753 QELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQ 812
+LKPV E I++L++ ++ L S L + + + E++ +LK K +
Sbjct: 736 LQLKPVVERIIQLEEIELEKLTSNLEKFKNKLNESQTTAIELKXQKIXSXKKLVMCKDII 795
Query: 813 GDLTLLDQNIRELNTLQRELERQESKISGMR-STGVDLDQVLAQQKEKKNELNTFRSKIE 871
GD+ L D I ++ L++ ++ +++ T L + +++E K L R IE
Sbjct: 796 GDVMLWDTYIDDIFKLKQIIDDFHIRMAAAGIKTKRSLQEAQTEREELKISLKKIRENIE 855
Query: 872 SGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE 931
Q+ +N HNEKL + Q+++N +H +QL +Q LK L+D + +Y E+
Sbjct: 856 RLQSEINMHNEKLHNAQQEENILHKEQLKIQLDMQKLKELKD------NQEILYLKEIS- 908
Query: 932 LGRKVAPIETQLNLAQSELDA-LKKEHKKKL---------NEEGAK-IQDYTKQLEEVKR 980
LG+ + + ++ L+++EL++ L K KKK E K I + +++L ++++
Sbjct: 909 LGKSIDTLREEVTLSETELNSGLDKLEKKKYIFHKDNWEKQETDRKLITEGSRRLSDLQK 968
Query: 981 IKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEI 1040
++ ++ ++ R L ++ + ++ K+ E TIN++ + + Q + +
Sbjct: 969 MQDDVDSFIYRKIPESLECSESKIKSYEKLLNELFCKKNDMETTINKLKEEMTRQEVRKR 1028
Query: 1041 DLKNNLTLLEKKEAVAKLNEEL-----KLSEIMISDLTKYHHTLENC----------VIK 1085
+L +NL L E +E + L E+ +L+ I S++ L+ C +IK
Sbjct: 1029 ELLDNLKLRETQEIINNLQEQYSNIKERLNTINYSEIFDEWQNLQ-CREQTILRQKNMIK 1087
Query: 1086 YHSQKM-RSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKY 1132
+ +++ R++ + I+E Y ++ +L + E I +L +Y L+ +I+Y
Sbjct: 1088 GNQEELERTVQQYIQELKKDIYKQARKNYKSKCIELTVIEESILNLKEYSKVLDTAMIQY 1147
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQD 1190
H ++M ++NR+I++ W +Y G D I I D G G KR TYNY++VQ K+G E D
Sbjct: 1148 HEERMTTVNRIIKQLWKLVYTGTDTTSIEIRTDATEGIGGTKR-TYNYKLVQMKHGHEID 1206
Query: 1191 MRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKAL 1250
M+ RCSAGQ+VLA +IIRL AL
Sbjct: 1207 MKGRCSAGQKVLASIIIRL---------------------------------------AL 1227
Query: 1251 AETFSRNCGIFALDEPTTNLDIKNASD---------------QKNFQLIVITHDEEFIEN 1295
AETF ++CGI ALDEPTTNLD +NA QKNFQLIVI+HDE+F+
Sbjct: 1228 AETFCKDCGILALDEPTTNLDQENADSLANTLATVVKLRSQHQKNFQLIVISHDEKFLFK 1287
Query: 1296 LTAI 1299
L +
Sbjct: 1288 LAEL 1291
>gi|440912189|gb|ELR61781.1| DNA repair protein RAD50 [Bos grunniens mutus]
Length = 1304
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 351/1335 (26%), Positives = 658/1335 (49%), Gaps = 169/1335 (12%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + + ++
Sbjct: 218 EKACEIRDQITSKEAQLTSSREIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALES 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGSDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
++ + +K L F E KQ +I+ + +K +EL+S+I + KQ
Sbjct: 398 RLVRERQEKEAETASQLLNDFVRKEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 455 ---NELKNVKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVETLKTEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTATRTQMEMLTKDKADKDEQIRKIKYRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINIELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRGF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGAIIPEEESAKVCLTDVTIMERLQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+ DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQGL-----DLDRSVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ N++ S++L + + LE++ EL TE++ L R++ + +LN+
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVEL-------STEVQSLHREIK--QAKLNVKS 914
Query: 948 S------------ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG--- 992
S EL L ++ E+ I Y K +E NY + G
Sbjct: 915 SFMIIFPSVKERTELKELSCSSINEIKEKVKNIHSYMKDIE----------NYIQDGKDD 964
Query: 993 ----TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
T+L + + + ++ KE I + G+ + Q I Q ++E L++NLTL
Sbjct: 965 YKKQKETELNKVIAQLSECDKHKEKINKEMGI-------MRQDIDTQKIQERWLQDNLTL 1017
Query: 1049 --------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHS 1088
+ + + + NE KL E + D K +H+L K +
Sbjct: 1018 RKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKI--DNIKRNHSLAIGRQKGYE 1075
Query: 1089 QKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRS 1139
+++ + +RE R + K E+MI DL Y+ TL+ ++K+HS KM
Sbjct: 1076 EEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEE 1135
Query: 1140 INRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCS 1196
IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCS
Sbjct: 1136 INKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCS 1195
Query: 1197 AGQRVLACLIIRLFI---------------------------------------SDQKNF 1217
AGQ+ A LIIRL + S Q+NF
Sbjct: 1196 AGQKA-ASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNF 1254
Query: 1218 QLIVITHDEEFIENL 1232
QL+VITHDE+F+E L
Sbjct: 1255 QLLVITHDEDFVELL 1269
>gi|410914658|ref|XP_003970804.1| PREDICTED: DNA repair protein RAD50-like [Takifugu rubripes]
Length = 1312
Score = 395 bits (1015), Expect = e-106, Method: Compositional matrix adjust.
Identities = 351/1345 (26%), Positives = 655/1345 (48%), Gaps = 158/1345 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKN-RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D++ I+G+R+F DK+ +V+ F PLT++VG NG GKTTIIEC+++A + E P G
Sbjct: 1 MSRIDKMSILGVRSFGIEDKDIQVISFFSPLTVLVGPNGAGKTTIIECLRYATSGELPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDP+ + + A ++L + N + V + RS
Sbjct: 61 ---------------------SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K + + + I+R V + C + EM + +GVSK +LN+VIFC
Sbjct: 100 MSCTQKAKNYSFKSLEQVITRIKDGEKVSLSSKCGDMDR--EMISSLGVSKPVLNHVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +KE FD IF ATKY KALE+++ +LR + + Q L Y
Sbjct: 158 HQEESNWPLSEGKALKEKFDAIFAATKYIKALETMR----QLRHKQTQTVKECQVELRYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K Q I ++ S + + IE+ + P+ +L + K + + +
Sbjct: 214 KQNKEKAQQIRETVATKEAQLMASRDSVQQIEDRITPLENQLTDIDTKLGKVMKLDNDIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQERLKSQY 353
++ + +++ ELE +++Q+F G +LQ + + +K L +NQ+ L
Sbjct: 274 ALESRKKQMEQDNKELEETMEQVFQGSDEQLQDVYQNHQRTVKQKERRLADNQKEL---- 329
Query: 354 IQEEKQSHTHINEAQMKL----GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
++ + +N + L G+L + + H T T++ +L+ L L+ + +
Sbjct: 330 -EKAGRECQRLNRVKADLLVEQGRLRLEADRHMDNIMTRDTQVRSLSSYLGLEGYDRPPF 388
Query: 410 TPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQ 469
+ + + + +++ + + + E KQ I+ + +K LE ++ K+
Sbjct: 389 SDLQLDSFHRHVTERLEQEKETVSQVMAELQEKEQRKQQSIDDMRDKKTGLERTVE-LKR 447
Query: 470 QIEGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAW 528
++G K ++L ++ Q+ + S S LQ L+++L +V E+ +S + ++LKNE+
Sbjct: 448 DLQGKKQQELRDIRAQLQRLEGSSSRLQELESELAKVERELHSTIQSSNVEELKNEVGEL 507
Query: 529 IRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF 588
R++ +L+ +D E+ +L ++ L K K I +K RH L
Sbjct: 508 QREKTDLDHSQRRLDKEMEMLNTHTTARTQMDMLNREKMEKEDHIRKIKSRHSEDLVSLL 567
Query: 589 DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAE 648
P K L+ + S + +I ++ + K L + E N ++ + LR +++ L
Sbjct: 568 GHFPN---KIELEDWIYSKSKEITNTRDRLAKLNKDLASSEQNKNHIAAELRKKEQQLVN 624
Query: 649 LMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLC 707
+ V GS+ E +L ++ +L++ ++ +M+ ++ +I +L EE EP CP+C
Sbjct: 625 DEETFFNVCGSQDLEQDLSKLQEDLEKVSKQRAMLAGATAVYTQFISQLTEEREPCCPVC 684
Query: 708 TRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQD 767
R F S+ + +++ +++K++ +P++ N + + + +++ + L+PV I+ LQ+
Sbjct: 685 QRTFPSESELQEVISDMQSKLRLVPDKLRNTEQDLKKKERKRDDMVALRPVRLTIVHLQE 744
Query: 768 TDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT 827
++P LR++L + + + G++++ +T L T ++E+TA + D++L+++ + +L
Sbjct: 745 KELPELRNRLQTVNREIEKLNGDIEEQETLLRTLMSEEETAKACLQDISLMNRYLMDLKE 804
Query: 828 LQRELERQESKISGMRSTGVDLDQVLAQQKEKKNE----LNTFRSKIESGQTRLNSHNEK 883
++R++ + +++ GVDL + + Q ++K E L+T SK+E + + ++
Sbjct: 805 VERKIAQHAARLQ-----GVDLSRTIQQVSQEKQEIQHKLDTTSSKMELKRKLIQDQQDQ 859
Query: 884 LQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQL 943
+Q L+ N+ ++L + + LE++ E + TE++ L R + + QL
Sbjct: 860 IQMLKSAVNETREEKLQLSSNMQKCQQLEEQCVE-------FTTEIQSLTRDIREAKEQL 912
Query: 944 NLAQSELDALKKE------HKKKLNEEGA-KIQDYTKQLEEVKRIKLEILNYTKRG---- 992
+ L+ L++E HK++ EEG KI ++ + + ++ EI Y K G
Sbjct: 913 SPLSVALEKLQQEKQELLDHKRQRQEEGQEKINAIKERAKFLSALEGEISKYVKEGRDEY 972
Query: 993 ---TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLL 1049
+L + + + KE I + G I Q I Q ++E L++NLTL
Sbjct: 973 KEHKEFELQGTDSQLHEAEKHKEKISKEMGT-------IRQDIDTQKVQERWLQDNLTLR 1025
Query: 1050 EK----KEAVAK---------------LNEELKLSEIMISDLTK-------YHHTLENCV 1083
++ KE ++K L +E + +E + DL K E +
Sbjct: 1026 KRVEELKEVISKRDVLLKDMGNMQVLQLRQERREAENKLEDLKKNRSIALGRQKGFEEEI 1085
Query: 1084 IKYHSQ-KMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
+ Y + + ++ Y ++ L+ +E++I DL Y+ L+ ++K+HS KM IN+
Sbjct: 1086 LHYRKELREDQYDKADEHYKNKMITLRTTELVIKDLDLYYKALDQTIMKFHSMKMDEINK 1145
Query: 1143 LIREYWTRIYQGNDIDYISIAADVGTGSE---KRRTYNYRVVQKKNGIEQDMRNRCSAGQ 1199
++R+ W Y+G DI YI I +DV S KRR YNYRVV K DMR RCSAGQ
Sbjct: 1146 IVRDLWRSTYRGQDIQYIEIRSDVDDSSSAGVKRRVYNYRVVMVKGDTALDMRGRCSAGQ 1205
Query: 1200 RVLACLIIRLFISD---------------------------------------QKNFQLI 1220
+VLA LIIRL +++ Q+NFQL+
Sbjct: 1206 KVLASLIIRLALAETFCLNCGILALDEPTTNLDRDNIESLAHALVEIIRSRSRQRNFQLL 1265
Query: 1221 VITHDEEFIENL---TAIDRAYVVR 1242
VITHDE+F+E L + I+ Y +R
Sbjct: 1266 VITHDEDFVELLGRSSYIEHFYRIR 1290
>gi|345326936|ref|XP_001508900.2| PREDICTED: DNA repair protein RAD50 [Ornithorhynchus anatinus]
Length = 1279
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 337/1264 (26%), Positives = 637/1264 (50%), Gaps = 120/1264 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSILGVRSFGIEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAHETDVRAQIRLQFRDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ S K K T + I+R V + C + + EM + GVSK++LNNVIFC
Sbjct: 100 MVCSQKGKKTEFKTLEGVITRSKHGDKVSISSKCTEIDQ--EMISSFGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R + E Q L Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQSGRVKEC----QTELKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNI----EESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K I + ++ +I E + P+ +L ++ + + + + +
Sbjct: 214 KQNKEKACEIQDQIASKEAQLTSSKDIVKTYENDLDPLKNRLKEIEQNLSKILKLDNEIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ + +++ +EL+ ++++F G +L + + + EK L + +R +
Sbjct: 274 ALESRKKQMEKDNSELKQKMEKVFQGTDDQLNDLYHNHQRTVREKERRLIDCQRELDRVN 333
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+E + + +E ++ G+L+ + H++ + + +LA L LD ++ +T +
Sbjct: 334 KESRMLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGYERAPFTERQI 393
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSD---NENTKQAEINALIVEKVELESKIKSFKQQI 471
K+ + ++ D K + +D E KQ +I + +K LE ++ K +I
Sbjct: 394 NSFHKLVK---ERQERDAKTTNQVMNDLIGKETMKQKQIEEIRDKKTGLE-RVIELKAEI 449
Query: 472 EGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
+ K+ +L NV ++ ++ S + L +L + E+ + K+ + LK E+
Sbjct: 450 QSKKQTELKNVKYELQQLEGSSDRILELDRELGKAERELGKAEKNSTVEALKVEVSDLQG 509
Query: 531 QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDM 590
+R +L+ L +D E+ L T +++ L K K I +K RH L
Sbjct: 510 ERVDLDRVLRKLDQEMEQLNMHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTTLMGY 569
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
P K L+ L T +IN+ ++ + K L + E N ++ S LR ++ L
Sbjct: 570 FPN---KKQLEDWLHCKTKEINQTRDKLAQFNKELVSAEQNKNHISSELRQKEEQLNSYE 626
Query: 651 DRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTR 709
+R+ V GS+ FE +L ++ E+++ ++ +M+ +++ +I +L +E + CP+C R
Sbjct: 627 ERLFDVCGSQDFESDLVKLKEEIEKSAKQRAMLAGATAVYSQFITQLKDEKQSCCPVCQR 686
Query: 710 FFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTD 769
F+++ + +++ L++K++ P++ + ++ + + K++ + LKP+ ++I++L++ +
Sbjct: 687 VFQTEAELRDVISDLESKLRLAPDKLKSTESDLKRKEKRRDDMVGLKPIRQHIVELKEKE 746
Query: 770 IPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQ 829
IP LR+KL L ++ K ++++ +T L T +E++A + D+T++++ EL ++
Sbjct: 747 IPELRNKLQTLNRDIQRLKCDVEEQETVLCTVMPEEESAKACLTDITIMERVQMELRDVE 806
Query: 830 RELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQ 885
R++ +Q +K+ GVDLD QV +++EK+++L+T SK+E + + E++Q
Sbjct: 807 RKIAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHKLDTVSSKMELNRKLIQDQQEQIQ 861
Query: 886 SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNL 945
L+ ND+ S++L + + LE++ EL TE++ L R++ + QL
Sbjct: 862 GLKSTVNDLKSEKLQISSNLQRRQQLEEQTVEL-------STEVQSLHREIKDAKEQLFP 914
Query: 946 AQSELDALKKEH-----KKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRGTLTQLA 998
++ LD L++E KK N + A K+ D ++++ + I +Y + G
Sbjct: 915 LEATLDKLRQEKEELIDKKNTNSKIAQDKLNDIQEKIKNIHSHVKNIEDYIQDGK----- 969
Query: 999 ALRESVQKLNQRKEDIIAKRGV----CERTINEIN-------QSIANQSLEEIDLKNNLT 1047
+ Q+KE + K CE+ +IN Q I Q ++E L++NLT
Sbjct: 970 ------ENYKQQKESELNKVATQINECEKQKEKINNEMGTMRQDIDTQKIQERWLQDNLT 1023
Query: 1048 LLEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQ 1089
L ++ E + ++ EE K + ++ + L H LE + K + +
Sbjct: 1024 LRKRNEELKEVEEERKQLSKEMGQMQVLQLKTEHQKLEEKIETLKRNLSVALGRQKGYEE 1083
Query: 1090 KMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSI 1140
++ + +R+ R + K E+MI DL Y+ TL+ ++K+HS KM I
Sbjct: 1084 EIIHFKKELRDPQFRDAEEKHREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEI 1143
Query: 1141 NRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSA 1197
N++IR+ W Y+G DI+YI I +D + S+KRR+YNYRVV K DMR RCSA
Sbjct: 1144 NKIIRDLWRTTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGRCSA 1203
Query: 1198 GQRV 1201
GQ++
Sbjct: 1204 GQKI 1207
>gi|417413722|gb|JAA53175.1| Putative dna repair protein rad50 abc-type atpase/smc superfamily,
partial [Desmodus rotundus]
Length = 1269
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 333/1278 (26%), Positives = 642/1278 (50%), Gaps = 131/1278 (10%)
Query: 42 TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIV 101
TIIEC+K+ T ++P G + G FVHDP++ ++ + A +
Sbjct: 1 TIIECLKYICTGDFPPG---------------------TKGNTFVHDPKVAQETDVRAQI 39
Query: 102 KLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEM 161
+LQ N + V V RS+L + K K T + I+R V + C + + EM
Sbjct: 40 RLQFRDVNGELVAVQRSMLCTQKGKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EM 97
Query: 162 CNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLR 221
+ +GVSK++LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 98 ISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQG 157
Query: 222 KEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTE 281
+++ E + + K+EA + I + + S E + + E + P+ +L ++ +
Sbjct: 158 QKVRECQTELKYLKQNKEEACEIRDQITSKEAQLTSSKEIVRSYESELDPLKNRLREIEQ 217
Query: 282 KERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCS 341
+ + + + ++ + +++ +ELE ++++F G +L + + + EK
Sbjct: 218 NLSKIMKLDNEIKALESRKTQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKER 277
Query: 342 ELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCL 401
L + +R+ + +E + + +E ++ G+L+ + H++ + + +LA L L
Sbjct: 278 RLIDCQRVLEKLNKESRLLNQEKSELLVEQGRLQLQADRHQENIRARDSLIQSLATQLEL 337
Query: 402 DTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELE 461
D + ++ + + ++ + +K L F++ E KQ +I+ + +K+ L
Sbjct: 338 DGFERGPFSERQIKNFHRLVRERQEKEEETASQLMSDFAEKETLKQRQIDEIRDKKIGL- 396
Query: 462 SKIKSFKQQIEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQ 520
+I K +I K+ +L NV ++ ++ S + L +L + E+++ K+ + +
Sbjct: 397 GRIIELKSEILSKKQSELKNVKCELQQLEGSSDRILELDRELTKAEHELNKAEKNSNVEA 456
Query: 521 LKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH 580
LK E+ + ++ +L+ + +D E+ L T A+++ L K K I +K RH
Sbjct: 457 LKTEVTSLQNEKADLDRIVRKLDQEMEQLNHHTTTRAQLEMLTKDKADKDEQIRKIKSRH 516
Query: 581 DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLR 640
+ L P K L+ L S + +IN+ ++ + K L + E N ++ + L+
Sbjct: 517 SDELNSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELK 573
Query: 641 DQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EE 699
++ L+ D++ V GS+ F+ +LDR+ E+++ ++ +M+ +++ +I +L +E
Sbjct: 574 RKEEQLSNYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDE 633
Query: 700 NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
N+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ + L P+
Sbjct: 634 NQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMR 693
Query: 760 ENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLD 819
+ I+ L++ +IP LR+KL + ++ K ++++ +T L +E++A D+T+++
Sbjct: 694 QGIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIMPEEESAKVCLTDVTIME 753
Query: 820 QNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQT 875
+ EL ++R++ +Q +K+ GVDLD QV +++EK+++L+T SKIE +
Sbjct: 754 RFQMELKDVERKIAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRK 808
Query: 876 RLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGR 934
+ E++Q L+ N++ S++L + + LE++ EL + S+Y+ E+++
Sbjct: 809 FIQDQQEQIQHLRSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKE 867
Query: 935 KVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG 992
+++P+ET L+ Q E + L KK K+ ++ KI D ++++ + I NY + G
Sbjct: 868 QISPLETTLDKFQQEKEELICKKNTSIKIIQD--KISDIKEKVKNIHGYMKNIENYIQDG 925
Query: 993 -------TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN 1045
T+L + + + + E I + G + Q I Q ++E L++N
Sbjct: 926 KDDYKKQKETELNKVIAQLSESEKHHEKIHKEMGT-------MRQDIDTQKIQERWLQDN 978
Query: 1046 LTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTL------ 1079
LTL + + + + NE L E + D K +H+L
Sbjct: 979 LTLRKRNEELKEVEEERKRHLKEMGQMQVLQMKNEHQNLEEKI--DNIKRNHSLAIGRQK 1036
Query: 1080 --ENCVIKYHSQKMRSINRLIRE-YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
E+ +I + + + R E Y + ++ +E++ DL Y+ TL+ ++K+HS K
Sbjct: 1037 GYEDEIIHFKKELQKPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMK 1096
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRN 1193
M IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR
Sbjct: 1097 MEEINKIIRDLWRSTYRGQDIEYIEIRSDADENLSASDKRRNYNYRVVMLKGDTALDMRG 1156
Query: 1194 RCSAGQRVLACLIIRLFI---------------------------------------SDQ 1214
RCSAGQ+VLA LIIRL + S Q
Sbjct: 1157 RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLALALVEIIKSRSQQ 1216
Query: 1215 KNFQLIVITHDEEFIENL 1232
+NFQL+VITHDE+F+E L
Sbjct: 1217 RNFQLLVITHDEDFVELL 1234
>gi|355691588|gb|EHH26773.1| hypothetical protein EGK_16836 [Macaca mulatta]
Length = 1295
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 358/1370 (26%), Positives = 685/1370 (50%), Gaps = 150/1370 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKT + C +P
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTFFL-C--------FP-- 49
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
++ ++ + A ++LQ N + + V RS
Sbjct: 50 ------------------------------SKVAQETDVRAQIRLQFRDVNGELIAVQRS 79
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 80 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 137
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 138 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 197
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 198 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 257
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 258 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 317
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 318 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 377
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK-D 477
K+ + ++ + K + + E KQ +I+ + +K L +I K +I K+ +
Sbjct: 378 KLVK---ERQEGEAKTANQLMAKKETLKQKQIDEIRDKKTGL-GRIIELKSEILNKKQNE 433
Query: 478 LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELED 537
L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++ +L+
Sbjct: 434 LKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEKADLDR 493
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
L +D E+ L T +++ L K K I +K RH L P K
Sbjct: 494 TLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---K 550
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D++ V
Sbjct: 551 KQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQLSSYEDKLFDVC 610
Query: 658 GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYS 716
GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++
Sbjct: 611 GSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE 670
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+ +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP LR+K
Sbjct: 671 LQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNK 730
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
L + ++ K ++++ +T L T +E++A D+T++++ EL ++R++ +Q
Sbjct: 731 LQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA 790
Query: 837 SKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L+ N
Sbjct: 791 AKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSITN 845
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELD 951
++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L Q E +
Sbjct: 846 ELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKE 904
Query: 952 AL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+ KK K+ ++ K+ D ++++ + +I NY + G +E+ +LN+
Sbjct: 905 EIINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET--ELNK 959
Query: 1010 RKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL-------------- 1048
+IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 960 ----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEER 1015
Query: 1049 ------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1102
+ + + + NE KL E + D K +H+L K + +++ + +RE
Sbjct: 1016 KQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHSLALGRQKGYEEEIIHFKKELREPQ 1073
Query: 1103 TRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+
Sbjct: 1074 FRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYR 1133
Query: 1154 GNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQR------VLAC 1204
G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+ VLA
Sbjct: 1134 GQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKAGAFFQVLAS 1193
Query: 1205 LIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALD 1264
LIIRL +++ +I DE T +DR + + AL E
Sbjct: 1194 LIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI----------- 1235
Query: 1265 EPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1236 -------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1276
>gi|47219261|emb|CAG11723.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1335
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 352/1385 (25%), Positives = 670/1385 (48%), Gaps = 151/1385 (10%)
Query: 1 MALLDQLHIMGIRNFP-ADKN-RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK+ +V+ F PLT++VG NG GKTTIIEC+++A + E P G
Sbjct: 1 MSKIEKMSILGVRSFGIEDKDMQVISFFSPLTVLVGPNGAGKTTIIECLRYATSGELPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDP+ + + A ++L + N + V + RS
Sbjct: 61 ---------------------SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGERVTIHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K + + + I+R V + C + EM + +GVSK +LN+VIFC
Sbjct: 100 MSCTQKAKNYSFKSLEQVITRIKDGEKVSLSSKCADMDR--EMISSLGVSKPVLNHVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +KE FD IF ATKY KAL++++ R + + E Q L Y
Sbjct: 158 HQEESNWPLSEGKALKEKFDAIFAATKYIKALDTMRQLRLKQALAVKEC----QMELGYL 213
Query: 239 KEADSKKQLIYNNTQKRD----QSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K K Q I ++ S + IE ++P+ ++L + K + + +
Sbjct: 214 KLNKEKAQQIREAVATKEAQLMASRNSVQQIENQIQPLEDRLTDIDIKLSKVMKLDNDIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ + ++E ELE +++Q+F G +LQ + + + EK L + ++ +
Sbjct: 274 ALESRKKQMEEDNKELEETMEQVFQGSDEQLQDNYHNHQRTVREKERRLTDCQK----EL 329
Query: 355 QEEKQSHTHINEAQMKL----GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
++ + +N + L G+L+ + + H T ++ +L+ L L+ ++ ++
Sbjct: 330 EKAGRECQRLNRVKADLLVEQGRLQLEADRHAHNIRTRDAQVRSLSSYLDLEGYDRTPFS 389
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
+ + + +++ + + E KQ I+ + +K LE ++ K+
Sbjct: 390 ALQLQSFHRHVTERLEQERQTLAGAMAELQEKEQQKQQAIDDMRDKKTGLERTVE-LKRD 448
Query: 471 IEGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
++G K ++L N+ ++ + S S LQ L+++L + E+ + + ++LKNE+
Sbjct: 449 LQGKKQQELRNIRAELQGLEGSSSRLQELESELAKAERELQSAVQGSNVEELKNEVVELQ 508
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFD 589
R++ +L+ +D E+ L ++ LK K K + +K RH L
Sbjct: 509 REKADLDRSQRQLDKEMETLNTHTTARTQMDMLKREKTEKEDQVRKIKSRHSEDLVSLLG 568
Query: 590 MIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAEL 649
P K L+ + S + +I+ ++ + K+L + E N ++++ LR +++ LA
Sbjct: 569 HFPN---KRELEDWIYSKSKEISATRDRLAKLNKNLASSEQNKNHTAAELRKKEQQLASD 625
Query: 650 MDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCT 708
+ V G++ E +L ++ +L++ + +M+ ++ +I +L EE EP CP+C
Sbjct: 626 EETFFNVCGNQDLEQDLSKLQEDLEKVSRQRAMLAGATAVYTQFISQLTEEREPCCPVCQ 685
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT 768
R F + + +++ +++K++ +P++ N + + + +++ + L+PV + I++LQ+
Sbjct: 686 RTFPMESELQEVISGMQSKLRLVPDKLRNTEQDLKRKERKRDDMVALRPVRQTIVQLQEK 745
Query: 769 DIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTL 828
++P LR++L + + + K E+++ ++ L ++E+TA + D++L+D+ + +L +
Sbjct: 746 ELPELRNRLQTVNREIEKLKSEVEEQESLLVILMSEEETAKACLQDISLMDRYLMDLKEV 805
Query: 829 QRELERQESKISGMRSTGVDLDQVLAQQKEKKNE----LNTFRSKIESGQTRLNSHNEKL 884
+R++ + +K+ GVDL + + Q ++K E L+T SK+E + + +++
Sbjct: 806 ERKIAQHSAKLQ-----GVDLSRTVQQVSQEKQEIQHRLDTTSSKMELKRKLIQDQQDQI 860
Query: 885 QSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLN 944
Q L+ N+ ++L + + LED+ E + TE++ L R + + QL+
Sbjct: 861 QLLKSAVNETREEKLQLSSNMQKRQQLEDQCVE-------FTTEIQSLTRDIREAKEQLS 913
Query: 945 LAQSELDALKKE------HKKKLNEEGA-KIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
L+ L++E K++ EEG KI ++ + V ++ EI Y + G
Sbjct: 914 PLSVALERLQQEKQELLDRKRQRQEEGQEKINAINEKAKAVSALEREISKYVEEGKDEYK 973
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEK----KE 1053
+Q+ N + + + + + I Q I Q ++E L++NLTL ++ KE
Sbjct: 974 EQKESELQETNSQLHEAEKHKEKVSKEMGTIRQDIDTQKVQERWLQDNLTLRKRVEELKE 1033
Query: 1054 AVAK---------------LNEELKLSEIMISDLTK-------YHHTLENCVIKYHSQ-K 1090
V+K L +E + E + +L K E ++ Y + +
Sbjct: 1034 VVSKRDALRKEMGNMQVLQLRQERREVERQLEELKKNRSIAVGRQKGFEEEILHYRKELR 1093
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+ + ++ L+ +E++I DL Y+ L+ ++K+HS KM IN+++R+ W
Sbjct: 1094 EDQYEKADERHKNKMITLRTTELVIKDLDLYYKALDQTIMKFHSMKMDEINKIVRDLWRS 1153
Query: 1151 IYQGN-----------------------DIDYISIAADV---GTGSEKRRTYNYRVVQKK 1184
Y+G DI+YI I +D+ + KRRTYNYRVV K
Sbjct: 1154 TYRGQGAALRQVTPARLLWTRLMALLPPDIEYIEIRSDLDDNASAGVKRRTYNYRVVMVK 1213
Query: 1185 NGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIV 1244
DMR RCSAGQ+VLA LIIRL +++ ++ D E T +DR +V +
Sbjct: 1214 GDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALD----EPTTNLDRDNIVSLA 1269
Query: 1245 RDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENL---TAIDR 1301
AL E IK+ S Q+NFQL+VITHDE+F+E L + I+
Sbjct: 1270 H---ALVEI------------------IKSRSRQRNFQLLVITHDEDFVELLGRSSYIEH 1308
Query: 1302 AYVVR 1306
Y +R
Sbjct: 1309 FYRIR 1313
>gi|395736146|ref|XP_003776708.1| PREDICTED: DNA repair protein RAD50 isoform 3 [Pongo abelii]
Length = 1173
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 327/1207 (27%), Positives = 616/1207 (51%), Gaps = 106/1207 (8%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSKA+LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + YK++A + I + + S E + + E + P+ +L ++
Sbjct: 61 GQKVKEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 HNLSKIMKLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+L + R + +E + + +E ++ G+L+ + H++ + + +LA L
Sbjct: 181 RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK--- 457
LD + ++ + + K+ + + L F++ E KQ +I+ + +K
Sbjct: 241 LDGFERGPFSERQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL 300
Query: 458 ---VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
+EL+S+I S KQ +L NV ++ ++ S + L +L + E+ + K
Sbjct: 301 GRIIELKSEILSKKQ------NELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEK 354
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+ + + LK E+ + ++ +L+ L +D E+ L T +++ L K K I
Sbjct: 355 NSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIR 414
Query: 575 LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+K RH L P K L+ L S + +IN+ ++ + K L + E N ++
Sbjct: 415 KIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNH 471
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI 694
+ L+ ++ L+ D++ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I
Sbjct: 472 INNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFI 531
Query: 695 GKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ 753
+L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ +
Sbjct: 532 TQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEML 591
Query: 754 ELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQG 813
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A
Sbjct: 592 GLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 651
Query: 814 DLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSK 869
D+T++++ EL ++R++ +Q +K+ G+DLD QV +++EK+++L+T SK
Sbjct: 652 DVTMMERFQMELKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSK 706
Query: 870 IESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTE 928
IE + + E++Q L+ N++ S++L + + LE++ EL + S+Y+ E
Sbjct: 707 IELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-E 765
Query: 929 LEELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEIL 986
+++ +V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +I
Sbjct: 766 IKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIE 823
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEE 1039
NY + G +E+ +LN+ +IA+ CE+ +IN Q I Q ++E
Sbjct: 824 NYIQDGK-DDYKKQKET--ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQE 876
Query: 1040 IDLKNNLTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTL 1079
L++NLTL + + + + NE KL E + D K +H L
Sbjct: 877 RWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHNL 934
Query: 1080 ENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVI 1130
K + +++ + +RE R + K E+MI DL Y+ TL+ ++
Sbjct: 935 ALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIM 994
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGI 1187
K+HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 995 KFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDT 1054
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDH 1247
DMR RCSAGQ+VLA LIIRL +++ +I DE T +DR + +
Sbjct: 1055 ALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH-- 1108
Query: 1248 KALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRI 1307
AL E IK+ S Q+NFQL+VITHDE+F+E L + YV +
Sbjct: 1109 -ALVEI------------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKF 1147
Query: 1308 VRDHKGL 1314
R K +
Sbjct: 1148 YRIKKNI 1154
>gi|332821874|ref|XP_003310856.1| PREDICTED: DNA repair protein RAD50 [Pan troglodytes]
gi|397518343|ref|XP_003829351.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Pan paniscus]
Length = 1173
Score = 349 bits (895), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 325/1205 (26%), Positives = 620/1205 (51%), Gaps = 102/1205 (8%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSKA+LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + YK++A + I + + S E + + E + P+ +L ++
Sbjct: 61 GQKVKEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 HNLSKIMKLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+L + R + +E + + +E ++ G+L+ + H++ + + +LA L
Sbjct: 181 RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK--- 457
LD + ++ + + K+ + + L F++ E KQ +I+ + +K
Sbjct: 241 LDGFERGPFSERQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL 300
Query: 458 ---VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
+EL+S+I S KQ +L NV ++ ++ S + L +L + E+ + K
Sbjct: 301 GRIIELKSEILSKKQN------ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEK 354
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+ + + LK E+ + ++ +L+ L +D E+ L T +++ L K K I
Sbjct: 355 NSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIR 414
Query: 575 LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+K RH L P K L+ L S + +IN+ ++ + K L + E N ++
Sbjct: 415 KIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNH 471
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI 694
+ L+ ++ L+ D++ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I
Sbjct: 472 INNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFI 531
Query: 695 GKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ 753
+L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ +
Sbjct: 532 TQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEML 591
Query: 754 ELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQG 813
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A
Sbjct: 592 GLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 651
Query: 814 DLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSK 869
D+T++++ EL ++R++ +Q +K+ G+DLD QV +++EK+++L+T SK
Sbjct: 652 DVTIMERFQMELKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSK 706
Query: 870 IESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTE 928
IE + + E++Q L+ N++ S++L + + LE++ EL + S+Y+ E
Sbjct: 707 IELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-E 765
Query: 929 LEELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEIL 986
+++ +V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +I
Sbjct: 766 IKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIE 823
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEE 1039
NY + G +E+ +LN+ +IA+ CE+ +IN Q I Q ++E
Sbjct: 824 NYIQDGK-DDYKKQKET--ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQE 876
Query: 1040 IDLKNNLTLLEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLENCV----------- 1083
L++NLTL ++ E + ++ EE K + ++ + + H LE +
Sbjct: 877 RWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLAL 936
Query: 1084 --IKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKY 1132
K + +++ + +RE R + K E+MI DL Y+ TL+ ++K+
Sbjct: 937 GRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 996
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQ 1189
HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR+YNYRVV K
Sbjct: 997 HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMLKGDTAL 1056
Query: 1190 DMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKA 1249
DMR RCSAGQ+VLA LIIRL +++ +I DE T +DR + + A
Sbjct: 1057 DMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---A 1109
Query: 1250 LAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVR 1309
L E IK+ S Q+NFQL+VITHDE+F+E L + YV + R
Sbjct: 1110 LVEI------------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYR 1149
Query: 1310 DHKGL 1314
K +
Sbjct: 1150 IKKNI 1154
>gi|426349899|ref|XP_004042522.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Gorilla gorilla
gorilla]
Length = 1173
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 325/1205 (26%), Positives = 619/1205 (51%), Gaps = 102/1205 (8%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSKA+LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + YK++A + I + + S E + + E + P+ +L ++
Sbjct: 61 GQKVKEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 HNLSKIMKLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+L + R + +E + + +E ++ G+L+ + H++ + + +LA L
Sbjct: 181 RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK--- 457
LD + ++ + + K+ + + L F++ E KQ +I+ + +K
Sbjct: 241 LDGFERGPFSERQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL 300
Query: 458 ---VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
+EL+S+I S KQ +L NV ++ ++ S + L +L + E+ + K
Sbjct: 301 GRIIELKSEILSKKQ------SELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEK 354
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+ + + LK E+ + ++ +L+ L +D E+ L T +++ L K K I
Sbjct: 355 NSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIR 414
Query: 575 LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+K RH L P K L+ L S + +IN+ ++ + K L + E N ++
Sbjct: 415 KIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNH 471
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI 694
+ L+ ++ L+ D++ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I
Sbjct: 472 INNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFI 531
Query: 695 GKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ 753
+L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ +
Sbjct: 532 TQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEML 591
Query: 754 ELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQG 813
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A
Sbjct: 592 GLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 651
Query: 814 DLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSK 869
D+T++++ EL ++R++ +Q +K+ G+DLD QV +++EK+++L+T SK
Sbjct: 652 DVTIMERFQMELKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSK 706
Query: 870 IESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTE 928
IE + + E++Q L+ N++ S++L + + LE++ EL + S+Y+ E
Sbjct: 707 IELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-E 765
Query: 929 LEELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEIL 986
+++ +V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +I
Sbjct: 766 IKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIE 823
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEE 1039
NY + G +E+ +LN+ +IA+ CE+ +IN Q I Q ++E
Sbjct: 824 NYIQDGK-DDYKKQKET--ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQE 876
Query: 1040 IDLKNNLTLLEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLENCV----------- 1083
L++NLTL ++ E + ++ EE K + ++ + + H LE +
Sbjct: 877 RWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLAL 936
Query: 1084 --IKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKY 1132
K + +++ + +RE R + K E+MI DL Y+ TL+ ++K+
Sbjct: 937 GRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 996
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQ 1189
HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 997 HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTAL 1056
Query: 1190 DMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKA 1249
DMR RCSAGQ+VLA LIIRL +++ +I DE T +DR + + A
Sbjct: 1057 DMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---A 1109
Query: 1250 LAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVR 1309
L E IK+ S Q+NFQL+VITHDE+F+E L + YV + R
Sbjct: 1110 LVEI------------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYR 1149
Query: 1310 DHKGL 1314
K +
Sbjct: 1150 IKKNI 1154
>gi|5739043|gb|AAD50326.1|AF057300_1 truncated RAD50 protein [Homo sapiens]
gi|119582734|gb|EAW62330.1| RAD50 homolog (S. cerevisiae), isoform CRA_c [Homo sapiens]
Length = 1173
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 325/1205 (26%), Positives = 619/1205 (51%), Gaps = 102/1205 (8%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSKA+LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + YK++A + I + + S E + + E + P+ +L ++
Sbjct: 61 GQKVKEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 HNLSKIMKLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+L + R + +E + + +E ++ G+L+ + H++ + + +LA L
Sbjct: 181 RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK--- 457
LD + ++ + + K+ + + L F++ E KQ +I+ + +K
Sbjct: 241 LDGFERGPFSERQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL 300
Query: 458 ---VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
+EL+S+I S KQ +L NV ++ ++ S + L +L + E+ + K
Sbjct: 301 GRIIELKSEILSKKQN------ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEK 354
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+ + + LK E+ + ++ +L+ L +D E+ L T +++ L K K I
Sbjct: 355 NSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIR 414
Query: 575 LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+K RH L P K L+ L S + +IN+ ++ + K L + E N ++
Sbjct: 415 KIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNH 471
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI 694
+ L+ ++ L+ D++ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I
Sbjct: 472 INNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFI 531
Query: 695 GKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ 753
+L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ +
Sbjct: 532 TQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEML 591
Query: 754 ELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQG 813
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A
Sbjct: 592 GLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 651
Query: 814 DLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSK 869
D+T++++ EL ++R++ +Q +K+ G+DLD QV +++EK+++L+T SK
Sbjct: 652 DVTIMERFQMELKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSK 706
Query: 870 IESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTE 928
IE + + E++Q L+ N++ S++L + + LE++ EL + S+Y+ E
Sbjct: 707 IELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-E 765
Query: 929 LEELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEIL 986
+++ +V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +I
Sbjct: 766 IKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIE 823
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEE 1039
NY + G +E+ +LN+ +IA+ CE+ +IN Q I Q ++E
Sbjct: 824 NYIQDGK-DDYKKQKET--ELNK----VIAQLSECEKHKEKINEDMRLMRQDIDTQKIQE 876
Query: 1040 IDLKNNLTLLEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLENCV----------- 1083
L++NLTL ++ E + ++ EE K + ++ + + H LE +
Sbjct: 877 RWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLAL 936
Query: 1084 --IKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKY 1132
K + +++ + +RE R + K E+MI DL Y+ TL+ ++K+
Sbjct: 937 GRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKF 996
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQ 1189
HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 997 HSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTAL 1056
Query: 1190 DMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKA 1249
DMR RCSAGQ+VLA LIIRL +++ +I DE T +DR + + A
Sbjct: 1057 DMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---A 1109
Query: 1250 LAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVR 1309
L E IK+ S Q+NFQL+VITHDE+F+E L + YV + R
Sbjct: 1110 LVEI------------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYR 1149
Query: 1310 DHKGL 1314
K +
Sbjct: 1150 IKKNI 1154
>gi|332221678|ref|XP_003259990.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Nomascus leucogenys]
Length = 1174
Score = 345 bits (886), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 327/1208 (27%), Positives = 616/1208 (50%), Gaps = 107/1208 (8%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSKA+LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + YK++A + I + + S E + + E ++P+ +L ++
Sbjct: 61 GQKVKEYQMELKYLKQYKEKACEIRDQITSKEAQLTSSKEIVKSYENELEPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 HNLSKIMRLDNEIKALDSRKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+L + R + +E + + +E ++ G+L+ + H++ T + + +LA L
Sbjct: 181 RKLVDCHRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRTRDSLIQSLATQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK--- 457
LD + ++ + + K+ + + L F++ E KQ +I+ + +K
Sbjct: 241 LDGFERGPFSERQIKNFHKLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGL 300
Query: 458 ---VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
+EL+S+I S KQ +L NV ++ ++ S + L +L + E+ + K
Sbjct: 301 GRIIELKSEILSKKQ------NELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEK 354
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+ + + LK E+ + ++ +L+ L +D E+ L T +++ L K K I
Sbjct: 355 NSNVETLKMEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIR 414
Query: 575 LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+K RH L P K L+ L S + +IN+ ++ + K L + E N ++
Sbjct: 415 KIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNH 471
Query: 635 SSKTLRDQKRTLAELMDRMELVLGS-KPFEDELDRVTLELKREQEEVSMMTSTQYLFNSY 693
+ L+ ++ L+ D++ V G FE +LDR+ E+++ ++ +M+ +++ +
Sbjct: 472 INNELKRKEEQLSSYEDKLFDVCGEFHHFESDLDRLKEEIEKSSKQRAMLAGATAVYSQF 531
Query: 694 IGKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
I +L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ +
Sbjct: 532 ITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEM 591
Query: 753 QELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQ 812
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A
Sbjct: 592 LGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 651
Query: 813 GDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRS 868
D+T++++ EL ++R++ +Q +K+ G+DLD QV +++EK+++L+T S
Sbjct: 652 TDVTIMERFQMELKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSS 706
Query: 869 KIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQT 927
KIE + + E++Q L+ N++ S++L + + LE++ EL + S+Y+
Sbjct: 707 KIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR- 765
Query: 928 ELEELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEI 985
E+++ +V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +I
Sbjct: 766 EIKDAKEQVSPLETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDI 823
Query: 986 LNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLE 1038
NY + G +E+ +LN+ +IA+ CE+ +IN Q I Q ++
Sbjct: 824 ENYIQDGK-DDYKKQKET--ELNK----VIAQLSECEKHKEKINEDRRIMRQDIDTQKIQ 876
Query: 1039 EIDLKNNLTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHT 1078
E L++NLTL + + + + NE KL E + D K +H
Sbjct: 877 ERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHN 934
Query: 1079 LENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCV 1129
L K + +++ + +RE R + K E+MI DL Y+ TL+ +
Sbjct: 935 LALGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAI 994
Query: 1130 IKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNG 1186
+K+HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 995 MKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGD 1054
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRD 1246
DMR RCSAGQ+VLA LIIRL +++ +I DE T +DR + +
Sbjct: 1055 TALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH- 1109
Query: 1247 HKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVR 1306
AL E IK+ S Q+NFQL+VITHDE+F+E L + YV +
Sbjct: 1110 --ALVEI------------------IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEK 1147
Query: 1307 IVRDHKGL 1314
R K +
Sbjct: 1148 FYRIKKNI 1155
>gi|410948148|ref|XP_003980803.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Felis catus]
Length = 1173
Score = 335 bits (860), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 302/1164 (25%), Positives = 590/1164 (50%), Gaps = 118/1164 (10%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSK++LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + K++A + I + + S E + + E + P+ +L ++
Sbjct: 61 GQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEIVKSYENELDPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 QNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
L + +R + +E + + +E ++ G+L+ + H++ + + +LA L
Sbjct: 181 RRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK--- 457
LD + ++ + K+ + +K + F++ E KQ +I+ + +K
Sbjct: 241 LDGFERGPFSERHIKNFHKLVRERQEKETEIANQMMNDFAEKETMKQKQIDEIRDKKTGL 300
Query: 458 ---VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSK 514
+EL+S+I S KQ +L NV ++ ++ S + L +L++ E+ + K
Sbjct: 301 GRIIELKSEILSKKQ------NELRNVKYELQQLEGSSDRILELDQELSKAERELSKAEK 354
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
+ + + LK E+ + ++ +L+ L +D E+ + T +++ L K K I
Sbjct: 355 NSNVEALKIEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKSDKDEQIR 414
Query: 575 LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+K RH L P K L+ L S + +IN+ ++ + K L + E N ++
Sbjct: 415 KIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNH 471
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI 694
+ L+ ++ L+ D++ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I
Sbjct: 472 LNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFI 531
Query: 695 GKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ 753
+L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ +
Sbjct: 532 TQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEML 591
Query: 754 ELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQG 813
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A
Sbjct: 592 GLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLT 651
Query: 814 DLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESG 873
D+T++++ EL ++R++ +Q +K+ G+ G + QV +++EK+++L+T SKIE
Sbjct: 652 DVTIMERFQMELKDVERKIAQQAAKLQGL-DLGRTVQQVNQEKQEKQHKLDTVSSKIELN 710
Query: 874 QTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELG 933
+ + E++Q L+ N++ S++L + + LE++ EL TE++ L
Sbjct: 711 RKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVEL-------STEVQSLF 763
Query: 934 RKVAPIETQLNLAQSELDALKKEHKKKLNEEGA-------KIQDYTKQLEEVKRIKLEIL 986
R++ + QL+ ++ L+ ++E ++ +N++ A K+ D ++++ + +I
Sbjct: 764 REIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKMNDIKEKVKNIHGYMKDIE 823
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEE 1039
NY + G + ++ +LN+ +IA+ CE+ IN Q I Q ++E
Sbjct: 824 NYIQDG---KDDYKKQKENELNK----VIAQLSECEKHKENINKEMGIMRQDIDTQKIQE 876
Query: 1040 IDLKNNLTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTL 1079
L++NLTL + + + + N+ KL E + D K +H+L
Sbjct: 877 RWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKI--DNIKRNHSL 934
Query: 1080 ENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVI 1130
K + +++ R +RE R + K E+MI DL Y+ TL+ ++
Sbjct: 935 AIGRQKGYEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIM 994
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGI 1187
K+HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 995 KFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDT 1054
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFI------------------------------------ 1211
DMR RCSAGQ+VLA LIIRL +
Sbjct: 1055 ALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEII 1114
Query: 1212 ---SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL+VITHDE+F+E L
Sbjct: 1115 KSRSQQRNFQLLVITHDEDFVELL 1138
>gi|395817604|ref|XP_003782256.1| PREDICTED: DNA repair protein RAD50 isoform 2 [Otolemur garnettii]
Length = 1173
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 307/1172 (26%), Positives = 590/1172 (50%), Gaps = 110/1172 (9%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSK++LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R
Sbjct: 1 MISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + K++A + I + + S E + + E + P+ +L ++
Sbjct: 61 GQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + + +++ +ELE ++++F G +L + + + EK
Sbjct: 121 HNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKE 180
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+L + +R + +E + + +E ++ G+L+ + H++ + + +LA L
Sbjct: 181 RKLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLAIQLE 240
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVEL 460
LD + ++ + + K+ + +K L F++ E KQ +I+ + +K L
Sbjct: 241 LDGFERGPFSERQIKNFHKLVRERQEKEAETANQLMNDFAEKEALKQKQIDEIRDKKTGL 300
Query: 461 ESKIKSFKQQIEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
+I K +I+ K+ +L N ++ ++ S + L +L + E+ + K+ + +
Sbjct: 301 -GRIIELKLEIQSKKQHELKNAKYELQQLEGSSDRILELDQELTKAERELSKAEKNSNVE 359
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKER 579
LK E+ + ++ +L+ L +D E+ + T +++ L K K I +K R
Sbjct: 360 ALKMEVISLQNEKVDLDRTLRKLDQEMEQINHHTTTRTQMEMLTKDKADKDEQIRKIKSR 419
Query: 580 HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
H L P K L+ L S + +IN+ ++ + K L + E N ++ + L
Sbjct: 420 HSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNEL 476
Query: 640 RDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-E 698
+ ++ L+ D++ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +
Sbjct: 477 KKKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLAD 536
Query: 699 ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV 758
EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + K++ + L P+
Sbjct: 537 ENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPM 596
Query: 759 YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLL 818
++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A D+T++
Sbjct: 597 RQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIM 656
Query: 819 DQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQ 874
++ EL ++R++ +Q +K+ G+DLD QV +++EK+++L+T SKIE +
Sbjct: 657 ERFQMELKDVERKIAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNR 711
Query: 875 TRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGR 934
+ E++Q L+ N++ S++L + + LE++ EL E+++
Sbjct: 712 KLIQDQQEQIQLLKSTTNELKSEKLQISSNLQRRQQLEEQTVELSTEVQSLHREIKDAKE 771
Query: 935 KVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG 992
+V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +I NY + G
Sbjct: 772 QVSPLETTLEKFQQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYVKDIENYIEDG 829
Query: 993 TLTQLAALRESVQKLNQRK-EDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKN 1044
+E +K + + +IA+ CE+ +IN Q I Q ++E L++
Sbjct: 830 --------KEDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD 881
Query: 1045 NLTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI 1084
NLTL + + + + NE KL E + + K +H+L
Sbjct: 882 NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--ENIKRNHSLALGRQ 939
Query: 1085 KYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQ 1135
K + +++ R +RE R + K E+MI DL Y+ TL+ ++K+HS
Sbjct: 940 KGYEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSM 999
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMR 1192
KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR
Sbjct: 1000 KMEEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMR 1059
Query: 1193 NRCSAGQRVLACLIIRLFI---------------------------------------SD 1213
RCSAGQ+VLA LIIRL + S
Sbjct: 1060 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQ 1119
Query: 1214 QKNFQLIVITHDEEFIENLTAIDRAYVVRIVR 1245
Q+NFQL+VITHDE+F+E L + YV + R
Sbjct: 1120 QRNFQLLVITHDEDFVELLGRSE--YVEKFYR 1149
>gi|440796517|gb|ELR17626.1| rad50 subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 1320
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 364/1410 (25%), Positives = 636/1410 (45%), Gaps = 261/1410 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +D+L I GIR+F ++ F +PLTLIVG NG GKTTIIEC+K+A T P GA
Sbjct: 1 MTTIDKLLIQGIRSFSPQNRNIIEFYKPLTLIVGHNGAGKTTIIECLKYATTGNMPPGAK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G+ F+H DP++ + E A +KL+ N + RSL
Sbjct: 61 NGQAFIH--------------------DPKVAGEREVKAQIKLRFRNVNGKPIVCTRSLQ 100
Query: 121 LSNK-NGKDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
L+ + N K C T ++ + + A G V ++ C + E+ L+GVS+ IL NVIF
Sbjct: 101 LTQQANDKKVCKTLESAL-QTYNAAGEKVSQSFRCADLDR--EIPELVGVSRPILENVIF 157
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE S+WPL E +K+ FDEIF AT+Y KALE+IK R ++I E K + N
Sbjct: 158 CHQEESNWPLSETSVLKKKFDEIFAATRYTKALEAIKKHRKEQAQQIKECKLRLENLQNQ 217
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNM----SVMSTQY 293
K A ++ + + + + ++ EE+ ++ + I+E+ LTE +R ++M+
Sbjct: 218 KDHAHQIQRELKSKLEFQAKANEEMAALQ---REIDEQEKLLTELKRKFNSINTLMTEIK 274
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
Q K + M+ E+ + + +KQ F EL S L + +
Sbjct: 275 QLKAVRQQMVNEN-QKTYAELKQEFEESDEELLS---------------------LAASF 312
Query: 354 IQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEE 413
+E + N + KL KL R + H ++ +++++ + + +S T
Sbjct: 313 NEEMESRRQAENALEGKLEKLHRSKNQHDAALFSINEQMSSIKSAIEARSPCRSYDTRSS 372
Query: 414 G----------EGLI---------------KMSQTTIDKYLSDIK-----ILERTFS-DN 442
G + LI S+ + K+L K I+++T
Sbjct: 373 GPRRKTILAERDSLILEFIDYYGLQDFDKPPYSEAKMTKFLETTKKLLNAIMQKTMKLKE 432
Query: 443 ENTKQAE-----INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQV 497
EN A+ +N L E+ LE+++ + Q+ N+ L + ++I S+L
Sbjct: 433 ENVASAKNFSDVLNRLQSEQSTLEAQMTQKRSQLRANENKLKQLESEIKAKRALHSSLGA 492
Query: 498 LQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLA 557
L+ ++ ++Q K ++L EI ++QR ++E + + + L Q A
Sbjct: 493 LEAQMQSEQEALEQAKKEAGLEELAREIGDLMQQRKQVETGMNSLRELMRKLNLQADARA 552
Query: 558 EI-----------KSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSS 606
++ ++ + R +SK AD +L + E K +L K++++
Sbjct: 553 KLNVKKSQQREREETYRARYQSKQADFE----------AVLGQAVNIEALKPALGKSIAA 602
Query: 607 ITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL------VLG-- 658
+E++ A L ++ S+ + K LA+L +++ V+G
Sbjct: 603 -------KREEVAATRSRLEGVKMKASSLVGEEKSIKSRLAQLERQLQAKREEIKVIGED 655
Query: 659 SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVP 718
+P + +++ +++V M+ S + ++ ++I EN+ CPLC R D ++
Sbjct: 656 DRPLPVLIKEAEKKVENVRKDVLMIQSAELIYQNFIELARENQ-ECPLCDRGIHGD-ALK 713
Query: 719 GLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQE----LKPVYENIMKLQDTDIPSLR 774
+++++++ I +P K QL +Q +L E L P +++I +L+DT++P ++
Sbjct: 714 KMLDQMQSTIDNVPTSLQENK----QLLTEQETLYEQLCGLLPTWQDITRLKDTEVPQIQ 769
Query: 775 SKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER 834
+L +++++ E E+K+ LE + +E A +L D + ++ ++ L ++
Sbjct: 770 QRLSAIQQSMTELNSEIKESTLRLEKLQAEEAKASALMSDAEAILRHYKDFTVLSEQIRA 829
Query: 835 QESKI----SGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQ 890
+ES + S MR T ++D+ + KEK EL E Q + + ++ L+
Sbjct: 830 EESTLLQSSSDMR-TVEEVDKEYSTLKEKSQEL---LEASERAQKEQQARQDNIRRLESC 885
Query: 891 KNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELE--ELGRKVAPIETQLNLAQS 948
++ K L +G + L+ E+E Q E+ E G V E + LAQ
Sbjct: 886 VFELKDKLLQSKGSYDSIALLQRNMAEIENSSKTLQQEIRGAEEGLAVKLGEREEVLAQK 945
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEI--------------LNYTKRGTL 994
+ + E++ K+NE + Q + ++L ++ ++ +I L K+ T
Sbjct: 946 --NQTEAENEAKMNEVVNERQLFQERLAFIETLQKQISGKNLEELMTDEEKLAKKKQETE 1003
Query: 995 TQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEA 1054
++ A+ E V+K N T+ EI +S+A + + ++ +N+ ++K
Sbjct: 1004 ARIVAINEDVKKGND--------------TLLEIRESLATSDIFKRNIDDNIRYRKQKAD 1049
Query: 1055 VAKLN-------EELKL--SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLI------- 1098
+ KLN EE +L +E + D+ + T E QK R +N+LI
Sbjct: 1050 LEKLNTRVKKKEEEAQLENTESVEFDMDRLTSTTE--------QKKRKLNQLIGKRDTFT 1101
Query: 1099 -------REYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1139
+E IY ++K +E+ SDL KY+H L ++KYH KM
Sbjct: 1102 SQIKEHHKELAKPIYKDIDDQFRQMLIKVKTTEMATSDLEKYYHALNKALMKYHQVKMEE 1161
Query: 1140 INRLIREYWTRIYQGNDIDYISIAADVGTGSE-KRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
IN+++RE W Y+G DID I I ADV E + +YNYRV+ K E DMR RCSAG
Sbjct: 1162 INKILRELWQHTYKGQDIDTIEIRADVDPTKEGGKSSYNYRVIMVKGDTELDMRGRCSAG 1221
Query: 1199 QRVLACLIIRLFI---------------------------------------SDQKNFQL 1219
Q+VLA L+IRL + S Q+NFQL
Sbjct: 1222 QKVLASLVIRLALAETFCLNCGILALDEPTTNLDRYNVESFANALVNIIASRSQQRNFQL 1281
Query: 1220 IVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
I+ITHDEEF++ L + A Y R+ +D K
Sbjct: 1282 IIITHDEEFVQLLGRSEHADYYWRVSKDIK 1311
>gi|241997524|ref|XP_002433411.1| SMC protein, putative [Ixodes scapularis]
gi|215490834|gb|EEC00475.1| SMC protein, putative [Ixodes scapularis]
Length = 1258
Score = 332 bits (850), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 335/1328 (25%), Positives = 611/1328 (46%), Gaps = 208/1328 (15%)
Query: 1 MALLDQLHIMGIRNF-PADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M++L++L I GIR+F P D N+ ++ F PLTLI+G NG GKTTIIEC++ A T + P G
Sbjct: 13 MSMLEKLQIQGIRSFGPTDANKQMMSFFSPLTLILGSNGTGKTTIIECLRNATTGDLPPG 72
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
GK F+HDP++ + E +A +KL+ + V R
Sbjct: 73 ----------------------QGKVFIHDPKLNHETEVNASIKLKFQDVRGEPYVVNRL 110
Query: 119 LLLSNKNGKDNCATRDTTI------SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAIL 172
LL T D I K AT C +V+E L+GV +AIL
Sbjct: 111 FLLKQNKNNTTFKTVDANIVHRDQEGNKTTATSK----CCDINATVVE---LLGVPRAIL 163
Query: 173 NNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQ 232
NVIFCHQ +S+WPL EG+ +K FD IF AT+Y KALE+I+ R + I + +
Sbjct: 164 ENVIFCHQTDSNWPLSEGQTLKTKFDNIFAATQYIKALENIRKLRLEYNQGIKLLSESTK 223
Query: 233 ATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
K++AD ++ I + +K L +IE ++P++ + ++ +KE +
Sbjct: 224 YLKANKEKADEYEEEIAKDERKLADCIGTLQDIETKLEPLHLEWKEMEKKEDE----ARN 279
Query: 293 YQTK-KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ +K +ERD + + NE++ + L +K
Sbjct: 280 FHSKLSSERDQLDYTRNEIQRITRNLKESEK----------------------------- 310
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
T + E K+ ER E+ LN L +L TLC + +
Sbjct: 311 ----------TAVEETSRKV---ERKSES---LNQKL-----SLGVTLCREDSL------ 343
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSD----NENTKQAEINALIVEKVELESKIKSF 467
E + + + +D +SD+++ T + +E + Q I+++ K + E K +S
Sbjct: 344 ---EKKVSLVVSCLDNRVSDLQLNFETTKEKREAHEKSLQDSIDSVRERKSKSEQKREST 400
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEA 527
++QI N+K + + ++ + S ++ L+ ++ + ++ L + L DQLK++I
Sbjct: 401 QKQIADNQKKIMVIRKELLQAEGYCSEIRELEAEIGKFEDQLASLERELPSDQLKDKIAD 460
Query: 528 WIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLL 587
R ++E+ D+L ++ E++ Q + +E++ ++ K+ + K +R F L
Sbjct: 461 KQRSKDEITDKLENLNRELASAQKFSKEQSELEHIRQELSEKIKSLEQAKVESERKFMEL 520
Query: 588 FDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLA 647
P ++ +++ +SS+ +++ +++ + +LE + L+ +++ L
Sbjct: 521 LGTFPASDYAKQVNEKISSLGSEVSSLRDSVTKLRTTESSLETKLKMLEDDLKKKEKELD 580
Query: 648 ELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLC 707
+ ++ V GS+ + + ++ LE+ + ++E +T + ++F YI ++ ++ P CPLC
Sbjct: 581 KSRKKVISVCGSENLDGSIQQLKLEMTKMRDEKGFITGSAFMFRKYIERMRQS-PCCPLC 639
Query: 708 TRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQD 767
R FE V L+ L+ K++ +PE+ N K ID + +Q LK E + KL++
Sbjct: 640 KRHFEELELVNRLIEDLEKKMRILPEELNKKTREIDDREHKFNDMQRLKGEEEKMSKLKN 699
Query: 768 TDIPSLRSKLIELEENVIETKGELKKLKTA----LETPKTKEKTALSLQGDLTLLDQNIR 823
++P +++K++ N + L LK + L+ + A SL G+ +D+ R
Sbjct: 700 NELPEVKAKIL----NATTERDRLTSLKASKEEQLDMKIFDLEMARSLLGEAETMDRLSR 755
Query: 824 ELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEK 883
E + L+R+L+ + + ++ G ++ ++A+ ++ LN ++ES + ++
Sbjct: 756 ERDVLRRQLDSKSPNVQRLKQ-GRTMENIMAEIRD----LNGQARELESIMLDYRAKQDQ 810
Query: 884 LQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQL 943
SL N SK+L ++ L +K ELE + L+ L ++ ++ QL
Sbjct: 811 YHSLGMSLNAARSKKLQLESKKKEESRLRKQKTELESESENLKLSLDPLMKEKEELQKQL 870
Query: 944 NLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRES 1003
A ++ E ++ L + +++ + E++K+ ++ Y + +L +R+
Sbjct: 871 QKAVWAKESAVNETRRLLEDLRSELSVRMLEREDLKKHFDKVQEYFQSNNPEELQDVRKK 930
Query: 1004 VQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN--LTLLEKKEAVAKLNEE 1061
+ L E + R I+ + + ++ Q L E +LK+N L +L+ V +
Sbjct: 931 LDDLKGEIEHLQLVRDEKTALIDTLEKKLSRQELRERELKDNLHLHMLQ----VQSEQHK 986
Query: 1062 LKLSEIMISDLTKYHHTLENCVIKYHSQKMR---SINRL--------------------- 1097
+K+ EI + + ++ S+K + IN+L
Sbjct: 987 VKIDEI-------KNQMRNSGLVNLESEKKKIGEKINKLRGDRNFSESKKGELKVKIDAA 1039
Query: 1098 -----------IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1146
++Y T + + + + + DL Y+ + V+KYH QKM+ IN++I++
Sbjct: 1040 RRELSGHFKDAKKKYMTALCEKSVKDYISKDLDMYYRAVNFAVLKYHEQKMKDINKVIKQ 1099
Query: 1147 YWTRIYQGNDIDYISIAADVG-TGSE-KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLAC 1204
W Y G+DIDY+ I D G E RR YNYRVV K IEQDMR RCSAGQ+VLA
Sbjct: 1100 LWQDTYSGDDIDYVQIRTDADEKGLENSRRAYNYRVVMMKGRIEQDMRGRCSAGQKVLAS 1159
Query: 1205 LIIRLFISD---------------------------------------QKNFQLIVITHD 1225
LIIRL +++ Q+NFQ+IVITHD
Sbjct: 1160 LIIRLALAETFCQNCGILALDEPTTNLDRSNIKGLALSLGKIVEARMRQRNFQMIVITHD 1219
Query: 1226 EEFIENLT 1233
EEF+ L+
Sbjct: 1220 EEFLRLLS 1227
>gi|198401788|gb|ACH87544.1| Rad50 [Platynereis dumerilii]
gi|198401793|gb|ACH87548.1| Rad50 [Platynereis dumerilii]
Length = 1229
Score = 328 bits (840), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 343/1357 (25%), Positives = 618/1357 (45%), Gaps = 229/1357 (16%)
Query: 1 MALLDQLHIMGIRNF-PADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ + ++ I G+R+F P DKNR ++ F PLTLI+G NG GKTTIIEC+K+ T + P G
Sbjct: 1 MSSIAKMSIQGVRSFGPDDKNRGLIEFYTPLTLILGPNGTGKTTIIECLKYMTTGDLPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
++G +FVHDP+I + + V+L + VR+
Sbjct: 61 HANG---------------------SFVHDPKIANEQKVKGQVRLVFNDVRGTSCMAVRT 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ ++ + K T D + RK A G ++ + E+ +L+GVSKAIL NVIFC
Sbjct: 100 MEVTQQLKKVQFKTLDGVL-RKSLADGEHVDITSRHADLNREIPSLLGVSKAILENVIFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLNY 237
HQE S+WPL EGK +K+ FD+IF +++ AL+ I K++ +++ ++ E + +AT
Sbjct: 159 HQEESNWPLSEGKALKQKFDDIFATSRFGDALDEIRKLRMRKVKGDLNEAEVLLEAT--- 215
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
RD + I+E+++P+ KL ++ EK+ ++ + + +
Sbjct: 216 -----------------RDS----IAKIDENIEPLKTKLRKINEKQNSIYELQRKVDALR 254
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ-E 356
++ +++ +L +IK+LF+G EL+ +L FK ++ K EL +LK++ + E
Sbjct: 255 FQKKESEQTQKDLRKNIKKLFTGTTRELEQQLRDFKEIVEAKEEEL---AKLKTELNKTE 311
Query: 357 EKQSHTHINEAQMKL--GKLERDEETH----KKLNDTLKT-----KLNNLADTLCLDTTA 405
+K + ++++ L GKLE++++ H KK + T+K + +D L D
Sbjct: 312 DKLEECGMQKSEILLEHGKLEQEQKQHLENVKKRDQTVKNVAGRYGILGFSDDLEDDDIQ 371
Query: 406 KSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIK 465
K + E +YL K ++ F E Q +++ EK ++E+++
Sbjct: 372 KFKEKLE----------AKCKEYLDSSKQVKAEFDKKERDIQKKVDEARGEKTKMETELT 421
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
+ +E N ++ + ++ V+ S +L ++ L R +++ L KSL+ D+LK +I
Sbjct: 422 MKRDTMEKNTAEIKKLGKELQRVDASADSLNTVKNDLRRAEKDLEDLEKSLNVDELKGDI 481
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
+ + EL+ +L ++ E+ L + ++ K K SK I +++R +
Sbjct: 482 KTMQEDKLELDRKLKNLEYELDQLAKDSEARTQLDMFKKDKTSKQDQIRKMQQRQKKEQE 541
Query: 586 LLFDMIPEENFKN------SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
+ +E F N + D L+ I + +ED++ + L L+ + K
Sbjct: 542 V---TKYKEQFLNICNGIENFDGELTQTETKIKQKREDLSLVQGTLVVLKKYIEKLRK-- 596
Query: 640 RDQKRTLAELMDRMELVLGSKPFE--DELDRVTLELKREQEEV-SMMTSTQYLFNSYIGK 696
D L + F+ E+D + +L+ + E + S MTS + K
Sbjct: 597 -----------DDAPCPLCRRNFDAQSEIDELIRDLEDKMENLPSKMTSVNRVIKESQEK 645
Query: 697 LEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELK 756
++ + P+ + D KE+P +L++ +
Sbjct: 646 YDKMQQLKPVRANVVDLDS-------------KELP------------------TLKDRQ 674
Query: 757 PVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLT 816
EN MK +L+S + E+ E LE + E A +Q DL
Sbjct: 675 QSIENQMK-------TLKSDIAEMTE--------------TLEMKQNDESMARRIQPDLN 713
Query: 817 LLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTR 876
+D+ E+ L R++ Q +K++G S+ + V +++++ + + S+IE + +
Sbjct: 714 SIDRFNMEIKDLDRKISTQSNKLTG-SSSDRSVKDVNSERQDLQLIVENKNSEIEHKRKK 772
Query: 877 LNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKV 936
+N H E L + ND+ S++L ++ + LE+++ L + E+++ +
Sbjct: 773 INDHTEHRHKLSGEVNDLKSQKLAIENDVQQRQKLEEKRESLMAENDFLCVEIQDTEGAI 832
Query: 937 APIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQ 996
P++ +++ +E + K K +E K E+ + I Y +G
Sbjct: 833 EPVQEKIDKLMTEKSEIVKTRDSKFEQEKEKFTQAKTSQREITSLDETIKVYLSKGRDKV 892
Query: 997 LAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVA 1056
L + ++K+ + + +R + EI + + +Q +E +LK+NLTL EK+E
Sbjct: 893 LQQNEKKMKKIEDDAQYLETQRQSVNEKMTEIQEDLHSQKFKERELKDNLTLKEKEEQCG 952
Query: 1057 KLNEELKLSEIMIS-------------------DLTKYHHTLENCVIKYHSQKMRSINRL 1097
KL+ ++K E + DL + + L + + R+ +RL
Sbjct: 953 KLDVDIKKLEDDLGGLEATTLEQDRLKLNKEYNDLDREKNQLLGSLRGHQDTIQRNKDRL 1012
Query: 1098 I--------REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
+++ + LK +E+ SDL KY+ L+ ++ YH +KM IN++IRE W
Sbjct: 1013 KGDLFRDAEKKFQDSLITLKTTEMACSDLEKYYKALDRTIMSYHQKKMSEINKIIRELWR 1072
Query: 1150 RIYQGNDIDYISIAADVGTGS---EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLI 1206
Y+G+DI+ I I ++ GS KRR+YNYRVV K DMR RCSAGQ+VLA LI
Sbjct: 1073 NTYKGHDIETIEIRSNEEEGSGAAAKRRSYNYRVVMLKGDTPIDMRGRCSAGQKVLASLI 1132
Query: 1207 IRLFI---------------------------------------SDQKNFQLIVITHDEE 1227
IRL + S Q NFQL+VITHDE+
Sbjct: 1133 IRLALAETFCLNCGILALDEPTTNLDRENIESLAGALVDIIKSRSGQSNFQLVVITHDED 1192
Query: 1228 FIENLTAIDRA-YVVRIVRD---HKALAET----FSR 1256
F+E L D Y ++ ++ H L++T FSR
Sbjct: 1193 FVELLGRSDYVDYFFKVKKNKNGHSELSKTSIQDFSR 1229
>gi|403416796|emb|CCM03496.1| predicted protein [Fibroporia radiculosa]
Length = 1271
Score = 325 bits (834), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 369/1399 (26%), Positives = 632/1399 (45%), Gaps = 241/1399 (17%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I GIR+F + V+ F P+T+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLDKLAIRGIRSFDDKQIAVIEFFNPVTVIVGHNGSGKTTIIECLKYATTGDQPPNTR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ + E A VKL+ N+ + VR+L
Sbjct: 61 GGA---------------------FVHDPKMANEKEVKAQVKLRFYAANHTRMLAVRNLS 99
Query: 121 LS-NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
++ KNG T ++ ++ G + + E E+ +L+GVSKA+L NVIFCH
Sbjct: 100 VTMKKNGALTMKTLESILALADEKNGKRAAISTKCAEMDAEIPHLLGVSKAVLENVIFCH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRLRKEIPEIKAHYQATLNYK 238
QE+S WPL E +K+ FD+IF+ATKY KAL++IK +++DR+ ++KA + +
Sbjct: 160 QEDSYWPLAEPSILKKKFDDIFEATKYTKALDNIKALRKDRM----ADLKAEKERLESLS 215
Query: 239 KEADSKKQL------IYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
KE +L + ++ +L E + N + + K R + +
Sbjct: 216 KEKGHADKLKTRMSELTGTIASKEMEHGQLQKQYEELVKANARFYESATKFREIYIKVDT 275
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQ 352
KK QE + S+K+L D+ EL +L N D+ ++ Q++ +S
Sbjct: 276 LNEKKAR---YQEELDTARESVKELDGTDQ-ELTDRLR----NFDD---HMQRQKQKRSM 324
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPE 412
+ +E++ + + ER HK+L + + + +C AK Q
Sbjct: 325 GMSKEQEVDEMLAD--------ERKAHAHKQLIEDREATIKQ----IC----AKYQI--- 365
Query: 413 EGEGLIKMSQTTIDKYLSDIKILER-------TFSDNENTKQAEINALIVEKVELESKIK 465
+G + + + ++++ ++ L R D N K E N + + L ++++
Sbjct: 366 QGFDQTPLERDKVLEFITKLEDLRRRQNTETDKLQDEHNAKSEEYN---TKAMRLHTELE 422
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP------- 518
KQQ ++ + +++E + L ++L + +++D+ S+ ++
Sbjct: 423 GHKQQKSAFRERIATSTARVSEAENEVDQAEALTSQLRALQADMDEKSRRVEKSKTDIKA 482
Query: 519 ---DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINL 575
DQ ++ A R DEL AEI L Q A + + +SK +D+N
Sbjct: 483 GNFDQRLSDANAKGRSMEMKRDELT---AEIRTLSLQADARARLDLKRAELKSKSSDLNN 539
Query: 576 LKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDI----NAKEKHLYTLEAN 631
E ++ F L + + +++++ + + + R D+ N K+L EAN
Sbjct: 540 TLEINNSKFRKLVGI---DAHPDTMEREVERVAIEKEREHTDLENETNIASKNLQAAEAN 596
Query: 632 VSNSSKTLRDQKRTLAELMDRMELVL---GSKPFEDELDRVTLELKREQEEVSMMTSTQY 688
+SN L +++ + L ++ L G E L E+ +EE+ Q
Sbjct: 597 LSNLKAQLSTKQKEIQRLDKKIAFELKDAGFSSIESGLKEADYEIDTRKEELGKTAGAQD 656
Query: 689 LFNSYIGKLEENEPR--CPLCTRFFESDYSVPGLVNKLKTKIKE-IPEQTNNKKTHI--- 742
L Y+ L+ + R CPLCTR SD + +K IK+ P K+ +
Sbjct: 657 L---YLRLLQVGKGRKCCPLCTRNM-SDLELDVYDKNVKENIKKSTPAAIKETKSELAMW 712
Query: 743 DQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENV-IETKGELKKLKTALETP 801
+ KQ + LQ E I K++ P L +++ E ++ + I T+ + L+ E
Sbjct: 713 EDALKQLQGLQMDDNTRETIQKIE---APKLEAQIKEHDDEMPILTERAEEALRKLNEVK 769
Query: 802 K-TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKIS--GMRSTGVDLDQVL----- 853
K KE +A+ T + Q +++ L+RE+ ES++S G T DL Q L
Sbjct: 770 KEIKEISAMRQHA--TSVSQTQKDIERLKREISSLESELSATGSTKTADDLQQELDELSA 827
Query: 854 ---AQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS 910
A +EK+N L T R ++ + L +H+ +L +++ +++++ S Q+ + +
Sbjct: 828 EMRANDREKQN-LMTERDRLMNA---LRNHDTELGTMRVRESELKS-QIREKT------A 876
Query: 911 LEDRKCELEGMDSVYQTELEELGRKVA----PIET---QLNLAQSELDALKKEHKKKLNE 963
LE R EL + + +L++L K+A PIE Q + AQ EL+A K++
Sbjct: 877 LEGRIKELRSDIASFTNQLKDLDVKIADAQGPIEKLEQQYHEAQRELNA-------KISR 929
Query: 964 EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIA 1016
QD ++++ I I Y + +L E +Q+L + EDI +
Sbjct: 930 AQRASQDLNMSADKLESINKTIEKYVRERKARRLKECNEKIEEHETEIQRLGLQLEDIRS 989
Query: 1017 KRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISD----- 1071
+ ++ I+E S+AN L+ NL + ++ +A +E+ L ++ +
Sbjct: 990 TIHLIDKEISESGASVAN-------LRENLRIRRLRQDIAATQDEIDLIDLEEAAKAKRI 1042
Query: 1072 ---------------LTKYHH-----TLENCVIKYHSQKMRSINRLIREYWTRIYQLKLS 1111
+KY H + +K M+ + ++Y ++ ++K+S
Sbjct: 1043 FEEKYNVEKQRETHIQSKYAHIGGELSSLQAQVKTLQTDMKDYKDIGKKYRDQLIKVKMS 1102
Query: 1112 EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE 1171
++ +DL KY L+N ++KYHS KM +N +R W + YQG DID I I++D G+
Sbjct: 1103 DMANNDLEKYAKALDNAIMKYHSLKMEEVNDTMRHLWNKTYQGTDIDGIKISSDSEGGAT 1162
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIEN 1231
K R+YNYRVV K+ +E DMR RCSAGQ++LA +IIRL ++D
Sbjct: 1163 K-RSYNYRVVMTKDNVEMDMRGRCSAGQKMLASIIIRLALAD------------------ 1203
Query: 1232 LTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN-----AS---------D 1277
+F +NCGI ALDEPT LD +N AS
Sbjct: 1204 ---------------------SFGQNCGILALDEPTNALDTENIDALAASLVDIINERKG 1242
Query: 1278 QKNFQLIVITHDEEFIENL 1296
+FQL++ITHDE F+ L
Sbjct: 1243 NSSFQLVIITHDENFLRKL 1261
>gi|145341341|ref|XP_001415771.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575994|gb|ABO94063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1313
Score = 318 bits (816), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 362/1389 (26%), Positives = 610/1389 (43%), Gaps = 206/1389 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +D+L I GIR+F + V++F +PLTLIVG NG GKTTIIEC+K T E P
Sbjct: 1 MCTVDKLLIKGIRSFSPENEHVIQFPKPLTLIVGRNGAGKTTIIECLKMGSTGELP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SA SG+ F+HDP++ E A +KL+ V+RS
Sbjct: 57 ----------------PSARSGQAFIHDPKVADVTEVKAQIKLRFRNVMGKPFVVIRSFQ 100
Query: 121 LSNK-NGKDNCATRDTTI-SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K GK D+ I S V + C+ + E+ L+GVSKAIL NV+F
Sbjct: 101 LTQKARGKLEKKDLDSVIQSVDDGGKMVSISRKCVDINA--EVPALMGVSKAILENVVFV 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL + +K+ FDEIF ATKY KALE I+ + I E K ++ K
Sbjct: 159 HQEESNWPLGDSAGLKKKFDEIFSATKYTKALEHIRKLKTEQTGLIREFKGKVESLKIQK 218
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLV----------QLTEKERNMSV 288
A + N K D + + ++E ++ E++ Q+ EK RN +
Sbjct: 219 DHAMKLRATFETNRDKADDLTDHISSLEAKIQAAQEEIAQIEAVFSSVRQIHEK-RNALI 277
Query: 289 MSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKIN---LDEKCSELEN 345
+ T + R + + ES + GD K K LD K +++
Sbjct: 278 ARREAVTSENARKLASMNTELTESLEELEKMGDT--FNQKFATMKQERDVLDRKLNDV-- 333
Query: 346 QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTA 405
RL+ + ++E ++ G+L + E H K +A+ +
Sbjct: 334 --RLEMEALKEHRERMIKT------AGRLGAEAEAHTK----------RIAERSVFAQSI 375
Query: 406 KSQYTPEEG----------------EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAE 449
+Y PE G + + M Q IDK S + L+ A+
Sbjct: 376 AKKY-PEIGVEISPEIAPNALSNALDSRLSMRQQAIDKMRSKHRDLDTACG-------AK 427
Query: 450 INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEI 509
I+ + +I+ +Q K L + ++ E ++S ++ L+ ++ R N
Sbjct: 428 IDEITERLSSHTQRIQIINEQQAARKARLEVINKELGENAVNESAIEELENRVKRANEAY 487
Query: 510 DQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEI-SILQAQNITLAEIKSLKNRKES 568
SKS QLK ++E ++ ELE E+ + +E S +QA +E+K ++ +KE
Sbjct: 488 ASKSKSDFATQLKVDMEQADQKLGELEREMTKLRSEQESAVQAGE---SEMK-VRMKKEE 543
Query: 569 KLADINLLKERHD-RAFHL--LFDMIPEEN--FKNSLDKALSSITFDINRIQEDINAKEK 623
N L+ D RA L +F N K+++ + L+ ++ + Q + N
Sbjct: 544 YSTKNNTLETIVDSRAEQLREIFGAAMPMNIELKDAVIEKLNELSEETANAQTECNTNTS 603
Query: 624 HLYTLEANVSNSSKTLRDQKRTLAEL--MDRMEL---VLGSKPF---EDELDRVTLELKR 675
++ LE + + L+ +R L E+ +++E +LG+ F + LD V E+
Sbjct: 604 NVAVLEHELEAARAALQSDRRELEEIKSTEKIEANVRLLGAGGFAGYREALDAVNREVTD 663
Query: 676 EQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQT 735
+E ++ +T+ Q LF+ ++ + E+N+ C LC R F S + + ++T I P Q
Sbjct: 664 VEENLTTLTALQTLFSKFVAEAEKNQT-CSLCKRGFPSFNAADTFIQDMQTNIANAPAQI 722
Query: 736 NNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLK 795
+ + + + +++ LQ L + + IP+ + LE+++ + + + K +
Sbjct: 723 ASLEERVQKTRERRELLQALSETASRFKAVSEK-IPNSERDVSNLEDSLADAQAKKKNAE 781
Query: 796 TALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKI---SGMRSTGVDLDQV 852
L + ++ SL D + + +E++ LQ ++ ES+ +G + +D+
Sbjct: 782 ENLADRQRARESTASLLEDAGNISRLAKEVDALQSTIDSLESRYLESNGETRSALDIS-- 839
Query: 853 LAQQKEKKNELNTFRSKIESGQ-------TRLNSHNEKLQSLQKQKNDIHSKQLTVQGGA 905
NE+ K E+ R H +L +L++ D+ + L Q
Sbjct: 840 --------NEIEMLDVKREAADREKAILVKRKERHETELLNLERNARDMREELLVAQSRG 891
Query: 906 GMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEG 965
L+ ++ + E + + + AP + SE ++ +K H ++ +
Sbjct: 892 EKRTQLKAEMADISKATAESAAEQKRMEEERAPGLAEKEKLSSERESQRKTHAQEQDALE 951
Query: 966 AKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTI 1025
+I++ + ++ + + I GT +L S+++ N + E++ AK + +
Sbjct: 952 NEIRELQRVVDTITSMSKTIEAADAAGTSERLVEHNRSLEETNGKIEELEAKLQTRGKQL 1011
Query: 1026 NEINQSIANQSLEEIDLKNNLTLLE-KKEAVAKLNEELKLSEIM-----ISDLTKYHHTL 1079
+ IA Q+ + +L++N+ L K+E L E +L+ M + D+ K +
Sbjct: 1012 KAKEEVIARQNDLKRELEDNIAFLRGKREEETILKEIDQLTAEMHNMGQMPDVEKKLRQV 1071
Query: 1080 ENCV-------------IKYHSQKMRSI---------NRLIREYWTRIYQLKLSEIMISD 1117
N +K H + M++ N + + ++ +LK E++ D
Sbjct: 1072 TNVKNDFRTEAAEAQGRVKAHREAMKAAGDQLKGAEYNNIEKRLSKQLVELKTVEMVSDD 1131
Query: 1118 LTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYN 1177
L +YH L+ ++ +H+ KM IN+++RE W R Y+G DID I I +D G+ R +YN
Sbjct: 1132 LDRYHKALDKALMSFHATKMEEINKVVRELWQRTYRGQDIDSIQIRSD-SDGTTGRSSYN 1190
Query: 1178 YRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDR 1237
YRVV G E +MR RCSAGQ+VLACLIIRL
Sbjct: 1191 YRVVMLCGGAELEMRGRCSAGQKVLACLIIRL---------------------------- 1222
Query: 1238 AYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNAS--------------DQKNFQL 1283
ALAETF NCGI ALDEPTTNLD N+ DQ+NFQL
Sbjct: 1223 -----------ALAETFCLNCGILALDEPTTNLDAPNSDALARSLIEIMKSRRDQENFQL 1271
Query: 1284 IVITHDEEF 1292
IVITHD EF
Sbjct: 1272 IVITHDMEF 1280
>gi|170649702|gb|ACB21284.1| DNA repair protein RAD50 (predicted) [Callicebus moloch]
Length = 1102
Score = 318 bits (815), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 319/1245 (25%), Positives = 601/1245 (48%), Gaps = 189/1245 (15%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELTAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MICTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E YQ L Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKE----YQMELKYL 213
Query: 239 KEADSKKQLIYNN-TQKRDQ---SFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K I + T K Q S E + + E + P+ +L ++ + + + +
Sbjct: 214 KQNKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIIRLDNEIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
++ + +++ +ELE ++++F G +L + + + EK + + +R +
Sbjct: 274 ALESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERKWVDCQRELEKLN 333
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+E K + +E ++ G+L+ + H++ + + +LA L LD + ++ +
Sbjct: 334 KESKLLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQI 393
Query: 415 EG---LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIK 465
+ L+K Q K S L F++ E KQ +I+ + +K +EL+S+I
Sbjct: 394 KNFHRLVKERQEMETKTASQ---LMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEIL 450
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
S KQ +L NV ++ ++ S + L +L + E+ + K+ + + LK E+
Sbjct: 451 SKKQN------ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEV 504
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
++ +L+ L +D E+ L T +++ L K K I +K RH
Sbjct: 505 INLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELT 564
Query: 586 LLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRT 645
L P K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++
Sbjct: 565 SLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKRKEEQ 621
Query: 646 LAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRC 704
L+ D++ V GS+ F+ +LDR+ E+++ ++ +M+ +++ +I +L +EN+ C
Sbjct: 622 LSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCC 681
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
P+C R F+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+
Sbjct: 682 PVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTESDLKKKEKRRDEMLGLVPMRQSIID 741
Query: 765 LQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
L++ +IP LR+KL + ++ K ++++ +T L T +E++A D+T++++
Sbjct: 742 LKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKMCLTDVTIMER---- 797
Query: 825 LNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
+ + ++S + +T L++ Q+EK+ +N + I+ Q +LN EK+
Sbjct: 798 -------FQDAKEQVSPLETT---LEKF---QQEKEELINKKNTSIKIAQDKLNDIKEKV 844
Query: 885 QSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLN 944
+++ DI + +Q G K + ET+LN
Sbjct: 845 KNIHGYMKDIEN---YIQDGKDDYKKQK---------------------------ETELN 874
Query: 945 LAQSELDALKKEHKKKLNE---------EGAKIQD--------YTKQLEEVKRIKLEILN 987
++L+ +K HK+K+NE + KIQ+ K+ EE+K ++ +
Sbjct: 875 KVIAQLNECEK-HKEKINEDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEDRKQ 933
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIA---NQSLEE--IDL 1042
+ K Q+ ++ QKL + ++I KR N ++A + EE I
Sbjct: 934 HLKEMGQMQVLQMKNEHQKLEENIDNI--KR----------NHNVALGRQKGYEEEIIHF 981
Query: 1043 KNNLTLLEKKEAVAKLNEE---LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1099
K L + ++A K E ++ +E++ DL Y+ TL+ ++K+HS KM IN++IR
Sbjct: 982 KKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIR 1041
Query: 1100 EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
+ W RS Y+G DI+Y
Sbjct: 1042 DLW-----------------------------------RS-----------TYRGQDIEY 1055
Query: 1160 ISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
I I +D + S+KRR YNYRVV K DMR RCSAGQ+
Sbjct: 1056 IEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKA 1100
>gi|224060335|ref|XP_002300148.1| predicted protein [Populus trichocarpa]
gi|222847406|gb|EEE84953.1| predicted protein [Populus trichocarpa]
Length = 1316
Score = 317 bits (811), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 370/1411 (26%), Positives = 636/1411 (45%), Gaps = 247/1411 (17%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F RPLTLIVG NG GKTTIIEC+K A T E P
Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVITFLRPLTLIVGPNGAGKTTIIECLKVACTGELP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
+A SG +F+HDP++ + ET +KL+ T D VC+ RS
Sbjct: 57 ----------------PNARSGHSFIHDPKVAGETETKGQIKLRFKTAAAKDVVCI-RSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ ++WPL + +K+ FD+IF AT+Y KALE IK +EI K + K
Sbjct: 160 QDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
A ++ I + +K + + +E +++ ++ K+ ++M + Q K E
Sbjct: 220 AAYKLRESIGQDQEKTEILKVQSQELESNLQNLDAKIHHTEVTLKDMRKLQDQITIKTAE 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELE----------NQERL 349
R + +++ + ELQ +K DEK + LE N
Sbjct: 280 RSTLFREQQRQYAALAEENEDTDEELQE----WKTKFDEKIASLESNICKLEREMNDMET 335
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
K ++++ +INE ++ +L+ + E H L + + + + L + +
Sbjct: 336 KGSFLKQ------NINEYIREISRLQTEAEAHASLKNERDSNIQKMYTRHNLGPLPNAPF 389
Query: 410 TPEEGEGL---IKMSQTTIDKYLSD--------IKILERTFSD-------NENTKQAEI- 450
+ + L +K +DK L D +K E + D E KQA++
Sbjct: 390 SDDVALNLTNRLKSRLVDLDKDLQDKKTSNDTEVKRAENCYWDANERWKNTEAQKQAKVE 449
Query: 451 --NALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSE 508
N+++ E E + SF++QI ++ +++ + +++ V +
Sbjct: 450 IKNSILNRITEKEREHSSFEEQISH---------VNLSHIDEKEKNMRI------EVERK 494
Query: 509 IDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKES 568
+QL++ E E+ IRQ+ + EL I+ +I +L + LA + +
Sbjct: 495 TNQLAE--------REFESHIRQK---QSELYGIEQQIKVLNREKDILAGDSEDRVKLSL 543
Query: 569 KLADINLLKERHDRAFHLLFDMI---------PEENFKNSLDKALSSITFDINRIQEDIN 619
K ++ K++H + D I P+++ K + + L ++ + + +
Sbjct: 544 KKVELENHKKKHRKIIDECKDKIRGVLKGRLPPDKDLKKEITQTLRALGLEFDDLNMKSR 603
Query: 620 AKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSK-------PFEDELDRVTLE 672
EK + L+ + + L Q++ MD + + SK F +L LE
Sbjct: 604 EAEKEVNVLQMKIQEVNNNLSKQRKD----MDSRKRFIESKLQSLDQLSFSVDLYLKALE 659
Query: 673 LKREQEEV-----SMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTK 727
+E+ +V ++ + +F+ + ++ CP C R F ++ V K + K
Sbjct: 660 SSKEKRDVQKSKYNIADGMRQMFDPF-ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVK 717
Query: 728 IKEIPEQT---NNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENV 784
E + + ++ D L +Q L +L+ VYE K+ IP L EL E +
Sbjct: 718 AASSAEHMKVLSMESSNADTLFQQ---LDKLRMVYEEYTKIGKETIPLAEKNLSELTEEL 774
Query: 785 IETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS 844
+ L + L K ++ + +L + D+ +E+ T Q++++ E K+ R
Sbjct: 775 EQKSQALDDVLGVLAQTKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLEYKLD-FRG 833
Query: 845 TGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNE--KLQSLQK-QKNDIHSKQLTV 901
GV +E ++EL++ + T+ N HNE KL+ Q+ +ND+ Q+
Sbjct: 834 QGV------RTMEEVQSELSSLQG------TKDNLHNEVEKLRDEQRYMENDLSHIQIRW 881
Query: 902 QG-------GAGMLKSLEDRKCELEGMDSV-YQTELEE--LGRKVAPIETQLNLAQSELD 951
A +L+ ++ + ELE + +Q ELEE L V P+ + Q E +
Sbjct: 882 HALREEKVTAANILRDVKKSEEELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHN 941
Query: 952 ALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY--TKRGT----LTQLAALRES-V 1004
LK + +++ E+ ++ ++ ++++ + RI +I Y K+G + + +L ES +
Sbjct: 942 ELKVQLEREYEEQKKQLDNFKQEVDTLVRIASKIREYYNLKKGERLKEMQEKLSLSESQL 1001
Query: 1005 QKLNQRKEDIIA-----KRGVCERTINEINQSIAN------------------QSLEEID 1041
Q + RK++I+A K V R+ + + +SI + +SLEE
Sbjct: 1002 QGCDARKQEILAELNDSKNAV--RSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEERI 1059
Query: 1042 LK-NNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTL---ENCVIKYH-SQKMRSINR 1096
LK + E A+L + L+ E ++S+L ++ T+ +N + K K
Sbjct: 1060 LKIGGFSSFE-----AELAKLLQERERLLSELNRFRGTMSVYQNNISKNKIDLKQVQYKD 1114
Query: 1097 LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGND 1156
+ + Y+ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W + Y+G D
Sbjct: 1115 IDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQD 1174
Query: 1157 IDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQK 1215
IDYISI +D G G+ R+Y+Y+VV + E +MR RCSAGQ+VLA LIIRL
Sbjct: 1175 IDYISIHSDSEGAGT---RSYSYKVVMQTGDAELEMRGRCSAGQKVLASLIIRL------ 1225
Query: 1216 NFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA 1275
ALAETF +CGI ALDEPTTNLD NA
Sbjct: 1226 ---------------------------------ALAETFCLHCGILALDEPTTNLDGPNA 1252
Query: 1276 SD--------------QKNFQLIVITHDEEF 1292
Q+NFQLIVITHDE F
Sbjct: 1253 ESLAAALLRIMEDRKGQENFQLIVITHDERF 1283
>gi|449548873|gb|EMD39839.1| hypothetical protein CERSUDRAFT_63389 [Ceriporiopsis subvermispora B]
Length = 1261
Score = 316 bits (809), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 370/1400 (26%), Positives = 636/1400 (45%), Gaps = 228/1400 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L I GIR+F + V+ F P+T+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLNKLAIRGIRSFDDKQISVIEFFSPVTVIVGHNGSGKTTIIECLKYATTGDQPPNTR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ + E A VKL+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPKMANEKEVKAQVKLRFDAANGQRMLAVRNLS 99
Query: 121 LS-NKNGKDNCATRDTTISRKIFATGVQKNLGCLQ---QESVLEMCNLIGVSKAILNNVI 176
++ KNG T ++ ++ G + G + E E+ +L+GVSKA+L NVI
Sbjct: 100 VTVKKNGAMTMKTLESILALADKTGGREGKRGVISTKCAEMDTEIPHLLGVSKAVLENVI 159
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRLRKEIPEIKAHYQATL 235
FCHQE+S WPL E +K+ FD+IF+ATKY+KAL+SIK +++DR+ E+ K
Sbjct: 160 FCHQEDSYWPLSEPSTLKKKFDDIFEATKYSKALDSIKALRKDRV-AELKVEKERLDGLS 218
Query: 236 NYKKEAD---SKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
K AD ++K + ++ +EEL E + N+K K R + + +
Sbjct: 219 REKARADKLNNRKSDLNCTIAAKEIEYEELKKQYELLVKANQKFYDSATKFREI-YLKVE 277
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLD-EKCSELENQERLKS 351
TK+ R QE +E ++++L G EL ++ F ++ +K +L +L
Sbjct: 278 DLTKQRAR--YQEELDETRETLQEL-DGSDEELADRMKNFDAHIARQKQKQLSENSKL-- 332
Query: 352 QYIQEEKQS--HTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
Q I+++ +S TH+ + + L ++ +++ D + L + +AK Q
Sbjct: 333 QAIEDDLKSARETHVKLSIDQGEYLAEEKSQEQRIKD---------CEGLIREISAKHQI 383
Query: 410 TPEEGEGLIKMSQTTIDKYLSDIKILERTFSD---------------NENTKQAEIN--A 452
+ L + L D+ L+R + N N++Q ++N
Sbjct: 384 KGYDVSPLGRDKTLDFISLLGDL--LQRQHKETDRLQEEANGHTDEYNRNSRQLQMNLDR 441
Query: 453 LIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL 512
L E+ L ++ S +++I N ++ + L+ L+ + + I +
Sbjct: 442 LKQERATLHDRVTSLQEKIH-------NTEIEVEAAQALTAELRTLKADMEEIEHRIKKS 494
Query: 513 SKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLAD 572
+ ++ + + + LE + V++AE+S AQ A + K + K A+
Sbjct: 495 REEIEKAKYDEHLAEKNTKAKNLELKREVLNAELSKTSAQAEARARLDLKKTELKGKSAE 554
Query: 573 I-NLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN 631
+ N+L R L+ E + LD+ S KE+ LE
Sbjct: 555 VKNILNVNSARFRKLVGSEAQPETMEQELDRVFSR--------------KERECVDLEKQ 600
Query: 632 VSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFN 691
+ ++++L+ + L L R EL K F D + +F
Sbjct: 601 SAAANQSLQVAQTELTNL--RREL----KQFCD---------------IGKNDGAHGIFK 639
Query: 692 SY--IGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ 749
+ +G+++ N CPLC+R D V L KT PE T ++ + + +
Sbjct: 640 HFLQVGQVKRN---CPLCSR----DMDVSELATFEKTSS---PEATARFQSELTEWEQCL 689
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTAL 809
R LQ L + KL+ +++P L +K+ E EE + G+ ++L+ L K + K
Sbjct: 690 RDLQSLTTYSVSSSKLR-SEVPMLIAKVEEKEEELPILIGKAEELQERLNFMKRELKDMS 748
Query: 810 SLQGDLTLLDQNIRELNTLQRE---LERQESKISGMRSTG---VDLDQVLAQQKEKKNEL 863
+L+ T++ + R++ L+RE LER S ++S +LD V+ + + E
Sbjct: 749 NLRQQATVVSRTQRDVERLEREIKDLERTLSDAGSLKSVQDIERELDSVVGELRANDRER 808
Query: 864 NTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDS 923
++ + + + +H +L +Q + ++++S+ ++ + + + +ED + ++ ++
Sbjct: 809 QNLMTERDRQMSAVRTHENELHGMQLRHSELNSR---LRDRSALERRIEDMRQDITSANA 865
Query: 924 VYQTELEELGRKV----API---ETQLNLAQSELD---ALKKEHKKKLNEEGAKIQDYTK 973
++EL K+ API E Q +L+ EL A ++ + LN + ++Q K
Sbjct: 866 ----RIKELDGKIIEAQAPIDQLEEQYHLSHRELTSRLAEAQQASQALNADSDRLQMNHK 921
Query: 974 QLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIA 1033
Q+E R K + + ++ E +Q L+ R E + E+ INE S+A
Sbjct: 922 QVERYIRDKRHL---RLKECEARINEYEERIQDLSLRAEAARQVISLIEKEINESGASMA 978
Query: 1034 N--------QSLEEIDLK----NNLTLLEKKEAVAKLNEELKLSEIMISDL-TKYHH--- 1077
N + L +I N+ + E A E+ + + ++L +KY H
Sbjct: 979 NLRANIRVRRLLRDIAATEAEINSFDMEEAARAKRIFQEKYQFEKQKETELQSKYAHVGG 1038
Query: 1078 ---TLENCVIKYHS--QKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKY 1132
+ ++ V + + Q+ +SIN+ +Y ++ ++K+S++ +DL KY L++ ++KY
Sbjct: 1039 ELSSFKSQVQQLDNDLQEFKSINK---KYRDQLVKVKMSDMANNDLEKYAKALDSAIMKY 1095
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMR 1192
H+ KM +N +R W + YQG DID I I++D G +RTYNYRVV K+ +E DMR
Sbjct: 1096 HALKMEEVNDTMRHLWNKTYQGTDIDGIKISSD-SEGGPSKRTYNYRVVMTKDQVEMDMR 1154
Query: 1193 NRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAE 1252
RCSAGQ++LA +IIRL ALA+
Sbjct: 1155 GRCSAGQKMLASIIIRL---------------------------------------ALAD 1175
Query: 1253 TFSRNCGIFALDEPTTNLDIKN-----AS---------DQKNFQLIVITHDEEFIENLTA 1298
+F +NCGI ALDEPT LD +N AS + NFQLI+ITHDE F+ L
Sbjct: 1176 SFGQNCGILALDEPTNALDTENIDALAASLVDIINERKNHANFQLIIITHDENFLRKLGQ 1235
Query: 1299 ID-RAYVVRIVRDHKGLSDI 1317
D Y R+ RD + S I
Sbjct: 1236 SDVMEYYWRVSRDSRQKSVI 1255
>gi|351697140|gb|EHB00059.1| DNA repair protein RAD50 [Heterocephalus glaber]
Length = 1159
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 279/1077 (25%), Positives = 559/1077 (51%), Gaps = 53/1077 (4%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNF---------VHDPRIGKKDETHAIVKLQCTCEN 109
+ G FVHDP++ ++ + A F V + ++ + A ++LQ N
Sbjct: 61 -TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGECIAVQRSMVAQETDVRAQIRLQFRDVN 119
Query: 110 NDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSK 169
+ + V RS++ S K+ K T + ISR V + C + + EM + +GVSK
Sbjct: 120 GECIAVQRSMVCSQKSKKTEFKTLEGIISRIKHGEKVSLSSKCAEIDR--EMISALGVSK 177
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKA 229
++LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E +
Sbjct: 178 SVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQAQGQKVKECQT 237
Query: 230 HYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-V 288
+ K++A + I + + S E + + E ++P+ +L ++ E N+S +
Sbjct: 238 ELKYLKQNKEKACEIRDQITSKEAQLMSSKEIIKSYENELEPLENRLEEI---EHNLSKI 294
Query: 289 MSTQYQTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ 346
M + K E + +++ +ELE ++++F G +L + + + EK L +
Sbjct: 295 MRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDC 354
Query: 347 ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAK 406
+R + +E + + +E ++ G+L+ + H++ + + +LA L L+
Sbjct: 355 QRELDKLNKESRLLNQEKSELLVEQGRLQLQADRHQEHIQARDSLIQSLATHLELEGFEH 414
Query: 407 SQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKS 466
++ + + ++ + ++ K L F + E KQ +I+ + +K L +I
Sbjct: 415 GPFSDRQIKNFHRLVRERQEQEAETAKKLMNDFEEKETLKQKQIDEIRDKKTGL-GRIME 473
Query: 467 FKQQIEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
K +I K+ +L +V ++ ++ S + L +L + E+ + K+ + + LK E+
Sbjct: 474 LKSEILSKKQNELKSVKYELQQLEGSSDRILELDQELTKAEHELSKAEKNSNIETLKTEV 533
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
++ +L+ L +D E+ L T +++ L K K I +K RH
Sbjct: 534 INLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELT 593
Query: 586 LLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRT 645
L P K L+ L S + +IN+ ++ + K L + E N ++ S L+ ++
Sbjct: 594 SLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHISNELKRKEEQ 650
Query: 646 LAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRC 704
L+ D++ V GS+ FE +LDR+ ++++ ++ +M+ +++ +I +L +ENE C
Sbjct: 651 LSNYEDKLFDVCGSQDFESDLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENESCC 710
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
P+C R F+++ + +++ L++K++ P++ + + + + K++ + L P+ +NI+
Sbjct: 711 PVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTELELKKKEKRRDEMLGLVPMSQNIID 770
Query: 765 LQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
L++ +IP LR+KL + ++ K ++++ +T L T +E++A D+T++++ E
Sbjct: 771 LKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQME 830
Query: 825 LNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSH 880
L ++R++ +Q +K+ G+DLD QV +++EK+++L+T SKIE + +
Sbjct: 831 LKDVERKIAQQAAKLQ-----GIDLDRTVQQVNKEKQEKQHKLDTVSSKIELNRKLIQDQ 885
Query: 881 NEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIE 940
E++Q L+ N++ S++L + + LE++ EL E+++ +V P+E
Sbjct: 886 QEQIQHLKSTTNELKSEKLQIATNLQRRQQLEEQTVELSTEVQSLHREIKDAKEQVNPLE 945
Query: 941 TQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG------ 992
T L Q E + L KK+ K+ ++ K+ D ++++ + I NY + G
Sbjct: 946 TALERFQQEKEELVNKKQASNKMAQD--KLNDIKEKVKNIHGYVKNIENYVQDGKDDYKK 1003
Query: 993 -TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
T+L + + + +++KE I + G + Q I Q ++E L++NLTL
Sbjct: 1004 QKETELNTVIAQLSECDKQKEKINKEMGT-------MRQDIDTQKIQERWLQDNLTL 1053
>gi|393212661|gb|EJC98161.1| hypothetical protein FOMMEDRAFT_171500 [Fomitiporia mediterranea
MF3/22]
Length = 1320
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 359/1411 (25%), Positives = 642/1411 (45%), Gaps = 201/1411 (14%)
Query: 1 MALLDQLHIMGIRNFPADKN-RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
MA L++L I GIR+F DKN V+ F P+T+IVG NG GKTT+IEC+K+A T + P
Sbjct: 1 MASLNKLAIRGIRSFD-DKNIAVIEFFSPVTVIVGHNGSGKTTVIECLKYATTGDQPPN- 58
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
S G FVHDP++ + E A VKL+ N + VR+L
Sbjct: 59 --------------------SRGGAFVHDPKMANEKEVKAQVKLRFVAANGQRMLAVRNL 98
Query: 120 LLSNKNGKDNCATRDTTISRKIFA----TGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
++ K K T T S A G + + E E+ NL+GVSKA+L NV
Sbjct: 99 SVTVK--KTAGLTMKTLESILSLADGNPNGKRATISTKCAEIDAEIPNLLGVSKAVLENV 156
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S WPL E +K+ FD+IF+AT+Y KAL++IK R E+ K ++
Sbjct: 157 IFCHQEDSYWPLAEPAALKKKFDDIFEATRYTKALDAIKALRKERVAELKVDKERLESLS 216
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
K AD K ++++ + S +E+ + + + E+ QL + +T+++
Sbjct: 217 REKAHADKLKARVHDS--QSSISVKEMRH-----EKLREECDQLIASNKRFYESATKFRE 269
Query: 296 KKTERDMIQ-------ESCNELESSIKQLFSGDK--AELQSKLNLFKINLDEKCSELENQ 346
K E + +Q + E + +K++ D AE + + +K ++K L +
Sbjct: 270 KYIEIEHLQNDVERYTKDLEEAMAHVKEMTESDDQLAERRRNFDRYKKEAEQK---LLRE 326
Query: 347 ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAK 406
ER +++ + + ++ + + G LE +++ H++ + +++ +A+ +
Sbjct: 327 ERRLQDTLEDLETARKNLMTLRQERGGLEAEKKKHEQDVEERDKEIHRIAEQFHFRGFER 386
Query: 407 SQYTPEE---GEGLI----KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVE 459
Y E+ GL+ K S ++K + + F D + E L +K
Sbjct: 387 LPYEREQLLSFRGLLDDMAKRSIGHLEKLQGEAATAQAEFKDKQANLHTEHRLLEQQKFN 446
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
L+ +I S ++ I ++ L++ + E++ Q+ +Q ++ + SEI
Sbjct: 447 LQDQIASLQKSISTSESTLSSGHSLPRELSTLQADMQEKAARIESIKSEIKDAMYEAKIQ 506
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKER 579
+ N+I A +R L EL L Q A++ ++ + K D+ + E
Sbjct: 507 EASNKIRALEEKRENLNQEL-------KNLSLQADARAKLDLIRADVQKKAQDMKDIIEI 559
Query: 580 HDRAFHLLFDM-IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKT 638
++ F L + I EN + +D+ L + I+ D N +L LE+ VS +
Sbjct: 560 NNAKFRKLIGLDIRAENMERDVDRTLGQKEREAADIENDANDANANLRHLESTVSTMTSQ 619
Query: 639 LRDQKRTLAELMDRMELVL-GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI--G 695
L+ ++ L L R++ L G + LD EL + ++ T+ ++ + G
Sbjct: 620 LKQKRDDLKGLDKRLKDELEGHASVQTALDEADAELADRRARLTTGEGTKKVYELLLRSG 679
Query: 696 KLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEI-PEQTNNKKTHIDQLCKQQRSLQE 754
K + +C C R D+ + L+ ++ ++ PE K + + + LQ
Sbjct: 680 KALK---KCTACNRAL-GDHEMKDFEKHLEGQMNKLSPEAQAEIKEEAKEWEDEVKRLQG 735
Query: 755 LKPVYENIMKLQDTDIPSLRSKLIELEENVIET-------KGELKKLKTALETPKTKEKT 807
L P+ +L+ +IP L ++L + E +V E + +L+K++ L+ +T ++
Sbjct: 736 LLPMELTRDRLKAQEIPQLETRLKQTEASVSEALSSKDIAQEKLEKMRQELKELQTLKQQ 795
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS--TGVDLDQVLAQQKEKKNELNT 865
A ++ DL + +R E+ R E +S S T D+ + LA + +L
Sbjct: 796 ASTV-TDLRASSERLR------GEVARLEESLSATGSVKTADDVQEELANLSTEIRKLER 848
Query: 866 FRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVY 925
+S I+ N +++ L++Q++++++ +L + + ++++K +E
Sbjct: 849 EKSTIQ------NDREQQINRLRRQEDELNAIKLQ---ESSLRHKVQEQKL-VEDKLVTM 898
Query: 926 QTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIK--- 982
Q EL+E ++ +E ++ A L+ L++E+ E +++ +Q E+V+R +
Sbjct: 899 QQELKESSERLKSLEEKIKTALQPLERLQREYDLFKEESDEQVKKAQEQCEQVRRNQDAL 958
Query: 983 ------LEILNYTKRGTLTQ-----LAALRESVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+E+ +RG Q + A ES+++ E+I +G E+ I+E +
Sbjct: 959 GRANKDIEVYVRNRRGRELQRCEENIDACEESIREHESSIEEIRKTKGGLEKEIHESDSF 1018
Query: 1032 IAN-QSLEEI-DLKNNLT----------LLEKKEAVAKLNEELKLSEIMISDLTKYHHTL 1079
+AN + E I L+ N+ + E +A + +E+ + D+ + L
Sbjct: 1019 LANLRDNERIRKLRKNIAENKEKIEAFDMEEAAKARRQFDEKYAAEKKREGDMEAEYSRL 1078
Query: 1080 ENCV------IKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
+ +K + + + ++Y ++ ++K+S++ +DL KY L+N ++KYH
Sbjct: 1079 GGELSSLKDQLKVLEKDLSEFKDVTKQYTDQLIKVKMSDMANNDLEKYAKALDNAIMKYH 1138
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRV------------- 1180
S KM +N +R W + YQG DID I I +DV G+ KR +YNYRV
Sbjct: 1139 SLKMEEVNDTMRHLWNKTYQGTDIDGIKIRSDVEGGASKR-SYNYRVGSLSYSPHMPFMR 1197
Query: 1181 ----VQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID 1236
V K+ +E DMR RCSAGQ++LA +IIRL +SD
Sbjct: 1198 TEKVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSD----------------------- 1234
Query: 1237 RAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN-----AS---------DQKNFQ 1282
+F +NCGI ALDEPT LD++N AS + NFQ
Sbjct: 1235 ----------------SFGQNCGILALDEPTNALDVENIDALAASLVDIINERKNHANFQ 1278
Query: 1283 LIVITHDEEFIENLTAID-RAYVVRIVRDHK 1312
LI+ITHDE F+ L + Y R+ RD +
Sbjct: 1279 LIIITHDENFLRKLGQANVMEYYWRVSRDSR 1309
>gi|395331066|gb|EJF63448.1| hypothetical protein DICSQDRAFT_83114 [Dichomitus squalens LYAD-421
SS1]
Length = 1308
Score = 307 bits (787), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 363/1413 (25%), Positives = 632/1413 (44%), Gaps = 217/1413 (15%)
Query: 1 MALLDQLHIMGIRNFPADKN-RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
MA L++L I GIR+F DKN V+ F P+T+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MAHLNKLAIRGIRSFD-DKNIAVIEFFSPVTVIVGHNGSGKTTIIECLKYATTGDQPPNT 59
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
G F+HDP++ + E A VKL+ N + VR+L
Sbjct: 60 RGGA---------------------FIHDPKMANEKEVKAQVKLRFYAANGARMLAVRNL 98
Query: 120 LLS-NKNGKDNCATRDTTISRKIFATGVQKNLG--------CLQQESVLEMCNLIGVSKA 170
++ KNG T ++ + A V+K G C + ++ E+ +L+GVSKA
Sbjct: 99 SVTMKKNGALTMKTLESILG---LAENVEKGSGKRGVISTKCAEMDT--EIPHLLGVSKA 153
Query: 171 ILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRLRKEIPEIKA 229
+L NVIFCHQE+S WPL E +K+ FD+IF+ATKY KAL++IK +++DR + E+KA
Sbjct: 154 VLENVIFCHQEDSYWPLSEPAALKKKFDDIFEATKYTKALDNIKALRKDR----VAELKA 209
Query: 230 ---HYQATLNYKKEADSKKQLIYNNTQK---RDQSFEELHNIEESMKPINEKLVQLTEKE 283
++ K AD K I K R +EEL + N+ L K
Sbjct: 210 ETERLESLAREKGHADKLKDRITEMNDKIAARTAEYEELKAAYDQQVRSNQILNDTGSKF 269
Query: 284 RNMSVMSTQYQTKKT----ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEK 339
R + V Q +K E ++ +E+ E+E + +L AE + + +N +K
Sbjct: 270 REIYVKVDQLNQRKDQYKEELNLAKENLQEIEGTDDEL-----AERVRTHDDYILNQKQK 324
Query: 340 CSELENQERLKSQYIQEEKQSHTHINEAQMKL---------GKLERDEETHKKLNDTLKT 390
E + I+ + SH + Q +L LERDE H
Sbjct: 325 RKTQEGRLEDAEDAIRAARASHVELMSKQGELLAEERLVDQRMLERDELIH--------- 375
Query: 391 KLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDN----ENTK 446
+LA + +S EE + I L+D+K + +D T+
Sbjct: 376 ---DLAARFHIKGFEQSSIKREEAQQFIAA--------LNDVKRRQHAETDRLQVESRTR 424
Query: 447 QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN 506
E N + +L + ++ KQ+ ++ ++ + +I + + L ++L +
Sbjct: 425 NEEYN---FKSRQLHTDLEGHKQERRSLRERVSTLQGRITGAEREVDAARALTSRLAELK 481
Query: 507 SEIDQ----LSKS---LDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEI 559
++I++ L+++ +++I + Q +L + ++ E+ L Q + A++
Sbjct: 482 ADIEEKRNRLARAREEFASAGFEDKIREAVSQSAKLNERRDDLNDELRTLSLQADSRAKL 541
Query: 560 KSLKNRKESKLADINLLKERHDRAFHLLF--DMIPEENFKNSLDKALSSITFDINRIQED 617
+ + + ++K +I + + F L D PE N + LD+A + + ++
Sbjct: 542 ELQRTQLKAKTGEIKTTIDLCNAKFRKLVGVDARPE-NMEQELDRAALEKEREQSELEVQ 600
Query: 618 INAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPF----EDELDRVTLEL 673
+ K+L +A++SN +R ++ + L R++ L + ED +D T E+
Sbjct: 601 SSNASKNLQAAQASLSNLRAQVRAKQDEIKNLDKRIQAGLKEGEYDGSVEDAIDGATKEI 660
Query: 674 KREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPE 733
E++ + ++ ++ K ++ CPLC R + N ++ K P+
Sbjct: 661 GIRNEDLGKSAGSHDVYERFL-KTGRSKKCCPLCVRGLDDREMATFEKNIMEALKKSTPQ 719
Query: 734 QTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKK 793
+ + + + LQ+L + + +Q ++PSL K I+++E I +
Sbjct: 720 AIKELQKELQDWESELKRLQDLAVLSASKNNVQTAELPSL-EKQIKVKEAEIPALTTEAE 778
Query: 794 LKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVL 853
A +++ ++ ++ Q+ ++ Q++++R + I+ + S V
Sbjct: 779 EAAAKLAEVSRDLK------EIAVMRQHAVSVSKAQKDIQRLKQDIAALESDLVATGSTK 832
Query: 854 AQQKEKKNELNTFRSKIESGQTR----LNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLK 909
+ + EL+ + ++++ R + K L++ + D+H K+L L+
Sbjct: 833 TAD-DVQRELDQVKDELKASDRRKDNLIQDREGKNAVLRQLEADLHKKELEESECRNQLR 891
Query: 910 S---LEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGA 966
LE R E++ + Q L++L K+A AQ ++ L++EHK+ E A
Sbjct: 892 DKDELERRIEEMKAEIATAQIRLKDLDTKIAE-------AQEPIEKLEREHKELERELNA 944
Query: 967 KIQDYTKQLEEVK--RIKLEILN-YTKRGTLTQLAA-LRESVQKLNQRK----------E 1012
KI K +E+ KLE N + R + ++ +RE + +++++ E
Sbjct: 945 KILQAQKASQELNMGADKLESQNKWLYRNSKEKIGQRVRELNELIDEKELEVREQALTLE 1004
Query: 1013 DIIAKRGVCERTINEINQSIAN--QSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMIS 1070
I AK G ++ I+E ++AN +++ LK +L E + + E K I
Sbjct: 1005 QIRAKLGDIDKEISEAAVTLANLRENIRFRRLKRDLAATEAELDAIDMEEAAKAKRIWTE 1064
Query: 1071 DL-----------TKYHH-----TLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIM 1114
TKY H + +K M + ++Y ++ ++K+S+++
Sbjct: 1065 KWNVEKQKETELQTKYAHIGGEVSSLKAQLKTLEGDMADFKNVNKKYRDQLIKVKMSDMV 1124
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRR 1174
+DL KY L+N ++KYHS KM +N +R W + YQG DID I I +D G+ KR
Sbjct: 1125 NNDLEKYAKALDNAIMKYHSLKMEELNDTMRHLWNKTYQGTDIDGIKICSDSEGGATKR- 1183
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTA 1234
+YNYRVV K+ +E DMR RCSAGQ++LA +IIRL
Sbjct: 1184 SYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRL------------------------- 1218
Query: 1235 IDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN-----AS---------DQKN 1280
ALA++F +NCGI ALDEPT LD +N AS D N
Sbjct: 1219 --------------ALADSFGQNCGILALDEPTNALDTENIDALAASLVDIINERRDHAN 1264
Query: 1281 FQLIVITHDEEFIENLTAID-RAYVVRIVRDHK 1312
FQL++ITHDE F+ L + Y R+ RD +
Sbjct: 1265 FQLVIITHDENFLRKLGQSNVMEYYWRVSRDSR 1297
>gi|392574394|gb|EIW67530.1| hypothetical protein TREMEDRAFT_33359 [Tremella mesenterica DSM 1558]
Length = 1312
Score = 299 bits (765), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 375/1416 (26%), Positives = 640/1416 (45%), Gaps = 224/1416 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L I GIR+F +V+ F PLT+IVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MASLNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTTIIECLKYATTGEMPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A V+L+ N + R++
Sbjct: 61 GGA---------------------FIHDPKMANEKEVKAQVRLRFWNVNRQRMTATRNVQ 99
Query: 121 LS-NKNGKDNCATRDTTISRKIFATGVQK----NLGCLQQESVLEMCNLIGVSKAILNNV 175
++ K G T + +++ G K + C + + L + L+GVSKAIL NV
Sbjct: 100 VTVKKTGGLTMKTLEGILAKTDENGGEGKRNTISTKCSEMDEELPL--LLGVSKAILENV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKE-IPEIKAHYQAT 234
IFCHQE+SSWPL + +K+ FDEIF+AT+Y KAL++IK +RKE E+K +
Sbjct: 158 IFCHQEDSSWPLSDASSLKKRFDEIFEATRYTKALDNIKA----IRKERTAELKVDKE-R 212
Query: 235 LNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
LN+ K +K + + +K + EE +E ++ + EK ++ + ++ +Q
Sbjct: 213 LNFLKADKNKAERMRAELKK---AIEEEQEKQEEVERLREKFEEIKQVNMQYYAEASGFQ 269
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKI--NLDEKCSELENQERLKSQ 352
+K E + ++ N LE + ++ G K +S L ++ N D+ LE ++ +
Sbjct: 270 SKFQEAENLKIRKNMLEKNQQRTLEGMKEMTESTKELLEMIANFDQHLKSLEGRKMRLVE 329
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKKLND-TLKTKLNNLADTLCLDTTAKSQYTP 411
+E+ S + + L + ++K+ + LK + + + + A Y+P
Sbjct: 330 SRDKEEASMEELRRRERNLASTQGGLIANRKIYERNLKERELAVREAAKIHNYAGYDYSP 389
Query: 412 EEGEGLIKMSQTTID---KYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFK 468
E +++ D + ++ K ++ + E Q E++ L + E + KS +
Sbjct: 390 LEENKIVEFIDILHDLVRRAETEQKKVQMDGARKERDLQRELDRLAAARTETMATKKSKQ 449
Query: 469 QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAW 528
I +++ Q V+ +++L+ KL +E +++ L+ D ++ +
Sbjct: 450 DHIVKFNENIRTKEAQFESVSSVNVEVELLEGKL----AEAEEVRARLENDISESRYDET 505
Query: 529 IRQRN----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
IR+++ + E + I+AE++IL Q+ + A++ +N +SK + + H F
Sbjct: 506 IREKSLAIRQKETDRDKINAELAILNRQSDSRAQLSIKRNELQSKSSQVIASVASHSAKF 565
Query: 585 HLLF----------------------DMIPEENFKNSLDKALSSITFDINRIQEDINAKE 622
L +++ E ++ ++ LS + IN + + K
Sbjct: 566 KELVGTDLEAESMEEKITLSAGRRDRELVEAEAAASASNRTLSQLQTSINIAKSTLATKR 625
Query: 623 KHLYTLE----ANVSNSSKTLRDQKRTLAELMD--RMELVLGSKPFEDELDRVTLELKRE 676
L LE A +S SSK+ ++ + AE R + +L + ++ ++ LE+ +
Sbjct: 626 DELRRLEQAIEAGLSESSKSTIEEAISEAEEELEYRQKNLLNADAMKEHWAKM-LEVGKT 684
Query: 677 QEEV-----SMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEI 731
+ + S++ S + F Y+ L + F S GL KE+
Sbjct: 685 KHKCLGCDRSLLASDEKAFEKYV----------QLQLKRF----STAGL--------KEM 722
Query: 732 PEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGEL 791
E+ K +D+L K Q S +K + E I+ +T I +L + +E V ETK +
Sbjct: 723 QEEEEGWKLELDKLRKLQPSELTVKELKEQIIPTLETQISDESKRLEKEQEEVEETKVRV 782
Query: 792 KKLKTA---LETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVD 848
K K L+T K + G+ L+ +++ L +R+LE SG T
Sbjct: 783 GKAKLVVRDLQTLKNAASMISRILGETKDLENDVKRL---ERDLES-----SGSLKT--- 831
Query: 849 LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNE-KLQSLQKQKNDIHSKQLTVQGGAGM 907
+++V + + NE+ T + + Q L+S E KL SL+ Q++DI K L + G
Sbjct: 832 VEEVQGEVERVTNEIKTLQRE----QQTLSSEKELKLNSLRSQQDDITRKTLRLNQLKGQ 887
Query: 908 LKSLEDRKCEL-EGMDSV--YQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEE 964
+ E + L E D V Q EL+EL + L + E + N+
Sbjct: 888 QERREREEAALKELQDQVIALQAELKELDTAAQAADAPWREMNDTLSRHRVERQNAENDA 947
Query: 965 GAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAK---RGVC 1021
G + Y L E++ + Y G ++ RE+ ++++ K D+I+ R
Sbjct: 948 GLNVGMYQSSLHELEGKHRACVTYVAEGNDRRM---RENEAQIDEIKRDLISASETRSSL 1004
Query: 1022 ERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK---LSEIMISDL---TKY 1075
E I+++ ++ Q + ++ N+T E+ + K+ E+L+ L ++ S TKY
Sbjct: 1005 ETQISKVQDELSRQGAVKSNINANITYREQAREIDKVQEDLEAIDLEQMAKSRREFNTKY 1064
Query: 1076 HHTLEN---------------CVIKYHSQKM--------RSINRLIREYWTRIYQLKLSE 1112
LE I + +K+ ++++RL R+ ++ + K+SE
Sbjct: 1065 SAKLEEETKVQNSWQRAQGLLVGINQNREKLEKTLEEDYKNVDRLFRD---QLIKTKVSE 1121
Query: 1113 IMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD--VGTGS 1170
+DL KY L+N +++YHS KM IN L+ W +YQG DID I I +D + +
Sbjct: 1122 TANNDLEKYGKALDNAILRYHSIKMDEINSLLAHLWGIVYQGTDIDCIKIMSDHDEASST 1181
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIE 1230
R++YNYRVV KN +E DMR RCSAGQ+VLA +IIRL
Sbjct: 1182 STRKSYNYRVVMVKNDVELDMRGRCSAGQKVLASIIIRL--------------------- 1220
Query: 1231 NLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD---------------IKNA 1275
ALAE+F + CG+ ALDEPTTNLD I+
Sbjct: 1221 ------------------ALAESFGQGCGVLALDEPTTNLDAYENINSLAEALAEIIRER 1262
Query: 1276 SDQKNFQLIVITHDEEFIENLTAID-RAYVVRIVRD 1310
Q NFQL+VITHDE F++ L A D Y R+ RD
Sbjct: 1263 RRQANFQLVVITHDEAFLQRLAAHDVLEYYWRVSRD 1298
>gi|113913515|gb|ABI48901.1| RAD50 [Saccharomyces pastorianus]
Length = 1312
Score = 293 bits (750), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 350/1363 (25%), Positives = 621/1363 (45%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P +
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP+I + + A VKL T N + V R++
Sbjct: 61 GGV---------------------FIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L K T + + I +G + L E ++ +GV KAIL VIFCHQ
Sbjct: 100 LLMKKTTATFKTLEGQLV-AINNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYKK 239
E+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 159 EDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLKL 214
Query: 240 EADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ D K + N Q K DQ E+ IE + I E+ +L + ++ + ++ +
Sbjct: 215 DKDRSKAMKLNIHQLQSKIDQFNAEVSQIEAQLNEITEQSDKLFKSNQDFQKILSKVENL 274
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
K + I++ L +SI ++ K +L++ L F L EK +L++ E S +
Sbjct: 275 KNSKTSIRDQVERLSNSI-EILDLSKMDLKNLLANFSKVLTEKNHQLKDLEMNISNLKNQ 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
+ H N + G+LE +E ++K L++LA +L D + Q+ +
Sbjct: 334 QSSLQNHSNSLIRRQGELEARKEAYEK-------NLSHLA-SLKEDFQQRFQHLSDNNNS 385
Query: 417 -LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF---KQQIE 472
++K +Q +S ++ R F D NT + +++++ + +KS Q +E
Sbjct: 386 DMVKTNQE-----MSQFQV--RIFQDLSNTAEQFAKEILIKETNVSELVKSITVDSQNLE 438
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAW---- 528
NKKD T +I E+ + L+ L T+ + +N E++ L + K +++AW
Sbjct: 439 YNKKDRTKLIHDTEELTEEVRLLKNLSTQ-DDLNHELENL------NTYKGKLQAWENDN 491
Query: 529 --------IRQRNELEDELCVIDAEISILQAQNIT----------LAEIKSLKNRKESKL 570
I ++N +E+ +++ +I Q + + L ++ N K L
Sbjct: 492 TIPKLTQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLVRKSLNVKSGDL 548
Query: 571 ADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+I + K + D +F + ++F+ S D + IN +Q++I K ++ +
Sbjct: 549 QNI-IEKLQKDPKIRQIFPIT--QDFQKS-DLEIDFQKLFIN-MQKNIAVNNKEIHEFDR 603
Query: 631 NVSNS-------SKTLRD----QKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEE 679
+N+ K L D Q++ + L + + + D L+ L K E
Sbjct: 604 KYTNALYNSNTIEKDLHDNLHSQQKVIQLLNENLPEDCTIDEYNDVLEETELSYKTALEN 663
Query: 680 VSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKI-----KEIPEQ 734
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK K + E
Sbjct: 664 LKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKTDANFEKTLKET 722
Query: 735 TNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKL 794
N+K ++D L ++ + L + + I Q+ L + +E +K +L L
Sbjct: 723 VQNEKEYLDSLRLLEKHIISLNSLCQKIENAQEA--------LDKAKEETKASKTKLDLL 774
Query: 795 KTALETPKTKEKTALS----LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+T T K +++ A S L L++ ++EL T+ EL + G+++
Sbjct: 775 ETKSTTLKNEKEFAESEIRPLIEKFIYLEREVKELEHSSKTISDELSIYNTSEDGIKT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+L V
Sbjct: 833 --VDELRDQQRKMNDSLRELRKNISDLQME---KDEKVRENSRMINLIKEKELNVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S++ +K ++ +DS +E L ++ ++ + N AQ+ LD K E
Sbjct: 888 SLTRKQNIDNSIKLKKANIKDIDS----RIEALESQIISLQNKKNEAQNVLDITKNERDL 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++N + + D + ++ + I E +++ RG L+++V +L K + +
Sbjct: 944 QINNKQKIVADVNRLIDRFQTIHNEAIDFESRG----FNELQKTVIELESNKVQMKELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ +NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDSRLNEMNEEKRKLADSNNEEKNLKQNLELIELKSQLHNIEAEINELDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ + +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTNFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDVEKSYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+V+A +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVIASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|449432386|ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
Length = 1316
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 355/1406 (25%), Positives = 656/1406 (46%), Gaps = 237/1406 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F+HDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHSFIHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ TG + L + E+ L+GVSKA+L NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVFQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLNYK 238
Q+ ++WPL + +K+ FD+IF AT+Y KALE I K+ +D+ EI K + K
Sbjct: 160 QDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAH-EIKTYKLKLENLQTLK 218
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
A ++ I + +K + ++ +E++++ ++ K+ +++ + Q TK
Sbjct: 219 DAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTA 278
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKIN---LDEKCSELE---NQERLKSQ 352
ER + + + +++ + EL+ F+ L+ K S+LE N KS
Sbjct: 279 ERSTLYKEQQKQYAALSEENEDTDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSS 338
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPE 412
++++ INE ++ KL+ + E H L + + + L L + + ++ E
Sbjct: 339 FLKQA------INEYIWEISKLQTEAEVHMSLKNERDSTIEELFARHNLGSVPNTPFSDE 392
Query: 413 EGEGL---IKMSQTTIDKYLSDIKI-----LERTFS------------DNENTKQAEINA 452
L IK+ +DK + D ++ L+ + D + +A+I
Sbjct: 393 VASNLTNRIKLRLVDLDKDMQDKRLSNDVELKTAWDCYMDANDRWKNIDAQKHAKADIKR 452
Query: 453 LIVEKV-ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ 511
I++++ E ES+ SF+ QI ++ +++ + +Q+ V + +Q
Sbjct: 453 GIMKRIEEKESERDSFELQISH---------VDLSHIDEREKNMQI------EVERKTNQ 497
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLA 571
L+ + E E+ IRQ+ + +L I+ +I + + +A + + K A
Sbjct: 498 LA--------EREFESTIRQK---QSDLYGIEQKIKAVNREKDIMAGDSEDRVKLALKKA 546
Query: 572 DINLLKERHDRAFHLLFDMI---------PEENFKNSLDKALSSITFDINRI-------Q 615
+++ K++H + D I PE++ K + +AL ++ + + + +
Sbjct: 547 ELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEYDDLNSKSREAE 606
Query: 616 EDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKR 675
+D+N + + + N+S K + +KR + + ++ + F +L LE +
Sbjct: 607 KDVNMLQMKIQEVNHNLSRYQKEMESRKRFVESKLQSLDPL----SFSVDLYLKALEGAK 662
Query: 676 EQEEV-----SMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTK--- 727
E+++V ++ + +F+ + ++ CP C R F ++ V K + K
Sbjct: 663 EKKDVQKSKYNIADGMRQMFDPF-ERVARAHHVCPCCERPFTAEEE-DEFVKKQRVKAAS 720
Query: 728 ----IKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEEN 783
+K + ++++ +H QL K L+ V+E +KL + IP+ +L +L E
Sbjct: 721 SAEHMKVLAVESSSSDSHFQQLDK-------LRMVFEEYVKLSNETIPNAEKELHQLNEE 773
Query: 784 VIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+ E L + L K + +L + D+ +E+ TLQ++++ K+ R
Sbjct: 774 LDEKSQALDDVVGVLAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLD-FR 832
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHN--EKLQSLQK-QKNDIHSKQLT 900
GV +E ++ELNT ++ T+ HN EKL+ Q+ +ND+ + Q+
Sbjct: 833 GKGV------KTLEEIQSELNTLQN------TKDGLHNELEKLRDEQRYMENDLANIQIR 880
Query: 901 VQG-------GAGMLKSLEDRKCELEGM-DSVYQTELEE--LGRKVAPIETQLNLAQSEL 950
A L+ + + EL+ + + Q +L+E L + P+ + + ++
Sbjct: 881 WHTLREEKVKAANTLRDVRKAEEELDRLTEEKGQVDLDEKHLAEALIPLSKEKDKLLNDY 940
Query: 951 DALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY--TKRG----TLTQLAALRES- 1003
+ LK + ++ E G K + + +++E + R +I Y K+G L + A ES
Sbjct: 941 NELKDKLNREYEELGDKKRKFQQEVETLLRTTSKIKEYLDLKKGERLKELQEKKAQAESQ 1000
Query: 1004 VQKLNQRKEDIIA---------------KRGV--------CERTINEINQSIANQSLEEI 1040
+Q + RK++I+A +R + + ++E+ + I +SLEE
Sbjct: 1001 LQGCDSRKQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELARDI--ESLEEQ 1058
Query: 1041 DLK-NNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTL--------ENCVIKYHSQKM 1091
LK ++ +E + + KL++E E ++S+L ++H T+ +N + H Q
Sbjct: 1059 ILKIGGVSTVEAE--IGKLSQE---RERLLSELNRFHGTMSVYQSNISKNKIDLKHVQ-Y 1112
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+ I+ + Y+ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W +
Sbjct: 1113 KDID---KRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQT 1169
Query: 1152 YQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
Y+G DIDYISI +D G G+ R+Y+YRV+ + E +MR RCSAGQ+VLA LIIRL
Sbjct: 1170 YRGQDIDYISIHSDSEGAGT---RSYSYRVLMQTGDAELEMRGRCSAGQKVLASLIIRLA 1226
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAID----RAYVVRIVRDHKALAETFSRNCGIFALDEP 1266
+++ ++ DE NL + A ++RI+ D K
Sbjct: 1227 LAETFCLNCGILALDEPTT-NLDGPNAESLAAALLRIMEDRKG----------------- 1268
Query: 1267 TTNLDIKNASDQKNFQLIVITHDEEF 1292
Q+NFQLIVITHDE F
Sbjct: 1269 -----------QENFQLIVITHDERF 1283
>gi|54038573|gb|AAH84223.1| LOC495064 protein, partial [Xenopus laevis]
Length = 724
Score = 291 bits (744), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 216/746 (28%), Positives = 390/746 (52%), Gaps = 47/746 (6%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DKN+ V++F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIQGVRSFGIEDKNKQVIQFFTPLTVLVGPNGAGKTTIIECLKYITTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S GK FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------SKGKTFVHDPKVAHETDVRAQIRLQLKDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K T + I+R V + C + + EM + +GVS A+LNNVIFC
Sbjct: 100 MICTQKGKSTEFKTLEGVITRIKHGEKVSLSTKCAEMDK--EMISALGVSAAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EG+++K FDEIF AT+Y KALE++K R + + E YQ + Y
Sbjct: 158 HQEDSNWPLSEGRQLKVKFDEIFSATRYIKALETLKKVRTQQAHNVRE----YQVEIKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQ----SFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K + I +N Q +++ S E + +IE ++P+ ++L + +RN+S VM
Sbjct: 214 KQNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPLKDRLADI---QRNLSKVMRLDN 270
Query: 294 QTKKTE---RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLK 350
+ K E R M Q++ +LE ++++F G EL + ++ EK +L +Q+R
Sbjct: 271 EIKALESRKRTMEQDN-QDLEEKMEKVFQGTDEELNGMYQNHQRSVREKERKLNDQQREM 329
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ +E ++ + E ++ G+L+ + + H++ T + + +LA L LD ++ +
Sbjct: 330 DRACKESQRLNREKGELLVQQGRLQLEADHHQQYIKTRDSLIKSLAAQLELDGFERTPFN 389
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
+ + + +K + + R FS+ E KQ +++ + +K LE I+ K
Sbjct: 390 QRQTSNFQMLVKERQEKDEAHANQILREFSEREAMKQRQLDEMRDKKTGLERTIE-LKSS 448
Query: 471 IEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
+ K DL NV ++ ++ S LQ L +L + E++ + KS + + L+ E+
Sbjct: 449 TQSKKHTDLKNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVLQLQ 508
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFD 589
Q++EL+ + +D E+ + +T ++ LK K K I +K RH+ LL
Sbjct: 509 NQKSELDRNVRKLDQEMEQMNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDELSLLLG 568
Query: 590 MIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAEL 649
P K L+ L S DIN+ ++ + K L E N ++ S LR ++ A
Sbjct: 569 YFPN---KKQLEDWLYSKRKDINQTRDKLARLTKELVAAEQNKNHLSNELRRKEEQSASF 625
Query: 650 MDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCT 708
+++ V GS+ F+ +L R+ ++++ ++ +M+ ++ +I L EEN+P CP+C
Sbjct: 626 EEKVFDVCGSQDFDSDLSRLQDDIEKTSKQRAMLAGATAVYTQFITTLTEENQPCCPVCQ 685
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQ 734
R F S+ + ++N +++K++ +P++
Sbjct: 686 RIFPSEAELQDVINDMQSKLRLVPDK 711
>gi|151944297|gb|EDN62575.1| Mre11-Rad50-Xrs2 protein complex member [Saccharomyces cerevisiae
YJM789]
Length = 1312
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 346/1360 (25%), Positives = 634/1360 (46%), Gaps = 204/1360 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNNLSSLKEAFQHKFQGLSNIENNDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQIFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ ++M +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVM---QLLSENLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIGNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML---KSLEDR-KCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLN 962
L ++++D + + E ++ + + ++EL ++ ++ + + AQS LD +K E ++
Sbjct: 888 SLTQKQNIDDSIRSKRENINDI-NSRVKELEARIISLKNKKDEAQSVLDKVKNERDIQVR 946
Query: 963 EEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCE 1022
+ + D + ++ + I E++++ +G L+ ++++L K ++ + +
Sbjct: 947 NKQKTVADVNRLIDRFQTIYNEVVDFQAKG----FDELQTTIKELELNKAQMLELKEQLD 1002
Query: 1023 RTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTL 1079
NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ + +
Sbjct: 1003 LKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDKYQE 1062
Query: 1080 ENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKLSEI 1113
E+ ++ +K+ S N + + Y +L+
Sbjct: 1063 ESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQTRSF 1122
Query: 1114 MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKR 1173
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + + K
Sbjct: 1123 VTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTVKG 1182
Query: 1174 RTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------------------- 1213
++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1183 KSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTNLDE 1242
Query: 1214 -------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1243 ENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|349580699|dbj|GAA25858.1| K7_Rad50p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1312
Score = 287 bits (735), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 347/1363 (25%), Positives = 630/1363 (46%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSSLKEAFQHKFQGLSNIENSDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ ++M +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVM---QLLSKNLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S+ ++ + +DS ++EL ++ ++ + + AQS LD +K E
Sbjct: 888 SLTQKQNIDDSIRSKRENINDIDS----RVKELEARIISLKNKKDEAQSVLDKVKNERDI 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++ + + D + ++ + I E++++ +G L+ ++++L K ++ +
Sbjct: 944 QVRNKQKTVADVNRLIDRFQTIYNEVVDFEAKG----FDELQTTIKELELNKAQMLELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDLKSNELNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|169621967|ref|XP_001804393.1| hypothetical protein SNOG_14194 [Phaeosphaeria nodorum SN15]
gi|160704664|gb|EAT78431.2| hypothetical protein SNOG_14194 [Phaeosphaeria nodorum SN15]
Length = 1299
Score = 286 bits (732), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 333/1364 (24%), Positives = 615/1364 (45%), Gaps = 157/1364 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I GIR+F ++ ++F PLTLIVG NG GKTTIIEC+++A T + P
Sbjct: 1 MSRIDRLMIQGIRSFGPERGETIKFDPPLTLIVGWNGSGKTTIIECLRYATTGDLP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+ +G F+HDP++ + E A VKL + + RS+
Sbjct: 57 ----------------PHSKTGGAFLHDPKLQDEKEIMAQVKLSFRSTSGVRMVATRSMQ 100
Query: 121 LS-NKNGKDNCATRDTTISRKIFAT-GVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ K G+ + + +K + + L Q + +GV KAIL+NVIFC
Sbjct: 101 VTVKKTGRSQKTLEGSLLMKKDTENHSISTRVAELDQI----IPQYLGVPKAILDNVIFC 156
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL + +K+ FDEIF+A KY KA+++IK+ R ++ ++K +
Sbjct: 157 HQEDSTWPLSDATTLKKKFDEIFEAMKYTKAIDNIKMIRKNRNIQLGQLKI-------IE 209
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY----- 293
A K + + ++ + ++ + + + I+E++ + EK R S +Y
Sbjct: 210 GHAKEDKSRAFKSQTRQAELYDAIETLRKEYVVIDEEVTEAQEKAREAYDHSVRYSRIVN 269
Query: 294 --QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ K+T D ++S LE ++ + D ELQS L+ +K ++ ++ + +
Sbjct: 270 DLEFKRTTFDANKQSVAALEDNLTHMAESDD-ELQSMLDQYKQRVETYATQNDEHRHEYA 328
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKK---LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + + Q ++GK E +E + + +TL + D D +
Sbjct: 329 DLKDALEVTRESLGVKQSEIGKYEAQKEQYDRQLVQRETLIKEAAKRHDIRGYDYDITDK 388
Query: 409 YTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENT---KQAEINALIVEKVELESKIK 465
+ + L KMS+ + LER +++ Q ++N L K +
Sbjct: 389 QVADFKQILSKMSR-------DQNRALERARQESQKDLKEAQDDLNQLNTRKSGASQSKE 441
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
S + QI N K ++++ + ++ + + VLQ K ++ S + ++ + +
Sbjct: 442 SARSQIANNDKRISDLQKAMVQIKADEGSEVVLQDKKRDTEEQLQNASAASSSERYEERV 501
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
+ LED+ + E+ Q A I +N +S + +K+ H+
Sbjct: 502 QEASNNMRTLEDKKERLTNELGEATKQAKESASIDYARNELQSAQHSLTTMKKVHNERIS 561
Query: 586 LLFD-----MIPEENFKNSLDKALSSITFDINR---IQEDINAKEKHLYTLEANVSNSSK 637
L D E +++ +L + S + +R Q ++ L +LE+ +
Sbjct: 562 ELVDSDWDPATLETSYQQTLSEKASKVKEATSRRDISQSKLDKINFQLSSLESQLKKKRS 621
Query: 638 TLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS-YIGK 696
LR ++T+ + + R ++ F + L+ +L+ + E VS + ++ N+ Y+
Sbjct: 622 ELRQYEQTVTKAIQRDDI----SDFNETLE----QLEADYEGVS-TDAAKFAANAEYMRS 672
Query: 697 LEENEPR---CPLCTRFFESD----YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ 749
E+ + C LC R D +++ G +KL++ I + + +Q
Sbjct: 673 CLESARKHNVCRLCERELHDDRSQKFTIEGFYSKLESIIAKAESAMKGENPEELLEELEQ 732
Query: 750 RSLQELKPVYENIMKLQDTDIPSLR---SKLIELEENVIETKGELKKLKTALETPKTK-E 805
+ KP YE ++L+DT+IP+L+ SKL ENV + + + LE + + E
Sbjct: 733 --ARNAKPSYELALRLRDTEIPALQIDMSKLTSERENVNKQLEDQDSIVHELEAERQEVE 790
Query: 806 KTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNT 865
+ +Q + ++ + EL ++L Q+ K +G+ S G+D V + K ++
Sbjct: 791 SMSKEVQSIVGYYNK-VHELEVQIKDLA-QKQKTAGL-SRGIDA--VQSDLKTITDDSRN 845
Query: 866 FRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVY 925
R+ +E + + SL+ DI+++ Q ++L R E + ++
Sbjct: 846 ARNVLEQLTAARDKSRNHITSLELSVRDINAELNNAQSKLKEKRALGARIEEFKTENNKQ 905
Query: 926 QTELEELGRKVAPIETQLNLAQSELDALKK---EHKKKLNEEGAKIQDYTKQLEEVKRIK 982
+ + + + + ++ AQ + D + + E ++ ++E +K+ D +QL +
Sbjct: 906 RELIRGYDKDIEGLVPEIEQAQYKYDDINRRGNERVQRAHDEASKLSDSLRQLSQADE-- 963
Query: 983 LEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDL 1042
EI Y +RG QLA ++ L + ++ R I +I S+ + + + +
Sbjct: 964 -EITAYIQRGGPEQLARTHREIENLQGDLARVESEMMDVMRKIKKIEDSVRDVEMTKRSI 1022
Query: 1043 KNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE--NCVIKYHS------------ 1088
+NL + K ++ L +++ E ++ + H+T E + +YHS
Sbjct: 1023 SDNLRYRKAKRSLETLQADIEKLEAHGAERDQAHYTREAKHWDDQYHSLNTTKTSIERDM 1082
Query: 1089 -QKMRSINRLIREYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQ 1135
K + L++EY IYQ ++ ++ I DL +Y L+ +++YH+
Sbjct: 1083 KNKDDQLTELMKEYED-IYQNADHQYKEAHLKVETTKAAIEDLGRYAGALDKAIMQYHTL 1141
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
KM INR+I E WT YQG D+D I IA+D G G+ R YNYRVV K E DMR R
Sbjct: 1142 KMEEINRIIAELWTNAYQGTDVDTIRIASDSDGKGN---RQYNYRVVMSKQDTEMDMRGR 1198
Query: 1195 CSAGQRVLACLIIRLFISD--QKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAE 1252
CSAGQ+VLACL+IRL +++ N LI + E T +D+ + K LAE
Sbjct: 1199 CSAGQKVLACLVIRLALAECFGTNCGLIALD------EPTTNLDQQNI-------KGLAE 1245
Query: 1253 TFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENL 1296
+ S+ +D++ Q NFQL+VITHDE F+ +
Sbjct: 1246 SLSQ------------IIDMRRK--QSNFQLVVITHDETFLSAM 1275
>gi|396481312|ref|XP_003841209.1| similar to DNA repair protein rad50 [Leptosphaeria maculans JN3]
gi|312217783|emb|CBX97730.1| similar to DNA repair protein rad50 [Leptosphaeria maculans JN3]
Length = 1321
Score = 286 bits (732), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 347/1379 (25%), Positives = 635/1379 (46%), Gaps = 179/1379 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ ++++ I GIR+F +K V+ F PLTLIVG NG GKTTIIE +K+A T + P
Sbjct: 1 MSKIERMMIQGIRSFGPEKAEVIIFTAPLTLIVGWNGSGKTTIIESLKYATTGDLP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
A++ + F+HDP++ + E A VKL + + R+L
Sbjct: 57 ----------------ANSKTQGAFIHDPKLCNEKEVLAQVKLSFRSTSGVRMVATRNLQ 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
++ K + T + ++ + G + ++ E + +GVSKAIL+NVIFCHQ
Sbjct: 101 VTVKKSVRSQKTLEGSLL--MIKDGEKHSISTRVAELDQIIPQYLGVSKAILDNVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
E+S WPL + +K+ FDEIF+A KY KA+E+IK+ R E+ ++K +
Sbjct: 159 EDSLWPLSDPGTLKKKFDEIFEALKYTKAIENIKLIRKDRNIELGQLKI-------IEAN 211
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS----------VMS 290
A K + +++ + ++E+ + ++ ++ + E +R S +
Sbjct: 212 AKEDKTRAAKSEKRQAELYDEIEGLRKTYATVD---AECDEAQREASQAYNHAARFEQIV 268
Query: 291 TQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLK 350
Q Q K+ Q+S L+ ++K++ D ELQ L+ ++ + S+ L+
Sbjct: 269 AQLQAKRITFQANQDSVAALQDNLKEMAESDD-ELQDMLDQYEARVATYASQ---STELR 324
Query: 351 SQY--IQ---EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTA 405
QY IQ EEK++ + Q ++GK E +E H + ++ + N + + TA
Sbjct: 325 QQYSNIQHNLEEKRA--ALGAKQNEIGKYEAQKEQHDR---QIQQRENTIKE------TA 373
Query: 406 KSQ----YTPEEGEGLIKMSQTTIDKYLSDI-KILERTFSDNE---NTKQAEINALIVEK 457
K Y E + + Q + K D K L+R + + T Q E+NAL K
Sbjct: 374 KRHGIRGYDYEIADKQVTEFQQILSKMSKDQNKALDRVREETQRELRTAQDELNALNTRK 433
Query: 458 VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEI-DQLSKSL 516
L + +S + QI N + + ++ +N+++ + + +LQ K + V ++ + L+ +
Sbjct: 434 SGLAQRKESAQTQIVSNDRRILDLQRSMNQISADEGSEAILQDKKHEVEQQLQNALTMAS 493
Query: 517 DPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL 576
+ ++EA R LED + AE+ Q A I + + +++ + +
Sbjct: 494 SERYEERQLEASTMVRT-LEDHKERLTAELGDATKQARESASIDNKREELQNQQHSLATM 552
Query: 577 KERHDRAFHLLFDMIPEENFKNSLDKALSSI-TFDINRIQEDINAKE---KHLYTLEANV 632
K+ H++ L D PE + SLD A + T +++E + ++ L + +
Sbjct: 553 KKVHNKRLLQLLD--PEWD-PASLDTAYQRVLTEKATKVKEAGSKRDIAQTKLDKINFQL 609
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
++S L+ ++ L ++ E ++ +D++ L++ +E+ +S + F +
Sbjct: 610 ASSESQLKHSQKEL----EKYEGIVKESIQKDDIADFDETLQQLEEDYEAASSDKAKFEA 665
Query: 693 ---YIGKLEENEPR---CPLCTRFFESD----YSVPGLVNKLKTKIKEIPEQTNNKKTHI 742
Y+ K E R C LC R D ++ G ++KLK I++ + N + +
Sbjct: 666 QIDYMSKCLEVAERDNCCRLCMRTLRDDRSEGFTTAGFISKLKEIIRKA--KANMQGDNA 723
Query: 743 DQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK 802
D++ + + + KP YE +L+DTD+P++++ + +L + EL+K + + +
Sbjct: 724 DEIFAELEAARNAKPSYELATRLRDTDLPAIQANIAKLINDRDAVNVELEKWDSLIYELE 783
Query: 803 TKEKTALSLQGDLTL----------LDQNIRELNTLQRELERQESKISGMRSTGVDLDQV 852
+++ SL ++ L+ I+EL+ Q+ K +G+ S G+D QV
Sbjct: 784 AEKQEVESLSKEVQTIVGYFNRACELEDQIKELS--------QKQKAAGL-SRGIDEIQV 834
Query: 853 LAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLE 912
K+ + R+K++ T + + +L+ D++++ Q ++L
Sbjct: 835 --DLKKVTEDTRNARAKLDELTTAKDKSRNLITTLELSVRDVNAELHLAQSKLKEKRALA 892
Query: 913 DRKCELEGMDSVYQTELE----ELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKI 968
+R E + +S + E E+ R V IE Q +++ + ++ ++E +K+
Sbjct: 893 ERIEEFKKENSKLREEKHGFDNEMERLVPEIE-QAQYKYEDINRRSNDRVQRAHDEASKL 951
Query: 969 QDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEI 1028
D +QL + + EI Y KRG QL ++ L+ E I A+ R I +I
Sbjct: 952 SDSLRQLTQANQ---EIDAYVKRGGPQQLTRTHRDIENLHGEIERIQAEMTDVTRKIKKI 1008
Query: 1029 NQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE--NCVIKY 1086
++ + + + + +NL + K ++ L E++ E ++ K H+ E +Y
Sbjct: 1009 EDTMRDTEMMKRSISDNLRFRKAKRSLETLQVEIEKLENAGAERDKEHYEREARQWDNRY 1068
Query: 1087 H-------------SQKMRSINRLIREYWTRIY------------QLKLSEIMISDLTKY 1121
H K + L+ EY +Y +++ ++ +I DL +Y
Sbjct: 1069 HLLNTDKISLERDMKNKDDQLTELMNEY-KNLYKDSAKQYREAHIKVETTKAVIEDLGRY 1127
Query: 1122 HHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVV 1181
L+ ++KYH KM IN+ I E W YQG D+D I IA+D ++ RTYNYRVV
Sbjct: 1128 AGALDKAIMKYHELKMEEINKAIAELWRNSYQGTDVDTIRIASD--GDAKGNRTYNYRVV 1185
Query: 1182 QKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVV 1241
K E +MR RCSAGQ+VLA ++IRL +++ +I DE T +D+ +
Sbjct: 1186 MVKQDTEMEMRGRCSAGQKVLASIVIRLALAESFGTNCGLIALDEP----TTNLDQQNI- 1240
Query: 1242 RIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
K LAE+ S IK Q NFQL+VITHDE+F++ + D
Sbjct: 1241 ------KGLAESLSEI--------------IKVRRKQANFQLLVITHDEQFLKEMNCAD 1279
>gi|6324079|ref|NP_014149.1| Rad50p [Saccharomyces cerevisiae S288c]
gi|131782|sp|P12753.1|RAD50_YEAST RecName: Full=DNA repair protein RAD50; AltName: Full=153 kDa protein
gi|4273|emb|CAA32919.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1255968|emb|CAA65494.1| RAD50 [Saccharomyces cerevisiae]
gi|1302293|emb|CAA96157.1| RAD50 [Saccharomyces cerevisiae]
gi|259149118|emb|CAY82360.1| Rad50p [Saccharomyces cerevisiae EC1118]
gi|285814415|tpg|DAA10309.1| TPA: Rad50p [Saccharomyces cerevisiae S288c]
gi|323352853|gb|EGA85155.1| Rad50p [Saccharomyces cerevisiae VL3]
gi|392297102|gb|EIW08203.1| Rad50p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1312
Score = 286 bits (731), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 346/1363 (25%), Positives = 630/1363 (46%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSSLKEAFQHKFQGLSNIENSDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ +++ +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVI---QLLSENLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S+ ++ + +DS ++EL ++ ++ + + AQS LD +K E
Sbjct: 888 SLTQKQNIDDSIRSKRENINDIDS----RVKELEARIISLKNKKDEAQSVLDKVKNERDI 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++ + + D + ++ + I E++++ +G L+ ++++L K ++ +
Sbjct: 944 QVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----FDELQTTIKELELNKAQMLELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|302680923|ref|XP_003030143.1| hypothetical protein SCHCODRAFT_77659 [Schizophyllum commune H4-8]
gi|300103834|gb|EFI95240.1| hypothetical protein SCHCODRAFT_77659 [Schizophyllum commune H4-8]
Length = 1297
Score = 285 bits (730), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 358/1418 (25%), Positives = 632/1418 (44%), Gaps = 228/1418 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L++L I GIR+F + V+ F P+T+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSSLEKLAIRGIRSFDDKQISVIEFFNPVTVIVGHNGSGKTTIIECLKYATTGDQPPNTR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ + E A VKL+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPKMANEKEVKAQVKLRFHAANGQRMLAVRNLS 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLG---------CLQQESVLEMCNLIGVSKAI 171
++ K K T T S I A + G C + ++ E+ L+GVSK++
Sbjct: 100 VTLK--KTTGMTMKTLES--ILAVADEAQQGKKRGVISTKCAEMDT--EIPQLLGVSKSV 153
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRLRKEIPEIKAH 230
L NVIFCHQE+S WPL E +K+ FD+IF+ATKY KAL+SIK +++DR+ E+ K
Sbjct: 154 LENVIFCHQEDSYWPLSEPSTLKKKFDDIFEATKYTKALDSIKSLRKDRV-AELKTEKVR 212
Query: 231 YQATLNYKKEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTE--KERN 285
+ K + D K I +Q ++ ++++ E+M N+KL + +E
Sbjct: 213 LEGLARDKAQYDKLKARISELSQTIVAKEAEYDQVKVEYEAMVDANQKLYEQANAFRETY 272
Query: 286 MSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDE----KCS 341
M+V + + + K+ ++D+ + + G EL+ +L + ++++ + +
Sbjct: 273 MNVQNLENRKKQLKQDIEEAKAE------MKEEEGSDEELRERLRNHEKHIEKEKGRRLT 326
Query: 342 ELENQERLKSQY--IQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTL 399
E+ +E L+ + ++EE+ T +LGKL ++E ++ ++ + + +
Sbjct: 327 EINAKEDLEEELKAMREEQMHDT------ARLGKLRAEKEAQEQ---RIRDREQIIRELA 377
Query: 400 CLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVE 459
+ TP + +++ D Y K E + ++ Q E+ +E
Sbjct: 378 AKHGISGFNITPLGADKVVEFISRLDDAYR---KSKEELDAQTQDEHQKEL-------LE 427
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP- 518
LE K+ S + + K L I + +Q + +L V+SEI+ ++ L
Sbjct: 428 LEKKVDSLRTRKSTMKTALAEKQASITRDEATLDDMQDIPAQLATVDSEIEDKTEKLKKL 487
Query: 519 -DQLKN-----EIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLAD 572
+Q++ +IE R+ L+D+ E L +Q A+++ + +SK +
Sbjct: 488 REQIRTAAYDKQIEEKAREARLLDDQRNEASREFRFLSSQAEIRAKLQLKRTEVQSKTKE 547
Query: 573 INLLKERHDRAFHLLFDMIP-EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN 631
+ E F + P E + LDKA + QE ++ + + ++ N
Sbjct: 548 VQATIETSRVKFRKIMQKDPVAETMEKDLDKA----RIERESEQETLDKQATNAASVVQN 603
Query: 632 VSNSSKTLRDQKRTLAE---LMDR-MELVLGSKP-FEDELDRVTLELKREQEEVSMMTST 686
+ T+R + +T E ++DR ++ VLG +P E + E++ ++ + +
Sbjct: 604 SETAITTMRQEVKTNKERIRVLDRNIKKVLGERPTIEKAIAEAKEEIEFRRKRIEGLKGG 663
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEI-PEQTNNKKTHIDQ- 744
+ L ++ ++ E +CP C R + D + ++ I P++ + K +++
Sbjct: 664 KTLLERWL-QIGEEHKKCPACVRMMD-DRELREFEKTMREHIGNADPKKLDGTKNEMEEW 721
Query: 745 ---------LCKQQRSLQELK---PVYENIMKLQDTDIPSLRSKLIELEENVIETKGELK 792
L QQ L+ LK P E +K Q+ +P L ++ E+ +
Sbjct: 722 EQELVELEGLIPQQLELERLKEETPALEAKIKAQEDALPELSAQADEITD---------- 771
Query: 793 KLKTALETPKTKEKTALSLQG-DLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQ 851
K L + E AL LQ ++T L +++ L E+E S +ST DL
Sbjct: 772 --KIDLLRKQANEVQALKLQAANITRLQKDVERLKEEIEEIEHDLSATGSTKSTD-DLQA 828
Query: 852 VLAQQKEKKNELNTFRSKIESGQTRLN----SHNEKLQSLQKQKNDIHSKQLTVQGGAGM 907
+ + ++ L ++ + + R+N S +L SLQ ++ ++ SK
Sbjct: 829 EIEKMTDQIRLLEREKNHLTADSNRMNNSVISTERELHSLQTRRMELTSK-------VEK 881
Query: 908 LKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDAL-------------- 953
+K+LE E + +EE+ I+ ++ AQ +DAL
Sbjct: 882 MKTLETNIAE-------AKKRIEEIAVDQKDIDVRIREAQGPIDALNAQWESIRAELRAI 934
Query: 954 ---KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQK---- 1006
EH + L+ + K+ + K L+ +Y K + L +V++
Sbjct: 935 IETASEHTRALSLDSDKLNNINKALQ----------SYVKEKSQRILDECSNTVEQRKVE 984
Query: 1007 LNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN------- 1059
+N+ E + A+R V E+ EIN+S A+Q+ L+ N+ + + ++ + ++
Sbjct: 985 INELSERVEAQRRVIEKIDKEINESGASQA----SLRENIRVRKMQKEIVEIQTEIDKVD 1040
Query: 1060 -EELKLSEIMISDLTK------------YHH-----TLENCVIKYHSQKMRSINRLIREY 1101
EE+ S D K Y H T + +R + ++Y
Sbjct: 1041 MEEIARSRRAFKDQYKPAKEKETELQGQYSHIGGMLTSSREQLSTWEHDLRDFKDINKKY 1100
Query: 1102 WTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
++ ++K+S++ +DL KY L++ ++KYHS KM +N +R W + YQG DID I
Sbjct: 1101 TEQLIRVKMSDMANNDLEKYAKALDSAIMKYHSLKMEEVNDTMRHLWNKTYQGTDIDGIK 1160
Query: 1162 IAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIV 1221
I +DV G+ K R+YNYRVV K+ +E DMR RCSAGQ++LA +IIRL +SD +
Sbjct: 1161 IRSDVEGGASK-RSYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGI 1219
Query: 1222 ITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA-SDQKN 1280
+ D E A+D + ALA + +DI N + N
Sbjct: 1220 LALD----EPTNALDTENI-------DALASSL---------------VDIINERKNHSN 1253
Query: 1281 FQLIVITHDEEFIENLTAID-RAYVVRIVRDHKGLSDI 1317
FQLI+ITHDE F+ L + + R+VRD + S I
Sbjct: 1254 FQLIIITHDENFLRKLGQSEVMEHYWRVVRDSRQKSII 1291
>gi|207341906|gb|EDZ69838.1| YNL250Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1312
Score = 285 bits (730), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 346/1363 (25%), Positives = 630/1363 (46%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSSLKEAFQHKFQGLSNIENSDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ +++ +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVI---QLLSENLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQTEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S+ ++ + +DS ++EL ++ ++ + + AQS LD +K E
Sbjct: 888 SLTQKQNIDDSIRSKRENINDIDS----RVKELEARIISLKNKKDEAQSVLDKVKNERDI 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++ + + D + ++ + I E++++ +G L+ ++++L K ++ +
Sbjct: 944 QVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----FDELQTTIKELELNKAQMLELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|256272374|gb|EEU07357.1| Rad50p [Saccharomyces cerevisiae JAY291]
Length = 1312
Score = 285 bits (728), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 346/1363 (25%), Positives = 630/1363 (46%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSSLKEAFQHKFQGLSNIENSDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ +++ +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVI---QLLSENLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S+ ++ + +DS ++EL ++ ++ + + AQS LD +K E
Sbjct: 888 SLTQKQNIDDSIRSKRENINDIDS----RVKELEARIISLKNKKDEAQSVLDKVKNERDI 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++ + + D + ++ + I E++++ +G L+ ++++L K ++ +
Sbjct: 944 QVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----FDELQTTIKELELNKAQMLELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDLKSNELNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|190409224|gb|EDV12489.1| DNA repair protein RAD50 [Saccharomyces cerevisiae RM11-1a]
Length = 1312
Score = 284 bits (726), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 345/1363 (25%), Positives = 630/1363 (46%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSSLKEAFQHKFQGLSNIENSDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ +++ +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVI---QLLSENLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S+ ++ + +DS ++EL ++ ++ + + AQS L+ +K E
Sbjct: 888 SLTQKQNIDDSIRSKRENINDIDS----RVKELEARIISLKNKKDEAQSVLEKVKNERDI 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++ + + D + ++ + I E++++ +G L+ ++++L K ++ +
Sbjct: 944 QVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----FDELQTTIKELELNKAQMLELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|343426959|emb|CBQ70487.1| probable RAD50-DNA repair protein [Sporisorium reilianum SRZ2]
Length = 1309
Score = 283 bits (725), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 372/1444 (25%), Positives = 630/1444 (43%), Gaps = 264/1444 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I G+R+F +++F PLT+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLDKLAIRGVRSFDDKSINIIQFFHPLTVIVGYNGSGKTTIIECLKYATTGDLPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ +E A V+L+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPQMATSNEVKAQVRLRFYAANKVRMNCVRNLQ 99
Query: 121 LSNKNGKDNCATRDT-----TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+S K G T T I+ TG + L E E+ L+GVSK+IL NV
Sbjct: 100 VSRKKG--GGLTMKTLEGLLQIADDDAKTGKRGTLSTKCSELDEEIPRLLGVSKSILENV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S+WPL E +K+ FD+IF+AT+Y KAL++IK R ++ KA +
Sbjct: 158 IFCHQEDSNWPLSEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTNQLKVDKAALEGLK 217
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQ----LTEKERNMSVMST 291
K AD+ K + + Q +L ++ E ++ K VQ E R ++S
Sbjct: 218 VDKDRADTIKTKLTHLQADLAQKEAKLEDLNEEIRV---KTVQNSKFYDEATRFREIVSR 274
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
++ ER + +E+ + L++++ + D+ +LQ + F+ +LD+ S++ + +R ++
Sbjct: 275 AETLEEKER-LHKENMDALQATMTPIKDSDE-DLQKRKQKFQSHLDQNQSKIHSLKRRQA 332
Query: 352 QYIQE-EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ E E Q H + K G LE ++ H + + + + + + L +
Sbjct: 333 EKEDELETQEQRHRKKLSEK-GGLEAEKRAHLQAKEKREASIKQIGNELGIKGFG----- 386
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
G+G L+D +I R F D + +++ + E SK + Q
Sbjct: 387 ---GDG------------LTDAQI--RGFEDRVKDEVRKLDDELARLREANSKKEDHLSQ 429
Query: 471 IEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
N + + + N Q +++ L+ K+ R E+D + S +IEA R
Sbjct: 430 AWQNLR--ADHRAKQNAREQLAGSVRKLREKIKRAQDELDGYALS------STDIEAAER 481
Query: 531 QRNELEDELCVIDAEISI------LQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
+R+ L + E ++ +N A+I+ + +E + A+INLL +
Sbjct: 482 ERDGLSAKAAAAQKEFEEAKFEEQIRKKN---ADIREKDDLREERTAEINLLNRHAELRA 538
Query: 585 HLLFDMIPEENFKNSL-----------------DKALSSITFDINRI-------QEDINA 620
L M +N+ D L + ++ R+ E+++A
Sbjct: 539 SLGLKMQQATTRRNNAQELFDRHKSALAERVRPDMQLGEVEGEVTRVLSKHEKRLEELDA 598
Query: 621 ----KEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTL---EL 673
K + L +E+ +S + K L+ +K AEL ++ ++ S F+D + V + E+
Sbjct: 599 TNADKNRELQQIESALSFARKQLKSKKELAAELQRAIQAII-SPDFDDAEEAVKICAEEI 657
Query: 674 KREQEEVSMMTSTQYLFNSYIGKL---EENEPRCPLCTR------------FFESDYSVP 718
++E + + S +S++ ++ + + C C R S S
Sbjct: 658 AAAKDEYASIDS----LDSFLRRVLREAKGKGHCFACNRGVSPSEYDAIEKHVSSTLSSS 713
Query: 719 GLVNKLKTKIKEIPEQTNNKKTHIDQLCK--QQRSLQELKPV-YENIMKLQDTDIPSLRS 775
K KT +I T L K Q++ +Q+++ V E + ++ ++
Sbjct: 714 NTAQKKKTLKADIDGWTERNAECQTALAKDAQRKVIQDVEIVELEKTISTKEAELKVAAE 773
Query: 776 KLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQ 835
V + + ELK+L+ AL T LS DL E+ LQ +L
Sbjct: 774 AAEASSAEVAKMQAELKELQ-ALRRVGTDIARLLSEANDLDA------EVQNLQGDLAST 826
Query: 836 ESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNS-----HNEKLQSLQKQ 890
S +G ++DQ+ A K K ELN + E+ +T +NS H ++ + K+
Sbjct: 827 GSTQTG-EQVQAEIDQLAASIKVLKRELNALQQDRETKRTLINSLERDAHRAEVAVITKK 885
Query: 891 KNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSEL 950
+ ++K+ +V+ + L++ ELE +T E+ PI A+ E
Sbjct: 886 QE--YAKKASVE------QQLQEMNAELEEQQKRIKTLDVEIESANGPIRR----ARDEH 933
Query: 951 DALK---KEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKL 1007
+A K E + KL K++ + KQ+ E + + Y ++ +L +E++Q+L
Sbjct: 934 EAFKAEASEAESKLRARADKLEGWAKQICE---LNAAVNAYIQQRGDQRLEECKEAIQEL 990
Query: 1008 NQRKEDIIAKRGVCERTINEINQSIA------NQS-LEEIDLKNNLTLLEKKEAVAKLNE 1060
+ K R + E+ +A NQS E ++ +N+ + + VAK+ E
Sbjct: 991 -------VDKMQAIHREVKELTDKVAELQKELNQSQATERNILDNIRYRQLAKDVAKIEE 1043
Query: 1061 ELKLSEIMISDLTKYHHTLE-----------NCVIKYHSQKMRSINRLIR---------- 1099
E+ ++ + ++ H + N + S ++ S+ I+
Sbjct: 1044 EINSLDLEQAQRSRKHFADKYTEAKEEENRLNGEASHLSGELASLRSQIKGRELELRDEF 1103
Query: 1100 -----EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQG 1154
Y ++ ++K SE+ +DL KY LEN +++YH+ KM IN +IR W + YQG
Sbjct: 1104 KGVHQNYKRKLIEVKTSEMANNDLEKYAKALENAIMRYHAIKMEEINDIIRYLWQKTYQG 1163
Query: 1155 NDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
DID I I +D G+ R+YNYRV K+ +E DMR RCSAGQ+VLA +IIRL ++
Sbjct: 1164 TDIDTILIKSD-NEGARGNRSYNYRVCMVKDTVEMDMRGRCSAGQKVLASIIIRLALA-- 1220
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--- 1271
E+F NCGI ALDEPTTNLD
Sbjct: 1221 -------------------------------------ESFGSNCGILALDEPTTNLDKDN 1243
Query: 1272 -----------IKNASDQKNFQLIVITHDEEFIENLTAID-RAYVVRIVRDHKGLSDIHL 1319
IK ++ QLIVITHDE+F+ L D Y R+ R D+H
Sbjct: 1244 IEALARSLADLIKERAENSQLQLIVITHDEDFLTLLGQNDVLEYYWRVSR------DVHQ 1297
Query: 1320 RSLL 1323
+S++
Sbjct: 1298 KSII 1301
>gi|356567935|ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
Length = 1316
Score = 283 bits (724), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 356/1421 (25%), Positives = 656/1421 (46%), Gaps = 204/1421 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
+A SG +F+HDP++ + ET +KL+ T D VCV RS
Sbjct: 57 ----------------PNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCV-RSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ ++WPL + +K+ FD+IF AT+Y KALE IK +EI K + K
Sbjct: 160 QDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKEQAQEIKTYKLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
A ++ I + +K + + +L ++ S++ ++ K+ E + + + Q TK +
Sbjct: 220 AAYKLRESIAQDQEKTESAECQLQQLDGSIQELDHKIHHTEETLKYLRKLQEQISTKTAQ 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNL--FKINLDEKCSELENQ-ERLKSQYIQE 356
R ++ + KQ + + + L +K +E+ + LE + RL+ +
Sbjct: 280 RSIL------FKEQQKQYLALTEEIEDTDEELMEWKTKFEERIASLETKISRLERETEDI 333
Query: 357 EKQSHT---HINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEE 413
+ S T I E+ + KL+ + E H + + ++NL T L + KS ++ E
Sbjct: 334 DCTSSTLKETIAESIEVIAKLQAEAEAHMSFKNERDSSIHNLFTTYNLGSLPKSPFSAEV 393
Query: 414 GEGLIKMSQTTIDKYLSDIKILERTFSD----NENTKQAEINALIVEKVEL---ESKIKS 466
L ++ S ++ LE+ D N+N + + + L E+KIK+
Sbjct: 394 ALNLT-------NRVKSRLEDLEKDLDDKKKANDNEIKMAFDCYMNANDRLKHTEAKIKA 446
Query: 467 F-------KQQIEGNKKDLTNVITQINEVNQSQ--STLQVLQTKLNRVNSEIDQLSKSLD 517
++IE K +L ++ QI++ N SQ + L+ ++ R S++D+ + +
Sbjct: 447 MTGSKSGISKRIEEKKNELDSLELQISDENFSQLDERERNLENEVKRKASQLDE--RQFE 504
Query: 518 PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKES-KLADINLL 576
P++ + E E + ++ ++ + E I+ + + ++ K ES K ++
Sbjct: 505 PNKCEVEKEIY-----SVDQKIKAVSREKDIMVSDSQDRVKLSYKKGELESQKKKHKKII 559
Query: 577 KERHDRAFHLLFDMIP-EENFKNSLDKALSSITFDINRIQEDINAK----EKHLYTLE-- 629
E+ D+ +L +P +++ K + +AL ++ + + D+NAK EK + L+
Sbjct: 560 DEQKDKIRKVLKGRVPLDKDVKKEIMQALRAVGAEFD----DLNAKYREAEKEVNVLQVK 615
Query: 630 -----ANVSNSSKTLRDQKRTL-AELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMM 683
+N+S K L +KR + ++L + G + L+ + ++ + ++
Sbjct: 616 IQEVNSNLSKHHKDLESRKRYIESKLQSLDQQCSGIDSYLKVLESAKEKRDVQRSKYNIA 675
Query: 684 TSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTK-------IKEIPEQTN 736
+ +F+ + N CP C R F S V K + K +K + +++
Sbjct: 676 DGMRQMFDPFERVARANHV-CPCCERPF-SPEEEDSFVKKQRVKATSSAGHMKVLAVESS 733
Query: 737 NKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKT 796
N ++H QL K L+ +YE +KL IP+ +L +L+E + + L +
Sbjct: 734 NAESHFQQLDK-------LRMLYEEYVKLGKETIPNSEKELQQLKEEMDDKSQALDDVLG 786
Query: 797 ALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQ 855
L K+ + +L + D+ +E+ LQ+++E E K R+ GV L+++
Sbjct: 787 VLAQVKSDKDLVETLVQPVENADRIFQEIQALQKQVEDLEDK-HNFRAQGVRTLEEI--- 842
Query: 856 QKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQ----GGAGMLKSL 911
+ ELNT +S E+ Q+ L+ ++ + ++K + I + TV+ +L+ +
Sbjct: 843 ----QLELNTLQSTKENLQSELDRLKDEQRYMEKDLSSIQMRWHTVREEKTKATNILQGV 898
Query: 912 EDRKCELEGMDSV-YQTELEE--LGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKI 968
+ + ELE + Q +L+E L + P+ + + + + LK +++ + +
Sbjct: 899 KRLEEELERLTEEKTQVDLDEKHLADALGPLSKETDKLLANHNELKIRLEREYEDLAEQK 958
Query: 969 QDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVC 1021
+ Y ++ + + ++ +I Y+ +L L+E +Q + RK++I+A+
Sbjct: 959 RSYQQEAQALFKMNSKIKTYSDLKKGDRLKELQEKKSSSESQLQSFDTRKQEILAE---- 1014
Query: 1022 ERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL------------------- 1062
+N+ + Q + ++++NL + K V +L E+
Sbjct: 1015 ---LNKSKDLMRGQDQLKRNIEDNLNYRKTKAEVDELAHEIETMEENILKAGRISTVETE 1071
Query: 1063 --KLS---EIMISDLTK-------YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKL 1110
KLS E ++S+L + Y + + + + I++ Y+ ++ QLK
Sbjct: 1072 LQKLSQERERLLSELNRCRGTMSVYQSNISKNKVDLKQAQYKDIDK---RYFDQLIQLKT 1128
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTG 1169
+E+ DL +Y+ L+ ++++H+ KM IN++IRE W + Y+G DIDYISI +D G G
Sbjct: 1129 TEMANKDLDRYYSALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAG 1188
Query: 1170 SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFI 1229
+ R+Y+Y+V+ + E +MR RCSAGQ+VLA LIIRL +++ ++ DE
Sbjct: 1189 T---RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT 1245
Query: 1230 ENLTAID----RAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIV 1285
NL + A +VRI+ D K Q+NFQLIV
Sbjct: 1246 -NLDGPNAESLAAALVRIMEDRKG----------------------------QENFQLIV 1276
Query: 1286 ITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIHLRSLLSSR 1326
ITHDE F + + R + R R K D H S++ S+
Sbjct: 1277 ITHDERFAQLIGQ--RQHAERYYRVAK---DDHQHSIIESQ 1312
>gi|388851655|emb|CCF54651.1| probable RAD50-DNA repair protein [Ustilago hordei]
Length = 1309
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 367/1428 (25%), Positives = 647/1428 (45%), Gaps = 232/1428 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I G+R+F +++F PLT+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLDKLAIRGVRSFDDKSINIIQFFHPLTVIVGYNGSGKTTIIECLKYATTGDLPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ +E A V+L+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPQMATSNEVKAQVRLRFYAANKVRMNCVRNLQ 99
Query: 121 LSNKNGKDNCATRDT-----TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+S K G T T I+ + TG + L E E+ L+GVSK+IL NV
Sbjct: 100 VSRKKG--GGLTMKTLEGLLQIADEDAKTGKRGTLSTKCSELDEEIPRLLGVSKSILENV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S+WPL E +K+ FD+IF+AT+Y KAL++IK R ++ KA +
Sbjct: 158 IFCHQEDSNWPLSEPASLKKKFDDIFEATRYTKALDNIKTLRKDRTNQLKVDKAALEGLK 217
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQ----LTEKERNMSVMST 291
K AD+ K + + Q +L ++ E ++ K VQ E R ++S
Sbjct: 218 VDKDRADTIKTKLTHLQADLAQKEAKLEDLNEEIRI---KTVQNSKFYDEATRFREIVSR 274
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
++ ER + +E+ L++++ + D+ ELQ + F+ +LD+ S++ + LK
Sbjct: 275 AETLEEKER-LHKENMEALQATMTPIKDTDE-ELQKRKQSFRSHLDQAQSKINS---LKK 329
Query: 352 QYIQEEKQSHTHINEAQMKL---GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQ 408
+ ++E + T+ + KL G LE ++ H + + + + +A+ L +
Sbjct: 330 RTAEKEDELETNEQRHRKKLSEKGGLEAEKRAHVQAKEKREASIKQIANELGI------- 382
Query: 409 YTPEEGEGLIKMSQTTI----DKYLSDIKILERTFS---------DNENTK-----QAEI 450
+G G ++ T I D+ +++ L+ F+ D+E T +AE+
Sbjct: 383 ----KGFGGEDLTDTQIRSFEDRVKEEVRKLDDEFARLRETNSKKDDELTTAWQNLRAEL 438
Query: 451 NALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEID 510
A + +L ++ K +++ + DL ++ ++ L K+ E++
Sbjct: 439 RAKQNAREQLTDSVRKLKDKVKRAQDDLDGYALSNADIEAAERDRDNLSAKVAAAQKEVE 498
Query: 511 QLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKL 570
+ +K + + KN A IR+++EL +E +EI++L A + + ++
Sbjct: 499 E-AKYDEQIRKKN---AEIREKDELREERT---SEINLLNRHAELRASLGLKMQQATTRR 551
Query: 571 ADINLLKERHDRAF--HLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTL 628
+ L +RH + + DM + +N + + L+ + ++ + K + L +
Sbjct: 552 NNAQGLFDRHKSSLSDRICTDM-ELRDVENEVVRVLTKHEKRLGELEAVNSDKNRELQQV 610
Query: 629 EANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTL---ELKREQEEVSMMTS 685
E+ +S + K ++ ++ AEL + +L S F+D + V + E+ ++E + + S
Sbjct: 611 ESAISFARKQIKSKQEVAAELQQTVSSIL-SPDFDDAEEAVKICAEEIAAAKDEYASIDS 669
Query: 686 TQYLFNSYIGKL---EENEPRCPLCTR-FFESDY-SVPGLVNKLKTKIKEIPEQTNNKKT 740
+S++ ++ + + C C R S+Y ++ VN + E+ K
Sbjct: 670 ----LDSFLRRVLREAKGKGHCFACNRGVTPSEYEAIEKHVNTTLSS-SNTTEKKKTLKA 724
Query: 741 HIDQLCKQQRSLQ-------ELKPVYE-NIMKLQDTDIPSLRSKLIELEENVIETKGELK 792
ID ++ Q + K + E I+ L++T I S ++L E E + E+
Sbjct: 725 DIDGWSERSAECQIALAKDAQRKAIEEVEIVDLRNT-ISSKEAELKEAAEAAETSSAEVA 783
Query: 793 KLKTALETPKTKEKTALSLQG-DLTLLDQNIRELNTLQRELERQESKIS--GMRSTG--- 846
K++T L KE +L G D+ L + E + L E++ +S ++ G TG
Sbjct: 784 KMQTEL-----KELQSLRRVGNDIARL---LSEASDLDSEVQSLQSDLATTGSTQTGEQV 835
Query: 847 -VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTV---- 901
++DQ+ A K K ELN + E+ +T +NS + D H ++TV
Sbjct: 836 QAEIDQLAASIKVLKRELNVLQQDRETKRTLINSF----------ERDAHRAEVTVITKR 885
Query: 902 ---QGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHK 958
A + + L++ +LE Q ++ L ++ T + A+ L++ K E
Sbjct: 886 QEYAKKASIEEQLQEMNADLEEQ----QKRIKSLDAEIESSSTPIRRAKDGLESFKAEAS 941
Query: 959 KKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKR 1018
K N+ A++ ++++ + + Y ++ +L E++Q+L ++ + I R
Sbjct: 942 KAENKLRARVDKLEVWAKQIRELNAAVNAYIQQRGTQRLEECEEAIQELVEKIQGI--HR 999
Query: 1019 GVCERT--INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
V E T I E+ + + E ++ +N+ + + V ++ EE+ ++ + ++ H
Sbjct: 1000 DVKELTDKITELQKEVNQSQATERNILDNIRYRQLAKDVLQIEEEINSLDLEQAQRSRKH 1059
Query: 1077 HTLE-----------NCVIKYHSQKMRSINRLIR---------------EYWTRIYQLKL 1110
+ N + S ++ S+ I+ Y ++ ++K
Sbjct: 1060 FADKYTEAKEEENRLNGEASHLSGELASLRSQIKGRELELRDEFKGVHQNYKRKLIEVKT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
SE+ +DL KY LEN +++YH+ KM IN +IR W + YQG DID I I +D G+
Sbjct: 1120 SEMANNDLEKYAKALENAIMRYHAIKMEEINDIIRYLWQKTYQGTDIDTILIKSD-NEGA 1178
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIE 1230
R+YNYRV K+ +E DMR RCSAGQ+VLA +IIRL ++ E F
Sbjct: 1179 RGNRSYNYRVCMVKDTVEMDMRGRCSAGQKVLASIIIRLALA-------------ESFGS 1225
Query: 1231 NLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------------IKNAS 1276
N CGI ALDEPTTNLD IK +
Sbjct: 1226 N--------------------------CGILALDEPTTNLDKDNIEALARSLADLIKERA 1259
Query: 1277 DQKNFQLIVITHDEEFIENLTAID-RAYVVRIVRDHKGLSDIHLRSLL 1323
+ QLIVITHDEEF+ L D Y R+ R D+H +S++
Sbjct: 1260 ENSQLQLIVITHDEEFLTLLGQNDVLEYYWRVSR------DVHQKSII 1301
>gi|443895345|dbj|GAC72691.1| DNA repair protein RAD50 [Pseudozyma antarctica T-34]
Length = 1309
Score = 281 bits (720), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 359/1423 (25%), Positives = 635/1423 (44%), Gaps = 222/1423 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I G+R+F +++F +PLT+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLDKLAIRGVRSFDDKSINIIQFFQPLTVIVGYNGSGKTTIIECLKYATTGDLPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ +E A V+L+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPQMATSNEVKAQVRLRFYAANKVRMNCVRNLQ 99
Query: 121 LSNKNGKDNCATRDT-----TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+S K G T T I+ TG + L E E+ L+GVS++IL NV
Sbjct: 100 VSRKKG--GGLTMKTLEGLLQIADDDAKTGKRGTLSTKCSELDEEIPRLLGVSRSILENV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S+WPL E +K+ FD+IF+AT+Y KAL++IK R ++ KA +
Sbjct: 158 IFCHQEDSNWPLAEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTNQLKVDKAALEGLK 217
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQ----LTEKERNMSVMST 291
K AD+ K + + Q +L ++ E ++ K VQ E R ++S
Sbjct: 218 VDKDRADTIKSKLTHLQADLAQKEAKLEDLNEEIRI---KTVQNSKFYDEATRFREIVSR 274
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
++ ER + +E+ L++++ + D+ +LQ + F+ LD+ +++ L++
Sbjct: 275 AETLEEKER-LHKENMEALKATMTPIKDNDE-DLQKRKQTFRAQLDQSHAKIST---LQT 329
Query: 352 QYIQEEKQSHTHINEAQMKL---GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + E + H + KL G LE ++ H + + +T + +++ L + A
Sbjct: 330 RIAKREDELEAHEQRHRKKLSDKGGLEAEKRAHVQAKEKRETAVKRISNELGIKGFAGDG 389
Query: 409 YTPEE---GEGLIKMSQTTIDKYLSDIKILERTFSDNENT----KQAEINALIVEKVELE 461
+ + E +K +D L ++ D T +AE+ A + +L
Sbjct: 390 LSDAQIRSFENRVKEDMRKLDDELGRLREANAQKDDQLTTAWQNARAELRAKQNAREQLV 449
Query: 462 SKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQL 521
++ +++I+ +++L +V + + L KL E + D+
Sbjct: 450 DNVRKLREKIKRAQEELDGYALSDADVEAATRERESLAAKLTAAQKEF----TDANYDEQ 505
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHD 581
A IR++++L +E AEI++L A + + S+ + L ERH
Sbjct: 506 IRRKNAEIREKDDLREERT---AEINLLNRHAELRASLALKMQQAGSRRTNAQGLFERHK 562
Query: 582 RAF--HLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
+ H+ D + + ++ L + LS + + ++ K + L +E+ +S + K L
Sbjct: 563 ASISQHVASD-VELSSVEHELMRTLSKLEKQASEVEAKNVEKNRQLQEVESTISFARKQL 621
Query: 640 RDQKRTLAELMDRMELVLGSKPFEDELDRVTL---ELKREQEEVSMMTSTQYLFNSYIGK 696
+ ++ EL + +L S F+ + V + E+ ++E + + S +S++ +
Sbjct: 622 KSKEAAANELQQAITAIL-SPDFDSAEEAVKVCAEEIAAAKDEYASIDS----LDSFLRR 676
Query: 697 L---EENEPRCPLCTRFFE-SDYSV--PGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR 750
+ + + C C R S+Y + + L T E+ K ID ++
Sbjct: 677 VLREAKGKGHCFACNRGVNPSEYEAIEKHVSSTLST--SNTAEKKKTLKADIDGWTERSA 734
Query: 751 SLQELKPVYENIMKLQDTDIPSLR-SKLIELEENVIETKGELKKLKTALETPKTKEKTAL 809
Q +D + ++R +++ EL++ + + ELK++ A E +
Sbjct: 735 ECQ--------TALAKDVQLKAIRGTEMAELQKTLDTKEAELKQVAAAAEEASAEVSKIQ 786
Query: 810 SLQGDLTLLDQNIRELNTLQRELERQESKISGMRS----TG---------VDLDQVLAQQ 856
S +L L + ++ L E ES++ G++S TG ++DQ+ +
Sbjct: 787 SQLKELQSLRRVGSDIARLLAEAGDLESEVRGLQSDLATTGSTQTGEQVQAEIDQLASSI 846
Query: 857 KEKKNELNTFRSKIESGQTRLNS-----HNEKLQSLQKQKNDIHSKQLTVQGGAG-MLKS 910
+ K ELN + E+ +T +NS H ++ + KQ+ +K+ VQ G M
Sbjct: 847 RVLKRELNVLQQDRETKRTLINSLERDAHRAEVAVITKQQE--QAKKTAVQTHLGEMNAD 904
Query: 911 LEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKK---EHKKKLNEEGAK 967
LE+++ ++ +++ +T API A+ EL+ K E + KL +
Sbjct: 905 LEEQQKRIKSLEAEIET-------SNAPIRR----AKEELETFKAEAGEAENKLKRRADE 953
Query: 968 IQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERT--- 1024
++ + KQ+ E + + Y ++ +L E++ L ++ + I R V E T
Sbjct: 954 LEGWAKQIRE---LNAAVNAYIQQRGDERLEECEEAINTLVEQIQAI--HRDVKELTDKA 1008
Query: 1025 ---INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE- 1080
E+NQS A E ++ +N+ + + VA++ EE+ ++ + ++ H +
Sbjct: 1009 AELQKELNQSQAT----ERNILDNIRYRQLAKDVAQIEEEINSLDLEQAQRSRKHFADKY 1064
Query: 1081 ----------NCVIKYHSQKMRSINRLIR---------------EYWTRIYQLKLSEIMI 1115
N + S ++ S+ I+ Y ++ ++K SE+
Sbjct: 1065 TEAKEEENKLNGEASHLSGELASLRSQIKGREAELRDEFKGVHQNYKRKLIEVKTSEMAN 1124
Query: 1116 SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRT 1175
+DL KY LEN +++YH+ KM IN ++R W + YQG DID I I +D G+ +R+
Sbjct: 1125 NDLEKYAKALENAIMRYHAIKMEEINDIVRYLWQKTYQGTDIDTILIKSD-NEGARGKRS 1183
Query: 1176 YNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAI 1235
YNYRV K+ +E DMR RCSAGQ+VLA +IIRL ++
Sbjct: 1184 YNYRVCMVKDTVEMDMRGRCSAGQKVLASIIIRLALA----------------------- 1220
Query: 1236 DRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------------IKNASDQKNF 1281
E+F NCGI ALDEPTTNLD IK ++
Sbjct: 1221 ----------------ESFGSNCGILALDEPTTNLDKDNIEALARSLADLIKERAENSQL 1264
Query: 1282 QLIVITHDEEFIENLTAID-RAYVVRIVRDHKGLSDIHLRSLL 1323
QLIVITHDE+F+ L D Y R+ R D+H +S++
Sbjct: 1265 QLIVITHDEDFLTLLGQNDVLEYYWRVSR------DVHQKSII 1301
>gi|169858554|ref|XP_001835922.1| RAD50 [Coprinopsis cinerea okayama7#130]
gi|116503092|gb|EAU85987.1| RAD50 [Coprinopsis cinerea okayama7#130]
gi|157428273|gb|ABV56236.1| RAD50 [Coprinopsis cinerea]
Length = 1309
Score = 281 bits (720), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 356/1428 (24%), Positives = 637/1428 (44%), Gaps = 236/1428 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L++L I GIR+F + V+ F P+T+IVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSSLNKLAIRGIRSFDDKQISVIEFFSPVTVIVGHNGSGKTTIIECLKYATTGEQPPNTR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ + E A VKL+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPKMANEKEVKAQVKLRFHSANGTRMLAVRNLS 99
Query: 121 LSNKN-------------GKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGV 167
++ K G D+ T R + +T C + + +E+ L+GV
Sbjct: 100 VTVKKTAGLTMKTLESILGLDDPGK---TNKRAVISTK------CAEMD--VEIPQLLGV 148
Query: 168 SKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRLRKEIPE 226
SKA+L NVIFCHQE+S WPL E +K+ FDEIF+ATKY KAL++IK +++DR + +
Sbjct: 149 SKAVLENVIFCHQEDSYWPLAEPSILKKKFDEIFEATKYTKALDNIKALRKDR----VAD 204
Query: 227 IKAHYQ--ATLNYKKEADSK--------------KQLIYNNTQKRDQSFEELHNIEESMK 270
+KA + ++L +K+ K K+ Y N + + +EE+ N
Sbjct: 205 LKAEQERLSSLKLQKDRADKLRLRMKDLNATIVAKEAEYENAKAQ---YEEVQNSNRIFY 261
Query: 271 PINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLN 330
N K +E + V S + + K D+ E Q SG +LQ++LN
Sbjct: 262 DYNSKF-----REIYLKVESLEEKKKSKRMDL-----EEARDGNFQEISGTDDDLQNRLN 311
Query: 331 LFKINLDEKCSELENQER-----------LKSQYIQ-EEKQSHTHINEAQMKLGKLERDE 378
F ++D + L +ER L+++ +Q E ++ + + +ER+E
Sbjct: 312 RFDAHVDSQRERLAKEERRRQDIEDELTDLRNREVQLSEMKAQYEVEAKNQRARVIEREE 371
Query: 379 ---ETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKIL 435
E K+ N T + + LD + SQ+ L +++ D+ S+I+ L
Sbjct: 372 LVREIAKQFNITGIS-------SQSLDKSQVSQF-------LSRLTDLRRDRT-SEIEQL 416
Query: 436 ERTFSDNENTKQAEINALIVEKVELESKIK-------SFKQQIEGNKKDLTNVITQINEV 488
+ S K E NA +++EL+ +++ + K Q+ + Q++E
Sbjct: 417 QLDAS----AKNDEFNA---QRLELDRQVQTHKIRKTTLKDQLSERNASIKQAQRQLDEQ 469
Query: 489 NQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISI 548
Q++L LQ ++ I +L K + + +++ I +LE++ + E
Sbjct: 470 ATHQASLNSLQEEMQEKEERIKKLRKEMANSEHDKKLQEKIDLARQLEEKRESLMEETRA 529
Query: 549 LQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF--HLLFDMIPEENFKNSLDKALSS 606
L Q + A++ + +K +I + + ++ + H D+ + + +D+ +
Sbjct: 530 LSTQADSRAKLDLKRTEIRTKTVEIQTIMKTVNQKYREHAKRDL-DADTAEIEVDRVIRQ 588
Query: 607 ITFDINRIQEDINAKEKHLYTLEANVSN-----SSKTLRDQKRTLAELMDRMELVLGSKP 661
D++R++ + + L+++E ++N S+K +K T ++ +
Sbjct: 589 KEDDVDRLEAGLGSARASLHSVETEMANIKAQISAKESECEKHT-------KKITSSLRA 641
Query: 662 FEDELDR-VTLELKREQEEVSMMTST-QYLFNS---YIGKLEE--NEPRCPLCTRFFESD 714
F+ D+ V ++ Q E++ + S + F Y LEE N C C R S
Sbjct: 642 FDLSPDKAVNDAIEVAQTEINHIRSDLEKQFGPIAVYQRILEEGVNNHICLGCNRGLRSS 701
Query: 715 YSVPGLVNKLKTKIKEIPEQTNNKKTH--IDQLCKQQRSLQELKPVYENIMKLQDTDIPS 772
+ N L+ IK+ E+T + + +++ + SL LK + + + +IP+
Sbjct: 702 -ELKDFKNHLEGMIKD-AEKTEKRDLNNDLEEWNRTLVSLTNLKGIEHSRHNITTKEIPA 759
Query: 773 LRSKLIEL--EENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQR 830
L++ L E E V+E K E L LE K K L+ L QN+ ++ L++
Sbjct: 760 LKATLEEKREEHQVLEEKAET--LGEELEEAKDTLKA-------LSTLKQNVSTVSRLKK 810
Query: 831 ELERQESKISGMRS------TGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
E+ER E ++S + + + +D V A+ E + L + ++ T L
Sbjct: 811 EIERAEKEVSDLETDLSLSGSTKTVDDVQAELNEITSRLRAIEKERQAISTERERQTTAL 870
Query: 885 QSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLN 944
S + + ND+ ++ + + L +R +++ + +L++L K+A + +
Sbjct: 871 HSFETRLNDLKVEEQKLLNQLNEVDKLSERVQQMKNDIVTFTAQLKDLDTKIAEAQAPIQ 930
Query: 945 LAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
+ E +K++ K+++ + + + +++ + ++ Y + L E++
Sbjct: 931 GLEEEQRQVKQDFDAKMSQAQSLLGQLNARTDKLAAVHKDVERYARDKRDRLLEECIENI 990
Query: 1005 QKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNL-------TLLE------- 1050
++ + + + ++ C I I + I + +L+ N+ +LE
Sbjct: 991 KQCKEHQGEATSRLQGCREAIKVIEKEINEAGASQTNLRENIRVRKLQKEILEIQAEIES 1050
Query: 1051 -------------------KKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKM 1091
+KE +LN+ +S L H TLE+ + ++
Sbjct: 1051 YDVEEAAKARRNFQDQWEKRKEKEERLNKSTHHLAGELSSLKSQHATLESDIKEF----- 1105
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+ +N++ Y ++ ++K+S++ SDL KY L+N ++KYH KM +N ++ W +
Sbjct: 1106 KDVNKM---YTEQLVKVKISDMANSDLEKYAKALDNAIMKYHGLKMEEVNDTMKHLWNKT 1162
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
YQG DID I I +DV G+ K R+YNYRVV K+ +E DMR RCSAGQ++LA +IIRL +
Sbjct: 1163 YQGTDIDGIKIKSDVEGGASK-RSYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRLAL 1221
Query: 1212 SDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD 1271
SD ++ DE A+D + ALAE+ +D
Sbjct: 1222 SDSFGQNCGILALDEP----TNALDTENI-------DALAESL---------------VD 1255
Query: 1272 IKNA-SDQKNFQLIVITHDEEFIENLTAID-RAYVVRIVRDHKGLSDI 1317
I N NFQLI+ITHDE F+ L D Y R+ RD + S I
Sbjct: 1256 IINERKSHSNFQLIIITHDENFLRKLGQSDVMEYYWRVSRDARQKSVI 1303
>gi|242213363|ref|XP_002472510.1| predicted protein [Postia placenta Mad-698-R]
gi|220728401|gb|EED82296.1| predicted protein [Postia placenta Mad-698-R]
Length = 1254
Score = 281 bits (719), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 355/1363 (26%), Positives = 611/1363 (44%), Gaps = 225/1363 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA +D+L + GIR+F + V+ F P+T+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASIDKLAVRGIRSFDDKQISVIEFFTPVTVIVGHNGSGKTTIIECLKYATTGDQPPNTR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKL+ N++ + VR+L
Sbjct: 61 GGA---------------------FIHDPKMANEKEVKAQVKLRFYAANHNRMLAVRNLS 99
Query: 121 LS-NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
++ KNG T ++ ++ G + + E E+ +L+GVSKA+L NVIFCH
Sbjct: 100 VTMKKNGALTMKTLESILALADEKKGKRGAISTKCAEMDAEIPHLLGVSKAVLENVIFCH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
QE+S WPL E +K+ FD+IF+ATKY KAL+SIK R E+ K Q+ K
Sbjct: 160 QEDSYWPLAEPSILKKKFDDIFEATKYTKALDSIKALRKDRAAELKAEKERLQSLSTEKA 219
Query: 240 EADSKKQLIYN---NTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
AD + + + ++ +E+L E + N K + K R + K
Sbjct: 220 HADKLRSRVSDLNATIASKEAEYEQLKRDYERLVTANAKFYESATKFRETYMKLDTLNEK 279
Query: 297 KT----ERDMIQESCNELE-SSIKQLFSGDKAELQSKL-NLFKINLDE---KCSELENQE 347
KT E + +E+ ++E ++I + G EL +L N K LD+ + SE+ Q
Sbjct: 280 KTRYQAELEDTRENVRDIEENTIINVIKGTDKELADRLKNFDKDLLDQQQKRKSEMYKQA 339
Query: 348 RLKSQYIQEEKQSHTHINEAQMKLGKLERDEETH-KKLNDTLKTKLNNLADTLCLDTTAK 406
++ I+ +Q+H + Q KLE + + H +++ D + L + +AK
Sbjct: 340 GIEDD-IRAVQQAHVSLVGEQ---AKLELELQAHEQQIRDR---------EALIREISAK 386
Query: 407 SQ-----YTPEEGEGLI----KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK 457
Q +TP E E ++ K+S+ L K+ T ++E++ V
Sbjct: 387 HQLKGYDHTPLEREKVLDFISKLSELRRRHNLETDKLQNDTAQSRVTEAESELDKASV-- 444
Query: 458 VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
L S++++ + +E + + + I N Q L TK + + D+L+ +
Sbjct: 445 --LASQLRTLQADMEDKARRVESTKADIKSGNFEQR-LAEANTKARNMEMKRDELTAEIR 501
Query: 518 PDQLKNEIEAWIR-QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL 576
L+ + A + +R EL+ + + + + + L + + E ++ +N+
Sbjct: 502 TLSLQADARARLDLKRAELKSKSSELKNTLDFNNNKFLKLIGTDARPDSMEQEVERVNIE 561
Query: 577 KERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSS 636
KER L D+ E N N K L + T ++ + I + L + + +
Sbjct: 562 KERE------LSDLESESNISN---KELQTGTANLE--AQGI----RRYVVLRLIICSFT 606
Query: 637 KTLRDQKRTLAELMDRMELVL----GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
TL L L +R++ L GS + L+ EL + E + T ++ + +
Sbjct: 607 DTLE-----LLALNERIKEALKQYEGSDTIDAALESAQDELNLRKGEQARGTDSKAVLD- 660
Query: 693 YIGKLEENEPR--CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR 750
G ++ + R CPLC R + E + +K H+ C+
Sbjct: 661 --GLMKRGKARKCCPLCARNMDD------------------RELSLFEKKHV-SWCQVLE 699
Query: 751 SLQELKP--VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEK-- 806
+Q+ P V EN +++ + +LR KL ++++++ E + T +T K E+
Sbjct: 700 EIQKYTPAAVQENKKEIRMWEEETLR-KLNDIKKDIKEISVLRQHAATVTQTQKDIERLN 758
Query: 807 -TALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNT 865
SL+ DL + + + LQ EL+ + S +R+T + +L +++ N T
Sbjct: 759 REIASLEADLATTG-STKTADDLQEELD---ALSSALRATDREKQNLLTERERLTNAFRT 814
Query: 866 FRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG----M 921
S++ S + R + +L+ + I + + + ++K L+ + + +G +
Sbjct: 815 HESELSSMRVRESELKSELREKTALEGRIKEWKADITNFSALVKDLDAKIADAQGPIDRL 874
Query: 922 DSVYQTELEELGRKVAPIE---TQLNLAQSELDALKK---------------EHKKKLNE 963
+S + EL ++ + LN++ +LD++ K E +K+ E
Sbjct: 875 ESQFHETQRELNANISQAQRTAQDLNMSADKLDSINKTIERYVRERRGRSLKECNEKIEE 934
Query: 964 EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCER 1023
A+IQ QLEEV R +++++ + +A LRE++ ++ + ++DI A +
Sbjct: 935 HEAEIQKLGLQLEEV-RNNIQLIDKGISESGATVANLRENL-RIRRLRQDIAATQA---- 988
Query: 1024 TINEINQSIANQSLEEIDLKNNL-----TLLEKKEAVAKLNEELKLSEIMISDLTKYHHT 1078
I+ I+ A ++ D K N+ T L+ K A + E+ + + L
Sbjct: 989 EIDSIDLEEAAKAKRIFDEKYNVEKQKETQLQSK--YAHIGGEISSLQAQLKTLQGDQDD 1046
Query: 1079 LENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMR 1138
++ KY Q LIR +K+S++ +DL KY L+N ++KYHS KM
Sbjct: 1047 FKDVSKKYRDQ-------LIR--------VKMSDMANNDLEKYAKALDNAIMKYHSLKME 1091
Query: 1139 SINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
+N +R W + YQG DID I I+++ G G +R+YNYRVV K+ +E DMR RCSAG
Sbjct: 1092 EVNDTMRHLWNKTYQGTDIDGIKISSE-GEGGATKRSYNYRVVMTKDQVEMDMRGRCSAG 1150
Query: 1199 QRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNC 1258
Q++LA +IIRL ALA++F +NC
Sbjct: 1151 QKMLASIIIRL---------------------------------------ALADSFGQNC 1171
Query: 1259 GIFALDEPTTNLDIKN-----AS---------DQKNFQLIVIT 1287
GI ALDEPT LD +N AS NFQLI+IT
Sbjct: 1172 GILALDEPTNALDTENIDALAASLVDIINERKSNSNFQLIIIT 1214
>gi|452983598|gb|EME83356.1| hypothetical protein MYCFIDRAFT_38930 [Pseudocercospora fijiensis
CIRAD86]
Length = 1304
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 332/1365 (24%), Positives = 619/1365 (45%), Gaps = 153/1365 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I G+R+F +RF+ PLTLIVG NG GKTTIIEC+K+ T E P +
Sbjct: 1 MSKIEKLSITGVRSFDHKAQMAIRFESPLTLIVGMNGSGKTTIIECLKYVTTGEMPPNSE 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G++FVHDP++ G+K E A VKLQ T + R++
Sbjct: 61 QGRSFVHDPKMA-------------------GEK-EVLAQVKLQYTSTEGMRMVTTRNMS 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L+ K GK + + TI K+ G + + + M +GVSKA+L NVIFCHQ
Sbjct: 101 LTVKQGKRTFKSLEGTI--KMARDGERSTVSSTVADINGMMPRYLGVSKAVLENVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEI---KAHYQATLNY 237
E S WP+ +K+ FDEIF+A KY KA+++IK+ + + E+ + + H + +
Sbjct: 159 EESLWPMMAPTDLKKKFDEIFEANKYTKAIDNIKVMQKNKKIELKNLELNEVHCKQNNDK 218
Query: 238 KKEADSKKQLIYNNTQK-RDQ--SF--EELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
KK +K L+ + RDQ +F + LH EE K K Q+ +V+ +
Sbjct: 219 KKNLKAKIDLMDKQCETLRDQESTFRAQRLH-AEEGYKDAANKFAQV-------NVVVGE 270
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQ 352
+ K++ R +E+ L ++ ++ D +LQ L+ + +L + LE Q++L
Sbjct: 271 LKNKRSARAAKEENVQGLRENLNEMSESDN-DLQRMLDEYDEHLRSFDANLEEQKKL--- 326
Query: 353 YIQEEKQ--SHTHINEAQMK-LGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
Y ++E + S ++ A++ +G+ E + +H++ + + A T + +
Sbjct: 327 YHKKEAEVTSSRNVQSAKVSAIGRFEEQKASHERQVEYRNRLIQESARTHEIRGYDRDID 386
Query: 410 TPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQ 469
+ + K+++TT D ++ + + ++ + +Q +N L + V + +S
Sbjct: 387 ERLAKDFMQKITRTTRDAQ-AEFERVRTQVQEDVSRQQKVLNDLNSDAVRFRQQKESSGF 445
Query: 470 QIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
QI + + + + +N ++S +++L S++ LD +IE+
Sbjct: 446 QISKYDEKIGEMQRRAQSLNSNESDKVTFESQLFDTQSKLATAKSELDSAPWNKQIESAD 505
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLF 588
+ L D +D+E + A+I L+ + + + + + H DR ++
Sbjct: 506 VELRRLADTREKLDSEREEAARRAKESAQIDYLREQLDDRHRRLGTMISAHGDRVREIVG 565
Query: 589 DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAE 648
D + + S ++AL ++ ++ Q+ + + L + + +L +K +
Sbjct: 566 DGWKPQTLEASYERALKNLDAEVADAQKQRDGSQTQADNLSSKLDELKSSLGAKKDEAKD 625
Query: 649 LMDRMELVLGSKP--FEDEL---DRVTLELKREQEEVSMMTSTQYLFNSYIGKLEE-NEP 702
+ + +G P F EL ++ ELK+E + +M+ Q F + I ++ +P
Sbjct: 626 AENDIYDAIGRAPKDFPSELAEREQTRDELKQEGDSFNMI---QSYFEAAIKMAKKPQKP 682
Query: 703 RCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKK-THIDQLCKQQRSLQELKPVYEN 761
C +CTR F S + +++++K + + +Q + +K T + +Q R + +E
Sbjct: 683 CCRMCTRPFASQAELQAMLDRVKLEQDNMTQQIDEQKITEAEAALEQARKVNAQFDTWE- 741
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
+L ++P++ + +E + + + + + ++++ SL + +
Sbjct: 742 --RLTQKEVPAVVKDIENIERKWKQANNDCESHSSFFQEAASRKQDVESLSKTVNTIVTL 799
Query: 822 IRELNTLQRELERQESK------ISGMRSTGVDLDQVLAQ---QKEKKNELNTFRSKIES 872
E + LQ+++E Q +K G + D+ ++ A+ Q+ ++E + R +
Sbjct: 800 SNEADALQKQVEEQAAKQKSQGLSRGFEAVQADIKKIDAESKAQQASRDEAASIRDRKTK 859
Query: 873 GQTRLNSHNEKLQS-LQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE 931
+ L +L+ LQ+ D+ + K LE+++ E + + S + +++E
Sbjct: 860 AVSDLELEASRLEGKLQQALYDLKQR-----------KDLENQEQEYKALKSQEREKIQE 908
Query: 932 LGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKR 991
K+ I +Q Q++ D + K K E+ + L ++ ++ +I Y +R
Sbjct: 909 FDAKLNEIASQTATEQAKYDDISKRGADKDREQQNRFNKLNNSLNKLSTVEADIQGYHER 968
Query: 992 GTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQ------SIANQSLEEIDLKNN 1045
G QL LN ++E +A V +R + E +Q + +QS + K N
Sbjct: 969 GGDQQL---------LNAKREKEVADADV-DRAVAEQSQIARNIKKLTDQSQSYAESKRN 1018
Query: 1046 LTLLEK----KEAVAKLNEELKLSEI--MISDLTKYHHTLENCVIK-------------- 1085
+T ++ + + +L++E++ E +D Y E K
Sbjct: 1019 ITDNQRYRRDRRQLQQLSDEIEELEKRNCEADAQTYQREAERWQRKRDEAAAQQAQVVGE 1078
Query: 1086 ---YHSQKMRSINRLIREYWTRIYQLKLSEIMIS-------DLTKYHHTLENCVIKYHSQ 1135
SQ SI R+Y T Q K + IM++ DL Y L+ +++YH+
Sbjct: 1079 LKGVDSQLQVSIAEFGRDYKTAGRQYKAAHIMVTTTKAAIQDLGAYGAALDKAIMQYHTL 1138
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRC 1195
KM IN +I E W + Y G D+D I I ++ T + + YNYRVV K E DMR RC
Sbjct: 1139 KMEQINGIIDELWRKTYMGTDVDTIMIRSENET-VKSTKNYNYRVVMVKQDTEMDMRGRC 1197
Query: 1196 SAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFS 1255
SAGQ+VLA +IIR+ +++ + VI DE T +D V + +ALA + S
Sbjct: 1198 SAGQKVLASIIIRMALAECFGIRCGVIALDEP----TTNLD-------VDNIRALALSLS 1246
Query: 1256 RNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
A+ IK Q NFQLI+ITHDE+F+ + D
Sbjct: 1247 ------AI--------IKERKKQANFQLIIITHDEDFLREMRCDD 1277
>gi|255563610|ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
gi|223538045|gb|EEF39658.1| DNA repair protein RAD50, putative [Ricinus communis]
Length = 1256
Score = 278 bits (711), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 348/1379 (25%), Positives = 623/1379 (45%), Gaps = 244/1379 (17%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F+HDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHSFIHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ ++WPL + +K+ FD+IF AT+Y KALE IK +EI K + K
Sbjct: 160 QDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
A ++ I + ++ + S ++ +E ++ ++ K+ Q+ +++ + + TK E
Sbjct: 220 SAYKLRESITQDEERTESSKVQIQALENKVQNVDVKIHQIQTTLKDLRNLQEKIMTKTVE 279
Query: 300 -RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELE----------NQER 348
R + +E + E+ + + L +K DEK +++E N
Sbjct: 280 RRTLFKEQQRQYEA-----LEEENEDPDEDLMEWKTKFDEKVAQMESSISKLKREKNDTE 334
Query: 349 LKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQ 408
+K+ +++E +I E ++ +L+ + E H L + + + L L + ++
Sbjct: 335 IKTSFLKE------NITEYIREISRLQTEAEAHNSLKNERDSTIQKLCARHNLGSLPQAP 388
Query: 409 YTPEEGEGL---IKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIK 465
+ + L +K T + K L D K S++ K AE L ++ + K
Sbjct: 389 LSDDIALNLTNRLKSRLTDLRKDLQDKKT-----SNDTEVKTAEDCYL-----DVNDRWK 438
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSL------DP 518
Q + K+++ N I ++ + + + + +++ VN S ID+ K++
Sbjct: 439 HIDAQKQA-KREIKNGI--LDRITKKEHDRASFEEEISHVNLSHIDEREKNMRIEVERKT 495
Query: 519 DQL-KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN--- 574
+QL + E+ IRQ+ + EL I+ EI L + LA + + K AD+
Sbjct: 496 NQLAERAFESNIRQK---QTELYGIEQEIKALDGEKDILAIYSEDRVKLSLKKADLENHK 552
Query: 575 -----LLKERHDRAFHLLFDMIP-EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTL 628
++ E DR +L +P +++ K + +AL ++ + + + + EK + L
Sbjct: 553 KKHKKIIDEHKDRIRGVLKGRVPSDKDMKKEITQALRALAVEFDDLNSKSHEAEKEVNVL 612
Query: 629 EA-------NVSNSSKTLRDQKRTLA---ELMDRMEL-------VLGSKPFEDELDRVTL 671
+ N+S K + +KR + +D+ L VLGS + ++
Sbjct: 613 QMKIQEVNNNLSKLRKDMDSRKRFIESKLHSLDQQSLTVDCYLKVLGSAKDKRDV----- 667
Query: 672 ELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTK---- 727
++ + ++ + +F+ + ++ CP C R F ++ V K + K
Sbjct: 668 ----QKSKYNIADGMRQMFDPF-ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASS 721
Query: 728 ---IKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENV 784
+K + +++N ++ QL K L+ +YE +K++ IP L +L E +
Sbjct: 722 AEHMKVLAAESSNADSNFQQLDK-------LRMLYEEFVKIEKETIPLAEKNLHDLTEEL 774
Query: 785 IETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS 844
+ L + L K + + +L + D+ +E+ T Q++++ E K+ R
Sbjct: 775 DQKSQALDDVLGVLAQIKADKDSVEALVQPVETADRLYQEIQTWQKQVDDLEYKLDIQRQ 834
Query: 845 TGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQK-QKNDIH----SKQL 899
G ++++ +EL++ + E+ L++ EKL+ ++ +ND+ + L
Sbjct: 835 GGRSMEEI-------HSELSSLQDTKEA----LHNELEKLRDERRYMENDLSHIXXNTLL 883
Query: 900 TVQGGAGMLKSLEDRKCELEGMDSVYQTELEE--LGRKVAPIETQLNLAQSELDALKKEH 957
V+ L+ L + K Q EL+E L + P+ + +S LK +
Sbjct: 884 NVKKAEEELEHLIEEK---------NQVELDEKHLAEALVPLSKEREKLRSYNSELKVKL 934
Query: 958 KKKLNEEGAKIQDYTKQLEEVKRIKLEILNYT---KRGTLTQ----LAALRESVQKLNQR 1010
+++L E+ ++ Y ++ + +I +I Y KR L + L+ L +Q + R
Sbjct: 935 EQELEEQKKELDSYQWDVDTLLKINSKIKEYNDLKKRERLKEMQEKLSLLESQLQSCDDR 994
Query: 1011 KEDIIAKRGVCERTINEINQSIANQSLEEI--DLKNNLTLLEKKEAVAKLNEE------- 1061
K++I+ + CE ANQ+ E + +++NL + K V KL +E
Sbjct: 995 KKEILDELNKCEN---------ANQNQESLYRKIQDNLNYRKTKAEVDKLTQEIESLEEE 1045
Query: 1062 -----------------LKLSEIMISDLTK-------YHHTLENCVIKYHSQKMRSINRL 1097
L+ E ++S+L K Y + + + + I+
Sbjct: 1046 MLKIGGVSTFEGELARHLQERESLLSELNKCRGTMSVYQSNISKNKVDLKQAQYKDID-- 1103
Query: 1098 IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
+ Y+ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W + Y+G DI
Sbjct: 1104 -KRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDI 1162
Query: 1158 DYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKN 1216
DYISI +D G G+ R+Y+Y+VV + E +MR RCSAGQ+VLA LIIRL
Sbjct: 1163 DYISIHSDSEGAGT---RSYSYKVVMQTGDAELEMRGRCSAGQKVLASLIIRL------- 1212
Query: 1217 FQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA 1275
ALAETF NCGI ALDEPTTNLD NA
Sbjct: 1213 --------------------------------ALAETFCLNCGILALDEPTTNLDGPNA 1239
>gi|363747924|ref|XP_003644180.1| hypothetical protein Ecym_1108 [Eremothecium cymbalariae DBVPG#7215]
gi|356887812|gb|AET37363.1| hypothetical protein Ecym_1108 [Eremothecium cymbalariae DBVPG#7215]
Length = 1298
Score = 276 bits (706), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 359/1366 (26%), Positives = 620/1366 (45%), Gaps = 226/1366 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + L I GIR+F A V++F +PLTLIVG NGCGKTTIIEC+K+A T + P +
Sbjct: 1 MSAIHNLSIQGIRSFDARDKEVIKFGKPLTLIVGANGCGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G F+HDP+I + + A VKL T N + V R++
Sbjct: 61 NGA---------------------FIHDPKINGEVDVRAQVKLAFTNANGVQMVVTRNIQ 99
Query: 121 LSNKNGKDNCATRDTTISR--KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L K T + + K T + L Q+ L +GV KAIL+ VIFC
Sbjct: 100 LMKKRSTATFKTLEGQLVSINKGERTTLSTRAADLDQQVPL----YLGVPKAILDYVIFC 155
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNY 237
HQE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +I+ Q+ +
Sbjct: 156 HQEDSLWPLSEPANLKKRFDEIFQAMKFTKALDNLK----SIKKDMAVDIRLLKQSVEHL 211
Query: 238 KKEADSKKQLIYNNTQKRD--QSFEE-LHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K + D + + + ++ D +S++ L +E +K I E+ +L + + + ++
Sbjct: 212 KTDRDRSRAIALSISELEDKTESYKATLPVLEAQLKDITEQSDKLFKSNQEFQQVLSKLD 271
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEK---CSELENQERLKS 351
K R+ + LE SI+ L + ELQ L+ F +DEK S+LE+
Sbjct: 272 NLKHSRESVANQIKRLEESIEPL-DMSRDELQQLLDNFSSAVDEKRDVVSKLEDD----L 326
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLA--DTLCLDTTAKSQY 409
+ E+ Q I E+ + H L+ + +NNL + L AK ++
Sbjct: 327 SNVDEKLQRLRGIRESMIS---------EHAVLSSNKEKYVNNLKLHEELSAKLVAKYKF 377
Query: 410 TP----EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVEL---ES 462
+ + + L+ ++ + K D ++ E D K+ N L+ E+ +L ES
Sbjct: 378 SGVDILHDMKLLVLDTEKAVSKAREDNRLREEGCQDLLAKKR---NTLVKEEQKLSYTES 434
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
K+Q+ D NV ++ + Q++S L+V + L + S +D + + +Q
Sbjct: 435 DATKLKEQL-----DALNV--RLTSIEQTESDLKVSKEDLEKYKSLVDTWRQDKNFEQFN 487
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKN--RKESKLADINLLKERH 580
+I+A + LE E+ + +IS + LA+ LK+ + + K D ++LK
Sbjct: 488 KDIKAKNDEMLILEHEVENVQNQISKTNQHSDLLAKYSMLKSSIQDKKKELDSSILKIEG 547
Query: 581 DRAFHLL-------FDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVS 633
D++ LL F++ ++N+ N L K ++S + R + +AK + +
Sbjct: 548 DKSSQLLGMEVTDDFELDLKKNYIN-LQKQIASSS----RSNREASAK---CTEFQIELR 599
Query: 634 NSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSM----MTSTQYL 689
++ K L + + +L +++ L DE D V LE E VS+ M T
Sbjct: 600 SAEKELNQLNKKVLDLREKLANELPEDCSIDEYDEVLLE-SEESYRVSLENLKMHRTTLE 658
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ 749
FN ++ EN+ C LC R F++D L+ +L +K K EQT L K+
Sbjct: 659 FNLKALEIAENDHCCYLCQRKFQNDVEKANLLEELHSKTKSDFEQT---------LIKE- 708
Query: 750 RSLQELKPVYENIMKLQDTDIPSLR---SKLIELEENVIETKGELKKLKTALETPKTK-- 804
+Q+ K Y ++ KL+ DI +LR SK+ +ENV + K K +E ++
Sbjct: 709 --VQDQKEYYFSLRKLE-KDIIALREVESKVKLAQENVSQWKVVHHNSKLNMELADSEHN 765
Query: 805 ---------EKTALSLQGDLTLLDQNIRELNTLQRELERQESKIS--GMRSTGVD-LDQV 852
E+T + D+ L +ELN + + R E ++S S GV +D+
Sbjct: 766 RLKEAQDHFERTLKPIVNDVIRLR---KELNQSEADCSRIEEELSIYSEHSNGVQTIDEF 822
Query: 853 LAQQKEKKNELNTFRSKI----ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGML 908
+QK L R +I E + +N L ++++ ++ + ++ +
Sbjct: 823 QLKQKNINGRLRLLRKEIGKLQEEKENSSTEYNNLLNLVREKTFKVNYIEKKLEEKRHIQ 882
Query: 909 KSLEDRKCELEGMDSVY---QTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEG 965
K ++D + +DSV Q ++ L ++ +E L + E L+++ L E
Sbjct: 883 KDIDDIASKYGNVDSVVLEIQKIIDGLNSEIGVLEKSLEEVRIENRKLEQQQDLNLTELK 942
Query: 966 AKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTI 1025
+ + +EE+K +++ + +L + S+Q N+ + + K +
Sbjct: 943 SNFGVFNSIVEEIKAFEID--------GIKKLEDVESSLQDCNEEIDTLSHK-------V 987
Query: 1026 NEINQSIANQS-------LEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHT 1078
NE+NQ I ++S E+ ++K N+ L++ K +A++ E + + ++ + +
Sbjct: 988 NELNQKIISESQKLKDSTSEQKNMKLNIDLIDLKGRLAQIGEHILNLDSQNAEAERDRYQ 1047
Query: 1079 LENCVIKYHSQKMRSIN-------------------RLIREY----------WTRIYQLK 1109
E+ +++ +K+ S N +L EY W R L+
Sbjct: 1048 QESTRLRFMFEKLSSENAGKLGEIKQLQNQISSLTKQLQTEYKDVDINYQNEWAR---LQ 1104
Query: 1110 LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTG 1169
++ D+ Y L++ ++KYH KM INR+I E W R Y G D+D I I +D +
Sbjct: 1105 TKTLVADDIDTYSKVLDSAIMKYHRLKMEDINRIIDELWKRTYSGTDVDTIKIKSDELSN 1164
Query: 1170 SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------- 1213
+ K ++YNYRVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1165 NNKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGINCGVIALDEPTT 1224
Query: 1214 -----------------------QKNFQLIVITHDEEFIENLTAID 1236
QKNFQLIVITHDE+F+ ++ A++
Sbjct: 1225 NLDEDNIASLARSLSNILEVRRHQKNFQLIVITHDEKFLSHMNAVN 1270
>gi|281211350|gb|EFA85515.1| DNA recombination/repair protein [Polysphondylium pallidum PN500]
Length = 1301
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 348/1354 (25%), Positives = 607/1354 (44%), Gaps = 176/1354 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +++L + GIR+F +++ V+ F +PLTLIVG NG GKTTIIEC+K+A T E P S
Sbjct: 1 MTSIEKLLVQGIRSFDPNESSVIDFYKPLTLIVGVNGAGKTTIIECLKYASTGEMPPNCS 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
SG+ F+HDP+I E A +K++ N + RSL
Sbjct: 61 SGQAFIHDPKIAGNSEVKAQ--------------------IKMRFKNPNGKPIVATRSLC 100
Query: 120 LLSNKNGKDNCATRDTTI-SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ N K D ++ S V K+ C + E+ L+GV+K IL NVIFC
Sbjct: 101 LVQRANNKQEFRQMDASLQSFNSEGQKVSKSFRCSDLDK--EIPELMGVAKPILKNVIFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK---------IQRDRLRKEIPEIKA 229
HQE S WPL E K+K FDEIF A +Y KAL+SIK I+ RL+ E+
Sbjct: 159 HQEESLWPLSESAKLKVKFDEIFSAVRYTKALKSIKDKKKEVSTQIKESRLKLEVVTTNR 218
Query: 230 HYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVM 289
+ +N + A +++ + +T K Q+ +L + I K+ Q+ + + M
Sbjct: 219 EHSNRINKEIAAMNQQLVTLKDTLK--QTASQLKEKRQQYDLITAKVTQVDAAVQEVRAM 276
Query: 290 STQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERL 349
+ +K E ++++ + + S + ++F AEL N F+ DE L+ Q+ L
Sbjct: 277 ----EVRKVE---MEKARDRMYSGLTEVFDESDAELVFMTNSFQ---DEVNQMLQAQKEL 326
Query: 350 KSQY--IQEEKQS-HTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAK 406
+Q E+ + N +++GKL + + ++L +L LA L
Sbjct: 327 SDNLAKLQTERDTLAAKKNSNSIEMGKLGQLLKMAEELAGNRDKQLAELASRYNL----- 381
Query: 407 SQYTPEEGEGLIKMSQTTIDKYLSDIKIL----ERTFSDNENTKQAEINALIVEKVELES 462
Y P + + +++ ++ K L+DI + + F + ++ N +EK +LE
Sbjct: 382 -TYEPGKSQDVVE----SLTKKLNDISAVILANQDRFKQQISEAESAANESNIEKKQLEE 436
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+I + N + L + + +V + S I++L
Sbjct: 437 RINQLDSNLNANMRKLEQIDAEKKKVLSLSENANQYHQAIAESESTIEKLESDFQLAGYD 496
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITL--AEIKSLKNRKESKLADIN-LLKER 579
+I++ I+QR EL E+ + SI QA + L + + +N +K A I+ L
Sbjct: 497 EKIKSMIQQRKEL--EMSIEQKRTSITQANQMALQRSSLTFKQNELRTKQACISEYLVNN 554
Query: 580 HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
LL EN + L S+ D +E+ N L E N K +
Sbjct: 555 KAMLDDLLNGEYTAENLSSKLRDLGMSLESDSKERREESNDVNTQLIKSE----NELKIV 610
Query: 640 RDQKRTLAELMDRMELVLG-------SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
+K + ++++ + LG +D + ++ L + Q+ ++++ S L+
Sbjct: 611 IREKNAKIQQLEKLGVQLGKLDSAIVGDNIDDSIKTLSNRLLQLQKSLAILESEDVLYKE 670
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQ----TNNKKTHIDQLCKQ 748
YI K N+ C LC D + ++KL++ IP++ T KT D L
Sbjct: 671 YIEK-ANNQKECSLCQNQMNDD-DLHSFIHKLESHTDGIPDKLATLTKEIKTTKDNL--- 725
Query: 749 QRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTA 808
L KP+YE +KL+ +IP L + ++++ + E+ L K +E +
Sbjct: 726 -EILTANKPMYELQIKLKQEEIPMLEKREQDIQQTLTES---LLPFKKTIEESQQLLDNK 781
Query: 809 LSLQGDLTLLDQNIR----ELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELN 864
+ + L+ ++ E + E+E+QE ++ G+ + ++Q+ + + K++ +
Sbjct: 782 MKKLNQMVLVASSVNMLCVETKKIVAEVEQQE-QLLGVSGGALSVEQLNQEYDQLKSKSD 840
Query: 865 TFRSKIE-----SGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELE 919
+ + +IE S + R S +LQ + Q ++ SK G +++ L+ + EL
Sbjct: 841 SIQKEIERLTVDSKKNR--SELNRLQQIVIQNRELLSK---ASGQTEIVEHLKQSEKELR 895
Query: 920 GMD-------SVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKK---LNEEGAKIQ 969
++ S + +LE + K QLN + +L++ + K+ + + + I+
Sbjct: 896 AINEDLIAKLSDFTQQLEGITAKSVEFSGQLNSLREQLESESSKMTKEKTIFSNKLSAIK 955
Query: 970 DYTKQLEE---VKRIKLEILNYTKRGTLTQLAALRE----SVQKLNQRKEDIIAKRGVCE 1022
+ +Q+ K+ KLE L + R + ++ E V +Q K D +A+ + +
Sbjct: 956 NLQQQIPSDLLEKQEKLESLAMSNREIDINIDSINEDYSKGVAHTDQIKND-LAQSEITK 1014
Query: 1023 RTINE----INQSIANQSLEEIDLKNNLTL-----LEKKEAVAKLNEELKLSEIMISDLT 1073
R I++ Q + +SL + K NL++ E++ + L ++ L + I +
Sbjct: 1015 RVISDNLGYRQQKLNCESLSKEITKKNLSINSIITPEEQSLLKSLTADINLLKSKIDKSS 1074
Query: 1074 KYHHTLENCVIKYHSQKMRSI-NRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKY 1132
+E + ++ + I N + Y + Q + E++ DL KY+ L+ ++KY
Sbjct: 1075 GQVEAIEQHIRTAQTELAKPIYNSVETVYRDLLVQAETLELINKDLDKYYKALDKALMKY 1134
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMR 1192
H KM IN+ IRE WT Y+GNDID I I +D T ++K NYRVV K +E DMR
Sbjct: 1135 HVLKMDEINKTIRELWTATYRGNDIDTIEIRSDESTTAKK--VINYRVVMLKGDVELDMR 1192
Query: 1193 NRCSAGQRVLACLIIRLFISD--------------------------------------- 1213
RCSAGQ+VLACL+IRL +++
Sbjct: 1193 GRCSAGQKVLACLVIRLALAENFCTNCGILALDEPTSNLDRANIESFATALLNIIEAKKT 1252
Query: 1214 QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
Q FQLI+ITHDEEF++ L + A Y R+ +D
Sbjct: 1253 QSGFQLIIITHDEEFVQYLGRGNFADYYWRVTKD 1286
>gi|317026241|ref|XP_001389243.2| DNA repair protein Rad50 [Aspergillus niger CBS 513.88]
Length = 1342
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 314/1345 (23%), Positives = 602/1345 (44%), Gaps = 157/1345 (11%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 30 AKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--- 86
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLL 121
S G F+HDP++ + E A VKL + + RSL L
Sbjct: 87 ------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVATRSLQL 128
Query: 122 SNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQE 181
+ K T + + + G + ++ E M +GVSKAIL++VIFCHQ+
Sbjct: 129 TVKKTTRQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQD 186
Query: 182 NSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEA 241
S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++A
Sbjct: 187 ESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKA 246
Query: 242 DSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERD 301
D ++ + + EE H + + M+ + E + ++ + S + + K+ E
Sbjct: 247 DRAEKRSIKLQDEIEALREETHQLSQEMRRVAELADKAWKESESYSQVLGALEGKRIEAK 306
Query: 302 MIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK--- 358
IQ + + L+ + +L D+ LQS L F + + + + QE K + E K
Sbjct: 307 SIQTTIDNLKRHLVELDDSDEW-LQSNLEQF----ESRQLQYQQQEEAKKENYMELKEQI 361
Query: 359 -QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGL 417
Q+ + Q + GK E D+ ++ + + +A + + E +
Sbjct: 362 EQTRQRLGVKQAEYGKFENDKANFERQVERRQRMTKEVARAHNI-----RGFDNVEDQAD 416
Query: 418 IKMSQTTIDKYLSDI-KILERTFSDNEN---TKQAEINALIVEKVELESKIKSFKQQIEG 473
+ + K L D ++LER + ++ QA +N + +K L+ + K+QI
Sbjct: 417 VDEFMRRVRKILKDQNQVLERVKKEAQSELRDVQATLNQIGQQKSALQESKNAAKRQIAS 476
Query: 474 NKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
N ++ ++NE+N + L++ + + S +DQ + EI+ Q
Sbjct: 477 NDREAATYQGKLNEINVDEGVQAALESNIEDIGSRLDQAKQRARSASWDKEIQNVNSQIR 536
Query: 534 ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDMIP 592
+LEDE +++E+ + LA + LK + + + +K H +R +
Sbjct: 537 DLEDESSRLNSELIEATKKAGDLARLDHLKKELKERERSLETMKGAHGERLMKFVNANWS 596
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
E+ + + + ++R + + + + L +E + KTL +++ L E +
Sbjct: 597 PESLEQDYQHVIEEESRHVSRAERERDGVSRELEQVEFKMKGVRKTLSQRQKELKECIKE 656
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEE---NEPRCPLCT 708
+ + +P +E + L+ ++ Q +++ + QY + Y+ E + C LC
Sbjct: 657 IRDAVDDEP--EEYPEI-LKERQAQLDLARKDAEQYAGVSKYMADCLETVKSANMCRLCM 713
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT 768
R F ++ + NKL+ +K + I +L + + +E Y+ +L+ T
Sbjct: 714 RTFRTENELQTFRNKLEGLVKRAKRVMED--DDIPRLEEDLNTAREASTAYDAWCRLKQT 771
Query: 769 DIPSLRSK-----------LIELEEN--VIETKGELKKLKTALETPKTKEKTALSLQGDL 815
+IP L + L +LEEN ++ K + KK +E+ T + ++
Sbjct: 772 EIPDLEKEEEEYIAQQDKLLSQLEENDKIVSEKADKKK---DVESLSKTVNTIVRYDSEI 828
Query: 816 TLLDQNIRELNTLQ------RELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSK 869
+ ++EL+T Q R LE + +I+G+ L + L++ +K + + +K
Sbjct: 829 KAIRSQVQELSTKQQDTNASRTLEDIQDEIAGIGEKSRALKKTLSKLTHEKEQTLSEMNK 888
Query: 870 IESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTEL 929
+E LQ L+ K+++ + + ++ A +L +E E + +++ + +
Sbjct: 889 LE------------LQ-LRDVKSNLDNVKFKLERKADLLARIE----EYKNLNNQQREAI 931
Query: 930 EELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYT 989
+ +++ + +L Q++ D + + + + + +I + + +++ EI Y
Sbjct: 932 AKADKEIEDLTPELLKVQAKYDDISQRAEARERDMQQEISHLYENIHQLELANEEIDAYN 991
Query: 990 KRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLL 1049
+RG QL + +Q + ++ ++ + IN+I+ + + + +NLT
Sbjct: 992 ERGGPHQLERSKRELQSIENEISNLEVEQANITKDINKISAQLKDSENTKRQYADNLTYR 1051
Query: 1050 EKKEAVAKLNEELK--LSEIMISDLTKYHHTLE------NCVIKYHSQKMRSI----NRL 1097
+ ++ ++ EE++ ++ D +++ E N + + KM + ++L
Sbjct: 1052 QATRSLDEVTEEIEQLAAQNAEVDRSRFKEESERRAREHNALAAKQASKMGEMKSKDDQL 1111
Query: 1098 IR--EYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1143
++ W Y+ ++ ++ + DL +Y L+ ++KYH KM IN +
Sbjct: 1112 MQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAI 1171
Query: 1144 IREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLA 1203
I E W + Y+G D+D I I +D ++ R+YNYRV K G E DMR RCSAGQ+VLA
Sbjct: 1172 ISELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLA 1230
Query: 1204 CLIIRLFISD---------------------------------------QKNFQLIVITH 1224
+IIRL +++ Q NFQLIVITH
Sbjct: 1231 SIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITH 1290
Query: 1225 DEEFIENLTAIDRA-YVVRIVRDHK 1248
DEEF+ ++ D + Y R+ R+ K
Sbjct: 1291 DEEFLRHMQCGDFSDYYYRVSRNEK 1315
>gi|366986523|ref|XP_003673028.1| hypothetical protein NCAS_0A00770 [Naumovozyma castellii CBS 4309]
gi|342298891|emb|CCC66637.1| hypothetical protein NCAS_0A00770 [Naumovozyma castellii CBS 4309]
Length = 1304
Score = 275 bits (703), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 364/1362 (26%), Positives = 616/1362 (45%), Gaps = 216/1362 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGSNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP+I + + A VKL T N T+ V R++
Sbjct: 59 -------------------SKGGVFVHDPKITGEKDIRAQVKLAFTSANGITMIVTRNIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L K + T + ++ I G + L E ++ +GV KAIL VIFCHQ
Sbjct: 100 LLAKKTTNTFKTLEGQLA-AINQNGDRTTLSTRSIELDTQVPLYLGVPKAILEYVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRLRKEIPEIKAHYQATLNYKK 239
E+S WPL E +K+ FDEIF A K+ KA++++K I++D +IK Q+ + +
Sbjct: 159 EDSLWPLSEPSNLKKKFDEIFQAMKFTKAIDNLKAIKKDM----TVDIKLLKQSVEHLRV 214
Query: 240 EADSKKQLIYNNTQKRDQSFE---ELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ D + N Q + Q E ++ ++E ++ I E+ +L + + + ++ Q
Sbjct: 215 DRDRSRGTKMNIVQLQAQIDEYQMKVKDVEIELQKITEQSDKLFKSNQEFQQVLSKIQNL 274
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ ++E + +S+ +L S K EL+ L F + DE E++ E ++
Sbjct: 275 RMLDKHLKEEIENVSNSV-ELISLPKQELEELLANFSKSFDENEQEVKKIEVEIDILKRD 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTA-KSQYTPEEGE 415
QS + K+G+L+ EE +KK TL++ +D L K Q E+ +
Sbjct: 334 ANQSQSKYTGLVRKMGELQAREEAYKKNVITLESLSMAFSDRYNLGYVGNKPQEFFEKSK 393
Query: 416 GLIKMSQTTIDKYLSD----IKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
T+ + + +K LE S+ N++ + L K + +Q+I
Sbjct: 394 KFNDDLNTSFSNFEKESRNRLKSLENELSEITNSETIQNQRLEYSKAD--------QQKI 445
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
+ LT+ +T INE + S L+ + KLN+ N ++ S + D + ++ + +++
Sbjct: 446 SAEIEKLTSELT-INEF--THSDLEAAKAKLNQYNEKL----TSWENDDIITKLNSTLKE 498
Query: 532 RNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADINLLKER---HD 581
+N D++ + ++++ +Q Q A++ +K + KL + + E+ +
Sbjct: 499 KN---DQMIIAESDLQQIQERIMKTNQQADLFAKLALIKGSLKEKLHSLEKVTEKVTNDE 555
Query: 582 RAFHLLFDMIPEE---NFKNSLDKALSSITFDINRIQEDI-----NAKEKHLYTLEANV- 632
RA + +P++ +FK F IN +Q++I N EK EAN+
Sbjct: 556 RARNWKL-TVPDDLDMDFKR----------FYIN-LQKEIAVNNKNIHEKDKSYTEANIK 603
Query: 633 -SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-- 689
+N+ K + + K T L+ ++ L DE D V LE E+S T+ + L
Sbjct: 604 LTNAQKEIENSKETEQRLITALQSALPEDCSIDEYDEVVLET-----ELSYKTALENLKM 658
Query: 690 ------FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHID 743
FN ++ E + C LC+R FE+ L+ +LK K N + T D
Sbjct: 659 HQTTLEFNRKALEIAERDSCCYLCSRKFETADFKSKLLQELKAKT-----DANFETTLKD 713
Query: 744 QLCKQQRSLQELKPVYENIMKLQDTDIPS--LRSKLIELEENVIETKGELKKLKTALETP 801
+ +++ L L+ + +++KL T S L + L L E+V K EL K++
Sbjct: 714 TVKEEKEYLDSLRALERDVIKLHSTQTNSKNLGNGLTSLVEHVSSLKKELAKVEEIGNGL 773
Query: 802 KTK----EKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVD-LDQVLAQQ 856
K EK L + L + R+L ++L +E +I G GV +D++ QQ
Sbjct: 774 KEDRDHCEKVLRPLVDQVAQLRKETRDLEKESQDLS-EELQIYGDSDGGVQTVDELNQQQ 832
Query: 857 KEKKNELNTFRSKIESGQ----TRLNSH--------------NEKLQSLQKQKN---DIH 895
++K N + R I+ Q +++ H NE + LQ+++N D+H
Sbjct: 833 QDKNNFMRQLRKDIQDLQNERESKMREHSTLLNVIKDRNLKINEIERVLQRKQNIDDDLH 892
Query: 896 SKQ-------LTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
SK L +Q L L ++K EL V E+E ++ L S
Sbjct: 893 SKNAELKEILLRIQTLKTELIELRNKKQELS---KVLNNEMERFSGEMEAKRKNLGSITS 949
Query: 949 ELDALK--KEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQK 1006
LD + K+ + + GAK D ++E + I+ EI TK + Q
Sbjct: 950 YLDRISNLKQEVSEFDNSGAK--DLGMCIQESEDIQKEIAYITKDIEVKQ--------NH 999
Query: 1007 LNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN----EEL 1062
LN +K+ + K E+ E N +AN + + +N+++ L+ + A A+ + E L
Sbjct: 1000 LNSKKDKL--KDSSNEKRNLEQNIHLANLRAKLKETENDISRLDIQNAEAERDKYQQESL 1057
Query: 1063 KLSEIM----------ISDLTKYHHTLENCVIKYHSQKMRSINRLIRE-YWTRIYQLKLS 1111
+L + + ++ + +++ SQ++RS + + E Y L+
Sbjct: 1058 RLRNLFEKLSAENAGKLGEIKQLQSQVDSL-----SQQLRSDYKDVDEKYHKEWVSLQTR 1112
Query: 1112 EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE 1171
+ D+ Y L++ +++YH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1113 TFVTDDIDTYSKALDSAIMRYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTV 1172
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------ 1213
+ ++YNYRVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1173 RGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGINCGVIALDEPTTNL 1232
Query: 1214 ---------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1233 DEENIESLAKSLSNIIEMRRHQKNFQLIVITHDEKFLNHMNA 1274
>gi|212542011|ref|XP_002151160.1| DNA repair protein Rad50 [Talaromyces marneffei ATCC 18224]
gi|210066067|gb|EEA20160.1| DNA repair protein Rad50 [Talaromyces marneffei ATCC 18224]
Length = 1329
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 321/1368 (23%), Positives = 613/1368 (44%), Gaps = 208/1368 (15%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 33 IDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGELPPN----- 87
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
S G F+HDP++ E A VKL + + RSL L+
Sbjct: 88 ----------------SKGGAFIHDPKLCGDKEVLAQVKLAFKATSGAKMVATRSLQLTV 131
Query: 124 KNGKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
K + T+ ++ T + + L Q M +GVSKAIL++VIF
Sbjct: 132 KK----TTRQQKTLEGQLLMVKDGERTAISSRVAELDQI----MPQYLGVSKAILDSVIF 183
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q +
Sbjct: 184 CHQDESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKFKIMEQHSKED 243
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
K +AD ++ ++ + EE H I + M+ + + ++ + + + + K+
Sbjct: 244 KDKADRAEKRSIKLQEEIEALREETHRISQEMRNAADLADKAWKESESYAQVIGTLEGKR 303
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY---- 353
E +Q + + L+ + ++ D+ LQS L F + +LE Q++ +Q
Sbjct: 304 IEARSVQSTIDNLKRHLVEVDESDEW-LQSTLEQF------ESRQLEYQQQEDAQKERYM 356
Query: 354 -IQEEKQSH-THINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
I+E+ +S+ + Q ++GK E D++ ++ + + A + + P
Sbjct: 357 DIKEQIESNRDQLGLKQAEVGKYENDKDQFERQIGRRENMIKEFARENNIRGFDDTLDEP 416
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNEN---TKQAEINALIVEKVELESKIKSFK 468
+ E + +M Q + ++ + LER + ++ Q +N + K + +
Sbjct: 417 KIDEFMRRM-QKMVKEH---TQALERARKEGQSEVRETQNVLNQIAQRKSAFKEAKNVAR 472
Query: 469 QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAW 528
+QI N K+ +V +++NE++ + T+ VL+++ V S +++L + +++
Sbjct: 473 RQISDNDKEAASVQSRLNEIDVDEGTVAVLESQKEEVQSRLERLKDVARGAKWDKDLQDA 532
Query: 529 IRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLL 587
+ LEDE ++ E+ + LA + +K + + + + H DR L+
Sbjct: 533 NTELRSLEDESTKLNQELIAGTKKAGDLARLAHMKKELKDRERQLETMSGAHGDRLSQLV 592
Query: 588 FDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLA 647
+N + ++ + + + + + + L +E + + TL +K+
Sbjct: 593 SAQWSPDNLEREYQNVVADVANSMTLAERNRDGIGRELDQVEFKLKDCRATLEKRKKERD 652
Query: 648 ELMDRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCP 705
+ + ++ + P E D L + + +++V FN + L++ + C
Sbjct: 653 QCLKKIRDAIDDDPTEYLDILQTRQNHMDQTRKDVEQFAGMHGYFNMCLDALDQKKM-CR 711
Query: 706 LCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV---YENI 762
C R F+++ + N+L+ IK+ N + + L + + + + V Y+
Sbjct: 712 TCMRPFKNETEMRTFKNRLEGLIKK------NFSSSDEDLKQAEEDYENARMVNTDYDTW 765
Query: 763 MKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNI 822
++L +T IP ELE+N + +G+ KE+ L+ T +D+
Sbjct: 766 LRLTETAIP-------ELEKNEEQFQGQ-------------KEEILKKLESHDTTVDERA 805
Query: 823 ---RELNTLQR---ELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTR 876
RE+ +L R + R + +I +RS + +VL++Q + F +E Q
Sbjct: 806 EKKREIESLSRTVTSIVRIDGEIKSLRSQ---IAEVLSEQPQ-----GDFSRVLEDIQND 857
Query: 877 LNSHNEKLQSLQ-----------KQKNDIHSKQLT---VQGG-----------AGMLKSL 911
+ + EK ++++ + ++D++ +L VQG G+L +
Sbjct: 858 IAAIGEKSRAIKLTISKLSSEKDQSRDDLNKAELALRDVQGSLANASHELEKKTGLLARV 917
Query: 912 EDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDY 971
E E + ++ + +E+ R + +E ++ AQ++LD + + + K E +
Sbjct: 918 E----EYKKSNAKQRESIEKADRDIDQLEPEIAKAQAKLDDISRRAEAKERELQQALTRL 973
Query: 972 TKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ ++ ++ EI +Y RG QL R+ ++ + Q + + ++ R IN+I+
Sbjct: 974 SDRVNQLNLANDEIKSYIDRGGPEQLNKSRKELENIQQEIKKLEEQQSETTREINKISAQ 1033
Query: 1032 IAN------QSLEEIDLKNNLTLLEK-KEAVAKLNEELKLSEIMISDLTKYHHTLE---- 1080
+ + Q + I + + LLE+ + + +L E+ +EI D +++ E
Sbjct: 1034 LKDSDNTRRQYSDNISYRQSCRLLEEVQREIQQLEEQ--NAEI---DRSRFKEESERWTR 1088
Query: 1081 --NCVIKYHSQKMRSI----NRLIR--EYWTRIY------------QLKLSEIMISDLTK 1120
N + + KM + ++L++ W Y +++ ++ + DL +
Sbjct: 1089 KHNALAAQQASKMGEMKSKDDQLLQLLADWNTDYKDAAANYKEAHIKVETTKAAVDDLGR 1148
Query: 1121 YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRV 1180
Y L+ ++KYHS KM INR++ E W R Y+G D+D I I +D ++ R+YNYRV
Sbjct: 1149 YGGALDKAIMKYHSLKMEEINRIVEELWQRTYRGTDVDTILIRSD-NENAKGNRSYNYRV 1207
Query: 1181 VQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------------------- 1213
K G E DMR RCSAGQRVLA +IIRL +++
Sbjct: 1208 CMVKQGAEMDMRGRCSAGQRVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLA 1267
Query: 1214 ------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1268 ESLHDIIKTRQQQANFQLIVITHDEEFLHHMQCADFSDYYYRVSRNER 1315
>gi|317138239|ref|XP_001816777.2| DNA repair protein Rad50 [Aspergillus oryzae RIB40]
Length = 1448
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 325/1357 (23%), Positives = 608/1357 (44%), Gaps = 179/1357 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 131 MSKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-- 188
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKL + + RSL
Sbjct: 189 -------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVSTRSLQ 229
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
LS K T + + + G + + E M +GVSKAIL++VIFCHQ
Sbjct: 230 LSVKKTTRQQKTLEGQLL--MIKDGERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQ 287
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++
Sbjct: 288 DESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEK 347
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTER 300
AD ++ Q+ + EE + M+ + E + + + S + + K+ E
Sbjct: 348 ADRAEKRSIKLQQEIETLREETQQLSLEMRRVAELADKAWRESESYSQVLGTLEGKRIEA 407
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ- 359
IQ + + L+ + +L D+ LQS L F + K + E QE + + E K+
Sbjct: 408 KSIQSTIDNLKRHLVELDDSDEW-LQSNLEQF----ESKQLQYEQQEEARKENYMEIKEQ 462
Query: 360 ---SHTHINEAQMKLGKLERDE-------ETHKKLNDTLKTK-----LNNLADTLCLDTT 404
+ + Q + GK E D+ E +++ + +N+ D +D
Sbjct: 463 IERTRQKLGVKQAEYGKFENDKANFERQVERRRRMTKEIARSNNIRGFDNIQDQNDVDEF 522
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
+ + L+K T+D+ ++R Q +N + +K L+
Sbjct: 523 MR------KVRKLLKDQNQTLDR-------VKREAQGELREVQTALNDIAQQKSALQETK 569
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL---SKSLDPDQL 521
+ K+QI N K+ T ++NE+N + L+ + + S +DQ +KS D+
Sbjct: 570 NAAKRQIAANDKESTTYQGKLNEINVDEGVQAALEANIEDIQSHLDQAKGRAKSASWDKE 629
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHD 581
++I + IR LEDE +++E+ + LA + LK + + + +K H
Sbjct: 630 IHDINSEIRG---LEDESSRLNSELIDATKRAGDLARLDHLKKELKERERSLETMKGAHG 686
Query: 582 RAFHLLF--DMIP---EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSS 636
D P E+ F++ L++ + ++R + + + + L +E + N+
Sbjct: 687 ERLSKFVGQDWKPDTLEQEFQHVLEEE----SKQVSRAENERDGVSRELEQVEFRLKNTK 742
Query: 637 KTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIG 695
K L +++ L E ++ + + +P +E V L+ ++ Q +++ + QY Y+
Sbjct: 743 KVLGQRQKALKECIEEIREAINDEP--EEFPEV-LKQRQAQLDIARKDAEQYAGIGEYMA 799
Query: 696 KLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
E + C LC R F+SD + NKL+ +K+ +++ + L + +
Sbjct: 800 TCLETVKQSKVCRLCHRGFKSDAELQTFRNKLENLVKKAKRDADDE--DVKNLEEDLEAA 857
Query: 753 QELKPVYENIMKLQDTDIPSL----------RSKLI---ELEENVIETKGELKKLKTALE 799
+ Y+ + Q T+IP L R +L+ E + ++ K E K+ AL
Sbjct: 858 RSASTSYDTWSRFQQTEIPELEKEEEQYVLQRDELLNQLEDRDKIVSEKTEKKRDVEAL- 916
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEK 859
KT T + G++ + I++L++ Q++ + T D+ + +A EK
Sbjct: 917 -AKTV-NTIVRYDGEIKSIRSQIQDLSSKQQD--------TTSARTLEDIQEEIAAIGEK 966
Query: 860 KNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCE 917
L SK+ E QT+ +N +LQ L+ K+++ + + ++ + +L +E E
Sbjct: 967 SRALKKSLSKLTHEKEQTQTEINNLELQ-LRDVKSNLDNAKFQLERKSDLLARIE----E 1021
Query: 918 LEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEE 977
+ +++ + + + R + + +L Q++ D + + + + E I ++ + +
Sbjct: 1022 YKNLNNQQREAIAKADRDIEDLTPELLKVQAKYDDISQRAEAREREMQQTISQMSESVHQ 1081
Query: 978 VKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSL 1037
++ EI Y +RG TQL + ++ + ++ + A++ + IN+I+ + +
Sbjct: 1082 LELANEEIDAYNERGGPTQLERSKRELENIEKQIGQLEAEQANITKEINKISSQLKDSEN 1141
Query: 1038 EEIDLKNNLTLLEKKEAVAKLNEELK--LSEIMISDLTKYHHTLENCVIKYHSQKMRSIN 1095
+ +NLT + A+ ++ +E++ ++ D +++ E ++++ +
Sbjct: 1142 TKRQYADNLTYRQATRALDEVTQEIEQLAAQNAEVDRSRFKDESERRTREHNALAAKQAG 1201
Query: 1096 RL------------IREYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIK 1131
R+ + W Y+ ++ ++ + DL +Y L+ ++K
Sbjct: 1202 RMGEMKSKDDQLMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMK 1261
Query: 1132 YHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDM 1191
YH KM IN ++ E W + Y+G D+D I I +D ++ R+YNYRV K G E DM
Sbjct: 1262 YHGLKMEEINAIVGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDM 1320
Query: 1192 RNRCSAGQRVLACLIIRLFISD-------------------------------------- 1213
R RCSAGQ+VLA +IIRL +++
Sbjct: 1321 RGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQ 1380
Query: 1214 -QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ + D + Y R+ R+ K
Sbjct: 1381 AQSNFQLIVITHDEEFLRYMQCGDFSDYYYRVSRNEK 1417
>gi|401623992|gb|EJS42069.1| rad50p [Saccharomyces arboricola H-6]
Length = 1312
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 346/1362 (25%), Positives = 622/1362 (45%), Gaps = 208/1362 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P +
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
G F+HDP+I + + A VKL T N + V R++
Sbjct: 61 GGV---------------------FIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDTQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ +E+ +IE + I E+ +L + ++ + ++ +
Sbjct: 214 LDKDRSKGMKLNIHQIQIKIDQYNQEVSHIESQLNEITEQSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE----RLKS 351
K + I + L +SI + K +L + L F L K ++L++ E LK
Sbjct: 274 LKNSKASISDQVKRLSNSI-DILDLSKPDLLNLLANFSKVLMNKNNQLKDLETDIFNLKD 332
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTT 404
Q + +S++ I + G+LE +ET++K L +T + + ++ C D
Sbjct: 333 QQSSLQIRSNSLIR----RQGELEAGKETYEKNLNHLSSLKETFQQMFQHNSNDQCDDM- 387
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
+Q E + ++SQ D+ + F+ K+ ++ L+ + I
Sbjct: 388 --AQINHEMSQFKTRISQ--------DLSSIAEQFAKEIQMKETNLSELV-------NSI 430
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS---KSLDPDQL 521
Q +E NKKD +I I E+ + + + T+ + +N E++ L + L +
Sbjct: 431 TVNSQNLEYNKKDRIKLIRDIEELTEKLRSFKNPSTQ-DGLNQELENLKTYKERLQSWED 489
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
+N I ++ + +E+ +++ +I Q Q A++ +K +K D+
Sbjct: 490 ENTIPKLAQKIEDKNNEMILLENQIEKFQDRIMKTNQQADLYAKLGLIKKSISAKSDDLK 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDI--NAKEKH------ 624
++ E+ +D +F ++ +F+ S D + IN +Q++I N KE H
Sbjct: 550 IIVEKLQNDPKIRKIFTIM--HDFQRS-DLEMDFQKLFIN-MQKNIAINNKEMHEFDRKY 605
Query: 625 ------LYTLEANVSNSSKTLRDQKRTLAELMDR-MELVLGSKPFEDELDRVTLELKREQ 677
L T+E ++ NS ++ KR + L++ + + D L+ L K
Sbjct: 606 SNALYNLNTIEKDLQNSEES----KRKVTHLLNENLPEDCTIDEYGDVLEETELSYKTAL 661
Query: 678 EEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKI-----KEIP 732
E + M +T FN ++ E + C LC+R FE++ L+ +LKTK K +
Sbjct: 662 ENLKMHQTT-LEFNRKALEIAERDNCCYLCSRKFENESFKSKLLQELKTKTDADFEKTLK 720
Query: 733 EQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELK 792
+ NN+K ++D L ++ + L + E I +++ L + E +K +L
Sbjct: 721 DTVNNEKEYLDSLRMLEKHIISLNSINEKINDAKES--------LEKAREEAKFSKSKLD 772
Query: 793 KLKTALETPKTKEKTALS----LQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVD 848
L+ T K +++ A S L T +++ I++L + + + S +
Sbjct: 773 ALEVMSTTLKNEKEFAESEIRPLIEKFTYMEREIKDLENNSKTISDELSIYNTSEDAVQT 832
Query: 849 LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGML 908
+D++ QQ++ + L R I Q + +EK++ + N I K+LTV L
Sbjct: 833 VDELRDQQRKMNDSLREIRKCISDLQMK---KDEKVRENSRMINLIKEKELTVSEIESAL 889
Query: 909 -------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKL 961
+S+ +K ++ +DS +E L ++ ++ + N AQ+ L+ K E ++
Sbjct: 890 TQKQNIDESIRSKKLNIKDIDS----RVEALESQIISLQRKKNEAQNVLNETKSERDLQI 945
Query: 962 NEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRE----SVQKLNQRKEDIIAK 1017
+ + + D + ++ + I +++++ +G A +RE +Q ++Q KE + K
Sbjct: 946 SNKQKVVADVNRLIDRFQNIYNDVVDFESKGFSELQATIRELESNKIQ-MHQLKEKLDLK 1004
Query: 1018 RGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHH 1077
+NE + +A+ + EE +LK NL L++ K + + E+ ++ ++ + +
Sbjct: 1005 SN----EMNEEKRKLADSNNEEKNLKQNLELIDLKSQLQDIESEINELDVQNAEAERDKY 1060
Query: 1078 TLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKLS 1111
E+ ++ + +K+ S N + + Y +L+
Sbjct: 1061 QEESLRLRTNFEKLSSENAGKLGEMKQLQNQVDSLTHQLCTDYKDIEKNYHKEWVELQTR 1120
Query: 1112 EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE 1171
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1121 SFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTV 1180
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------ 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1181 KGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTNL 1240
Query: 1214 ---------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1241 DEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>gi|238504128|ref|XP_002383296.1| DNA repair protein Rad50 [Aspergillus flavus NRRL3357]
gi|83764631|dbj|BAE54775.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690767|gb|EED47116.1| DNA repair protein Rad50 [Aspergillus flavus NRRL3357]
Length = 1326
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 323/1354 (23%), Positives = 603/1354 (44%), Gaps = 173/1354 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
+A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 9 LAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-- 66
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKL + + RSL
Sbjct: 67 -------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVSTRSLQ 107
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
LS K T + + + G + + E M +GVSKAIL++VIFCHQ
Sbjct: 108 LSVKKTTRQQKTLEGQLL--MIKDGERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQ 165
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++
Sbjct: 166 DESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEK 225
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTER 300
AD ++ Q+ + EE + M+ + E + + + S + + K+ E
Sbjct: 226 ADRAEKRSIKLQQEIETLREETQQLSLEMRRVAELADKAWRESESYSQVLGTLEGKRIEA 285
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ- 359
IQ + + L+ + +L D+ LQS L F + K + E QE + + E K+
Sbjct: 286 KSIQSTIDNLKRHLVELDDSDEW-LQSNLEQF----ESKQLQYEQQEEARKENYMEIKEQ 340
Query: 360 ---SHTHINEAQMKLGKLERDE-------ETHKKLNDTLKTK-----LNNLADTLCLDTT 404
+ + Q + GK E D+ E +++ + +N+ D +D
Sbjct: 341 IERTRQKLGVKQAEYGKFENDKANFERQVERRRRMTKEIARSNNIRGFDNIQDQNDVDEF 400
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
+ + L+K T+D+ ++R Q +N + +K L+
Sbjct: 401 MR------KVRKLLKDQNQTLDR-------VKREAQGELREVQTALNDIAQQKSALQETK 447
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL---SKSLDPDQL 521
+ K+QI N K+ T ++NE+N + L+ + + S +DQ +KS D+
Sbjct: 448 NAAKRQIAANDKESTTYQGKLNEINVDEGVQAALEANIEDIQSHLDQAKGRAKSASWDKE 507
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHD 581
++I + IR LEDE +++E+ + LA + LK + + + +K H
Sbjct: 508 IHDINSEIRG---LEDESSRLNSELIDATKRAGDLARLDHLKKELKERERSLETMKGAHG 564
Query: 582 RAFHLLF--DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
D P+ + L + ++R + + + + L +E + N+ K L
Sbjct: 565 ERLSKFVGQDWKPD-TLEQEFQHVLEEESKQVSRAENERDGVSRELEQVEFRLKNTKKVL 623
Query: 640 RDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLE 698
+++ L E ++ + + +P +E V L+ ++ Q +++ + QY Y+
Sbjct: 624 GQRQKALKECIEEIREAINDEP--EEFPEV-LKQRQAQLDIARKDAEQYAGIGEYMATCL 680
Query: 699 ENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQEL 755
E + C LC R F+SD + NKL+ +K+ +++ + L + + +
Sbjct: 681 ETVKQSKVCRLCHRGFKSDAELQTFRNKLENLVKKAKRDADDE--DVKNLEEDLEAARSA 738
Query: 756 KPVYENIMKLQDTDIPSL----------RSKLI---ELEENVIETKGELKKLKTALETPK 802
Y+ + Q T+IP L R +L+ E + ++ K E K+ AL K
Sbjct: 739 STSYDTWSRFQQTEIPELEKEEEQYVLQRDELLNQLEDRDKIVSEKTEKKRDVEAL--AK 796
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNE 862
T T + G++ + I++L++ Q++ + T D+ + +A EK
Sbjct: 797 TV-NTIVRYDGEIKSIRSQIQDLSSKQQD--------TTSARTLEDIQEEIAAIGEKSRA 847
Query: 863 LNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG 920
L SK+ E QT+ +N +LQ L+ K+++ + + ++ + +L +E E +
Sbjct: 848 LKKSLSKLTHEKEQTQTEINNLELQ-LRDVKSNLDNAKFQLERKSDLLARIE----EYKN 902
Query: 921 MDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKR 980
+++ + + + R + + +L Q++ D + + + + E I ++ + +++
Sbjct: 903 LNNQQREAIAKADRDIEDLTPELLKVQAKYDDISQRAEAREREMQQTISQMSESVHQLEL 962
Query: 981 IKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEI 1040
EI Y +RG TQL + ++ + ++ + A++ + IN+I+ + + +
Sbjct: 963 ANEEIDAYNERGGPTQLERSKRELENIEKQIGQLEAEQANITKEINKISSQLKDSENTKR 1022
Query: 1041 DLKNNLTLLEKKEAVAKLNEELK--LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL- 1097
+NLT + A+ ++ +E++ ++ D +++ E ++++ + R+
Sbjct: 1023 QYADNLTYRQATRALDEVTQEIEQLAAQNAEVDRSRFKDESERRTREHNALAAKQAGRMG 1082
Query: 1098 -----------IREYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHS 1134
+ W Y+ ++ ++ + DL +Y L+ ++KYH
Sbjct: 1083 EMKSKDDQLMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHG 1142
Query: 1135 QKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
KM IN ++ E W + Y+G D+D I I +D ++ R+YNYRV K G E DMR R
Sbjct: 1143 LKMEEINAIVGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGR 1201
Query: 1195 CSAGQRVLACLIIRLFISD---------------------------------------QK 1215
CSAGQ+VLA +IIRL +++ Q
Sbjct: 1202 CSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQAQS 1261
Query: 1216 NFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
NFQLIVITHDEEF+ + D + Y R+ R+ K
Sbjct: 1262 NFQLIVITHDEEFLRYMQCGDFSDYYYRVSRNEK 1295
>gi|315056489|ref|XP_003177619.1| DNA repair protein Rad50 [Arthroderma gypseum CBS 118893]
gi|311339465|gb|EFQ98667.1| DNA repair protein Rad50 [Arthroderma gypseum CBS 118893]
Length = 1274
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 334/1363 (24%), Positives = 614/1363 (45%), Gaps = 225/1363 (16%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 7 AKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--- 63
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLL 121
S G F+HDP++ + E A VKL + + V RSL L
Sbjct: 64 ------------------SKGGAFIHDPKLCGEKEVFAQVKLAFKATSAAKMVVTRSLQL 105
Query: 122 SNKNGKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+ K + T+ ++ T + + L Q M +GVSKA+L++V
Sbjct: 106 TVKK----LTRQQKTLEGQLLMIKEGERTAISSRVAELDQI----MPQYLGVSKAVLDSV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK LRK+ E A Y+
Sbjct: 158 IFCHQDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKA----LRKKQNEELAKYKIME 213
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEEL----HNIEESMKPINEKLVQLTEKERNMSVMST 291
N+ ++ K + K + E L H + + M+ + E + ++ + + +
Sbjct: 214 NHARDDKDKADRAEKRSLKLQEEIEALRAESHELSKEMRRVAELADKAWKESESYAEILG 273
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE-RLK 350
+ K+ E IQ S N L + ++ D+ LQS L F + + +E +QE LK
Sbjct: 274 ALEGKRIEAKSIQTSINNLRQHLVEVEESDEW-LQSTLEQF----ESRQAEYRSQEDTLK 328
Query: 351 SQYIQEEK---QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKS 407
+Y+ ++ Q+ + Q + GK E D+ + + ++ ++ L D ++
Sbjct: 329 EKYMDLKELIEQNRHKLGLKQTECGKNENDK---AQFDRQVERRVR-----LIKDIARQN 380
Query: 408 QYTPEEGEGLIKMSQTTIDKYLSDIKIL--ERTFSDNENTKQAE---------INALIVE 456
+ +G+ + + I+ ++ I+ L ER+ + + ++A+ +N L
Sbjct: 381 NFRGYDGD----LDEMEINDFMDRIQKLTKERSQALEKAKQEAQSQLKDAQSLLNQLSQR 436
Query: 457 KVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSL 516
K L+ + K+QI N K+ + INE++ + +++++ +++ +
Sbjct: 437 KSALQEAKNAAKKQISVNDKESDTIQRSINEMDVDEGKRAAIESRMEETEKILEKEKEKA 496
Query: 517 DPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL 576
+ +I+ + LED+ ++AE+ + LA + LK L
Sbjct: 497 KNASWETDIQQNDSELRSLEDKSSKLNAELIQGTKKAGDLARLDHLKKE----------L 546
Query: 577 KERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSS 636
K+R D + E ++ K L I F + NA+ K L+ A+V N++
Sbjct: 547 KDRDDVLKEASTLVTTAERERDGTGKELELIDFKLK------NAR-KSLHQHGADVENAA 599
Query: 637 KTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMM--TSTQYL-FNSY 693
K + D V+G +P E +K++Q E+ M + QY Y
Sbjct: 600 KKIND--------------VIGDEPEE-----YPHTVKQKQTELDMARKDADQYAGLGKY 640
Query: 694 IGKLEE---NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR 750
+ + ++ C C R F+++ + NKLK IK+ ++ + I+ +
Sbjct: 641 LNMCLDAVNDKKVCRTCARPFKTESELQIFKNKLKALIKKATDE--DAVAEIEAREAELE 698
Query: 751 SLQELKPVYENIMKLQDTDIPSLRSKL--IELEENVIETKGEL--KKLKTALETPKTKEK 806
+++E+ YE +L +TDIP+L+ + +E E V+ TK E K + +E+ + E
Sbjct: 699 NVREVGTFYETWNRLTNTDIPALKKEQSDLETEREVVLTKLEDHDKIVAQRVESKRDIE- 757
Query: 807 TALSLQGDLTLLDQNIRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELN 864
SL ++ + + E++TLQ +++ +K +G T D+ +A EK +L
Sbjct: 758 ---SLSKNIATIVRYNNEISTLQTQIQELSAKQEETGTSRTLEDIQDEIATLGEKSRQLK 814
Query: 865 TFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMD 922
SK+ E Q+R++ +L+ L+ + D+ + ++ A ++ +ED + +
Sbjct: 815 RASSKLTHELNQSRVDVGKLELK-LRDLRRDLDNVNFQLEKKATLVSRVEDYRNQ----- 868
Query: 923 SVYQTE-LEELGRKVAPIETQLNLAQSELDALK---KEHKKKLNEEGAKIQDYTKQLEEV 978
++ Q E +E+ + + +++ AQ+ D + ++ +++L +E + + D QL+
Sbjct: 869 NLKQREAIEKADNDIESLVPEVSKAQARHDDISTRGEQRERELQQEVSGLNDSLHQLDLA 928
Query: 979 KRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLE 1038
+I NY +RG QL + +Q ++ + + A++ R +N I+ + +
Sbjct: 929 SE---DITNYIERGGPAQLERSKRELQNISDEIKRLEAEQTDLTRELNSISTRLKDSEST 985
Query: 1039 EIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK-MRSINRL 1097
+ +NL ++ +A+ +N+E I+DL + ++ K S++ R N L
Sbjct: 986 KRQYSDNLRYRQESKALISVNQE-------IADLESQNAEVDRSRFKEESERNTREHNAL 1038
Query: 1098 IREYWTRIYQLK--------------------------------LSEIMISDLTKYHHTL 1125
+ +++ ++K ++ + DL +Y L
Sbjct: 1039 AAKQASKMGEMKSKDDQLMQLLADWNTDYKDAGAKFKEAHIKVETTKAAVDDLGRYGGAL 1098
Query: 1126 ENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKN 1185
+ ++KYH KM INR+I E W + Y+G D+D I I +D + R+YNYRV K
Sbjct: 1099 DKAIMKYHGLKMEEINRIIGELWQKTYRGTDVDTILIRSD-NESARGNRSYNYRVCMVKQ 1157
Query: 1186 GIEQDMRNRCSAGQRVLACLIIRLFISD-------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1158 DAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHE 1217
Query: 1214 -------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D Y R+ R+ +
Sbjct: 1218 IIRTRQQQANFQLIVITHDEEFLRSMQCGDFCDYYYRVSRNER 1260
>gi|391870133|gb|EIT79321.1| DNA repair protein RAD50, ABC-type ATPase/SMC superfamily
[Aspergillus oryzae 3.042]
Length = 1309
Score = 271 bits (694), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 323/1354 (23%), Positives = 603/1354 (44%), Gaps = 173/1354 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
+A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 9 LAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-- 66
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKL + + RSL
Sbjct: 67 -------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVSTRSLQ 107
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
LS K T + + + G + + E M +GVSKAIL++VIFCHQ
Sbjct: 108 LSVKKTTRQQKTLEGQLL--MIKDGERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQ 165
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++
Sbjct: 166 DESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEK 225
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTER 300
AD ++ Q+ + EE + M+ + E + + + S + + K+ E
Sbjct: 226 ADRAEKRSIKLQQEIETLREETQQLSLEMRRVAELADKAWRESESYSQVLGTLEGKRIEA 285
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ- 359
IQ + + L+ + +L D+ LQS L F + K + E QE + + E K+
Sbjct: 286 KSIQSTIDNLKRHLVELDDSDEW-LQSNLEQF----ESKQLQYEQQEEARKENYMEIKEQ 340
Query: 360 ---SHTHINEAQMKLGKLERDE-------ETHKKLNDTLKTK-----LNNLADTLCLDTT 404
+ + Q + GK E D+ E +++ + +N+ D +D
Sbjct: 341 IERTRQKLGVKQAEYGKFENDKANFERQVERRRRMTKEIARSNNIRGFDNIQDQNDVDEF 400
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
+ + L+K T+D+ ++R Q +N + +K L+
Sbjct: 401 MR------KVRKLLKDQNQTLDR-------VKREAQGELREVQTALNDIAQQKSALQETK 447
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL---SKSLDPDQL 521
+ K+QI N K+ T ++NE+N + L+ + + S +DQ +KS D+
Sbjct: 448 NAAKRQIAANDKESTTYQGKLNEINVDEGVQAALEANIEDIQSHLDQAKGRAKSASWDKE 507
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHD 581
++I + IR LEDE +++E+ + LA + LK + + + +K H
Sbjct: 508 IHDINSEIRG---LEDESSRLNSELIDATKRAGDLARLDHLKKELKERERSLETMKGAHG 564
Query: 582 RAFHLLF--DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
D P+ + L + ++R + + + + L +E + N+ K L
Sbjct: 565 ERLSKFVGQDWKPD-TLEQEFQHVLEEESKQVSRAENERDGVSRELEQVEFRLKNTKKVL 623
Query: 640 RDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLE 698
+++ L E ++ + + +P +E V L+ ++ Q +++ + QY Y+
Sbjct: 624 GQRQKALKECIEEIREAINDEP--EEFPEV-LKQRQAQLDIARKDAEQYAGIGEYMATCL 680
Query: 699 ENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQEL 755
E + C LC R F+SD + NKL+ +K+ +++ + L + + +
Sbjct: 681 ETVKQSKVCRLCHRGFKSDAELQTFRNKLENLVKKAKRDADDE--DVKNLEEDLEAARSA 738
Query: 756 KPVYENIMKLQDTDIPSL----------RSKLI---ELEENVIETKGELKKLKTALETPK 802
Y+ + Q T+IP L R +L+ E + ++ K E K+ AL K
Sbjct: 739 STSYDTWSRFQQTEIPELEKEEEQYVLQRDELLNQLEDRDKIVSEKTEKKRDVEAL--AK 796
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNE 862
T T + G++ + I++L++ Q++ + T D+ + +A EK
Sbjct: 797 TV-NTIVRYDGEIKSIRSQIQDLSSKQQD--------TTSARTLEDIQEEIAAIGEKSRA 847
Query: 863 LNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG 920
L SK+ E QT+ +N +LQ L+ K+++ + + ++ + +L +E E +
Sbjct: 848 LKKSLSKLTHEKEQTQTEINNLELQ-LRDVKSNLDNAKFQLERKSDLLARIE----EYKN 902
Query: 921 MDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKR 980
+++ + + + R + + +L Q++ D + + + + E I ++ + +++
Sbjct: 903 LNNQQREAIAKADRDIEDLTPELLKVQAKYDDISQRAEAREREMQQTISQMSESVHQLEL 962
Query: 981 IKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEI 1040
EI Y +RG TQL + ++ + ++ + A++ + IN+I+ + + +
Sbjct: 963 ANEEIDAYNERGGPTQLERSKRELENIEKQIGQLEAEQANITKEINKISSQLKDSENTKR 1022
Query: 1041 DLKNNLTLLEKKEAVAKLNEELK--LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL- 1097
+NLT + A+ ++ +E++ ++ D +++ E ++++ + R+
Sbjct: 1023 QYADNLTYRQATRALDEVTQEIEQLAAQNAEVDRSRFKDESERRTREHNALAAKQAGRMG 1082
Query: 1098 -----------IREYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHS 1134
+ W Y+ ++ ++ + DL +Y L+ ++KYH
Sbjct: 1083 EMKSKDDQLMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHG 1142
Query: 1135 QKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
KM IN ++ E W + Y+G D+D I I +D ++ R+YNYRV K G E DMR R
Sbjct: 1143 LKMEEINAIVGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGR 1201
Query: 1195 CSAGQRVLACLIIRLFISD---------------------------------------QK 1215
CSAGQ+VLA +IIRL +++ Q
Sbjct: 1202 CSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQAQS 1261
Query: 1216 NFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
NFQLIVITHDEEF+ + D + Y R+ R+ K
Sbjct: 1262 NFQLIVITHDEEFLRYMQCGDFSDYYYRVSRNEK 1295
>gi|190344796|gb|EDK36551.2| hypothetical protein PGUG_00649 [Meyerozyma guilliermondii ATCC 6260]
Length = 1302
Score = 271 bits (694), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 348/1381 (25%), Positives = 631/1381 (45%), Gaps = 232/1381 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L I G+R+F ++ + + F PLTLI G+NGCGKTTIIEC+K+A T + P
Sbjct: 1 MSNLYKLSIQGVRSFDSESSETIEFGFPLTLICGQNGCGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FV+DP I ++ +A VKL N ++ R++
Sbjct: 59 -------------------SKGGTFVNDPSIAARNTVNAQVKLAFQNVNGKSMICTRTMQ 99
Query: 121 LSNKNGKDNCATRDTTISRK--IFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K GK + T+ + I G + + E ++ +G S+AIL+ VIFC
Sbjct: 100 LTKKRGKGVASNTFKTLEGQLSIMDQGQKSTISTKNAELDSQIPVYLGASRAILDYVIFC 159
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQ++S WPL E +K+ FD+IF+A+K+ K L+S+K + + +I I + Q K
Sbjct: 160 HQDDSLWPLSEASVLKKRFDDIFEASKFTKVLDSLKTIKKDMSNDIKLIDQNVQHLRVDK 219
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT--- 295
AD + + + + D EE+ N+ +++ EKER + Q+
Sbjct: 220 SRADKIRSKVQSTSVTCDALSEEIANLTSTIE----------EKEREAEALFVSNQSFQE 269
Query: 296 ---KKTERDMIQESCN-ELESSIK--QLFSGDKAELQSKLNLFKINLDEKCSELENQERL 349
+ + Q+SC +LE +K ++ + L S+L+ F+ +L E+ +E
Sbjct: 270 ILSRHEQLQYSQKSCQVQLERIVKNIEILPDSETVLMSRLDNFESHLQERQAE------- 322
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
S E + S + + +L L R E + K + T L + ++ AK
Sbjct: 323 ASMKHNELRASEERLQNLRSELNSLSRTEGSLKSKEELYHTNKQKLVQLIEENSLAKD-- 380
Query: 410 TPEEGEGLIKMSQTTIDKYLSDI-KILERTFSDNENTKQAEINALIVEKV-----ELESK 463
P K + K + D+ +++ S E K + N L E+ E+
Sbjct: 381 -P-------KPNDMNFQKIVDDLDNTIKKASSAYERLKSS--NKLSYEQAASRVHEISET 430
Query: 464 IKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQ--- 520
I +Q+ + ++DL+N +QINE + +T Q + +L E+ L DP
Sbjct: 431 ITKSEQRYQYYQQDLSNTRSQINEGRKRLNTQQQQEAELEIHKRELKDLEDKYDPQSHND 490
Query: 521 ----LKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLK---NRKESKLADI 573
L + IE Q +LE + + +++ Q+ TL+++ +K RKE LA
Sbjct: 491 AIKSLDSLIENERSQLAQLESQSDTLGRKVAQASKQSDTLSKVSFIKEGITRKEVTLA-- 548
Query: 574 NLLKERHDRAFHLLFDMIPEENFKNS-LDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
H ++ LF+ + + ++N+ D+ + +T +R+ D+ + E+ ++ + V
Sbjct: 549 -----AHLKSLGSLFEKMIGKQYENTGSDELEAELTKAGSRL--DLKSSEQKNFSRQ--V 599
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGS--KPFEDE----LDRVTLELKREQEEVSMMTST 686
+ + L + + E +D+ + K E+E ++V +L+ + +T
Sbjct: 600 ESLTVKLESTQAQITENLDKTASIKNDIVKVIEEEEIDFYEQVISDLEENHRDALESLNT 659
Query: 687 QYLFNSYIGK---LEENEPRCPLCTRFFESDYSVPGL---VNKLKTKIKEIPEQTNNKKT 740
+ N + K + E+E C LC R F+S PGL + +L+ +K + +T K+
Sbjct: 660 FEVTNQFKIKAIEIAESEKYCTLCLRHFDS----PGLSKFLTELRANVKSMTAETLEKEA 715
Query: 741 HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALET 800
+ + L++ K + I+K + R +L ELE +TK E +++K A E
Sbjct: 716 K-----ETAKELEQAKNINPLILKYR-----QCRQELPELEAK--KTK-ETQQMKDA-EK 761
Query: 801 PKTKEKTAL-SLQGD---LTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQ 856
K K + L SLQGD L L + E++ +++E+E + ++S + + D V Q
Sbjct: 762 LKAKIDSELESLQGDVDSLKALRTPLAEVSRIRKEIEVSQRELSSLEDSLTDYGSVTEQS 821
Query: 857 K-EKKNELNTFRSKIESGQTRLNSHNE----KLQSLQKQKNDIHSKQLTVQGGAGMLKSL 911
E + E++ ++++ + ++ + E K + L + + + K+L + L
Sbjct: 822 PIELQREMDRINREMKALRQSVSDNVESKYVKQRELARLEGRVKDKKLAISVLERALIDQ 881
Query: 912 EDRKCELEGMDSVYQTELEELGRKVAPIETQL------------NLAQSELDALKKEHKK 959
E K ++G Y+ ++ L + + IE +L NL + ++ K E +K
Sbjct: 882 EHEKVAIDG----YEAQVVVLQQSMTEIEQELGIQREKRKEEEENLKRITVEIEKVEQEK 937
Query: 960 --------KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRK 1011
KL ++ + + K+ ++V R+K E ++ ++ + +++KL
Sbjct: 938 EAEINRNHKLKDQVSDLLQNIKEFDDVDRVKFETVS-------NDISTINSNIEKLEVEI 990
Query: 1012 EDIIAKRGVCERTINEINQSIANQSLEEID----------LKNNLTLLEKKEAVAKLNE- 1060
I + E++INE N ++ +Q + +D ++N + +L+ ++A +K NE
Sbjct: 991 SKIQKDMKMVEKSINEAN-NLKSQIRDNLDYRRLQNEMNEIENQIGMLDIEDAQSKRNEY 1049
Query: 1061 -----ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI---YQ----- 1107
E++L I++L H V + Q +R++ + + + YQ
Sbjct: 1050 NERTREIRLE---ITNLNSEHAGKVGEVKQLRDQ-IRTMKEDLNSEYVDVDQRYQAEWVK 1105
Query: 1108 LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG 1167
L+ + + SDL Y L+N ++KYH+ KM SINR++ E W + Y+G D+D I+I +D+
Sbjct: 1106 LQTNMLATSDLQTYSKALDNAIMKYHTHKMESINRILNELWKQTYKGTDVDTIAIKSDIN 1165
Query: 1168 TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------------- 1213
++ R+YNYRVV K E DMR RCSAGQ+VL ++IRL +++
Sbjct: 1166 LQAKGNRSYNYRVVMYKQDCELDMRGRCSAGQKVLTSILIRLALAECFGSNCGIIALDEP 1225
Query: 1214 -------------------------QKNFQLIVITHDEEFIENLTA---IDRAYVVRIVR 1245
QKNFQLIVITHDE+F+ ++ D Y R+ R
Sbjct: 1226 TTNLDVENTESLAQSLNNIIEFRRGQKNFQLIVITHDEKFLSHIGGEQFTDNFY--RVQR 1283
Query: 1246 D 1246
D
Sbjct: 1284 D 1284
>gi|242769947|ref|XP_002341877.1| DNA repair protein Rad50 [Talaromyces stipitatus ATCC 10500]
gi|218725073|gb|EED24490.1| DNA repair protein Rad50 [Talaromyces stipitatus ATCC 10500]
Length = 1328
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 316/1350 (23%), Positives = 607/1350 (44%), Gaps = 172/1350 (12%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 32 IDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN----- 86
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
S G F+HDP++ + E A VKL + + RSL L+
Sbjct: 87 ----------------SKGGAFIHDPKLCGEKEVLAQVKLAFKATSGAKMVATRSLQLTV 130
Query: 124 KNGKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
K + T+ ++ T + + L Q M +GVSKAIL++VIF
Sbjct: 131 KK----TTRQQKTLEGQLLMVKDGERTAISSRVAELDQI----MPQYLGVSKAILDSVIF 182
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q +
Sbjct: 183 CHQDESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKFKIMEQHSKED 242
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
K +AD ++ ++ + EE H I + M+ E + ++ + + + + K+
Sbjct: 243 KDKADRAEKRSIKLQEEIEALREETHQISQEMRNAAELADKAWKESESYAQVIGALEGKR 302
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQ---YI 354
E IQ + + L+ + ++ D+ LQS L F + +LE Q++ +Q Y+
Sbjct: 303 IEARSIQLTIDNLKRHLVEVDESDEW-LQSSLEQF------ESRQLEYQQQEDAQKERYM 355
Query: 355 QEEKQ---SHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
++Q + + Q + GK E D++ ++ ++ + N + ++
Sbjct: 356 DIKEQIESTREQLGLKQAETGKYENDKDQFER---QIRRRENMI-----------KEFAR 401
Query: 412 EEG-EGL-IKMSQTTIDKYLSDI--------KILERTFSDNEN---TKQAEINALIVEKV 458
E G + ++ ID+++ + + LER + ++ Q +N + K
Sbjct: 402 ENNIRGFDDALDESKIDEFMHRMQKMVKEHSQALERARKEGQSELRETQNVLNQIAQRKS 461
Query: 459 ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
+ ++QI N ++ +V +++NE++ + T+ VL++K S +++L +
Sbjct: 462 AFQETKNVARRQIADNDREAASVQSRLNEIDVDEGTVAVLESKKEEAQSRLEKLKDAARV 521
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE 578
+++ Q LEDE ++ E+ + LA + LK + + + +
Sbjct: 522 ATWDKDLQDANTQLRSLEDESTKLNQELIAGTKKAGDLARLAHLKKELKDRERQLETMSG 581
Query: 579 RH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
H +R L+ + +N + L+ + ++ + + + + L +E + +
Sbjct: 582 AHGNRLSQLVSEQWNPDNLEREYQNVLTDASNNMTLAERNRDGVGRELDQVEYKLKDCRT 641
Query: 638 TLRDQKRTLAELMDRMELVLGSKP--FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIG 695
L +K+ E + ++ + P + D L L + +++V T FN +
Sbjct: 642 ALEKRKKERDECVKKIRDAIDDDPTEYSDVLQTRQNHLDQTRKDVEQFTGMHEYFNMCLE 701
Query: 696 KLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQEL 755
+ +++ C C R F+++ + N+L+ IK+ N + + L + + +
Sbjct: 702 AV-DSKKMCRTCMRPFKNETEMRTFRNRLEGLIKK------NFSSSDEDLKQAEEDYENA 754
Query: 756 KPV---YENIMKLQDTDIPSLRSKLIELEENVIETKGE-LKKLK---TALETPKTKEKTA 808
+ Y+ ++L +T IP L EE K E LKKL+ T ++ K++
Sbjct: 755 RMANTDYDTWLRLTETAIPELEKN----EEQYQSQKEEILKKLESHDTTVDDRAEKKREI 810
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV--DLDQVLAQQKEKKNELNTF 866
SL +T + + E+ +L+ ++ SK ST V D+ +A EK +
Sbjct: 811 ESLSRTVTSIVRIDSEIKSLRSQIAEVSSKQQQTDSTRVLEDIQNDIAAVGEKSRAIKLT 870
Query: 867 RSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSV 924
SK+ E Q+R + +L +L+ K+++ + ++ +L +E E + M++
Sbjct: 871 ISKLSSEKEQSRDELNRAEL-ALRDVKSNLDNGSHQLEKKTSLLARVE----EYKRMNAK 925
Query: 925 YQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLE 984
+ +E R + +E ++ AQ++ D + + + K E + + +L ++ E
Sbjct: 926 QRESIENADRYIEQLEPEIAKAQAKFDDINRRAESKERELQQALTHLSDRLHQLNLANDE 985
Query: 985 ILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKN 1044
I +Y RG QL R+ ++ + Q+ + + ++ R IN+I+ + + +
Sbjct: 986 IKSYIDRGGPEQLIKSRKELEDIQQQIKTLEGEQSEITRAINKISAQLKDSDNTRRQYSD 1045
Query: 1045 NLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE--------NCVIKYHSQKMRSI-- 1094
NL+ + + ++ +E++ E +++ + E N + + KM +
Sbjct: 1046 NLSYRQSCRLLEEVQDEIQQLEEQNAEIDRSRFKEESERWTRKHNALAAQQASKMGEMKS 1105
Query: 1095 --NRLIR--EYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQKMR 1138
++L++ W Y +++ ++ + DL +Y L+ ++KYHS KM
Sbjct: 1106 KDDQLLQLLADWNTDYKDAAANYKEAHIKVETTKAAVDDLGRYGGALDKAIMKYHSLKME 1165
Query: 1139 SINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
INR++ E W R Y+G D+D I I +D ++ R+YNYRV K G E DMR RCSAG
Sbjct: 1166 EINRIVEELWQRTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGRCSAG 1224
Query: 1199 QRVLACLIIRLFISD---------------------------------------QKNFQL 1219
Q+VLA +IIRL +++ Q NFQL
Sbjct: 1225 QKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKTRQQQANFQL 1284
Query: 1220 IVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
IVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1285 IVITHDEEFLHHMQCGDFSDYYYRVSRNER 1314
>gi|407920745|gb|EKG13927.1| Recombination/repair protein Rad50 [Macrophomina phaseolina MS6]
Length = 1305
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 337/1403 (24%), Positives = 633/1403 (45%), Gaps = 192/1403 (13%)
Query: 9 IMGIRNFPADKNRV---VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNF 65
+ G+R+ + NRV ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 2 LTGLRSVRSFDNRVSETIQFYSPLTLIVGFNGSGKTTIIECLKYATTGELP--------- 52
Query: 66 VHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKN 125
++ GK+F+HDP + + E A VK+ + + RSL L+ K
Sbjct: 53 -----------PNSDRGKSFIHDPNLCGEKEVLAQVKMSFKATSGVKMVSTRSLQLTVKK 101
Query: 126 GKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
+ ++ T + + L Q M +G+S AIL VIFCH
Sbjct: 102 SGQKINRTVKALEGQLLMVKDGERTAISSRVAELNQI----MPQYLGISPAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
QE+S WP+ E +K+ FDEIF+A KY KA+E+IK+ + R ++E+ ++K H + +
Sbjct: 158 QEDSMWPMSEPGALKKRFDEIFEAEKYTKAIENIKLLQKRQKEELGKLKIIEEHAKQDKD 217
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ + +Y ++ E IEE K + ++ + ++ + Q K
Sbjct: 218 KGERAEKRSTELYEEIEQLQLKVE---KIEEERKDVEQRAKEAWDRTAQFENIIAQLNGK 274
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERL-KSQYIQ 355
+ + ++ + +++ +IK++ D+ EL+ L+ ++ + + E +E+L + + I
Sbjct: 275 RIKAATLESNVKDIQENIKEMMDTDE-ELEEHLSKYEERV--QLYNEEQEEKLGRYKVIA 331
Query: 356 EE-KQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
E+ K++ + E + ++G+ E ++E +++ ++ +T + A L + +
Sbjct: 332 EDIKRTDEKLGEKRSEIGRHEANKEAYERQLESRETLVKETAHRLEIRGFDLEINDDQVR 391
Query: 415 EGLIKMSQTTIDKYLSDIKILERT-FSDNENTKQA--EINALIVEKVELESKIKSFKQQI 471
E ++++++ ++ + LER E K A E++ K LE K+ + QI
Sbjct: 392 EFMLRLNRLAKEQQTA----LERARMQKQEELKVANKELSQATQRKTTLEESKKNHRTQI 447
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
N + L+ + QI+++ + L+ L ++ + + + + ++ A Q
Sbjct: 448 ATNDQKLSELQQQIDKIVIDEGRKATLEASLEDIDRRLGKAKDDFSAAEWEAKLTAAKSQ 507
Query: 532 RNELEDELCVIDAEI---SILQAQNITLAEIKSLKNRKESKLADINLLKERH-------- 580
+ +++ +DAE+ S + + L ++ L ++KL H
Sbjct: 508 ERDFDEQKARLDAEMVEASQMAKELAQLHYVRKLLKDTQTKLTTNTAAHREHISKIIGQS 567
Query: 581 ------DRAFHLLF-----DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLE 629
+ F+ + D+ + ++ + L + F +N ++ +++ K L +
Sbjct: 568 WELSTLEMEFNAVLAQRSKDLQESMSQRDGTSRELEQLQFKLNSVKTELSKKHSEL---K 624
Query: 630 ANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL 689
N + + L D++ + F + L+ T ++ Q +V++ + +
Sbjct: 625 INAEHLDQILADEE--------------TPEDFPEALNTATKSVEIAQRDVALSGTMEKF 670
Query: 690 FNSYIGKLEENEPRCPLCTRFF-ESDYSVPGLVNKLKTKIKEIPEQTNNK--KTHIDQLC 746
F + +++ C LC R F ++D P +L+ KI++ ++ + K H +L
Sbjct: 671 FTDCLETFRKHDM-CQLCYRGFKQNDPERPRFPKRLEAKIQQAVDENFEQTLKEHQAELE 729
Query: 747 KQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEEN------VIETKGELKKLKTALET 800
K L+ +P Y ++L+ +IP L + L +LE VIE + E +E
Sbjct: 730 K----LRGAQPAYNTWVRLKSKEIPELEAMLRDLESRRESLVRVIEGQDE-----RVVEC 780
Query: 801 PKTKEKTALSLQGDLTLLDQNIRELNTLQRELER--QESKISG----MRSTGVDLDQVLA 854
K Q ++T + ++++ + + E+E Q+ + SG + VD+ +V
Sbjct: 781 RGLKRDVDFITQ-NVTAIIEDVKAIRGYEAEIEELSQKQQHSGTFRSIEQIQVDIQRVND 839
Query: 855 QQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLT----VQGGAGMLKS 910
Q K KN + + ++ EK++ L+ + D+ ++ T ++ G++
Sbjct: 840 QSKTIKNTITQLSKE-------MDRSREKIRRLENEVRDVRAEITTAVYALREKNGLISQ 892
Query: 911 LEDRKCE-LEGMDSVYQT--ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAK 967
DR+ + E + + QT ELE+L K L AQ++ DA++ KK E
Sbjct: 893 AGDRRNQNTERREFIRQTDQELEDLFPK-------LEQAQAKCDAIQTRGDKKEQEIQET 945
Query: 968 IQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINE 1027
+ T L+ +++ EI Y + G QL R+ ++ L K+ + ++ IN+
Sbjct: 946 RKKITDSLDSLRKASAEINAYLENGGTGQLTTARQELENLQAEKQQLEKEQKQLTSDINK 1005
Query: 1028 INQSIANQSLEEIDLKNNLTL---LEKKEAVAKLNEELK-----------LSEIMISDLT 1073
I + + N + ++++NL L K EAV + +EL+ E
Sbjct: 1006 IKEQLRNHTDTRREIQDNLRYRISLRKLEAVRQQIQELEEHNAEADRDRCQKEANAWQRK 1065
Query: 1074 KYHHTLENCVIKYHSQ-KMRSINRLIREYWTRIYQ------------LKLSEIMISDLTK 1120
+ E+ + ++ K + R + E W Y+ ++ ++ DL +
Sbjct: 1066 RERLAAESATLVGEARTKDEQLKRFLEE-WDTDYKDAAKNYKEAHIKVETTKAACEDLGR 1124
Query: 1121 YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRV 1180
Y L+ ++KYHS K+ INR+I E W + YQG D+D I I ++ T S K R+YNYRV
Sbjct: 1125 YGGALDKAIVKYHSLKLEEINRIIEELWRKTYQGTDVDTIMIRSENET-SNKTRSYNYRV 1183
Query: 1181 VQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYV 1240
V K E DMR RCSAGQ+VLA +IIRL +++ +I D E T +DR +
Sbjct: 1184 VMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALD----EPTTNLDRDNI 1239
Query: 1241 VRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
+ALAE+ + I+ Q NFQLIVITHDEEF+ + +
Sbjct: 1240 -------RALAESLAEI--------------IRVRRQQSNFQLIVITHDEEFLRYMQCAE 1278
Query: 1301 RA-YVVRIVRDHKGLSDIHLRSL 1322
+ Y R+ R+ K S I +S+
Sbjct: 1279 FSDYYYRVSRNEKQKSTIEKQSI 1301
>gi|443925117|gb|ELU44037.1| RAD50 protein [Rhizoctonia solani AG-1 IA]
Length = 1378
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 356/1454 (24%), Positives = 641/1454 (44%), Gaps = 308/1454 (21%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A L++L I GIR+F V+ F P+T+IVG NG GKT
Sbjct: 79 ASLNKLAIRGIRSFDDKSVSVIEFYSPVTVIVGHNGSGKTV------------------- 119
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLL 121
+++ + G FVHDP++ + E A VKL+ N + VR+L +
Sbjct: 120 ------------REQPPNTRGGAFVHDPKMANEKEVKAQVKLRFFAANRTRMLAVRNLAV 167
Query: 122 SNKNGKDNCATRDTTISRKIFATGVQK----NLGCLQQESVLEMCNLIGVSKAILNNVIF 177
+ K T + ++ A K + C + ++ E+ +L+GVSK++L NVIF
Sbjct: 168 TVTKAKMTMKTLEGILATSDGAKDNNKRGVISTKCAELDA--EIPHLLGVSKSVLENVIF 225
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI------------------------ 213
CHQE+S WPL E +K+ FD+IF+AT+Y KAL++I
Sbjct: 226 CHQEDSYWPLAEASVLKKKFDDIFEATRYTKALDNIKSLRKERVADLKADKERLHSLGLE 285
Query: 214 KIQRDRLRKEIPEI----------KAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELH 263
K DRL+ +I E+ +A L+ + A++K Y++ + Q F ++
Sbjct: 286 KAHADRLKSKIDELTNQVAEKTQESEETEAGLDAQVAANTK---FYDSATRFQQIFLKVE 342
Query: 264 NIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKA 323
++EE + ++ + E ++ ++++ K++ D C + ++ KA
Sbjct: 343 HLEERRSQV---ILNMEELKKTVTLVDDPTDVLKSKVDNYDAHC-----ANQRTKRATKA 394
Query: 324 E--LQSKLNLFKINLDEK-----CSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLER 376
LQ + +L + D + C E+ Q +++ Q++T+ N K R
Sbjct: 395 TELLQEEDSLAEARQDHQEAVNMCGEMRGQAKVR--------QTNTNCNILNAK-----R 441
Query: 377 DEETHKKLNDTLKTKLN---NLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIK 433
D E + + TK N + LD + ++ GE + + +++ ++ +
Sbjct: 442 DTEI-----NNIGTKYGIRPNTSANGSLDRDSVVEFNARLGE-MARAQALELERLQNEYE 495
Query: 434 ILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQS 493
+ + + Q E NAL EK ++ K Q++ N+ +QI+ S
Sbjct: 496 VKSNEYQSKKTELQTEENALKHEK-------ETLKTQMQRNR-------SQISTAETSLD 541
Query: 494 TLQVLQTKLNRVNSEI----DQLSKSLDPDQLKNEIEAWIRQR-NEL---EDELCVIDAE 545
TL++L+T+L S + D+LS + Q ++ E+ I +R N L DE + +
Sbjct: 542 TLRLLETELKLAASAVLDAYDRLSAAKAAAQ-ESSFESQIAERTNALGIKTDERERLQQK 600
Query: 546 ISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE-ENFKNSLDKAL 604
++ LQ+Q T A++ + K A+I+ + H+ F + E + + +D+AL
Sbjct: 601 LADLQSQAETRAKLGLKRADFSRKQAEIDTIIGIHNERFKAILGTDAEADTMERDVDQAL 660
Query: 605 SSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGS----- 659
+I R++ D +A + ++++E+ +++ + +R ++ L L R++ L
Sbjct: 661 IIKDKEIARLEADASAASREMHSVESALTSYREQIRKKEAELKALEQRIKSGLADSEHST 720
Query: 660 -----KPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESD 714
K + ELD LE + Q E + F S I K + +C +C R + D
Sbjct: 721 VGPAIKAAQAELDNW-LEREIGQHEGAGH------FYSKILKDGKTHKKCVICNRKMDED 773
Query: 715 Y------SVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRS--------LQELKPVYE 760
+V G + K TK E CKQ R LQ L PV E
Sbjct: 774 QLIEFEKTVGGHIQKRDTKYLE--------------ECKQSREDWAAEVGRLQALLPVEE 819
Query: 761 NIMKLQDTDIPSLRSKLIELEENVIETKGELKKL---KTALETPKTKEKTALSLQGDLTL 817
KL+D ++P+++ + EL+ + E +++ +TA++ K+ +K SL+
Sbjct: 820 TRDKLRDEELPAMQIRAEELDSKTAKATAEAQEVCDTETAVKAVKSIQKELQSLKSQAGF 879
Query: 818 LDQNIRELNTLQRELERQESKISGMRSTG------VDLDQVLAQQKEKKNELNTFRSKIE 871
+ + +E+ +LQRE+++ E ++ ST ++DQ A K E +
Sbjct: 880 ITRTQQEVKSLQREIQQHERDLAATGSTQTAEEVQAEIDQCGAHIKTLDRERTSL----- 934
Query: 872 SGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE 931
+ + + Q+L+ +N+ S+QL + + ++D+ + ++++ + LE
Sbjct: 935 -----MAERDRQYQTLRTLENEYSSRQLE---ESELKNRMKDQDSITKEIETLTKDNLEA 986
Query: 932 LGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGA-------KIQDYTKQLEEVKRIKLE 984
R + I+ +L AQ L L++E K+ +E + K+Q+ ++ ++ I
Sbjct: 987 SAR-LKAIDGKLAGAQQPLQRLEQEQKRFQSEHNSTISLVSRKVQELNSAIDRLENISAP 1045
Query: 985 I-----LNYTK-------RGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSI 1032
I L+ +K R T+++ S+ +L Q +++ + +R I+E ++
Sbjct: 1046 IERSKFLDVSKNRYDRALRQCETRVSEAAISIAELEQSVQELREELAEIDREIHEAGATL 1105
Query: 1033 A----NQSLEEI--DLKNNLT------LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE 1080
A N SL ++ D++N T L + A A+ +E ++ + + L L
Sbjct: 1106 AKFRDNLSLRKMKQDIENIQTEIAQHDLEQAGAAKAQFDERYQIEKDKENKLRSKQARLA 1165
Query: 1081 NCV------IKYHSQKMRSINRLIREYWTR-IYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
+ +K Q++ S + I E +T+ + Q+K++++ +DL KY L+N ++KYH
Sbjct: 1166 GELGILKSQLKSSKQELASQFQGINEKYTKQLVQVKMADMANNDLEKYAKALDNAIMKYH 1225
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
+ KM +N +R W + YQG TG +YNYRVV K+ +E DMR
Sbjct: 1226 ALKMEEVNDTMRHLWNKTYQG-------------TGGWPTASYNYRVVMMKDQVEMDMRG 1272
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQ++LA +IIRL +SD +
Sbjct: 1273 RCSAGQKMLASIIIRLALSD---------------------------------------S 1293
Query: 1254 FSRNCGIFALDEPTTNLDIKN----ASD----------QKNFQLIVITHDEEFIENLTAI 1299
F +NCGI ALDEPT LD +N AS NFQLI+ITHDE F+ L
Sbjct: 1294 FGQNCGILALDEPTNALDTENIDALASSLVDIINERRHLSNFQLIIITHDESFLRKLGQA 1353
Query: 1300 D-RAYVVRIVRDHK 1312
+ Y R+ RD +
Sbjct: 1354 EVMEYYWRVSRDSR 1367
>gi|189197015|ref|XP_001934845.1| DNA repair protein rad50 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980793|gb|EDU47419.1| DNA repair protein rad50 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1306
Score = 269 bits (688), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 340/1380 (24%), Positives = 609/1380 (44%), Gaps = 181/1380 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I G+R+F +K ++F PLTLIVG NG GKTTIIE +K+A T + P +
Sbjct: 1 MSKIDRMMIQGVRSFGPEKGETIQFTAPLTLIVGWNGSGKTTIIESLKYATTGDLPTQSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G F+HDP++ + E A VKL + + V R+L
Sbjct: 61 TGGAFIHDPKLRNEKELLAQ--------------------VKLSFRSTSGVRMVVTRNLQ 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
++ K + T + ++ + G + ++ E + +GVSKAIL+NVIFCHQ
Sbjct: 101 VTVKKNTKSQKTLEGSLL--MVKDGEKHSISTRVAELDQIIPQYLGVSKAILDNVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDR----LRKEIPEIKAHYQATL 235
E+S WPL + +K+ FDEIF+A KY KA+E+IK I++DR + I E A T
Sbjct: 159 EDSLWPLSDASTLKKKFDEIFEAMKYTKAIENIKGIRKDRNIELGQLNIIEANAKEDKT- 217
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERN-------MSV 288
KK D + +L F+E+ + + ++ K + +K +
Sbjct: 218 RAKKSEDRQAKL-----------FDEIEKLRDMYTDLDAKCTEAQQKASDSYNHAARFEQ 266
Query: 289 MSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER 348
+ Q + K+ ++ +++ EL+ S+K+L D+ ELQS L+ ++ + +++ +
Sbjct: 267 IVAQLEAKRMTLNINKQNVAELQDSMKELGESDE-ELQSMLDQYEERVATYATQVAELKE 325
Query: 349 LKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKK----LNDTLKTKLNNLADTLCLDTT 404
++ Q +Q+ + Q ++GK E +E H++ +T+K A D
Sbjct: 326 EYHEFKQHLEQNRGALGAKQSEIGKYEAQKEQHERQMQQRENTIKEAAKRHA-IRGFDYD 384
Query: 405 AKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKI 464
+ PE + L KMS+ D+ + + E T D + Q +N L K L
Sbjct: 385 ITEKQVPEFQQILSKMSR---DQNRALERAREETQRDLRDA-QGVLNKLNTRKSGLSQSK 440
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
++ + QI N K ++ + +N++ + + +LQ + V ++ + + ++ +
Sbjct: 441 EAARSQIMTNDKRISELQRTMNQIKADEGSEAILQERKQDVEKQLQDATAASASERYEER 500
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
I R LED + AE Q A I + + + +K+ H +
Sbjct: 501 ISEAARNLQTLEDRKERLTAEFGDASKQARESASIDVKREELGRQQHSLATMKKVHGKRL 560
Query: 585 HLLFD-----MIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL 639
L D E F+ L + + +R DI + L + +S+S
Sbjct: 561 SQLVDSEWDPATLEATFQQVLSEKAGKVKEAASR--RDI--AQTKLDKVNFQLSSSESQA 616
Query: 640 RDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS---YIGK 696
+ +++ L + +++ + D D +L +EE +S + F++ Y+ K
Sbjct: 617 KQKRKELQKYETKVKEAIQKDDVSD-FDETLQQL---EEEYEASSSDKAKFDAQIDYMTK 672
Query: 697 LEENEPR---CPLCTRFF----ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ 749
E+ + C LCTR + D++ G + KLK I + + + + D++ +
Sbjct: 673 CLESAEKHNICRLCTRSLHDDEDEDFTTAGFIKKLKDIIAKA--KNTMQADNADEIFAEL 730
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIEL--EENVI-----ETKGELKKLKTALETPK 802
+ + KP YE +L+ ++P ++ + L E + + E + L+ + +
Sbjct: 731 EAARNAKPSYELATRLRQNELPDIQKTITNLASERDTLNKQLEEQDAVIHDLEAEKQEVE 790
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNE 862
K S+ G T ++EL +EL Q+ K +G+ S G+D Q QQ
Sbjct: 791 ALSKEVQSIVGYYT----RVQELEVEIKELA-QKQKSAGL-SRGIDAIQSDLQQVS---- 840
Query: 863 LNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGML----------KSLE 912
+ G++ N+ ++ + + K +N I S +L+V+ L ++L
Sbjct: 841 --------DDGRSARNTLDQLVAARDKARNLITSLELSVRDINAELHNAQSKLKEKRALA 892
Query: 913 DRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKL---NEEGAKIQ 969
+R E + ++ + + L + + I ++ AQ + D + + ++ ++E +K+
Sbjct: 893 ERIEEFKRENNNQREAMRSLDQDMDNINPEIEQAQYKYDDINRRGNDRVHRTHDEASKLS 952
Query: 970 DYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN 1029
+ +QLE+ EI Y RG QL ++ L I R I ++
Sbjct: 953 ESLRQLEKANE---EINAYISRGGPQQLERTHRDIENLQGEIVRIETDMVNLTRKIKKLE 1009
Query: 1030 QSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL-KL-SEIMISDLTKYHHTLENCVIKYH 1087
++ + + + NL + K ++ L E+ KL E D Y E+ +KY
Sbjct: 1010 DTMRDTDMSRRTITENLRYRKAKRSLETLQIEIEKLEGEGAERDKEHYEREAEHWDLKYR 1069
Query: 1088 S-------------QKMRSINRLIREYWTRIYQ------------LKLSEIMISDLTKYH 1122
K + L+ EY + +Y+ ++ ++ I DL +Y
Sbjct: 1070 QLNIDKTGVERDMKNKDDQLTELMEEY-SNLYKDSAQQYREAHIRVETTKAAIEDLGRYA 1128
Query: 1123 HTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQ 1182
L+ ++KYH+ KM INR++ E W YQG D+D I IA+D G G + R YNYRVV
Sbjct: 1129 GALDKAIMKYHTLKMEEINRILAELWRNAYQGTDVDTIRIASD-GDG-KGNRVYNYRVVM 1186
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISD--QKNFQLIVITHDEEFIENLTAIDRAYV 1240
K E DMR RCSAGQ+VLA ++IRL +++ N LI + E T +D+ +
Sbjct: 1187 IKQDTEMDMRGRCSAGQKVLASIVIRLALAECFGTNCGLIALD------EPTTNLDQQNI 1240
Query: 1241 VRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
K LAE+ S+ I+ Q NFQL+VITHDE+F+ + D
Sbjct: 1241 -------KGLAESLSQI--------------IQTRRKQANFQLLVITHDEQFLREMNCAD 1279
>gi|358390888|gb|EHK40293.1| hypothetical protein TRIATDRAFT_252710 [Trichoderma atroviride IMI
206040]
Length = 1308
Score = 269 bits (688), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 354/1397 (25%), Positives = 645/1397 (46%), Gaps = 168/1397 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSRIDKLSISGVRSFSPAVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ G+K E A VKLQ N+ RS+
Sbjct: 61 VGGAFIHDPKLA-------------------GEK-EVLAQVKLQFRSINDRQHVATRSMQ 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ + + EM +GVS+A+L+ VIFCH
Sbjct: 101 LTAKKNTRSLKTLDCSL---VVVNNGERTTTSTRTAQLDEMIPERLGVSRAVLDAVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA+E++K+ R + +++ ++ AH +A +
Sbjct: 158 QDESLWPLSEPSALKKRFDEIFEAQKYTKAIENLKVLRKKQVEQLSMLQNDEAHNKANKD 217
Query: 237 YKKEADSKKQLIYNNTQK-RDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ A+ + + + RDQ E +E M+ ++ Q E+ + +
Sbjct: 218 RGERAEKRMSGLQTEIESARDQC--EALTVE--MQETQVRIKQKHEQANSFLQIVQNLSN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY-- 353
K+ + + Q++ NEL+ +I +L D A L+ L+ ++ ++ E E K+QY
Sbjct: 274 KREQLEYRQDAINELKQTIDELPETDDA-LERALSQYEESMGRYQEEAEQN---KAQYAE 329
Query: 354 IQEEKQSHTHINEAQM-KLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT-- 410
+Q+E +H A++ + GKL+ D+E +++ LK ++ L A SQY
Sbjct: 330 LQQELTNHRQSQSAKLAEQGKLQSDKEKYER---QLKARVQ-------LVQEAASQYNFR 379
Query: 411 ---PEEGEGLIKMSQTTIDKYLSDIKI-LERTFSDNENTKQAEINALIVEKVELESKIKS 466
+ + I++ Q I K L++ + LER +N AE++ ELE + K+
Sbjct: 380 GFDEDVSDQHIQVFQDKIQKLLTEKRRELERLQKEN----AAELDKATGVITELEGR-KA 434
Query: 467 FKQQIEGNKKDLTNVITQINEVNQSQS-TLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
+ Q + K I + V Q+++ + V + ++ ++D+L Q + E
Sbjct: 435 ARTQDRVSAKQRMGAIEKRTSVLQNEAGNIDVDEGAKAILDGQLDELESRFKHAQQELEK 494
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
W +Q E D+ +D E L + + + S + + E + +++ K + D
Sbjct: 495 SNWDQQLTEANDKQWQLDNENEKLGRELVECTRLASERAQLELRKKEMSDRKRKLDTLIE 554
Query: 586 ---------LLFDMIP---EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVS 633
L D P E F++ + ++ R + ++K Y L+
Sbjct: 555 TWKPKLSNTLGDDWEPHTLESRFQSIQSRQSKAVQEAQKRRDQTRQKQQKVEYRLKTAKE 614
Query: 634 NSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSY 693
K ++ + +++ ++ V + ED +D V ++ +E + ++ LF+ Y
Sbjct: 615 THGKKTQEMNQMKQKVVAALQNVRDNAVVEDYVDEVAAVEQQVEELRTDLSLFDALFDYY 674
Query: 694 --IGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKE--IPEQTNNKKTHIDQLCKQQ 749
++ + + +C LC R F+ S +++L KI + P+ + + + +
Sbjct: 675 NKCKRMLDTQKKCRLCDRHFDDGQSAA--LDRLSKKIDKHLDPKGKVDTEKDLKEAVDNL 732
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIET-KGELKKLKTALETPKTKEKTA 808
+L+ ++ ++ +L ++P+L+ + + EN ET + EL+ + + K +
Sbjct: 733 EALRAVRSAFDTYERLS-AELPALQDEW-KTAENEFETLEKELEDEDALVAAAEEKLRDL 790
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV--DLDQVLAQQKEKKNELNTF 866
L + + Q +RE+ + +++R +S S GV ++++ Q ++ T
Sbjct: 791 GDLSKTVANISQTVREIKDAETQVDR---IVSQQSSGGVTRSVEEIHELQSSISEQIRTL 847
Query: 867 RSKIESGQTRLNSHNEKLQ----SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM- 921
++KI T+L + ++++ SL+ +K+++ +K + AG L+ +D + +++ +
Sbjct: 848 KNKI----TKLTADRQRMKDQVNSLELEKSELRNK---IGRAAGQLEKKKDLQNQIQSLK 900
Query: 922 -DSVYQTEL-----EELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQL 975
D +Q E+ EEL K+ P T+ A+ E + ++ + +E I T +
Sbjct: 901 EDYTHQREVIQRTDEEL-EKLEPSITEARSARDETLRHGRSKEQVITDERDAI---TSSI 956
Query: 976 EEVKRIKLEILNYTKRGTLTQLAALRESVQKLN---QRKEDIIAKRGVCERTINEINQSI 1032
E+K++ +I +Y RG +T L++ + ++ L+ E IA V RT N++ Q I
Sbjct: 957 AEIKKMDNDIQDYVDRGGMTNLSSNQRALASLDTAISTTEKEIADLTV--RT-NKLKQDI 1013
Query: 1033 ANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISD-----LTKYHHTLEN------ 1081
+ + + +NL + + L ++++ E + L +LEN
Sbjct: 1014 DSGDRKRKNFNDNLNYRKHLRTLDVLRKDIEDLEDRNAHEDYERLEAEARSLENTANRLL 1073
Query: 1082 ----CVIKYHSQKMRSINRLIRE-----------YWTRIYQLKLSEIMISDLTKYHHTLE 1126
V+ K + RL++E Y +++ ++ I DLT+ ++
Sbjct: 1074 AERGSVMGTMKSKDEELGRLLQEWDMDFKDAKHKYRESHIRVETTKAAIQDLTQCGSAVD 1133
Query: 1127 NCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNG 1186
V++YHS KM +NR+ E W YQG DID I I +D T + K R YNYR+ K
Sbjct: 1134 KAVMQYHSMKMEDVNRIASELWQTTYQGTDIDTILIRSDNETANNK-RNYNYRLCMVKQD 1192
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRD 1246
E DMR RCSAGQ+VLA +IIRL +++ +I DE T +DR +
Sbjct: 1193 TEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEP----TTNLDRDNI------ 1242
Query: 1247 HKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVV 1305
K+LAE+ R IK Q NFQLIVITHDEEF+ ++ D
Sbjct: 1243 -KSLAESLHRI--------------IKTRQQQSNFQLIVITHDEEFLRHMRCSDFCDSFF 1287
Query: 1306 RIVRDHKGLSDIHLRSL 1322
R+ RD K S I S+
Sbjct: 1288 RVKRDEKQNSVISRESI 1304
>gi|367012381|ref|XP_003680691.1| hypothetical protein TDEL_0C05910 [Torulaspora delbrueckii]
gi|359748350|emb|CCE91480.1| hypothetical protein TDEL_0C05910 [Torulaspora delbrueckii]
Length = 1305
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 353/1384 (25%), Positives = 603/1384 (43%), Gaps = 230/1384 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A + + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGSNGSGKTTIIECLKYATSGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS-- 118
S G FVHDP+I + A VKL T NN + V R+
Sbjct: 59 -------------------SKGGAFVHDPKITGDKDIRAQVKLAFTSANNLNMIVTRNIQ 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
LL+ I + G + L E ++ +GV KAIL VIFC
Sbjct: 100 LLVKKTTTTFKTLEGQLVI---VNGNGNRNTLSTRSVELDTQVPLYMGVPKAILEYVIFC 156
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNY 237
HQE+S WPL E +K+ FDEIF A K+ KAL+S+K ++K++ +IK Q+ +
Sbjct: 157 HQEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDSLK----GIKKDMSVDIKLLKQSVEHL 212
Query: 238 KKEADSKKQLIYNNTQ--KRDQSFE-ELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
+ + D K N +Q + S++ E+ NIEE + I E+ +L + ++ + + +
Sbjct: 213 RVDRDRSKATQVNISQLESKIASYQQEVKNIEEQLTDITEQSDRLFKSNQDFQKVLSMSE 272
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQE----RLK 350
K R+ I++ L S+I L K L+ L F +L EK E+ E +K
Sbjct: 273 NLKNNRESIKDQIKRLSSAI-DLIDLPKPALEQLLFNFSSSLHEKEEEVMRLEAVVKSMK 331
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLK---TKLNNLADTLCLDTTAKS 407
S I+ + + I + G+L ++ TH++ +TLK L N D T
Sbjct: 332 SHAIELQNDCNVLIR----RQGELTANKVTHERNLETLKHMEQDLTNAYGASFGDKTTGD 387
Query: 408 QYTPEEGEGLIKMSQ------TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELE 461
T + K+ Q + DK L D L + SD ++ A IV+
Sbjct: 388 NITGQLKSIRDKLEQERNEFVSGGDKELKD---LNKELSDAKH-------AAIVQS---- 433
Query: 462 SKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP--- 518
+++E NKKD + ++IN + + L+ LN +++ ++ L
Sbjct: 434 -------ERLEYNKKDTIKLASEINRLGTELTVLEFTNEDLNNEKESLNKFTEKLKDLEK 486
Query: 519 -DQLKNEIEAWIRQRNE----LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADI 573
D + N I I+++N LE++L + IS Q A++ +K + K ++
Sbjct: 487 QDNISN-INLQIKEKNNKMIILENDLETLQGRISKTSEQADLFAKLSFIKKAIQEKRQEL 545
Query: 574 NLLKERHDRAFHLLFDMIPEE---NFKNSLDKALSSITFDINR----IQEDINAKEKHLY 626
+R F + D + ++ N+ +D D+ + ++ +K
Sbjct: 546 ----QRRIEGFQI--DSVAKKLNLNYGPDIDIEFKKSYLDLQKNFTNKRQKFQVADKKYT 599
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSK-PFEDELDRVT---LELKREQEEVSM 682
+ ++ L+D + + L ++ L P E+ D V L + E + M
Sbjct: 600 EVSLKLTQVENELKDNEILASNLAKKLSNSLPEDCPIEEYDDAVVESDLSYRTALENLKM 659
Query: 683 MTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQT-----NN 737
+T FN ++ E E C LC+R FE++ L+ KL+ K+ EQT +
Sbjct: 660 HQTT-VEFNKKALEVAEREDSCYLCSRKFETEQFRSSLLAKLRVKVDSRFEQTLKSTLKD 718
Query: 738 KKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLI-------------ELEENV 784
+K ++D L + + LK I++L+ + + ++ ++EE+
Sbjct: 719 EKEYLDTLRSLKEDILALKTAKNKIVELKSSMVGIVKKVEELKKEKDEYEIDNNKMEEDK 778
Query: 785 IETKGELKKL-----KTALETPKTKEKTA-----LSLQGDLTLLDQNIRELNTLQRELER 834
+GEL+ +T E +E++ L+L G + + + EL QRE
Sbjct: 779 KYVEGELRSTVEYFTRTKREVKHLEEQSKTISDELALYGTVEDGVKTVDELQIAQREKNE 838
Query: 835 QESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDI 894
Q +R+ +++ + Q++ K E S I+ +++ L + ++DI
Sbjct: 839 Q------LRTLRKEINHLQGQKETKSAEFTRLLSLIKERNSKVGEIERALSVRENIESDI 892
Query: 895 HSKQLTVQGGAGMLKSLE-------DRKCELEGM----DSVYQTELEELGRKVAPIETQL 943
+K V+ L++LE ++ E+EG ++ TE +L + ++ +L
Sbjct: 893 AAKNAQVETLRASLQTLERGMEGQSEKVREIEGRLNNKKQIFDTEFNKLNDSLTVMDKRL 952
Query: 944 N---LAQSELDALKKE--------------HKKKLNEEGAKIQDYTKQLEEVKRIKLEIL 986
N QSE+D+ K E ++K+N+ I+ K+L E R KL
Sbjct: 953 NEFARIQSEIDSFKSEGLQALDVCARQLTEFQEKMNDLNENIESKNKELAEGTR-KL--- 1008
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNL 1046
R + + L+++++ L R ++ EI + I+N +D++N
Sbjct: 1009 ----RDSTNEKRNLKQNIEMLGLRS------------SLGEIEREISN-----LDVRNAE 1047
Query: 1047 TLLEK--KEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1104
+K +E++ N KLS L + L+N + + Q + +Y +
Sbjct: 1048 AERDKYQQESLRLRNRFEKLSSENAGKLGEIKQ-LQNQIQAFTLQLRTDYKDVDSDYHKK 1106
Query: 1105 IYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAA 1164
+L+ + D+ Y L++ ++KYH KM+ INR+I E W R Y G D+D I I +
Sbjct: 1107 WVELQTRTFVTDDIDTYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDVDSIQIRS 1166
Query: 1165 DVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------- 1213
D + + K ++YNYRVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1167 DEVSSNVKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGVNCGVIAL 1226
Query: 1214 ----------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIV 1244
QKNFQLIVITHDE+F+ ++ A + R+
Sbjct: 1227 DEPTTNLDEENIESLAKSLSNIIEMRRHQKNFQLIVITHDEKFLNHMDASQFTDHFFRVK 1286
Query: 1245 RDHK 1248
RD +
Sbjct: 1287 RDDR 1290
>gi|358387565|gb|EHK25159.1| hypothetical protein TRIVIDRAFT_143603 [Trichoderma virens Gv29-8]
Length = 1307
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 355/1417 (25%), Positives = 637/1417 (44%), Gaps = 209/1417 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSRIDKLSISGVRSFSPAVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKLQ N+ RSL
Sbjct: 59 -------------------SKGGAFIHDPKLAGEKEVMAQVKLQFRSINDRQHVATRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTAKKNTRSQKTLDCSL---VVVNNGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA+E++K+ R + +++ +++ AH + +
Sbjct: 157 QDESLWPLSEPSALKKRFDEIFEALKYTKAIENLKVLRKKQVEQLAKLQNDEAHNKVNKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ + + + + ++ ++ + M+ +K+ Q E+ + + K
Sbjct: 217 RGERAEKRMTALQAEIEA---ARDKCESLTKDMEQTQDKIRQKHEQANSFLQIVQNLNNK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + + Q++ NEL +I +L D A L+ L+ ++ ++ E E K+QY +
Sbjct: 274 REQLEYRQDAVNELRQTIDELREDD-ATLERSLSQYEESMGRYQQEAEQN---KAQYAEL 329
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT-----P 411
+K+ H KL + + + K LK ++ L A QY
Sbjct: 330 QKELAKHRQTQSAKLAEQGKHQSDKDKYERQLKARVE-------LIQEAARQYNLRGFDE 382
Query: 412 EEGEGLIKMSQTTIDKYLSDIK-ILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
+ + I+ Q I K L++ K LER +N AE++ ELE + K+ + Q
Sbjct: 383 DLNDQHIQAFQDKIQKLLTEKKRDLERLQKEN----AAELDKATGVITELEGR-KAARTQ 437
Query: 471 IEGNKKDLTNVITQINEVNQSQST---------------LQVLQTKLNRVNSEID----- 510
+ K I + V Q+++ L+ L+++L V E+D
Sbjct: 438 DRVSAKQRMGAIEKRTSVLQNEAGSIDVDEGAKAVLDGQLEELESRLRHVQQEMDKSNWD 497
Query: 511 -QLSKSLDPD-QLKNEIEAWIRQRNELEDELCV-IDAEISILQAQNITLAE----IKSLK 563
QL+++ D QL+NE E R+ E C + +E + L+ + +A+ +++L
Sbjct: 498 QQLTEANDKQWQLENENEKLSRELVE-----CTRLASERAQLELRKKEMADRKRKLETLT 552
Query: 564 NRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAK-- 621
+ KL ++ L D PE S+D S+ N+ +D +
Sbjct: 553 ETWKPKLDNV------------LGADWEPE-----SVDSRFQSVQSRQNKALQDAQKRRD 595
Query: 622 ------EKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKR 675
+K Y L+ K ++ R+ E++ ++ V ED ++ V ++
Sbjct: 596 QTRQKQQKVEYKLKNARETHEKKTQEMARSKQEVVAALQNVRDGAVVEDYMEEVAAVEQQ 655
Query: 676 EQEEVSMMTSTQYLFNSY--IGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEI-- 731
+E + ++ LF+ Y ++ + + RC LC R F D S +++L KI +
Sbjct: 656 VEELRTDLSLFDALFDYYNKCRRMLDTQKRCTLCDRHF--DDSQSAALDRLSKKIDKHLN 713
Query: 732 PEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGEL 791
P+ + + + + SL+ ++ ++ +L ++P+L+S+ V T+GE
Sbjct: 714 PKGKVDTEKDLKEAVDNLESLRAVRSAFDTYERLS-AELPALQSE-------VKTTEGEF 765
Query: 792 KKLKTALETPKT---KEKTALSLQGDL----TLLDQNIRELNTLQRELERQESKISGMRS 844
+ L+ LE E+ L GDL T + Q +RE+ + +++R S+ S
Sbjct: 766 ESLEKQLEEEDAFVVAEEEKLRDLGDLAKTVTNISQTVREIKDAEAQVDRIVSQQSSSGV 825
Query: 845 TGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGG 904
+ ++++ Q +L + ++KI +++ SL+ +K+++ +K +
Sbjct: 826 SRS-VEEIHELQSNLSEQLRSLKNKISKLTADKQRMKDQINSLELEKSELRNK---IGRT 881
Query: 905 AGMLKSLEDRKCELEGMDSVYQTELEELGR---KVAPIETQLNLAQSELDALKKEHKKK- 960
AG L+ +D + +++ + Y + E + R ++ IE + A+S D + + K
Sbjct: 882 AGQLEKKKDLQNQIQTLKEDYTHQREVIQRTDEELEKIEPGIAEARSARDETLRHGRSKE 941
Query: 961 --LNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKL----------- 1007
+ +E I + + E+K + +I +Y RG LT LA+ + ++ L
Sbjct: 942 QVITDERDAIMN---SMSEIKMVDNDIQDYVDRGGLTNLASNQRAIASLETAISTTEKEI 998
Query: 1008 -------NQRKEDIIAKRGVCERTINEINQSI-ANQSLEEID-LKNNLTLLEKKEAVAKL 1058
N+ K+DI + +R I+ +I + L +D L+ ++ LE + A
Sbjct: 999 ADLTVRTNKLKQDIDS----GDRKKKNISDNINYRKHLRTLDVLRTDIEALEDRNAHEDY 1054
Query: 1059 NEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ----------- 1107
E L+ + +++ V+ K + RL++E W Y+
Sbjct: 1055 -ERLQAEARSLENMSNRLLAERGSVMGTMKSKDEELGRLLQE-WEMDYKDAKQKYRESHI 1112
Query: 1108 -LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV 1166
++ ++ I DL++ T++ V+++H+ KM +NR+ E W YQG DID I I +D
Sbjct: 1113 RVETTKAAIEDLSQCTATVDKAVMQFHAMKMAEVNRIAGELWQTTYQGTDIDTILIKSD- 1171
Query: 1167 GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDE 1226
+ +R YNYR+ K E DMR RCSAGQ+VLA ++IRL +++ +I DE
Sbjct: 1172 NENTTGKRNYNYRLCMVKQDTEMDMRGRCSAGQKVLASIVIRLALAESFGVNCGLIALDE 1231
Query: 1227 EFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVI 1286
T +DR + K+LAE+ R I+ Q NFQLIVI
Sbjct: 1232 P----TTNLDRDNI-------KSLAESLHRI--------------IQTRQQQSNFQLIVI 1266
Query: 1287 THDEEFIENLTAIDRA-YVVRIVRDHKGLSDIHLRSL 1322
THDEEF+ ++ D R+ RD K S I S+
Sbjct: 1267 THDEEFLRHMRCSDFCDSFFRVKRDEKQNSVISRESI 1303
>gi|239611181|gb|EEQ88168.1| DNA repair protein Rad50 [Ajellomyces dermatitidis ER-3]
Length = 1470
Score = 267 bits (683), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 318/1341 (23%), Positives = 596/1341 (44%), Gaps = 149/1341 (11%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 171 AKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--- 227
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLL 121
S G F+HDP++ + E A VKL + + RSL L
Sbjct: 228 ------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSMSGARMVATRSLQL 269
Query: 122 SNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQE 181
+ K T + + + G + ++ E M +GVSKAIL++VIFCHQ+
Sbjct: 270 TVKKTTRQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQD 327
Query: 182 NSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEA 241
S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +A
Sbjct: 328 ESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKA 387
Query: 242 DSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERD 301
D ++ ++ + E H + + M+ E + ++ + + + + K+ E
Sbjct: 388 DRAEKRSIKLQEEIEALRAESHELSQQMRKAAELADKAWKESESYAQILGTLEGKRIEAK 447
Query: 302 MIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ-- 359
IQ S L+ + ++ D+ L+ L+ F+ ++ E +E LK +Y+ E KQ
Sbjct: 448 SIQASITNLQEHLVEVDESDEW-LERTLDQFE---SQQIQYREQEESLKEKYM-ELKQVI 502
Query: 360 --SHTHINEAQMKLGKLERDE---ETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ T + Q + GK E D+ E + + L ++ + D +
Sbjct: 503 EDNRTRLGLKQAEYGKHENDKAQFERQLRRREKLIKEIARQNNIHGFDDDLDDMQVSDFM 562
Query: 415 EGLIKMSQ---TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ + K+S+ T+++ + ++ R Q+ +N L K L+ + ++QI
Sbjct: 563 QRIRKLSKDQNQTLERARREAQMELREV-------QSLLNQLSQRKSTLQEVKNAARKQI 615
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
N + + +++E++ + + VL++++ + + + + I+ +
Sbjct: 616 SSNDIEADSHQRRLDEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSE 675
Query: 532 RNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDM 590
LEDE ++AE+ + LA + LK + + + ++ H DR L
Sbjct: 676 IRLLEDESSKLNAELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTRE 735
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
+AL T + R++ D + + L E + + K L+ ++ L + +
Sbjct: 736 WNPSTLDQEYQRALQETTNALTRVERDRDGVSRELEHAEFKLKTTRKDLQQRRNELKQCI 795
Query: 651 DRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR---C 704
++ + +P E D L + ++L +++ + QY Y+ K + + C
Sbjct: 796 QKIRDAVDDEPAEYPDILKQRQVQL-----DMAKKDADQYAGLGEYLSKCMDAAKQKKVC 850
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
+C+R F+++ +NKL +K + ++ + QL + + Q + Y+ ++
Sbjct: 851 RMCSRPFKTEGEFQIFLNKLDALVKRATQDAVDES--MQQLEEDLEAAQGVSTFYDTWVR 908
Query: 765 LQDTDIPSLRSKLIELEENVIETKGEL----KKLKTALETPKTKEKTALSLQGDLTLLDQ 820
L T+IP+L + +LE E ++ K + +E+ K E + ++ ++ D
Sbjct: 909 LSTTEIPALEKEESQLESQREELLSQIEDHDKIVSERVESKKNVESLSKTV-ATISKYDG 967
Query: 821 NIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLN 878
I+ L + ++L + +SG R T D+ + ++ EK EL SK+ E Q+R
Sbjct: 968 EIKTLRSQVQDLLANQQDVSGSR-TLEDIQEHISAIGEKSRELQKIISKLNNEKDQSRT- 1025
Query: 879 SHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAP 938
++ +L+ + D+ S SL R E +++ ++ +E+ +
Sbjct: 1026 ----EITALELKLRDVRSNLDNANYQLEKKASLAARVEEYRKLNAKHRESIEKADHDIES 1081
Query: 939 IETQLNLAQSELD-----ALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGT 993
+ +++ AQ+ D A +EH+ +L E +++ D QL+ EI +Y +RG
Sbjct: 1082 LVPEVSKAQARYDDIASRAEAREHELQL--EASQLSDSLHQLDLANE---EITSYNERGG 1136
Query: 994 LTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
QL + V L + ++G + IN I+ + + + +NL +
Sbjct: 1137 PAQLIKCEKEVHNLESEIASLEKEQGSITKDINAISTRLKDSENTKRQYADNLRYRRETA 1196
Query: 1054 AVAKLN---EEL-----KLSEIMISDLTKYHHTLENCVIKYHSQKMRSI----NRLIR-- 1099
A+ +N EEL ++ + ++ N + + KM + ++L++
Sbjct: 1197 ALEDVNATIEELSAQNAEVDRSRFREESERRTREHNALSARQASKMGEMKSKDDQLMQLL 1256
Query: 1100 EYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREY 1147
W Y +++ ++ + DL +Y L+ ++KYHS KM INR+I E
Sbjct: 1257 ADWNTDYKDATVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRIIEEL 1316
Query: 1148 WTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
W + Y+G D+D I I +D ++ R+YNYRV K E DMR RCSAGQ+VLA +II
Sbjct: 1317 WQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIII 1375
Query: 1208 RLFISD---------------------------------------QKNFQLIVITHDEEF 1228
RL +++ Q NFQLIVITHDEEF
Sbjct: 1376 RLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQANFQLIVITHDEEF 1435
Query: 1229 IENLTAIDRA-YVVRIVRDHK 1248
+ ++ D + Y R+ R+ +
Sbjct: 1436 LRHMQCGDFSDYYYRVSRNER 1456
>gi|378729964|gb|EHY56423.1| DNA repair protein RAD50 [Exophiala dermatitidis NIH/UT8656]
Length = 1305
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 324/1350 (24%), Positives = 591/1350 (43%), Gaps = 163/1350 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L + I GIR+F +RF+ PLTLIVG+NG GKTTIIEC+KFA T P
Sbjct: 1 MSRLHSMEIQGIRSFAEGHPERLRFETPLTLIVGQNGSGKTTIIECLKFAFTGIQPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++G +D + A+V++ D + V R L
Sbjct: 61 VGGAFVHDPKLG--------------NDKMV------RALVRVSFKSAEGDPLVVARRLE 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L+ K + + + +++ I G + + E + + +GVS AIL+NVIFCHQ
Sbjct: 101 LTVKKNSRSLKSLENSLN--ISRHGEKSVISSRVAELDIRIPQALGVSAAILDNVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
+ S WPL + +K+ FDEIF+A KY KA+++IK ++RK+ E Y+ + K
Sbjct: 159 DESFWPLSDPSTLKKKFDEIFEAQKYTKAIDNIK----QIRKKHNEELGKYKIMEAHAK- 213
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKL---VQLTE----KERNMSVMSTQY 293
D + + T R Q EE+ ++ ++ + EK+ +L E K + + +
Sbjct: 214 TDKDRAVKVQRTMSRLQ--EEVESMRAKVEELEEKIKNARRLAEDAWRKGEDYARILGSL 271
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
+ K+ E Q + + L+ ++++ D LQ L+ F+ E E+ R + +Y
Sbjct: 272 EGKRIEAQGRQSTIDSLKLHLEEVSEPDDW-LQETLDEFQTKQQELRDEM---RRRQEEY 327
Query: 354 IQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTL------CLDTTAKS 407
I E Q ++ +L ++ E +L + + L + AK
Sbjct: 328 I-----------ELQDRIKELGKERERKVQLKGKYEQEQEEHERQLVRRKEMVREVAAKH 376
Query: 408 Q---YTPEEGEGLIKMSQTTIDKYLSDIKI------LERTFSDNENTKQAEINALIVEKV 458
Q Y E ++ I K L D + LE T E Q +N L K
Sbjct: 377 QIRGYDDLSDESQVEEFLFRIKKMLKDQRTALDRIKLEHTAERRE--AQTLVNRLTERKA 434
Query: 459 ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
L+ S ++Q++ N ++ + + +++ + + V++++++ +N++I Q ++ +
Sbjct: 435 ALQDNKVSTRKQMDINDREAADFQRRADKIEVDEGSRAVVESRIDHLNAKIRQARQAAEA 494
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNR-KESKLADINLLK 577
+++ + ED ++ EI Q LA + LK KE + + LL
Sbjct: 495 SGWDKKLQEASAELRSYEDLSSRLNDEIVHATKQAEELARLAHLKQELKERQRSLGTLLN 554
Query: 578 ERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
+R +L + + AL S + + + ++ + L L+ K
Sbjct: 555 AHSERINKVLGEDWTPTTVEKVYQGALGSAAGEAASAERERDSVGRELDQLQFR----QK 610
Query: 638 TLRD---QKRTLAELMD---RMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFN 691
T+RD +K+ A D R + G + +E+ L + + + +E+ +
Sbjct: 611 TIRDDLARKKAEAGKCDKEIRQVVQDGPEGYEEALQQAQADAEYAREDSGQFAGLHDYYL 670
Query: 692 SYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQT--NNKKTHIDQLCKQQ 749
+ L+ +P C C R F+ P L K+K +I+ + E+T + T + +
Sbjct: 671 KVLETLKSEKPACRTCARTFKGPND-PAL-EKMKKRIEGLVEKTLAQAESTTSKEAEAEY 728
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTAL 809
R L +L V E KL T+IP+ L L +++K +E + ++
Sbjct: 729 RRLLDLGIVNETFKKLVKTEIPAAEKDLSTLSGEKEALLAKIEKHDKIVEQRQHAKRELE 788
Query: 810 SLQ---GDLTLLDQNIRELNTLQRELERQESKISGMRS---TGVDLDQVLAQQKEKKNEL 863
S+ + D +I+ LN E ++S+ +G R+ +L+ V + + +N +
Sbjct: 789 SIGRTVASIAKYDADIKSLNAQIEEYSAKQSQRAGGRTLEDIREELNAVAEKVRATQNLI 848
Query: 864 NTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDS 923
N R++ E + L++ +L+ L K ++ + ++ A + +E E ++
Sbjct: 849 NRLRTEQEQSRVTLSTMELELRDL---KGELSNVGFQLEKKASLAARVE----EFRALNQ 901
Query: 924 VYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKL 983
+ LE+L + + ++ ++ A+++ + + + K E + ++ + + +
Sbjct: 902 KQRATLEKLDQDIEKLDPEIATAKAKYEDVDQRASAKEQEMSYEQSKLSESVSGLDILND 961
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLK 1043
++ +Y R QLA + + L + E + ++ R IN+IN I +
Sbjct: 962 QVRSYVDRDGPNQLARINRELAHLERELERMQGQQSQLTRDINKINDQIRDSEATRRRYS 1021
Query: 1044 NNLTLLEKKEAVAKLNEELKLSEIMISDLT---------KYHH------TLENCVIKYHS 1088
+NL ++ A+A+L E++ E ++ K+ H L+ V+
Sbjct: 1022 DNLRYRQETRALAQLRIEIEELESKNAEADRDRFQKESEKWTHEHNKLSALQAGVMGEMK 1081
Query: 1089 QKMRSINRLIREYWTRI-----------YQLKLSEIMISDLTKYHHTLENCVIKYHSQKM 1137
K + L+++Y T + +++ ++ + DL +Y L+ ++KYHS KM
Sbjct: 1082 SKDAQLVELLQDYKTDLSDAAIRYKEAHIKVEATKAAVEDLGRYGGALDKAIMKYHSLKM 1141
Query: 1138 RSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSA 1197
IN +I E W + Y+G D+D I I AD +G R+YNYRVV K G E DMR RCSA
Sbjct: 1142 EEINSIIEELWRKTYKGTDVDTIMIRADNESG-RGNRSYNYRVVMVKRGAEMDMRGRCSA 1200
Query: 1198 GQRVLACLIIRLFISD---------------------------------------QKNFQ 1218
GQ+VLA +IIRL +++ Q NFQ
Sbjct: 1201 GQKVLASIIIRLALAECFSANCGLIALDEPTTNLDRENIESLAHSLRDIIKYRQQQANFQ 1260
Query: 1219 LIVITHDEEFIENLTAID-RAYVVRIVRDH 1247
LI+ITHDE+F+ + + Y RI RD
Sbjct: 1261 LIIITHDEDFLRQMDCAEFTGYYYRISRDQ 1290
>gi|327356683|gb|EGE85540.1| DNA repair protein Rad50 [Ajellomyces dermatitidis ATCC 18188]
Length = 1485
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 318/1341 (23%), Positives = 596/1341 (44%), Gaps = 149/1341 (11%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 186 AKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--- 242
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLL 121
S G F+HDP++ + E A VKL + + RSL L
Sbjct: 243 ------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSMSGARMVATRSLQL 284
Query: 122 SNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQE 181
+ K T + + + G + ++ E M +GVSKAIL++VIFCHQ+
Sbjct: 285 TVKKTTRQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQD 342
Query: 182 NSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEA 241
S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +A
Sbjct: 343 ESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKA 402
Query: 242 DSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERD 301
D ++ ++ + E H + + M+ E + ++ + + + + K+ E
Sbjct: 403 DRAEKRSIKLQEEIEALRAESHELSQQMRKAAELADKAWKESESYAQILGTLEGKRIEAK 462
Query: 302 MIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ-- 359
IQ S L+ + ++ D+ L+ L+ F+ ++ E +E LK +Y+ E KQ
Sbjct: 463 SIQASITNLQEHLVEVDESDEW-LERTLDQFE---SQQIQYREQEESLKEKYM-ELKQVI 517
Query: 360 --SHTHINEAQMKLGKLERDE---ETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ T + Q + GK E D+ E + + L ++ + D +
Sbjct: 518 EDNRTRLGLKQAEYGKHENDKAQFERQLRRREKLIKEIARQNNIHGFDDDLDDMQVSDFM 577
Query: 415 EGLIKMSQ---TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ + K+S+ T+++ + ++ R Q+ +N L K L+ + ++QI
Sbjct: 578 QRIRKLSKDQNQTLERARREAQMELREV-------QSLLNQLSQRKSTLQEVKNAARKQI 630
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
N + + +++E++ + + VL++++ + + + + I+ +
Sbjct: 631 SSNDIEADSHQRRLDEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSE 690
Query: 532 RNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDM 590
LEDE ++AE+ + LA + LK + + + ++ H DR L
Sbjct: 691 IRLLEDESSKLNAELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTRE 750
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
+AL T + R++ D + + L E + + K L+ ++ L + +
Sbjct: 751 WNPSTLDQEYQRALQETTNALTRVERDRDGVSRELEHAEFKLKTTRKDLQQRRNELKQCI 810
Query: 651 DRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR---C 704
++ + +P E D L + ++L +++ + QY Y+ K + + C
Sbjct: 811 QKIRDAVDDEPAEYPDILKQRQVQL-----DMAKKDADQYAGLGEYLSKCMDAAKQKKVC 865
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
+C+R F+++ +NKL +K + ++ + QL + + Q + Y+ ++
Sbjct: 866 RMCSRPFKTEGEFQIFLNKLDALVKRATQDAVDES--MQQLEEDLEAAQGVSTFYDTWVR 923
Query: 765 LQDTDIPSLRSKLIELEENVIETKGEL----KKLKTALETPKTKEKTALSLQGDLTLLDQ 820
L T+IP+L + +LE E ++ K + +E+ K E + ++ ++ D
Sbjct: 924 LSTTEIPALEKEESQLESQREELLSQIEDHDKIVSERVESKKNVESLSKTV-ATISKYDG 982
Query: 821 NIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLN 878
I+ L + ++L + +SG R T D+ + ++ EK EL SK+ E Q+R
Sbjct: 983 EIKTLRSQVQDLLANQQDVSGSR-TLEDIQEHISAIGEKSRELQKIISKLNNEKDQSRT- 1040
Query: 879 SHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAP 938
++ +L+ + D+ S SL R E +++ ++ +E+ +
Sbjct: 1041 ----EITALELKLRDVRSNLDNANYQLEKKASLAARVEEYRKLNAKHRESIEKADHDIES 1096
Query: 939 IETQLNLAQSELD-----ALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGT 993
+ +++ AQ+ D A +EH+ +L E +++ D QL+ EI +Y +RG
Sbjct: 1097 LVPEVSKAQARYDDIASRAEAREHELQL--EASQLSDSLHQLDLANE---EITSYNERGG 1151
Query: 994 LTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
QL + V L + ++G + IN I+ + + + +NL +
Sbjct: 1152 PAQLIKCEKEVHNLESEIASLEKEQGSITKDINAISTRLKDSENTKRQYADNLRYRRETA 1211
Query: 1054 AVAKLN---EEL-----KLSEIMISDLTKYHHTLENCVIKYHSQKMRSI----NRLIR-- 1099
A+ +N EEL ++ + ++ N + + KM + ++L++
Sbjct: 1212 ALEDVNATIEELSAQNAEVDRSRFREESERRTREHNALSARQASKMGEMKSKDDQLMQLL 1271
Query: 1100 EYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREY 1147
W Y +++ ++ + DL +Y L+ ++KYHS KM INR+I E
Sbjct: 1272 ADWNTDYKDATVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRIIEEL 1331
Query: 1148 WTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
W + Y+G D+D I I +D ++ R+YNYRV K E DMR RCSAGQ+VLA +II
Sbjct: 1332 WQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIII 1390
Query: 1208 RLFISD---------------------------------------QKNFQLIVITHDEEF 1228
RL +++ Q NFQLIVITHDEEF
Sbjct: 1391 RLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQANFQLIVITHDEEF 1450
Query: 1229 IENLTAIDRA-YVVRIVRDHK 1248
+ ++ D + Y R+ R+ +
Sbjct: 1451 LRHMQCGDFSDYYYRVSRNER 1471
>gi|224008570|ref|XP_002293244.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971370|gb|EED89705.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1403
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 346/1426 (24%), Positives = 631/1426 (44%), Gaps = 264/1426 (18%)
Query: 1 MALLDQLHIMGIRNF-PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
MA + +L I G+R+F P D+ +V+ F PLT+IVG NGCGKTTIIE +K+A+T P G
Sbjct: 1 MASISKLSIRGVRSFSPNDEEQVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPGN 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
SG++FVH DP+ + A +KL+ N ++ V+RS+
Sbjct: 61 KSGQSFVH--------------------DPKSIGQSSVKASIKLRFNNRGNHSMVVIRSM 100
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
++ K N D + TG + +L E ++ +L+GVSK IL +V+FCH
Sbjct: 101 EVTQKKATANFKALDGILRTVDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCH 160
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
QE+SSWPL EG +K+ FD+IFD+T+Y KALE+IK R ++ ++KA + ++K
Sbjct: 161 QEDSSWPLQEGAVLKKRFDDIFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKH 220
Query: 240 EADSKKQLIYNNTQKRDQSFEE-----LHNIEESMKPINE-KLVQLT------------- 280
A ++ Y + + F++ NIEE+ K NE K +QL
Sbjct: 221 AASGFREE-YEECKDKISGFDDEIDRCSKNIEEAKKKHNEAKKIQLAIEEFMSDLDMKRG 279
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSG-----------DKAELQSKL 329
E ER +V++ Q + + Q S +EL +++L DK E +
Sbjct: 280 EFEREEAVLAKQRELLGPDDLTGQYSMDELRGMLRELSDKHHGNQAVRALHDKEEEFEGI 339
Query: 330 NLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLK 389
F L +K ++L + + ++ EK +H + + + KL EE HKK
Sbjct: 340 EKFLEGLRKKTNDLNS----RKGKLEAEKDAHNVVLKQRFKLM-----EEIHKKHGVECD 390
Query: 390 TKLNNLADTLCLDTTAK-----SQYTPEEGEGLIKMSQTTIDKYLS--DIKILERTFSDN 442
DTL T A + +T G TT+D +S DI ER S
Sbjct: 391 VTQTPDDDTLTQATAASRMSHSTVFTSGTG--------TTMDITISQEDIAAFERGLSQK 442
Query: 443 ENT-----------KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQS 491
E T + E +A+ E +L++K + +E +++ + +++ + +
Sbjct: 443 EQTLRNTWEGAKRRHRNEEDAMQKEIADLQAK----RSAVESDRRRINE--SKLEAMREL 496
Query: 492 QSTLQVLQTKLNRV-NSEIDQLSK-SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISIL 549
Q+ + + ++RV S++D+ K + D + ++E+ R R+++ E+ V + ++ +
Sbjct: 497 QAVGNQMSSAISRVRQSDVDEAKKQAADLARTRDELNNGSR-RDDIAKEIKVQEDKLKSI 555
Query: 550 QAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMI----------PEENFKNS 599
++ +I+ + N ++++ ++I++L+++ F L DM+ E N +
Sbjct: 556 ASRIEQDMKIRKVLNDQKNEQSEIDMLEKQVSDEFLGLKDMLKDNSYVLSEHGEHNVTVT 615
Query: 600 LDKALSSITFDINRI-------QEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
+ +S + N I ++D+N + + L ++ L L +L +R
Sbjct: 616 TEDPVSPVEVAANNIRRKHLDAEDDVNRANEAIADLNGKIAEKRAVLSQNNGRLQQLKNR 675
Query: 653 -----------------MELVLGSKPFEDELDRVTLELKREQ---------EEVSMMTST 686
+ +L S ++ +L +T + K + E+S +
Sbjct: 676 ANQLNAEGGAVQKVNNVVSAILRSDLYDPDL--ITADSKPSEIMQFLQDAISELSAIDVK 733
Query: 687 QYLFNSYIGKLEE---NEPRCPLCTR-FFESDYS------VPGLVNKLKTKIKEIPEQTN 736
+ + + L++ + CP C R F + D + + LV+ +++ E+ + N
Sbjct: 734 PEVVSRILKPLKKKGKTDASCPCCLRDFVDMDETTRFMNQMNALVDPDTSELMEMISKKN 793
Query: 737 NKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVI-ETKGELKKLK 795
+ T + ++ R+ + +NI + + + +++ +LE + E +GELK L+
Sbjct: 794 KESTESLERFEKWRT-----AIAQNINEC--IEYTGVNNEIKDLEAFIAAEGEGELKDLQ 846
Query: 796 TALETPKTK----EKTALSLQGDL----TLLDQNIRELNTLQRELERQESKIS---GMRS 844
++ K K +K A SL+ L T+LD R + T + +++ ++ K+ G
Sbjct: 847 DQDQSLKEKLSEKQKEASSLRTLLASLNTILD-TARRIWTKEGQVKEKKEKLKYAFGYAD 905
Query: 845 TG---VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTV 901
G DL+ V A +L E+ T +N +L QK ND S+ +T
Sbjct: 906 LGNETRDLNTVEA-------DLTKSNDAKEAAYTEIN----RLNGEQKDINDKISR-VTN 953
Query: 902 QGGAGMLKSLED------------RKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE 949
Q A + E R+ EL + + +EL + +API T L +S+
Sbjct: 954 QAAAADRNAREKQDAFTRDQEASKRRDELNQLLGKLGDDDKELEKSLAPIRTHLLQKESD 1013
Query: 950 LDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
D ++ + + ++ G +++ + K + + I +I Y ++ + S+ +
Sbjct: 1014 RDRMRTANGYEESKLGEELRGFEKDISRLAEITDKIDFYDNSNKEREILDVETSLNENAD 1073
Query: 1010 RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI 1069
+D AK + I ++ + + + ++ ++NN+ +L+ ++ V + EE+ E
Sbjct: 1074 AIKDEEAKLVSMKPEIEQLKKQVDDSERQKQKIQNNIDVLKLQKEVNDMEEEIGKLEDDA 1133
Query: 1070 SDLTKYHHTL---ENCVIKYHSQKMRSINRLIREYWT---RIYQLKLSE----------- 1112
D+ E I SQ+M+++ R+ R + KL+E
Sbjct: 1134 KDMGGEDAARILNEANTIHRESQEMKAVAEGKRQMLAEQRRALKRKLNEPEYKDVEERHR 1193
Query: 1113 ----------IMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI 1162
I++ DL KY+ L+ +++YH K+ IN++I+E W Y+G DI I I
Sbjct: 1194 VKMIEYETTNIVVGDLDKYYDALDKALLRYHGMKINDINKIIKELWALTYKGEDITNIQI 1253
Query: 1163 AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------- 1213
+D R+YNYR+V K DMR RCSAGQRVLA ++IRL +++
Sbjct: 1254 TSDQDKAGRAARSYNYRIVMSKGNTTMDMRGRCSAGQRVLASIVIRLALAETFCLNCGVM 1313
Query: 1214 ------------------------------QKNFQLIVITHDEEFI 1229
Q NFQL+VITHDE+F+
Sbjct: 1314 ALDEPTTNLDYENKRGLAIALAQIIASRAAQSNFQLVVITHDEDFV 1359
>gi|146422673|ref|XP_001487272.1| hypothetical protein PGUG_00649 [Meyerozyma guilliermondii ATCC 6260]
Length = 1302
Score = 266 bits (679), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 347/1381 (25%), Positives = 628/1381 (45%), Gaps = 232/1381 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L I G+R+F ++ + + F PLTLI G+NGCGKTTIIEC+K+A T + P
Sbjct: 1 MSNLYKLSIQGVRSFDSESSETIEFGFPLTLICGQNGCGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FV+DP I ++ +A VKL N ++ R++
Sbjct: 59 -------------------SKGGTFVNDPSIAARNTVNAQVKLAFQNVNGKSMICTRTMQ 99
Query: 121 LSNKNGKDNCATRDTTISRK--IFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K GK + T+ + I G + + E ++ +G S+AIL+ VIFC
Sbjct: 100 LTKKRGKGVASNTFKTLEGQLSIMDQGQKSTISTKNAELDSQIPVYLGASRAILDYVIFC 159
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQ++S WPL E +K+ FD+IF+A K+ K L+S+K + + +I I + Q K
Sbjct: 160 HQDDSLWPLSEASVLKKRFDDIFEALKFTKVLDSLKTIKKDMSNDIKLIDQNVQHLRVDK 219
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT--- 295
AD + + + + D EE+ N+ +++ EKER + Q+
Sbjct: 220 SRADKIRSKVQSTSVTCDALSEEIANLTSTIE----------EKEREAEALFVSNQSFQE 269
Query: 296 ---KKTERDMIQESCN-ELESSIK--QLFSGDKAELQSKLNLFKINLDEKCSELENQERL 349
+ + Q+SC +LE +K ++ + L S+L+ F+ +L E+ +E
Sbjct: 270 ILSRHEQLQYSQKSCQVQLERIVKNIEILPDSETVLMSRLDNFESHLQERQAE------- 322
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
S E + + +++L L R E + K + T L + + AK
Sbjct: 323 ASMKHNELRALEERLQNLRLELNSLSRTEGSLKLKEELYHTNKQKLVQLIEENLLAKD-- 380
Query: 410 TPEEGEGLIKMSQTTIDKYLSDI-KILERTFSDNENTKQAEINALIVEKV-----ELESK 463
P K + K + D+ +++ S E K + N L E+ E+
Sbjct: 381 -P-------KPNDMNFQKIVDDLDNTIKKASSAYERLKSS--NKLSYEQAASRVHEISET 430
Query: 464 IKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQ--- 520
I +Q+ + ++DL N +QINE + +T Q + +L E+ L DP
Sbjct: 431 ITKLEQRYQYYQQDLLNTRSQINEGRKRLNTQQQQEAELEIHKRELKDLEDKYDPQSHND 490
Query: 521 ----LKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLK---NRKESKLADI 573
L + IE Q +LE + + +++ Q+ TL+++ +K RKE LA
Sbjct: 491 AIKSLDSLIENERSQLAQLESQSDTLGRKVAQASKQSDTLSKVSFIKEGITRKEVTLA-- 548
Query: 574 NLLKERHDRAFHLLFDMIPEENFKNS-LDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
H ++ LF+ + + ++N+ D+ + +T +R+ D+ + E+ ++ + V
Sbjct: 549 -----AHLKSLGSLFEKMIGKQYENTGSDELEAELTKAGSRL--DLKSSEQKNFSRQ--V 599
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGS--KPFEDE----LDRVTLELKREQEEVSMMTST 686
+ + L + + E +D+ + K E+E ++V +L+ + +T
Sbjct: 600 ESLTVKLESTQAQITENLDKTASIKNDIVKVIEEEEIDFYEQVISDLEENHRDALESLNT 659
Query: 687 QYLFNSYIGK---LEENEPRCPLCTRFFESDYSVPGL---VNKLKTKIKEIPEQTNNKKT 740
+ N + K + E+E C LC R F+S PGL + +L+ +K + +T K+
Sbjct: 660 FEVTNQFKIKAIEIAESEKYCTLCLRHFDS----PGLSKFLTELRANVKSMTAETLEKEA 715
Query: 741 HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALET 800
+ + L++ K + I+K + R +L ELE +TK E +++K A E
Sbjct: 716 K-----ETAKELEQAKNINPLILKYR-----QCRQELPELEAK--KTK-ETQQMKDA-EK 761
Query: 801 PKTKEKTAL-SLQGD---LTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQ 856
K K + L SLQGD L L + E++ +++E+E + ++S + + D V Q
Sbjct: 762 LKAKIDSELESLQGDVDSLKALRTPLAEVSRIRKEIEVSQRELSSLEDSLTDYGSVTEQS 821
Query: 857 K-EKKNELNTFRSKIESGQTRLNSHNE----KLQSLQKQKNDIHSKQLTVQGGAGMLKSL 911
E + E++ ++++ + ++ + E K + L + + + K+L + L
Sbjct: 822 PIELQREMDRINREMKALRQSVSDNVESKYVKQRELARLEGRVKDKKLAISVLERALIDQ 881
Query: 912 EDRKCELEGMDSVYQTELEELGRKVAPIETQL------------NLAQSELDALKKEHKK 959
E K ++G Y+ ++ L + + IE +L NL + ++ K E +K
Sbjct: 882 EHEKVAIDG----YEAQVVVLQQSMTEIEQELGIQREKRKEEEENLKRITVEIEKVEQEK 937
Query: 960 --------KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRK 1011
KL ++ + + K+ ++V R+K E ++ ++ + +++KL
Sbjct: 938 EAEINRNHKLKDQVSDLLQNIKEFDDVDRVKFETVS-------NDISTINSNIEKLEVEI 990
Query: 1012 EDIIAKRGVCERTINEINQSIANQSLEEID----------LKNNLTLLEKKEAVAKLNE- 1060
I + E++INE N ++ +Q + +D ++N + +L+ ++A +K NE
Sbjct: 991 LKIQKDMKMVEKSINEAN-NLKSQIRDNLDYRRLQNEMNEIENQIGMLDIEDAQSKRNEY 1049
Query: 1061 -----ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI---YQ----- 1107
E++L I++L H V + Q +R++ + + + YQ
Sbjct: 1050 NERTREIRLE---ITNLNSEHAGKVGEVKQLRDQ-IRTMKEDLNSEYVDVDQRYQAEWVK 1105
Query: 1108 LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG 1167
L+ + + SDL Y L+N ++KYH+ KM SINR++ E W + Y+G D+D I+I +D+
Sbjct: 1106 LQTNMLATSDLQTYSKALDNAIMKYHTHKMESINRILNELWKQTYKGTDVDTIAIKSDIN 1165
Query: 1168 TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------------- 1213
++ R+YNYRVV K E DMR RCSAGQ+VL ++IRL +++
Sbjct: 1166 LQAKGNRSYNYRVVMYKQDCELDMRGRCSAGQKVLTSILIRLALAECFGSNCGIIALDEP 1225
Query: 1214 -------------------------QKNFQLIVITHDEEFIENLTA---IDRAYVVRIVR 1245
QKNFQLIVITHDE+F+ ++ D Y R+ R
Sbjct: 1226 TTNLDVENTESLAQSLNNIIEFRRGQKNFQLIVITHDEKFLSHIGGEQFTDNFY--RVQR 1283
Query: 1246 D 1246
D
Sbjct: 1284 D 1284
>gi|119500032|ref|XP_001266773.1| DNA repair protein Rad50 [Neosartorya fischeri NRRL 181]
gi|119414938|gb|EAW24876.1| DNA repair protein Rad50 [Neosartorya fischeri NRRL 181]
Length = 1306
Score = 265 bits (678), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 313/1370 (22%), Positives = 589/1370 (42%), Gaps = 205/1370 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
+A +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 6 VAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-- 63
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKL + + RSL
Sbjct: 64 -------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSTSGAKMVATRSLQ 104
Query: 121 LSNKNGKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNN 174
L+ K + T+ ++ T + + L Q + +GVS+A+L++
Sbjct: 105 LTVKK----TTRQQKTLEGQLLMVKDGERTAISSRVAELDQI----LPQYLGVSRAVLDS 156
Query: 175 VIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQAT 234
VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q
Sbjct: 157 VIFCHQDESLWPMSEPSVLKKRFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHA 216
Query: 235 LNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQL-TEKERNMSVMSTQY 293
K++AD ++ + + E H + + M+ + E + E E V+ T
Sbjct: 217 KEDKEKADRAEKRSIKLQDEIEALRAETHQLSQEMRRVAELADKAWKESESYARVLGT-L 275
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
+ K+ E +Q + + L+ + +L D+ LQS L F + K + + QE + +
Sbjct: 276 EGKRIEAKSLQSTIDNLKRHLVELDDPDEW-LQSNLEQF----ESKQLQYQQQEEAQKEN 330
Query: 354 IQEEK----QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
E K Q+ + Q + GK E D+ ++ + + +A + + Q
Sbjct: 331 YMEIKDRIEQARQKLGVKQAEYGKYENDKANFERQVERRQRMTREIARSHNIRGFDNIQ- 389
Query: 410 TPEEGEGLIKMSQTTIDKYLSDIK--------ILERTFSDNENT---KQAEINALIVEKV 458
QT ID ++ I+ LER + + Q+ +N + K
Sbjct: 390 -----------DQTDIDDFMRKIRKLLKEQNQALERVKREAQTELREVQSTLNEIGQRKS 438
Query: 459 ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
L+ + K+QI N K+ +N ++NE++ + ++ + ++S ++
Sbjct: 439 ALQESKNAAKRQIGANDKEASNYQAKLNEIDVDEGVQAAVEANIEDISSRLNDAKDRARS 498
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE 578
L EI+ + + LEDE ++AE+ + A + LK + + + +K
Sbjct: 499 ASLDQEIQDVNSELHALEDEGTRLNAELIEATKRAGDFARLDHLKKELKERERSLETMKA 558
Query: 579 RHDR--AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSS 636
H A ++ + P + + L T +++ + + + L +E + +
Sbjct: 559 AHGERLAKYIGANWGPA-TLEQEFQRVLEEETRNVSNAESQRDGVNRELEQVEFKLKTAK 617
Query: 637 KTLRDQKRTLAELMDRMELVLGSKP--FEDELDR--VTLELKREQEEVSMMTSTQYLFNS 692
KTL +++ L + + +P + D L + L++ R E S ++
Sbjct: 618 KTLAQRQKELNSCATEIREAINEEPEEYPDALKQRQAQLDVARRDAEQSAGLGDYFMRCL 677
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
K C LC R F +D +L+ +K+ Q ++ +++ + +
Sbjct: 678 ETAK---QVKACRLCQRAFRADAEFNVFQKRLEGLVKKA--QIGVEEEDVERFEAELDAA 732
Query: 753 QELKPVYENIMKLQDTDIPSL----------RSKLIELEEN-------VIETKGELKKLK 795
+ + Y+ +L T+IP L R +L++ EN +E K +++ L
Sbjct: 733 RAVSTAYDTWTRLSKTEIPDLEKEEDQYVLQRDELLDQLENHDKIVSEKVEKKRDVEALS 792
Query: 796 TALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGM----RSTGVDLDQ 851
+ T E +++ + L N ++ NT R LE + +I+G+ R+ L +
Sbjct: 793 KTVNTIVRYESEIKTIRSQIQDLSANQQD-NTATRTLEDIQEEIAGIGEKTRALKKTLSK 851
Query: 852 VLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSL 911
+ +++ + E+N ++ ++RL+ N K Q ++ + +L +
Sbjct: 852 LTNDREQARTEMNNLELQLRDARSRLD--NAKFQ---------------LERKSDLLARI 894
Query: 912 EDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDY 971
E E + +++ + + + R + + +L Q++ D + + + + E I
Sbjct: 895 E----EYKNLNNQQREAIAKADRDIEELTPELLKYQAQYDDISQRVEAREREMQQGISQL 950
Query: 972 TKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQS 1031
++ + ++ EI +Y +RG +QL R +Q + + A++ + IN+I+
Sbjct: 951 SESIRQLDLATEEIDSYNERGGPSQLERSRRELQTIETEISQLEAEQANITKEINKISAQ 1010
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK- 1090
+ + + +NLT + +A+++ E I DL + ++ K S++
Sbjct: 1011 LKDSENTKRQYSDNLTYRQATRVLAEVSAE-------IEDLAAQNAEVDRSRFKEESERR 1063
Query: 1091 MRSINRLIREYWTRIYQLK--------------------------------LSEIMISDL 1118
R N L + +++ ++K ++ + DL
Sbjct: 1064 TREHNALAAKQASKMGEMKSKDDQLMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDL 1123
Query: 1119 TKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNY 1178
+Y L+ ++KYHS KM IN +I E W + Y+G D+D I I +D ++ R+YNY
Sbjct: 1124 ARYGGALDKAIMKYHSLKMEEINAIIGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNY 1182
Query: 1179 RVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------------- 1213
RV K+G E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1183 RVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRS 1242
Query: 1214 --------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ K
Sbjct: 1243 LAESLHDIIRARQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNEK 1292
>gi|391340299|ref|XP_003744480.1| PREDICTED: DNA repair protein RAD50-like [Metaseiulus occidentalis]
Length = 1261
Score = 264 bits (675), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 329/1298 (25%), Positives = 594/1298 (45%), Gaps = 171/1298 (13%)
Query: 82 GKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKI 141
G+ F+HDP + ++ THA V+L+ T + + + L+ K+ +T DT I K
Sbjct: 11 GQCFIHDPSLTGRNTTHAKVELRLTDAKDRQFDISKIFTLTKKDKTYKFSTTDTNILNK- 69
Query: 142 FATGVQKNLG--CLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDE 199
+NL C+ + M +GV KA++ NVIFCH S WPL EGK +KE FD
Sbjct: 70 ---ETDENLSSKCIDVNAF--MSQALGVPKAVIQNVIFCHHSESDWPLGEGKALKERFDA 124
Query: 200 IFDATKYNKALESIKIQR----------DRLRKEIPEIKAHYQATLNYKKEADSKKQLIY 249
IF ATKY + LE + +R + L+K + E A Y+ L KE KK+ +
Sbjct: 125 IFSATKYVEVLEVLNKERKEIKGRISTSEALKKPVSEKVATYRNEL---KEIGCKKEKLV 181
Query: 250 NNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE 309
+K+D L I + ++ + + + K + ++++ +Y+ E ++ E
Sbjct: 182 --ARKKD-----LIRIRDEVERVFGERNEAERKYQELALIEQEYRRHADEYSSCKKRLQE 234
Query: 310 LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELE-NQERLKSQYIQEEKQSHTHINEAQ 368
L++ + ++ + EL+ +L F + ++ ++E N+ER+K EK+ + + +
Sbjct: 235 LKAGVTEVMDRPRDELEEELENFDSKMLKRKEKVELNKERIKKMKAATEKK-RNEVQDKE 293
Query: 369 MKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDT-TAKSQYTPEEGEGLIKMSQTTIDK 427
+LE + + H++ L L +L +L + S Y ++ +KM I +
Sbjct: 294 RAFVRLESEFKQHQQNISKLIASLKSLDRSLEAGADISLSDYRDKKVSDHVKMFDGKIKE 353
Query: 428 YLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINE 487
+ + FS + Q EI K L++++ S + +G DL++ ++ E
Sbjct: 354 MEQSLGSKRQRFSSELESLQKEIQKQTELKASLKTQLDSLAAKKDGVVMDLSDREDELKE 413
Query: 488 VNQSQSTLQVLQTKLNRVNSEI---DQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDA 544
V + L+ + + ++ QL++ D D+L ++IE ++ N L +A
Sbjct: 414 VACIGNKLEKFDRDIKEMEDKLRTLKQLTEEGDMDELSDKIEELAKRENTL-------NA 466
Query: 545 EISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR----AFHLLFDMIPEENFKNSL 600
E+S + +IKSL+++ K +N LK R R L +P++ + +
Sbjct: 467 ELSNATKSSAIKNKIKSLEDQIGKKANGVNNLKVRITRELKEPLAKLELELPQKEWARAT 526
Query: 601 DKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSK 660
A S + I +++ I K K + + + + K + ++ L EL ++++ +G
Sbjct: 527 RSASSDLEAGIKVLRKSIELKNKEVTKSQTELDMNEKEMSKLQKKLKELRNKIDDEIG-- 584
Query: 661 PFEDELDRVTLELKREQEEV--------SMMTSTQYLFNSYIGKLEEN-----EPRCPLC 707
FE LD E RE EE S+ TQ++++ Y K+ + E CPLC
Sbjct: 585 -FESTLD----ETLRETEETVNEARNRDSIFIGTQHVYSKYKKKIADQRRSRVEQCCPLC 639
Query: 708 TRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQD 767
E D +V L KL+ + E+P+ + + + ++ + L LK + K+++
Sbjct: 640 DTSMEED-AVRKLEQKLEKLMMELPKIRKDSEKEVVEVSAKLSRLNLLKRDDQEREKIEN 698
Query: 768 TDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT 827
+P L SK L + + +L LKT LE+ L G L D +R+L +
Sbjct: 699 DLLPDLESKAKSLRSELQTLRDDLSSLKTDLESKIEIAGVLNRLAGSCDLYDSGVRDLES 758
Query: 828 LQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
L+ +L+++++ + D+D V+ E K + T + Q RL ++ L
Sbjct: 759 LRNDLKKEKN---SLEDDCRDVDDVMRDMNEVKQKKRTLDESYKQKQNRLQEVSDVQVKL 815
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ +N+ QL + GA + +++ S EL ++ ++ IE +L A
Sbjct: 816 GQARNE--KLQLLNKAGA---------EAQIKQAISKLNKELAQIEEEIPTIEKKLRTAN 864
Query: 948 SELDA-------LKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAAL 1000
S L+ L ++ +K+++E A+I ++ EEV ++ + + + ++++A
Sbjct: 865 STLEESESSRQRLARQQEKQIDELQARISKTKQEREEVGKMLRTLEEFEQSDKESKMSAA 924
Query: 1001 RESVQKLNQRKEDIIAKRGVCER---TINEINQSIANQSLEEIDLKNNLTLLEK------ 1051
+ + L K + R CE T ++ + +++ +L +N+ ++ K
Sbjct: 925 TDEITSL---KTEFRRVRDECEEMEETTRQMELEVGSEATRRRELSDNIAIIVKTLELEE 981
Query: 1052 --------KEAVAK-----------LN------EELKLSEIMISDLTKYH----HTLENC 1082
KE +A+ LN E+LK E+ + ++ H H +E
Sbjct: 982 LKQNVDKHKEKLAEHKSGDGDHIDILNRIRDRHEKLKAEELTTA--SEVHNDEKHIMERE 1039
Query: 1083 VIKYHSQKMRSINRLIREYWTRIYQLKLSEIMIS-DLTKYHHTLENCVIKYHSQKMRSIN 1141
I ++ S + +E+ T L+E IS DL + L ++ +H +KM IN
Sbjct: 1040 GI--VRKQFESAEKEYKEWLTN----SLTEKQISRDLDVGYTALNKAILAFHQEKMNLIN 1093
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVGTGSEK---RRTYNYRVVQKKNGIEQDMRNRCSAG 1198
R+IREYW R+Y+GNDID I I + TG+ K +R+Y YRVV + G++QDMR RCSAG
Sbjct: 1094 RIIREYWVRVYKGNDIDQIQIEFNEDTGASKTSTKRSYQYRVVMVRQGVKQDMRARCSAG 1153
Query: 1199 QRVLACLIIRLFISDQKNFQLIVITHDEEFIEN--LTAIDRAYVVRIVRDHKALAETFSR 1256
QRVLAC+I+RL ++ E F + + A+D + K+LAE +
Sbjct: 1154 QRVLACIIVRLALA-------------EAFCDGCAMLALDEPTTNLDFDNMKSLAEILA- 1199
Query: 1257 NCGIFALDEPTTNLDI-KNASDQKNFQLIVITHDEEFI 1293
DI +N +KNFQ++VITHDE FI
Sbjct: 1200 --------------DIVRNRKTEKNFQMVVITHDETFI 1223
>gi|134055356|emb|CAK43910.1| unnamed protein product [Aspergillus niger]
Length = 1294
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 311/1339 (23%), Positives = 596/1339 (44%), Gaps = 159/1339 (11%)
Query: 10 MG--IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVH 67
MG +R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MGSSVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--------- 51
Query: 68 DPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGK 127
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 52 ------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVATRSLQLTVKKTT 99
Query: 128 DNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPL 187
T + + + G + ++ E M +GVSKAIL++VIFCHQ+ S WP+
Sbjct: 100 RQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPM 157
Query: 188 DEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQL 247
E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++AD ++
Sbjct: 158 SEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEKR 217
Query: 248 IYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESC 307
+ + EE H + + M+ + E + ++ + S + + K+ E IQ +
Sbjct: 218 SIKLQDEIEALREETHQLSQEMRRVAELADKAWKESESYSQVLGALEGKRIEAKSIQTTI 277
Query: 308 NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK----QSHTH 363
+ L+ + +L D+ LQS L F + + + + QE K + E K Q+
Sbjct: 278 DNLKRHLVELDDSDEW-LQSNLEQF----ESRQLQYQQQEEAKKENYMELKEQIEQTRQR 332
Query: 364 INEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT 423
+ Q + GK E D+ ++ + + +A + + E + +
Sbjct: 333 LGVKQAEYGKFENDKANFERQVERRQRMTKEVARAHNI-----RGFDNVEDQADVDEFMR 387
Query: 424 TIDKYLSDI-KILERTFSDNEN---TKQAEINALIVEKVELESKIKSFKQQIEGNKKDLT 479
+ K L D ++LER + ++ QA +N + +K L+ + K+QI N ++
Sbjct: 388 RVRKILKDQNQVLERVKKEAQSELRDVQATLNQIGQQKSALQESKNAAKRQIASNDREAA 447
Query: 480 NVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDEL 539
++NE+N + L++ + + S +DQ + EI+ Q +LEDE
Sbjct: 448 TYQGKLNEINVDEGVQAALESNIEDIGSRLDQAKQRARSASWDKEIQNVNSQIRDLEDES 507
Query: 540 CVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFKN 598
+++E+ + LA + LK + + + +K H +R + E+ +
Sbjct: 508 SRLNSELIEATKKAGDLARLDHLKKELKERERSLETMKGAHGERLMKFVNANWSPESLEQ 567
Query: 599 SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLG 658
+ + ++R + + + + L +E + KTL +++ L E + + +
Sbjct: 568 DYQHVIEEESRHVSRAERERDGVSRELEQVEFKMKGVRKTLSQRQKELKECIKEIRDAVD 627
Query: 659 SKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEE---NEPRCPLCTRFFESD 714
+P +E + L+ ++ Q +++ + QY + Y+ E + C LC R F ++
Sbjct: 628 DEP--EEYPEI-LKERQAQLDLARKDAEQYAGVSKYMADCLETVKSANMCRLCMRTFRTE 684
Query: 715 YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLR 774
+ NKL+ +K + I +L + + +E Y+ +L+ T+IP L
Sbjct: 685 NELQTFRNKLEGLVKRAKRVMED--DDIPRLEEDLNTAREASTAYDAWCRLKQTEIPDLE 742
Query: 775 SK-----------LIELEEN--VIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
+ L +LEEN ++ K + KK +E+ T + ++ +
Sbjct: 743 KEEEEYIAQQDKLLSQLEENDKIVSEKADKKK---DVESLSKTVNTIVRYDSEIKAIRSQ 799
Query: 822 IRELNTLQ------RELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQT 875
++EL+T Q R LE + +I+G+ L + L++ +K + + +K+E
Sbjct: 800 VQELSTKQQDTNASRTLEDIQDEIAGIGEKSRALKKTLSKLTHEKEQTLSEMNKLE---- 855
Query: 876 RLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRK 935
LQ L+ K+++ + + ++ A +L +E E + +++ + + + ++
Sbjct: 856 --------LQ-LRDVKSNLDNVKFKLERKADLLARIE----EYKNLNNQQREAIAKADKE 902
Query: 936 VAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLT 995
+ + +L Q++ D + + + + + +I + + +++ EI Y +RG
Sbjct: 903 IEDLTPELLKVQAKYDDISQRAEARERDMQQEISHLYENIHQLELANEEIDAYNERGGPH 962
Query: 996 QLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAV 1055
QL + +Q + ++ ++ + IN+I+ + + + +NLT + ++
Sbjct: 963 QLERSKRELQSIENEISNLEVEQANITKDINKISAQLKDSENTKRQYADNLTYRQATRSL 1022
Query: 1056 AKLNEELK--LSEIMISDLTKYHHTLE------NCVIKYHSQKMRSI----NRLIR--EY 1101
++ EE++ ++ D +++ E N + + KM + ++L++
Sbjct: 1023 DEVTEEIEQLAAQNAEVDRSRFKEESERRAREHNALAAKQASKMGEMKSKDDQLMQLLAD 1082
Query: 1102 WTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
W Y+ ++ ++ + DL +Y L+ ++KYH KM IN +I E W
Sbjct: 1083 WNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIISELWQ 1142
Query: 1150 RIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRL 1209
+ Y+G D+D I I +D ++ R+YNYRV K G E DMR RCSAGQ+VLA +IIRL
Sbjct: 1143 KTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIRL 1201
Query: 1210 FISD---------------------------------------QKNFQLIVITHDEEFIE 1230
+++ Q NFQLIVITHDEEF+
Sbjct: 1202 ALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLR 1261
Query: 1231 NLTAIDRA-YVVRIVRDHK 1248
++ D + Y R+ R+ K
Sbjct: 1262 HMQCGDFSDYYYRVSRNEK 1280
>gi|50304743|ref|XP_452327.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641460|emb|CAH01178.1| KLLA0C02915p [Kluyveromyces lactis]
Length = 1296
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 339/1380 (24%), Positives = 608/1380 (44%), Gaps = 231/1380 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P +
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGTNGSGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
+G F+HDP+I + + A VKL T + V R++
Sbjct: 61 NGA---------------------FIHDPKITGEKDIRAQVKLAFTNAKGVNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFAT--GVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
LL+ KN A T+ ++ A G + L E ++ +GV KAIL+ VIF
Sbjct: 100 LLAKKN-----ANTFKTLEGQLVAINHGERTTLSTRANELDQQIPLYLGVPKAILDYVIF 154
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE+S WPL E +K+ FDEIF A K+ KAL+++K + + +I +K +
Sbjct: 155 CHQEDSLWPLSEPSILKKRFDEIFQAMKFTKALDNLKTIKKDISIDIKLLKQSVEHLKTD 214
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
K + + K I K ++ +E+ +IE + I ++ L + ++ K
Sbjct: 215 KDRSTATKVNISKLENKIEEYQKEVKSIEHDLNIITKESDALFSSNQKFQETLSKLDNLK 274
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL----ENQERLKSQY 353
+ E L+SSI ++ K+EL+ L F+ L+EK EL +ERL S
Sbjct: 275 HNKTSFMEQIQRLQSSI-EILPNSKSELEDMLQNFQRLLEEKNIELFEYQSEKERLLS-L 332
Query: 354 IQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNL----ADTLCLDTTAKSQY 409
+ + + + Q +LG + ET K +T+ T+L+ L +++ + +
Sbjct: 333 LNDCRNEQQEVVRLQGELGSKKNQYETSKIKMNTILTELSELYNISKESVTSEVSTMLHT 392
Query: 410 TPEEGEGLIK---MSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKS 466
+ E L+ +TT+++ LS +L +F+ E S I S
Sbjct: 393 ANKNLESLLAKHHFEETTLEEKLS---VLRNSFAKKEQQL---------------SYISS 434
Query: 467 FKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIE 526
++ K L N ++N+ S+ L+V + LN S++ Q + +++ + I
Sbjct: 435 DLNKLADQTKKLRN---RLNDKRVSEKDLKVEKEALNNYESKLKQ----WNTERIVDAIS 487
Query: 527 AWIRQRNE----LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
I+ +N+ LEDEL VI +I+ + A++ LK + +K D+ +K++ +
Sbjct: 488 TSIKTKNQDILSLEDELEVIQQQITKANQHSDLYAKLSLLKASESTKKKDVETIKKQLEE 547
Query: 583 -------AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNS 635
+F+L D++ + F + LDK D+ +I+ D + K E +
Sbjct: 548 GANLVSVSFNLEGDLLSQ--FNSILDKK----RVDLKKIKNDSDIATKEFIQYENQLQGI 601
Query: 636 SKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSM------MTSTQYL 689
+ + + + + + R++ L P E E+D EL+ +E + M T
Sbjct: 602 EEQIYEIESNITSIESRLKESL---PDEVEIDTYDEELRDSEESYRIALENLKMHKTTLE 658
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLK------------TKIKEIPEQTNN 737
FN ++ +NE C LC R F S L+ LK T KE+ ++
Sbjct: 659 FNLKALEVAKNEDCCYLCQRKFNDVTSSSKLIEDLKARTNKNFQIALETTAKEMETYLHD 718
Query: 738 KKTHIDQLCKQQRSLQELKPVYENIMKLQDT-------------DIPSLRSKLIELEE-- 782
K+ D + ++ +EL + +N +++ + + +L SKL L E
Sbjct: 719 LKSCYDDVLSHRKYQRELSTMKDNYARIKRSTEEKRSNQQEKFHTLQNLESKLATLTEKL 778
Query: 783 -----NVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQES 837
V++T+ EL KL + L + +E+ ++ + D+ + + TL + +R +
Sbjct: 779 QPNVSKVLDTEEELSKLTSDLR--RVEEELSIYIS------DEKLETIETLHSKQKRVNN 830
Query: 838 KISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSK 897
++ +R D+ + Q+++K E N S I + +N+ LQ ++
Sbjct: 831 ELRALRK---DISDLQIQKEDKSKEYNNLLSLIREKNSNINNMESALQEYLNITKEV--- 884
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEH 957
CE E + + E E L +V ++ +++ A L+ K +H
Sbjct: 885 ------------------CENESIIESSEKESEILTEEVNDLKLEISSASGSLNEGKAKH 926
Query: 958 KK---KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDI 1014
++ + E KI+ + E+ +E++ + +L E + +++ E
Sbjct: 927 RQLEVEARERKDKIESQVANVNEL----VELIQNFEINDAPRLIECEEKLTEISNSVESK 982
Query: 1015 IAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTK 1074
A+ E +IN Q + + E ++K N+ LL K + ++ + ++ ++ +
Sbjct: 983 TAEIKSIEDSINNTVQKLKDSDNEFKNIKLNIDLLGLKCELQRIENAISSMDVTHAEQER 1042
Query: 1075 YHHTLENCVIKYHSQKMRSIN-------------------------RLIREYWTRIY-QL 1108
+ ++ ++ +K+ S N + I E++ R + +L
Sbjct: 1043 NKYQEDSLRLRTAYEKLSSENAGKLGEIKQLQNQISNLKNQLQTDYKNIDEHYQREWIKL 1102
Query: 1109 KLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGT 1168
+ ++ D+ Y L++ ++KYHS KM+ INR+I E W R Y G D+D I I D
Sbjct: 1103 QTKSLVTDDIDTYSRALDSAIMKYHSIKMKDINRIIDELWKRTYSGTDVDTIKIKTD-EV 1161
Query: 1169 GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------- 1213
+ + ++YNYRVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1162 SNVRGKSYNYRVVMYKQDAELDMRGRCSAGQKVLAAIIIRLALSETFGVNCGVIALDEPT 1221
Query: 1214 ------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
QKNFQLIVITHDE+F+ ++ A A + ++ RD +
Sbjct: 1222 TNLDEENIESLARSLATIIEVRRHQKNFQLIVITHDEKFLNHMNASSYANHFYKVKRDDR 1281
>gi|157863716|gb|ABV90879.1| DNA repair protein Rad50 [Triticum monococcum]
Length = 1316
Score = 261 bits (668), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 320/1376 (23%), Positives = 608/1376 (44%), Gaps = 173/1376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRGSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQQQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKALHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLS 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
L+ + K L + +++A++ +++ K +D +D E ++ S
Sbjct: 625 KLQKVLDAKRKHLNSKLQSIAKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + K+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-EKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ +++ E K+ R GV +D++ +
Sbjct: 790 QVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDEIQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKER 1081
Query: 1082 CVIKYH------SQKMRSINR------------LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y+ S +I+R + + Y+ ++ QLK +E+ DL +Y+
Sbjct: 1082 LLSEYNRCRGTISVYQSNISRHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQ 1182
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVM 1198
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RA 1238
+ G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1199 QNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAA 1257
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ K Q+NFQLI+ITHDE F +
Sbjct: 1258 ALLRIMESRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|157863720|gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 316/1375 (22%), Positives = 607/1375 (44%), Gaps = 171/1375 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRDSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQQQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLA-------EIKSLKNRKESKLADINLLKERHDR 582
+ E+ +D +I L + +A +++ K+ E + + + H
Sbjct: 505 LIISQKRSEIYTLDHKIKALHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 583 AFHLLFDMIP--EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
F + P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRPPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLS 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
+ + K L + ++++++ +++ K +D +D E ++ S
Sbjct: 625 KPQKVLDAKRKHLNSKLQSISKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + GK+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-GKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ +++ E K+ R GV +D+V +
Sbjct: 790 QVKMDRDGVEILLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDKVQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKER 1081
Query: 1082 CVIKY----------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y H +++ + + Y+ ++ QLK +E+ DL +Y+
Sbjct: 1082 LLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQK 1183
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D +G R+Y+YRVV +
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSD--SGGAGTRSYSYRVVMQ 1199
Query: 1184 KNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RAY 1239
G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1200 NGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAAA 1258
Query: 1240 VVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ + K Q+NFQLI+ITHDE F +
Sbjct: 1259 LLRIMENRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|157863730|gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 318/1376 (23%), Positives = 606/1376 (44%), Gaps = 173/1376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKEFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRDSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQEQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKTLHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLS 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
L+ + K L + +++A++ +++ K +D +D E ++ S
Sbjct: 625 KLQKVLDAKRKHLNSKLQSIAKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + K+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-EKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ +++ E K+ R GV +D++ +
Sbjct: 790 QVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDEIQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKER 1081
Query: 1082 CVIKY----------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y H +++ + + Y+ ++ QLK +E+ DL +Y+
Sbjct: 1082 LLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQ 1182
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVM 1198
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RA 1238
+ G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1199 QNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAA 1257
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ K Q+NFQLI+ITHDE F +
Sbjct: 1258 ALLRIMESRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|157863718|gb|ABV90880.1| DNA repair protein Rad50 [Aegilops tauschii]
Length = 1316
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 316/1369 (23%), Positives = 601/1369 (43%), Gaps = 159/1369 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRDSITQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQQQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKALHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLA 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
L+ + K L + +++A++ +++ K +D +D E ++ S
Sbjct: 625 KLQKVLDAKRKHLNSKLQSIAKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLC 746
+ ++ + K+ +CP C R F D V K +T E+ ++
Sbjct: 679 RQMYEPF-EKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVPAENLSVAE 736
Query: 747 KQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEK 806
L L+ +Y+ +KL+ IP L +L + E + L + L K
Sbjct: 737 DLFNQLDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLAQVKMDRD 796
Query: 807 TALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKEKKNELNT 865
L + +D++++E+ L+ +++ E K+ R GV +D++ + + +T
Sbjct: 797 GVEVLLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDEIQLELISVQRARDT 855
Query: 866 FRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVY 925
+++ + + +E L + Q + + + ++L K E+
Sbjct: 856 LTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHFAEEKEQL 915
Query: 926 QTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEI 985
+ + L + P+ + E ALK+ ++ ++ + + + ++++ + + I
Sbjct: 916 ILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVLGTLNTRI 975
Query: 986 LNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLE 1038
Y + +L L+E +QK RK+DI + +++ Q + +Q
Sbjct: 976 KGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQLLRSQDQL 1028
Query: 1039 EIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLENCVIKY-- 1086
+ ++ +NL + K V +L +++L E + +DL ++ E + +Y
Sbjct: 1029 KRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKERLLSEYNR 1088
Query: 1087 --------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVI 1130
H +++ + + Y+ ++ QLK +E+ DL +Y+ L+ ++
Sbjct: 1089 CQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYYAALDKALM 1148
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQ 1189
++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV + G E
Sbjct: 1149 RFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVMQNGGAEL 1205
Query: 1190 DMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RAYVVRIVR 1245
+MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A ++RI+
Sbjct: 1206 EMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAAALLRIME 1264
Query: 1246 DHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
K Q+NFQLI+ITHDE F +
Sbjct: 1265 SRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|255947060|ref|XP_002564297.1| Pc22g02530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591314|emb|CAP97541.1| Pc22g02530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1294
Score = 260 bits (665), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 322/1353 (23%), Positives = 600/1353 (44%), Gaps = 187/1353 (13%)
Query: 9 IMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHD 68
+ G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 2 LTGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN---------- 51
Query: 69 PRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKD 128
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 52 -----------SKGGAFIHDPKLCGEKEVLAQVKLSFKATSGAKMVATRSLQLTVKKTTR 100
Query: 129 NCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLD 188
T + + + G + + E M +GVSKA+L++VIFCHQ+ S WP+
Sbjct: 101 QQKTLEGQLL--MVKNGERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWPMS 158
Query: 189 EGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLI 248
E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +AD ++
Sbjct: 159 EPSVLKKRFDEIFEAMKYTKAIDNIKALRKKQNEELGKFKIMEQHAKEDKDKADRAEKRS 218
Query: 249 YNNTQKRDQSFEELHNIEESMKPINEKLVQL-TEKERNMSVMSTQYQTKKTERDMIQESC 307
+ + EE + + M+ + E + T+ E V+ + K+ E IQ +
Sbjct: 219 VKLQDEIEALREETQKMSQEMRRVAELADKAWTQSESYAQVLGA-LEGKRIEAKSIQTTI 277
Query: 308 NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEE---KQSHTHI 364
+ L+ + +L D+ L+S L F+ ++ + +E K Y++ + +Q+ +
Sbjct: 278 DNLKRHLVELDESDEW-LESTLEQFET---KQLQYQQQEESHKENYMEIKERIEQTRHRL 333
Query: 365 NEAQMKLGKLERDEETHKKLNDTLKTKLNNLA---DTLCLDTTAKSQYTPEEGEGLIKMS 421
Q + GK E D+ ++ + ++ +N +A + LD T M
Sbjct: 334 GLKQAENGKFENDKANFERQSQRRQSMINEIARANNIRGLDET---------------MG 378
Query: 422 QTTIDKYLSDIKILERTFSDN------ENTK-----QAEINALIVEKVELESKIKSFKQQ 470
Q+ ID ++ IK L R + + E K Q +N + K L+ + K+Q
Sbjct: 379 QSEIDTFMQKIKRLLRDQNQSLDRVKREAQKELREVQETLNEIGQTKSALQETKNAAKRQ 438
Query: 471 IEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEID---QLSKSLDPDQLKNEIEA 527
I N K+ T ++NE+ + L++K+ + S ++ + +K+ DQ + A
Sbjct: 439 IAANDKEATTYQKKLNEIEVDEGFQAALESKVEDITSRLEHAKERAKTAPWDQDIQDTNA 498
Query: 528 WIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHL 586
IR+ LEDE ++ E+ + LA + LK + + + +K H DR +
Sbjct: 499 EIRR---LEDESSRLNTELIDSTKKAGELARLDHLKKESKDRERSLQTMKGAHGDRLKKV 555
Query: 587 LFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTL 646
+ E + +AL S + + + + + + L +E + + K L+ +++ L
Sbjct: 556 VGPDWKPETLERGFQQALDSESKQVADAERERDGVSRELEHVEFKLKTAKKNLKQRQKEL 615
Query: 647 AELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR-- 703
E + + + ++P E + E ++ Q +++ + QY Y+ K + R
Sbjct: 616 DECVKEIHEAVDAEP--SEYPEIVKE-RQAQYDLARKDADQYAGMGEYLTKCLDAAKRTK 672
Query: 704 -CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQE-------L 755
C C R F+++ + KL + KK +D + + L+E
Sbjct: 673 LCRTCQRSFKNEAELQTFTKKLDALV---------KKAGLDAEDETLKGLEEDLETARAA 723
Query: 756 KPVYENIMKLQDTDIP----------SLRSKLIELEENVIETKGELKKLKTALETPKTKE 805
Y+ ++L +T IP S R +L+E +ET+ K+ E+ + E
Sbjct: 724 SASYDTWVRLSETVIPELEQEEQECESQRDQLLE----KLETQD--GKVSEKTESKRDVE 777
Query: 806 KTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNT 865
A ++ + D I+ + + +EL ++ S R T D+ + +A EK EL
Sbjct: 778 GLAKTV-STIARYDAEIKTIKSQIQELSAKQQDASTAR-TLEDIQEEIASINEKSRELKK 835
Query: 866 FRSKIESGQTRLNSHNEKLQ-SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSV 924
SK+ + + + S KL+ + K+++ + + ++ A + +E E + +++
Sbjct: 836 TLSKVTNEKEKTRSEINKLELEFRDVKSNLDNAKFQLEKKADLTVRME----EFKKLNNQ 891
Query: 925 YQTELEELGRKVAPIETQLNLAQSELDALKK---EHKKKLNEEGAKIQDYTKQLEEVKRI 981
+ +E+ R + + +L AQ+ D + + E ++ L E +++ + QL+
Sbjct: 892 QREAIEKADRDIENLTPELLQAQARYDDISQRADERERDLQHEISRLSENIHQLDLAND- 950
Query: 982 KLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEID 1041
+I +Y +RG QL ++ +Q++ + A + R IN+I+ + + +
Sbjct: 951 --DINSYNQRGGPGQLERSKKELQEIEAEIGKLEADQSEITREINKISTQLKDSENTKRQ 1008
Query: 1042 LKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE--------NCVIKYHSQKMRS 1093
+NLT + ++ + EE++ E +++ + E N + + KM
Sbjct: 1009 YSDNLTYRQATRSLNTVVEEVEQLEAQNAEVDRGRFKQESERWTREHNALAAKQASKMGE 1068
Query: 1094 I----NRLIR--EYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQ 1135
+ ++L++ W Y +++ ++ + DL +Y L+ +++YH
Sbjct: 1069 MKSKDDQLMQLLADWNTDYKDAASKYKESHIKVETTKAAVEDLARYGGALDKAIMQYHGL 1128
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRC 1195
KM IN + E W + Y+G D+D I I +D ++ R+YNYRV K+G E DMR RC
Sbjct: 1129 KMAEINAIAGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKSGAEMDMRGRC 1187
Query: 1196 SAGQRVLACLIIRLFISD---------------------------------------QKN 1216
SAGQ+VLA +IIRL +++ Q N
Sbjct: 1188 SAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQAN 1247
Query: 1217 FQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
FQLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1248 FQLIVITHDEEFLRHMQCGDFSDYYYRVSRNER 1280
>gi|157863726|gb|ABV90884.1| DNA repair protein Rad50 [Aegilops tauschii]
Length = 1316
Score = 260 bits (665), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 317/1376 (23%), Positives = 605/1376 (43%), Gaps = 173/1376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K + ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASRMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRDSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQQQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--GRLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKALHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAGQQLKLAQMKIDAAKSHLA 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
L+ + K L + +++A++ +++ K +D +D E ++ S
Sbjct: 625 KLQKVLDAKRKHLNSKLQSIAKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + K+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-EKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ +++ E K+ R GV +D++ +
Sbjct: 790 QVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDEIQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAGVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKER 1081
Query: 1082 CVIKY----------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y H +++ + + Y+ ++ QLK +E+ DL +Y+
Sbjct: 1082 LLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLGRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQ 1182
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVM 1198
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RA 1238
+ G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1199 QNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAA 1257
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ K Q+NFQLI+ITHDE F +
Sbjct: 1258 ALLRIMESRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|400601812|gb|EJP69437.1| putative RAD50 protein [Beauveria bassiana ARSEF 2860]
Length = 1307
Score = 260 bits (665), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 332/1381 (24%), Positives = 629/1381 (45%), Gaps = 137/1381 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSRIEKLSISGVRSFSPTCREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKLQ N+ RSL
Sbjct: 59 -------------------SKGGAFIHDPKLCGEKEVMAQVKLQFRSINDRQHVATRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDCSL---VVVNNGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA+E++K+ R + +E+ +++ AH + +
Sbjct: 157 QDESLWPLSEPSALKKRFDEIFEALKYTKAIENLKVLRKKQVEELGKLQNDEAHNKVNKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ + + + + E+ I M+ +K+ Q E+ + + K
Sbjct: 217 RGERAEKRMTALQAEIEA---AREKCEAITAEMQDTQDKIRQKREQANSFLQVVQNLSNK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + + Q++ NEL I +L D A L+ +L ++ ++ + SE N+ ++ +QE
Sbjct: 274 REQLEYRQDAVNELRQRINEL-PEDDASLERQLTQYEESM-RRQSEEANRNKIHYSELQE 331
Query: 357 E-KQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
+ +S ++ + GK + D+E H++ LK ++ + + Y + +
Sbjct: 332 DLAKSRKSLSTKLAEQGKHQSDKEKHER---QLKMRMEMVQE--AAQRHGFRGYDDDLTD 386
Query: 416 GLIKMSQTTIDKYLSDIK-ILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
LIK I K ++ K LER +N AE++ ELE + K+ + Q +
Sbjct: 387 ALIKQFNDKIQKLFAEKKRDLERLQKEN----AAELDKASATISELEGQ-KAARTQDRLS 441
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRV-NSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K I + V Q++S+L + L V + ++ +L Q + E AW R
Sbjct: 442 AKQRMGAIEKRTTVLQNESSLINVDEGLKAVLDGQLGELESKFSQVQQEFETAAWDRHLT 501
Query: 534 ELEDELCVIDAEISILQAQNITLAEIKSLKNR---KESKLADINLLKERHDRAFHLLFDM 590
E +L +++E L + I + S + + ++ +L+D L + D
Sbjct: 502 EENTKLWQLESESDKLGRELIECTRLASERAQLDFRKKELSDRKLKLTTLTETWTPKLDK 561
Query: 591 IPEENFK-NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLR---DQKRTL 646
+ +K L+ ++ N+ ++ +++ +A V KT++ +QK+T
Sbjct: 562 LIGGGWKPEDLEGKFQTLLAAQNKSLQEARQQQEQTRQKQAKVDYKLKTIKETYEQKQTQ 621
Query: 647 A-----ELMDRMELVLGSKPFEDELDRVTL---ELKREQEEVSMMTSTQYLFNSYIGKLE 698
+++ ++ V S ED + V+ +++ ++++S++ + + + L+
Sbjct: 622 QNECKEQVLKALQSVRDSAVIEDYPEEVSATEQQIETLRDDLSLIDALKDYYTKCKRALD 681
Query: 699 ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHID---QLCKQQRSLQEL 755
+ C LC R F+ + + +++L+ KI ++ N KT ++ L + +LQ L
Sbjct: 682 AKKT-CLLCDRHFDDNQTAS--IDRLRAKI----DRHLNSKTKVEAEQDLSEASSTLQSL 734
Query: 756 KPV---YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQ 812
V Y+ +L + ++P LR++ +E + + L++ A+ + +++ +
Sbjct: 735 IAVRSQYDTYERLGN-ELPELRNERKSIETDYESIERLLEEHDAAVTAEEERQRDLDDMS 793
Query: 813 GDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIES 872
++ + Q +RE+ + ++ER S+ +G D++ Q ++ ++++
Sbjct: 794 KTVSNIGQTLREIQDSESQVERIASQQQSA-GSGRSADEIHELQGTVSEQMRASKNRVAK 852
Query: 873 GQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEEL 932
+++ +L+ +K+++ ++ + +G L ED + ++ + + E +
Sbjct: 853 LTNDRQRARDQISALELEKSELRNR---ISLTSGQLDKKEDLQGQIHNLKEELAHQREAI 909
Query: 933 GR---KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYT 989
R ++ +E ++ A+S D K ++K + E+K I+ +I +Y
Sbjct: 910 QRADQELEKVEPRITEARSIRDDTLKRGREKEQAITENRDSVATSINEIKMIESDIQDYE 969
Query: 990 KRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLL 1049
RG + LA+ + ++ L Q A+ + N++ Q I N + ++ +NL
Sbjct: 970 DRGGASNLASNQRAIAALEQTITTTEAEITELTQRTNKLKQDIDNGDRTKENINDNLNYR 1029
Query: 1050 EKKEAVAKLNEELKLSEIMISD-----LTKYHHTLEN----------CVIKYHSQKMRSI 1094
+ + L +E+ E + L LEN V+ K +
Sbjct: 1030 KHLRTLEVLRDEIDELENRNAHEDYERLQGEARALENQSNRLFAERGSVMGAMKTKDEDL 1089
Query: 1095 NRLIREYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
+RL++E W Y+ ++ ++ I DL + ++ V+++H+ KM +NR
Sbjct: 1090 DRLLKE-WEMDYKDAKQKYRESHIRVETTKAAIEDLAQCGSAVDKAVMQFHAMKMAEVNR 1148
Query: 1143 LIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVL 1202
+ E W YQG DID I I +D G+ RR YNYR+ K E DMR RCSAGQ+VL
Sbjct: 1149 IAGELWQSTYQGTDIDTILIRSD-NEGTTGRRNYNYRLCMVKQDAEMDMRGRCSAGQKVL 1207
Query: 1203 ACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFA 1262
A +I+RL +++ ++ DE T +DR + K+LAE+ + A
Sbjct: 1208 ASIIVRLALAESFGVNCGLVALDEP----TTNLDRDNI-------KSLAES------LHA 1250
Query: 1263 LDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDIHLRS 1321
+ I+ Q NFQLIVITHDEEF+ ++ D R+ RD K S I S
Sbjct: 1251 I--------IRARQAQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVKRDEKQNSVISRES 1302
Query: 1322 L 1322
+
Sbjct: 1303 I 1303
>gi|157863724|gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum]
Length = 1316
Score = 260 bits (664), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 318/1376 (23%), Positives = 606/1376 (44%), Gaps = 173/1376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRGSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQQQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLERGMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKALHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLS 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
L+ + K L + +++A++ +++ K +D +D E ++ S
Sbjct: 625 KLQKVLDAKRKHLNSKLQSIAKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + K+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-EKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ +++ E K+ R GV +D++ +
Sbjct: 790 QVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDEIQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKER 1081
Query: 1082 CVIKY----------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y H +++ + + Y+ ++ QLK +E+ DL +Y+
Sbjct: 1082 LLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQ 1182
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVM 1198
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RA 1238
+ G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1199 QNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAA 1257
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ K Q+NFQLI+ITHDE F +
Sbjct: 1258 ALLRIMESRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|301123681|ref|XP_002909567.1| DNA repair protein RAD50, putative [Phytophthora infestans T30-4]
gi|262100329|gb|EEY58381.1| DNA repair protein RAD50, putative [Phytophthora infestans T30-4]
Length = 1280
Score = 259 bits (663), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 344/1399 (24%), Positives = 607/1399 (43%), Gaps = 259/1399 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I GIR+F ++ ++ F PLT+++G+NGCGKTT+IEC+K A T P GA
Sbjct: 1 MSSIEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTGGLPPGAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG++ +H DP+I +E A ++L+ + + V R+
Sbjct: 61 SGQSLIH--------------------DPKIAGTNEVKASIRLRFRNQAGKVMLVHRTYQ 100
Query: 121 LSNKNGKDNCATRDTTIS-RKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
+ + D I V N C + + + +++GVSKAIL +VIFCH
Sbjct: 101 VRQTKKTISFKALDGVIQVANELGEKVSLNHKCGELDQ--HIPDMLGVSKAILESVIFCH 158
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRL------------------ 220
QE+S+WPL EG ++K+ FD IF++ +Y KALE+I K+++ RL
Sbjct: 159 QEDSNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARLDNAKDYKRDLDVLTAHMK 218
Query: 221 -----RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEK 275
R +I ++ Q +EAD K + D++ EL ++E +K + +
Sbjct: 219 TAEEIRDKIERMQERLQEVAEEGEEADGK-------IARADETLRELQQLQEEVKSFHLQ 271
Query: 276 LVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKIN 335
L ER ++T+ Q+ ++ + N++E ++ S ELQS LN +
Sbjct: 272 L------ERRQEDVATKEQSARS-------AYNKIE----KIMSDTDEELQSCLNNYDAT 314
Query: 336 LDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL-NN 394
++ S RL+ Q + +++ H NE + L R+E+T + N + K+ +
Sbjct: 315 IENHRSAFA---RLQEQKEKLQREQHK-TNEEYVAL----RNEKTRVETNIGMYQKMVAD 366
Query: 395 LADTLC-LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQA----E 449
L DT L T + P + Q I +L++ + + + + N A E
Sbjct: 367 LIDTASKLSTKYRFHLQP------LTSQQEDIWSFLAEFRSVVKDKQEEVNKLDAKQRQE 420
Query: 450 INALIVEKVELESK-------IKSFKQQIEGNKKDLTNVITQINEVN----QSQSTLQVL 498
+AL+ E EL S+ +KS Q +E +D V ++ + SQ + +
Sbjct: 421 DDALMTELSELTSQAKRLQDDLKSKTQSLEALNRDKQVVADRLRALGGAGLHSQRDAEEM 480
Query: 499 QTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAE 558
++++ + + LK+EI+ + RQ + + + + EIS L+ AE
Sbjct: 481 SSQVSEAEKTLADYRAKHNVAALKDEIQGFNRQMSGINGVVEDLGQEISQLRIYATRNAE 540
Query: 559 -----------IKSLKNRKESKLADINLLKERH----DRA-----FHLLFDMIPEENFKN 598
++S + + K+ADI + E DRA + D+I E K
Sbjct: 541 TEFQRSEYRKKLESFQANLQEKVADIEEIFEGGEKPTDRASLVSGIRYVDDLIGER--KR 598
Query: 599 SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRM----- 653
SLD R+ E+ + + L A ++ R L EL+DR+
Sbjct: 599 SLDTKRKEQASAEQRLIENTTSSKLAEKELNALRLKKNQLERQHVSGLKELLDRVIPGHD 658
Query: 654 ----ELVL--GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLC 707
EL + + + D D+V + LF + K + CPLC
Sbjct: 659 LKSAELGVREAERAYADAKDKV------------VRRKNMVLFLNIYKKKGLKDHCCPLC 706
Query: 708 TR--------FFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
R FES S K+ KIK+ + +K+ + L + L+E P +
Sbjct: 707 ERDMSPEEEQAFESVLSDKTDDGKVADKIKKAE---DLEKSSLQTLTE----LKEKMPSW 759
Query: 760 ENIMKLQDTDIPSLRSKLIELEENVIETKG---ELKKLKTALETPKTKEKTALSLQGDLT 816
++L+ T IP K+ ELEE K +++ K A E + A + D+
Sbjct: 760 RKWIELE-TAIPE---KVSELEEIYAAQKALEIDVQDKKAAFELAQEHFDAARVAKSDME 815
Query: 817 LLDQNIRELNTLQRELERQESKISGMR-STGVDLDQVLAQQKEKKNELNTFRSKIESGQT 875
+L ++ EL E+ ++E+++ G + ++G L V A++ K+ ++ +++ Q
Sbjct: 816 ILRKSADELEYSDVEITKKEARMRGSQGASGRSLADVEAEKDAKQAKVQELNHQLQRKQK 875
Query: 876 ---RLNSHNEKLQ----SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTE 928
R+N ++LQ S +++K + +++ L +++ L+ + +
Sbjct: 876 ELDRINEMLQQLQNDVHSRKEEKLRLETQRKEYDEAVKEQNRLREQEKALKEACAKLKKS 935
Query: 929 LEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY 988
E+GR V TQ + E + +L + + ++ + ++V+ +L+ L
Sbjct: 936 EPEVGRVVRAKATQRQTRRKEASEQLHVQRSELQQRQGDFRVFSDKCKQVQHGELDKLE- 994
Query: 989 TKRGTLTQLAALRESVQKLNQRKEDII-----------------AKRGVCERTIN----- 1026
Q+ AL +++ + QR++ + ++ V +R I
Sbjct: 995 ------RQVQALSDTIAQTKQREDTAVQALADLAPQMQSAQTNLSQNEVGKRQIQDNIDY 1048
Query: 1027 -EINQSIANQSLEEIDLKN---NLTLLEK-----KEAVAKLNEELKLSEIMISDLTKYHH 1077
E+ + + E DL+N NL L+ + A A L+ + +M+ +
Sbjct: 1049 RELQKQLEKMRTEVADLQNHIGNLPSLDDVNDRVESADAALSSAKHSASVMVGKRQQLLE 1108
Query: 1078 TLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKM 1137
L +K ++ + +Y ++ Q + +++ ++DL +Y L+ +++YHS+K+
Sbjct: 1109 ELREQKVKLRVPTLKDVEE---KYRHKLIQFETTQMAVTDLDRYFKALDESLLQYHSKKV 1165
Query: 1138 RSINRLIREYWTRIYQGNDIDYISIAADV--GTGSEKRRTYNYRVVQKKNGIEQDMRNRC 1195
IN +IR W Y+G DID I + + G S+ R+Y+YRVV KK G DMR RC
Sbjct: 1166 EEINTIIRSLWQITYKGQDIDTIELVSGQQDGAVSKAARSYDYRVVMKKAGAAIDMRGRC 1225
Query: 1196 SAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFS 1255
SAGQ+VLA L+IRL ALAETF
Sbjct: 1226 SAGQKVLAALVIRL---------------------------------------ALAETFC 1246
Query: 1256 RNCGIFALDEPTTNLDIKN 1274
NCGI ALDEPTTNLD +N
Sbjct: 1247 LNCGILALDEPTTNLDTEN 1265
>gi|157863728|gb|ABV90885.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 259 bits (663), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 317/1376 (23%), Positives = 607/1376 (44%), Gaps = 173/1376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSH 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRDSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQQQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKALHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLS 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
+ + K L + ++++++ +++ K +D +D E ++ S
Sbjct: 625 KPQKVLDAKRKHLNSKLQSISKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + GK+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-GKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ +++ E K+ R GV +D++ +
Sbjct: 790 QVKMDRDGVEILLRPVDTIDRHVQEIQELEPQVKDLEYKLDS-RGQGVKSVDKIQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQGKER 1081
Query: 1082 CVIKY----------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y H +++ + + Y+ ++ QLK +E+ DL +Y+
Sbjct: 1082 LLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQ 1182
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVM 1198
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RA 1238
+ G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1199 QNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAA 1257
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ + K Q+NFQLI+ITHDE F +
Sbjct: 1258 ALLRIMENRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|330919094|ref|XP_003298470.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1]
gi|311328291|gb|EFQ93424.1| hypothetical protein PTT_09208 [Pyrenophora teres f. teres 0-1]
Length = 1306
Score = 259 bits (661), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 326/1369 (23%), Positives = 600/1369 (43%), Gaps = 198/1369 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I G+R+F +K ++F PLTLIVG NG GKTTIIE +K+A T + P +
Sbjct: 1 MSKIDRMMIQGVRSFGPEKGETIQFTAPLTLIVGWNGSGKTTIIESLKYATTGDLPAQSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G F+HDP++ + E A VKL + + V R+L
Sbjct: 61 TGGAFIHDPKLRNEKELLAQ--------------------VKLSFRSTSGVRMVVTRNLQ 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
++ K + T + ++ + G + ++ E + +GVSKAIL+NVIFCHQ
Sbjct: 101 VTVKKNTKSQKTLEGSLL--MVKDGEKHSISTRVAELDQIIPQYLGVSKAILDNVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDR----LRKEIPEIKAHYQATL 235
E+S WPL + +K+ FDEIF+A KY KA+E+IK I++DR + +I E A T
Sbjct: 159 EDSLWPLSDASTLKKKFDEIFEAMKYTKAIENIKSIKKDRNIDLGQLKIIEANAKEDKT- 217
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERN-------MSV 288
KK D + +L F+E+ + E+ ++ K + +K +
Sbjct: 218 RAKKSEDRQAKL-----------FDEIEKLRETYTDLDAKCTEAQQKASDSYNHAARFEQ 266
Query: 289 MSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER 348
+ Q + K+ ++ +++ EL+ S+K+L D+ ELQS L+ ++ + +++
Sbjct: 267 IVAQLEAKRMTLNINKQNVAELQDSMKELGESDE-ELQSMLDQYEERVATYAAQVAE--- 322
Query: 349 LKSQYIQEEK---QSHTHINEAQMKLGKLERDEETHKK----LNDTLKTKLNNLADTLCL 401
LK +Y+ ++ ++ + Q ++GK E +E H++ +T+K A
Sbjct: 323 LKEEYLDFKQLLDKNRGALGAKQSEIGKYEAQKEQHERQMQQRENTIKEAAKRHA-IRGF 381
Query: 402 DTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELE 461
D + PE + L KMS+ D+ + + E T D + ++ +N L K L
Sbjct: 382 DYDITEKQVPEFQQILSKMSR---DQNRALERAREETQRDLRDAQEL-LNKLNTRKSGLS 437
Query: 462 SKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQL 521
++ + QI N K ++ + +N++ + + +LQ + + V + + + ++
Sbjct: 438 QSKEAARSQITTNDKRISELQRIMNQIKVDEGSEAILQERKHDVEKHLQSATAASASERY 497
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHD 581
+ I R LED + AE Q A I + + + +K+ H
Sbjct: 498 EERISEASRNLQTLEDRKERLTAEFGDASKQARESASIDVKREELGRQQHSLATMKKVHG 557
Query: 582 RAFHLLFDMIPE---ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKT 638
+ L D PE + + + LS + + + L + +S+S
Sbjct: 558 KRLSQLVD--PEWDPATLEATFQQVLSEKAGKVKEAASRRDIAQTKLDKVNFQLSSSESQ 615
Query: 639 LRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS---YIG 695
+ +++ L + E + +D++ L++ +EE +S + F++ Y+
Sbjct: 616 AKQKRKEL----QKYETKVKEAIQKDDVSDFEETLQQLEEEYEASSSDKAKFDAQIDYMT 671
Query: 696 KLEENEPR---CPLCTRFF----ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ 748
K E+ + C LCTR + D++ G + KLK I + + + + D++ +
Sbjct: 672 KCLESAEKHNICRLCTRSLHDDEDEDFTTAGFIKKLKDIIAKA--KNTMQADNADEIFAE 729
Query: 749 QRSLQELKPVYENIMKLQDTDIPSLRSKLIELE----------ENVIETKGELKKLKTAL 798
+ + KP YE +L+ ++P ++ + L E+ E +L+ K +
Sbjct: 730 LEAARNAKPSYELATRLRQNELPDIQKTITNLTSERDSLNKQLEDQDEVIHDLEAEKQEV 789
Query: 799 ETPKTKEKTALSLQGDLTLLDQNIREL------NTLQRELERQESKISGM----RSTGVD 848
E + ++ +S + L I+EL L R ++ +S +S + RS
Sbjct: 790 EALSKEVQSIVSYYNRVQELQVEIKELAQKQKSAGLSRGIDAIQSDLSQVSDDSRSARTT 849
Query: 849 LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGML 908
LDQ++A + + +N + + + L++ KL K+K
Sbjct: 850 LDQLIAARDKARNLITSLELSVRDINAELHNAQSKL----KEK----------------- 888
Query: 909 KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKK---EHKKKLNEEG 965
++L +R E + ++ + + L + + I ++ AQ + D + + + ++ ++E
Sbjct: 889 RALAERIEEFKRENNNQREAIRSLDQDMDNINPEIEQAQYKYDDINRRGNDRVQRTHDEA 948
Query: 966 AKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTI 1025
+K+ + +QLE+ EI Y RG QL ++ L I R I
Sbjct: 949 SKLSESLRQLEKANE---EINAYISRGGPRQLEQTHRDIENLQGEIARIETDMMNLTRKI 1005
Query: 1026 NEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHH--TLENCV 1083
++ ++ + + + NL + K ++ L E++ E ++ K H+ E+
Sbjct: 1006 KKLEDTMRDTDMSRRSITENLRYRKAKRSLESLRMEIEKLEAEGAERDKEHYEREAEHWD 1065
Query: 1084 IKYH--------------------SQKMRSINRLIRE----YWTRIYQLKLSEIMISDLT 1119
+KY ++ M N L ++ Y +++ ++ I DL
Sbjct: 1066 LKYRQLNIDKTGVERDMKNKDDQLTELMEEYNNLYKDSAQQYREAHIKVETTKAAIEDLG 1125
Query: 1120 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYR 1179
+Y L+ ++KYH+ KM INR++ E W YQG D+D I IA+D G G + R YNYR
Sbjct: 1126 RYAGALDKAIMKYHTLKMEEINRILAELWRNAYQGTDVDTIRIASD-GDG-KGNRVYNYR 1183
Query: 1180 VVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------------------------- 1213
VV K E DMR RCSAGQ+VLA ++IRL +++
Sbjct: 1184 VVMVKQDTEMDMRGRCSAGQKVLASIVIRLALAECFGTNCGLIALDEPTTNLDQQNIKGL 1243
Query: 1214 -------------QKNFQLIVITHDEEFIENLTAIDRAYVV-RIVRDHK 1248
Q NFQL+VITHDE+F+ + D V R+ RD K
Sbjct: 1244 AESLSQIIQTRRKQANFQLLVITHDEQFLREMNCADYTDVYWRVGRDVK 1292
>gi|159125506|gb|EDP50623.1| DNA repair protein Rad50 [Aspergillus fumigatus A1163]
Length = 1303
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 306/1351 (22%), Positives = 587/1351 (43%), Gaps = 189/1351 (13%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 VRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN------------- 47
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 48 --------SKGGAFIHDPKLCGEKEVLAQVKLSFKSTSGAKMVATRSLQLTVKK----TT 95
Query: 132 TRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSW 185
+ T+ ++ T + + L Q M +GVS+A+L++VIFCHQ+ S W
Sbjct: 96 RQQKTLEGQLLMVKDGERTAISSRVAELDQI----MPQYLGVSRAVLDSVIFCHQDESLW 151
Query: 186 PLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKK 245
P+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++AD +
Sbjct: 152 PMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAE 211
Query: 246 QLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQE 305
+ + + E H + + M+ + E + ++ + + + + K+ E +Q
Sbjct: 212 KRSIKLQDEIESLRAETHQLSQEMRRVAELADKAWKESESYAQILGTLEGKRIEAKSLQS 271
Query: 306 SCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK----QSH 361
+ + L+ + +L D+ LQS L F + K + + QE + + E K Q+
Sbjct: 272 TIDNLKRHLVELDDPDEW-LQSNLEQF----ESKQLQYQQQEEAQKENYMEIKDRIEQAR 326
Query: 362 THINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMS 421
+ Q + GK E D+ ++ + + +A + + Q
Sbjct: 327 QKLGVKQAEYGKYENDKANFERQVERRQRMTREIARSHNIRGFDNIQ------------D 374
Query: 422 QTTIDKYLSDIK--------ILERTFSDNENT---KQAEINALIVEKVELESKIKSFKQQ 470
Q+ ID ++ I+ LER + + Q+ +N + K L+ + K+Q
Sbjct: 375 QSDIDDFMRKIRKLLKEQNQALERVKREAQTELREVQSTLNEIGQRKSALQESKNAAKRQ 434
Query: 471 IEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
I N K+ +N ++NE++ + ++ + ++S ++ L EI+
Sbjct: 435 IGANDKEASNYQAKLNEIDVDEGVQAAVEANIEDISSRLNHAKDRARSASLDKEIQDMNS 494
Query: 531 QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR--AFHLLF 588
+ + LEDE ++AE+ + A + LK + + + +K H A ++
Sbjct: 495 ELHALEDEGARLNAELIEATKRAGDFARLDHLKKELKERERSLETMKAAHGERLAKYIGA 554
Query: 589 DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAE 648
+ P + + L T +++ + + + L +E N+ S KTL +++ L
Sbjct: 555 NWNPA-TLEQEFQRVLEEETRNVSNAESQRDGVNRELEQVEFNLKTSKKTLAQRQKELNS 613
Query: 649 LMDRMELVLGSKP--FEDELDR--VTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRC 704
+ + +P + D L + L++ R E S ++ K C
Sbjct: 614 CATEIREAINEEPEEYPDALKQRQAQLDVARRDAEQSAGLGDYFMRCLETAK---QVKAC 670
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
LC R F +D +L+ +K+ Q ++ +++ + + + + Y+ +
Sbjct: 671 RLCQRAFRADAEFTVFQKRLEGLVKKA--QIGVEEEDVERFEAELDAARAVSTAYDTWTR 728
Query: 765 LQDTDIPSL----------RSKLIELEEN-------VIETKGELKKLKTALETPKTKEKT 807
L T+IP L R +L+ EN IE K +++ L + T E
Sbjct: 729 LSKTEIPDLEKEEDQYALQRDELLNQLENHDKIVSEKIEKKRDVEALSKTVNTIVRYESE 788
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGM----RSTGVDLDQVLAQQKEKKNEL 863
+++ + L N ++ NT R LE + +I+G+ R+ L +++ +++ + E+
Sbjct: 789 IRTIRSQIQDLSSNQQD-NTATRTLEDIQEEIAGIGDKTRALKKTLSKLINDREQARTEM 847
Query: 864 NTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDS 923
N ++ +++L+ N K Q ++ + +L +E E + ++
Sbjct: 848 NNLELQLRDARSKLD--NVKFQ---------------LERKSDLLARIE----EYKNFNN 886
Query: 924 VYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKL 983
+ + + R + + +L Q++ D + + + + E I ++++ ++
Sbjct: 887 QQREAITKADRDIEELTPELLKYQAQYDDISQRVEAREREMQQGISQLSERIRQLDLATE 946
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLK 1043
EI +Y +RG +QL R +Q + + A++ + IN+I+ + + +
Sbjct: 947 EIDSYNERGGPSQLERSRRELQTIEAEISQLEAEQANITKEINKISAQLKDSENTKRQYS 1006
Query: 1044 NNLTLLEKKEAVAKLNEELK--LSEIMISDLTKYHHTLE------NCVIKYHSQKMRSI- 1094
+NLT + A+A+++ E++ ++ D +++ E N + + KM +
Sbjct: 1007 DNLTYRQATRALAEVSAEIENLAAQNAEVDRSRFKEESERRTREHNALAAKQASKMGEMK 1066
Query: 1095 ---NRLIR--EYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKM 1137
++L++ W Y+ ++ ++ + DL +Y L+ ++KYHS KM
Sbjct: 1067 SKDDQLMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKM 1126
Query: 1138 RSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSA 1197
IN +I E W + Y+G D+D I I +D ++ R+YNYRV K+G E DMR RCSA
Sbjct: 1127 EEINAIIGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKSGAEMDMRGRCSA 1185
Query: 1198 GQRVLACLIIRLFISD---------------------------------------QKNFQ 1218
GQ+VLA +IIRL +++ Q NFQ
Sbjct: 1186 GQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQANFQ 1245
Query: 1219 LIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
LIVITHDEEF+ ++ D + Y R+ R+ K
Sbjct: 1246 LIVITHDEEFLRHMQCGDFSDYYYRVSRNEK 1276
>gi|121708404|ref|XP_001272120.1| DNA repair protein Rad50 [Aspergillus clavatus NRRL 1]
gi|119400268|gb|EAW10694.1| DNA repair protein Rad50 [Aspergillus clavatus NRRL 1]
Length = 1382
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 303/1340 (22%), Positives = 578/1340 (43%), Gaps = 157/1340 (11%)
Query: 7 LHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFV 66
L +R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 3 LPPTSVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-------- 54
Query: 67 HDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNG 126
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 55 -------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSTSGAKMVATRSLQLTVKKT 101
Query: 127 KDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWP 186
T + + + G + + E M +GVSKA+L++VIFCHQ+ S WP
Sbjct: 102 TRQQKTLEGQLL--MIKDGERTAISSRVAELDQIMPQYLGVSKAVLDSVIFCHQDESLWP 159
Query: 187 LDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQ 246
+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++AD ++
Sbjct: 160 MSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEK 219
Query: 247 LIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQES 306
+ + E H + + M+ + E + ++ + + + + K+ E +Q +
Sbjct: 220 RSIKLQDEIEALRVETHQLSQEMRRVAELADKAWKESESYAQVLGSLEGKRIEAKSLQST 279
Query: 307 CNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK----QSHT 362
+ L+ + +L D+ LQS L F + + + + QE + + E K Q+
Sbjct: 280 IDNLKRHLVELDDPDEW-LQSNLEQF----ESRQLQYQQQEEAQKENYMEIKDRIEQTRQ 334
Query: 363 HINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQ 422
+ Q + GK E D+ ++ + + +A + + Q Q
Sbjct: 335 RLGVKQAEYGKYENDKANFERQVERRQRMTREIARSHNIRGFDSIQ------------DQ 382
Query: 423 TTIDKYLSDIKIL-----------ERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
ID ++ I+ L +R Q+ +N + K L+ + K+QI
Sbjct: 383 ADIDDFMRKIRKLLKEQNQALDRVKREAQTELREVQSTLNEIGQRKSALQESKNAAKRQI 442
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
N ++ N ++NE++ + L+ + ++S + + EI+ +
Sbjct: 443 ASNDREAANYQGKLNEIDVDEGVQAALEANIEDISSRLTEAKDRARSASWDKEIQDLNLE 502
Query: 532 RNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDM 590
LEDE ++AE+ + A + LK + + + +K H +R +
Sbjct: 503 IQNLEDESSRLNAELIEATKRAGDFARLDHLKRELKERERSLETMKGAHGERLAKFVGSN 562
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
+ + + L + D+++ + + + L +E + + KTL +++ L+
Sbjct: 563 WNPASLEQDFQRVLEEQSRDLSKAESQRDGVSRELEQVEFKLKTAKKTLTQRQKELSSCA 622
Query: 651 DRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR---CPL 706
+ + P +E V L ++ Q +V+ + Q Y+ + E + C L
Sbjct: 623 KEIREAINEDP--EEYPEV-LRQRQAQLDVARRDAEQTAGIGDYMMRCLETARQAKVCRL 679
Query: 707 CTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQ 766
C+R F+ D +L+ +K+ Q N ++ +++ + + + Y+ +L
Sbjct: 680 CSRTFKDDAEFTVFRKRLEGLVKKA--QLNVEEEGVERFESELDTARAASTSYDTWTRLS 737
Query: 767 DTDIPSL----------RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLT 816
T+IP L R +L++ EN + GE + K +E T ++
Sbjct: 738 KTEIPDLEKEEDQYVLQRDELLDQLENHDKIVGEKAEKKREVEALSKTVNTIARYDSEIK 797
Query: 817 LLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESG--Q 874
+ I++L+ Q++ + T D+ + +A EK L +K+ + Q
Sbjct: 798 TIRSQIQDLSAKQKD--------TAAARTLEDIQEEIAGIGEKSRTLKKSLAKLSNDREQ 849
Query: 875 TRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGR 934
R +N +LQ L+ ++ + + + ++ A +L +E E + +++ + +E+ R
Sbjct: 850 ARTEMNNLELQ-LRDARSKLDNTKFQLERKADLLSRIE----EYKNLNNQQREAIEKADR 904
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTL 994
+ + +L Q++ D + + + + E I ++ + ++ EI +Y +RG
Sbjct: 905 DIEELTPELLKYQAQYDDITQRVEGRERELQQGINQLSENIRQLDVATEEIDSYNERGGP 964
Query: 995 TQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEA 1054
+QL R +Q + + A++G + IN+I+ + + + +NLT +
Sbjct: 965 SQLERSRRELQTIENEISQLEAEQGNITKEINKISAQLKDSENTKRQYSDNLTYRQATRT 1024
Query: 1055 VAKLNEELKLSEIMISDLTKYHHTLE--------NCVIKYHSQKMRSI----NRLIR--E 1100
+A+++ E++ +D+ + E N + + KM + ++L++
Sbjct: 1025 LAEVSAEVEQLAAQNADVDRSRFKDESERRTREHNALAAKQASKMGEMKSKDDQLMQLLA 1084
Query: 1101 YWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
W Y+ ++ ++ + DL +Y L+ ++KYHS KM IN +I E W
Sbjct: 1085 DWNTDYKDATSKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKMEEINAIIGELW 1144
Query: 1149 TRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
+ Y+G D+D I I +D ++ R+YNYRV K G E DMR RCSAGQ+VLA +IIR
Sbjct: 1145 QKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIR 1203
Query: 1209 LFISD---------------------------------------QKNFQLIVITHDEEFI 1229
L +++ Q NFQLIVITHDEEF+
Sbjct: 1204 LALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFL 1263
Query: 1230 ENLTAIDRA-YVVRIVRDHK 1248
++ D + Y R+ R+ K
Sbjct: 1264 RHMQCGDFSDYYYRVSRNEK 1283
>gi|390346716|ref|XP_786771.3| PREDICTED: DNA repair protein RAD50-like [Strongylocentrotus
purpuratus]
Length = 900
Score = 258 bits (659), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 224/847 (26%), Positives = 401/847 (47%), Gaps = 73/847 (8%)
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPD 519
LE+ IK I N L + +++ + +S L+ L+ + SE+ QL SL+ D
Sbjct: 25 LETTIKMKMATINDNTSKLREIKGELSTMGESSQRLKELENEKKTAESELTQLEGSLNVD 84
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLK-E 578
+K EI++ R+ + + + + E++ + +Q+ A+++ ++ K K I L+ +
Sbjct: 85 DIKQEIDSLQREAKQYDKRMSQLTNELTTISSQSQARAKLEMMQKEKTIKENQIRSLRGK 144
Query: 579 RHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKT 638
R + HLL P EN + L L T ++ R + L +AN
Sbjct: 145 REEEMLHLL-GHFPSENIRTKLSNYLVEKTEEVKRCNNKLQHARMDLSAKQANKKTIMDQ 203
Query: 639 LRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLE 698
L+ ++ L D++ GS+ ++ + ++T + Q E +T +++LF+ YI L+
Sbjct: 204 LKKKEDELRSNTDQLMSACGSEDIDESIQQITQSINSLQNERGALTGSKHLFDRYIQSLQ 263
Query: 699 ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV 758
+ CPLC R F+S V LV +L+ K++ P + K+ I + ++ L L+P+
Sbjct: 264 RTDALCPLCHRGFDSGAEVQELVQELQDKLRLAPSKLAEKERTITKQREKSDRLLVLRPI 323
Query: 759 YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLL 818
+ KL + +IP L+ KL + ++ + + + + + + E A ++ D+ +L
Sbjct: 324 KDAAKKLSEREIPDLKLKLSAVNADIEKLNATVMEAEDNVSMLQVDEAMARDMKPDIQIL 383
Query: 819 DQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLN 878
++ + EL L+R++ Q SG L QV + E K +LNT RS +E Q +
Sbjct: 384 EKTLTELRDLERKIGEQSKYFSG-SDISRTLQQVNTETAEVKIKLNTVRSTLELKQRQRQ 442
Query: 879 SHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAP 938
H + + ++ N I S+ L + + LE + EL +Q E+E+ ++ P
Sbjct: 443 EHVDNVNMMRISINSITSETLRLSAKLQKREKLESEQAELSTNTRTFQREIEDSRQEQRP 502
Query: 939 IETQLN-LAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
I+ +L LAQ ++ A+ ++ + ++ E KI + +QL +++ I Y G +L
Sbjct: 503 IKDKLQKLAQDKV-AITQKKESEIKEIREKIDEVQQQLRDIRAGTSNIAKYVTDGKEAKL 561
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL------LEK 1051
+ + LN+R + + TI ++ I+NQ ++E++L NN+ L +EK
Sbjct: 562 DDVEVKIMDLNERLTKLGEDLSLMTATIEQLKDDISNQKVKEMELGNNMRLKKYQQEVEK 621
Query: 1052 KEA-VAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR------ 1104
K + KL E+L ++ + K + + ++ + +R+ TR
Sbjct: 622 KSGEIEKLQEKLGGYNLITIEREKTEMEKKKVALNREKNQLDGRSTELRKEVTRQERELE 681
Query: 1105 --------------IYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+ + + +EI DL KY++ L + + YHSQKM IN+++R+ W
Sbjct: 682 SDSYKNAEKNYNDMMIKCRTTEIANKDLDKYYNALNSAINTYHSQKMSEINKIVRDLWRM 741
Query: 1151 IYQGNDIDYISIAADVGTGSE--KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
Y+G+DID+I I AD TG+ +RR YNYRVV K DMR RCSAGQ+VLA L+IR
Sbjct: 742 TYKGSDIDFIEICADDETGASTTQRRQYNYRVVMVKGDTALDMRGRCSAGQKVLASLLIR 801
Query: 1209 LFISD---------------------------------------QKNFQLIVITHDEEFI 1229
L +++ Q+NFQL++ITHDEEF+
Sbjct: 802 LALAETFCLSCGILALDEPTTNLDRDNIESLAHALVDILKSRENQRNFQLLIITHDEEFV 861
Query: 1230 ENLTAID 1236
E L D
Sbjct: 862 ELLGHSD 868
>gi|302309004|ref|NP_986184.2| AFR637Wp [Ashbya gossypii ATCC 10895]
gi|299790898|gb|AAS54008.2| AFR637Wp [Ashbya gossypii ATCC 10895]
gi|374109416|gb|AEY98322.1| FAFR637Wp [Ashbya gossypii FDAG1]
Length = 1296
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 342/1373 (24%), Positives = 612/1373 (44%), Gaps = 241/1373 (17%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + L I GIR+F A V++F +PLTLIVG NGCGKTTIIEC+K+A T + P +
Sbjct: 1 MSAIHNLSIQGIRSFDARDKEVIKFGKPLTLIVGANGCGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G F+HDP+I + + A VKL T N + V R++
Sbjct: 61 NGA---------------------FIHDPKINGEVDVRAQVKLAFTNANGVQMIVTRNIQ 99
Query: 121 LSNKNGKDNCATRD---TTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
L K T + I+R T + QQ + +GV KAIL VIF
Sbjct: 100 LMKKRTTTTFKTLEGQLVAINRGERTTLSTRAADLDQQVPIY-----LGVPKAILEYVIF 154
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLN 236
CHQE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ +
Sbjct: 155 CHQEDSLWPLSEPANLKKRFDEIFQAMKFTKALDNLK----GIKKDMAIDIKLLKQSVEH 210
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEEL-HNIEE---SMKPINEKLVQLTEKERNMSVMSTQ 292
K + D + + KR S EL H +++ ++ I +L ++TE+ + + Q
Sbjct: 211 LKIDRDRSRAI------KR--SISELEHKVKDYQSTVPEIERQLKEITEQSDKLFYSNQQ 262
Query: 293 YQTKKTE-------RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELEN 345
+Q ++ RD I L+ SI+ L D+ +L L F +L EK E N
Sbjct: 263 FQQVLSKIDSLGHSRDSIGNQIQRLQDSIEPL-DMDREKLVDLLENFSSSLAEK-EEAIN 320
Query: 346 QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTA 405
+ +++ +E QS+ E+ + + + ++ + N L T+L N + ++T
Sbjct: 321 RMEIEAAAADDELQSNKATYESLLSESAVLKSKQKEYEKNRDLLTELTNQLASEGINT-- 378
Query: 406 KSQYTPEEGEGLIKMSQTTIDKYLSDIKIL-ERTFSDNENTKQAEINALIVEKVELESKI 464
E+ G I+ + +SD+++ ++ ++ + + N LI E E K+
Sbjct: 379 ------EDSLGCIESMIQKAETKISDLRLKHQKELNEAQERLSGKQNELIRE----EQKL 428
Query: 465 KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNE 524
K L + ++ +++++S L++ + L + ++ K D+ E
Sbjct: 429 SYTKDDRAKLNDQLMTLKQKLARISETESELEISKQDLEKYKPRVEMWQKENAVDRFNEE 488
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADI-----NLLKER 579
I++ + LE+++ + +IS + LA+ LK SK + +
Sbjct: 489 IKSKNDEMLLLENDVEKVQIQISNANQHSELLAKYSLLKTSVVSKKQQLEEAISKFKADE 548
Query: 580 HDRAFHLLFDMIPEENFKN---SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSS 636
H + + D E FK S+ K L+ + + + I+E + KE +E+++
Sbjct: 549 HSKFLGIEIDDDFELEFKKKYISIQKQLAQASRNASEIKETYSEKEFTAKNIESDLVGV- 607
Query: 637 KTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEE---VSM----MTSTQYL 689
K ++E +++++ + +E + EL +E EE V++ M T
Sbjct: 608 ------KTAISECKEKLQMAMPEDCTIEEYE----ELVQESEESYKVALENLKMHRTTLE 657
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ 749
FN ++ E C LC R F+ D L+ +LK++ T +KT D L ++
Sbjct: 658 FNQKALEIAETTNCCYLCRRNFDKDSERSKLIEELKSRT-----NTAFEKTLEDTLNDEK 712
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTK----E 805
+ L L+ + ++I+ L+ SL+ + + E+++ E K +L K K E + +
Sbjct: 713 QYLASLRALEKDIVNLR-----SLKMRAVTQEKHLQEAKLQLGKNKAQHEDAQRQYSKLR 767
Query: 806 KTALSLQGDLTLLDQNI----RELNTLQRELER--QESKISGMRSTGV------------ 847
+T + L L +I +EL ++ E R E KI G S GV
Sbjct: 768 ETQEHFEQRLRPLFHDIIRLQKELAQVEGEYGRLSDEVKIYGGSSEGVYTVEELQRKQTN 827
Query: 848 ----------DLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSK 897
++ ++ +++ K E N + + ++ ++LQ Q+ + D
Sbjct: 828 INERLRVLRKEVGRLQEEKERKATEFNNLVALVREKTFKVTEMEKQLQEKQQIQKDAVGI 887
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEH 957
+L++ G+L +D+ +T LE L +V+ ++T L ++E +
Sbjct: 888 ELSIGNMDGIL------------LDA--ETVLERLAAEVSTLKTTLASIRNEQSEKDSQE 933
Query: 958 KKKLNEEGAK------IQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRK 1011
++LN K + D K+ ++V ++KR L + AL + + Q
Sbjct: 934 ARQLNGLKTKYMQLKGVIDSMKEFDDV---------HSKR--LVDVTAL---LTRSQQDS 979
Query: 1012 EDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISD 1071
E++ + + I + NQ + + + E+ ++K NL L++ K + +++EEL + ++
Sbjct: 980 EELTKRINTLGKRIAKENQKLKDSTNEQKNMKLNLDLIDLKSQMKEISEELVRLDARSAE 1039
Query: 1072 LTKYHHTLENCVIKYHSQKMRS-------------------INRLIREY----------W 1102
+ + E+ ++ +K+ S N+L EY W
Sbjct: 1040 AQRDKYQQESMKLRTEFEKLSSENAGKLGEIKQLQNQIALLTNQLQSEYRDVDDRYQQEW 1099
Query: 1103 TRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI 1162
+ L+ ++ D+ Y L++ ++KYH KM INR+I E W R Y G D+D I I
Sbjct: 1100 AK---LQTKTLVTDDIDTYSKVLDSAIMKYHGLKMEDINRIIDELWKRTYSGTDVDSIKI 1156
Query: 1163 AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------- 1213
+D + + ++YNYRVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1157 KSDEVNSTTRGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGTNCGVI 1216
Query: 1214 ------------------------------QKNFQLIVITHDEEFIENLTAID 1236
QKNFQLIVITHDE+F++++ A++
Sbjct: 1217 ALDEPTTNLDEENISSLARSLSNIIKFRRHQKNFQLIVITHDEKFLDHMNAVN 1269
>gi|225558965|gb|EEH07248.1| DNA repair protein rad50 [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 257 bits (656), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 320/1362 (23%), Positives = 597/1362 (43%), Gaps = 195/1362 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 157 IDKLSILGVRSFDNSRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN----- 211
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
S G F+HDP++ + E A VKL + + RSL L+
Sbjct: 212 ----------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSVSGARMVATRSLQLTV 255
Query: 124 KNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENS 183
K T + + + G + ++ E M +GVSKAIL++VIFCHQ+ S
Sbjct: 256 KKTTRQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDES 313
Query: 184 SWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADS 243
WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +AD
Sbjct: 314 LWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADR 373
Query: 244 KKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMI 303
++ + + E H + + M+ E + ++ + + + + K+ E I
Sbjct: 374 AEKRSIKLQDEIEALRAESHELSQQMRRAAELADKAWKESESYAQILGTLEGKRIEAKSI 433
Query: 304 QESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ---- 359
Q S L+ + ++ D+ L+ L F+ ++ E + LK +Y+ E KQ
Sbjct: 434 QSSITNLQEHLVEVDESDEW-LERTLEQFE---SQQTQYREQEVSLKEKYV-ELKQVIED 488
Query: 360 SHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG--EGL 417
+ T + Q + GK E D K+Q+ + G E L
Sbjct: 489 NRTRLGLKQAEYGKHEND----------------------------KAQFERQLGRREKL 520
Query: 418 IK--MSQTTI---DKYLSDIKILE-----RTFSDNENT---------------KQAEINA 452
IK Q I D L D+++ E R S ++N Q+ +N
Sbjct: 521 IKEIARQNNIRGFDDDLDDMQVNEFMQRIRKLSKDQNQALERARQEAQMELREAQSLLNQ 580
Query: 453 LIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL 512
L K L+ + ++QI N + + +++ ++ + + VL++++ +++
Sbjct: 581 LSQRKSALQEVKNAARKQISSNDIEADSYQRRLDGIDIDEGSKAVLESRIEETERSLNEA 640
Query: 513 SKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLAD 572
+ + I++ + LEDE ++AE+ + LA + K + +
Sbjct: 641 KEKAKAASWDSTIQSKTAEIRLLEDESSKLNAELIEGTKRAGDLARLDHFKKELKDRERS 700
Query: 573 INLLKERH-DRAFHLLFDMIPEENFKNSLD----KALSSITFDINRIQEDINAKEKHLYT 627
+ ++ H DR L PE N ++LD +AL T + R++ D + + L
Sbjct: 701 LETMEGAHSDRIKKFL---TPEWN-PSTLDQEYQRALQEATNALTRVERDRDGVSRQLEH 756
Query: 628 LEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTS 685
E + + K L ++ L + + ++ + +P E D L + ++L +++ +
Sbjct: 757 AEFKLKTTRKDLLQRRNELKQCIQKIRDAVDDEPAEYPDILKQRQVQL-----DMAKKDA 811
Query: 686 TQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTH 741
QY Y+ K + + C +C+R F+++ +NKL +K + ++
Sbjct: 812 DQYAGLGEYLSKCMDAARQKKVCRMCSRPFKTEGEFQNFLNKLDALVKRATQDAIDE--S 869
Query: 742 IDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELE---ENVI-ETKGELKKLKTA 797
+ QL + + Q + Y+ ++L T+IP+L + +LE E+++ + + K +
Sbjct: 870 MQQLEEDLEAAQSVSTFYDTWVRLSSTEIPALEKEESQLESQREDLLSQVEDHDKIVSER 929
Query: 798 LETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQK 857
+E+ K E + ++ ++ D I+ L + + L + + G R T D+ + ++
Sbjct: 930 VESKKNVESLSKTV-ATISKYDSEIKTLRSQIQNLLANQQDVGGTR-TLEDIQEQISAIG 987
Query: 858 EKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRK 915
E+ E SK+ E Q+R ++ +L+ + D+ S SL R
Sbjct: 988 ERSREFQKVISKLNNEKDQSRT-----EITALELKLRDVRSNLDNANYQLEKKASLAARV 1042
Query: 916 CELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKE---HKKKLNEEGAKIQDYT 972
E +++ + +E+ + + + +++ AQ+ D + +++L +E +++ D
Sbjct: 1043 EEYRNLNAKQREAIEQADQDIESLAPEVSKAQALYDDISSRAGARERELQQEASQLSDSL 1102
Query: 973 KQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSI 1032
QL E+++Y RG LA + V+ + + ++G + IN I+ +
Sbjct: 1103 HQLSLTNE---EVMSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKDINAISARL 1159
Query: 1033 ANQSLEEIDLKNNLTLLEKKEAVAKLN---EEL-----KLSEIMISDLTKYHHTLENCVI 1084
+ + +NL + A+ +N EEL ++ + ++ N +
Sbjct: 1160 KDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESERRTREHNALS 1219
Query: 1085 KYHSQKMRSI----NRLIR--EYWTRIY------------QLKLSEIMISDLTKYHHTLE 1126
+ KM + ++L++ W Y +++ ++ + DL +Y L+
Sbjct: 1220 ARQASKMGEMKSKDDQLMQLLADWNTDYKDAAVKFKEAHIKVETTKAAVDDLGRYGSALD 1279
Query: 1127 NCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNG 1186
++KYHS KM INR+I E W + Y+G D+D I I +D ++ R+YNYRV K
Sbjct: 1280 KAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQD 1338
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISD--------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1339 AEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDI 1398
Query: 1214 ------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1399 IKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNER 1440
>gi|134118852|ref|XP_771929.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254533|gb|EAL17282.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1329
Score = 256 bits (655), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 348/1411 (24%), Positives = 616/1411 (43%), Gaps = 262/1411 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L I GIR+F +V+ F PLT+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTTIIECLKYATTGDMPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
G FVHDP++ + E A V+L+ + + R+L
Sbjct: 61 GGA---------------------FVHDPKMAGEKEVKAQVRLRFWNAKRERMTATRNLQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIF--ATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
+ + K G+ T + +++ ++G + + E E+ L+GVS+AIL NVIF
Sbjct: 100 VTTKKTGQLTMKTLEGILAKTDVGDSSGKRNTISTKCSEMDEEVPYLLGVSRAILENVIF 159
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKE-IPEIKAHYQATLN 236
CHQE S+WPL E +K+ FD+IF+ATKY KAL++IK LRKE + E+K +
Sbjct: 160 CHQEESNWPLSEPAALKKKFDDIFEATKYTKALDNIKT----LRKERMAELKVDKERLKF 215
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEK---LVQLTEKERNMSVMSTQY 293
K + D ++L ++D +EES+ N K L L E+ + + + ++
Sbjct: 216 LKADKDKAERL------RKD--------LEESISQENRKQTELDNLKERYETIKIRNAEF 261
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
+ T I E L+ K+++ ++ SKLN+ + +DE EL
Sbjct: 262 YEEATHFRQIYEQSKSLKEK-KKMYEDNRK--HSKLNMQE--MDESTEEL---------- 306
Query: 354 IQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLAD---------------- 397
+ ++ H+ M+ + E +E + + L+ K NLA+
Sbjct: 307 LHMQQNFDAHLRTLTMQRSEKEDAKEKEESELEDLRVKERNLANRQGGLVAHRQTYERNL 366
Query: 398 ---TLCLDTTAKSQ------YTPEEGEGLIKMSQT---TIDKYLSDIKILERTFSDNENT 445
+ AK+ Y+P E + + + K +D+K L+ S E
Sbjct: 367 REREAAIRQIAKAHDLVGYDYSPLEDSKVAEFVDKIYEMVRKAENDLKKLQTENSRKERE 426
Query: 446 KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV 505
Q E++ L K ++ KS ++QI + + + ++ L++ Q KL +
Sbjct: 427 LQEELDRLSTMKTSAQATKKSKEEQIIRLTEKIRTSEATFHSISNPSVELELNQNKLTEL 486
Query: 506 NSEIDQLSKSLDP---DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSL 562
+++ + + D+ N+ IRQ+ ELE + I AE+++L + + A++
Sbjct: 487 EADLSKFQAEITDAKYDEKINQKGLLIRQK-ELERD--NISAELAVLNRKADSRAKLDLQ 543
Query: 563 KNRKESKLADINLLKERHDRAFHLLF-------------------------DMIPEENFK 597
+N E K + I+ L + H+ F L D+I EEN
Sbjct: 544 RNELEGKNSQISTLLKTHEAKFRELVEVDIHDVKPEDIEDKVIGAISRKDRDLIQEENNA 603
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTL----EANVSNSSKTLRDQK------RTLA 647
++L++ S + ++R +E++ K++ ++ + EA + N ++ +++ + LA
Sbjct: 604 SALNRDHSQVQASLSRAREELAIKKREIHNMQREIEAAIYNVNQPAEEEEVPAEEAKNLA 663
Query: 648 ELMD--RMELVLGSKPFED-ELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRC 704
E D R E+ + D + RV E ++T+ + G + C
Sbjct: 664 EAFDICRSEIESVQRAIMDKQGSRVVWE--------GLLTTVK------AGGV------C 703
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQEL-------KP 757
C R + + + ++ KI+++ E ++ +D + ++S E+ +P
Sbjct: 704 EACNRGIKHEEK-NAVTRHMEAKIRQLMEA---EQAGVDAEIEVEKSWTEILDTLIRVEP 759
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTL 817
I LQ IP L +++ E EE + E+ + KT+++ K+ + +L+ +
Sbjct: 760 HEAKIQDLQRRVIPRLETQIKEGEEKLRSLVKEVDESKTSIQKLKSASRDLQNLKATASY 819
Query: 818 LDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRL 877
+++ E L+ ++R ++++ S+ +++V + E+ T + Q
Sbjct: 820 INRLYIETGDLKANVKRLQTELESSGSSKT-VEEVQKEVDRVSQEIKTLSRE----QQAF 874
Query: 878 NSHNE-KLQSLQKQKNDIHSKQLTVQGGAGMLKSLED-RKCELEGMDSVYQT------EL 929
+S E K+ +L+ +++I K L + G LK+ +D RK E E + + T EL
Sbjct: 875 SSEKELKVNALRATQDEIGRKSLHI----GRLKAQQDKRKMEEEALSDMQNTLGTLHDEL 930
Query: 930 EELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYT 989
+L + V E L + E E +++ Y L E++ Y
Sbjct: 931 RDLDQTVQAAEAPWKEKNETLGRFRTERANAEKEASTQVRMYQSSLGEIEGKHKACQAYV 990
Query: 990 KRGTLTQL----AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN 1045
G ++ AA+ E ++++Q + R E I+ ++ ++ + ++++N
Sbjct: 991 AEGNDRKIRENEAAMSEIKRQISQSND----ARAALEAEISALSSELSKSESLKANIRSN 1046
Query: 1046 LTLLE-------------------KKEAVAKLNEELKLSEIMISDLTKYHHTLENCV--- 1083
L E E+ AK N+E K M+ + T+ +
Sbjct: 1047 LKYREDGKKIEMVQAELDELDLDSAAESRAKFNKEYKG---MLDEETEAQGLMAITQGGL 1103
Query: 1084 --IKYHSQKMRSI-----NRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
++ + QKM + +E+ ++ + +SE +DL KY L+N ++KYHS K
Sbjct: 1104 LEMRTNRQKMEKTLKTDYKNIDKEHKEQLIKTTISEYANNDLEKYGKALDNAILKYHSIK 1163
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAADVGTGS-EKRRTYNYRVVQKKNGIEQDMRNRC 1195
M IN I W + YQG DID I I +D S R++YNYRVV KN +E DMR RC
Sbjct: 1164 MDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTSTRKSYNYRVVMVKNEVELDMRGRC 1223
Query: 1196 SAGQRVLACLIIRLFISD---------------------------------------QKN 1216
SAGQ+VLA +IIRL +++ Q N
Sbjct: 1224 SAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLDQENINALAESLAEIIRERRQQAN 1283
Query: 1217 FQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
FQLIVITHDE F++ L D Y R+ RD
Sbjct: 1284 FQLIVITHDEGFLQRLAEQDVVEYYWRVSRD 1314
>gi|406606394|emb|CCH42168.1| DNA repair protein [Wickerhamomyces ciferrii]
Length = 1256
Score = 256 bits (654), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 330/1323 (24%), Positives = 609/1323 (46%), Gaps = 211/1323 (15%)
Query: 42 TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIV 101
TIIEC+K++ T + P S G F+HDP++ + E A V
Sbjct: 4 TIIECLKYSTTGDLPPN---------------------SKGGAFLHDPKMTDEKEVRAQV 42
Query: 102 KLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFAT--GVQKNLGCLQQESVL 159
KL T + ++ R++LL+ K AT T+ ++ A G + + E
Sbjct: 43 KLAFTNASGVSMICTRAMLLTVKR---TTATF-KTLEGQLLALHRGERTTISTKCAELDA 98
Query: 160 EMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDR 219
++ +GVSKAIL+ VIFCHQ+ S WPL E +K+ FDEIF+A K+ KAL++IK+ R
Sbjct: 99 QVPTYLGVSKAILDYVIFCHQDESLWPLAEPSVLKKRFDEIFEALKFTKALDNIKVIRKD 158
Query: 220 LRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQL 279
+ EI + + K+ AD K+ I + ++ + EE +EE ++ I ++ +L
Sbjct: 159 MAVEIKLLDQSVKHLKTDKERADRVKEKISVSNKQIEDYREETALLEEDLQRIAKESNEL 218
Query: 280 TEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDE- 338
+ + + ++ ++ K + + E + LE S + L D+ ++Q KL F+ + E
Sbjct: 219 FKSNQEFQKVLSKLESYKHSQRSLNEQISRLEDSTRLLPESDE-DIQYKLANFQSMVQEA 277
Query: 339 --KCSELENQERLKSQYIQEEKQSHTHI--NEAQMKLGKLERDEETHKKLNDTLKTKLNN 394
K ++L+ + K ++ +Q ++H+ E Q+K + E E ++ +T +N+
Sbjct: 278 QSKVNDLKYEVSDKQSNLKTLRQDYSHMIREEGQLKGKEAEYQENLQRR-----ETLVNS 332
Query: 395 LADTLCLDTTAKS-QYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINAL 453
+A L +D+++ Q E L+ S+ +++ S +K +R +D
Sbjct: 333 IASKLGIDSSSGDVQSFESELTSLVDNSERSLE---SLVKTAKRAEAD------------ 377
Query: 454 IVEKVEL--ESKIKSFKQQ------IEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV 505
+ +K++L +SK+K + + IE ++K++ +IN+++ ++ L+ +TKL +
Sbjct: 378 LSQKLKLVSDSKLKERQHRDYTLSDIEAHEKEIKAQNNKINDLDVNEGGLEYEKTKLEDL 437
Query: 506 NSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNR 565
+++++L + L +I+ + + LE EL I E+S Q A+I LK+
Sbjct: 438 ETKLNKLKGEKVVENLLKDIKTKNTEISNLEIELENIGNELSQSHKQADAHAKISLLKDE 497
Query: 566 KESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
K + + L E ++ F + + E+ S ++ T + R + D++ +
Sbjct: 498 KRYREKALAKLIETNNEIFQK--EQLNIEDLDKSYRAKVNKATAEAKRGEIDLSKLQDQF 555
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRM--ELVLGSKPFEDELDRVTLELKREQEEVSMM 683
LE+ S T+ + ++ L + + E+ G ++DEL + K E + +
Sbjct: 556 SKLESEASFKKTTISNYEKELESSLQKYNDEVEFGIDDYDDELGDAEKQYKLALENLKV- 614
Query: 684 TSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNN--KKTH 741
T T FN ++ E++ C LC+R F+ PGL N LK + E+TN +K+
Sbjct: 615 TKTTLEFNKKALEIAESDHSCFLCSRKFDDK---PGLTNFLKA----LKEKTNGDAEKSF 667
Query: 742 IDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETP 801
+ + + + L L+ + + + + + +L+ K+ LE V +++ KK+++ T
Sbjct: 668 QEDVVETKEYLDSLRSLSQIVDR-----VKTLKDKVKTLESEVAKSEPGYKKVESEFTTQ 722
Query: 802 KTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS-------TGVDLDQVLA 854
K K A L + + E+ ++ +L S++S + LD++
Sbjct: 723 KAKADEAKHKLESLNDIKNAVSEITRMKHDLSNVSSQLSDKEKELNDYGYSAKSLDELQK 782
Query: 855 QQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQ-------GGAGM 907
+QKEK L R+++ T L + K + + + ++ K+L + +
Sbjct: 783 EQKEKHTTLKILRTEV---NTLLEEKDSKQREVSILEGNVKDKRLAISIIERGLVEKENL 839
Query: 908 LKSLEDRKCELEGMDSVYQTELEELGRK----VAPIETQLNLAQSELDALKKEHKKKLNE 963
LKS+E+ K ++ +L+E K + +E Q+N A SEL A ++E++ +
Sbjct: 840 LKSIEEYKNKI--------VKLQEQAAKSNGILEELEEQVNQASSELSAKQRENEVSIKN 891
Query: 964 EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN----QRKEDIIAKRG 1019
+ ++ + +E + I Y + +LA +E V ++ + +E+I
Sbjct: 892 QQNEVSKFKDHQKEFSNLNGSITYYVDVDS-KKLAKCQEEVSLISTLIAEHEEEI---ES 947
Query: 1020 VCERTINEINQSIANQSLEEIDLKNNLTL----------------------------LEK 1051
R +E + +A+ S EE +LKNNL + E+
Sbjct: 948 TLARVSDE-EKKLADTSSEERNLKNNLDIRHMQKQLDNIEHDIESLDAQNAESERDRYEE 1006
Query: 1052 KEAV-----AKLNEEL--KLSEIMISDLTKYHHTLENCVIKYHSQ---KMRSINRLIREY 1101
+ AV +K+N +L K+ E+ +E+ V ++ + + + + + +E
Sbjct: 1007 RSAVLREQYSKMNADLAGKMGEV---------KQIEDQVKQFEKELRTEFKQVEQAYQEE 1057
Query: 1102 WTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
W + L+ ++ +DL Y L++ +++YHS KM+ INR I E W Y G D+D I
Sbjct: 1058 WVK---LQTKTLVSNDLNTYSKALDSAIMQYHSIKMKEINRTIDELWKGTYSGTDVDTIM 1114
Query: 1162 IAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------- 1213
I +D T S+ RTYNYRVV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1115 IKSDQNTASKGNRTYNYRVVMVKQDAELDMRGRCSAGQKVLASIIIRLALAECFGTNCGV 1174
Query: 1214 -------------------------------QKNFQLIVITHDEEFIENLTA---IDRAY 1239
QKNFQLIVITHDE+F+ + A D Y
Sbjct: 1175 IALDEPTTNLDAENIESLARSLGNIIEMRQSQKNFQLIVITHDEKFLTYMNAAKYTDHFY 1234
Query: 1240 VVR 1242
VR
Sbjct: 1235 KVR 1237
>gi|448122948|ref|XP_004204571.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
gi|448125219|ref|XP_004205129.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
gi|358249762|emb|CCE72828.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
gi|358350110|emb|CCE73389.1| Piso0_000424 [Millerozyma farinosa CBS 7064]
Length = 1308
Score = 256 bits (654), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 342/1376 (24%), Positives = 635/1376 (46%), Gaps = 216/1376 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L I GIR+F ++ ++F PLTLI G+NGCGKTTIIEC+K+A T + P A
Sbjct: 1 MSSLYKLSIQGIRSFDPERQEAIQFGFPLTLICGQNGCGKTTIIECLKYATTGDLPPNAK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F++DP I + A VKL N ++ + +++
Sbjct: 61 GGA---------------------FINDPSIASRSSVTAQVKLAFVNANGKSMILTKTMQ 99
Query: 121 LSNKNGKDNCA-----TRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
L+ K + + T D ++ + G + + E + +GVS+AIL+ V
Sbjct: 100 LTKKRTRTGTSSNTFKTLDGQLA--VMDKGNKTTMSTKNSELYSSVPMYLGVSRAILDYV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKA---HYQ 232
IFCHQ++S WPL E +K+ FD+IF+A+K+ K L+++K R + +I I H +
Sbjct: 158 IFCHQDDSLWPLSEASVLKKRFDDIFEASKFTKVLDNLKTIRKDMTTDIKLIDQSVQHLK 217
Query: 233 ATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
N K+ + K + + +K EL E + E L Q ++ + Q
Sbjct: 218 IDKNRAKKINEKVTSLNDLVEKYSSEIAELTVQIEKRESEAESLFQANQEFQETLAKYEQ 277
Query: 293 YQ-TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
T K+ +D I+ L S+IK D L+ +LN F+ N++ +E+ + ++
Sbjct: 278 LNFTLKSYKDQIER----LTSTIKISSEPDDVILE-ELNNFETNVENANRNIEDLTKSRN 332
Query: 352 QYIQEEKQSHTHINEAQMKLGKL-ERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
IQE N G L ++ E HK K KL +LA LD + Q
Sbjct: 333 TQIQELSNLRNEQNSFIRNEGSLRSKESEFHKN-----KEKLASLA----LDFSKLHQID 383
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSD--NENTKQAEINALIVEKVELESKIKSFK 468
E K + + +++ L+ +++ N++Q E+ + + + +S I +
Sbjct: 384 SMEINDDEKRVNNVMKRMQDEVEKLDEAYNEMTTNNSEQLEVKEALYQ--DTKSSISREE 441
Query: 469 QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAW 528
Q ++ + + +I ++ + +S + L KL +EI+QLS LD + + ++ A
Sbjct: 442 QNLQYCQSEQNKIINKLANLRKSTEESRGLDNKLELEKTEIEQLSLKLDEKRSQLDLVAL 501
Query: 529 IRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF 588
R ++L + ++ E L + ++ N+ A I+L+ E D L
Sbjct: 502 QRSIDDLSSSVNHLEFECEELSRKIVS-------SNKSSDIHARISLISEEIDVKKKTLN 554
Query: 589 DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN----SSKTLRDQKR 644
++I + L +++++ FDI+ ++ I K L +L+ +S+ S ++ +K
Sbjct: 555 NIISNQR---DLFESVTNQLFDISNCEKII----KDLSSLKQKMSDELRDSLSSIERKKN 607
Query: 645 TLAELMDRMELVLGSKPFE--DELDRVTLELKREQ--------EEVSMMTS-TQYLFNSY 693
+L L+ E +L +K + ++L ++ EL +E+ EEV TQ N++
Sbjct: 608 SLETLLKSKEELLNAKKLQTANQLKTISNELSKEEISSFEKILEEVQENYHITQEALNTF 667
Query: 694 ----------IGKLEENEPRCPLCTRFFESDYSVPGL---VNKLKTKIKEIPEQTNNKKT 740
IG + E+ C LC R F+S PGL ++ LK +K++ + K
Sbjct: 668 EVSKQFKIKAIG-VAESSNNCALCLRDFDS----PGLKKFLDFLKADVKKM-----DVKE 717
Query: 741 HIDQLCKQQRSLQELKPVYENIM---KLQDTDIPSLRSKLIELEENVIETKGELKKLKTA 797
D L ++ L ++ V+ N++ KL D + +L S+ IE+ + I + + K
Sbjct: 718 LEDNLNTSKKELDSIRSVHSNVIEYRKLND-ECEAL-SQEIEMLKTQISDQDNALRSKVD 775
Query: 798 LETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR-------STGVDLD 850
L+ P ++ G+L L +N+ +L +L ++ + ++ +R ++ LD
Sbjct: 776 LKEPLNRDI------GNLDTLRKNVSDLISLNDDIISKTKGLTELRDQLMVYGTSDQSLD 829
Query: 851 QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS 910
+ Q EK +++ R ++ R++ + + + +N++ K+L++ +L +
Sbjct: 830 DLQKAQTEKNDKIKDLRRQLSE---RVDLKYSAQRDISRLENEMKDKRLSISNIEKLLMN 886
Query: 911 LED-----RKCELEGMDSVYQTEL---EELGR-KVAPIETQLNLAQ--SELDALKKEHKK 959
+ R CE E ++ + Q E E LG+ K + +E + ++ + + + ++ E +
Sbjct: 887 NTNIKTSIRDCE-ENLEELKQREKKHHEVLGKLKSSFLEKEKDMKEYRNRVKQIETEASE 945
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
KL+E + ++++T I+ I Y K + QL + + ++ +R ++
Sbjct: 946 KLHETKSLLENFT-------LIRQNIDQYIKHDS-AQLETITKKLKASEERISELEKDIK 997
Query: 1020 VCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTK----Y 1075
E I E + ++ S + +L++NL L + + + ++++ E+ ISD + Y
Sbjct: 998 KLELEIKEKEKVLSESSNIKSELRDNLELRNSQREIESI--QVQIEELNISDAQEKKEDY 1055
Query: 1076 H----------------HTLENCVIKYHSQKMRSI-NRLIREYW---TRIYQ----LKLS 1111
H H + I+ ++RS+ + L+ EY +R ++ L+ +
Sbjct: 1056 HKKSRNIRDLLTQLNADHAGKVGEIRQMKDQIRSLRSELMHEYKDVDSRFHEEWIKLQTN 1115
Query: 1112 EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE 1171
++ +D+ Y L+N ++KYH KM INR++ E W++ Y+G DID I+I +DV S+
Sbjct: 1116 MLVSNDIQTYSRALDNAIMKYHGMKMEEINRILAELWSQTYRGTDIDSIAIKSDVSVQSK 1175
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRL---------------------- 1209
R+YNYRVV + E DMR RCSAGQ+VL ++IRL
Sbjct: 1176 GNRSYNYRVVMYRQSTELDMRGRCSAGQKVLTSILIRLALAECFGTNCGVIALDEPTTNL 1235
Query: 1210 -----------------FISDQKNFQLIVITHDEEFIENLTAIDR--AYVVRIVRD 1246
F +Q+NFQLIVITHDE+F+ ++ DR + R+ RD
Sbjct: 1236 DQENAESLAQALNKIIEFRKNQRNFQLIVITHDEKFLSHING-DRFTDHFYRVQRD 1290
>gi|358365293|dbj|GAA81915.1| DNA repair protein Rad50 [Aspergillus kawachii IFO 4308]
Length = 1294
Score = 256 bits (654), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 308/1338 (23%), Positives = 597/1338 (44%), Gaps = 157/1338 (11%)
Query: 10 MG--IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVH 67
MG +R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MGASVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--------- 51
Query: 68 DPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGK 127
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 52 ------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVATRSLQLTVKKTT 99
Query: 128 DNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPL 187
T + + + G + ++ E M +GVSKAIL++VIFCHQ+ S WP+
Sbjct: 100 RQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPM 157
Query: 188 DEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQL 247
E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++AD ++
Sbjct: 158 SEPSVLKKKFDEIFEAMKYTKAIDNIKSLRKKQNEELAKYKIMEQHAKEDKEKADRAEKR 217
Query: 248 IYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESC 307
+ + EE H + + M+ + E + ++ + S + + K+ E IQ +
Sbjct: 218 SIKLQDEIEALREETHQLSQEMRRVAELADKAWKESESYSQVLGALEGKRIEAKSIQTTI 277
Query: 308 NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK----QSHTH 363
+ L+ + +L D+ LQS L F + + + + QE K + E K Q+
Sbjct: 278 DNLKRHLVELDDSDEW-LQSNLEQF----ESRQLQYQQQEEAKKENYMELKEQIEQTRQR 332
Query: 364 INEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT 423
+ Q + GK E D+ ++ + + +A + + + E + ++ +
Sbjct: 333 LGVKQAEYGKFENDKANFERQVERRQRMTKEVARAHNIRGYDNVEDQADVDEFMRRVRKI 392
Query: 424 TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVIT 483
D+ L+ ++ + S+ + QA +N + +K L+ + K+QI N ++
Sbjct: 393 LKDQNLALERVKKEAQSELRDV-QATLNQIGQQKSALQESKNAAKRQIASNDREAATYQG 451
Query: 484 QINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVID 543
++NE+N + L++ + + S +DQ + EI+ Q +LEDE ++
Sbjct: 452 KLNEINVDEGVQAALESNIEDIGSRLDQAKERARSASWDKEIQNVNSQIRDLEDESSRLN 511
Query: 544 AEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFKNSLDK 602
E+ + LA + LK + + + +K H +R + E+ +
Sbjct: 512 TELIEATKKAGDLARLDHLKKELKERERGLETMKGAHGERLAKFVNANWRPESLEQDYQH 571
Query: 603 ALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPF 662
+ + ++R + + + + L +E + KTL +++ L E + + + +P
Sbjct: 572 VIEEESRHVSRAERERDGVSRELEQVEFKMKGVKKTLSQRQKELKECIKEIRDAVDDEP- 630
Query: 663 EDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEE---NEPRCPLCTRFFESDYSVP 718
+E + L+ ++ Q +++ + QY + Y+ + + C LC R F ++ +
Sbjct: 631 -EEYPEI-LKERQAQLDLARKDAEQYAGVSKYMADCLDTVKSANMCRLCMRTFRTENELQ 688
Query: 719 GLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK-- 776
NKL+ +K + I +L + + +E Y+ +L+ T+IP L +
Sbjct: 689 TFKNKLEGLVKRAKRVMED--DEIPRLEEDLNTAREASTAYDTWCRLKQTEIPDLEKEEE 746
Query: 777 ---------LIELEEN--VIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIREL 825
L +LEEN ++ K + KK +E+ T + ++ + +++L
Sbjct: 747 EYTAQQDKLLSQLEENDKIVSEKADKKK---EVESLSKTVSTIVRYDSEIKSIRSQVQDL 803
Query: 826 NTLQ------RELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNS 879
++ Q R LE + +I+G+ + + L++ +K + + +K+E
Sbjct: 804 SSKQHDTNASRTLEDIQDEIAGIGEKSRAMKKTLSKLTHEKEQTLSEMNKLE-------- 855
Query: 880 HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
LQ L+ K+++ + + ++ A +L +E E + +++ + + + +++ +
Sbjct: 856 ----LQ-LRDVKSNLDNVKFKLERKADLLARIE----EYKNLNNQQREAIAKADKEIEDL 906
Query: 940 ETQLNLAQSELDALKKE---HKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQ 996
+L Q++ D + + +K + +E +++ + QLE EI Y +RG Q
Sbjct: 907 TPELLKVQAKYDDISQRAEAREKDMQQEISQLYENVHQLELANE---EIDAYNERGGPHQ 963
Query: 997 LAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVA 1056
L + +Q + ++ ++ + IN+I+ + + + +NLT + ++
Sbjct: 964 LERSKRELQSIENEISNLEIEQANITKEINKISAQLKDSENTKRQYADNLTYRQATRSLD 1023
Query: 1057 KLNEELK--LSEIMISDLTKYHHTLE------NCVIKYHSQKMRSI----NRLIR--EYW 1102
+ EE++ ++ D +++ E N + + KM + ++L++ W
Sbjct: 1024 AVTEEIEQLAAQNAEVDRSRFKEESERRAREHNALAAKQASKMGEMKGKDDQLMQLLADW 1083
Query: 1103 TRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
Y+ ++ ++ + DL +Y L+ ++KYH KM IN +I E W +
Sbjct: 1084 NTDYKDAAGKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIISELWQK 1143
Query: 1151 IYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
Y+G D+D I I +D ++ R+YNYRV K G E DMR RCSAGQ+VLA +IIRL
Sbjct: 1144 TYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLASIIIRLA 1202
Query: 1211 ISD---------------------------------------QKNFQLIVITHDEEFIEN 1231
+++ Q NFQLIVITHDEEF+ +
Sbjct: 1203 LAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRH 1262
Query: 1232 LTAIDRA-YVVRIVRDHK 1248
+ D + Y R+ R+ K
Sbjct: 1263 MQCGDFSDYYYRVSRNEK 1280
>gi|312069949|ref|XP_003137920.1| rad50 family protein [Loa loa]
Length = 1364
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 355/1412 (25%), Positives = 617/1412 (43%), Gaps = 237/1412 (16%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M+LLD + + GIR+ P + N V+ F PLT+I G NG GKTTIIE +K+ T E P+
Sbjct: 81 MSLLDTVELQGIRSVGVGPQNAN-VIEFLSPLTIICGTNGAGKTTIIEALKYVTTGELPK 139
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G S + F+HD R+ + AS F D R G+ CVV
Sbjct: 140 G--SFQTFIHDMRLADRSRVDASVKLKF-RDVR-GRS-------------------CVVT 176
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFAT--------GVQKNLGCLQQESVLEMCNLIGVSK 169
++ +K K +T + I+ K + G K+L + E+ NL+G+
Sbjct: 177 RRIMQSKGAKVKHSTSEGKITNKSEESTIAIEKEPGEWKSLSSKVVDCRKEILNLLGLPT 236
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALE-----------SIKIQRD 218
AIL V+FCHQE SSWPLDE KK+KE FDEIF T Y KA+E ++I
Sbjct: 237 AILEYVVFCHQEESSWPLDEPKKLKERFDEIFQVTGYVKAMEILRKELKENQQELRIIEG 296
Query: 219 RL----RKEIPEIKAHYQATLNYKKE-ADSKKQLIYNNTQKRDQSFEELHNIEESMKPIN 273
RL R++ +I+ H + +N K + A+++K+++ T ++E N
Sbjct: 297 RLPLLIRQQEEKIELHNE-YINLKGQVAENEKEILLKQTV-----------LKEDTAKKN 344
Query: 274 EKLVQLTEKERNMSVMSTQYQTKKTERDMIQES----CNELESSIKQLFSGDKAELQSKL 329
K+ +L E E K +RDM++ +++E + + G L+ ++
Sbjct: 345 LKIAELDEAE-----------MLKKKRDMMEAEKQVLLDQIECCLALDYEGGIENLKREI 393
Query: 330 NLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLK 389
L E E+ ER + + E + I E K KK D ++
Sbjct: 394 ELIN-----HSDEFEDMERNRKRINAEIDELSAEIKEYVAK-----------KKEIDKMR 437
Query: 390 TKL----NNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENT 445
K+ +T CL +++ T G++K I+K +I + + +
Sbjct: 438 CKMIAEREQCLETYCLRFNLRNEQT-----GILKQLHHLIEKRKEEISNFKNRMEEKQTN 492
Query: 446 KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV 505
Q E++ + ++ +KI+ ++ + +KD+ + E S L LQ ++ +
Sbjct: 493 CQKEVDDISGTLAQVSAKIELRNEECKRLEKDIAAAKCNLMEAANSSDKLDRLQEEILKQ 552
Query: 506 NSEIDQL-SKSLD--PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSL 562
+E+D + K L+ D LKNE + + L+ E C+ + I I ++ +
Sbjct: 553 ENELDVMREKELENNVDDLKNERDGIANRIELLKKEYCMRENAEGI--ENKIKQRSVELV 610
Query: 563 KNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKE 622
K KE +N+LKE+H A +F E F S +T + ++ ++ E
Sbjct: 611 KFEKE-----LNILKEKHQIALLEIFS-TKEPEFPLS-----ERLTIYARKAEQSLSTAE 659
Query: 623 KHLYTLEANVSNSSKTLRDQKRTLAELMDRME---------LVLGSKPFEDELDRVTLEL 673
E VS + + R + L D++ +V E LD + L
Sbjct: 660 DEFKICEKEVSRAQFAISQIDREMDYLSDQIGSYRRKITQVIVTHENEVETRLDEIRTLL 719
Query: 674 KREQEEVSMMTSTQYLFNSYIGKLEENEPR--CPLCTRFFESDYSVPGLVNKLKTKIKEI 731
++ Q++ + +L+ + EE R CPLC + S L K+K + K++
Sbjct: 720 RKSQQDSGRIDGCMFLYEQW---EEEVVMRKCCPLCEHSYSSTEGPVVLKEKIKQRKKDL 776
Query: 732 PEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGEL 791
+ + Q L E+ P Y ++K +++ L+ L + EE + + E
Sbjct: 777 AKDAEKLIRKVKDYEAVQNELLEIVP-YVEMLKQSNSEKEKLQGNLKKAEEKLHNVEAEF 835
Query: 792 KKLKTALETPKTKEKTALSLQGDLTLLDQNI--------RELNTLQRELERQESKISGMR 843
K K+ + K +QGD +L+D NI ++ L+ E+ E K +
Sbjct: 836 AKSKSERDIILQKLDVIRDVQGDASLMD-NIWKSLSDAKHDMTLLKTEVGTAECKERSLS 894
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQG 903
+ +++ Q + KE N+L+ I+ + N EKL ++ + + K + +
Sbjct: 895 AIRIEIRQNEDRFKELINKLDL----IQVSASERNKLIEKLNESKELRTALCKKGVQIDS 950
Query: 904 GAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNE 963
+K L D V + ELEE + + ++ Q + ++EL K+E K N+
Sbjct: 951 ----IKKLLD----------VKEKELEESEQGLQKLKAQKPIVEAELQMKKEERFAKQND 996
Query: 964 ---EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGV 1020
+ A++ + E+ R +LE++N +L + +S + L +++D++
Sbjct: 997 AKNKEAELLCSLRDAEDAAR-ELEVMN-------KKLQDITDSSEDLKDQEQDLLKID-- 1046
Query: 1021 CERTINEINQSIANQSLEEID-----------LKNNLTLLEKKEAVAKLNEELKLSE--- 1066
T+ ++ + +E+ID L + L LE +E + LNE LK +E
Sbjct: 1047 ---TVISVSNAKMRDLVEQIDCLKLKQERKHRLDDQLRKLELRERIKSLNESLKEAEWHG 1103
Query: 1067 IMISDLTKYHHTLENCV--IKYHSQKMRSINRLIR------------------EYWTRIY 1106
I +L K +L + V ++ + R L R E+ +
Sbjct: 1104 TAIPELRKELSSLSSQVNDLQLMIENKRGAKLLKRLAVMEKILASSEYAQFKEEFKKEVV 1163
Query: 1107 QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV 1166
+ + + +I DL Y ++ V+++H+QKM IN ++ W ++Y GNDI+ I I ++
Sbjct: 1164 KKCVVKRVIEDLANYIRAVDKSVVEFHTQKMEEINEVLSSLWEQVYHGNDIEAIQIKSES 1223
Query: 1167 GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDE 1226
+EK+++YNYRVV G E DM RCSAGQ++LA ++IR+ +SD + +I DE
Sbjct: 1224 AGENEKKKSYNYRVVMYVGGTEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDE 1283
Query: 1227 EFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVI 1286
NL V++ + D LA+ S C A++ + FQLIVI
Sbjct: 1284 P-TANLD------VLKNLGD--MLADIISARC----------------ANNARMFQLIVI 1318
Query: 1287 THDEEFIENLTAIDRA-YVVRIVRDHKGLSDI 1317
THD F+E+L + R +V + +D GLS +
Sbjct: 1319 THDNRFVEHLRQLCRPEWVYSVSKDDTGLSRV 1350
>gi|15292523|gb|AAK93530.1| SD05424p [Drosophila melanogaster]
Length = 781
Score = 255 bits (652), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 215/765 (28%), Positives = 377/765 (49%), Gaps = 72/765 (9%)
Query: 572 DINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN 631
+++ ++ RH F LF N++ S+ + +I + E N ++ + E
Sbjct: 21 EVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIK 80
Query: 632 VSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQY 688
N + D R EL D EL+ S P++D L+R + + Q + + S++
Sbjct: 81 RKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSEA 137
Query: 689 LFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ 748
L+ YI K++E EP CPLC SD + L ++L +I+++P+ + + +
Sbjct: 138 LYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQIK 195
Query: 749 QRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTA 808
+L +LKP + +L+D+ +P + +L ++EE + ++ E + L + P + A
Sbjct: 196 YENLLQLKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMELA 254
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRS 868
S+ GD++LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R
Sbjct: 255 NSMMGDMSLLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSKELETERK 314
Query: 869 KIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTE 928
++ES Q + + L L+++KN + KQ+ ++ G L L++R +L + +E
Sbjct: 315 ELESAQNAVQQQMDALNRLREKKNSLKDKQIHLREGLQSLPQLKERLEKLNSFLTTVASE 374
Query: 929 LEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY 988
+ EL K+ P++ L A E + LKK +KL + +K Y ++++R+ E +Y
Sbjct: 375 ISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDQDIQRLNKEAEDY 434
Query: 989 TKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
K ++ L E + + + A+ + + I +NQ E DLK+N L
Sbjct: 435 AKLDLRNEIKKLDEIIMASKDKLRKLEAEISLKTDELETIKTECSNQQTVERDLKDNREL 494
Query: 1049 LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI-------------------KYHSQ 1089
+ ++ AKL E ++ + + +L + + E + + HSQ
Sbjct: 495 KQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVNLTKQRDKATVRKGELLGQLGEIHSQ 554
Query: 1090 KMRSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKM 1137
+N+L RE + Y+++++ + I DL +Y LE +I++HS+KM
Sbjct: 555 ----VNKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEKM 610
Query: 1138 RSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR R
Sbjct: 611 EMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRGR 670
Query: 1195 CSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETF 1254
CSAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 671 CSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEAL 719
Query: 1255 SRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 720 --NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 750
>gi|261205742|ref|XP_002627608.1| DNA repair protein Rad50 [Ajellomyces dermatitidis SLH14081]
gi|239592667|gb|EEQ75248.1| DNA repair protein Rad50 [Ajellomyces dermatitidis SLH14081]
Length = 1300
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 313/1331 (23%), Positives = 587/1331 (44%), Gaps = 149/1331 (11%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 6 VRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN------------- 52
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 53 --------SKGGAFIHDPKLCGEKEVLAQVKLSFKSMSGARMVATRSLQLTVKKTTRQQK 104
Query: 132 TRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGK 191
T + + + G + ++ E M +GVSKAIL++VIFCHQ+ S WP+ E
Sbjct: 105 TLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPS 162
Query: 192 KVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNN 251
+K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +AD ++
Sbjct: 163 VLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADRAEKRSIKL 222
Query: 252 TQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELE 311
++ + E H + + M+ E + ++ + + + + K+ E IQ S L+
Sbjct: 223 QEEIEALRAESHELSQQMRKAAELADKAWKESESYAQILGTLEGKRIEAKSIQASITNLQ 282
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ----SHTHINEA 367
+ ++ D+ L+ L+ F+ ++ E +E LK +Y+ E KQ + T +
Sbjct: 283 EHLVEVDESDEW-LERTLDQFE---SQQIQYREQEESLKEKYM-ELKQVIEDNRTRLGLK 337
Query: 368 QMKLGKLERDE---ETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQ-- 422
Q + GK E D+ E + + L ++ + D + + + K+S+
Sbjct: 338 QAEYGKHENDKAQFERQLRRREKLIKEIARQNNIRGFDDDLDDMQVSDFMQRIRKLSKDQ 397
Query: 423 -TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNV 481
T+++ + ++ R Q+ +N L K L+ + ++QI N + +
Sbjct: 398 NQTLERARREAQMELREV-------QSLLNQLSQRKSTLQEVKNASRKQISSNDIEADSH 450
Query: 482 ITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCV 541
+++E++ + + VL++++ + + + + I+ + LEDE
Sbjct: 451 QRRLDEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSEIRLLEDESSK 510
Query: 542 IDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFKNSL 600
++AE+ + LA + LK + + + ++ H DR L
Sbjct: 511 LNAELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTREWNPSTLDQEY 570
Query: 601 DKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSK 660
+AL T + R++ D + + L E + + K L+ ++ L + + ++ + +
Sbjct: 571 QRALQETTNALTRVERDRDGVSRELEHAEFKLKTTRKDLQQRRNELKQCIQKIRDAVDDE 630
Query: 661 PFE--DELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR---CPLCTRFFESD 714
P E D L + ++L +++ + QY Y+ K + + C +C+R F+++
Sbjct: 631 PAEYPDILKQRQVQL-----DMAKKDADQYAGLGEYLSKCMDAAKQKKVCRMCSRPFKTE 685
Query: 715 YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLR 774
+NKL +K + ++ + QL + + Q + Y+ ++L T+IP+L
Sbjct: 686 GEFQIFLNKLDALVKRATQDAVDES--MQQLEEDLEAAQGVSTFYDTWVRLSTTEIPALE 743
Query: 775 SKLIELEENVIETKGEL----KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQR 830
+ +LE E ++ K + +E+ K E + ++ ++ D I+ L + +
Sbjct: 744 KEESQLESQREELLSQIEDHDKIVSERVESKKNVESLSKTV-ATISKYDGEIKTLRSQVQ 802
Query: 831 ELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQ 888
+L + +SG R T D+ + ++ EK EL SK+ E Q+R ++ +L+
Sbjct: 803 DLLANQQDVSGSR-TLEDIQEQISAIGEKSRELQKIISKLNNEKDQSRT-----EITALE 856
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
+ D+ S SL R E +++ ++ +E+ + + +++ AQ+
Sbjct: 857 LKLRDVRSNLDNANYQLEKKASLAARVEEYRKLNAKHRESIEKADHDIESLVPEVSKAQA 916
Query: 949 ELD-----ALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRES 1003
D A +EH+ +L E +++ D QL+ EI +Y +RG QL +
Sbjct: 917 RYDDIASRAEAREHELQL--EASQLSDSLHQLDLANE---EITSYNERGGPAQLIKCEKE 971
Query: 1004 VQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN---E 1060
V L + ++G + IN I+ + + + +NL + A+ +N E
Sbjct: 972 VHNLESEIASLEKEQGSITKDINAISTRLKDSENTKRQYADNLRYRRETAALEDVNATIE 1031
Query: 1061 ELKLSEIMIS-----DLTKYHHTLENCVIKYHSQKMRSI----NRLIR--EYWTRIY--- 1106
EL + + ++ N + + KM + ++L++ W Y
Sbjct: 1032 ELSAQNAEVDRSRFREESERRTREHNALSARQASKMGEMKSKDDQLMQLLADWNTDYKDA 1091
Query: 1107 ---------QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
+++ ++ + DL +Y L+ ++KYHS KM INR+I E W + Y+G D+
Sbjct: 1092 TVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDV 1151
Query: 1158 DYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---- 1213
D I I +D ++ R+YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1152 DTILIRSD-NENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGV 1210
Query: 1214 -----------------------------------QKNFQLIVITHDEEFIENLTAIDRA 1238
Q NFQLIVITHDEEF+ ++ D +
Sbjct: 1211 NCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQANFQLIVITHDEEFLRHMQCGDFS 1270
Query: 1239 -YVVRIVRDHK 1248
Y R+ R+ +
Sbjct: 1271 DYYYRVSRNER 1281
>gi|157863722|gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 316/1376 (22%), Positives = 603/1376 (43%), Gaps = 173/1376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S+WPL + +K+ F +IF AT+Y KALE IK +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFGDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKD 219
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
+A + I + +K D ++ +++ +++ + K+++ ++ + Q TK T
Sbjct: 220 QAYRLRDSIAQDQEKSDALKTQMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATA 279
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ----ER-LKSQYI 354
R + L+ S + + +L ++ +EK + LE + ER + +Y
Sbjct: 280 R----STYFTLQEQQYAALSEENEDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYA 335
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ S T IN++ ++GKL+ + + H + + + + + L + +T +
Sbjct: 336 KSSLLSET-INDSTREIGKLQAEADAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTND-- 392
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
I M+ T K + + LE + + T + ++ L +++ ++ QI+
Sbjct: 393 ---IAMNLTNRTK--ARLSNLEDDLQEKKKTNETQLEFLWGRYLKVNARYSEVDGQIQSK 447
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SEIDQLSKSLDPDQLKNEIEAWIRQRN 533
K+ V+ +I + ++ +T+L+R N + ID+ + L + + I R +
Sbjct: 448 KESKIGVLRRIKD---KENERDAAETELSRHNLARIDERERHLQIEVERKTIALGERDYD 504
Query: 534 ----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK--------LADINLLKERHD 581
+ E+ +D +I L + +A + + E K + E D
Sbjct: 505 LIISQKRSEIYTLDHKIKTLHREKDNIATDADDRVKLELKKDELEKCKKKLKKIYDEHKD 564
Query: 582 RAFHLLFDMIP-EENFKNSLDKALSSITFDINRI--------------QEDINAKEKHLY 626
+ +L +P E++ K + +A S+ + N + Q I+A + HL
Sbjct: 565 KFRSVLKGRLPHEKDVKKEITQAFGSVGSEYNDLNSKSQEAEQQLKLAQMKIDAAKSHLS 624
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
L+ + K L + +++A++ +++ K +D +D E ++ S
Sbjct: 625 KLQKVLDAKRKHLNSKLQSIAKV--SVDINAYPKILKDAMD----ERDKQTNNFSYAKGM 678
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKT-------KIKEIPEQTNNKK 739
+ ++ + K+ +CP C R F D V K +T ++K + E + +
Sbjct: 679 RQMYEPF-EKVARQHHKCPCCDRAFTPDEE-DLFVKKQRTTGTSTAERLKVLAENLSVAE 736
Query: 740 THIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+Q L L+ +Y+ +KL+ IP L +L + E + L + L
Sbjct: 737 DLFNQ-------LDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQISDDLVSVLA 789
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKE 858
K L + +D++++E+ L+ ++ E K+ R GV +D++ +
Sbjct: 790 QVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVRDLEYKLDS-RGQGVKSVDEIQLELIS 848
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
+ +T +++ + + +E L + Q + + + ++L K E+
Sbjct: 849 VQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKKAEEDLVHF 908
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
+ + L + P+ + E ALK+ ++ ++ + + + ++++ +
Sbjct: 909 AKEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRGFQQEIDVL 968
Query: 979 KRIKLEILNYTKRGTLTQLAALRE-------SVQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ I Y + +L L+E +QK RK+DI + +++ Q
Sbjct: 969 GTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVE-------LDKSKQL 1021
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI----------SDLTKYHHTLEN 1081
+ +Q + ++ +NL + K V +L +++L E + +DL ++ E
Sbjct: 1022 LRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKER 1081
Query: 1082 CVIKY----------------HSQKMRSINR--LIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ +Y H +++ + + Y+ ++ Q K +E+ DL +Y+
Sbjct: 1082 LLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQQKTTEMANKDLDRYYA 1141
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQ 1182
L+ ++++H+ KM IN++I+E W + Y+G DID ISI +D G G+ R+Y+YRVV
Sbjct: 1142 ALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGT---RSYSYRVVM 1198
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RA 1238
+ G E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL + A
Sbjct: 1199 QNGGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEP-TTNLDGPNAESLAA 1257
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
++RI+ K Q+NFQLI+ITHDE F +
Sbjct: 1258 ALLRIMESRKG----------------------------QENFQLIIITHDERFAQ 1285
>gi|367051913|ref|XP_003656335.1| hypothetical protein THITE_2120798 [Thielavia terrestris NRRL 8126]
gi|347003600|gb|AEO69999.1| hypothetical protein THITE_2120798 [Thielavia terrestris NRRL 8126]
Length = 1311
Score = 254 bits (650), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 355/1399 (25%), Positives = 650/1399 (46%), Gaps = 190/1399 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I+G+R+F + F PLTLIVG NG GKTTIIEC+K+A T E P S
Sbjct: 1 MSRIEKLSILGVRSFGPQHPETIAFNSPLTLIVGYNGSGKTTIIECLKYATTGELPPN-S 59
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVK-LQCTCENN--DTVCVVR 117
G F+HDP + + + A +F +G E++ I + +Q T + N +
Sbjct: 60 KGGAFIHDPNLAGEKDVRAQVRVSFR--STVG---ESYVITRNVQLTVKKNTRSQKTLEG 114
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKAILN 173
SLLL N + +TR V+E+ L+ GVS A+L+
Sbjct: 115 SLLLRNNGERHLISTR------------------------VMELDKLVPEKLGVSPAVLD 150
Query: 174 NVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQA 233
VIFCHQ+ S WP+ E +K+ FDEIF+A +Y K ++++K+ R + +E+ +K
Sbjct: 151 AVIFCHQDESLWPMSEPAALKKRFDEIFEAMQYTKLIDNMKVLRKKKGEELSRLKLQETH 210
Query: 234 TLNYKKEADSKKQLIYNNTQK----RDQSFEELHNIEESMKPINEKLVQLTEKERNMSVM 289
K++AD +L+ T++ RD+ E L ++E I +K Q ++VM
Sbjct: 211 DKQNKEKADEVDRLMSRLTREIQEARDRCNELLQKMDEESARIKDKYEQANS---FLAVM 267
Query: 290 STQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERL 349
+ QTKK + + E+ L I++L D+ L++ LN ++ S
Sbjct: 268 NN-LQTKKEKLEYKNEAIEVLRGRIEELPQTDQV-LETILNEYEETYQHTVS-------- 317
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLER-----DEETHKKLNDTLKTKLNNLADTLCLDTT 404
++ K + H +A++KL + + ++ H+ D + +L D + D
Sbjct: 318 ----ARDSKAAQFHQLQAELKLAREQHTAKAAEQGKHQSDKDKYERQLET-RDRMIHDAA 372
Query: 405 AKSQYTPEEG---EGLIKMSQTTIDKYLSD----IKILERTFSDNENTKQAEINALIVEK 457
+ + +G + I I K LSD ++ L+R +D + K A I K
Sbjct: 373 TRHEIRGYDGDLDDRRIAAFNERIQKILSDKKRELERLQRDNADEFDKKTAIITDRESRK 432
Query: 458 VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
L S KQ+I K+ + +++ ++ + T VL+T++ + + I +++K+
Sbjct: 433 ASLIRDRSSAKQRIVTVGKESATLQAELSSLDIDEGTEAVLRTEMKELEARI-EMTKT-- 489
Query: 518 PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKS----LKNRKE---SKL 570
++ + +++A I++ N D++ ++A+ S L + + + S L RK+ +
Sbjct: 490 -EEQRADLDAQIKKAN---DDIYRLEAQSSKLARELVECTRLASERAQLDLRKKQLTERR 545
Query: 571 ADINLLKERHDRAFHLLF--DMIP---EENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
++++LK + L D P E F+N+L + + + R Q+D A ++ L
Sbjct: 546 RELDILKSTWEAQLSALLGSDWQPDTIETEFQNALKRQNTEVAE--CRKQKD--ATQQEL 601
Query: 626 YTLEANVSNS-------SKTLRDQKRTLAELMDRMELVLGSKPFED---ELDRVTLELKR 675
+E +SN+ S D KR + + + + S P ED E++ + EL +
Sbjct: 602 KQVEYKLSNARERHNRLSTEKEDCKRAVTKALKDVR-NPDSPPIEDYTKEVESIEAELGQ 660
Query: 676 EQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQT 735
+ ++ + + + S I +C C R F+ P +KL KI +
Sbjct: 661 TETDLKLYDEMKKHYVS-IRDRAVRFNKCYYCERDFKDQ---PAAKSKLLDKIAKKLNDE 716
Query: 736 NNKKTHIDQL--CKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKK 793
+ ++ DQ+ Q ++L+ ++ Y+ ++L+ ++PSL +K I L + + +G +++
Sbjct: 717 DKQELMDDQVHFTDQLKTLRAVRSQYDTFLRLE-AELPSL-NKEISLASS--QREGLIRR 772
Query: 794 LKT---ALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER-QESKISGMRSTGVDL 849
L+ A + K + +L + + Q +++ +R++ER Q+S MRS
Sbjct: 773 LEDQDLAFREAEDKRQEIDALSKHVLKISQTHKDIMDAERQVERSQQSSSITMRSP---- 828
Query: 850 DQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQ----KNDIHSKQLTVQGGA 905
D++ +Q + ++K+ ++L + ++L+ L Q + ++ K T
Sbjct: 829 DEINEEQTACAEQTRLAQAKV----SKLTTERQRLKDLAAQLEVERLELKHKISTAVQRL 884
Query: 906 GMLKSLED--RKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNE 963
KSL++ R+C+ E S + ++E +++ +E ++ A++ L+ +++ + K +
Sbjct: 885 ERKKSLQESIRRCKEE--QSQLRDAVQEADKEIERLEPEIASARAALEEARQQGRAKEQK 942
Query: 964 EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCER 1023
+ + E+K I EI +Y RG + LA+ + ++ L E++ ++
Sbjct: 943 VAEERDGLATTVSELKMINSEIQDYLDRGGPSNLASNQRAIASLETTIENLESEARDLTV 1002
Query: 1024 TINEINQSIANQSLEEIDLKNNLTL---LEKKEAVAKLNEELKLSEIM--ISDLTKYHHT 1078
IN++ + I N + ++ ++ +NLT L ++E + EEL+ LT+
Sbjct: 1003 QINKLTKDIDNSNAKKRNIADNLTYRKNLREREVLQAEIEELQSRNAHEDYDRLTQEARY 1062
Query: 1079 LENCVIKYHSQKMRSINRLIRE--YWTRI---YQLKL----------------SEIMISD 1117
LE+ K +++ R + + + + R+ Y+++L + I D
Sbjct: 1063 LESSRAKLAAERERLMGSMASKDAEFARLNDQYEIELKGALDKYLETHVLVETTRAAIED 1122
Query: 1118 LTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV--GTGS-EKRR 1174
L L+ ++ +HS KM IN I E W YQG DID I I +DV G GS RR
Sbjct: 1123 LGVGVTALDKAIMHFHSMKMEEINNTIGELWQSTYQGTDIDTIQIRSDVEAGAGSGPGRR 1182
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTA 1234
YNYRV K E DMR RCSAGQ+VLA +IIRL +++ +I DE T
Sbjct: 1183 NYNYRVSMIKGDTEMDMRGRCSAGQKVLASIIIRLALAESFGINCGLIALDEP----TTN 1238
Query: 1235 IDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
+D + ++LAE+ + A+ IK Q N QLIVITHDEEF++
Sbjct: 1239 LDSDNI-------RSLAES------LHAI--------IKARRSQSNLQLIVITHDEEFLK 1277
Query: 1295 NLTAIDRA-YVVRIVRDHK 1312
++ D R+ RD K
Sbjct: 1278 HMQCSDFCDDFYRVKRDEK 1296
>gi|389631835|ref|XP_003713570.1| DNA repair protein RAD50 [Magnaporthe oryzae 70-15]
gi|351645903|gb|EHA53763.1| DNA repair protein RAD50 [Magnaporthe oryzae 70-15]
Length = 1316
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 346/1428 (24%), Positives = 597/1428 (41%), Gaps = 292/1428 (20%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L + GIR+F + V F PLTLIVGENG GKTTIIEC+K+A T E P +
Sbjct: 1 MSKIEKLGVRGIRSFGPTNAQFVTFNTPLTLIVGENGSGKTTIIECLKYATTGEQPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + A VKL + V RSL
Sbjct: 61 GGA---------------------FLHDPKLAGESVIKAQVKLSFYSTIGQQLVVTRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
++ K N T D T+ ++ G +L E + +GV AIL NVIFCHQ
Sbjct: 100 VTQAKKKLNVKTIDGTL--RVETNGEHVSLSKKNAELDEMVPEKMGVPAAILENVIFCHQ 157
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDR--------------------- 219
++S WPL E +K+ FDE+F+A KY KA++++K+ R +
Sbjct: 158 DDSLWPLSEPSVLKKKFDELFEAIKYTKAIDNLKLLRKKHGEQLRIFKNLEETSKQDKEK 217
Query: 220 ----------LRKEIPEIKAHYQATLN----YKKEADSKKQ-----------------LI 248
L EI E++ Y+ TL+ Y+KE +K+Q L
Sbjct: 218 GERYGKAIKVLEAEIAELEKKYKTTLDKMDKYRKEEATKRQEANSFFGIVTDLQNKKVLY 277
Query: 249 YNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCN 308
Q D+ E + + +S + + L Q +K + M +T K TE
Sbjct: 278 EERKQMADELLETIERMSDSEEELEAALSQYADKVKQMKDDATGKTAKYTE--------- 328
Query: 309 ELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS---QYIQEEKQSH---- 361
GD L+ L + + ++ E+ +R S ++E Q H
Sbjct: 329 ---------LKGDLGALRKSLQDKLADRGKHVADKEHHDRQVSARLSMVKEAAQQHGIRG 379
Query: 362 --THINEAQMK-----LGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ EAQ+K + KL +++ + D KL D TA+ +
Sbjct: 380 FDGDLTEAQVKSFENRVQKLLDEKKREVAVYDQELEKLKTSHGKAVADLTARRES----- 434
Query: 415 EGLIKMSQTTIDKYLSDI----KILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
+ ++ + K +SDI K L+R+ D A+ L +LE++++
Sbjct: 435 ---LNRARDSAQKRISDIDLRLKGLQRSVGDLHVDDGAKA-VLDSNSTQLETELREAYNA 490
Query: 471 IEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
++ ++ D +E+N++ L LQ + +R+N+E+ Q + L +E
Sbjct: 491 LQQSELD--------DEINEANDNLGRLQGEASRLNNELVQCT------HLASERAQLDL 536
Query: 531 QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDM 590
+R E E+ QN+ L + + K + LA + E + + + D
Sbjct: 537 RRKEAEN--------------QNVYLKSVMATWGDKLAALAGGPVEPETIGKVYQQILD- 581
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELM 650
+++ S K+L ++ Q++I + Y + + +KT +D +R +
Sbjct: 582 --QQSAAVSAKKSL------VDEAQQEIRQLD---YKVSSAREEVTKTTKDTERAEKAVC 630
Query: 651 DRMELVLGSKPFEDELDRVTLELKR---EQEEVSMMTSTQYLFNSYIGKLE------ENE 701
D + + SK +D++ V L R QE +S+ + +LF++ E E +
Sbjct: 631 DAL---MQSKDEDDDVHPVHTYLDRLASLQESLSVAETDLHLFDALAEYYEKAKKKMERD 687
Query: 702 PRCPLCTR-FFESD-YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
+C LC R F +SD + LV K+ + + ++ N I +L KQ L+ ++ Y
Sbjct: 688 NKCTLCERSFGDSDKFFKSKLVQKIVKNLDQTQKEVVN--ADIQRLRKQVDILRAVRTNY 745
Query: 760 ENIMKLQDTDIPSLRSKLIELE---ENVIETKGELKKLKTALETPKTKEKTALSLQGDLT 816
+ + + +P L KL +LE E +I + L K +ALE + + S+ +
Sbjct: 746 DTYQRTK-AQLPPLEEKLQDLESEKEAMIRKQETLDKEMSALEDKRLDTE---SMGKAVR 801
Query: 817 LLDQNIRELNTLQRELER---QESKISGMRST-----------------GVDLDQVLAQQ 856
+ + ++ ++++ER Q+S +RS + L++++A +
Sbjct: 802 SITDAVAKIADSEKQIERLASQQSSSGNIRSAHEIQEAQVKNSEQTRALSLQLNKLVADR 861
Query: 857 KEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKC 916
+ KK+ ++ Q +L+ N+K++ +KND ++K +E K
Sbjct: 862 QRKKDLISQLELNKSELQRKLSEFNQKVE----RKND-------------LIKQIESLKT 904
Query: 917 ELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLE 976
E + M Q +E +++ +E L A+S D ++KL + + + +
Sbjct: 905 ERDQM----QETKDEGAKELEDLEQNLFKAESIRDEEVGRAREKLQKATEQKNLVAETVG 960
Query: 977 EVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQS 1036
++K + +I +Y RG AA +++ L Q E + + IN + Q N
Sbjct: 961 KLKSLSSDIQDYLDRGGPGLAAANDRTIKNLEQSLERMESDITKLTAEINNLRQEADNSD 1020
Query: 1037 LEEIDLKNNLTL---------LEK----------KEAVAKLNEELKLSEIMISDLTKYHH 1077
++ ++++NL LEK +E +L+ E + ++ DL+ H
Sbjct: 1021 RKKKNIQDNLAYNRTLRIVDKLEKEIEALEDRNAQEDWERLDGEANMLKMKFDDLSGKSH 1080
Query: 1078 TLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEI-------MISDLTKYHHTLENCVI 1130
L+ + +++ + ++Y + + + I I D+ Y LE ++
Sbjct: 1081 VLKGTLETKKAEQASRVAEYQQDYSDARLKFREAHIKVETTKAAIEDMGSYSAALEKAIM 1140
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV---GTGSEKRRTYNYRVVQKKNGI 1187
YHS KM +NR+ E W YQG DID I I ++V T S RRTYNYR+ K
Sbjct: 1141 SYHSLKMEEVNRIADELWRSTYQGTDIDTILIRSEVETSATASTTRRTYNYRLCMVKQDT 1200
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISD---------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1201 EMDMRGRCSAGQKVLASIIIRLALAESFGVSCGLIALDEPTTNLDEANIRSLAVSLHNII 1260
Query: 1214 -----QKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
Q NFQLIVITHDE F+ + D VR + T SR
Sbjct: 1261 QARQAQSNFQLIVITHDEAFLRAMQCSDFCDTFYRVRRDEMQRSTISR 1308
>gi|392863946|gb|EJB10719.1| rad50 [Coccidioides immitis RS]
Length = 1355
Score = 254 bits (648), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 341/1390 (24%), Positives = 589/1390 (42%), Gaps = 267/1390 (19%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 59 VRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGELPPN------------- 105
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
S G F+HDP++ + E A VKL + + V RSL L+ K
Sbjct: 106 --------SKGGAFIHDPKLCHEKEVLAQVKLAFKSTSGARMVVTRSLQLTVKK----TT 153
Query: 132 TRDTTISRKIFAT--GVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDE 189
+ T+ ++ T G + ++ E M +GVS+AIL+NVIFCHQ+ S WPL E
Sbjct: 154 RQQKTLEGQLLMTKEGERTSISSRVAELDQIMPQYLGVSRAILDNVIFCHQDESLWPLSE 213
Query: 190 GKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIY 249
+K+ FDEIF+A KY KA+++IK LRK+ E A Y+ Y KE K
Sbjct: 214 PSVLKKKFDEIFEAQKYTKAIDNIKA----LRKKQNEELAKYKIMEQYAKEDKDKADRAE 269
Query: 250 NNTQKRDQSFEEL----HNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQE 305
+ + + E L H + + MK + + ++ + + + + K+ E IQ
Sbjct: 270 KRSIQLQEEIEALRAESHELSKEMKKAADLADKAWKESESYAEILGALEGKRIEVKSIQT 329
Query: 306 SCNELESSIKQLFSGDKAE--LQSKLNLFKINLDEKCSELENQERLKSQYI--QEEKQSH 361
S + L+ + L D++E L+S L F + E +E LK +Y+ +E + +
Sbjct: 330 SIDNLK---QHLVEVDESEEWLESTLEQFG---SRQAEYREQEESLKEKYVDLKENIERN 383
Query: 362 TH-INEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKM 420
H + Q + GK E D+ ++ + L D ++ EG+ +
Sbjct: 384 RHQLGLKQAEYGKHENDKAQFERQVER--------RGKLIRDIARQNNLRGFEGD----L 431
Query: 421 SQTTIDKYLSDIKILER----TFSDNENTKQAE-------INALIVEKVELESKIKSFKQ 469
+ I++++ ++ L R T + Q E +N L K L+ + +
Sbjct: 432 DEMEINEFMQRLQKLSRDRNQTLDRAKREAQVELREVQSLLNRLSQRKSALQEGKNAARN 491
Query: 470 QIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
QI N K+ + ++NE+ + L +L++++ + Q + +++
Sbjct: 492 QISQNDKEADSYQHRLNEIEIDEGKLAILESRIEETEGRLQQAKDKAKTASWEKDLQTKN 551
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLF 588
+ LE+E +++AE+ + LA + LK + + + + H DR L+
Sbjct: 552 AELRSLEEESSLLNAELIEGTKKAGDLARLDHLKKELKDRERSLETMASAHGDRISQLIS 611
Query: 589 DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAE 648
N + L+ T + + Q D + K L +E + N+ K+L+ K+ L +
Sbjct: 612 QAWNPSNIEQEFQSVLNEATVSLTKAQRDRDGASKELEYIEVTMKNARKSLQQHKQELDD 671
Query: 649 LMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTS--TQYL-FNSYIGKLEENEPR-- 703
+ R+ + +P E+ D V K++Q + M QY Y+GK E +
Sbjct: 672 CVQRIREAIDDEP-EEYPDVV----KQKQSSLEMAKKDVDQYAGLGEYLGKCLEAARQKK 726
Query: 704 -CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENI 762
C C R F+++ KL+ +K+ N + ++ QL + + + Y+
Sbjct: 727 VCRTCGRGFKTEKEFHDFSLKLENLLKKAT--MNAEDENVVQLEEDLEIARNAQTYYDTW 784
Query: 763 MKLQDTDIPSLRSKL-------------IELEENVIETKGELKKLKTALETPKTKEKTAL 809
++L +T IP ++ +E + ++ KGE K+ +E+ T
Sbjct: 785 VRLSNTTIPEAEKEISRLELEREELLVKVEDHDAIVSEKGESKR---DIESLSKTVATIA 841
Query: 810 SLQGDLTLLDQNIRELNTLQ-----------------------RELERQESKISGMRS-T 845
+G++ L I++L+T Q REL+R +KI+ R +
Sbjct: 842 KYEGEIKTLKVQIQDLSTKQQQPGSSRTLEEIQDMIATIGEGCRELKRAIAKITNERDQS 901
Query: 846 GVDLDQVLAQQKEKKNELNTFRSKIE---SGQTRL----NSHNEKLQSLQKQKNDIHSKQ 898
++ ++ Q ++ ++EL+ R +++ S + RL N + ++ +S++K +DI S
Sbjct: 902 RTEITELELQLRDVRSELDNARFQLDKKASIEARLEEYRNLNTKQRESIEKADHDIESLV 961
Query: 899 LTVQGGAGMLKSL----EDRKCELEG-----MDSVYQ-----------------TELEEL 932
V + E R+ EL+ DS++Q +LE
Sbjct: 962 PEVSKAQAKFDDINARAEQRERELQQEVSSLSDSLHQLDLASEDIVSYNDRGGPRQLERS 1021
Query: 933 GRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG 992
R+V I ++ ++E +L ++ LN A++QD E KR + L Y R
Sbjct: 1022 KREVENITKEIEQLEAEQGSLTRQ----LNAVSARLQDS----ENTKRQYSDNLRY--RR 1071
Query: 993 TLTQLAALRESVQKLNQRKEDIIAKR--GVCERTINEINQSIANQS--LEEIDLKNN--L 1046
+ L +R + +L + ++ R +R E N A Q+ + E+ K+N L
Sbjct: 1072 EMRALGEVRAEIARLEAQNAEVDRARFKEESDRRTREYNFLSATQASKMGEMKSKDNQLL 1131
Query: 1047 TLL-----EKKEAVAKLNE---ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLI 1098
LL + K+A K E +++ ++ + DL +Y L+ ++KYHS KM INR+I
Sbjct: 1132 QLLADWNTDYKDAAFKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHSLKMEEINRII 1191
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
E W + Y +G D+D
Sbjct: 1192 EELWQKTY----------------------------------------------RGTDVD 1205
Query: 1159 YISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----- 1213
I I +D ++ R+YNYRVV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1206 TILIRSD-NENAKGNRSYNYRVVMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVN 1264
Query: 1214 ----------------------------------QKNFQLIVITHDEEFIENLTAIDRA- 1238
Q NFQLIVITHDEEF+ ++ D +
Sbjct: 1265 CGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHMQCGDFSD 1324
Query: 1239 YVVRIVRDHK 1248
Y R+ R K
Sbjct: 1325 YYYRVSRSDK 1334
>gi|323303327|gb|EGA57123.1| Rad50p [Saccharomyces cerevisiae FostersB]
Length = 1278
Score = 254 bits (648), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 331/1328 (24%), Positives = 607/1328 (45%), Gaps = 210/1328 (15%)
Query: 36 NGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKD 95
NG GKTTIIEC+K+A T + P S G F+HDP+I +
Sbjct: 2 NGSGKTTIIECLKYATTGDLPPN---------------------SKGGVFIHDPKITGEK 40
Query: 96 ETHAIVKLQCTCENNDTVCVVRSL-LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQ 154
+ A VKL T N + V R++ LL K ++ I +G + L
Sbjct: 41 DIRAQVKLAFTSANGLNMIVTRNIQLLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRS 98
Query: 155 QESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
E ++ +GV KAIL VIFCHQE+S WPL E +K+ FDEIF A K+ KAL+++K
Sbjct: 99 LELDAQVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK 158
Query: 215 IQRDRLRKEIP-EIKAHYQATLNYKKEADSKKQLIYNNTQ---KRDQSFEELHNIEESMK 270
++K++ +IK Q+ + K + D K + N Q K DQ EE+ IE +
Sbjct: 159 ----SIKKDMSVDIKLLKQSVEHLKLDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLN 214
Query: 271 PINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLN 330
I EK +L + ++ + ++ + K + I + L +SI + K +LQ+ L
Sbjct: 215 EITEKSDKLFKSNQDFQKILSKVENLKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLA 273
Query: 331 LFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKK------- 383
F L +K ++L + E S + + N + G+LE +ET++K
Sbjct: 274 NFSKVLMDKNNQLRDLETDISSLKDRQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSS 333
Query: 384 LNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDN 442
L + + K L++ D A+ + + + I T TID++ DI++ E SD
Sbjct: 334 LKEAFQHKFQGLSNIENSDM-AQVNHEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD- 391
Query: 443 ENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKL 502
+++ + ++S Q +E NKKD + +I E+ + + + L T+
Sbjct: 392 -----------LIKSITVDS------QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ- 433
Query: 503 NRVNSEIDQLS------KSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQ------ 550
+ +N E++ L +S + + + ++ I ++N +E+ +++ +I Q
Sbjct: 434 DSLNHELENLKTYKEKLQSWESENIIPKLNQKIEEKN---NEMIILENQIEKFQDRIMKT 490
Query: 551 -AQNITLAEIKSLKNRKESKLADINLLKER--HDRAFHLLFDMIPEENFKNSLDKALSSI 607
Q A++ +K +KL ++ + E+ +D +F + E F+ + D +
Sbjct: 491 NQQADLYAKLGLIKKSINTKLDELQKITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQ 547
Query: 608 TFDINRIQEDINAKEKHLYTLEANVSNS-------SKTLRDQKRTLAELMDRMELVLGSK 660
IN +Q++I K ++ L+ +N+ K L+D +++ +++ +L+ +
Sbjct: 548 KLFIN-MQKNIAINNKKMHELDRRYTNALYNLNTIEKDLQDNQKSKEKVI---QLLSENL 603
Query: 661 P-------FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFES 713
P + D L+ L K E + M +T FN ++ E + C LC+R FE+
Sbjct: 604 PEDCTIDEYNDVLEETELSYKTALENLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFEN 662
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IP 771
+ L+ +LKTK N +KT D + ++ L L+ + ++I+ L + I
Sbjct: 663 ESFKSKLLQELKTKT-----DANFEKTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKID 717
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS------LQGDLTLLDQNIREL 825
+ + L + +E +K +L +L+ +++ K K++ L+ L T L++ +++L
Sbjct: 718 NSQKCLEKAKEETKTSKSKLDELE--VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDL 775
Query: 826 ----NTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHN 881
T+ EL + G+++ +D++ QQ++ + L R I Q +
Sbjct: 776 ENSSKTISEELSSYNTSEDGIQT----VDELRDQQRKMNDSLRELRKTISDLQME---KD 828
Query: 882 EKLQSLQKQKNDIHSKQLTVQGGAGML-------KSLEDRKCELEGMDSVYQTELEELGR 934
EK++ + N I K+LTV L S+ ++ + +DS ++EL
Sbjct: 829 EKVRENSRMINLIKEKELTVSEIESSLTQKQNIDDSIRSKRENINDIDS----RVKELEA 884
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTL 994
++ ++ + + AQS LD +K E ++ + + D + ++ + I E++++ +G
Sbjct: 885 RIISLKNKKDEAQSVLDKVKNERDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG-- 942
Query: 995 TQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQS---IANQSLEEIDLKNNLTLLEK 1051
L+ ++++L K ++ + + NE+N+ +A+ + EE +LK NL L+E
Sbjct: 943 --FDELQTTIKELELNKAQMLELKEQLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIEL 1000
Query: 1052 KEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR--------------- 1096
K + + E+ ++ ++ + + E+ ++ +K+ S N
Sbjct: 1001 KSQLQHIESEISRLDVQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDS 1060
Query: 1097 -----------LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1145
+ + Y +L+ + D+ Y L++ ++KYH KM+ INR+I
Sbjct: 1061 LTHQLRTDYKDIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIID 1120
Query: 1146 EYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
E W R Y G DID I I +D + + K ++YNYRVV K +E DMR RCSAGQ+VLA +
Sbjct: 1121 ELWKRTYSGTDIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASI 1180
Query: 1206 IIRLFISD---------------------------------------QKNFQLIVITHDE 1226
IIRL +S+ QKNFQLIVITHDE
Sbjct: 1181 IIRLALSETFGANCGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDE 1240
Query: 1227 EFIENLTA 1234
+F+ ++ A
Sbjct: 1241 KFLGHMNA 1248
>gi|156848089|ref|XP_001646927.1| hypothetical protein Kpol_2000p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156117609|gb|EDO19069.1| hypothetical protein Kpol_2000p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 1305
Score = 254 bits (648), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 349/1380 (25%), Positives = 617/1380 (44%), Gaps = 212/1380 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P +
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGSNGSGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
G FVHDP+I + + A VKL T N + V R++
Sbjct: 61 GGA---------------------FVHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLVKKTTTTFKTLEGQLVA--INKEGDRSTLSTRALELDTQVPLYMGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQNVEHLK 213
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ---- 294
+ D K + N K ++E ++ +K I +L +LTE+ + + +Q
Sbjct: 214 VDRDRSK-VTKLNINKLSSKYKEY---QDQIKSIELQLRELTEQSDILFTSNQDFQKTLS 269
Query: 295 -------TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELEN-Q 346
TK + D+I N LE+SI ++ ++EL+ L F NL K E+ N +
Sbjct: 270 HIENLKGTKSSTSDLI----NRLENSI-EVMDLPESELKEILENFSENLKNKEIEVANLR 324
Query: 347 ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAK 406
+ L++ I E T ++ K G L+ D++++++ ++LK ++T A
Sbjct: 325 KELENDKINIENAQRTA-DQLLSKKGALDSDKKSYERSIESLKE----------IETQAI 373
Query: 407 SQYTPEEGEGLIKMSQTTIDKYLSD---IKILERT-FSDNENTKQAEINALIVEKVELES 462
+ Y + + T I +++SD ++ E T + + +N +I L +K +
Sbjct: 374 NNY------HIKPIDPTNIGRFISDLVSVQTQENTAYQEYKNKYNEKITELNKDKASITE 427
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS---KSLDPD 519
+ +Q++E N D + + + S + L ID+ + + L+ D
Sbjct: 428 LLAVQRQKLEYNLMDKDKIKKVVETLELDLSGSEFTDADLKNEKDSIDKYTSKFQQLEAD 487
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKER 579
+++ I+++N +E+ ++++E+ LQ + + + N++ A ++LLK
Sbjct: 488 DSVSKLSLKIKEKN---NEMVLLESELENLQERIMKI-------NQQSDLFAKLSLLKRS 537
Query: 580 HDRAFHLLFDM------IPEENFKNSLDKALSSITFDINR----IQEDINAKEKHLYTL- 628
LL D P N +D + I D N+ IQ+ I K L
Sbjct: 538 LAEKKKLLLDTENQFSQDPIAQSTNLVDS--NDIGIDFNKSYINIQKSIALNNKDTNELN 595
Query: 629 ----EANV--SNSSKTLRDQKRTLAELMDRMELVLGSK-PFEDELDRVTLELKREQE--- 678
EA++ +N + K + +L +E L P E+ D + L+ EQ
Sbjct: 596 KKHTEASIRSTNLQNDMFSNKELIEKLTKHLEDTLPEDCPIEEYGDML---LESEQSYKT 652
Query: 679 --EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKE-----I 731
E M T FN ++ EN C LC+R F+ + L+N+LK + + +
Sbjct: 653 ALENLKMHQTTLAFNKKALEIAENNNCCYLCSRAFDDESFKSSLLNQLKERTNDEFEVTL 712
Query: 732 PEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGEL 791
E ++KT +DQL K ++ + L + + +L + R + + + E + +
Sbjct: 713 KETVESEKTFLDQLRKLEKDIITLNTAKDKLTELT-SKSDEQRKVCDKFHDQLAEIEAKG 771
Query: 792 KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVD-LD 850
LK + + T K+ + L +T L R+L + ++ E K+ G GV ++
Sbjct: 772 NNLKESRDYFDTHLKSKVEL---ITRLKTETRDLQA-EVDMISDELKVFGGIENGVQTIE 827
Query: 851 QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS 910
++ ++Q+ + L T R ++ Q + + +L SL + + K ++ KS
Sbjct: 828 ELQSKQRTYNDTLRTSRKEVVQLQEEREAKSNELSSLMNLIKERNIKISQIEASLRRRKS 887
Query: 911 LE-DRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQ 969
+E D + + E + +E+L ++ ++ +L + +++ ++ + +
Sbjct: 888 IEEDFRTKREEYSEI-AGRIEKLNSEIIDLDNKLQKVLKDCKSVEDNFSRESTTKQEDVD 946
Query: 970 DYTKQLEEVKRIKLEILNYTKRGT------LTQLAALRESVQKLNQRKEDIIAKRGVCE- 1022
+ +++V + I NY +G+ + +L+++R + L KE++ +K
Sbjct: 947 SINRFIQQVDQYSSAIRNYESKGSTELDNCIRELSSVRNIIDSL---KENVDSKNKSLTD 1003
Query: 1023 --RTINEINQSIAN--QSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHH- 1077
R +N+ N N Q++E I LK+ L+ +E E ++ + E +E KY
Sbjct: 1004 QCRILNDSNNEKKNLLQNIELIGLKDKLSQIE--EQISSFDIENAENE-----RDKYQQE 1056
Query: 1078 --TLENCVIKYHSQK-------------MRSINRLIR--------EYWTRIYQLKLSEIM 1114
L N + K+ S+K + S+N+ ++ Y +L+ +
Sbjct: 1057 SLKLRNMIEKFSSEKAGKLGEMKQLQNQIESLNQQLKIDYKNVDDNYHKGWVELQTKSFV 1116
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRR 1174
D+ Y L++ ++KYH KM+ INR+I E W + Y G D+D I I +D S K +
Sbjct: 1117 TDDIDTYSRALDSAIMKYHGLKMQDINRIIDELWKKTYSGTDVDSIQIRSDEVGNSTKGK 1176
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------------- 1213
+YNYRVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1177 SYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLALSETFGINCGVIALDEPTTNLDEE 1236
Query: 1214 ------------------QKNFQLIVITHDEEFIENLTA---IDRAYVVRIVRDHKALAE 1252
QKNFQLIVITHDE+F+ ++ A D + V+ K+L E
Sbjct: 1237 NIESLAKSLNNIIQFRRNQKNFQLIVITHDEKFLNHMNAAQFTDHFFKVKRDERQKSLIE 1296
>gi|171694914|ref|XP_001912381.1| hypothetical protein [Podospora anserina S mat+]
gi|170947699|emb|CAP59861.1| unnamed protein product [Podospora anserina S mat+]
Length = 1320
Score = 253 bits (646), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 336/1380 (24%), Positives = 614/1380 (44%), Gaps = 168/1380 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I+G+R+F + + + F PLTLIVG NG GKTT+IEC+K+A T E P
Sbjct: 1 MSRIEKLSILGVRSFSPHEQQAIAFNTPLTLIVGYNGSGKTTVIECLKYATTGELPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+H+P + + + A VK+ + + R++
Sbjct: 59 -------------------SKGGAFIHEPELEGEKDVRAQVKVSFRSTIGEQYVLTRNVQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKAILNNVI 176
L+ K + T + ++ + A G + + V+E+ L+ GVS A+L VI
Sbjct: 100 LTVKKTTRSMKTLEGSLLLRGQAGGKSSDRHVISTR-VMELDKLVPEKLGVSPAVLEAVI 158
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQ+ S WP+ E +K+ FDEIF+A KY K ++++K+ R R +E+ E+K
Sbjct: 159 FCHQDESMWPMSEPSALKKRFDEIFEAMKYTKVIDNLKVLRKRKGEELRELKIQETQDKV 218
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
K+ AD +LI +Q+ +++ + +I + M +++ E+ + + Q K
Sbjct: 219 NKERADKVGRLIIQMSQEIEEAQTKCSDILKQMGAKAKEIKDKHEQANSFLKIVNDLQNK 278
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + E+ EL S I++L D L++ L + ++ ++ + ++ + + +
Sbjct: 279 TEKLEYKSEAIRELRSRIEELPDSDDV-LRNTLAEYAQTIERTVADRDRKQAQQQELQAD 337
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE- 415
KQS + GK + D++ +++ L T+ D + + + + +G+
Sbjct: 338 LKQSRDRHTAKVAEQGKHQSDKDKYER---QLATR-----DRMVHEAAERHEIRGYDGDL 389
Query: 416 --GLIKMSQTTIDKYLSD----IKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQ 469
LI+ I K L+D ++ L+++ ++ + K + I L K L S KQ
Sbjct: 390 DGDLIESFYERIQKALNDKKRELERLQKSNAEELDKKSSVIAELEGRKQSLNRDRASAKQ 449
Query: 470 QIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEI-----DQLSKSLDPDQLKN- 523
+I ++ V ++ ++ + + L+ ++ V + I D+ S LD DQ+K
Sbjct: 450 RIMAIGRESATVQGELGSLDVDEGSEAALRAEMKEVEARIEAAKADEQSADLD-DQIKKV 508
Query: 524 EIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRA 583
+ E W +LE + + E+ A++ K + + D+++LK
Sbjct: 509 QDEIW-----QLETQAAKLGRELVECTRLASERAQLDLRKKQLTDRRRDLDILKNTWSEQ 563
Query: 584 FHLLF--DMIP---EENFKNSLDKALSSITFDINRIQEDINAKE-KHL-YTLEANVSNSS 636
L + P E +F+++L K + R Q+D +E K + Y L +
Sbjct: 564 LSALLGANWTPDTVEADFQSALRKQDGVVAE--ARKQKDATQQELKQVEYKLSTTRDRHT 621
Query: 637 KTLRDQKRTLAELMDRMELVLG-SKPFEDELDRVTLELKREQEEVSMMTSTQYL------ 689
K L + K +++ + + P +D + K + E++ + S L
Sbjct: 622 KLLTEMKSCQRDVLKALRATRDENDPEHPPIDNYEAQTKHVETELAQIESDLKLTEEMKT 681
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLV-NKLKTKI-KEIPEQTNNKKTHIDQLCK 747
+ + + + E +C LC R F + V V NK+ + E+ ++ K
Sbjct: 682 YYTKVKTVAEKHNKCNLCDRDFHNQEDVKRRVFNKIAKALGDEVKQELEADKAD---FAA 738
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGE-----LKKLKTALETPK 802
+ R L+ ++ Y+ +L+ ++P+L ++L NV T+ E L+ A +
Sbjct: 739 RLRQLKAVRAQYDTYGRLE-KEVPTLSAEL-----NVCTTQKEDLVRRLEDKDLAFGKAE 792
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELER-QESKISGMRSTGVDLDQVLAQQKEKKN 861
+ + SL ++ + QN +++ +R++ER Q+S RS D++ +Q
Sbjct: 793 EQRREMDSLSKNVLKISQNHKDIQEAERQVERSQQSSSVTTRSP----DEINEEQ----- 843
Query: 862 ELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM 921
T+ + QTRLN + Q L+ + + ++L ++ +RK L+
Sbjct: 844 --TTYAEQTRVAQTRLNKLTVERQRLKDLASQLEVERLELRHKIATAAQQLERKKSLQDQ 901
Query: 922 DSVYQTELEELGRKVA-------PIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQ 974
++ E +L V +E ++ A+S LD +++ + K K
Sbjct: 902 IRRFKEEQAQLRESVQTADNDLEALEPEMATARSALDEVRQHGRAKEQNVTEKRDAIGGT 961
Query: 975 LEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIAN 1034
+ E++ I EI Y +RG + LA+ + ++ L I A+ IN++N+ I N
Sbjct: 962 VSELRMINGEIQEYLERGGPSNLASNQRAITTLEATIASIEAEMKDLTVQINKLNKEIDN 1021
Query: 1035 QSLEEIDLKNNLTL---LEKKEAVAKLNEELK------------LSEIMISD----LTKY 1075
++ ++ +NLT L ++ A+ + EELK L ++ D LT
Sbjct: 1022 SDAKKRNISDNLTYRKNLRERVALQQEIEELKSRKAEEDYQRLSLEARILEDQRGLLTAE 1081
Query: 1076 HHTLENCVIKYHSQKMRSINRLIREYWTRI-----------YQLKLSEIMISDLTKYHHT 1124
L V Q ++RL EY + +++ ++ I DL +
Sbjct: 1082 RERLMGSVASKDDQ----LSRLQEEYDLDLKGAKAKYKESHIKVETTKAAIDDLGRGTMA 1137
Query: 1125 LENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV----GTGSEKRRTYNYRV 1180
L++ ++++HS KM INR+I E W YQG DID I I +DV G+G +R YNYRV
Sbjct: 1138 LDHAIMQFHSLKMEEINRIIGELWRETYQGTDIDTIQIRSDVESGAGSGGGGKRNYNYRV 1197
Query: 1181 VQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYV 1240
K E DMR RCSAGQ+VLA +IIRL +++ +I D E T +D +
Sbjct: 1198 SMVKGDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALD----EPTTNLDSDNI 1253
Query: 1241 VRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
++LA + R IK Q N QLIVITHDEEF++++ D
Sbjct: 1254 -------RSLASSLHRI--------------IKARQSQGNLQLIVITHDEEFLKHMRCQD 1292
>gi|323331860|gb|EGA73272.1| Rad50p [Saccharomyces cerevisiae AWRI796]
Length = 1278
Score = 253 bits (645), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 330/1325 (24%), Positives = 605/1325 (45%), Gaps = 204/1325 (15%)
Query: 36 NGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKD 95
NG GKTTIIEC+K+A T + P S G F+HDP+I +
Sbjct: 2 NGSGKTTIIECLKYATTGDLPPN---------------------SKGGVFIHDPKITGEK 40
Query: 96 ETHAIVKLQCTCENNDTVCVVRSL-LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQ 154
+ A VKL T N + V R++ LL K ++ I +G + L
Sbjct: 41 DIRAQVKLAFTSANGLNMIVTRNIQLLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRS 98
Query: 155 QESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
E ++ +GV KAIL VIFCHQE+S WPL E +K+ FDEIF A K+ KAL+++K
Sbjct: 99 LELDAQVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK 158
Query: 215 IQRDRLRKEIP-EIKAHYQATLNYKKEADSKKQLIYNNTQ---KRDQSFEELHNIEESMK 270
++K++ +IK Q+ + K + D K + N Q K DQ EE+ IE +
Sbjct: 159 ----SIKKDMSVDIKLLKQSVEHLKLDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLN 214
Query: 271 PINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLN 330
I EK +L + ++ + ++ + K + I + L +SI + K +LQ+ L
Sbjct: 215 EITEKSDKLFKSNQDFQKILSKVENLKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLA 273
Query: 331 LFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKK------- 383
F L +K ++L + E S + + N + G+LE +ET++K
Sbjct: 274 NFSKVLMDKNNQLRDLETDISSLKDRQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSS 333
Query: 384 LNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDN 442
L + + K L++ D A+ + + + I T TID++ DI++ E SD
Sbjct: 334 LKEAFQHKFQGLSNIENSDM-AQVNHEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD- 391
Query: 443 ENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKL 502
+++ + ++S Q +E NKKD + +I E+ + + + L T+
Sbjct: 392 -----------LIKSITVDS------QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ- 433
Query: 503 NRVNSEIDQLS------KSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQ------ 550
+ +N E++ L +S + + + ++ I ++N +E+ +++ +I Q
Sbjct: 434 DSLNHELENLKTYKEKLQSWESENIIPKLNQKIEEKN---NEMIILENQIEKFQDRIMKT 490
Query: 551 -AQNITLAEIKSLKNRKESKLADINLLKER--HDRAFHLLFDMIPEENFKNSLDKALSSI 607
Q A++ +K +KL ++ + E+ +D +F + E F+ + D +
Sbjct: 491 NQQADLYAKLGLIKKSINTKLDELQKITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQ 547
Query: 608 TFDINRIQEDINAKEKHLYTLEANVSNS-------SKTLRDQKRTLAELMDRMELVLGSK 660
IN +Q++I K ++ L+ +N+ K L+D +++ +++ +L+ +
Sbjct: 548 KLFIN-MQKNIAINNKKMHELDRRYTNALYNLNTIEKDLQDNQKSKEKVI---QLLSENL 603
Query: 661 P-------FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFES 713
P + D L+ L K E + M +T FN ++ E + C LC+R FE+
Sbjct: 604 PEDCTIDEYNDVLEETELSYKTALENLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFEN 662
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IP 771
+ L+ +LKTK N +KT D + ++ L L+ + ++I+ L + I
Sbjct: 663 ESFKSKLLQELKTKT-----DANFEKTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKID 717
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS------LQGDLTLLDQNIREL 825
+ + L + +E +K +L +L+ +++ K K++ L+ L T L++ +++L
Sbjct: 718 NSQKCLEKAKEETKTSKSKLDELE--VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDL 775
Query: 826 NTLQRELERQESKISGMRSTGVD-LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
+ + +E I G+ +D++ QQ++ + L R I Q +EK+
Sbjct: 776 ENSSKTIS-EELSIYNTSEDGIQTVDELRDQQRKMNDSLRELRKTISDLQME---KDEKV 831
Query: 885 QSLQKQKNDIHSKQLTVQGGAGML-------KSLEDRKCELEGMDSVYQTELEELGRKVA 937
+ + N I K+LTV L S+ ++ + +DS ++EL ++
Sbjct: 832 RENSRMINLIKEKELTVSEIESSLTQKQNIDDSIRSKRENINDIDS----RVKELEARII 887
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
++ + + AQS LD +K E ++ + + D + ++ + I E++++ +G
Sbjct: 888 SLKNKKDEAQSVLDKVKNERDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----F 943
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEA 1054
L+ ++++L K ++ + + NE+N+ +A+ + EE +LK NL L+E K
Sbjct: 944 DELQTTIKELELNKAQMLELKEQLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQ 1003
Query: 1055 VAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR------------------ 1096
+ + E+ ++ ++ + + E+ ++ +K+ S N
Sbjct: 1004 LQHIESEISRLDVQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTH 1063
Query: 1097 --------LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+ + Y +L+ + D+ Y L++ ++KYH KM+ INR+I E W
Sbjct: 1064 QLRTDYKDIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELW 1123
Query: 1149 TRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
R Y G DID I I +D + + K ++YNYRVV K +E DMR RCSAGQ+VLA +IIR
Sbjct: 1124 KRTYSGTDIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIR 1183
Query: 1209 LFISD---------------------------------------QKNFQLIVITHDEEFI 1229
L +S+ QKNFQLIVITHDE+F+
Sbjct: 1184 LALSETFGANCGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFL 1243
Query: 1230 ENLTA 1234
++ A
Sbjct: 1244 GHMNA 1248
>gi|323346797|gb|EGA81076.1| Rad50p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1278
Score = 252 bits (644), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 330/1328 (24%), Positives = 607/1328 (45%), Gaps = 210/1328 (15%)
Query: 36 NGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKD 95
NG GKTTIIEC+K+A T + P S G F+HDP+I +
Sbjct: 2 NGSGKTTIIECLKYATTGDLPPN---------------------SKGGVFIHDPKITGEK 40
Query: 96 ETHAIVKLQCTCENNDTVCVVRSL-LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQ 154
+ A VKL T N + V R++ LL K ++ I +G + L
Sbjct: 41 DIRAQVKLAFTSANGLNMIVTRNIQLLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRS 98
Query: 155 QESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
E ++ +GV KAIL VIFCHQE+S WPL E +K+ FDEIF A K+ KAL+++K
Sbjct: 99 LELDAQVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK 158
Query: 215 IQRDRLRKEIP-EIKAHYQATLNYKKEADSKKQLIYNNTQ---KRDQSFEELHNIEESMK 270
++K++ +IK Q+ + K + D K + N Q K DQ EE+ IE +
Sbjct: 159 ----SIKKDMSVDIKLLKQSVEHLKLDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLN 214
Query: 271 PINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLN 330
I EK +L + ++ + ++ + K + I + L +SI + K +LQ+ L
Sbjct: 215 EITEKSDKLFKSNQDFQKILSKVENLKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLA 273
Query: 331 LFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKK------- 383
F L +K ++L + E S + + N + G+LE +ET++K
Sbjct: 274 NFSKVLMDKNNQLRDLETDISSLKXRQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSS 333
Query: 384 LNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDN 442
L + + K L++ D A+ + + + I T TID++ DI++ E SD
Sbjct: 334 LKEAFQHKFQGLSNIENSDM-AQVNHEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD- 391
Query: 443 ENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKL 502
+++ + ++S Q +E NKKD + +I E+ + + + L T+
Sbjct: 392 -----------LIKSITVDS------QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ- 433
Query: 503 NRVNSEIDQLS------KSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQ------ 550
+ +N E++ L +S + + + ++ I ++N +E+ +++ +I Q
Sbjct: 434 DSLNHELENLKTYKEKLQSWESENIIPKLNQKIEEKN---NEMIILENQIEKFQDRIMKT 490
Query: 551 -AQNITLAEIKSLKNRKESKLADINLLKER--HDRAFHLLFDMIPEENFKNSLDKALSSI 607
Q A++ +K +KL ++ + E+ +D +F + E F+ + D +
Sbjct: 491 NQQADLYAKLGLIKKSINTKLDELQKITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQ 547
Query: 608 TFDINRIQEDINAKEKHLYTLEANVSNS-------SKTLRDQKRTLAELMDRMELVLGSK 660
IN +Q++I K ++ L+ +N+ K L+D +++ +++ +L+ +
Sbjct: 548 KLFIN-MQKNIAINNKKMHELDRRYTNALYNLNTIEKDLQDNQKSKEKVI---QLLSENL 603
Query: 661 P-------FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFES 713
P + D L+ L K E + M +T FN ++ E + C LC+R FE+
Sbjct: 604 PEDCTIDEYNDVLEETELSYKTALENLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFEN 662
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IP 771
+ L+ +LKTK N +KT D + ++ L L+ + ++I+ L + I
Sbjct: 663 ESFKSKLLQELKTKT-----XANFEKTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKID 717
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS------LQGDLTLLDQNIREL 825
+ + L + +E +K +L +L+ +++ K K++ L+ L T L++ +++L
Sbjct: 718 NSQKCLEKAKEETKTSKSKLDELE--VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDL 775
Query: 826 ----NTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHN 881
T+ EL + G+++ +D++ QQ++ + L R I Q +
Sbjct: 776 ENSSKTISEELSIYNTSEDGIQT----VDELRDQQRKMNDSLRELRKTISDLQME---KD 828
Query: 882 EKLQSLQKQKNDIHSKQLTVQGGAGML-------KSLEDRKCELEGMDSVYQTELEELGR 934
EK++ + N I K+LTV L S+ ++ + +DS ++EL
Sbjct: 829 EKVRENSRMINLIKEKELTVSEIESSLTQKQNIDDSIRSKRENINDIDS----RVKELEA 884
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTL 994
++ ++ + + AQS LD +K E ++ + + D + ++ + I E++++ +G
Sbjct: 885 RIISLKNKKDEAQSVLDKVKNERDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG-- 942
Query: 995 TQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQS---IANQSLEEIDLKNNLTLLEK 1051
L+ ++++L K ++ + + NE+N+ +A+ + EE +LK NL L+E
Sbjct: 943 --FDELQTTIKELELNKAQMLELKEQLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIEL 1000
Query: 1052 KEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR--------------- 1096
K + + E+ ++ ++ + + E+ ++ +K+ S N
Sbjct: 1001 KSQLQHIESEISRLDVQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDS 1060
Query: 1097 -----------LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1145
+ + Y +L+ + D+ Y L++ ++KYH KM+ INR+J
Sbjct: 1061 LTHQLRTDYKDIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIJD 1120
Query: 1146 EYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
E W R Y G DID I I +D + + K ++YNYRVV K +E DMR RCSAGQ+VLA +
Sbjct: 1121 ELWKRTYSGTDIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASI 1180
Query: 1206 IIRLFISD---------------------------------------QKNFQLIVITHDE 1226
IIRL +S+ QKNFQLIVITHDE
Sbjct: 1181 IIRLALSETFGANCGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDE 1240
Query: 1227 EFIENLTA 1234
+F+ ++ A
Sbjct: 1241 KFLGHMNA 1248
>gi|429849881|gb|ELA25211.1| DNA repair protein rad50 [Colletotrichum gloeosporioides Nara gc5]
Length = 1307
Score = 252 bits (643), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 352/1413 (24%), Positives = 636/1413 (45%), Gaps = 221/1413 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L + GIR+F + + F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSKIDKLSVQGIRSFGGSRE-TISFYTPLTLIVGYNGSGKTTIIECLKYATTGEQPPN-- 57
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP++ + E A VKL T + RSL
Sbjct: 58 -------------------SKGGAFVHDPKLCGEKEVLAQVKLAFTSTSGLKFVATRSLQ 98
Query: 121 LSNKNGKDNCATRDTTIS------RKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNN 174
L+ K + T + +++ R + ++ V + + +E +GVS+AIL+
Sbjct: 99 LTVKKTTRSLKTLEGSLACNNNGERTVTSSRVAQMDEWIPRE--------LGVSRAILDY 150
Query: 175 VIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQAT 234
VIFCHQ+ S WP+ E +K+ FD+IF+A +Y KA++++K+ R + +E+ ++K
Sbjct: 151 VIFCHQDESLWPMSEPAALKKQFDQIFEAMRYTKAVDNLKLLRKKQGEELSKLKIF---- 206
Query: 235 LNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
+E D N +K D++ + +E ++ K ++ + M + Q +
Sbjct: 207 ----EEQDRI------NKEKGDRAEKRATELEAEIEAARAKCKTMSAE---MEDLQEQIR 253
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC--SELENQERLKSQ 352
K + + N+L+ QL + A K+ L +++ D++ + LE E S+
Sbjct: 254 EKHEQANSFLRIVNDLKFKRDQLTYREGAISDLKMTLEELSEDDEYLKNALEQYEERMSR 313
Query: 353 YIQEEKQSHTHINEAQMKLGKLERD-------EETHKKLNDTLKTKLNNLADTL--CLDT 403
Y +E ++ T NE Q + ++ + H+ D + +L + + + +
Sbjct: 314 YQEEADENKTQYNELQRDMTSSRKELSLKLAEQGKHQSDKDKYERQLQSRMELVRQAAEM 373
Query: 404 TAKSQYTPEEGEGLIKMSQTTIDKYLSDIK-ILERTFSDNENTKQAEINALIVEKVELES 462
Y + + IK I K L+D K LER +N N + ELE
Sbjct: 374 HGFRGYDGDLKDSQIKTFNERIQKLLADKKRDLERVQKENARELDQATNVI----TELEG 429
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+ + Q K+ L + ++N VLQ +NR++ ID+ +K++ Q +
Sbjct: 430 RKATMTQNRVFAKQRLGAIEKRVN----------VLQMDINRLD--IDEGAKAILDSQFE 477
Query: 523 NEIEAWIRQRNELEDELCVIDAEISI---------LQAQNITLAEIKSLKNRKESKLADI 573
+ +E+ +++ NE L D + + L+++N L R S+ A +
Sbjct: 478 D-VESRLKKANE---SLAAADFDAQLQQDNEKLWQLESENEKLGRELMECTRLASERAQL 533
Query: 574 NLLK-ERHDRAFHLLFDMIPEENFKNSLD---------KALSSITFDINRIQEDI----- 618
+L K E DR L D + +K+ LD + L S D+ + Q +
Sbjct: 534 DLRKKELSDRKRKL--DTLTN-TWKSKLDTHVGTAWQTETLESQYHDVIKSQNKVLAEAR 590
Query: 619 ----NAKEKHL---YTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTL 671
+A++KH Y L++ K + R +++ ++ V ED + L
Sbjct: 591 QKRESARDKHQKVDYRLKSAKETGQKKTAEASRCQETVVNALKSVRDGATIEDYEEEYKL 650
Query: 672 ---ELKREQEEVSMMTSTQYLFNSYIG--KLEENEPRCPLCTRFFESDYSVPG------L 720
+++ Q ++S++ + L + Y G K +++ +C LC R F+ +V L
Sbjct: 651 HEEDVETYQTDISLLDA---LADYYRGCQKTLQDKNKCRLCDRGFDDKQNVAKSRFSDKL 707
Query: 721 VNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIEL 780
V L KE E+ T++ SL+++KP YE +L +IP ++ + L
Sbjct: 708 VKFLDPNKKEKAEEDLANSTNL------LNSLRKVKPQYETYQRLM-AEIPGVKEECSSL 760
Query: 781 EENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER---QES 837
E + +L++ + K SL + + Q ++++ + +++R Q+S
Sbjct: 761 EAECEALERQLEEHDAIASAEEEKLNDVESLNKTVINITQALKDIKDSESQVDRIMSQQS 820
Query: 838 KISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSK 897
RS D++ Q ++ + ++KI T ++L +L+ +K+++ +K
Sbjct: 821 SSVASRSA----DEIHELQATCNEQIRSLKNKILKTSTERQRMKDQLNALELEKSELRNK 876
Query: 898 QLTVQGGAGMLKSLEDRKCELEGM--DSVYQTEL-EELGRKVAPIETQLNLAQS-ELDAL 953
+ L+ +D + +++ + D +Q EL + + IE ++ A+S D L
Sbjct: 877 ---LSKALNQLERKKDFQNQIQTLKDDQTHQRELISKADEDLEKIEPEITEARSVRNDTL 933
Query: 954 KKEHKKK--LNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLA-------ALRESV 1004
+K K+ + EE K+ + + E+K ++ +I +Y RG + LA AL +S+
Sbjct: 934 QKGRTKEQGIVEERDKVAN---SVTELKMVECDIQDYIDRGGPSNLASNERAIAALEKSI 990
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN---QSIAN-----QSLEEID-LKNNLTLLEKKEAV 1055
L++ D+ + ++ I+ + Q+I+N Q+L++++ L+ ++ LE ++A
Sbjct: 991 AGLDKEISDLTVRTNKLKQDIDNGDRKKQNISNNIKYRQNLQQLEVLRRDIQDLEARDA- 1049
Query: 1056 AKLNEELKLSEIMISDLTKYHHTL---ENCVIKYHSQKMRSINRLIREYWTRIYQ----- 1107
+E+ + L H L V+ + K + + R++ E W + Y+
Sbjct: 1050 ---DEDYRTLAAEAKQLENRHSRLVAERGSVMGQMTTKDKELERVLEE-WNQEYKDAAKK 1105
Query: 1108 -------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
++ ++ I DL +Y L+ +++YHS KM +NR+ E W YQG DID I
Sbjct: 1106 FRESHIKVETTKAAIEDLGRYSAALDKAIMQYHSLKMEEVNRIAGELWQSTYQGTDIDTI 1165
Query: 1161 SIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLI 1220
I +D S RR+YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1166 LIRSDNENASTGRRSYNYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCG 1225
Query: 1221 VITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKN 1280
+I DE T +D+ + K+LAE+ I + +N
Sbjct: 1226 LIALDEP----TTNLDKDNI-------KSLAESLH---AIIKARQAQSNF---------- 1261
Query: 1281 FQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1312
QLIVITHDEEF+ ++ D R+ RD K
Sbjct: 1262 -QLIVITHDEEFLRHMRCSDFCDSFFRVRRDDK 1293
>gi|366999578|ref|XP_003684525.1| hypothetical protein TPHA_0B04210 [Tetrapisispora phaffii CBS 4417]
gi|357522821|emb|CCE62091.1| hypothetical protein TPHA_0B04210 [Tetrapisispora phaffii CBS 4417]
Length = 1303
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 363/1383 (26%), Positives = 601/1383 (43%), Gaps = 259/1383 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P +
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGSNGSGKTTIIECLKYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP+I + + A VKL T N + V R++
Sbjct: 61 GGA---------------------FVHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L K + T D + I G + L + + +GV KAIL VIFCHQ
Sbjct: 100 LLVKKTNNTFKTLDGQLVS-ITQDGYRSTLSTRTTDLDTHVPLYMGVPKAILEYVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYKK 239
E+S WPL E +K+ FDEIF A K+ KAL+++K+ ++K++ +IK Q+ + K
Sbjct: 159 EDSLWPLSEPANLKKKFDEIFQAMKFTKALDNLKV----IKKDMSVDIKLLKQSVEHLKV 214
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ----- 294
+ D K +N +K E+ ++++K I +LV +T++ + + +Q
Sbjct: 215 DKDRSKATKFN-IEKLQHKCEQF---KKTVKEIESQLVDITKQSDEVFKTNQDFQKVLAH 270
Query: 295 --TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINL---DEKCSELENQERL 349
K R+ I N L +I + S E++ L +F + D++ +LEN
Sbjct: 271 LENLKRNREYISHQINRLSETI-NVISLPVEEIEQNLVIFDRDTATKDDQIKQLEND--- 326
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
I E KQ+ I E L E KL +NNL+ L QY
Sbjct: 327 ----ISELKQNVNQIQEQSNILL------EKQGKLKSYYDIYINNLSSLKNLKENVSRQY 376
Query: 410 TPEEGEGLIKMSQTTIDKYL----SDIKILERTFSDNENTKQAEINALIVEKVELESKIK 465
+ E + QT ++ +L + + L TFS+ E+ L +K L+ +
Sbjct: 377 NINK-EFSDETFQTALNDHLDKENNHLLQLNNTFSN-------ELEGLNSKKSTLDYDLV 428
Query: 466 SFKQQIEGNKKD-------LTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
QQ E NKKD L N+ T++ ++ ++ L V + L + ID+L K D
Sbjct: 429 VQLQQQEYNKKDKIKASEKLDNIHTELIKITCTEEELNVEKENLTKY---IDKL-KIADG 484
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE 578
+ ++ I++ N+ + +L+ + E+ + N++ A + L+K+
Sbjct: 485 NDTATDVNLEIKKEND----------HMLLLEKELEETQEMITKANKQSDLYAKLALIKK 534
Query: 579 RHDRAFHLLFD----------------MIPEENFKNSLDKALSSITFDINRIQEDINAKE 622
+LFD +I +EN + + + ++ ++ ED N K
Sbjct: 535 SSSEK-QMLFDKNLNILSMNPVILSEPIIIDENIEITFNTFFKNLQKNL----EDDNNKL 589
Query: 623 KHL---YTLEANV--SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLE----L 673
+ + YT EA++ N + L + + L ++ +L DE D LE
Sbjct: 590 QSITREYT-EADIRTENCKEELDKTENLIGRLEKKLVEMLPEDCPIDEYDDALLESEASY 648
Query: 674 KREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIK---- 729
K E + M +T FN ++ EN C LC+R F+S L+N+LK K
Sbjct: 649 KTAVENLKMHQTT-LAFNRKALEVAENSNCCYLCSREFDSTGLKSKLLNELKAKTNQQFE 707
Query: 730 -EIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETK 788
++ E ++K ++D L K ++ + L E + KL+ TD S ++K +L V
Sbjct: 708 LDLVETMKHEKEYLDSLRKLEKDVNSLFNERELVNKLK-TDFESNKTKSDKLRAEVKIQD 766
Query: 789 GELKKLKTALETPKTKEKTALSLQGDLTLLDQNI---RELNTLQRELER--QESKISGMR 843
+K LK LET + + L+++N +E+++L +L+ E K+ +
Sbjct: 767 AHIKSLKEKLETVTSTIRP---------LIEENFHLQKEISSLNNDLQNITDELKLYNIS 817
Query: 844 STGV-DLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL-----------QKQK 891
S G+ L+++ ++Q L R KI Q S ++ +L +K K
Sbjct: 818 SDGLLTLEELQSKQTLCNQTLREKRKKISLLQDGRESRAKEKATLSGIIKDRSLKVEKMK 877
Query: 892 NDIHSKQLTVQGGAGMLKSLE-DRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSEL 950
ND+ K+ SLE +R +LE + ++ + L + V ++ ++ + +
Sbjct: 878 NDLLKKE-----------SLENERNLKLEEVSNI-EVRLNSFEKDVKLLQNKITEINANI 925
Query: 951 DALKKEH------KKKLNEEGAKIQDYTKQLE---------------------EVKRIKL 983
LK +H KK++ E +K D K L+ E + KL
Sbjct: 926 TKLKDQHDKAALNKKEIIEGLSKTMDQFKTLQNSIKEFELTGNADLKACNEELEDYKSKL 985
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDII---------AKRGVCERTINEINQSIA- 1033
+ +N L+ L+E + N RK++++ K E+ IN I+ A
Sbjct: 986 KNINVAIDQKTANLSKLKEELIDSNSRKKNLMDNLELHSLKVKLSNTEKEINCIDVENAE 1045
Query: 1034 ---NQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK 1090
++ EEI NL + KL E +K + I L+ HT
Sbjct: 1046 RQRDKYQEEISRLRNLYEQLSADNAGKLGE-IKQLQNQIDSLSHQLHT-----------D 1093
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+ I+ + W + L+ + D+ Y L++ +++YH KM+ INR+I E W +
Sbjct: 1094 YKDIDNKYKTEWAK---LQTKTFVTEDINTYSKALDSAIMRYHGLKMQDINRIIDELWKK 1150
Query: 1151 IYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
Y G D+D I I +D + + K ++YNYRVV K E DMR RCSAGQ+VLA +IIRL
Sbjct: 1151 TYSGTDVDSIQIRSDETSSTVKGKSYNYRVVMFKQDAELDMRGRCSAGQKVLASIIIRLA 1210
Query: 1211 ISD---------------------------------------QKNFQLIVITHDEEFIEN 1231
+S+ QKNFQLIVITHDE+F+ N
Sbjct: 1211 LSETFGVNCGVIALDEPTTNLDEENIESLAKSLHNIIQFRQHQKNFQLIVITHDEKFLNN 1270
Query: 1232 LTA 1234
+ A
Sbjct: 1271 MNA 1273
>gi|361124395|gb|EHK96494.1| putative DNA repair protein RAD50 [Glarea lozoyensis 74030]
Length = 1344
Score = 251 bits (640), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 353/1436 (24%), Positives = 591/1436 (41%), Gaps = 291/1436 (20%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I G+R+F ++ + FQ PLTLIVG+NG GKTTIIEC+K+A T P
Sbjct: 36 MSSIEKLKIQGVRSFDNARSEYIHFQTPLTLIVGDNGSGKTTIIECLKYASTGILPPN-- 93
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVH+P++ + E A VKLQ N + V RSL+
Sbjct: 94 -------------------SKGGAFVHEPKLCGEKEVLAQVKLQFKDAKNSKLVVTRSLM 134
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKAILNNVI 176
L+ K + D + G + NL + V+EM ++ VS AIL +VI
Sbjct: 135 LTVKKNSRSATQIDCNFL--MIRDGERTNLS----KRVMEMDKIVPKYLAVSPAILESVI 188
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQ+ S WP+ E +K+ FDEIF+A KY KA++ +K R KEI E+K H
Sbjct: 189 FCHQDESLWPMSEPGPLKKKFDEIFEAMKYTKAIDQLKTVRKNQTKEIGELKIHEDNCRI 248
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY--- 293
K++AD ++ +T +D+ +E+ K + +KE ST Y
Sbjct: 249 NKEKAD---KVAKRSTALQDEIEVLTKQLEDLKKEVRVAAQDQKDKEDRAHSASTVYNEL 305
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER-LKSQ 352
Q +T+ ++E+ L +K++ D+ L+S L F D++ E + +E L++Q
Sbjct: 306 QASRTQARYLEENLANLRKHMKEMTESDEW-LESTLAHF----DQRMLEYKKEEADLRAQ 360
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLN-NLADTLCLDTTAKSQYTP 411
Y T +NEA + +++ K + K + NL L L A Q++
Sbjct: 361 Y--------TKLNEAAKAATEQLSKKQSEKGQHLAEKASFDRNLESRLQLVKEAAHQHSL 412
Query: 412 EEGEGLIKMSQ-----TTIDKYLSD----IKILERTFSDNENTKQAEINALIVEKVELES 462
+G ++ Q I+K D + L + + +KQ + +L +
Sbjct: 413 RGYDGDLEDDQIRDFVGRIEKLSKDKDRELDALSKKTDEELQSKQEVLTSLATSRTSKTQ 472
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+ + +Q I N K + + + + TL L+ LN + +DQL+K K
Sbjct: 473 EKVAARQTIASNDKKMNLKQNEAGNIKVDEGTLAALEASLNESKARLDQLNK-------K 525
Query: 523 NEIEAW---IRQRNELEDELCVIDAEI--SILQAQNIT--LAEIKSLKNRKESKLADINL 575
AW IR+ +L EL + + + ++ + A ++ +K + + ++
Sbjct: 526 YADAAWDVNIRKETKLLRELQAESSRLRNDLFESNKVVGEQARLQVIKKELKDRQTRLDT 585
Query: 576 LKERHDRAFHLLF------DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLE 629
+K ++ + D + E +F+ ++D + ++ D + Q+ N + L ++E
Sbjct: 586 MKATYNDQLASVVGGDWEADSL-EHSFQAAMDDRVQAVR-DAKKRQDAFN---QQLTSIE 640
Query: 630 ANVSNSSKTLRDQKRTL----AELMDRMELVLGS-----KPFEDELDRVTLELKREQEEV 680
+ SS +LR +K T+ E+M+ + L G + EL + ++ + Q+
Sbjct: 641 YKLKTSSDSLRQKKLTMQQCQKEVMESICLPNGDDLPSVDDYPAELADLEIQCQAAQKN- 699
Query: 681 SMMTSTQYLFNSYIGKLE--ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ Y+ + Y E C LC R F + K++ ++ I + + +
Sbjct: 700 --LDGADYVMDYYKKGQEIINVNNACRLCARPFADSKEKASALEKIQKELARIAKDSLTE 757
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTAL 798
+ QL + R + YEN L D +IPSL + LE + +K + +
Sbjct: 758 A--VQQLGEDLRVANGARLQYENYKLLSDKEIPSLEKTVQTLESEKATLVAQAEKQDSLV 815
Query: 799 ETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKE 858
++ TA GD L + + + E+ + E+ I+ + S L+ +
Sbjct: 816 -----RDVTAAKEDGD--ALSKTVAAITNYCHEISKYETDIARLSSQQSYSGSTLSNE-- 866
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN------DIHSKQLTVQGG-------- 904
E+N ++ E +LNS +KL S +KQ D QL + G
Sbjct: 867 ---EINQQSNECEEKINKLNSKIDKLVSEEKQAMAMITALDREVSQLNQESGNAKHQLEK 923
Query: 905 ----AGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKK 960
A +K D +L V ELE L + A QL+ E K++
Sbjct: 924 RNRLAAEVKEYRDSTSQLREAIRVADVELESLAPQFAKASAQLD-----------EVKRR 972
Query: 961 LNEEGAKIQ----DYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ------- 1009
E +K+Q + + + I+ I Y + +LAA ++ + Q
Sbjct: 973 GRHEASKLQKDKDSVANTVNKFRAIETAINRYVESNGSGKLAACERAIHAIEQDQKRLEK 1032
Query: 1010 -------RKEDIIAKRGVCE---RTINE-------------INQSIANQSLEEIDLKN-- 1044
+ D+ A+ E RTI E I+ IA+ + +D ++
Sbjct: 1033 EIAVVTKKNNDVNARSNDSENSRRTIEENVRYRKGRKDIEAIHHKIADLESQNVDGEHEQ 1092
Query: 1045 ----------NLTLLEK---------------------------KEAVAKLNE---ELKL 1064
NL++LE K+A K E +L++
Sbjct: 1093 LHAELQYATQNLSILEAKKGPIMGALTAKDQELQRYIAEWEIDYKDAADKYRETHLKLEV 1152
Query: 1065 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHT 1124
++ DL KY L++ +++YH+ KM +IN + + W R Y
Sbjct: 1153 TKAACDDLGKYGSALDSAIMQYHATKMEAINSIATDLWQRTY------------------ 1194
Query: 1125 LENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKK 1184
QG D+D I I +D T + RTYNYRVV K
Sbjct: 1195 ----------------------------QGTDVDGILIRSDAET-VKTNRTYNYRVVMVK 1225
Query: 1185 NGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIV 1244
+E DMR RCSAGQ+VLAC+IIRL +++ VI DE T +D +
Sbjct: 1226 GEVEMDMRGRCSAGQKVLACIIIRLALAECFGQNCGVIALDEP----TTNLDTDNI---- 1277
Query: 1245 RDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
KALA++ N IK Q NFQ+I+ITHDEEF+ + D
Sbjct: 1278 ---KALAQSL--------------NQLIKARRQQSNFQIIIITHDEEFLREMQPSD 1316
>gi|365763466|gb|EHN04994.1| Rad50p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1278
Score = 251 bits (640), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 329/1325 (24%), Positives = 605/1325 (45%), Gaps = 204/1325 (15%)
Query: 36 NGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKD 95
NG GKTTIIEC+K+A T + P S G F+HDP+I +
Sbjct: 2 NGSGKTTIIECLKYATTGDLPPN---------------------SKGGVFIHDPKITGEK 40
Query: 96 ETHAIVKLQCTCENNDTVCVVRSL-LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQ 154
+ A VKL T N + V R++ LL K ++ I +G + L
Sbjct: 41 DIRAQVKLAFTSANGLNMIVTRNIQLLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRS 98
Query: 155 QESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
E ++ +GV KAIL VIFCHQE+S WPL E +K+ FDEIF A K+ KAL+++K
Sbjct: 99 LELDAQVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK 158
Query: 215 IQRDRLRKEIP-EIKAHYQATLNYKKEADSKKQLIYNNTQ---KRDQSFEELHNIEESMK 270
++K++ +IK Q+ + K + D K + N Q K DQ EE+ IE +
Sbjct: 159 ----SIKKDMSVDIKLLKQSVEHLKLDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLN 214
Query: 271 PINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLN 330
I EK +L + ++ + ++ + K + I + L +SI + K +LQ+ L
Sbjct: 215 EITEKSDKLFKSNQDFQKILSKVENLKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLA 273
Query: 331 LFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKK------- 383
F L +K ++L + E S + + N + G+LE +ET++K
Sbjct: 274 NFSKVLMDKNNQLRDLETDISSLKDRQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSS 333
Query: 384 LNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDN 442
L + + K L++ D A+ + + + I T TID++ DI++ E SD
Sbjct: 334 LKEAFQHKFQGLSNIENSDM-AQVNHEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD- 391
Query: 443 ENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKL 502
+++ + ++S Q +E NKKD + +I E+ + + + L T+
Sbjct: 392 -----------LIKSITVDS------QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ- 433
Query: 503 NRVNSEIDQLS------KSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQ------ 550
+ +N E++ L +S + + + ++ I ++N +E+ +++ +I Q
Sbjct: 434 DSLNHELENLKTYKEKLQSWESENIIPKLNQKIEEKN---NEMIILENQIEKFQDRIMKT 490
Query: 551 -AQNITLAEIKSLKNRKESKLADINLLKER--HDRAFHLLFDMIPEENFKNSLDKALSSI 607
Q A++ +K +KL ++ + E+ +D +F + E F+ + D +
Sbjct: 491 NQQADLYAKLGLIKKSINTKLDELQKITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQ 547
Query: 608 TFDINRIQEDINAKEKHLYTLEANVSNS-------SKTLRDQKRTLAELMDRMELVLGSK 660
IN +Q++I K ++ L+ +N+ K L+D +++ +++ +L+ +
Sbjct: 548 KLFIN-MQKNIAINNKKMHELDRRYTNALYNLNTIEKDLQDNQKSKEKVI---QLLSENL 603
Query: 661 P-------FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFES 713
P + D L+ L K E + M +T FN ++ E + C LC+R FE+
Sbjct: 604 PEDCTIDEYNDVLEETELSYKTALENLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFEN 662
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IP 771
+ L+ +LKTK N +KT D + ++ L L+ + ++I+ L + I
Sbjct: 663 ESFKSKLLQELKTKTG-----ANFEKTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKID 717
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS------LQGDLTLLDQNIREL 825
+ + L + +E +K +L +L+ +++ K K++ L+ L T L++ +++L
Sbjct: 718 NSQKCLEKAKEETKTSKSKLDELE--VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDL 775
Query: 826 NTLQRELERQESKISGMRSTGVD-LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
+ + +E I G+ +D++ QQ++ + L R I Q +EK+
Sbjct: 776 ENSSKTIS-EELSIYNTSEDGIQTVDELRDQQRKMNDSLRELRKTISDLQME---KDEKV 831
Query: 885 QSLQKQKNDIHSKQLTVQGGAGML-------KSLEDRKCELEGMDSVYQTELEELGRKVA 937
+ + N I K+LTV L S+ ++ + +DS ++EL ++
Sbjct: 832 RENSRMINLIKEKELTVSEIESSLTQKQNIDDSIRSKRENINDIDS----RVKELEARII 887
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
++ + + AQS LD +K E ++ + + D + ++ + I E++++ +G
Sbjct: 888 SLKNKKDEAQSVLDKVKNERDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----F 943
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEA 1054
L+ ++++L K ++ + + NE+N+ +A+ + EE +LK NL L+E K
Sbjct: 944 DELQTTIKELELNKAQMLELKEQLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQ 1003
Query: 1055 VAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR------------------ 1096
+ + E+ ++ ++ + + E+ ++ +K+ S N
Sbjct: 1004 LQHIESEISRLDVQNAEAERDKYQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTH 1063
Query: 1097 --------LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+ + Y +L+ + D+ Y L++ ++KYH KM+ INR++ E W
Sbjct: 1064 QLRTDYKDIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRILDELW 1123
Query: 1149 TRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
R Y G DID I I +D + + K ++YNYRVV K +E DMR RCSAGQ+VLA +IIR
Sbjct: 1124 KRTYSGTDIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIR 1183
Query: 1209 LFISD---------------------------------------QKNFQLIVITHDEEFI 1229
L +S+ QKNFQLIVITHDE+F+
Sbjct: 1184 LALSETFGANCGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFL 1243
Query: 1230 ENLTA 1234
++ A
Sbjct: 1244 GHMNA 1248
>gi|325088021|gb|EGC41331.1| DNA repair protein RAD50 [Ajellomyces capsulatus H88]
Length = 1298
Score = 251 bits (640), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 323/1362 (23%), Positives = 594/1362 (43%), Gaps = 203/1362 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 9 IDKLSILGVRSFDNSRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN----- 63
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
S G F+HDP++ + E A VKL + + RSL L+
Sbjct: 64 ----------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSVSGARMVATRSLQLTV 107
Query: 124 KNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENS 183
K T + + + G + ++ E M +GVSKAIL++VIFCHQ+ S
Sbjct: 108 KKTTRQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDES 165
Query: 184 SWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADS 243
WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +AD
Sbjct: 166 LWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADR 225
Query: 244 KKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMI 303
++ + E H + + M+ E + ++ + + + + K+ E I
Sbjct: 226 VDEI--------EALRAESHELSQQMRRAAELADKAWKESESYAQILGTLEGKRIEAKSI 277
Query: 304 QESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ---- 359
Q S L+ + ++ D+ L+ L F+ ++ E + LK +Y+ E KQ
Sbjct: 278 QSSITNLQEHLVEVDESDEW-LERTLEQFE---SQQTQYREQEVSLKEKYV-ELKQVIED 332
Query: 360 SHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG--EGL 417
+ T + Q + GK E D K+Q+ + G E L
Sbjct: 333 NRTKLGLKQAEYGKHEND----------------------------KAQFERQLGRREKL 364
Query: 418 IK--MSQTTI---DKYLSDIKILE-----RTFSDNENT---------------KQAEINA 452
IK Q I D L D+++ E R S ++N Q+ +N
Sbjct: 365 IKKIARQNNIRGFDDDLDDMQVNEFMQRIRKLSKDQNQALERARQEAQMELREAQSLLNQ 424
Query: 453 LIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL 512
L K L+ + ++QI N + + +++ ++ + + VL++++ +++
Sbjct: 425 LSQRKSALQEVKNAARKQISSNDIEADSYQRRLDGIDIDEGSKAVLESRIEETERSLNEA 484
Query: 513 SKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLAD 572
+ + I++ + LEDE ++AE+ + LA + LK + +
Sbjct: 485 KEKAKTASWDSTIQSKTAEIRLLEDESSKLNAELIEGTKRAGDLARLDHLKKELKDRERS 544
Query: 573 INLLKERH-DRAFHLLFDMIPEENFKNSLD----KALSSITFDINRIQEDINAKEKHLYT 627
+ ++ H DR L PE N ++LD +AL T + R++ D + + L
Sbjct: 545 LETMEGAHSDRIKKFL---TPEWN-PSTLDQEYQRALQEATNALTRVERDRDGVSRELEH 600
Query: 628 LEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTS 685
E + + K L ++ L + + ++ + +P E D L + ++L +++ +
Sbjct: 601 AEFKLKTTRKDLLQRRNELKQCIQKIRDAVDDEPAEYPDILKQRQVQL-----DMAKKDA 655
Query: 686 TQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTH 741
QY Y+ K + + C +C+R F+++ +NKL +K + ++
Sbjct: 656 DQYAGLGEYLSKCMDAARQKKVCRMCSRPFKTEGEFQIFLNKLDALVKRATQDAVDE--S 713
Query: 742 IDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELE---ENVI-ETKGELKKLKTA 797
+ QL Q + Y+ ++L T+IP+L + +LE E+++ + + K +
Sbjct: 714 MQQLEADLEVAQSVSTFYDTWVRLSSTEIPALEKEESQLESQREDLLSQVEDHDKIVSER 773
Query: 798 LETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQK 857
+E+ K E + ++ ++ D I+ L + + L + + G R T D+ + ++
Sbjct: 774 VESKKNVESLSKTV-ATISKYDSEIKTLRSQIQNLLANQQDVGGTR-TLEDIQEQISAIG 831
Query: 858 EKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRK 915
EK E SK+ E Q+R ++ +L+ + D+ S SL R
Sbjct: 832 EKSREFQKVISKLNNEKDQSRT-----EITALELKLRDVRSSLNNANYQLEKKASLAARV 886
Query: 916 CELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKE---HKKKLNEEGAKIQDYT 972
E +++ + +E+ + + + +++ AQ+ D + +++L +E +++ D
Sbjct: 887 EEYRNLNAKQREAIEQADQDIESLTPEVSKAQALYDDISSRAGARERELQQEASQLSDSL 946
Query: 973 KQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSI 1032
QL EI +Y RG LA + V+ + + ++G + IN I+ +
Sbjct: 947 HQLNLTNE---EITSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKDINAISARL 1003
Query: 1033 ANQSLEEIDLKNNLTLLEKKEAVAKLN---EEL-----KLSEIMISDLTKYHHTLENCVI 1084
+ + +NL + A+ +N EEL ++ + ++ N +
Sbjct: 1004 KDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESERRTREHNALS 1063
Query: 1085 KYHSQKMRSI----NRLIR--EYWTRIY------------QLKLSEIMISDLTKYHHTLE 1126
+ KM + ++L++ W Y +++ ++ + DL +Y L+
Sbjct: 1064 ARQASKMGEMKSKDDQLMQLLADWNTDYKDAAVKFKEAHIKVETTKAAVDDLGRYGSALD 1123
Query: 1127 NCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNG 1186
++KYHS KM INR+I E W + Y+G D+D I I +D ++ R+YNYRV K
Sbjct: 1124 KAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQD 1182
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISD--------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1183 AEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDI 1242
Query: 1214 ------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1243 IKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNER 1284
>gi|410079156|ref|XP_003957159.1| hypothetical protein KAFR_0D03760 [Kazachstania africana CBS 2517]
gi|372463744|emb|CCF58024.1| hypothetical protein KAFR_0D03760 [Kazachstania africana CBS 2517]
Length = 1301
Score = 249 bits (637), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 341/1365 (24%), Positives = 606/1365 (44%), Gaps = 197/1365 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGTPLTLIVGTNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFVHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 121 LSNKNGKDNCATRD---TTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
L K + T + ISR +G + L E ++ +GV KAIL VIF
Sbjct: 100 LLAKKTTNTFKTLEGQLVAISR----SGGRTTLSTRATELDTQVPLYMGVPKAILEYVIF 155
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE+S WPL E +K+ FDEIF A K+ KA++++KI + + +I +K +
Sbjct: 156 CHQEDSLWPLSEPANLKKKFDEIFQAMKFTKAIDNLKIIKKDMAVDIKLLKQSVEHLKVD 215
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
+ + + K+ ++N K + E++ IE + I + +L + ++ + ++ + K
Sbjct: 216 RDRSKNTKRSLHNLEAKYAEYQEDVKAIEVKLNDITRRSDELFKSNQDFQEVLSKSENLK 275
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEE 357
T + L SSI + G K+ELQ L+ F L EK ELE Q + + ++
Sbjct: 276 TLESLTSNEIERLSSSINAINLG-KSELQDLLDNFSNTLHEK--ELEVQRFEEELFAMKD 332
Query: 358 KQSHTHINEAQMKLGKLERDEETHK-KLNDTLKTKLNNLADTLCLDTTAKSQYTPE---E 413
K N + + E + E +K LN KT+L +L + ++Y E E
Sbjct: 333 KSKEFQNNSNSLARRQGELEAELNKYALN---KTRLTDLQSQMS------TRYGFEVSVE 383
Query: 414 GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEG 473
I + +K+ SD+ E T S ++ +++ +I K+ +K
Sbjct: 384 ASNFIDQLKHYKEKFCSDLDRFEETESQKIKDQEEKLSKVIYSDTVQAQKLDYYKADKNK 443
Query: 474 NKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRN 533
+++N+ ++I S+ L+ + L ++++ KS D +K ++ A ++++N
Sbjct: 444 LLDEISNMESEIITSEYSEDDLEKEKKILAETTLKLEEWEKS---DVIK-QMGAQLKEKN 499
Query: 534 E----LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKL-----ADINLLKERHDRAF 584
E E++L I +I Q A++ LK K A +L +++
Sbjct: 500 EQILLAENDLEEIQDKIKKTNQQADLFAKLGLLKKSIAEKSQALENASTSLENNSKAKSW 559
Query: 585 HLLFDMIPEENFKN---SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRD 641
+L+ + + +FK +L K ++ +++ ++ +L TL+ ++ + KT D
Sbjct: 560 NLMSNDDLDIDFKKIYINLQKQIALSNRELHECEKKFTESSYNLTTLQNDLVTNQKTEND 619
Query: 642 QKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL--------FNSY 693
KR L + + LG E D++ E+ E+S T+ + L FN
Sbjct: 620 IKRNLENALPE-DCPLG------EYDKII-----EEAELSYRTALENLKMHQTTLDFNRK 667
Query: 694 IGKLEENEPRCPLCTRFFES-DYSVPGLVN-------KLKTKIKEIPEQTNNKKTHIDQL 745
++ E + C LC R F++ ++ L N K +T +KE+ ++ +K +D L
Sbjct: 668 ALEVAEYDNSCYLCLRSFDTVEFKNEILQNLKAKTEAKFETALKEVVKE---EKEFLDSL 724
Query: 746 CKQQRSLQELKPVYENIMKLQ-DTD-----IPSLRSKLIELEENVIETKG-ELKKLKTAL 798
++ L +E I K++ D+ SLR +L+ +ETK ELK+ + +
Sbjct: 725 RSLEKDFTLLNSSWERINKIKIDSKKAQELTTSLREQLL-----TMETKNNELKEDQVLV 779
Query: 799 ETP-KTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQ 856
E + +T ++L+ +L LD ++ ++ KI G V +D++ Q
Sbjct: 780 EKELRAYVETIITLKKELKQLDAESSQI--------LEQLKIYGSSDGEVFTVDELQQLQ 831
Query: 857 KEKKNELNTFRSKIESGQT----RLNSHNEKLQSLQKQK---NDIHSKQLTVQGGAGMLK 909
K K + L R I Q ++ H+ + +++K+ N++ + Q +K
Sbjct: 832 KNKSDHLRGLRKAINELQMAREGKIRGHSALITTIKKKTMAINEMERSLVRKQNTENNMK 891
Query: 910 SLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQ 969
S +R E+E +E++EL + +E + N ++E ++ + LN+ I
Sbjct: 892 SKRNRIKEIESKLGQLTSEVDELHSQRIFLEQETNNVKAEFNSKMSSKRDTLNKINNDIN 951
Query: 970 DYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN 1029
+ E+ + +L+ R L E Q+++ + ++ N+
Sbjct: 952 TVSSIWNEITQYDESLLSQCTRELERSELELAELNQQIDFKNNEL-----------NDQK 1000
Query: 1030 QSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDL--TKYHHTLENCVIKYH 1087
Q + + + E+ +L N+ LL+ K+ + + ++ +I + KY H +Y
Sbjct: 1001 QKLKDSNNEKRNLSQNIELLDLKKKLNDIKSQINSLDIQNAKAKRDKYQHESSQLRNEYE 1060
Query: 1088 SQKMRSINRL--IREYWTRIYQLKLS----------------------EIMISDLTKYHH 1123
+ RL +++ +I L+L ++ D+ Y
Sbjct: 1061 KLSAENAGRLGEMKQLQNQINSLQLQLRSDFKDVDNKFHKEWVELQTRTLVTDDIDTYSK 1120
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQK 1183
L++ +++YH KM INR+I E W R Y G DID I I +D + + + ++YNYRVV
Sbjct: 1121 ALDSAIMRYHGLKMEDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTVRGKSYNYRVVMY 1180
Query: 1184 KNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------------------ 1213
K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1181 KQDAELDMRGRCSAGQKVLASIIIRLALSETFGINCGVIALDEPTTNLDEENIESLAKSL 1240
Query: 1214 ---------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
QKNFQLIVITHDE+F+ ++ A A + ++ RD +
Sbjct: 1241 NNIIHFRRHQKNFQLIVITHDEKFLSHMGASQFADHFFKVRRDDR 1285
>gi|71005132|ref|XP_757232.1| hypothetical protein UM01085.1 [Ustilago maydis 521]
gi|46096811|gb|EAK82044.1| hypothetical protein UM01085.1 [Ustilago maydis 521]
Length = 1309
Score = 249 bits (636), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 373/1479 (25%), Positives = 629/1479 (42%), Gaps = 334/1479 (22%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I G+R+F +++F PLT+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLDKLAIRGVRSFDDKSINIIQFFHPLTVIVGYNGSGKTTIIECLKYATTGDLPPNTK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ +E A V+L+ N + VR+L
Sbjct: 61 GGA---------------------FVHDPQMATSNEVKAQVRLRFYAANKVRMNCVRNLQ 99
Query: 121 LSNKNGKDNCATRDT-----TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+S K G T T I+ TG + L E E+ L+GVS++IL NV
Sbjct: 100 VSRKKG--GGLTMKTLEGLLQIADDDAKTGKRGTLSTKCSELDDEIPRLLGVSRSILENV 157
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S+WPL E +K+ FD+IF+AT+Y KAL++IK R ++ KA +
Sbjct: 158 IFCHQEDSNWPLSEPASLKKKFDDIFEATRYTKALDNIKSLRKDRTVQLKVDKAALEGLK 217
Query: 236 NYKKEADSKK----QLIYNNTQKRDQSFEELHNIEESMKPI-NEKLVQLTEKERNMSVMS 290
K AD+ K QL + QK + E+L N E +K I N K E R ++S
Sbjct: 218 VDKDRADTIKAKLTQLQADLAQK-EAKLEDL-NDEIRVKTIQNSKFYD--EATRFREIVS 273
Query: 291 TQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLK 350
++ ER + +E+ L++++ + D+ EL + F LD+ +++ + LK
Sbjct: 274 RAETLEEKER-LHKENMEALQATMTPIKDTDE-ELHKRKQEFHSYLDQNQNKIHS---LK 328
Query: 351 SQYIQEEKQSHTHINEAQMKL---GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKS 407
+ ++E + TH + KL G LE ++ H + + + ++ + L +
Sbjct: 329 RRQAEKEDELETHERRHRNKLSEKGGLEAEKRAHLHAKEKREASIKHIGNELDI------ 382
Query: 408 QYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDN-ENTKQA--EINALIVE-----KVE 459
+G G ++ T I + +K R D N +QA E + ++ + E
Sbjct: 383 -----KGFGGDGLTDTQIQAFEHRVKDEVRKLDDELANLRQANSEKDDVLTTVWQNLRAE 437
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQ-STLQVLQTKLNRVNSEIDQLSKSLDP 518
L +K + +Q I+ +K + +E++ + ST + +L+R D LS
Sbjct: 438 LRAKQNAREQLIDSVRKLREKIKRAQDELDGNALSTADIEAAELDR-----DGLSAKATA 492
Query: 519 DQLKNEIE------------AWIRQRNELEDELCVIDAEISILQAQNITLAEIK-SLKNR 565
Q NE E A IR++++L +E +EI++L AE++ SL +
Sbjct: 493 AQ--NEFEEAKYDEQIRKKNAEIREKDDLREERT---SEINLLNRH----AELRASLGFK 543
Query: 566 KESKLADINLLKERHDRAFHLLFDMIPEE----NFKNSLDKALSSITFDINRIQEDINAK 621
KE + A + ++ DR L +++ + +N + +ALS + ++ D +
Sbjct: 544 KEQQTARRDSAQQLFDRNKAALIELVRSDLELPAVENEVTRALSKREKRLEELEADNANR 603
Query: 622 EKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTL---ELKREQE 678
+ L +E+ +S + K L+ ++ A+L ++ +L S F+D + V + E+ ++
Sbjct: 604 NRELQQIESAISFTRKQLKTKQDMAADLQKSVQDIL-SPDFDDAEEAVKICAEEIAAAKD 662
Query: 679 EVSMMTSTQYLFNSYIGKL---EENEPRCPLCTR------------FFESDYSVPGLVNK 723
E + + S +S++ ++ + + C C R + S K
Sbjct: 663 EYASIDS----LDSFLRRVLREAKGKGHCFACNRGVTPGEYEAIEKHVANTLSSGNTAQK 718
Query: 724 LKTKIKEIPEQTNNKKTHIDQLCK--QQRSLQELKPVYENIMKLQDT------------- 768
KT + +I T L K Q++++Q+++ I++LQ T
Sbjct: 719 KKTLMADIDGWTERNAECQTALAKDAQRKAIQDVE-----IVELQKTILSKQVELESAAK 773
Query: 769 -----------------DIPSLR---SKLIELEENVIETKGELKKLKTALETPKTKEKTA 808
D+ +LR S + L + E++KL+ L + + + TA
Sbjct: 774 AAEASSADLTKMRAEVKDLQALRRVGSDIARLLSEANDLDAEVQKLQVNLASTGSTQ-TA 832
Query: 809 LSLQGDLTLLDQNI----RELNTLQRELE-----------------------RQE-SKIS 840
+Q ++ L +I RELN LQ++ E RQE +K S
Sbjct: 833 EQVQAEIDQLTASIKALKRELNVLQQDRETKRTLINSLERDAHRAEVTVITKRQEYAKRS 892
Query: 841 GM------------------RSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNE 882
M +S V+++ + K+EL F++ + L + +
Sbjct: 893 SMEEQLQEMNADLEDHQKRIKSLEVEIEGANGPIRRAKDELEAFKAAASEAENTLRARAD 952
Query: 883 KLQSLQKQKNDIHSK--QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIE 940
+L+ KQ ++++ Q G L+ E+ EL G E++EL KVA ++
Sbjct: 953 RLEGWAKQIRELNAAVNAYIHQRGDQHLEECEEAIQELVGQIQAIHREVKELTDKVAELQ 1012
Query: 941 TQLNLAQS-ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA 999
++N +Q+ E + ++L ++ KI+ +E+ + LE +++ +
Sbjct: 1013 KEVNQSQATERNIADNIRYRQLAKDVEKIE------QEINSLDLEQAQRSRKHFADKYTE 1066
Query: 1000 LRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN 1059
+E +LN + + + + I + LE D + K++ +
Sbjct: 1067 AKEEENRLNGEASHLSGE-------LASLRSQIKGRELELRDEFRGVHQNYKRKLI---- 1115
Query: 1060 EELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLT 1119
E+K SE+ +DL KY LE +++YH+ KM IN +IR W + Y
Sbjct: 1116 -EVKTSEMANNDLEKYAKALETAIMRYHTIKMEEINDIIRYLWQKTY------------- 1161
Query: 1120 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYR 1179
QG DID I I +D G+ R+YNYR
Sbjct: 1162 ---------------------------------QGTDIDTILIKSD-NEGARGNRSYNYR 1187
Query: 1180 VVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAY 1239
V K+ +E DMR RCSAGQ+VLA +IIRL ++ E F N
Sbjct: 1188 VCMVKDTVEMDMRGRCSAGQKVLASIIIRLALA-------------ESFGSN-------- 1226
Query: 1240 VVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------------IKNASDQKNFQLIV 1285
CGI ALDEPTTNLD IK ++ QLIV
Sbjct: 1227 ------------------CGILALDEPTTNLDKDNIEALARSLADLIKERAENSQLQLIV 1268
Query: 1286 ITHDEEFIENLTAID-RAYVVRIVRDHKGLSDIHLRSLL 1323
ITHDEEF+ L D Y R+ R D+H +S++
Sbjct: 1269 ITHDEEFLTLLGQNDVLEYYWRVSR------DVHQKSVI 1301
>gi|326476317|gb|EGE00327.1| DNA repair protein Rad50 [Trichophyton tonsurans CBS 112818]
Length = 1326
Score = 249 bits (635), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 323/1373 (23%), Positives = 602/1373 (43%), Gaps = 225/1373 (16%)
Query: 8 HIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVH 67
H +R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 6 HKAQVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN--------- 56
Query: 68 DPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGK 127
S G F+HDP++ + E A VKL + + V RSL L+ K
Sbjct: 57 ------------SKGGAFIHDPKLCGEKEVFAQVKLAFKATSAAKMVVTRSLQLTVKK-- 102
Query: 128 DNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQE 181
+ T+ ++ T + + L Q M +GVSKA+L++VIFCHQ+
Sbjct: 103 --LTRQQKTLEGQLLMIKEGERTAISSRVAELDQI----MPQYLGVSKAVLDSVIFCHQD 156
Query: 182 NSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEA 241
S WP+ E +K+ FDEIF+A KY KA+++IK LRK+ E A Y+ N+ ++
Sbjct: 157 ESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKA----LRKKQNEELAKYKIMENHARDD 212
Query: 242 DSKKQLIYNNTQKRDQSFEEL----HNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
K + K + E L H + + M+ + + + ++ + + + + K+
Sbjct: 213 KDKADRAEKRSLKLQEEIEALRAESHELSKEMRRVADLADKAWKESESYAEILGALEGKR 272
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER-LKSQYIQE 356
E IQ S N L+ + ++ D+ L+S L F + + +E +NQE LK +Y+
Sbjct: 273 IEAKSIQTSINNLKQHLVEVDESDEW-LRSTLEQF----ESRQAEYQNQEESLKEKYMDL 327
Query: 357 EK---QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEE 413
++ Q+ + Q + GK E D+ + + ++ ++ L D ++ + +
Sbjct: 328 KELIEQNRHKLGLKQTECGKHENDK---AQFDRQVERRVR-----LIKDIARQNNFRGYD 379
Query: 414 GEGLIKMSQTTIDKYLSDIKIL--ERTFSDNENTKQAE---------INALIVEKVELES 462
G+ + I+ ++ I+ L ER + + ++A+ +N L K L+
Sbjct: 380 GD----LDDMEINDFMDRIQKLTKERNQALEKAKREAQSQLKDAQTLLNQLSQRKSALQE 435
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+ K+QI N K+ + +I+E++ + V++ ++ ++ K+L+ ++ K
Sbjct: 436 VKNAAKKQISMNDKEADTIQRRIDEMDVDEGKRAVIEARM-------EETEKNLEREKDK 488
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNI-------TLAEIKSLKNRKESKLADINL 575
+ +W + + EL +++ + S L A+ I LA + LK + + +
Sbjct: 489 AKNASWESDIQKNDTELRLLEEKASKLNAELIQGTKKAGDLARLDHLKKELKDRERSLET 548
Query: 576 LKERH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
+ H DR L+ + + L + + + + + K L L+ + N
Sbjct: 549 MSSAHGDRISKLVDSTWSPSDIEQKYQDVLKEASTLVTTAERERDGTGKELELLDFKLKN 608
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMM--TSTQYL-FN 691
K L+ + ++ +G +P E +K++Q E+ M + QY
Sbjct: 609 VRKNLQQHSADVENAAKKINETIGDEPEE-----YPHTIKQKQTELDMARKDADQYAGLG 663
Query: 692 SYIGK---LEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ 748
Y+ K ++ C C R F+++ + NKLK IK+ ++ + I+
Sbjct: 664 EYLNKCLDAANDKKVCRTCARPFKTESELQIFKNKLKALIKKATDE--DVVAEIEAREAD 721
Query: 749 QRSLQELKPVYENIMKLQDTDIPSLRSK-----------LIELEEN------VIETKGEL 791
+++ + YE ++L TDIP+L+ + L +LEE+ +E+K ++
Sbjct: 722 LENVRGMGTFYETWIRLTGTDIPALKKEQSGLEAEREGILAKLEEHDRIVDQRVESKRDI 781
Query: 792 KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQ 851
+ L + T L+LQ + L E T R LE + +I+ + L +
Sbjct: 782 ESLSKNVATISRYNNEILTLQTQIQDLSAKQEETGT-SRTLEDIQDEITTLGEKTRSLKR 840
Query: 852 VLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSL 911
V ++ +ELN +S+++ G+ L KL+ L+++ ++++ ++ A ++ +
Sbjct: 841 VSSKLT---HELN--QSRVDVGKLEL-----KLRDLRRELDNVN---FELEKKATLVSRV 887
Query: 912 EDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS---ELDALKKEHKKKLNEEGAKI 968
E E +S + +E + + + + AQ+ ++ A ++ +K+L E + +
Sbjct: 888 E----EYRNQNSKQRETIENADNDIEDLIPEFSKAQARYEDISARGEQREKELQLEVSGL 943
Query: 969 QDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEI 1028
D QL+ +I NY +R QL + +Q + + + A++ R +N I
Sbjct: 944 NDSLHQLDLASE---DITNYIEREGPAQLERSKRELQNILDEIKRLEAEQTDLTRELNNI 1000
Query: 1029 NQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHS 1088
+ + + + +NL ++ +A+ +N E I+DL + ++ K S
Sbjct: 1001 STRLKDSESTKRQYSDNLRYRQESKALVNVNRE-------IADLESQNAEVDRSRFKEES 1053
Query: 1089 QK-MRSINRLIREYWTRIYQLK--------------------------------LSEIMI 1115
++ R N L + +++ ++K ++ +
Sbjct: 1054 ERNTREHNALAAKQASKMGEMKSKDDQLMQLLADWNTDYKDAGAKFKEAHIKVETTKAAV 1113
Query: 1116 SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRT 1175
DL +Y L+ ++KYH KM INR+I E W + Y+G D+D I I +D S R+
Sbjct: 1114 EDLGRYGGALDKAIMKYHGLKMEEINRIIGELWQKTYRGTDVDTILIRSD-NESSRGNRS 1172
Query: 1176 YNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------------- 1213
YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1173 YNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDN 1232
Query: 1214 -----------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D Y R+ R+ +
Sbjct: 1233 IRSLAESLHEIIRARQQQANFQLIVITHDEEFLRSMQCGDFCDYYYRVSRNER 1285
>gi|440467842|gb|ELQ37036.1| DNA repair protein RAD50 [Magnaporthe oryzae Y34]
gi|440478587|gb|ELQ59406.1| DNA repair protein RAD50 [Magnaporthe oryzae P131]
Length = 1316
Score = 247 bits (631), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 344/1419 (24%), Positives = 590/1419 (41%), Gaps = 292/1419 (20%)
Query: 10 MGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDP 69
+ IR+F + V F PLTLIVGENG GKTTIIEC+K+A T E P
Sbjct: 10 LSIRSFGPTNAQFVTFNTPLTLIVGENGSGKTTIIECLKYATTGEQPPN----------- 58
Query: 70 RIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDN 129
S G F+HDP++ + A VKL + V RSL ++ K N
Sbjct: 59 ----------SKGGAFLHDPKLAGESVIKAQVKLSFYSTIGQQLVVTRSLQVTQAKKKLN 108
Query: 130 CATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDE 189
T D T+ ++ G +L E + +GV AIL NVIFCHQ++S WPL E
Sbjct: 109 VKTIDGTL--RVETNGEHVSLSKKNAELDEMVPEKMGVPAAILENVIFCHQDDSLWPLSE 166
Query: 190 GKKVKEIFDEIFDATKYNKALESIKIQRDR------------------------------ 219
+K+ FDE+F+A KY KA++++K+ R +
Sbjct: 167 PSVLKKKFDELFEAIKYTKAIDNLKLLRKKHGEQLRIFKNLEETSKQDKEKGERYGKAIK 226
Query: 220 -LRKEIPEIKAHYQATLN----YKKEADSKKQ-----------------LIYNNTQKRDQ 257
L EI E++ Y+ TL+ Y+KE +K+Q L Q D+
Sbjct: 227 VLEAEIAELEKKYKTTLDKMDKYRKEEATKRQEANSFFGIVTDLQNKKVLYEERKQMADE 286
Query: 258 SFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQL 317
E + + +S + + L Q +K + M +T K TE
Sbjct: 287 LLETIERMSDSEEELEAALSQYADKVKQMKDDATGKTAKYTE------------------ 328
Query: 318 FSGDKAELQSKLNLFKINLDEKCSELENQERLKS---QYIQEEKQSH------THINEAQ 368
GD L+ L + + ++ E+ +R S ++E Q H + EAQ
Sbjct: 329 LKGDLGALRKSLQDKLADRGKHVADKEHHDRQVSARLSMVKEAAQQHGIRGFDGDLTEAQ 388
Query: 369 MK-----LGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT 423
+K + KL +++ + D KL D TA+ + + ++
Sbjct: 389 VKSFENRVQKLLDEKKREVAVYDQELEKLKTSHGKAVADLTARRES--------LNRARD 440
Query: 424 TIDKYLSDI----KILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLT 479
+ K +SDI K L+R+ D A+ L +LE++++ ++ ++ D
Sbjct: 441 SAQKRISDIDLRLKGLQRSVGDLHVDDGAKA-VLDSNSTQLETELREAYNALQQSELD-- 497
Query: 480 NVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDEL 539
+E+N++ L LQ + +R+N+E+ Q + L +E +R E E+
Sbjct: 498 ------DEINEANDNLGRLQGEASRLNNELVQCT------HLASERAQLDLRRKEAEN-- 543
Query: 540 CVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNS 599
QN+ L + + K + LA + E + + + D +++ S
Sbjct: 544 ------------QNVYLKSVMATWGDKLAALAGGPVEPETIGKVYQQILD---QQSAAVS 588
Query: 600 LDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGS 659
K+L ++ Q++I + Y + + +KT +D +R + D + + S
Sbjct: 589 AKKSL------VDEAQQEIRQLD---YKVSSAREEVTKTTKDTERAEKAVCDAL---MQS 636
Query: 660 KPFEDELDRVTLELKR---EQEEVSMMTSTQYLFNSYIGKLE------ENEPRCPLCTR- 709
K +D++ V L R QE +S+ + +LF++ E E + +C LC R
Sbjct: 637 KDEDDDVHPVHTYLDRLASLQESLSVAETDLHLFDALAEYYEKAKKKMERDNKCTLCERS 696
Query: 710 FFESD-YSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT 768
F +SD + LV K+ + + ++ N I +L KQ L+ ++ Y+ + +
Sbjct: 697 FGDSDKFFKSKLVQKIVKNLDQTQKEVVN--ADIQRLRKQVDILRAVRTNYDTYQRTK-A 753
Query: 769 DIPSLRSKLIELE---ENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIREL 825
+P L KL +LE E +I + L K +ALE + + S+ + + + ++
Sbjct: 754 QLPPLEEKLQDLESEKEAMIRKQETLDKEMSALEDKRLDTE---SMGKAVRSITDAVAKI 810
Query: 826 NTLQRELER---QESKISGMRST-----------------GVDLDQVLAQQKEKKNELNT 865
++++ER Q+S +RS + L++++A ++ KK+ ++
Sbjct: 811 ADSEKQIERLASQQSSSGNIRSAHEIQEAQVKNSEQTRALSLQLNKLVADRQRKKDLISQ 870
Query: 866 FRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVY 925
Q +L+ N+K++ +KND ++K +E K E + M
Sbjct: 871 LELNKSELQRKLSEFNQKVE----RKND-------------LIKQIESLKTERDQM---- 909
Query: 926 QTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEI 985
Q +E +++ +E L A+S D ++KL + + + + ++K + +I
Sbjct: 910 QETKDEGAKELEDLEQNLFKAESIRDEEVGRAREKLQKATEQKNLVAETVGKLKSLSSDI 969
Query: 986 LNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN 1045
+Y RG AA +++ L Q E + + IN + Q N ++ ++++N
Sbjct: 970 QDYLDRGGPGLAAANDRTIKNLEQSLERMESDITKLTAEINNLRQEADNSDRKKKNIQDN 1029
Query: 1046 LTL---------LEK----------KEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKY 1086
L LEK +E +L+ E + ++ DL+ H L+ +
Sbjct: 1030 LAYNRTLRIVDKLEKEIEALEDRNAQEDWERLDGEANMLKMKFDDLSGKSHVLKGTLETK 1089
Query: 1087 HSQKMRSINRLIREYWTRIYQLKLSEI-------MISDLTKYHHTLENCVIKYHSQKMRS 1139
+++ + ++Y + + + I I D+ Y LE ++ YHS KM
Sbjct: 1090 KAEQASRVAEYQQDYSDARLKFREAHIKVETTKAAIEDMGSYSAALEKAIMSYHSLKMEE 1149
Query: 1140 INRLIREYWTRIYQGNDIDYISIAADV---GTGSEKRRTYNYRVVQKKNGIEQDMRNRCS 1196
+NR+ E W YQG DID I I ++V T S RRTYNYR+ K E DMR RCS
Sbjct: 1150 VNRIADELWRSTYQGTDIDTILIRSEVETSATASTTRRTYNYRLCMVKQDTEMDMRGRCS 1209
Query: 1197 AGQRVLACLIIRLFISD---------------------------------------QKNF 1217
AGQ+VLA +IIRL +++ Q NF
Sbjct: 1210 AGQKVLASIIIRLALAESFGVSCGLIALDEPTTNLDEANIRSLAVSLHNIIQARQAQSNF 1269
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
QLIVITHDE F+ + D VR + T SR
Sbjct: 1270 QLIVITHDEAFLRAMQCSDFCDTFYRVRRDEMQRSTISR 1308
>gi|444517242|gb|ELV11437.1| DNA repair protein RAD50 [Tupaia chinensis]
Length = 977
Score = 247 bits (630), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 227/813 (27%), Positives = 410/813 (50%), Gaps = 122/813 (15%)
Query: 516 LDPDQLKN---EIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLAD 572
LDP LKN EIE + + L++E+ +++ ++ N L + K K K
Sbjct: 158 LDP--LKNRLNEIERNLSKIMRLDNEIKALESRKKQMEKDNNELEQ----KMEKADKDEQ 211
Query: 573 INLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
I +K RH L P K L+ L S + +IN+ ++ + K L + E N
Sbjct: 212 IRKIKSRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNK 268
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
++ S L+ ++ L+ D++ V GS+ FE +L+R+ E+++ ++ +M+ +++
Sbjct: 269 NHISNELKRKEEQLSSYEDKLFDVCGSQDFESDLERLKEEIEKSSKQRAMLAGATAVYSQ 328
Query: 693 YIGKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRS 751
+I +L +EN+ CP+C R F+++ + +++ L++K++ P++ + +T + + K++
Sbjct: 329 FITQLTDENQSCCPVCQRVFQTEADLQEVISDLQSKLRLAPDKLKSTETELKKKEKRRDE 388
Query: 752 LQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSL 811
+ L PV ++I+ L + +IP LR+KL + ++ K E+++ +T L T +E++A
Sbjct: 389 MLGLVPVRQSIIDLGEKEIPELRNKLQNVNRDIQRLKNEIEEQETLLGTIMPEEESAKVC 448
Query: 812 QGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFR 867
D+T++++ EL ++R++ +QE+K+ G+DLD QV +++EK+++L+T
Sbjct: 449 LTDVTIMERFQMELKDVERKIAQQEAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVS 503
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQ 926
SKIE + + E++Q L+ N++ S++L + + LE++ EL + S+Y+
Sbjct: 504 SKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISANLQRRQQLEEQTVELSTEVQSLYR 563
Query: 927 TELEELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLE 984
E+++ +V+P+ET L Q E + L KK K+ ++ K+ D ++++ + +
Sbjct: 564 -EIKDDKEQVSPLETTLQKFQQEKEELINKKNASNKIVQD--KLNDIKEKVKNIHGYMKD 620
Query: 985 ILNYTKRGTL-------TQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSL 1037
I NY + G T+L + + + + KE I + G+ + Q I Q +
Sbjct: 621 IENYIQDGKYDYKKQKETELNKVAAQLSECEKHKEKINKEMGI-------MRQDIDTQKI 673
Query: 1038 EEIDLKNNLTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHH 1077
+E L++NLTL + + + + NE KL E + D K +H
Sbjct: 674 QERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNH 731
Query: 1078 TLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENC 1128
+L K + +++ + +RE R + K E+MI DL Y+ TL+
Sbjct: 732 SLALGRQKGYEEEIMHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQT 791
Query: 1129 VIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKN 1185
++K+HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 792 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKG 851
Query: 1186 GIEQDMRNRCSAGQR-------VLACLIIRLFI--------------------------- 1211
DMR RCSAGQ+ VLA LIIRL +
Sbjct: 852 DTALDMRGRCSAGQKAEGLLFQVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIES 911
Query: 1212 ------------SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL+VITHDE+F+E L
Sbjct: 912 LAHALVEIIKSRSQQRNFQLLVITHDEDFVELL 944
>gi|49256867|gb|AAH73850.1| RAD50 protein, partial [Homo sapiens]
gi|80473913|gb|AAI08283.1| RAD50 protein [Homo sapiens]
Length = 723
Score = 246 bits (627), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 191/743 (25%), Positives = 381/743 (51%), Gaps = 41/743 (5%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQ 734
+++ + +++ L++K++ P++
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDK 711
>gi|353227488|emb|CCA77996.1| probable RAD50-DNA repair protein [Piriformospora indica DSM 11827]
Length = 1235
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 333/1341 (24%), Positives = 584/1341 (43%), Gaps = 227/1341 (16%)
Query: 91 IGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDT------TISRKIFAT 144
+ + E A V+L+ N +T+ V R+L ++ K K T T + ++
Sbjct: 1 MAAEKEVKAQVRLRFKAANGNTMMVTRNLSVTQK--KTTGMTMKTLEAVLTALPKEGEPE 58
Query: 145 GVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDAT 204
G + + + E+ NL+GVSKA+L+NVIFCHQE+S WPL E +K+ FDEIF+A+
Sbjct: 59 GKRHTISTRCADMDAEIPNLLGVSKAVLDNVIFCHQEDSYWPLSEPSILKKKFDEIFEAS 118
Query: 205 KYNKALESIK-IQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYN---NTQKRDQSFE 260
KY KAL++I+ I++DR+ E+ QA K AD + I + +D +
Sbjct: 119 KYTKALDAIRAIRKDRV-VELKLDNERLQAAAREKTHADKLRNRIADLNATVTAKDSEYN 177
Query: 261 ELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSG 320
E+H+ ++ N+ + E+ + +Y+ + +R ++++ E+ ++++L G
Sbjct: 178 EVHDKASALAHQNK---EFYERATQFREIYREYEAAQEKRAYLEKTLKEINENLEKL-DG 233
Query: 321 DKAELQSKLNLF-------KINLDEKCSELENQE-RLKS------------QYIQEEKQS 360
AEL+ + F K+ D K +L ++E RLK +Q EKQ+
Sbjct: 234 TDAELEERRANFDQEVQVRKMTCDRKARDLRDEEERLKDVRRLLGEEQTRLGQLQAEKQA 293
Query: 361 HTH--------INEAQMKLG--KLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ + E K G + D ++ D +T++++L SQ+
Sbjct: 294 YNRNLTRRDNFVRELSGKYGIKGFDSDSLDQRQWLD-FRTRMDDLHRRTL------SQFE 346
Query: 411 PEEGEGLIKMSQ--TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFK 468
+ EG +K ++ I K +DI + QAE +++ E + +K +
Sbjct: 347 AMQAEGRVKDNEYNENIRKLQADIAKI-----------QAERDSMAKLVNERQHAVKDAE 395
Query: 469 QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN--SEIDQLSKSLDPDQLKNEIE 526
QI+ + + E+ Q +Q LQ +L+ N ++++Q S + I
Sbjct: 396 AQIDSIQTKNSEFKGVTGEIEQKMKRIQTLQEELDASNYDAQLEQKSAA---------IH 446
Query: 527 AWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHL 586
R + L DEL S LQ +N T ++ ++ + +I + E FH
Sbjct: 447 DLNRHYDRLNDELAS-----STLQMENRTTLSLR--RDEAQKYELEIQTIFESISGRFHQ 499
Query: 587 LFDMIPE-ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVS---NSSKTLRDQ 642
P+ E+ + +D+++S +I ++ ++N + + +E+ +S + K L D+
Sbjct: 500 AVGRKPQVESIERDIDRSISEKEREIKDLEVEVNGSSRRVAQIESTISTLKSRQKQLEDE 559
Query: 643 KRTLAELMDRMELVLGSKP-FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENE 701
+TL + ++ + G P L +L Q+E++ + +N I K
Sbjct: 560 AKTLDK---KLTSIRGEHPSVNAGLIDAQEQLNLCQDEIAKHIDSSRWYNE-ILKAGRTR 615
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHI-DQLCKQQRSLQELK---P 757
C C R +D + + +K+ ++ K+ + D+L + Q L ++ P
Sbjct: 616 KLCTSCNRPI-TDDEMAAFEQHVSNLLKK---DSSAKRAELEDELTQWQAELSRMQLALP 671
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLT- 816
+ N K++ T+IP L + +L+E + + E L+T K KT SL+ +
Sbjct: 672 LEVNWEKMKKTEIPKLIQEHTKLQETLNDAILEATACTERLDTAKLSLKTLQSLKQQVNN 731
Query: 817 LLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTR 876
++ R LQ+ +E+ +G +T LD++ A EL+T + IE +
Sbjct: 732 IVGATQRRDIALQQVKNLEETLRAG--ATMKSLDEIQA-------ELSTIQQGIERERQM 782
Query: 877 LNS----HNEKLQSLQKQ--KNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELE 930
L S H+ ++ LQ + + I ++L + G LE + + Y E++
Sbjct: 783 LQSDRERHSSSIRILQTELYQLQIRERELRTEIQEGK---------RLEELTATYTEEIK 833
Query: 931 ELGRKVAPIETQLNLAQSELDALKKE-------HKKKLNEEGAKIQDYTKQLEEVKRIKL 983
+ K+ ++ QL A +DAL +E HK ++NE IQ L+ +
Sbjct: 834 KSRMKIKDLDAQLARANEPVDALVREQEKHHSLHKARVNEAQEAIQAIKSDLDRLDLAAG 893
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLK 1043
I Y + L +E+V L + I + + + +A+ SL LK
Sbjct: 894 TIEEYLRNQGPRNLKRCQEAVVDLEEAIRTGIQDIEALRAEVGRLTKEVASSSLTASTLK 953
Query: 1044 NNL----------------TLLEKKEAV--------------AKLNEELKLSEIMISDLT 1073
+NL L+ +EA A ++ + S+ ++ +LT
Sbjct: 954 DNLRARALAREIAQIDARTAALDLEEASRARQQFDEKYNRAKAAEDDAYRQSQRLVGELT 1013
Query: 1074 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
+ L + MR R+Y ++ + K+++++ +DL KY L++ ++KYH
Sbjct: 1014 SLRNQLTGL-----ERDMREYKDASRKYTEQLIKTKMADMVNNDLEKYAKALDSAIMKYH 1068
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
S KM +N +R W R YQG DID I I ++ G RR YNYRVV K+ +E DMR
Sbjct: 1069 SVKMAEVNDTMRYLWNRTYQGTDIDGIKIISEGEGGGSGRRNYNYRVVMVKDQVEMDMRG 1128
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQ++LA +IIRL +SD +
Sbjct: 1129 RCSAGQKMLASIIIRLALSD---------------------------------------S 1149
Query: 1254 FSRNCGIFALDEPTTNLDIKNAS--------------DQKNFQLIVITHDEEFIENL--- 1296
F NCG+ ALDEPT LD+ N Q NFQLI+ITHDE F+ L
Sbjct: 1150 FGANCGVLALDEPTNALDVDNIEALAQSLVDIIRERRTQANFQLIIITHDENFLRKLGEA 1209
Query: 1297 TAIDRAYVVRIVRDHKGLSDI 1317
+ ID Y R+ RD + S +
Sbjct: 1210 SVID--YYWRVSRDGRQKSTV 1228
>gi|390603363|gb|EIN12755.1| hypothetical protein PUNSTDRAFT_97607 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1309
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 356/1448 (24%), Positives = 621/1448 (42%), Gaps = 319/1448 (22%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I GIR+F V++F P+T+IVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MASLDKLAIRGIRSFDDKHIAVIQF-FPVTVIVGANGSGKTTIIECLKYATTGDQPPNTR 59
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKL+ N + VR+L
Sbjct: 60 GGA---------------------FIHDPKMANEKEVKAQVKLRFNAANGVKMLAVRNLS 98
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKN--LGCLQ---QESVLEMCNLIGVSKAILNNV 175
++ K K T T S A +N G + E +E+ +L+GVSKA+L NV
Sbjct: 99 VTMK--KTGGMTMKTLESLLGLAEANPENGKRGVISTKCAEMDVEIPHLLGVSKAVLENV 156
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S WPL E +K+ FD+IF+AT+Y KAL++IK R E+ K ++
Sbjct: 157 IFCHQEDSYWPLAEAATLKKKFDDIFEATRYTKALQAIKDLRKERAAELKTDKERLESLS 216
Query: 236 NYKKEADSKKQLIYNNTQK---RDQSFEELHNIEESMKPINEKLVQLTE--KERNMSVMS 290
K AD K I + + ++ +EE E + IN+K KE M +
Sbjct: 217 REKGHADKLKGRISDLSAAIAGKEIEYEETQAEYERLVIINKKFHDQAHQFKEMYMKIQG 276
Query: 291 TQYQTKKTERDM--IQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER 348
Q + K+ ++ +E+ E+E G EL+ +L F ++ ++ ++ QE
Sbjct: 277 AQERRKRYHEELAAAKENLQEIE--------GTDQELEDRLANFGTHIQQQKNK-RRQEE 327
Query: 349 LKSQYIQEE----KQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTT 404
K Q + EE ++ H + +LG+L E+ + D + + D + D
Sbjct: 328 NKRQDVDEEVVAMRRKHVALIS---ELGELRNQEKLQE---DRIVER-----DQMIRDIA 376
Query: 405 AK-----SQYTPEEGEGLIKMSQTTIDKYLSDIKILE-RTFSDNENTK------------ 446
AK ++P E + ++ ++LS + L+ R ++ EN +
Sbjct: 377 AKYGIKGYDHSPLERDKVL--------EFLSRLGDLQRRQNAETENVQNEARLKSEEYNR 428
Query: 447 -----QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTK 501
+ AL +K + ++I + + + ++ + E+ ++ ++ + +
Sbjct: 429 RSRQMHGALEALKAQKNTIRTQITNLQASVAAAERTVEESHDLSTELKTLEADIEEKKAR 488
Query: 502 LNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKS 561
+ ++ +EI K+ + D+ + A RQ +L ++L +AE++ L Q T A +
Sbjct: 489 IAKIEAEI----KAANYDRKLADHAAKARQTEDLREQL---NAEMTSLSRQADTRARLDL 541
Query: 562 LKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINR----IQED 617
++ ++K ++ + F L + ++ +++++ L ++T + R ++ +
Sbjct: 542 KRSEFKTKSTEVKHSLSTSNPKFRKL---VGKDALADTMERDLDNVTLEKEREHTELEAE 598
Query: 618 INAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQ 677
A + L E +SN ++ ++ + +L R+ L + E D + +K
Sbjct: 599 SQAANRALQQAENLISNLKSQIKAKRDEVKDLNKRVREAL----RDSESDSIAQGIKDAS 654
Query: 678 EEVSMMTSTQYLFNS-YIGKLEEN-------EPRCPLCTRFFESDYSVPGLVNKLKTKIK 729
+E++ + + NS +G+ EN + C C R +D + L+ +IK
Sbjct: 655 DEITYRQES--IGNSDGLGQAYENLLKTGLAKKTCTACNRGL-NDSELKIFEKFLRDRIK 711
Query: 730 -EIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETK 788
PE KT + + + L+E P+ + KL++ DIP+ LE+ + E +
Sbjct: 712 SSSPESIATVKTELAEWQAELDRLRECLPLEVSRDKLKNEDIPA-------LEQQIKEQE 764
Query: 789 GELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER---------QESKI 839
L L E + A + +L+LL Q ++ QRE ER +E +
Sbjct: 765 NLLPALSNTAEQALERLSAAKTELRELSLLKQQANMISRTQRECERLNREVAEIEKELSV 824
Query: 840 SGMRSTGVDL-----------------DQVLAQQKEKKNELNTFRS---------KIESG 873
+G T D+ Q+LA ++++ +LN R+ K E G
Sbjct: 825 TGSTKTADDVQAELDELTLSMRSNAREQQMLATERDR--QLNAERTHEKDLHEMEKREGG 882
Query: 874 QT----RLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTEL 929
++ S N++L+ ++K+ D+ + +V + D K ++ +D ++ +
Sbjct: 883 LRNQILQIESTNQRLEGMRKEIADLTLRSKSVDS------EIADAKAPIDQLDQEFKEQQ 936
Query: 930 EELGRKVAPIE---TQLNLAQSELDA--------LKKEHKKKLNEEGAKIQD-------Y 971
EL K+A + +LN+ +L+ ++++H ++L E +IQ
Sbjct: 937 RELDVKIAQAQQKSQELNIIVDKLNRVGRDIERYVREKHSRRLQEAEEQIQSIESEISRL 996
Query: 972 TKQLEEVKRIKLEILNYTKRGTLTQLAALRES--VQKL---------------------- 1007
T++ E ++ EI G ++A+LRE+ V+KL
Sbjct: 997 TQESENIREAIAEIDKEMNEGG-ARIASLRENLRVRKLARDIKETEQEIKSYDIESAAKA 1055
Query: 1008 -----------NQRKEDIIAKRGVCERTI-NEINQSIANQSLEEIDLKNNLTLLEKKEAV 1055
+R+ D+ K G+ I E++ S A E DLK E K+
Sbjct: 1056 QRQFEDRYSTEKKRETDMQNKAGLSAAHIGGELSSSKAQLKTLERDLK------EYKDVN 1109
Query: 1056 AKLNEEL---KLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSE 1112
K E+L K+S++ SDL KY L+N ++KYHS KM +N ++R W + Y
Sbjct: 1110 KKYTEQLIKVKMSDMANSDLEKYAKALDNAIMKYHSLKMEEVNDIMRHLWNKTY------ 1163
Query: 1113 IMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK 1172
QG DID I I D G+ K
Sbjct: 1164 ----------------------------------------QGTDIDGIKIRYDAEGGASK 1183
Query: 1173 RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEF---- 1228
R+YNYRVV K+ +E DMR RCSAGQ++LA +IIRL +SD ++ DE
Sbjct: 1184 -RSYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRLALSDSFGQNCGILALDEPTNALD 1242
Query: 1229 IENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITH 1288
EN+ A+ A +V I+ + K Q NFQL++ITH
Sbjct: 1243 TENIDAL-AASLVDIINERKT----------------------------QSNFQLVIITH 1273
Query: 1289 DEEFIENL 1296
DE F+ L
Sbjct: 1274 DENFLRKL 1281
>gi|261334825|emb|CBH17819.1| RAD50 DNA repair-like protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1349
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 336/1427 (23%), Positives = 636/1427 (44%), Gaps = 263/1427 (18%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ I G+R+F P ++ R+V F++PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIEISGVRSFDPNPNNRQRIV-FKKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G + K+ +FV+DP++ +++ A ++L T + V+R
Sbjct: 60 GGGTEKS-------------------SFVYDPKVVGENDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
S + K AT D ++ + ATG + + + +++GVS A+L +VIF
Sbjct: 101 SFQATRTRNKTTFATLDNIVAFQDSATGKIISSTYRANDVDRAIPDMLGVSPAVLEHVIF 160
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE+ +WPL K+VK+IFD+IF AT+Y AL+ ++ LR++ E +A + +
Sbjct: 161 CHQEDGNWPLSPPKEVKKIFDDIFAATRYVLALDRLRENNKELRRQQKEHEASLMSLSEH 220
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
+++A +Q+ + T K EE++ I K L + + + ++T +
Sbjct: 221 REQA---RQISADITVK-----------EETVAGIKAKTDALAPQLQELQAIATALDNVE 266
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLF------------KINLDEKCSELEN 345
+ + +E I G+K E S+LN+ + N EK ELE+
Sbjct: 267 HRAEGLSREAAVIEGRI-----GEKRESLSRLNVSPPGYSLGELLQRRQNFGEKLRELES 321
Query: 346 ----QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCL 401
++ L + + E ++ + + + E+ E+ HK+ + LK +++L+ +
Sbjct: 322 TVSTKKELMERAVAELRRCEESVVSLRSGIEFREKQEQQHKRECEELKVIMSDLSMKFVI 381
Query: 402 DTTAKSQYTPEEGEGLIKMSQTTIDKYLS-DIKILERTFSDNENTKQAEINALIVEKVEL 460
D GE + + T I +Y++ ++ E+ S N+ A I A+ +
Sbjct: 382 D-----------GE-INEHCLTKITEYVNEELHNEEQKRSGELNSIDAGIRAVEDRRSTT 429
Query: 461 ESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQ--VLQTKLNRVNSEIDQLSKSLDP 518
+ + ++ E ++ L +++ + + ++ L V T++ V I +L K ++
Sbjct: 430 LRAMDTEGKEKEMKEEQLRHLMKRCGDAKEALGKLAPYVTPTRVKNVQDTITELEKRVEA 489
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIK---SLKNRKESKLADINL 575
+L + +A RQR ++ + ++AQN +A+++ S ++ + A++NL
Sbjct: 490 MELLQKGDARYRQRQDI----------LQSVEAQNKVVAQLRQELSRHKQRSGREAEMNL 539
Query: 576 LKERHDRAFHLLFDMIPEENFKNSLD--------KALSSITFDINRIQEDINAKEKHLYT 627
L+ + ++ + + EE D + L+++T I++++ + LY+
Sbjct: 540 LRTQIAEKEEIINNRLQEELIAGLNDLGCNTGGSQTLTAVTMQIDKLRRKMA---DTLYS 596
Query: 628 LEANVSNSSKTLRDQKRTLAEL------------MDRMELV--LGSKPFEDELDRVTLEL 673
+EA V++ + L K+ ++L R++ + LG+ + + +E
Sbjct: 597 VEAEVNDLDRQLIALKQNRSQLEGKIVSENIELQRKRVQCISKLGNDDALTNFEALLVEA 656
Query: 674 KREQEEVS-MMTSTQYLFNSYIGKLEEN--EPRCPLCTRFFESDYSVPGLVNKLKTKIKE 730
+ +++ ++ ++ L + +E+ E +CPLC R F S+ + + K
Sbjct: 657 RDRYHKLNEKLSGSKALAACHAHFVEQAKVEDKCPLCGRAFGSENELNDFLASFK----- 711
Query: 731 IPEQTNNKKT----HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
+ +QT+ K + +++ ++ R L++L+ ++ +L D + P +LEE++
Sbjct: 712 VGQQTSGKDSIKEGDVEKALQRVRGLEQLESDVMDVRRLAD-NAP-------QLEESLKS 763
Query: 787 TKGELKKLKTALETPKTK-EKTALSLQGDLTLLDQNIRELNTLQRE-------LERQESK 838
T +++ + LE K +K +Q L+ Q E+N + E L R+E+
Sbjct: 764 TIKQIRDKEILLEDVHNKRDKVKDEMQRAQKLV-QAAMEVNAMTSEKQALLQQLNRREAA 822
Query: 839 ISGMRSTGVDLDQVLAQQKEKKNELNT-----FRSKIESGQTRLNSHNEKLQSLQKQKND 893
+ + ++ A + EL + K ES L+ N L +Q+ +
Sbjct: 823 CAEASTPSANIGG--AGEPCCAGELASLSYEELSDKYESANAELHRLNVLLSEMQRGEEG 880
Query: 894 IHS----KQLTVQGGA-GMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIE-------T 941
+ K+LT++ LK R+ E+E S Y + E ++A I+ T
Sbjct: 881 GSAQALVKELTMKRSELCELKMKLTRQAEVEATISQYAEQEEGYVSRIAEIDDQREKLVT 940
Query: 942 QLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEIL----NYTKRGTLTQL 997
QL EL+AL H K+ E A Q Y QL+ + +L +Y +L
Sbjct: 941 QLESYNKELEAL---HAKRKELELASQQGYIGQLKRTLGLLSAVLPRLRDYITSRVGEEL 997
Query: 998 AALRESVQKLNQRKEDIIAKRGVCER-TINEINQSIANQSLEEIDLKNNLTLLEKKEAVA 1056
+ RES+ ++N+++ D A+ R +I++ + I + +++ + LEKK ++
Sbjct: 998 SRDRESL-RVNEKRRDTQAEEVKLLRLSIDDTLRIINEEQRLRVEVDKYIEYLEKKGSIE 1056
Query: 1057 KLNEELK-----LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR------------ 1099
+ + L LSE+ ++ + L V++ S + I LIR
Sbjct: 1057 EDEKRLSDVRCTLSELKVNAVPAAEAVLGKDVVERES--VGRIRELIRGKISALECLRAQ 1114
Query: 1100 -----------------------------EYWTRIYQLKLSEIMISDLTKYHHTLENCVI 1130
Y T +++ +EI +SD+ KY+ LE V
Sbjct: 1115 QDGVAEAMRQDIESLKGQLTRDKYKDIEKRYRTTFLKVQTTEIAVSDVEKYYRALEKAVQ 1174
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYNYRVVQKKNGIEQ 1189
YH +K+ IN+++ + W Y+G+DID I + + D T + RR+Y+YRVV K+ E
Sbjct: 1175 TYHQEKIAQINQILADLWRHTYKGSDIDTIELRSEDDVTSTTARRSYSYRVVMKRGNSEM 1234
Query: 1190 DMRNRCSAGQRVLACLIIRLFISDQ----------------------------------- 1214
DMR RCSAGQ+VLA ++IRL +S+
Sbjct: 1235 DMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNARSLAESLRMLIDS 1294
Query: 1215 ----KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKALAETFS 1255
K+FQLIVITHDE F+ L A+D Y + HK FS
Sbjct: 1295 HRAVKHFQLIVITHDEHFVRALGGQALDTFYYI-----HKDREGAFS 1336
>gi|258573809|ref|XP_002541086.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901352|gb|EEP75753.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1267
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 307/1317 (23%), Positives = 579/1317 (43%), Gaps = 176/1317 (13%)
Query: 37 GCGK-TTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKD 95
G G+ TIIEC+K+A T E P S G F+HDP++ +
Sbjct: 2 GLGRLYTIIECLKYATTGELPPN---------------------SKGGAFIHDPKLCGEK 40
Query: 96 ETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDT--TISRKIFATGVQKNLGCL 153
E A VKL + + V RSL L+ K T + + ++ T + + L
Sbjct: 41 EVLAQVKLAFKATSGARMVVTRSLQLTVKKTTRQQKTLEGQLVMVKEGERTAISSRVAEL 100
Query: 154 QQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
Q M +GVSKAIL+NVIFCHQ+ S WPL E +K+ FDEIF+A KY KA+++I
Sbjct: 101 DQI----MPQYLGVSKAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQKYTKAIDNI 156
Query: 214 KIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPIN 273
K R + +E+ + K Q K +AD ++ + + ++ + E H++ + M+
Sbjct: 157 KALRKKQNEELGKYKIMEQHAKEDKDKADRAEKRLMSLQERIEALRAETHDLSKEMRRAA 216
Query: 274 EKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAE--LQSKLNL 331
E + ++ + + + + K+ E IQ S L+ + L D++E L+S L
Sbjct: 217 ELADKAWKESESYAEVLGALEGKRIEAKSIQTSIENLK---QHLVEVDESEEWLESTLEQ 273
Query: 332 FKINLDEKCSELENQERLKSQYIQEEKQSHTH---INEAQMKLGKLERDEETHKKLNDTL 388
F + +E LK +Y+ ++ T+ + Q + GK E D+ ++ +
Sbjct: 274 FG---SRQADYQRQEEALKEKYVDLKENIETNRRRLGLKQAEYGKHENDKAQFERQVERR 330
Query: 389 KTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNE---NT 445
+ ++A L E E ++++ + D+ + LER + +
Sbjct: 331 GKLIRDIARQNNLRGFEGDLDEMEINEFMLRIQKLYKDRN----QALERAKREAQAELRE 386
Query: 446 KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV 505
Q+ +N L K L+ + ++QI N K+ + ++NE++ + + +LQ+++
Sbjct: 387 AQSLLNQLSQRKSTLQEVKNAARKQISQNDKEADSYQRRLNEIDIDEGKMAILQSRIEET 446
Query: 506 NSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNI-------TLAE 558
S ++Q K +I +W + + EL ++ E + L A+ I LA
Sbjct: 447 ESRLNQAKD-------KAKIASWDKDLHTKNMELRSLEEESASLNAELIEGTKRVGDLAR 499
Query: 559 IKSLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQED 617
+ LK + + + + H DR L+ N + L+ + + + + D
Sbjct: 500 LDHLKKELKDRERSLETMTSAHGDRVSQLVSKTWNPSNIEQEYQSVLNVASTSLTKTERD 559
Query: 618 INAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQ 677
+ + L +E + + ++L+ K+ L ++R+ +P E ++ ++ Q
Sbjct: 560 RDGASRELEYVEVTLKTARRSLQQHKQELDHCVERIREATDEEPAEYP---DVVKQRQTQ 616
Query: 678 EEVSMMTSTQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPE 733
E++ QY Y+ K E + C C+R F++D KL++ +K+
Sbjct: 617 LEMAKKDMDQYAGLGEYLSKCLEAAKQKKVCRTCSRPFKTDKEFQEFKVKLESLVKKATM 676
Query: 734 QTNNKKT-HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELE----------- 781
++++ H+++ + R+ Q Y++ +++ +T IP ++ LE
Sbjct: 677 NADDEEVQHLEENLEFARNAQ---TYYDSWVRISNTTIPETDKEIARLESEREELLAKVE 733
Query: 782 --ENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKI 839
+ ++ KGE K+ +E+ T + ++ L I+EL+ Q++
Sbjct: 734 DYDRIVSEKGESKR---DIESLAKTVATIAKYESEIKTLRSQIQELSAKQQD-------- 782
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSK 897
SG T D+ +LA E+ EL +KI E Q+R ++ L+ Q D+ S+
Sbjct: 783 SGDSRTLEDIQDMLATVGEESRELRRTITKITNEKDQSRA-----EITELELQLRDVRSE 837
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS---ELDALK 954
+ S+E R E +++ + +E+ + + + +++ AQ+ ++ +
Sbjct: 838 LDNAKFQLDKKASIETRLEEYRNLNAKQRESIEKADQDIENLAPEVSKAQAKYEDISSRS 897
Query: 955 KEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDI 1014
++ +++L ++ A + D QLE +I++Y RG QL + ++ + E +
Sbjct: 898 EQKERELQQDVASLSDSLHQLELANE---DIVSYNDRGGPRQLERSKRELENITTEIEQL 954
Query: 1015 IAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTK 1074
+++G R +N ++ + + + +NL + + ++ E++ E +++ +
Sbjct: 955 ESEQGSITRQLNAVSARLKDSENTKRQYSDNLRYRREMRVLGEVKAEIERLEAQNAEVDR 1014
Query: 1075 YHHTLE--------NCVIKYHSQKMRSI----NRLIR-------EYWTRIYQLKLSEI-- 1113
E N + + KM + N L++ +Y ++ K + I
Sbjct: 1015 ARFRQESARRTEEYNHFSAHQASKMGEMKAKDNELMQLLADWNTDYKDAAFKFKETHIKV 1074
Query: 1114 -----MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGT 1168
+ DL +Y L+ ++KYHS KM INR+I E W R Y+G D+D I I +D
Sbjct: 1075 ETTKAAVDDLGRYGGALDKAIMKYHSLKMEEINRIIEELWQRTYRGTDVDTILIRSD-NE 1133
Query: 1169 GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------- 1213
++ R+YNYRVV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1134 NAKGNRSYNYRVVMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPT 1193
Query: 1214 ------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVR 1245
Q NFQLIVITHDEEF+ ++ D + Y R+ R
Sbjct: 1194 TNLDRDNIRSLAESLHDIIRARQQQANFQLIVITHDEEFLRHMHCGDFSDYYYRVSR 1250
>gi|336273776|ref|XP_003351642.1| RAD50 protein [Sordaria macrospora k-hell]
gi|380095921|emb|CCC05968.1| putative RAD50 protein [Sordaria macrospora k-hell]
Length = 1317
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 340/1397 (24%), Positives = 637/1397 (45%), Gaps = 213/1397 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ ++++ I+G+R+F + F PLTLIVG NG GKTTIIEC+K+A T E P S
Sbjct: 1 MSKIEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN-S 59
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP + +G+KD A +KL ++ V R++
Sbjct: 60 KGGAFIHDPNL-------------------VGEKD-VQAQIKLSFRSTVGESFVVTRNVQ 99
Query: 121 LSNKNGKDNCATRDTTI------SRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKA 170
L K T + ++ R++ +T V+E+ L+ GVS A
Sbjct: 100 LVVKKATRTQKTLEGSLLLRSNGDRQLIST------------RVMELDKLVPEKLGVSPA 147
Query: 171 ILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAH 230
+L+ VIFCHQ+ S WP+ +K+ FDEIF+A KY K +E++K+ + + +E+ +K
Sbjct: 148 VLDAVIFCHQDESLWPMSAPADLKKKFDEIFEAQKYAKVIENLKLLKKKKGEELRILKVQ 207
Query: 231 YQATLNYKKEADSKKQLIYNNTQK----RDQSFEELHNIEESMKPINEKLVQLTEKERNM 286
K+ AD + + T++ RD+ E L IE I +K Q R +
Sbjct: 208 EAQDKENKERADRVDRELSKLTREIQEARDKCNELLDQIEHEDVRIKQKWEQANSFLRIV 267
Query: 287 SVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFK-------INLDEK 339
+ + T+ + + ++D I E +E S +G L+ LN ++ + D+K
Sbjct: 268 NELQTKQEKLEYKKDAIAELRERIEES-----TGSDEYLRDALNQYEQTVERMNTDRDQK 322
Query: 340 CSELEN-QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADT 398
++ Q LK+ ++ HT E Q GK + D++ + + + + + A+
Sbjct: 323 VAQFGTLQTELKTARVK-----HTAKAEEQ---GKHQSDKDKYDRQLVSQRQMIQEAAEK 374
Query: 399 LCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKI-LERTFSDNENTKQAEINALIVEK 457
+ Y + + I I K L D K LER DN AE++A
Sbjct: 375 HEI-----RGYDGDLDDQEINAFYERIQKMLQDTKRNLERLQRDN----AAELDAKSAVI 425
Query: 458 VELESKI-------KSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEID 510
ELES+ K+ Q++ ++D+T + +N ++ + VL+T++ + S I
Sbjct: 426 TELESRKASRIRDRKTSSQRVATLQRDITKLQGDLNNLDVDEGAEAVLRTEMKGLESRIK 485
Query: 511 QLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEIS-----ILQAQNITL--AEIKSLK 563
Q D E+++ I+ EL +E+ ++A+ + +++ N+ A+++ K
Sbjct: 486 QAK----ADNKVAELDSQIK---ELNNEVLTLEAQGAKLSRELVECTNLAAERAQLELRK 538
Query: 564 NRKESKLADINLLKERHDRAFHLLF--DMIPEENFKNSLDKALSSITFDINRIQEDINAK 621
N+ + + ++++LK ++ + D I E + KAL ++ ++ +++ ++
Sbjct: 539 NQLKERKGELDILKSTFNQQLTEVIGKDWIS-ETIETDFQKALRRLSDRLSELRKTKDST 597
Query: 622 EKHLYTLEANVSNS----SKTLRDQKRTLAELMDRMEL-----VLGSKPFEDELDRVTLE 672
++ L +E ++ + +K+++++ ++ +E +L D+ E
Sbjct: 598 QQELKQVEFKLTTAREKQTKSVKERDSCKKDVYGAVEKAATKEMLARGVSVDDYAETVAE 657
Query: 673 LKREQEEVSM-MTSTQYLFNSYIGKLEENEPR--CPLCTRFFESDYSVPGLVNKLKTKIK 729
+++E + + M +YL + E E + C LC + ++ + L+ K++ K+
Sbjct: 658 IEKELKIIDTDMELDEYLTEYFTSAKEAAEEKKTCYLCDQSLANEKVMQKLMKKIRKKLD 717
Query: 730 EIPEQTNNKKTHIDQLCKQQR-------SLQELKPVYENIMKLQDTDIPSLRSKLIELEE 782
+ H D+ K+Q +L+ ++ YE +L ++P L ++ L
Sbjct: 718 D---------KHKDEQLKEQAMFRRLLGTLRSVRTKYETYGRLC-KELPGLVEEINTLTS 767
Query: 783 NVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER--QESKIS 840
+L+ + + K A L + + Q ++++ +R++ER Q S I
Sbjct: 768 EKERLVRQLEDQDGTFKAAEEKRNAADGLSKSVLKIAQAVKDIADFERQVERSQQNSSIQ 827
Query: 841 GMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQS----LQKQKNDIHS 896
+ ++ DQ + +L ++K+ T+L + ++L+ L+ +K ++
Sbjct: 828 VRSADEINDDQTACAE-----QLRITQAKL----TKLTAERQRLKDQAAQLEVEKLELKH 878
Query: 897 KQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKE 956
K V K L+D + + + ++++ ++V I+ ++ A++ L+ +K+
Sbjct: 879 KITEVVQQLEHKKRLQDTIKNHKEEQNELRKNMQDIDKEVESIDPEIASARAALEESRKQ 938
Query: 957 HKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIA 1016
+ + + + E+K I EI +Y RG LA+ + ++ L E+ IA
Sbjct: 939 GRAREQRIAEERDGIATTVSELKMINREIQDYLDRGGPANLASNQRAIASL----ENTIA 994
Query: 1017 --KRGVCERT--INEINQSIANQSLEEIDLKNNLTL---LEKKEAVAKLNEELKLSEIMI 1069
+R + E T I+++N+ I N + ++ +NLT L +++A+ + EEL +S
Sbjct: 995 TLERDMKELTTQIHKLNKEIDNSDAKRRNIADNLTYRKNLRERDALEEEIEEL-VSRNAQ 1053
Query: 1070 SD---LTKYHHTLENCVIKYHSQKMRSINRLIR--EYWTRI---YQLKL----------- 1110
D L K H LE+ K ++ + R + + E + R+ Y+++L
Sbjct: 1054 EDYDRLVKEAHYLESRRGKLNADRDRLMGSMSTKDEQFARLNDEYEIELKGARARFKESH 1113
Query: 1111 -----SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD 1165
++ I DL + L+ +++YHS KM INR I E W YQG DID I I +D
Sbjct: 1114 IKVETTKAAIEDLARGMVALDQAIMQYHSLKMEEINRTIGELWQSTYQGTDIDTIQIRSD 1173
Query: 1166 V------GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
+ G RR YNYRV K E DMR RCSAGQ+VLAC+IIRL +++
Sbjct: 1174 MDSSASGGASGNTRRIYNYRVSMIKGDTEMDMRGRCSAGQKVLACIIIRLALAESFGLNC 1233
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQK 1279
+I DE T +D + ++LAE+ + A+ IK Q
Sbjct: 1234 GLIALDEP----TTNLDSDNI-------RSLAES------LHAI--------IKARKSQN 1268
Query: 1280 NFQLIVITHDEEFIENL 1296
N QL+VITHDEEF++++
Sbjct: 1269 NLQLVVITHDEEFLKHM 1285
>gi|345565516|gb|EGX48465.1| hypothetical protein AOL_s00080g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1319
Score = 241 bits (614), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 320/1344 (23%), Positives = 588/1344 (43%), Gaps = 188/1344 (13%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+GIR+F + + F PLTLIVG NG GKTTIIEC+K+A T + P + +G
Sbjct: 10 IDKLAILGIRSFDNTRQETIAFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPNSKNGA 69
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
F+HDP+I + E A VKL N + RSL LS
Sbjct: 70 ---------------------FIHDPKICGEKEVMAQVKLSFVNTNGARMVCTRSLQLSV 108
Query: 124 KNGKDNCATRDTTI------SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
K T D + R +T C++ +S+L N +GVS++IL+NVIF
Sbjct: 109 KKTARTQKTLDGQLLMIKDNQRSTVSTK------CVELDSMLP--NFLGVSRSILDNVIF 160
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPE---IKAHYQAT 234
CHQE S WPL E +K+ FDEIF+A KY KA+++IK R + +EI ++ ++
Sbjct: 161 CHQEESMWPLSEASVLKKKFDEIFEAQKYTKAIDNIKTLRKKQAEEIKRLNLLQDQFKVD 220
Query: 235 LNYKKEADSK-KQL---IYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEK-ERNMSVM 289
+ A+ K KQ+ I N ++R++ E+ I E + E L Q T E++++V+
Sbjct: 221 KERAERAEKKTKQISSEIENLREQREELSREISKIREEI----EVLWQTTASFEKDIAVL 276
Query: 290 STQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERL 349
+ TK+++ I E ++L+ I L D+A L+ +L FK +D+ +++ ++ER
Sbjct: 277 T----TKRSDHQRISELIDDLQDDIDLLPDSDEA-LEDRLANFKDEMDKFEAKITDKERH 331
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCL----DTTA 405
K + +E+ + +N+ + G L+ +E ++ D L + N + + L +A
Sbjct: 332 KIEIKEEQGRLRVKLNKKADQKGTLQARKEHYE---DQLMNRENMIKEASALHEIRGFSA 388
Query: 406 KSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIK 465
+ + + K+ Q T ++ + ER + + + NAL L K+
Sbjct: 389 GDLDDRQVADFMRKLEQLTREQSGT----YERAKREGKEEQLQASNALNT----LNQKLL 440
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV-------NSEIDQLSKSLDP 518
S +Q ++ + +++ + + LQV + ++ R+ NS++ +++ +
Sbjct: 441 SLEQTKRFATTEIDRLNSELRALQKGLDRLQVDEGRITRLEIEVSDGNSKVSEMNTLYEH 500
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE 578
Q +I+ + E+E + E++ A+ + A++ L+ E+K L
Sbjct: 501 QQWDKQIQTKDSEIREVEASIARETKELTKGTAEADSKAKLSILQKEVETKTTAQEALIL 560
Query: 579 RHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKT 638
+ F L E + + L ++++ ++ + + L E+ +
Sbjct: 561 TNTDKFDRLLSKWTIETLDDDYHETLEEREDEVSKAEKLLASSNAELTQAESQLKTQRDL 620
Query: 639 LRDQKRTLAELMDRMELVLGSKPFEDELDRVTL------ELKREQEEVSMMTSTQYLFNS 692
LR + + + + FE+ +D +L+ Q + +M+ + ++
Sbjct: 621 LRQKTQEFERASGLVARAMDRASFEECIDFPAYIKNKEEDLENAQRDRAMVEQIRSFYDK 680
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKL-----KTKIKEIPEQTNNKKTHIDQLCK 747
+ K+ + C +C R + S+ + +L K KI I + N C
Sbjct: 681 AL-KMAREKQCCRMCKRSYADQESLDEFMARLEKDLQKQKIDLIDAEIAN--------CS 731
Query: 748 QQ-RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEK 806
+ + L ++ ++ +L+D D+P L ++L LE+ + K +ET K
Sbjct: 732 EDLKILNSVRLEFDIASRLKDHDVPLLNNELGRLEKKHETLLASYETRKKEVETKKVVRS 791
Query: 807 TALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTG--VDLDQVL----AQQKEKK 860
LSL+ ++ + +++ Q ++ ++ M S+ D+ + L +Q E K
Sbjct: 792 EILSLRNPVSEIQNYAKDIRENQLQITSLTKRLEAMGSSRSVADIQKALQSLNSQAGELK 851
Query: 861 NELNTFRSKIESGQTRLNSHNEKLQSLQKQ----KNDIHSKQLTVQGGAGMLKSLEDRKC 916
+ + S E+ +T L ++Q + Q ++++ KQ + A +S+ R+
Sbjct: 852 QKRDALWSDKEAARTELAVAERQVQEVTNQLISARHELEKKQTQAKRLADCKESIGQREG 911
Query: 917 ELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLE 976
+ + EE R V P + ++E+ +E+++ L K D + L
Sbjct: 912 HIR--------DAEEEARGVQPQIIKAKAREAEVRMKWEENEQTLKRIADKSSDTLRGLH 963
Query: 977 EVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQS 1036
++R I+ Y T+ L L ++L R + + V ER + E+
Sbjct: 964 AIQR---GIVQYESGDTVETLENLVRESRELEGRILGLDERLVVSERELVELRAQRGQAD 1020
Query: 1037 LEEIDLKNNLTLLEKKEAVAKLNEELKLSE------------IMISDLTKYHHTL----- 1079
+ + +N+ L + K + L E++ E + + L + H L
Sbjct: 1021 GFKRSITDNIRLRKNKRELGGLEGEIRELEAKNAEQQRDRFKMDVEKLQRRHDGLVMDRT 1080
Query: 1080 -ENCVIKYHSQKMRSINRLIREYWTRIY---------QLKLSEIMIS--DLTKYHHTLEN 1127
+ IK ++ I ++EY Q++L ++ DL Y L+
Sbjct: 1081 GKGATIKSLDTQLTEI---LKEYEIDFKDAKKNFHEGQIRLQTTTVANEDLGTYQMALDK 1137
Query: 1128 CVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGI 1187
V+KYHS KM +NR+I + W + Y+G D+D I I ++ ++ R YNYRV K
Sbjct: 1138 AVMKYHSLKMEEVNRIIDDLWKKTYKGTDVDTILIRSE-QENAKGNRLYNYRVCMLKQDA 1196
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISD---------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1197 ELDMRGRCSAGQKVLASIIIRLALAECFGTNCGLIALDEPTTNLDRDNSRALAQSLHDII 1256
Query: 1214 -----QKNFQLIVITHDEEFIENL 1232
QKNFQLIVITHDE+F+ ++
Sbjct: 1257 NYRQAQKNFQLIVITHDEDFLRDM 1280
>gi|50291227|ref|XP_448046.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527357|emb|CAG60997.1| unnamed protein product [Candida glabrata]
Length = 1305
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 347/1399 (24%), Positives = 621/1399 (44%), Gaps = 260/1399 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G FVHDP+I + + A VKL T N ++ V R++
Sbjct: 59 -------------------SKGGVFVHDPKITGEKDVRAQVKLAFTSTNGLSMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL+ K ++ I +G + L + + +GV KAIL VIFCH
Sbjct: 100 LLAKKTTTTFKTLEGQLVA--INKSGERTTLSTRSVDLDSHVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KA++++K ++KE+ IK Q+ + +
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKAIDNLKA----IKKEMAVNIKLLTQSVEHLR 213
Query: 239 KEAD---SKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D + K + +K + ++ ++E+ ++ IN L L + +N + ++ +T
Sbjct: 214 IDRDRSRATKMKVKQLNEKINDYQSQVDDVEQELESINGSLDSLFKSNQNFQSVLSRIET 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
L +SI++L K +L++ L F ++++K EL+ +RL+S+ I
Sbjct: 274 LNASISAASTQIERLSNSIEKL-DMPKVDLENLLKNFSESIEQK--ELD-VKRLESK-IA 328
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
++Q + + +L L++ E T KKL + E
Sbjct: 329 SDRQKLENCQKQSNRLM-LQQGELTAKKL----------------------------QNE 359
Query: 416 GLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
+K Q TI + IK + + E Q ++ ++ +K ++ES + ++E K
Sbjct: 360 NTLKSFQDTIRQ----IKDEHKLDLNAEEPPQRNVDHILKKKADMESSVNEAISKLEETK 415
Query: 476 KDLTNVITQI-NEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP------DQLKNEIEAW 528
+L I N +N + L ++ + ++ +++DQ K + +QLK + W
Sbjct: 416 MNLKEKSDSIRNSINLEEQKLSYYESDIKQLATKLDQKQKQISSIPADIEEQLKAKKAVW 475
Query: 529 IRQRNEL-----EDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRA 583
+ EL E+ + I+ +I ++ N L++ + L + E+ L + + E +
Sbjct: 476 SKLSKELQEFEKENNITDINNQI---KSNNEELSKSELLAQQIETDLQNYSKKSELSTKL 532
Query: 584 FHLLFDMIPEENFKNSLDKALSSITF-------DINRIQEDINAKEKHLYTLEANVSNSS 636
L+ +M ++N N + AL + T D+ ++ + H L+ N++ +
Sbjct: 533 SVLIENMDEKQNEINKITTALLNDTMIKEWGLDDVKQLSFEFKT---HYIALQKNIATNL 589
Query: 637 KTLRDQKRTLAEL-----------------MDRMELVLGSKPFED----ELDRVTLELKR 675
K + ++ EL +++ L + S ED + D V LE
Sbjct: 590 KAFNEISKSQTELEYELNTCKGKVNNLQHKKEKLILNINSVLPEDCSIEDYDDVLLET-- 647
Query: 676 EQEEVSMMTSTQYL--------FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTK 727
EVS T+ + L FN ++ N C LC+R FE+ + ++K
Sbjct: 648 ---EVSYKTALENLKMHQTTLEFNRKALEVAINNDCCYLCSRSFEN--------TEFRSK 696
Query: 728 I-KEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRS----------K 776
I KE+ E+T+ K + ++ E + Y N ++L + DI +L S +
Sbjct: 697 ILKELKEKTDTK------FEESLKTTLEDEKEYLNNLRLAEKDIYNLNSISSESKALQDR 750
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE 836
+ +L + + K E+ + T +E K K + + + +++ LQ+E+ E
Sbjct: 751 ISQLSKELDNKKSEVAEANTTIEKLKEKRDHCDNY------IKPKMDKIDYLQKEIYNHE 804
Query: 837 SKISGM----RSTG-----VDLDQVLAQQKEKKNELNTFRSKIESGQTR---LNSHNEKL 884
+ + + RS+ V ++Q+ QK + + RS+IES Q + ++S N L
Sbjct: 805 EEKNSLNDVIRSSAENGDSVTMEQLQDNQKSTRELIWKIRSEIESLQEQRENISSKNNTL 864
Query: 885 QSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLN 944
+ +Q ND ++ D K ++ + + +EEL I+ +N
Sbjct: 865 INQIRQAND----------DVAEIEKQFDMKVTIQEQIANDKKHIEELTNSKESIKLHIN 914
Query: 945 LAQSELDALKKEHKKKLN--EEGAK-----IQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
++ L KE+ +K++ ++ AK Q + + + +V ++ +++ Y L
Sbjct: 915 DLSKSVEMLNKENSEKISTLDKDAKRKKGEFQSFNELVLQVNQLHHQLMQYNTSDE-QHL 973
Query: 998 AALRESVQKLNQRKEDIIAKRGV--CERTINEINQSIANQSLEEIDLKNNLTLLEKKEAV 1055
S+++L KE I K G+ +NE +Q + + + E+ +L N+ L++ KE +
Sbjct: 974 QECERSIKEL--EKEMNILKNGLEADNHVLNEQSQKLYDSTGEKRNLLQNIELIDLKEQL 1031
Query: 1056 AKLNEELKL--SEIMISDLTKYHHTLENCVIKYH-----------------------SQK 1090
+N EL ++ ++ KY +Y +Q+
Sbjct: 1032 LSMNNELSSLNAQNAEAERDKYQQESARLRTQYERLSAQNAGKLGEIRQIQNQIDSLTQQ 1091
Query: 1091 MRSINRLIREYWTRIY-QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
+RS + I + + + + +L+ D+ Y L++ ++KYHS KM INR+I E W
Sbjct: 1092 LRSDYKDIDDKYQKEWVELQTRSFANDDIDTYSKALDSAIMKYHSLKMEDINRIIDELWK 1151
Query: 1150 RIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRL 1209
R Y G DID I I +D + K ++YNYRVV K E DMR RCSAGQ+VLA +IIRL
Sbjct: 1152 RTYTGTDIDTIKICSDEVGSTTKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRL 1211
Query: 1210 FISD---------------------------------------QKNFQLIVITHDEEFIE 1230
+S+ QKNFQLIVITHDE+F+
Sbjct: 1212 ALSETFGINCGVIALDEPTTNLDEENIESLAKSLHNIIEFRKHQKNFQLIVITHDEKFLN 1271
Query: 1231 NLTAIDRA-YVVRIVRDHK 1248
++ A + R+ RD +
Sbjct: 1272 HMNAASFTDHFFRVKRDDR 1290
>gi|157106785|ref|XP_001649480.1| DNA repair protein rad50 [Aedes aegypti]
gi|108868772|gb|EAT32997.1| AAEL014748-PA [Aedes aegypti]
Length = 1051
Score = 240 bits (612), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 247/1028 (24%), Positives = 469/1028 (45%), Gaps = 109/1028 (10%)
Query: 308 NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEA 367
N++ S I+ LF G EL+ ++ FK + K EL E S +EK + I +
Sbjct: 34 NQIRSKIQNLFKGSFHELEIEIQNFKQSKSSKLLELREAESDLSSRKAQEKVLQSKIQDF 93
Query: 368 QMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDK 427
+ + L + L K+ L D L L + + E +K + I
Sbjct: 94 ESRRIHLNTKRGQEQDLCGDRSKKMVALCDRLKLPAVGDFEAGGADVESALKAIKHGIRS 153
Query: 428 YLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINE 487
+ ++ L ++ + ++ Q I+ L +K +LE+ + Q + ++ ++I
Sbjct: 154 EETAVQTLSKSHDEADHKAQKAIDKLREDKTKLEADFRMKGQMVADFVREKAKTQSEIAA 213
Query: 488 VNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ-------RNELEDELC 540
+ +S TL+ ++ +EI++L K + + + +E RQ R EL+ +L
Sbjct: 214 IQRSAETLK-------KIVTEIEKLEKDYENQKSNSNVEGMRRQLAEKKIKREELQAKLD 266
Query: 541 VIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF-DMIPEENFKNS 599
++ +IS L A E+ + + +K + L+ +H LF + N+K +
Sbjct: 267 RVEEQISALDAVAAKATELHLKEQQFNAKELEFKRLRNKHTENLKRLFPSKTIDTNYKRN 326
Query: 600 LDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGS 659
+ + I ++ E + + + +E + + L +R L E +++ V
Sbjct: 327 VQTLYDDLQRQIKQLNESMRKSQATVTEMETTRRSQKRELDRVERELTENKEKIYTVCQG 386
Query: 660 KPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPG 719
PFE+ L ++ ++ + E + S + L+ YI ++E+++ CP+C + + V
Sbjct: 387 NPFEEVLAKLKDKISKNNLEHGELRSAEVLYKKYISRIEDDKC-CPVCHKGMDG-ADVQD 444
Query: 720 LVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIE 779
+ ++L +I+ +PE+ + + K+ L L+P E I K Q +IP L+ +L E
Sbjct: 445 ISSELSDEIRRLPEKIEALERMLKADQKKYDQLLALQPYSERIAK-QTEEIPKLKEQLEE 503
Query: 780 LEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE--RQES 837
E +++ +L++ + ++ P + + S+ GD+++LD+++R+++ +++ +E + E
Sbjct: 504 TERKLVQASSDLEECQMSILEPNSSVQLINSILGDMSILDESVRDIDRMKKGIENLKIEV 563
Query: 838 KISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSK 897
+ T LD + +++ + EL R I++ Q +++ E+L +L ++ N + K
Sbjct: 564 AVKTPEGTTASLDDIKLEREALRGELRVERISIDAMQNKIDEETERLNNLHQRYNQMKEK 623
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEH 957
++ +Q L + ++ EL + Q E++E K+ P++ L + K+ +
Sbjct: 624 KIQLQESVQSLDQKKAKELELGEKIASCQREMDETENKLGPVKQNLITEEKSKAKAKEGN 683
Query: 958 KKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKL-------NQR 1010
+ LN+ A +LEE+KR+ EI+ K L E +QK+ N+
Sbjct: 684 RANLNKAQA-------ELEELKRMDAEIVRLCKELDALSRLNLAEEIQKIKRKLQESNEE 736
Query: 1011 KEDIIAKRGVCERT--INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIM 1068
+ IIA + E+T I+ + + + NQ + E D +N L++ K+ L + L
Sbjct: 737 MKKIIA--AIDEKTYQIDSLKKEVMNQDMIERDYLDNRDLMKLKDETTSLKQGLDALMQS 794
Query: 1069 ISDL---------------------TKYHHTLENCVIKYHSQKMR------SINRLIREY 1101
I D+ TK T + ++ S+ ++ ++ Y
Sbjct: 795 IGDMDAPNVAQERNKLLEQRDAIQSTKSQTTGQIAELENQSKALKKELDRSEFKNAVKNY 854
Query: 1102 WTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
+ + + MISD+ KY + LE ++KYH++KM INR I W IY+GNDIDYI
Sbjct: 855 LKTYSESVVLKKMISDILKYRNALEWALMKYHAEKMEQINRSIYSLWRDIYRGNDIDYIR 914
Query: 1162 IAADVGTG----SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFIS----- 1212
I + + ++KRR Y+YRVVQ KN +E DMR RCSAGQ+VLA LIIR+ ++
Sbjct: 915 IKTEDESKPDKVTDKRRQYHYRVVQAKNDVEIDMRGRCSAGQKVLASLIIRMALAETFSN 974
Query: 1213 ---------------------------------DQKNFQLIVITHDEEFIENLTAIDRAY 1239
+ NF L++ITHDE+F+ L D Y
Sbjct: 975 NCGVMALDEPTTNLDRENIASLCESLRRIVTERENGNFLLVIITHDEDFVTKLEKFDTYY 1034
Query: 1240 VVRIVRDH 1247
R+ RDH
Sbjct: 1035 --RVSRDH 1040
>gi|157109203|ref|XP_001650568.1| DNA repair protein rad50 [Aedes aegypti]
gi|108879084|gb|EAT43309.1| AAEL005245-PA [Aedes aegypti]
Length = 1034
Score = 239 bits (610), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 251/1034 (24%), Positives = 472/1034 (45%), Gaps = 121/1034 (11%)
Query: 308 NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEA 367
N++ S I+ LF G EL+ ++ FK + K EL E S +EK + I +
Sbjct: 17 NQIRSKIQNLFKGSFHELEIEIQNFKQSKSSKLLELREAESDLSSRKAQEKVLQSKIQDF 76
Query: 368 QMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDK 427
+ + L + L K+ L D L L + + E +K + I
Sbjct: 77 ESRRIHLNTKRGQEQDLCGDRSKKMVALCDRLKLPAVGDFEAGGADVESALKAIKHGIRS 136
Query: 428 YLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINE 487
+ ++ L ++ + + Q I+ L +K +LE+ + Q + ++ ++I
Sbjct: 137 EETAVQTLSKSHDEADYKAQKAIDKLREDKTKLEADFRMKGQMVADFVREKAKTQSEIAT 196
Query: 488 VNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ-------RNELEDELC 540
+ +S TL+ ++ +EI++L K + + + +E RQ EL+ +L
Sbjct: 197 IQRSAETLK-------KIVTEIEKLEKDYENQKSNSNVEGMRRQLAEKKIKHEELQAKLD 249
Query: 541 VIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSL 600
++ +IS L A E+ + + +K ++ L+ +H LF P + +
Sbjct: 250 RVEEQISALDAVAAKATELHLKEQQFNAKESEFKRLRNKHTENLKRLF---PSKTIDTNY 306
Query: 601 DKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTL-------AELMDRM 653
+ + ++ D+ R + +N + + +A V+ T R QKR L E +++
Sbjct: 307 KRNVQTLYDDLQRQIKQLN---ESMRKSQATVTEMETTRRSQKRELDRIERELTENKEKI 363
Query: 654 ELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFES 713
V PFE+ L ++ ++ + E + S + L+ YI ++E+++ CP+C + +
Sbjct: 364 YTVCQGNPFEEVLAKLKDKISKNNLEHGELRSAEVLYKKYISRIEDDKC-CPVCHKGMDG 422
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
V + ++L +I+ +PE+ + + K+ L L+P E I K Q +IP L
Sbjct: 423 -ADVQDISSELSDEIRRLPEKIEALERMLKADQKKYDQLLALQPYSERIAK-QTEEIPKL 480
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELE 833
+ +L E E +++ +L++ + ++ P + + S+ GD+++LD+++R+++ +++ +E
Sbjct: 481 KEQLEETERKLVQASSDLEECQMSILEPNSSVQLINSILGDMSILDESVRDIDRMKKGIE 540
Query: 834 --RQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQK 891
+ E + T LD + +++ + EL R I++ Q +++ E+L +L ++
Sbjct: 541 NLKIEVAVKTPEGTTASLDDIKLEREALRGELRVERISIDAMQNKIDEETERLNNLHQRY 600
Query: 892 NDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELD 951
N + K++ +Q L + ++ EL + Q E++E K+ P++ L +
Sbjct: 601 NQMKEKKIQLQESVQSLDQKKAKELELGEKIASCQREMDETENKLGPVKQNLITEEKSKA 660
Query: 952 ALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKL---- 1007
K+E++ LN+ A +LEE+KR+ EI+ K L E +QK+
Sbjct: 661 KAKEENRANLNKAQA-------ELEELKRMDAEIVRLCKELDALSRLNLAEEIQKIKRKL 713
Query: 1008 ---NQRKEDIIAKRGVCERT--INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL 1062
N+ + IIA + E+T I+ + + + NQ + E D +N L++ K+ L + L
Sbjct: 714 QESNEEMKKIIA--AIDEKTYQIDSLKKEVMNQDMIERDYLDNRDLMKLKDETTSLKQGL 771
Query: 1063 KLSEIMISDL---------------------TKYHHTLENCVIKYHSQKMR------SIN 1095
I D+ TK T + ++ S+ ++
Sbjct: 772 DALMQSIGDMDAPNVAQERNKLLEQRDAIQSTKSQTTGQIAELENQSKALKKELDRSEFK 831
Query: 1096 RLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGN 1155
++ Y + + + MISD+ KY + LE ++KYH++KM INR I W IY+GN
Sbjct: 832 NAVKNYLKTYSESVVLKKMISDILKYRNALEWALMKYHAEKMEQINRSIYSLWRDIYRGN 891
Query: 1156 DIDYISIAADVGTG----SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
DIDYI I + + ++KRR Y+YRVVQ KN +E DMR RCSAGQ+VLA LIIR+ +
Sbjct: 892 DIDYIRIKTEDESKPDKVTDKRRQYHYRVVQAKNDVEIDMRGRCSAGQKVLASLIIRMAL 951
Query: 1212 S--------------------------------------DQKNFQLIVITHDEEFIENLT 1233
+ + NF L++ITHDE+F+ L
Sbjct: 952 AETFSNNCGVMALDEPTTNLDRENIASLCESLRRIVTERENGNFLLVIITHDEDFVTKLE 1011
Query: 1234 AIDRAYVVRIVRDH 1247
D Y R+ RDH
Sbjct: 1012 KFDTYY--RVSRDH 1023
>gi|71755961|ref|XP_828895.1| RAD50 DNA repair-like protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834281|gb|EAN79783.1| RAD50 DNA repair-like protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 1349
Score = 239 bits (609), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 332/1424 (23%), Positives = 635/1424 (44%), Gaps = 257/1424 (18%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ I G+R+F P ++ R+V F++PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIEISGVRSFDPNPNNRQRIV-FKKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G + K+ +FV+DP++ +++ A ++L T + V+R
Sbjct: 60 GGGTEKS-------------------SFVYDPKVVGENDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
S + K AT D ++ + ATG + + + +++GVS A+L +VIF
Sbjct: 101 SFQATRTRNKTTFATLDNIVAFQDSATGKIISSTYRANDVDRAIPDMLGVSPAVLEHVIF 160
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE+ +WPL K+VK+IFD+IF AT+Y AL+ ++ LR++ E +A + +
Sbjct: 161 CHQEDGNWPLSPPKEVKKIFDDIFAATRYVLALDRLRENNKELRRQQKEHEASLMSLSEH 220
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKK 297
+++A +Q+ + T K EE++ I K L + + + ++T +
Sbjct: 221 REQA---RQISADITVK-----------EETVAGIKAKTDALAPQLQELQAIATALDNVE 266
Query: 298 TERDMIQESCNELESSIKQLFSGDKAELQSKLNLF------------KINLDEKCSELEN 345
+ + +E I G+K E S+LN+ + N EK ELE+
Sbjct: 267 HRAEGLSREAAVIEGRI-----GEKRESLSRLNVSPPGYSLGELLQRRQNFGEKLRELES 321
Query: 346 ----QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCL 401
++ L + + E ++ + + + E+ E+ HK+ + LK +++L+ +
Sbjct: 322 TVSTKKELMERAVAELRRCEESVVSLRSGIEFREKQEQQHKRECEELKVIMSDLSMKFVI 381
Query: 402 DTTAKSQYTPEEGEGLIKMSQTTIDKYLS-DIKILERTFSDNENTKQAEINALIVEKVEL 460
D GE + + T I +Y++ ++ E+ S N+ A I A+ +
Sbjct: 382 D-----------GE-INEHCLTKITEYVNEELHNEEQKRSGELNSIDAGIRAVEDRRSTT 429
Query: 461 ESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQ--VLQTKLNRVNSEIDQLSKSLDP 518
+ + ++ E ++ L +++ + + ++ L V T+L V I +L K ++
Sbjct: 430 LRAMDTEGKEKEMKEEQLRHLMKRCGDAKEALGKLAPYVTPTRLKNVQDTITELEKRVEA 489
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIK---SLKNRKESKLADINL 575
+L + +A RQR ++ + ++AQN +A+++ S ++ + A++NL
Sbjct: 490 MELLQKGDARYRQRQDI----------LQSVEAQNKVVAQLRQELSRHKQRSGREAEMNL 539
Query: 576 LKERHDRAFHLLFDMIPEENFKNSLD--------KALSSITFDINRIQEDINAKEKHLYT 627
L+ + ++ + + EE D + L+++T I++++ + LY+
Sbjct: 540 LRTQIAEKEEIINNRLQEELIAGLNDLGCNTGGSQTLTTVTMQIDKLRRKMA---DTLYS 596
Query: 628 LEANVSNSSKTLRDQKRTLAEL------------MDRMELV--LGSKPFEDELDRVTLEL 673
+EA ++ + L K+ ++L R++ + LG+ + + +E
Sbjct: 597 VEAEANDLDRQLIALKQNRSQLEGKIVSENIELQRKRVQCISKLGNDDALTNFEALLVEA 656
Query: 674 KREQEEVS-MMTSTQYLFNSYIGKLEEN--EPRCPLCTRFFESDYSVPGLVNKLKTKIKE 730
+ +++ ++ ++ L + +E+ E +CPLC R F S+ + + K
Sbjct: 657 RDRYHKLNEKLSGSKALAACHAHFVEQAKVEDKCPLCGRAFGSENELNDFLASFK----- 711
Query: 731 IPEQTNNKKT----HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
+ +QT+ K + +++ ++ R L++L+ ++ +L D + P +LEE++
Sbjct: 712 VGQQTSGKDSIKEGDVEKALQRVRGLEQLESDVMDVRRLAD-NAP-------QLEESLKS 763
Query: 787 TKGELKKLKTALETPKTK-EKTALSLQGDLTLLDQNIRELNTLQRE-------LERQESK 838
T +++ + LE K +K +Q L+ Q E+N + E L R+E+
Sbjct: 764 TIKQIRDKEILLEDVHNKRDKVKDEMQRAQKLV-QAAMEVNAMTSEKQALLQQLNRREAA 822
Query: 839 ISGMRSTGVDLDQVLAQQKEKKNELNT-----FRSKIESGQTRLNSHNEKLQSLQKQKND 893
+ ++ ++ A + EL + K ES L+ N L +Q+ +
Sbjct: 823 CAEASTSSANIGG--AGEPCCAGELASLSYEELSDKYESANAELHRLNVLLSEMQRGEEG 880
Query: 894 IHS----KQLTVQGGA-GMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
+ K+LT++ LK R+ E+E + Y + E ++A I+ Q +
Sbjct: 881 GSAQALVKELTMKRSELCELKMKLTRQAEVEATIAQYAEQEEGYVSRIAEIDDQREKLVA 940
Query: 949 ELDALKKE----HKKKLNEEGAKIQDYTKQLEEVKRIKLEIL----NYTKRGTLTQLAAL 1000
+L++ KE H K+ E A Q Y QL+ + +L +Y +L+
Sbjct: 941 QLESYNKELEALHAKRKELELASQQGYIGQLKRTLGLLSAVLPRLRDYITSRVGEELSRD 1000
Query: 1001 RESVQKLNQRKEDIIAKRGVCER-TINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN 1059
RES+ +N+++ D A+ R +I++ + I + +++ + LEKK ++ +
Sbjct: 1001 RESL-CVNEKRRDTQAEEVKLLRLSIDDTLRIINEEQRLRVEVDKYIEYLEKKGSIEEDE 1059
Query: 1060 EELK-----LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR--------------- 1099
+ L LSE+ ++ + L V++ S + I LIR
Sbjct: 1060 KRLSDVRCTLSELKVNAVPAAEAVLGKDVVERES--VGRIRELIRGKISALECLRAQQDG 1117
Query: 1100 --------------------------EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
Y T +++ +EI +SD+ KY+ LE V YH
Sbjct: 1118 VAEAMRQDIESLKGQLTRDKYKDIEKRYRTTFLKVQTTEIAVSDVEKYYRALEKAVQTYH 1177
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYNYRVVQKKNGIEQDMR 1192
+K+ IN+++ + W Y+G+DID I + + D T + RR+Y+YRVV K+ E DMR
Sbjct: 1178 QEKIAQINQILADLWRHTYKGSDIDTIELRSEDDVTSTTARRSYSYRVVMKRGNSEMDMR 1237
Query: 1193 NRCSAGQRVLACLIIRLFISDQ-------------------------------------- 1214
RCSAGQ+VLA ++IRL +S+
Sbjct: 1238 GRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNARSLAESLRMLIDSHRA 1297
Query: 1215 -KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKALAETFS 1255
K+FQLIVITHDE F+ L A+D Y + HK FS
Sbjct: 1298 VKHFQLIVITHDEHFVRALGGQALDTFYYI-----HKDREGAFS 1336
>gi|342185934|emb|CCC95419.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1346
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 336/1434 (23%), Positives = 620/1434 (43%), Gaps = 280/1434 (19%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ + G+R+F P ++ R+ F++PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIELSGVRSFDPNPNNRQRIT-FKKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G+ K+ +FV+DP++ + + A ++L T + V+R
Sbjct: 60 GSGIEKS-------------------SFVYDPKVAGEGDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
S K + T D ++ + ATG + + + +++GV+ A+L +VIF
Sbjct: 101 SFQAVRARNKTSFTTLDNIVAFQDAATGKVVSSTYRSNDVDRAIPDMLGVTPAVLEHVIF 160
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE +WPL K+VK+IFD+IF AT+Y AL+ ++ LR++ E +A A +
Sbjct: 161 CHQEEGNWPLSTPKEVKKIFDDIFAATRYVLALDRLRENNKELRRQQKEHEATLAALSEH 220
Query: 238 KKEA-------DSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMS 290
+++A +K+ + N ++R++ +L I+ ++ +NE + R +++
Sbjct: 221 REQARQLLADIAAKESTLEANVERRNELVPKLEEIQAVIRDLNEVEQKAESLSREAAIIE 280
Query: 291 TQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLK 350
+ KK ES L+ + + K EL + F L + EL +++ L
Sbjct: 281 GRIGEKK-------ESLVRLDVGV---ITHTKEELLQRQENFDNKLKKLEEELVSKKDLL 330
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
SQ ++ ++ + + E+ E+ H K + L L + +D
Sbjct: 331 SQAEASVRKHEENVVSLRSVIAFREQQEQQHMKDCEQLAQVLKGVTSKFTVD-------- 382
Query: 411 PEEGEGLIKMSQTTIDKYLSD-IKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQ 469
E + + S + I Y+SD ++ E+ ++D ++ + +++A+ E+ I + +
Sbjct: 383 ----ENMNEESLSRIMDYVSDELREAEKEYNDLVHSIEGKVSAIEKEQSAAFRSIDADNK 438
Query: 470 QIEGNKKDLTNVITQINEVNQSQSTLQ--VLQTKLNRVNSEIDQLSKSLDP-DQLKNEIE 526
+ E ++ L V+ + E + L+ V Q +L + +I +L + + +QL+
Sbjct: 439 EKEMKEEQLRLVLKRRTEAEGALKQLEPHVTQAQLAGLQEKITELEQRAEAMEQLRKSNS 498
Query: 527 AWIRQRNELEDELCVIDAEISILQAQNITLAEIK---SLKNRKESKLADINLLK------ 577
+ +RN L+ +AQN +AE++ + N + + A++NLL+
Sbjct: 499 DYEERRNILQK-----------FEAQNKIVAELRQQLARHNERSCREAEMNLLRTQISEK 547
Query: 578 -ERHDRAFHLLFDMIPEENFKNSL--DKALSSITFDINRIQEDINAKEKHLYTLEANVSN 634
ER D+ + E F + + +L+ +T + +++ + K L +EA +
Sbjct: 548 QERVDKGLRETL-IAGLEAFGHDVVESSSLTHVTMQVEKLR---DKKADALRNIEAEANE 603
Query: 635 SSKTLRDQKRTLAELMDRMELVLGSKPFE--DELDRVTLELKREQEE-VSMMTSTQYL-- 689
+DR +VL + + DEL R ++ELKR++ +S + S + L
Sbjct: 604 ---------------LDRQLVVLQQRQSQVADELKRESIELKRKRSHCISRLGSAEALDS 648
Query: 690 FNSYIGKLEE---------------------------NEPRCPLCTRFFESDYSVPGLVN 722
F + K E + +CPLC F D ++ ++
Sbjct: 649 FEAAFIKAREAHHSMSHEQSASRAMAACYSHFVEKAKADGKCPLCDHNFTDDAALNNFLD 708
Query: 723 KLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEE 782
+K K + QTN + ++ + R +EL+ +I +L IP + L + E
Sbjct: 709 TIKVKQQ---TQTNTTEKDVEDAQGRVRMFEELEADVVSIRRL-TARIPQIEESLSTVTE 764
Query: 783 NVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGM 842
+ + L+ + + + K +L T ++ E + L+++L+R+E
Sbjct: 765 EINIKRALLEDVNGRRSGVEDQLKRVQNLMQAATDINGLASEKHFLKQQLQRRE------ 818
Query: 843 RSTGVDLDQVLAQQKEKKNELNT---------FRSKIESGQTRLNSHNEKLQSLQKQKND 893
+ V++D A+ E + ++ E L+ N L L +++N
Sbjct: 819 -AANVEMDAASAKHAEMGENGGSGVCAPTYEQLSAQCEEANAELHRLNVLLNELHRRQNG 877
Query: 894 IHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELE------------ELGRKVAPIET 941
S Q+ + G L CEL+ M Q+ELE +GR VA I+
Sbjct: 878 -ESDQVLI----GELTKRRSELCELK-MKFTRQSELEWAIAQCIEEENTYVGR-VADIDA 930
Query: 942 QLNLAQSELDALKKE----HKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL 997
+ A L L E HKK+ E + Q Y QL+ ++ I+ L
Sbjct: 931 KNEKATEVLKGLSAELEVLHKKREELEMSLNQGYVGQLKATAQLVSNIVP-----KLRDY 985
Query: 998 AALRESVQKLNQRKEDIIAKRGVCERTINEIN--QSIANQSLEEID--------LKNNLT 1047
A R + ++L++ + + C +NEI +S ++ L ++ L +
Sbjct: 986 FACR-AAEQLSEARASLHDGEASCAAAVNEITSLRSAIDELLRGMEEERRMQSQLSKQIE 1044
Query: 1048 LLEKKEAV----AKLNE------ELKLSEIMISDLTKYHHTLE----------------- 1080
LEK++A+ A+L+E +LKL + ++ +E
Sbjct: 1045 YLEKQKAIEEDEARLSELVQVITKLKLKGVPGAEAILGRDVVEREGIARIRELIRARGGE 1104
Query: 1081 --------NCVIKYHSQKMRSIN-RLIRE--------YWTRIYQLKLSEIMISDLTKYHH 1123
+ V++ Q++ + +L RE Y T + + ++I ++D+ KY+
Sbjct: 1105 LERLGAQQDGVMEAMRQEITGLKAQLAREKFKDVEKRYRTTFLKAQTTDIAVADVEKYYR 1164
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYNYRVVQ 1182
LE V YH +K+ IN+++ + W + Y+G+DID I + + D T + RR+Y+YRVV
Sbjct: 1165 ALEKAVQTYHQEKIAQINQILADLWRQTYKGSDIDTIELRSEDDVTSTTVRRSYSYRVVM 1224
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ---------------------------- 1214
K+ E DMR RCSAGQRVLA ++IRL +S+
Sbjct: 1225 KRGNGEMDMRGRCSAGQRVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNARSLAES 1284
Query: 1215 -----------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKALAETFS 1255
K+FQLIVITHDE F+ L A+D Y + HK FS
Sbjct: 1285 LRMLIDNHRTVKHFQLIVITHDEHFVRALGGQALDTFYYI-----HKDREGAFS 1333
>gi|327294469|ref|XP_003231930.1| DNA repair protein Rad50 [Trichophyton rubrum CBS 118892]
gi|326465875|gb|EGD91328.1| DNA repair protein Rad50 [Trichophyton rubrum CBS 118892]
Length = 1279
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 313/1353 (23%), Positives = 595/1353 (43%), Gaps = 221/1353 (16%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 10 VRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN------------- 56
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
S G F+HDP++ + E A VKL + + V RSL L+ K
Sbjct: 57 --------SKGGAFIHDPKLCGEKEVFAQVKLAFKATSAAKMVVTRSLQLTVKK----LT 104
Query: 132 TRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSW 185
+ T+ ++ T + + L Q M +GVSKA+L++VIFCHQ+ S W
Sbjct: 105 RQQKTLEGQLLMIKEGERTAISSRVAELDQI----MPQYLGVSKAVLDSVIFCHQDESLW 160
Query: 186 PLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKK 245
P+ E +K+ FDEIF+A KY KA+++IK LRK+ E A Y+ N+ ++ K
Sbjct: 161 PMSEPSVLKKKFDEIFEALKYTKAIDNIKA----LRKKQNEELAKYKIMENHARDDKDKA 216
Query: 246 QLIYNNTQKRDQSFEEL----HNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERD 301
+ K + E L H + + M+ + + + ++ + + + + K+ E
Sbjct: 217 DRAEKRSLKLQEEIEALRAESHELSKEMRRVADLADKAWKESESYAEILGALEGKRIEAK 276
Query: 302 MIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER-LKSQYIQEEKQS 360
IQ S N L+ + ++ D+ L+S L F + + +E +NQE LK +Y+ ++
Sbjct: 277 SIQ-SINNLKQHLVEVDESDEW-LRSTLEQF----ESRQAEYQNQEESLKEKYMDLKE-- 328
Query: 361 HTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADT---LCLDTTAKSQYTPEEGEGL 417
I + + KLG ++T + N+ K + + + L D ++ + + +
Sbjct: 329 --LIEQNRHKLGL----KQTERGKNENDKAQFDRQVERRVRLIKDIARQNNFRGYDCD-- 380
Query: 418 IKMSQTTIDKYLSDIK--------ILERTFSDNEN---TKQAEINALIVEKVELESKIKS 466
+ + I+ ++ ++ LE+ +++N Q +N L K L+ S
Sbjct: 381 --LDEIEINDFMDRVQRLTKERNQALEKAKRESQNQLKDAQTLLNQLSQRKSALQEVKNS 438
Query: 467 FKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIE 526
K+QI N K+ + +I+E++ + V++ ++ ++ K+L+ ++ K +
Sbjct: 439 AKKQISMNDKEADAIQRRIDEIDVDEGKRAVIEARM-------EETEKNLEKEKDKAKNA 491
Query: 527 AWIR--QRNE-----LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKER 579
+W Q+N+ LE++ C ++AE+ + LA + LK + + + +
Sbjct: 492 SWESDIQKNDTELRLLEEKSCKLNAELIQGTKKAGDLARLDHLKKELKDRERSLETMSSA 551
Query: 580 H-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKT 638
H DR L+ N + L + + + + + K L ++ + N K
Sbjct: 552 HGDRISKLVDSSWSPSNIEQRYQDVLKEASTLVTTAERERDGTGKELELIDFKLKNVRKN 611
Query: 639 LRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLE 698
L+ + ++ +G +P E +K++Q E+ M + Y G L
Sbjct: 612 LQQHSADVQNAAKKINETIGDEPEE-----YPHTVKQKQTELDMARKD---ADHYAG-LG 662
Query: 699 ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV 758
E +C + +K K +++ + ++ ++ +++ +
Sbjct: 663 EYLNKC------------LDAANDKKKATDEDVVAEIEAREADLE-------NVRGVGTF 703
Query: 759 YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKT---ALETPKTKEKTALSLQGDL 815
YE ++L TDIP+L+ + LE E +G L KL+ ++ ++ SL ++
Sbjct: 704 YETWIRLAGTDIPALKKEQSGLE---TEREGVLAKLEEHDRIVDQRVESKRDIESLSKNV 760
Query: 816 TLLDQNIRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--E 871
+ + E+ TLQ +++ +K +G T D+ +A E+ L SK+ E
Sbjct: 761 ATISRYNNEILTLQTQIQDLSAKQEETGTSRTLEDIQDEIATLGEQSRSLKRISSKLTHE 820
Query: 872 SGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE 931
Q+R+++ +L+ L+ + ++ + ++ A ++ +E E +S + +E
Sbjct: 821 LNQSRVDAGKLELK-LRDLRRELDNVNFELEKKATLVSRVE----EYRNQNSKQRETIEN 875
Query: 932 LGRKVAPIETQLNLAQS---ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY 988
+ ++ +++ AQ+ ++ A ++ +K+L +E + + D QL+ +I NY
Sbjct: 876 ADNDIEGLDPEVSKAQARYEDISARGEQREKELQQEISGLNDSLHQLDLASE---DITNY 932
Query: 989 TKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
+RG QL + +Q + + + A++ R +N I+ + + + +NL
Sbjct: 933 IERGGPAQLERSKRELQDILDEIKSLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLRY 992
Query: 1049 LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK-MRSINRLIREYWTRIYQ 1107
++ +A+ +N E I+DL + ++ K S++ R N L + +++ +
Sbjct: 993 RQESKALINVNRE-------IADLESQNAEVDRSRFKEESERNTREHNALAAKQASKMGE 1045
Query: 1108 LK--------------------------------LSEIMISDLTKYHHTLENCVIKYHSQ 1135
+K ++ + DL +Y L+ ++KYH
Sbjct: 1046 MKSKDDQLMQLLADWNTDYKDAGAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHGL 1105
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRC 1195
KM INR+I E W + Y+G D+D I I +D + R+YNYRV K E DMR RC
Sbjct: 1106 KMEEINRIIGELWQKTYRGTDVDTILIRSD-NESARGNRSYNYRVCMVKQDAEMDMRGRC 1164
Query: 1196 SAGQRVLACLIIRLFISD---------------------------------------QKN 1216
SAGQ+VLA +IIRL +++ Q N
Sbjct: 1165 SAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQAN 1224
Query: 1217 FQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
FQLIVITHDEEF+ ++ D Y R+ R+ +
Sbjct: 1225 FQLIVITHDEEFLRSMQCGDFCDYYYRVSRNER 1257
>gi|359477881|ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
vinifera]
Length = 1316
Score = 238 bits (606), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 346/1424 (24%), Positives = 614/1424 (43%), Gaps = 273/1424 (19%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F+HDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHSFIHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKA+L NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q++++WPL + +K+ FD+IF AT+Y KALE IK +EI K + L K
Sbjct: 160 QDDANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLE-NLQILK 218
Query: 240 EADSKKQLIYNNTQKRDQSFE-ELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
+A K + Q++ +S + ++ +E +++ ++ K+ +++ + Q TK
Sbjct: 219 DAAYKLRESIEQDQEKTESLKIQMQELENNIQNVDAKIQHTEATLKDLRKLQDQISTKTA 278
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ-ERLKSQYIQEE 357
ER + + + +++ + + + +LN +K +E+ + LE++ +L+ + E
Sbjct: 279 ERSTLFKEQQKQYAALAE----ENEDTDEELNEWKTKFEERIALLESKISKLEREMDDTE 334
Query: 358 KQSH---THINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ IN+ ++ KL+ + E H L + + + L L + ++ E
Sbjct: 335 TKGSFLKQTINDYIWEISKLQTEAEVHSSLKNERDSTIQKLFARNNLGSLPSVPFSNE-- 392
Query: 415 EGLIKMSQTT-IDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEG 473
I ++ T I L D LE+ D + + + E+ ++ K + Q +
Sbjct: 393 ---IALNFTNRIKTRLMD---LEKDLQDKKKSIEMELKVAWDRYMDANDHWKDIEAQKQA 446
Query: 474 NKKDLTNVITQINEVNQSQST--LQVLQTKLNRVNSEIDQLSKSL------DPDQL-KNE 524
+ + ++ +I E + + LQ+ L S ID+ K+L +QL + E
Sbjct: 447 KVEIKSGILKRIEEKENERDSFELQISNVSL----SHIDEREKNLRIEVERKTNQLAERE 502
Query: 525 IEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAF 584
E+ IRQ+ + EL I+ +I L + +A + + K ++ K++H +
Sbjct: 503 FESNIRQK---QSELYSIEQKIKALNREKDIMAVDSEDRVKLSLKKGELENHKKKHQKIM 559
Query: 585 HLLFDMI---------PEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA----- 630
D I P+++ K + +AL ++ + + + EK + L+
Sbjct: 560 DEYKDRIRGVLKGRLPPDKDLKKEITQALRALGIEFDDMNSKSREAEKEVNMLQMKIEEV 619
Query: 631 --NVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEV-----SMM 683
N+S +K + +KR + + L + F E +L +E+ +V ++
Sbjct: 620 NNNLSKLNKDMDSRKRFIESKLQS----LDQQSFSIESYMKAFDLAKEKRDVQKSKYNIA 675
Query: 684 TSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHID 743
+ +F+ + ++ CP C R F ++ V K + K E H+
Sbjct: 676 DGMKQMFDPF-ERVARAHHVCPCCERPFSAEEE-DEFVKKQRVKAASSAE-------HMK 726
Query: 744 QLCKQQRS-------LQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKT 796
L + S L +L+ VYE +K IP L EL E + + L +
Sbjct: 727 VLAVESSSAESLFLQLDKLRMVYEEYVKXGKETIPLAEKNLNELTEELDQKSQALDDVLG 786
Query: 797 ALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV--------- 847
L KT + + +L + D+ +E+ T Q++++ E K+ R GV
Sbjct: 787 VLAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEYKLD-FRGQGVRSMEEIQLE 845
Query: 848 -------------DLDQVLAQQKEKKNELN-------TFR-SKIESGQT--RLNSHNEKL 884
DL+++ +Q+ +N+L+ T R K+++ T + E+L
Sbjct: 846 LNTLQNTKDNLHNDLEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKKAEEEL 905
Query: 885 QSLQKQKN--DIHSKQLTVQGGA------GMLKSLEDRKCELE-------GMDSVYQTEL 929
L ++K+ D+H K L G +L D K +L+ YQ E+
Sbjct: 906 DRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQAEQKRNYQQEV 965
Query: 930 EEL---------------GRKVAPIETQLNLAQSEL---DALKKEHKKKLNEEGAKIQDY 971
E L G ++ ++ + +L++S+L DA K+E +LN K +D
Sbjct: 966 EALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDARKQEILTELN----KSKDL 1021
Query: 972 TKQLEEVKRIKLEILNYTKRGT------------------LTQLAALRESVQKLNQRKED 1013
+ +++KR + LNY K + ++A+ + KL+Q +E
Sbjct: 1022 MRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLEDRILKIGGVSAVEVDLGKLSQERER 1081
Query: 1014 IIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLT 1073
++++ C T + + QS N S +IDLK K +L +LK +E+ DL
Sbjct: 1082 LLSELNRCHGTTS-VYQS--NISKHKIDLKQTQYKDIDKRYCDQLI-QLKTTEMANKDLD 1137
Query: 1074 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
+Y++ L+ ++++H+ KM IN++IRE W + Y
Sbjct: 1138 RYYNALDKALMRFHTMKMEEINKIIRELWQQTY--------------------------- 1170
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMR 1192
+G DID I I +D G G+ R+Y+Y+V+ + E +MR
Sbjct: 1171 -------------------RGQDIDCIRIHSDSEGAGT---RSYSYKVLMQTGDAELEMR 1208
Query: 1193 NRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID----RAYVVRIVRDHK 1248
RCSAGQ+VLA LIIRL +++ ++ DE NL + A ++RI+ D K
Sbjct: 1209 GRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT-NLDGPNAESLAAALLRIMEDRK 1267
Query: 1249 ALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEF 1292
Q+NFQLIVITHDE F
Sbjct: 1268 G----------------------------QENFQLIVITHDERF 1283
>gi|428173374|gb|EKX42277.1| Rad50/sbcC double strand break DNA repair processing nuclease,
meiosis and mitosis [Guillardia theta CCMP2712]
Length = 1224
Score = 236 bits (601), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 336/1379 (24%), Positives = 629/1379 (45%), Gaps = 258/1379 (18%)
Query: 1 MALLDQLHIMGIRNF-PADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M +D+L I GIR++ P D+++ ++F PLTLI+G+NG GKTTIIEC++ + P
Sbjct: 1 MTTVDKLLIQGIRSYGPDDRDKQTIQFGCPLTLILGKNGSGKTTIIECLRMITSGALP-- 58
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
P ASSG++F+HDPR + +T ++++++ + N + V V ++
Sbjct: 59 ----------PH--------ASSGQSFIHDPRASNRTKTSSLIRMRFSRLNGEQVTVKQT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCN-------LIGVSKAI 171
L+NK+ + + +S +I K + ES+ C ++GV+KA+
Sbjct: 101 FELANKSEQKQQYRK---VSSEIEIKSANK-----EAESMNRKCGDDNVVPIMMGVTKAL 152
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
L +VIFCHQE S+W L + + +KE FD IF +TKY KALESI+ + + E+ EI
Sbjct: 153 LQHVIFCHQEESNWILGDSRSIKEKFDAIFASTKYAKALESIRKTQQETKTELKEIHERV 212
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ A +++ + N Q+ ++ ++ E++ K ++L L+ + T
Sbjct: 213 NRLRTNRDHAKQQRENLQNYQQRSEEGKRQIEMHEKNCKNAEQELQNLSNTIDEYADKET 272
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSE-LENQERLK 350
Q ++ + + +++ + E+ +KQ F+ D L+S L K+ D C E EN
Sbjct: 273 QVKSLEGRLETLEKFKAQAEADVKQEFTEDVNTLESLLADLKVQ-DRDCQESFEN----- 326
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ EE +N+ Q + +L+ D+ + L+TK C D S+Y+
Sbjct: 327 --LVNEENDVKGKLNDCQENISRLKNDKSNLIRDKQLLETKKEERL-KFCKDIA--SEYS 381
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------------V 458
++ + + +I+ S R F D N +Q++ + + +EK
Sbjct: 382 LDKTD--VNEVGISIESSFS------RVFGDAINAQQSQ-HQIDLEKKKAYFLECHKIIS 432
Query: 459 ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTL-------QVLQTKLNRVNSEIDQ 511
L+ K KS + K+ + + QI +N+ QS L + + ++ +V E+D+
Sbjct: 433 HLQYKTKSNADLQDRKKEVMDDAEKQIKILNEKQSLLSSNDKMWEEREVEITKVQQELDE 492
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLA 571
L +S ++ I+ + ++ + E+ I+AE++ + ++ K + ES+LA
Sbjct: 493 LKESGGQERFTRRIDEFRGEKENKKLEMEQIEAELNRRRCEHDEYISWKHKQRDYESRLA 552
Query: 572 DINLLKERHDRAFHLLFDMIPE-ENFKNSLDKALSSITF--DINRIQEDINAKEKHLYTL 628
N + ++DR F + P+ E+ +N+ D A S +++RI+ ++ ++ L T
Sbjct: 553 KANEILAQNDRKFQEIMKFRPDLESLQNANDIATLSQESRRNMDRIKNEMFQHQQTLETS 612
Query: 629 EANVSNSSKTLRDQKRTLAELMDRM-----------ELVLGSKPFEDELDRVTLELKREQ 677
++N+ S + + K++ +L +R E +LGS + L+R+T L ++
Sbjct: 613 DSNLRKVSSEMDELKKSCEDLRNRSQESAVKGGATRESMLGS-DVDANLERLTKSLNNDK 671
Query: 678 EEVSMMTSTQYLFNSYIGKLEE---NEPRCPLCTRFFESDYSV---------------PG 719
E ++ S + E+ +CP+C + ES+ + P
Sbjct: 672 EILNQQCVANRSLKSLVETFEKFASEHHKCPICAKQVESERQLEKIKSKCASLQADVTPE 731
Query: 720 LVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK--LQDTDIPSLRSKL 777
++ KL+ +I E+ + K H+ C+ + QELK + +++ + ++ ++++
Sbjct: 732 VLKKLEEQIMEV----DKKIGHVAHACELR---QELKGLEAQLLEKSKEAEELSAIKASA 784
Query: 778 IELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQES 837
I+ +E + + K E ++ K + T++ L + +++ L ++ EL +S
Sbjct: 785 IDSQEALTKRKQEAEE-----HDEKVNQLTSI-------LDEMDLKSLARMKSEL--SDS 830
Query: 838 KIS------GMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQK 891
K+S G S+ + ++A++KE ++ +KI++ EK SLQK+
Sbjct: 831 KVSDTAQDDGQNSS---YESLIARKKELQDACIELDTKIDALFKEREVCQEKENSLQKKV 887
Query: 892 NDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT---ELEELGRKVAPIETQLNLAQS 948
+ S++ L++++ ELEG + E+++ + E L+ ++
Sbjct: 888 SLFSSEKEKFDQT-----KLQNQR-ELEGFKKQKENAIIEIQKAQKDQVHDEKLLSEKEA 941
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
E L+KE NE +K+ ++L ++K EI N + R +L + A+R+ ++
Sbjct: 942 EKKNLQKEIDSLQNENDSKLHSMKEKLFQLKSFDSEIYN-SSRSSLDK--AIRDVEGRIK 998
Query: 1009 QRKE-----DIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK 1063
+ ++ D RG CE +E+ +S ++ID L L+ KLN
Sbjct: 999 EEEKKQKERDAEGIRG-CE---SELRKS----EYQDIDKIYALELV-------KLN---- 1039
Query: 1064 LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHH 1123
I DL K + L+ ++K+H+ KM IN+ ++E+W Y
Sbjct: 1040 AKRIAEQDLDKSYKALDRALVKFHTLKMEQINQSLKEFWQNTY----------------- 1082
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQK 1183
+G+DI YI I DV S RRT+NYR+V K
Sbjct: 1083 -----------------------------RGDDIAYIEIKTDVDE-SNNRRTHNYRLVMK 1112
Query: 1184 -KNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEF----IENLTAIDRA 1238
+ +E DMR RCSAGQ+VLA L++RL +++ ++ DE +N+ A
Sbjct: 1113 CLDAVELDMRGRCSAGQKVLASLVVRLALAETFCHNCGILALDEPTSNLDAKNIEGFTDA 1172
Query: 1239 YVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLT 1297
+ R+V + KA ++TF QLIVI+HD EFIENL
Sbjct: 1173 -LSRLVNERKAESDTF---------------------------QLIVISHDMEFIENLA 1203
>gi|403216237|emb|CCK70734.1| hypothetical protein KNAG_0F00650 [Kazachstania naganishii CBS 8797]
Length = 1306
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 339/1355 (25%), Positives = 604/1355 (44%), Gaps = 201/1355 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F PLTLIVG NG GKTT+IEC+K+A T P
Sbjct: 1 MSAIHKLSIQGIRSFDSNDRETIEFGAPLTLIVGMNGSGKTTVIECLKYATTGTLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP+I + + A VKL + N + V R++
Sbjct: 59 -------------------SKGGVFVHDPKITGEKDVRAQVKLAFSSANGLNMIVTRNIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L K + T + + I +G + L E ++ +GV AIL+ VIFCHQ
Sbjct: 100 LLAKKTTNTFKTLEGQLV-AINQSGERTTLSTKSMELDTQVPLYMGVPSAILDYVIFCHQ 158
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYKK 239
E+S WPL E +K+ FDEIF A K+ KA++++K+ ++K++ EIK Q+ + K
Sbjct: 159 EDSLWPLSEPSNLKKKFDEIFQAMKFTKAIDNLKV----IKKDMAVEIKLLQQSVEHLKI 214
Query: 240 EADSKKQL---IYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ D K I K +Q +++ NIE + I + +L + + + ++ +
Sbjct: 215 DRDRSKTTKIKIQQLEAKIEQFRQQVKNIESQILDITGQSDRLFKSNQTFQEVLSKVENL 274
Query: 297 KTERDMIQESCNELE--SSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
KT + + NE+E S+ +L K EL S L+ F + L ++ S+L+ + +Q
Sbjct: 275 KT---LKLATSNEIERLSATIELLDLPKDELSSLLDNFSLTLQQQESKLDQTQYEINQLK 331
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ + ++ ++ K +L +++L T + LD + S Y P E
Sbjct: 332 NQLQNAYIEKDDLIRKEAELTSKRHDYEQLKHDRLTLIEEFKQKFPLDLS--SDY-PTEC 388
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGN 474
L++ + T++ SD ++++ ++ E +K A+I + E+V E+ + +
Sbjct: 389 LRLLRDYKKTLE---SDAQMVK---AEGE-SKLAKIENHVAEQVYEETVQNQKLEYCIRD 441
Query: 475 KKDLTNVI----TQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
K DL I T++ + S+ TL+ + L +N ++ K E+ ++
Sbjct: 442 KTDLKKRIDWLETELKSSDVSEETLEDEKKALTELNGQLANFEKG----NASEEVIKLLK 497
Query: 531 QRN----ELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE--RHDRAF 584
+N E+EL I +I Q A++ +K E K + L+E + +
Sbjct: 498 LKNMDILSAEEELEKIQEQILKTNQQTDLFAKLGLIKKSIEEKKGTVTDLEETLQKNDIS 557
Query: 585 HLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKR 644
+L + E+ K S+ DI ++ KE L + + +S+ + K
Sbjct: 558 QILPTPLNNEDLDLEFKKFYISLQKDIALSNIVLHDKENKLSEITFRLDSSNADIERNKA 617
Query: 645 TLAELMDRMELVLGSKPFEDELDRVT----LELKREQEEVSMMTSTQYLFNSYIGKLEEN 700
+ L R++ L DE D V L K E + M +T FN + +N
Sbjct: 618 EIQALTLRLDAELPEDCPIDEYDEVVADAELSYKTALENLKMHQTT-LEFNRKALDIAQN 676
Query: 701 EPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYE 760
+ C LC+R FE+ L+ +LK K N + T + + +++ L L+ + +
Sbjct: 677 KDCCYLCSRKFENVEVKSRLLAELKKKT-----DANFEHTLVTAVNEEKEFLHNLRTMEK 731
Query: 761 NIMKLQDTDIPSLRSKLIELEENVIE----TKGELKKLKTALETPKTKEKTAL---SLQG 813
+I+ L++ I KL EL+ ++E TK L++++ + K KEK + +L+
Sbjct: 732 DIISLRN--IKEQVKKLEELKPCLVEEHTSTKASLEEIENS--NRKLKEKREVCEKTLRR 787
Query: 814 DLTLLDQNIRELNTLQRE---LERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKI 870
+ + N +ELN L+ E L +Q + T +D++ A+QK+K
Sbjct: 788 TIEQIVDNSKELNLLEAEFKGLSKQLEMYNNSSGTLQTVDELRAEQKQK----------- 836
Query: 871 ESGQTRLNSHNEKLQSLQKQKNDIHS-KQLTVQGGAGMLKSLEDRKCELEGMDSVYQTEL 929
N+ L+ L+K ND+ ++ + ++ ++++ + M+S +E
Sbjct: 837 ----------NDLLRKLRKDINDLQEERERKTKEHNSLINMVKEKTLSIREMESSVASE- 885
Query: 930 EELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRI----KLEI 985
+ + R+ + +T+LN + + ++K E +K E+ K Y +Q +K + + +I
Sbjct: 886 KNIQREYSAKKTELNDIEHHIQSIKSEIEKTKGEKEKKQSQYNRQKLGLKLLTEKSQTDI 945
Query: 986 LNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIAN----------- 1034
+N TK +L + + V++ Q+ + + K C+ TI + + ++ N
Sbjct: 946 INITK--ACDKLGGILDKVRQYEQQDFNALEK---CQDTIKQADSTLKNIEKQLNEKTEY 1000
Query: 1035 -----QSL-----EEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLT--KYHHTLENC 1082
Q L E+ +L++N+ LL K+ + + + +K ++ ++ KY E
Sbjct: 1001 LYMGRQKLQDSNNEKRNLRDNIELLNLKDKLQSIIDNIKRLDVRNAETEREKYQQESEKL 1060
Query: 1083 VIKYHSQKMRSINRLI------------------------REYWTRIYQLKLSEIMISDL 1118
Y + +L ++Y +L+ + D+
Sbjct: 1061 RNLYEGLSAENAGKLGEMKQLQNQIDSLSLQLGSDYKDVDQKYQKEWVELQARTFVTDDI 1120
Query: 1119 TKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNY 1178
Y L+N ++KYH KM INR+I E W R Y G DID I I ++ + + ++YNY
Sbjct: 1121 DTYSKALDNAIMKYHGLKMEDINRIIDELWKRTYSGTDIDTIKIRSEEVNNTVRGKSYNY 1180
Query: 1179 RVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------------- 1213
RVV K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1181 RVVMFKQDAELDMRGRCSAGQKVLASIIIRLALSETFGLNCGVIALDEPTTNLDEENIES 1240
Query: 1214 --------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1241 LAQSLHNIIQMRKYQKNFQLIVITHDEKFLMHMNA 1275
>gi|70993434|ref|XP_751564.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293]
gi|66849198|gb|EAL89526.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293]
Length = 1312
Score = 234 bits (597), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 320/1392 (22%), Positives = 586/1392 (42%), Gaps = 261/1392 (18%)
Query: 7 LHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFV 66
L + +R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 5 LKLNNVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-------- 56
Query: 67 HDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNG 126
S G F+HDP++ + E A VKL + + RSL L+ K
Sbjct: 57 -------------SKGGAFIHDPKLCGEKEVLAQVKLSFKSTSGAKMVATRSLQLTVKK- 102
Query: 127 KDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+ T+ ++ T + + L Q M +GVS+A+L++VIFCHQ
Sbjct: 103 ---TTRQQKTLEGQLLMVKDGERTAISSRVAELDQI----MPQYLGVSRAVLDSVIFCHQ 155
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K++
Sbjct: 156 DESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEK 215
Query: 241 ADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTER 300
AD ++ + + E H + + M+ + E + ++ + + + + K+ E
Sbjct: 216 ADRAEKRSIKLQDEIESLRAETHQLSQEMRRVAELADKAWKESESYAQILGTLEGKRIEA 275
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK-- 358
+Q + + L+ + +L D+ LQS L F + K + + QE + + E K
Sbjct: 276 KSLQSTIDNLKRHLVELDDPDEW-LQSNLEQF----ESKQLQYQQQEEAQKENYMEIKDR 330
Query: 359 --QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
Q+ + Q + GK E D+ ++ + + +A + + Q
Sbjct: 331 IEQARQKLGVKQAEYGKYENDKANFERQVERRQRMTREIARSHNIRGFDNIQ-------- 382
Query: 417 LIKMSQTTIDKYLSDIK--------ILERTFSDNEN---TKQAEINALIVEKVELESKIK 465
Q+ ID ++ I+ LER + + Q+ +N + K L+
Sbjct: 383 ----DQSDIDDFMRKIRKLLKEQNQALERVKREAQTELREVQSTLNEIGQRKSALQESKN 438
Query: 466 SFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
+ K+QI N K+ +N ++NE++ + ++ + ++S ++ L EI
Sbjct: 439 AAKRQIGANDKEASNYQAKLNEIDVDEGVQAAVEANIEDISSRLNHAKDRARSASLDKEI 498
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR--A 583
+ + + LEDE ++AE+ + A + LK + + + +K H A
Sbjct: 499 QDMNSELHALEDEGARLNAELIEATKRAGDFARLDHLKKELKERERSLETMKAAHGERLA 558
Query: 584 FHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQK 643
++ + P + + L T +++ + + + L +E N+ S KTL ++
Sbjct: 559 KYIGANWNP-ATLEQEFQRVLEEETRNVSNAESQRDGVNRELEQVEFNLKTSKKTLAQRQ 617
Query: 644 RTLAELMDRMELVLGSKP--FEDELD--RVTLELKREQEEVSMMTSTQYLFNSYIGKLEE 699
+ L + + +P + D L + L++ R E S ++ K
Sbjct: 618 KELNSCATEIREAINEEPEEYPDALKQRQAQLDVARRDAEQSAGLGDYFMRCLETAK--- 674
Query: 700 NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
C LC R F +D +L+ +K+ Q ++ +++ + + + + Y
Sbjct: 675 QVKACRLCQRAFRADAEFTVFQKRLEGLVKKA--QIGVEEEDVERFEAELDAARAVSTAY 732
Query: 760 ENIMKLQDTDIPSL----------RSKLIELEEN-------VIETKGELKKLKTALETPK 802
+ +L T+IP L R +L+ EN IE K +++ L + T
Sbjct: 733 DTWTRLSKTEIPDLEKEEDQYALQRDELLNQLENHDKIVSEKIEKKRDVEALSKTVNTIV 792
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGM----RSTGVDLDQVLAQQKE 858
E +++ + L N ++ NT R LE + +I+G+ R+ L +++ +++
Sbjct: 793 RYESEIKTIRSQIQDLSSNQQD-NTATRTLEDIQEEIAGIGDKTRALKKTLSKLINDREQ 851
Query: 859 KKNELNTF-------RSKIESGQTRL--------------NSHNEKLQSLQKQKNDI--- 894
+ E+N RSK+++ + +L N +N++ +++ K DI
Sbjct: 852 ARTEMNNLELQLRDARSKLDNVKFQLERKSDLLARIEEYKNLNNQQREAITKADRDIEEL 911
Query: 895 ------------------HSKQLTVQGGAGMLKSLEDRKCEL--EGMDSVYQ----TELE 930
+++ +Q G L S R+ +L E +DS + ++LE
Sbjct: 912 TPELLKYQAQYDDISQRVEAREREMQQGISQL-SERIRQLDLATEEIDSYNERGGPSQLE 970
Query: 931 ELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTK 990
R++ IE ++ S+L+A + K++N+ A+++D E KR + L Y
Sbjct: 971 RSRRELQTIEAEI----SQLEAEQANITKEINKISAQLKDS----ENTKRQYSDNLTY-- 1020
Query: 991 RGTLTQLAALRESVQKLNQRKEDIIAKR--GVCERTINEINQSIANQSLEEIDLKNN--- 1045
R LA + ++ L + ++ R ER E N A Q+ + ++K+
Sbjct: 1021 RQATRALAEVSAEIENLAAQNAEVDRSRFKEESERRTREYNALAAKQASKMGEMKSKDDQ 1080
Query: 1046 -LTLL-----EKKEAVAKLNE---ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1096
+ LL + K+A +K E +++ ++ + DL +Y L+ ++KYHS KM IN
Sbjct: 1081 LMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKMEEINA 1140
Query: 1097 LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGND 1156
+I E W + Y +G D
Sbjct: 1141 IIGELWQKTY----------------------------------------------RGTD 1154
Query: 1157 IDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--- 1213
+D I I +D ++ R+YNYRV K+G E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1155 VDTILIRSD-NENAKGNRSYNYRVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECFG 1213
Query: 1214 ------------------------------------QKNFQLIVITHDEEFIENLTAIDR 1237
Q NFQLIVITHDEEF+ ++ D
Sbjct: 1214 VNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQANFQLIVITHDEEFLRHMQCGDF 1273
Query: 1238 A-YVVRIVRDHK 1248
+ Y R+ R+ K
Sbjct: 1274 SDYYYRVSRNEK 1285
>gi|114108152|gb|AAI22970.1| rad50 protein [Xenopus (Silurana) tropicalis]
Length = 586
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 174/602 (28%), Positives = 308/602 (51%), Gaps = 41/602 (6%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DKN+ V++F PLTL+VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIQGVRSFGIEDKNKQVIQFFTPLTLLVGPNGAGKTTIIECLKYITTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S GK FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------SKGKTFVHDPKVAHETDVRAQIRLQLKDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K T + I+R V + C + + EM + +GVS A+LNNVIFC
Sbjct: 100 MICTQKGKSTEFKTLEGVITRMKHGEKVSLSTKCAEMDK--EMISALGVSSAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EG+++K FDEIF AT+Y KALE+++ R + + E YQ + Y
Sbjct: 158 HQEDSNWPLSEGRQLKVKFDEIFSATRYIKALETLRKVRLNQAQNVRE----YQVEIKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQ----SFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K + I +N Q +++ S E + +IE ++P+ ++L + +RN++ VM
Sbjct: 214 KQNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPLKDRLADI---QRNLTKVMRLDN 270
Query: 294 QTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ K E + +++ +LE ++++F G EL + + EK +L + +R
Sbjct: 271 EIKALESRKRTMEKDNQDLEEKMEKVFQGTDEELSDMYQNHQRTVREKERKLNDHQRDMD 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+ +E ++ + E ++ G+L+ + + H++ T + + +LA L LD ++ +
Sbjct: 331 RACKESQRLNREKGELLVQQGRLQLEADQHQQYIKTRDSLIKSLAAQLELDGFERTPFNQ 390
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ + + +K + + R FS+ E KQ +I+ + +K LE I+ K
Sbjct: 391 RQTSNFQMLVKERQEKDEAHANQILREFSEREAMKQRQIDEIRDKKTGLERTIE-LKSST 449
Query: 472 EGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
+ K DL NV ++ ++ S LQ L +L + E++ + KS + + L+ E+
Sbjct: 450 QSKKHTDLKNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVAQLQS 509
Query: 531 QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDM 590
Q+++L+ + +D E+ L +T ++ LK K K I +K RH+ L
Sbjct: 510 QKSDLDRNVRKLDQEMEQLNTHTMTRTQMDMLKKDKADKDEQIRKIKSRHNDELSSLIGY 569
Query: 591 IP 592
P
Sbjct: 570 FP 571
>gi|67526323|ref|XP_661223.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4]
gi|40740637|gb|EAA59827.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4]
gi|259481852|tpe|CBF75760.1| TPA: subunit of MRX complex (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1319
Score = 230 bits (587), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 332/1421 (23%), Positives = 592/1421 (41%), Gaps = 306/1421 (21%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
++LL + I +R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 18 VSLLTHIAIFSVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-- 75
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKL + + RSL
Sbjct: 76 -------------------SKGGAFIHDPKLCGEKEVLAQVKLSFKGTSGAKMVATRSLQ 116
Query: 121 LSNKNGKDNCATRDTTI--SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K T + + ++ T + + L Q M +GVSKAIL++VIFC
Sbjct: 117 LTVKKTTRQQKTLEGQLLMIKEGERTAISSRVAELDQI----MPQYLGVSKAILDSVIFC 172
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQ+ S WP+ E +K+ FDEIF+A KY KA+++IK LRK+ E Y+ +
Sbjct: 173 HQDESLWPMSEPSVLKKKFDEIFEAVKYTKAIDNIKA----LRKKQNEELGKYKIIEQHA 228
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
KE + +K D++ + ++E ++ + + QLT++ R ++ ++ K
Sbjct: 229 KE----------DKEKADRAEKRSIMLQEEIETLRVETQQLTQEMRRVAELAD-----KA 273
Query: 299 ERDMIQESCNELESSIKQLFSGDKAE---LQSKLNLFK---INLDEKCSELE-NQERLKS 351
R+ +E S I G + E +Q+ ++ K + LDE LE N E+ ++
Sbjct: 274 WRE------SESYSQILGALEGKRIEAKSIQATIDNLKRHLVELDEPDEWLESNLEQFEA 327
Query: 352 QYIQEEKQSHT----------HINEAQMKLG--------------KLERDEETHKKLNDT 387
+ +Q ++Q T I EA+ KLG ER E ++++
Sbjct: 328 RQLQYQQQEETEKEKYMEIKERIEEARHKLGLKQAEYGKHENDKANFERQVERRQRMSKG 387
Query: 388 LKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSD-IKILERTFSDNEN-- 444
L N +D + ++ I K L D ++L+R + +
Sbjct: 388 LARSYNISGFDTIVDQSDVEEFMAR------------IRKILKDQTQVLDRAKREAQGEL 435
Query: 445 -TKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLN 503
Q +N + K L+ + K+QI N K+ +++ ++ + L++
Sbjct: 436 REAQTSLNQISERKSVLQESKNAAKRQIAANDKEAAGYQAKLDSISADEGAQAALESNAE 495
Query: 504 RVNSEIDQL---SKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIK 560
++S +DQ +S D+ +I + IR ELEDE ++AE+ + LA +
Sbjct: 496 DIHSRLDQAKERERSASRDKQIEDINSQIR---ELEDENSRLNAELIEATKKAGDLARLD 552
Query: 561 SLKNRKESKLADINLLKERHDRAFHLLFDMIP-------EENFKNSLDKALSSITFDINR 613
LK + + + +K H + P E++F+ +L+ +++ R
Sbjct: 553 HLKKELKDRERSLETMKSAHGERLSKFVN--PNWKIDTLEQDFQRTLEDKSNAVIM-AER 609
Query: 614 IQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLEL 673
++ ++ + L +E + + K+L +++ L E ++ + + +P E+ D V+
Sbjct: 610 AKDSLS---RELEQVEYKLKDVEKSLTQRQKELKECVEEIREAIDDEP-EEYPDVVS--- 662
Query: 674 KREQEEVSMMTSTQ---YLFNSYIGK---LEENEPRCPLCTRFFESDYSVPGLVNKLKTK 727
+ Q ++ M ST Y+ + + + C +C R F++D + N+L+
Sbjct: 663 -QRQNQLDMAKSTAEQGAGIEEYMSRCLATAKEDKICRVCARSFKNDNDLRTFFNRLEGL 721
Query: 728 IKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLR------------- 774
IK Q + ++QL + + Y+ +L++T+IP L+
Sbjct: 722 IKRAKLQAQAE--DVEQLEQDLNVARAASTAYDTWKRLKETEIPELQQEDEKYTLERDEL 779
Query: 775 ----------------------------SKLIELEENVIETKGELKKLKTALETPKTKEK 806
S ++ + ++ T+ +++ L + + +
Sbjct: 780 LGQLEDRDKAVSEMVEKKRDIEALSKTVSTIVRYDSDIKSTRAQIQDLSSKQQQNTAAPR 839
Query: 807 TALSLQGDLTLLDQNIRE----LNTLQRELERQESKISG----MRSTGVDLDQVLAQQKE 858
T +Q ++ + + R L+ L E E ++I+ +R +LD V Q +
Sbjct: 840 TLEDIQDEIASIGEKTRALKKTLSKLTNEREHARAEINSLELQLRDVKSNLDNVKFQLER 899
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQG-GAGMLKSLEDRKCE 917
K + L S+IE +T N E + + D++ + L Q + + E R+ E
Sbjct: 900 KADLL----SRIEEYKTLNNQQREAIAKADRDIEDLNPELLKYQAIYDDISQRAEARERE 955
Query: 918 LEGM-----DSVYQTEL--EEL---GRKVAPIETQLNLAQSELDALKKEHKKKLNEEGA- 966
L+ + DS++Q EL EE+ + P QL+ ++ EL +++ E + E+ A
Sbjct: 956 LQQIISQLSDSIHQVELASEEIDAYNERGGP--HQLDRSKRELKSIENEISQLETEQAAL 1013
Query: 967 -----KIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKR--G 1019
KI K E KR + L Y R ++ + +++L + ++ R
Sbjct: 1014 TRTINKISTQLKDSENTKRQYADNLTY--RQSVRAFDKVTSEIRELESKNAEVDRSRFKE 1071
Query: 1020 VCERTINEINQSIANQSLEEIDLKNNLTLL---------EKKEAVAKLNE---ELKLSEI 1067
ER E N A QS + ++K+ L + K+A K E +++ ++
Sbjct: 1072 ESERRSREHNALSAKQSSKMGEMKSKDDQLMQLIKDWDTDYKDAAYKYKEAHIKVETTKA 1131
Query: 1068 MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLEN 1127
+ DL +Y L+ ++KYH KM IN +I E W + Y
Sbjct: 1132 AVEDLARYGTALDKAIMKYHGLKMEEINAIIGELWQKTY--------------------- 1170
Query: 1128 CVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGI 1187
+G D+D I I +D + R+YNYRV K G
Sbjct: 1171 -------------------------RGTDVDTILIRSD-NENARGNRSYNYRVCMVKQGA 1204
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISD---------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1205 EMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDII 1264
Query: 1214 -----QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ + D + Y R+ R+ +
Sbjct: 1265 RARQQQANFQLIVITHDEEFLRYMQCGDFSDYYYRVSRNER 1305
>gi|12597247|dbj|BAB21523.1| UVS6 [Neurospora crassa]
Length = 1314
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 333/1390 (23%), Positives = 621/1390 (44%), Gaps = 237/1390 (17%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L+++ I+G+R+F + F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSKLEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG F+HDP + +G+KD A +KL ++ V R++
Sbjct: 61 SGA-FIHDPNL-------------------VGEKD-VQAQIKLSFRSTVGESFVVTRNVQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKAILNNVI 176
L+ T + ++ + A G ++ L V+++ L+ GVS A+L+ VI
Sbjct: 100 LAVTKTSSKQKTLEGSLL--LRANGDRQVLST----RVVDLNKLVPEKLGVSPAVLDAVI 153
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQ+ S WP+ G +K+ FDEIF+A KY K +++IK+ R +E+ ++
Sbjct: 154 FCHQDESLWPMSPGADLKKRFDEIFEAKKYAKVIDNIKLLRKTKGEELRLLRMQEAQDKE 213
Query: 237 YKKEADSK----KQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
K+ AD +LI + RD+ E IE+ I +K E+ + + +
Sbjct: 214 NKERADKVDRELSKLIRELQEDRDKCNELQKQIEDEDVRIKQKW----EQANSFLKIVNE 269
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDK------AELQSKLNLFKINLDEKCSELEN- 345
QTK+ + + +++ EL I++ D+ ++ + + + D+K ++
Sbjct: 270 LQTKQEKLEYKKDAIAELRERIEESTESDEYLRDVLSQYEQTVKRMNSDRDQKVAQFGTL 329
Query: 346 QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTA 405
Q LK+ + HT E Q GK + D+E + + + + + A+ +
Sbjct: 330 QTELKTA-----RAKHTAKVEEQ---GKHQSDKEKYDRQLVSQRQMIQEAAEKHEI---- 377
Query: 406 KSQYTPEEGEGLIKMSQTTIDKYLSDIK-ILERTFSDNENTKQAEINALIVEKVELE--- 461
Y + + I I K L D K LER DN AE++A ELE
Sbjct: 378 -RGYDGDLDDQEINAFYERIQKMLQDTKRDLERLQRDN----AAELDAKSATITELESHK 432
Query: 462 -SKIKSFK---QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
S+I+ K Q++ ++D+T + ++N ++ + VLQT++ + S+I K+
Sbjct: 433 ASRIRDRKISSQRVATLQRDITKLQGELNNLDVDEGAEAVLQTEMEGLESKI----KAAK 488
Query: 518 PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKS----LKNRKES---KL 570
D +E+++ I +L +E+ ++A+ + L + + + S L+ RK+ +
Sbjct: 489 ADNRVSELDSQI---TKLNNEVLTLEAQGAQLSRELVECTNLASERAQLELRKKQLTERK 545
Query: 571 ADINLLKERHDRAFHLLFDMIPE----ENFKNSLDKALSSITFDINRIQEDINAKEKHLY 626
++++LK ++ L D++ E ++ KAL ++ ++ +++ ++ ++ L
Sbjct: 546 RELDILKNTFNQQ---LTDVVGRNWTPETIESDFQKALRQLSDRLSELRKTKDSTQQELK 602
Query: 627 TLEANVSNSS----KTLRDQKRTLAELMDRMELV-LGSKPFEDELDRVTLELKREQEEVS 681
+E ++ + K+++++ ++++ ++ V +KP + +D +K E E++
Sbjct: 603 QVEYKLTTAREQQIKSVKERDSCKKDVLEALKKVPRQNKPVTESVDDYPDAVK-EIEKLL 661
Query: 682 MMTSTQYLFNSYIGKL-------EENEPRCPLCTRFFESDYSVPGLVNKLKTKI-----K 729
T T N Y+ + E + +C LC + + ++ L+ +++ KI
Sbjct: 662 KDTDTDLELNMYLKEYFLKAKVKAEEKHKCYLCEQSLGDEKTMKRLMKRIQDKIDDKDRD 721
Query: 730 EIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKG 789
E+ E H+ L RS++ Y + K ++PS+ ++ L
Sbjct: 722 ELLEDQALYGRHLGTL----RSVRTKHETYGRLCK----ELPSMVEEINSLTLQKERLVR 773
Query: 790 ELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER-QESKISGMRSTG-V 847
+L+ A + + K A L + + Q ++++ +R +ER Q++ + +RS +
Sbjct: 774 QLEDQDGAFKIAEEKRNAADVLSKSVLKIAQTVKDIADSERHIERAQQNSSNQVRSADEI 833
Query: 848 DLDQV-------LAQQKEKKNELNTFRSKIESGQ---TRLNSHNEKLQSLQKQKNDIHSK 897
+ DQ +AQ K K+ R K + Q +L ++ +++QK + H K
Sbjct: 834 NDDQTTCAEQLRIAQAKLSKSTAERQRLKDLAAQLEVEKLELKHKITEAVQKLE---HKK 890
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEH 957
+L +K+ D + EL + ++++ ++V I+ ++ A++ L+ +K+
Sbjct: 891 RLQ-----DTIKNHRDEQSEL-------RKNMQDIDKEVEGIDPEIASARAALEESRKQG 938
Query: 958 KKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL-------AALRESVQKLNQR 1010
+ + + + E+K I EI +Y RG L A+L ++ L +
Sbjct: 939 RAREQRIAEERDGIATTVSELKIINREIQDYLDRGGPANLASNQRTIASLESTIAALEKE 998
Query: 1011 KEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL---LEKKEAVA----------- 1056
+D+ + IN++N+ I N + ++ +NLT L +++A+
Sbjct: 999 MKDVTIQ-------INKLNKEIDNSDAKRRNIADNLTYRKNLRERDALEEEIEELESRNA 1051
Query: 1057 -----KLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI------ 1105
+L EE E+ L L + S K RL EY +
Sbjct: 1052 QEDYDRLVEEAHSFELYRGKLNAERQRLMGSM----STKDEQFRRLEEEYEIELKGARAR 1107
Query: 1106 -----YQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
+++ ++ I DL + + L++ +++YHS KM INR I + W YQG DID I
Sbjct: 1108 YKESHIKVETTKAAIEDLAQGNMALDHAIMQYHSLKMEEINRTIADLWQSTYQGTDIDTI 1167
Query: 1161 SI----AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--- 1213
I + + RR YNYRV K E DMR RCSAGQ+VLAC+IIRL +++
Sbjct: 1168 QIRSYMESTASGATNTRRVYNYRVSMIKGDTEMDMRGRCSAGQKVLACIIIRLALAESFG 1227
Query: 1214 ------------------------------------QKNFQLIVITHDEEFIENLTAIDR 1237
Q NFQLIVITHDEEF++++ D
Sbjct: 1228 ANCGMIALDEPTTNLDSDNIRSLAESLHAIIKARRSQNNFQLIVITHDEEFLKHMQCSDF 1287
Query: 1238 A-YVVRIVRD 1246
+R+ RD
Sbjct: 1288 CDSFLRVKRD 1297
>gi|85111188|ref|XP_963818.1| hypothetical protein NCU00901 [Neurospora crassa OR74A]
gi|28925556|gb|EAA34582.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636462|emb|CAE81997.1| RAD50 homolog uvs-6 [Neurospora crassa]
Length = 1314
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 330/1379 (23%), Positives = 616/1379 (44%), Gaps = 236/1379 (17%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L+++ I+G+R+F + F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSKLEKMSILGVRSFGPRHPEAIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG F+HDP + +G+KD A +KL ++ V R++
Sbjct: 61 SGA-FIHDPNL-------------------VGEKD-VQAQIKLSFRSTVGESFVVTRNVQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKAILNNVI 176
L+ T + ++ + A G ++ L V+++ L+ GVS A+L+ VI
Sbjct: 100 LAVTKTSSKQKTLEGSLL--LRANGDRQVLST----RVVDLNKLVPEKLGVSPAVLDAVI 153
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQ+ S WP+ G +K+ FDEIF+A KY K +++IK+ R +E+ ++
Sbjct: 154 FCHQDESLWPMSPGADLKKRFDEIFEAKKYAKVIDNIKLLRKTKGEELRLLRMQEAQDKE 213
Query: 237 YKKEADSK----KQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
K+ AD +LI + RD+ E IE+ I +K E+ + + +
Sbjct: 214 NKERADKVDRELSKLIRELQEDRDKCNELQKQIEDEDVRIKQKW----EQANSFLKIVNE 269
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDK------AELQSKLNLFKINLDEKCSELEN- 345
QTK+ + + +++ EL I++ D+ ++ + + + D+K ++
Sbjct: 270 LQTKQEKLEYKKDAIAELRERIEESTESDEYLRDVLSQYEQTVKRMNSDRDQKVAQFGTL 329
Query: 346 QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTA 405
Q LK+ + HT E Q GK + D+E + + + + + A+ +
Sbjct: 330 QTELKTA-----RAKHTAKVEEQ---GKHQSDKEKYDRQLVSQRQMIQEAAEKHEI---- 377
Query: 406 KSQYTPEEGEGLIKMSQTTIDKYLSDIK-ILERTFSDNENTKQAEINALIVEKVELE--- 461
Y + + I I K L D K LER DN AE++A ELE
Sbjct: 378 -RGYDGDLDDQEINAFYERIQKMLQDTKRDLERLQRDN----AAELDAKSATITELESHK 432
Query: 462 -SKIKSFK---QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
S+I+ K Q++ ++D+T + ++N ++ + VLQT++ + S+I K+
Sbjct: 433 ASRIRDRKISSQRVATLQRDITKLQGELNNLDVDEGAEAVLQTEMEGLESKI----KAAK 488
Query: 518 PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKS----LKNRKES---KL 570
D +E+++ I +L +E+ ++A+ + L + + + S L+ RK+ +
Sbjct: 489 ADNRVSELDSQI---TKLNNEVLTLEAQGAQLSRELVECTNLASERAQLELRKKQLTERK 545
Query: 571 ADINLLKERHDRAFHLLFDMIPE----ENFKNSLDKALSSITFDINRIQEDINAKEKHLY 626
++++LK ++ L D++ E ++ KAL ++ ++ +++ ++ ++ L
Sbjct: 546 RELDILKNTFNQQ---LTDVVGRNWTPETIESDFQKALRQLSDRLSELRKTKDSTQQELK 602
Query: 627 TLEANVSNSS----KTLRDQKRTLAELMDRMELV-LGSKPFEDELDRVTLELKREQEEVS 681
+E ++ + K+++++ ++++ ++ V +KP + +D +K E E++
Sbjct: 603 QVEYKLTTAREQQIKSVKERDSCKKDVLEALKKVPRQNKPVTESVDDYPDAVK-EIEKLL 661
Query: 682 MMTSTQYLFNSYIGKL-------EENEPRCPLCTRFFESDYSVPGLVNKLKTKI-----K 729
T T N Y+ + E + +C LC + + ++ L+ +++ KI
Sbjct: 662 KDTDTDLELNMYLKEYFLKAKVKAEEKHKCYLCEQSLGDEKTMKRLMKRIQDKIDDKDRD 721
Query: 730 EIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKG 789
E+ E H+ L RS++ Y + K ++PS+ ++ L
Sbjct: 722 ELLEDQALYGRHLGTL----RSVRTKHETYGRLCK----ELPSMVEEINSLTLQKERLVR 773
Query: 790 ELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER-QESKISGMRSTG-V 847
+L+ A + + K A L + + Q ++++ +R +ER Q++ + +RS +
Sbjct: 774 QLEDQDGAFKIAEEKRNAADVLSKSVLKIAQTVKDIADSERHIERAQQNSSNQVRSADEI 833
Query: 848 DLDQV-------LAQQKEKKNELNTFRSKIESGQ---TRLNSHNEKLQSLQKQKNDIHSK 897
+ DQ +AQ K K+ R K + Q +L ++ +++QK + H K
Sbjct: 834 NDDQTTCAEQLRIAQAKLSKSTAERQRLKDLAAQLEVEKLELKHKITEAVQKLE---HKK 890
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEH 957
+L +K+ D + EL + ++++ ++V I+ ++ A++ L+ +K+
Sbjct: 891 RLQ-----DTIKNHRDEQSEL-------RKNMQDIDKEVEGIDPEIASARAALEESRKQG 938
Query: 958 KKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQL-------AALRESVQKLNQR 1010
+ + + + E+K I EI +Y RG L A+L ++ L +
Sbjct: 939 RAREQRIAEERDGIATTVSELKIINREIQDYLDRGGPANLASNQRTIASLESTIAALEKE 998
Query: 1011 KEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL---LEKKEAVA----------- 1056
+D+ + IN++N+ I N + ++ +NLT L +++A+
Sbjct: 999 MKDVTIQ-------INKLNKEIDNSDAKRRNIADNLTYRKNLRERDALEEEIEELESRNA 1051
Query: 1057 -----KLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI------ 1105
+L EE E+ L L + S K RL EY +
Sbjct: 1052 QEDYDRLVEEAHSFELYRGKLNAERQRLMGSM----STKDEQFRRLEEEYEIELKGARAR 1107
Query: 1106 -----YQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
+++ ++ I DL + + L++ +++YHS KM INR I + W YQG DID I
Sbjct: 1108 YKESHIKVETTKAAIEDLAQGNMALDHAIMQYHSLKMEEINRTIADLWQSTYQGTDIDTI 1167
Query: 1161 SI----AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--- 1213
I + + RR YNYRV K E DMR RCSAGQ+VLAC+IIRL +++
Sbjct: 1168 QIRSYMESTASGATNTRRVYNYRVSMIKGDTEMDMRGRCSAGQKVLACIIIRLALAESFG 1227
Query: 1214 ------------------------------------QKNFQLIVITHDEEFIENLTAID 1236
Q NFQLIVITHDEEF++++ D
Sbjct: 1228 ANCGMIALDEPTTNLDSDNIRSLAESLHAIIKARRSQNNFQLIVITHDEEFLKHMQCSD 1286
>gi|149241853|ref|XP_001526369.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450492|gb|EDK44748.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1311
Score = 227 bits (579), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 349/1429 (24%), Positives = 619/1429 (43%), Gaps = 301/1429 (21%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L + GIR F + + ++F PLTLI G+NGCGKTTIIEC+++A T P
Sbjct: 1 MSSIYKLSLKGIRAFEPEHDETIQFGFPLTLICGQNGCGKTTIIECLRYATTGNLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP + + H VKL N ++ RS+
Sbjct: 59 -------------------SKGGAFVHDPGLSSRVAVHGEVKLAFKNANGKSMITTRSVS 99
Query: 121 LSNKNGKDNCATRDTTISRKIFAT----------GVQKNLGCLQQESVLEMCNLIGVSKA 170
+ K K F T G + + E ++ +G S A
Sbjct: 100 ATMK--KGGAGGGAGGNGGLTFKTLEGQLAYIEKGQKTAISSKNAEMDAQIPIFLGASPA 157
Query: 171 ILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----------------- 213
IL+NVIFCHQ++S WPL E +K+ FD+IF+A+K+ K ++++
Sbjct: 158 ILDNVIFCHQDDSLWPLSEASVLKKKFDDIFEASKFTKVIDNLKTIKRDMSVDIKLIEQS 217
Query: 214 ----KIQRDRLRKEIPEIKAHYQAT---------LNYK-----KEADSKKQLIYNNT--Q 253
KI +DR +K ++ Q+ LN K KEAD QL +N Q
Sbjct: 218 VNHLKIDKDRAKKVKDKLAQKTQSVDHFTMEISELNIKIEKKEKEAD---QLFASNQEFQ 274
Query: 254 KRDQSFEELHNIEESMKPINEKLV-----------QLTEKERNMSVMSTQYQTKKTERDM 302
K +E L +ES++ EKL +L K+ N + ++T+ K E
Sbjct: 275 KTLSDYENLLMKKESLEESIEKLKTTITILQDTDEELYHKQENFASINTEKSAKIEE--- 331
Query: 303 IQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHT 362
+Q +LE +K DK+ + ++L +L K +E E+ E+ I E
Sbjct: 332 LQTESFDLEKQLK-----DKSAISNELIRLDGSLKAKKAEYESNEKKIKDIIHEHAALMK 386
Query: 363 HINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQ 422
++ + + + ++ E + L + + + + ++ ++ +S+Y + + ++K Q
Sbjct: 387 YLEQDNISVASFKKSVE--ESLASAKRQQKDFVVESKAKESIQQSKY-QDVCDSILKNEQ 443
Query: 423 TTIDKYLSDIKILERTFSDNENTK----------QAEINALIVEKVELESKIKSFKQQIE 472
T YLS + S N+ T ++ N L V++ ELE Q++
Sbjct: 444 TC--NYLS------QEVSSNQQTLLTLKRKLDVIASDENELTVKRTELEQ----INQELS 491
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
KK +NEV S + +++++ E+D++SK L ++E+++ ++
Sbjct: 492 TKKK--------LNEVKSFDSKIIESNEEISKLEFELDEISKRLVTGNKQSELKSKLKY- 542
Query: 533 NELEDELCVIDAEI-SILQAQN------------ITLAEIKSLKNRKESKLADINL-LKE 578
LED + D + IL+ N I +AE+K KL + L ++E
Sbjct: 543 --LEDSMKQKDDAVQDILKKLNDRYKKIVGSDVDIDVAEVKF-----NEKLVQLTLDMEE 595
Query: 579 RHDRAFHLLFDMIPEENFKNSL-------DKALSSITFDI-NRIQED-INAKEKHLYTLE 629
+ + F L ++ E+ + ++ +K + ++ IQED IN E + LE
Sbjct: 596 QQRKVFSLESELESEKRSREAIFQSRDENNKKTKQLKLELLEVIQEDEINDYETVVENLE 655
Query: 630 ANVSNSSKTLRDQKRTLAELMDRMEL-------VLGSKPF-EDELDRVTLELKR-----E 676
+ N + + + T ME+ +L + F +DEL+R +L+R +
Sbjct: 656 DDYRNVMEDVNTAEVTKKYGDSAMEVAKKNNCCLLCKRTFNKDELERFIEDLRRGFDEKK 715
Query: 677 QEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTN 736
+EV M + IGK E + L + S+ +T+I E +
Sbjct: 716 TQEVKMSANE-------IGKELEETKKIGLKIVTYRECLSLKAT---FETQI----ESAD 761
Query: 737 NKKTHIDQLCKQQRSLQELKPV---YENIMKLQDTDIPSLRSKLIELEENVIETKGELKK 793
K H+++L KQ++S +L N++K +D L S+ ++L + + EL+
Sbjct: 762 AKINHVNELLKQEKSKHDLLKSNVDSANLLKKPLSDTTRLNSESLDLAIQIDDLNDELES 821
Query: 794 LKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVL 853
+ G TL + +L Q+E+ + KI G+R VDL++
Sbjct: 822 YGS----------------GAATL---TVAQLQAQQQEVNK---KIKGLR---VDLNECT 856
Query: 854 AQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGG----AGMLK 909
Q+ + + +L KI+ + +++ L + K I + ++ AG+ K
Sbjct: 857 EQKFKAQRDLQKLEGKIKDTKLVISNLERSLAEVHNVKKSIKDIETAIEQAEMKIAGIQK 916
Query: 910 SLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQ 969
LE+ + E Q E E K++ I+ +LN + E E K+ + ++
Sbjct: 917 KLEELRKE-------KQMEFE----KLSEIQ-RLNSLEEESLQRNTEQISKIYSDFINLK 964
Query: 970 DYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQR----KEDIIAKRGVCERTI 1025
+ ++ E R +LE T+ ++ +++ + L+Q+ +++++ + I
Sbjct: 965 NAIEEYETNDRAELEKNTVEMENTIQEIECIKQKMNHLSQQIKVLEKEVMDSSRIEHNII 1024
Query: 1026 NEINQSIANQSLEEIDLKNN--------LTLLEKKEAVAKLNEELKLSEIMISDLTKYHH 1077
I+ + L+E D + N + LE +E +L +EL S+LT H
Sbjct: 1025 ANIDYRLQIHKLDETDFQINAMDIENAQVKKLEYQEHSRRLRDEL-------SELTSQHA 1077
Query: 1078 TLENCVIKYHSQ----------KMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLEN 1127
V + Q + +++N L E W + L+ + ++ +D+ Y L+N
Sbjct: 1078 GKIGEVKQIKDQIEGLKKELETEYKNVNELYHEEWIK---LQTNLLVSNDIQNYSKALDN 1134
Query: 1128 CVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGI 1187
++K+HS KM INR++ + W++ Y+G+DI I+I +DV ++ R+YNYRVV K+
Sbjct: 1135 AIMKFHSIKMEDINRILGDLWSQTYKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKDNS 1194
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISD---------------------------------- 1213
E DMR RCSAGQ+VLA ++IRL +++
Sbjct: 1195 ELDMRGRCSAGQKVLASILIRLALAECFGANCGMIALDEPTTNLDNENAEALALALNRII 1254
Query: 1214 -----QKNFQLIVITHDEEFIENLTAIDRA--YVVRIVRDHKALAETFS 1255
Q NFQLIVITHDE+F+ ++ DR + RI RD KA + +S
Sbjct: 1255 EYRKQQLNFQLIVITHDEKFLTHIQG-DRFTDHFYRIQRDEKAKSRIYS 1302
>gi|296826796|ref|XP_002851033.1| DNA repair protein Rad50 [Arthroderma otae CBS 113480]
gi|238838587|gb|EEQ28249.1| DNA repair protein Rad50 [Arthroderma otae CBS 113480]
Length = 1285
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 315/1363 (23%), Positives = 586/1363 (42%), Gaps = 225/1363 (16%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG GKT C
Sbjct: 16 IDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTL---C----------------- 55
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
G+K E A VKL + + V RSL L+
Sbjct: 56 ----------------------------GEK-EVFAQVKLAFKATSAAKMVVTRSLQLTV 86
Query: 124 KNGKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
K + T+ ++ T + + L Q M +GVSKA+L++VIF
Sbjct: 87 KK----LTRQQKTLEGQLLMIKEGERTAISSRVAELDQI----MPQYLGVSKAVLDSVIF 138
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK LRK+ E A Y+ N+
Sbjct: 139 CHQDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKA----LRKKQNEELAKYKIMENH 194
Query: 238 KKEADSKKQLIYNNTQKRDQSFEEL----HNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
++ K + K + E L H + + M+ + E + ++ + + +
Sbjct: 195 ARDDKDKADRAEKRSLKLQEEIEGLRAESHELSKEMRRVAELADKAWKESESYAEILGAL 254
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQY 353
+ K+ E IQ S N L+ + ++ D+ LQS L F+ + E ++ LK +Y
Sbjct: 255 EGKRIEAKSIQTSINNLKQHLVEVDESDEW-LQSTLEQFE---SRQAEYREQEDSLKEKY 310
Query: 354 IQEEK---QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ ++ Q+ + Q + GK E D+ + + + L D ++ +
Sbjct: 311 MDLKELIEQNRHKLGIKQTECGKNENDKAQYDRQVER--------RGKLIKDIARQNNFR 362
Query: 411 PEEGEGLIKMSQTTIDKYLSDIK--------ILERTFSDNEN---TKQAEINALIVEKVE 459
+G+ + +T I+ ++ ++ LE+ + +N Q +N L +
Sbjct: 363 GFDGD----LDETDINDFMERMQKLSKERHQALEKAKREAQNQLRDAQTLLNQLSQRRSA 418
Query: 460 LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL-----SK 514
L+ + K+QI N K+ + +I+E++ + ++++++ + + +
Sbjct: 419 LQEVKNAAKKQISLNDKEADTIQRRIDEIDVDEGKRAMIESRMEETEKNLKKEKEKAKNA 478
Query: 515 SLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN 574
S + D +NE E LED+ ++AE+ + LA + LK + + +
Sbjct: 479 SWETDLQQNEAEI-----QSLEDKSSKLNAELIQGTKKAGDLARLDHLKKELKDRERSLE 533
Query: 575 LLKERH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVS 633
+ H DR +L+ N + AL + I + + + K L L+ +
Sbjct: 534 TMSGAHGDRISNLVDPSWTPSNVEQGYQSALKKASDLITTAERERDGSSKELEHLDFKLK 593
Query: 634 NSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMM--TSTQYL-F 690
N+ K+L+ + ++ V+G +P E +K++Q E+ M + QY
Sbjct: 594 NARKSLQQHSAEVENAAKKINDVIGDEPEE-----YPHTVKQKQTELDMARKDADQYAGL 648
Query: 691 NSYIGK---LEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
Y+ K + C C R F+++ + NKL IK+ ++ + I+
Sbjct: 649 GEYLNKCLDAANGKKVCRTCARPFKTESELQIFKNKLMALIKKATDE--DVVAEIEAREA 706
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKL--KTALETPKTKE 805
+++EL VYE ++L TDIP+L+ + +LE E +G L KL + ++ + +
Sbjct: 707 DLENVRELGTVYETWIRLTGTDIPALKKEQSDLES---EREGVLAKLEERDSIVAQRMES 763
Query: 806 KTAL-SLQGDLTLLDQNIRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNE 862
K + SL ++ ++ + E+ LQ+++ +K +G T D+ +A EK E
Sbjct: 764 KRNIESLSKNIAIIVRYNSEILILQKQIGDLSAKQEETGSSRTLEDIQDEIATLGEKSRE 823
Query: 863 LNTFRSKI--ESGQTRLNSHNE--KLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL 918
L K+ E Q+R++ KL+ LQ++ + + ++ ++ +E E
Sbjct: 824 LKRVAGKLTHELNQSRVDVGRLELKLRDLQRE---LDNTNFQLEKKTTLVSRVE----EC 876
Query: 919 EGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
++ + +E + + +++ AQ+ D + +++ E +I T L ++
Sbjct: 877 RNLNLKQRETIENADNDIEGLIPEVSTAQARHDDISTRSEQRERELQQEISSLTDSLHQL 936
Query: 979 KRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLE 1038
+ +I NY +RG QL + +Q ++ + + A++ R +N I+ + +
Sbjct: 937 ELASEDITNYIERGGPAQLERSKRELQNISDEIKRLEAEQTDLTRELNSISTRLKDSEST 996
Query: 1039 EIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK-MRSINRL 1097
+ +NL ++ +A+ +N+E ISDL + ++ + S++ R N L
Sbjct: 997 KRQYSDNLRYRQESKALISVNQE-------ISDLESQNAEVDRSRFREESERNTREHNAL 1049
Query: 1098 IREYWTRIYQLK--------------------------------LSEIMISDLTKYHHTL 1125
+ +++ ++K ++ + DL +Y L
Sbjct: 1050 AAKQASKMGEMKSKDDQLMQLLADWNTDYKDAGAKFKEAHIKVETTKAAVDDLGRYGGAL 1109
Query: 1126 ENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKN 1185
+ ++KYHS KM INR+I E W + Y+G D+D I I +D + R+YNYRV K
Sbjct: 1110 DKAIMKYHSLKMEEINRIIGELWQKTYRGTDVDTILIRSD-NESARGNRSYNYRVCMVKQ 1168
Query: 1186 GIEQDMRNRCSAGQRVLACLIIRLFISD-------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1169 DAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHD 1228
Query: 1214 -------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D Y R+ R+ +
Sbjct: 1229 IIRARQQQANFQLIVITHDEEFLRSMQCGDFCDYYYRVSRNER 1271
>gi|71652374|ref|XP_814845.1| DNA repair protein RAD50 [Trypanosoma cruzi strain CL Brener]
gi|70879853|gb|EAN92994.1| DNA repair protein RAD50, putative [Trypanosoma cruzi]
Length = 1346
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 354/1421 (24%), Positives = 605/1421 (42%), Gaps = 267/1421 (18%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ I G+R+F PA + +V FQ+PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIQISGVRSFDPNPAHRQTIV-FQKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G+ S K+ +FV+DP++ + + A ++L T + V+R
Sbjct: 60 GSGSEKS-------------------SFVYDPKVMGETDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNV 175
S K T D+T++ + ATG K L + + ++ + ++GVS A+L +V
Sbjct: 101 SFQALRTRTKTTFTTLDSTVAFQDTATG--KVLSSTYRANDVDRAVPEMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+++WPL K+VK+IFDEIF AT+Y AL+ ++ R++ E +A+ A
Sbjct: 159 IFCHQEDANWPLLPPKEVKKIFDEIFAATRYVLALDRLRENSKEFRRQQKEHEANLMALR 218
Query: 236 NYKKEAD------SKKQLIYNNTQKRDQSFE----ELHNIEESMKPINEKLVQLTEKERN 285
++++A + K+ + Q+R +S E ELH + ++ + + L
Sbjct: 219 EHREQAQQLTGDIAAKEELVRTIQQRSKSLEPQLKELHAVTAALSAVEQGAEGLAR---- 274
Query: 286 MSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELEN 345
E MIQ +E + S+ ++ ++ FK E+ LE
Sbjct: 275 -------------EAAMIQGRIDEKQESLSRMTLPPTTLTIEEMLEFKQGFAERIKGLEA 321
Query: 346 QERLKSQYIQEEKQSHTHINEAQMKLGK----LERDEETHKKLNDTLKTKLNNLAD--TL 399
K+ +++ + E ++L LE+ E +K+ L+ + NL+ L
Sbjct: 322 DASDKANLLEKAEAKKQQCEETALRLRSTTEFLEQQERQYKENRVELQGIVKNLSTGLVL 381
Query: 400 CLDTTAKS--QYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK 457
C D + Q + +++++ DK L + ++ D N ++A EK
Sbjct: 382 CDDDMCEEDLQRVSDHLNAELQLARAERDKALKEFDDEKKLLEDQRNMLLRSMDADNKEK 441
Query: 458 VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
E ++K Q++ ++ L + + T L + I +L + L+
Sbjct: 442 DMKEDQLKHLHQRVVSTEEALGKLKPYVG------------ATYLESLKKTISELEQRLE 489
Query: 518 P-DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL 576
++LK + E + +QR +D L IDA+ I+ LA K + A++NLL
Sbjct: 490 VMEELKKKGENY-KQR---QDILQRIDAQNRIVAGLRQELARHKECLGGE----AEMNLL 541
Query: 577 ------KERHDRAFHLLFDMIPE-ENFKNSL--DKALSSITFDINR-----------IQE 616
KER A + ++PE NF + + +LS I+ I + IQ
Sbjct: 542 RTQITEKERFLEA-EMRETLVPELSNFGHEMTEGSSLSQISLLIEQLREQKLGVLRAIQT 600
Query: 617 DINAKEKHLYTLEAN-VSNSSKTLRD-----QKRT--------LAELMDRMELVLGSKPF 662
+ ++ + L+ N + +R+ +KRT L E+ D E VL
Sbjct: 601 EHGELDRQIAVLQQNRAQRMEEIMRENSELQRKRTNCVKALDGLGEI-DHFEAVL----- 654
Query: 663 EDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVN 722
E R LE R + ST Y + ++ E +CP+C R F + S+ V
Sbjct: 655 --EKARDLLEAARNRHHALEAMSTCYANFVQVARV---EGKCPVCDRGFTDELSLANFVE 709
Query: 723 KLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEE 782
+ PE +K H++ ++R ++ L+ + ++ D+ L S + LE
Sbjct: 710 LNERHHGASPEMI--EKAHLEAKEAEER-VRILETLEADVH-----DVRRLASSVPHLEL 761
Query: 783 NVIETKGELKKLKTALETPKTKEKTA---LSLQGDL--TLLDQNIR--ELNTLQRELERQ 835
V T EL LE + K + L DL T +D N ++ L+++L R+
Sbjct: 762 LVTRTNEELANKSALLEDAERKREDVEHQLKRVQDLMRTAIDLNAVACDVRALRQQLSRR 821
Query: 836 ESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIH 895
E+ I +++ V A + E ++ ES T L+ N L Q+ + D
Sbjct: 822 EAAIKELQAEVVTAAGGGADGGARTYE--EVSAEYESANTELHRLNVMLNEAQR-REDGE 878
Query: 896 SKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE-LGR----------KVAPIET--- 941
S Q A L + +LE M + Q ELEE L R ++A I
Sbjct: 879 SD----QAAASELNARRAEYYQLE-MKWMRQGELEEVLARYKGEENGYRERIAAINAGQE 933
Query: 942 ----QLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEIL----NYTKRGT 993
+L QS +D L++ + + E A Q ++EE ++ I+ +Y
Sbjct: 934 GVREELLRLQSRIDTLQRARQ---DAECAAQQGRIGKIEESTQMLAGIVPKMRDYFASKH 990
Query: 994 LTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
QL RE +Q + + + I E + + Q + +++ ++ +K++
Sbjct: 991 GEQLFRAREQMQLAEASRLRAVDEVRQLREAIQESRRVVDEQHRQAVEVGKHIEAFKKRQ 1050
Query: 1054 AV----AKLNE-ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW-----T 1103
++ A+L E E L+E+ ++ L VI + + I LIRE +
Sbjct: 1051 SIDEDQARLQEVERSLTEMKSREIRGVAAILGADVIA--GETVSRIRELIREKVSELERS 1108
Query: 1104 RIYQLKLSEIMISDLT------------------------------------KYHHTLEN 1127
R Q E M+ D+T KY+ LE
Sbjct: 1109 RAQQEGNVEAMMQDITNLRSQLAREKYHDIEKRYRSTFLKVQTTEIAVADIEKYYRALEK 1168
Query: 1128 CVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYNYRVVQKKNG 1186
V YH +K+ IN+++ + W + Y+G+DID + + + D T + RR+Y+YRVV K+
Sbjct: 1169 AVQSYHQEKIAQINQILADLWRQTYKGSDIDTVELRSEDDVTSTTARRSYSYRVVMKRGN 1228
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISDQ-------------------------------- 1214
E DMR RCSAGQ+VLA ++IRL +S+
Sbjct: 1229 SEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNARSLAESLRLL 1288
Query: 1215 -------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRD 1246
K+FQLIVITHDE+F+ L A+D Y +R RD
Sbjct: 1289 IENHRAVKHFQLIVITHDEQFVRALGGQALDTFYYIRKDRD 1329
>gi|66911163|gb|AAH97553.1| LOC495064 protein, partial [Xenopus laevis]
Length = 555
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 172/580 (29%), Positives = 303/580 (52%), Gaps = 43/580 (7%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DKN+ V++F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIQGVRSFGIEDKNKQVIQFFTPLTVLVGPNGAGKTTIIECLKYITTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S GK FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------SKGKTFVHDPKVAHETDVRAQIRLQLKDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K T + I+R V + C + + EM + +GVS A+LNNVIFC
Sbjct: 100 MICTQKGKSTEFKTLEGVITRIKHGEKVSLSTKCAEMDK--EMISALGVSAAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EG+++K FDEIF AT+Y KALE++K R + + E YQ + Y
Sbjct: 158 HQEDSNWPLSEGRQLKVKFDEIFSATRYIKALETLKKVRTQQAHNVRE----YQVEIKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQ----SFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K + I +N Q +++ S E + +IE ++P+ ++L + +RN+S VM
Sbjct: 214 KQNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPLKDRLADI---QRNLSKVMRLDN 270
Query: 294 QTKKTE---RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLK 350
+ K E R M Q++ +LE ++++F G EL + ++ EK +L +Q+R
Sbjct: 271 EIKALESRKRTMEQDN-QDLEEKMEKVFQGTDEELNGMYQNHQRSVREKERKLNDQQREM 329
Query: 351 SQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYT 410
+ +E ++ + E ++ G+L+ + + H++ T + + +LA L LD ++ +
Sbjct: 330 DRACKESQRLNREKGELLVQQGRLQLEADHHQQYIKTRDSLIKSLAAQLELDGFERTPFN 389
Query: 411 PEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQ 470
+ + + +K + + R FS+ E KQ +++ + +K LE I+ K
Sbjct: 390 QRQTSNFQMLVKERQEKDEAHANQILREFSEREAMKQRQLDEMRDKKTGLERTIE-LKSS 448
Query: 471 IEGNKK-DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
+ K DL NV ++ ++ S LQ L +L + E++ + KS + + L+ E+
Sbjct: 449 TQSKKHTDLKNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVLQLQ 508
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK 569
Q++EL+ + +D E+ + +T ++ LK K K
Sbjct: 509 NQKSELDRNVRKLDQEMEQMNTHTMTRTQMDMLKKDKADK 548
>gi|170284923|gb|AAI61019.1| rad50 protein [Xenopus (Silurana) tropicalis]
Length = 555
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 300/579 (51%), Gaps = 41/579 (7%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I G+R+F DKN+ V++F PLTL+VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSKIEKMSIQGVRSFGIEDKNKQVIQFFTPLTLLVGPNGAGKTTIIECLKYITTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S GK FVHDP++ + + A ++LQ N + V V RS
Sbjct: 61 ---------------------SKGKTFVHDPKVAHETDVRAQIRLQLKDVNGELVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K T + I+R V + C + + EM + +GVS A+LNNVIFC
Sbjct: 100 MICTQKGKSTEFKTLEGVITRMKHGEKVSLSTKCAEMDK--EMISALGVSSAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EG+++K FDEIF AT+Y KALE+++ R + + E YQ + Y
Sbjct: 158 HQEDSNWPLSEGRQLKVKFDEIFSATRYIKALETLRKVRLNQAQNVRE----YQVEIKYL 213
Query: 239 KEADSKKQLIYNNTQKRDQ----SFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQY 293
K+ K + I +N Q +++ S E + +IE ++P+ ++L + +RN++ VM
Sbjct: 214 KQNKEKAREIQDNLQSKEKQLAVSKENVKSIESQLEPLKDRLADI---QRNLTKVMRLDN 270
Query: 294 QTKKTE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKS 351
+ K E + +++ +LE ++++F G EL + + EK +L + +R
Sbjct: 271 EIKALESRKRTMEKDNQDLEEKMEKVFQGTDEELSDMYQNHQRTVREKERKLNDHQRDMD 330
Query: 352 QYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTP 411
+ +E ++ + E ++ G+L+ + + H++ T + + +LA L LD ++ +
Sbjct: 331 RACKESQRLNREKGELLVQQGRLQLEADQHQQYIKTRDSLIKSLAAQLELDGFERTPFNQ 390
Query: 412 EEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ + + +K + + R FS+ E KQ +I+ + +K LE I+ K
Sbjct: 391 RQTSNFQMLVKERQEKDEAHANQILREFSEREAMKQRQIDEIRDKKTGLERTIE-LKSST 449
Query: 472 EGNK-KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIR 530
+ K DL NV ++ ++ S LQ L +L + E++ + KS + + L+ E+
Sbjct: 450 QSKKHTDLKNVKYELQQLEGSSDRLQELDEELQKTERELENVEKSCNLEALRGEVAQLQS 509
Query: 531 QRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK 569
Q+++L+ + +D E+ L +T ++ LK K K
Sbjct: 510 QKSDLDRNVRKLDQEMEQLNTHTMTRTQMDMLKKDKADK 548
>gi|303312857|ref|XP_003066440.1| DNA repair protein RAD50, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106102|gb|EER24295.1| DNA repair protein RAD50, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1217
Score = 219 bits (558), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 286/1199 (23%), Positives = 523/1199 (43%), Gaps = 160/1199 (13%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M +GVS+AIL+NVIFCHQ+ S WPL E +K+ FDEIF+A KY KA+++IK L
Sbjct: 47 MPQYLGVSRAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQKYTKAIDNIKA----L 102
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEEL----HNIEESMKPINEKL 276
RK+ E A Y+ Y KE K + + + E L H + + MK +
Sbjct: 103 RKKQNEELAKYKIMEQYAKEDKDKADRAEKRSIQLQEEIEALRAESHELSKEMKKAADLA 162
Query: 277 VQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAE--LQSKLNLFKI 334
+ ++ + + + + K+ E IQ S + L+ + L D++E L+S L F
Sbjct: 163 DKAWKESESYAEILGALEGKRIEVKSIQTSIDNLK---QHLVEVDESEEWLESTLEQFG- 218
Query: 335 NLDEKCSELENQERLKSQYI--QEEKQSHTH-INEAQMKLGKLERDEETHKKLNDTLKTK 391
+ E +E LK +Y+ +E + + H + Q + GK E D+ ++ +
Sbjct: 219 --SRQAEYREQEESLKEKYVDLKENIERNRHQLGLKQAEYGKHENDKAQFERQVER---- 272
Query: 392 LNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILER----TFSDNENTKQ 447
L D ++ EG+ + + I++++ ++ L R T + Q
Sbjct: 273 ----RGKLIRDIARQNNLRGFEGD----LDEMEINEFMQRLQKLSRDRNQTLDRAKREAQ 324
Query: 448 AE-------INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQT 500
E +N L K L+ + + QI N K+ + ++NE+ + L +L++
Sbjct: 325 VELREVQSLLNRLSQRKSALQEGKNAARNQISQNDKEADSYQHRLNEIEIDEGKLAILES 384
Query: 501 KLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIK 560
++ + Q + +++ + LE+E +++AE+ + LA +
Sbjct: 385 RIEETEGCLQQAKDKAKTASWEKDLQTKNAELRSLEEESSLLNAELIEGTKKAGDLARLD 444
Query: 561 SLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDIN 619
LK + + + + H DR L+ N + L+ T + + Q D +
Sbjct: 445 HLKKELKDRERSLETMASAHGDRISQLISQAWNPSNIEQEFQSVLNDATVSLTKAQRDRD 504
Query: 620 AKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEE 679
K L +E + N+ K+L+ K+ L + + R+ + +P E+ D V K++Q
Sbjct: 505 GASKELEYIEVTMKNARKSLQQHKQELDDCVQRIREAIDDEP-EEYPDVV----KQKQSS 559
Query: 680 VSMMTS--TQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPE 733
+ M QY Y+GK E + C C R F+++ KL+ +K+
Sbjct: 560 LEMAKKDVDQYAGLGEYLGKCLEAARQKKVCRTCGRGFKTEKEFHDFSLKLENLLKKAT- 618
Query: 734 QTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKL-------------IEL 780
N + ++ QL + + + Y+ ++L +T IP ++ +E
Sbjct: 619 -MNAEDENVVQLEEDLEIARNAQTYYDTWVRLSNTTIPEAEKEISRLELEREELLVKVED 677
Query: 781 EENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKIS 840
+ ++ KGE K+ +L T T +G++ L I++L+T Q++
Sbjct: 678 HDAIVSEKGESKRDIESLSKTIT---TIAKYEGEIKTLKVQIQDLSTKQQQ--------P 726
Query: 841 GMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQ 898
G T ++ +A E EL +KI E Q+R ++ L+ Q D+ S+
Sbjct: 727 GSSRTLEEIQDTIATIGEGCRELKRAIAKITNERDQSRT-----EITELELQLRDVRSEL 781
Query: 899 LTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELD---ALKK 955
+ S+E R E +++ + +E+ + + +++ AQ++ D A +
Sbjct: 782 DNARFQLDKKASIEARLEEYRNLNTKQRESIEKADHDIESLVPEVSKAQAKFDDINARAE 841
Query: 956 EHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDII 1015
+ +++L +E + + D QL+ +I++Y RG QL + V+ + + E +
Sbjct: 842 QKERELQQEVSSLSDSLHQLDLASE---DIVSYNDRGGPRQLERSKREVENITKEIEQLE 898
Query: 1016 AKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKY 1075
A++G R +N ++ + + + +NL + A+ ++ E+ E +++ +
Sbjct: 899 AEQGSLTRQLNAVSARLQDSENTKRQYSDNLRYRREMRALGEVKAEIARLEAQNAEVDRA 958
Query: 1076 HHTLE--------NCVIKYHSQKMRSI----NRLIR-------EYWTRIYQLKLSEI--- 1113
E N + + KM + N+L++ +Y ++ K + I
Sbjct: 959 RFKEESDRRTREYNFLSATQASKMGEMKSKDNQLLQLLADWNTDYKDAAFKFKEAHIKVE 1018
Query: 1114 ----MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTG 1169
+ DL +Y L+ ++KYHS KM INR+I E W + Y+G D+D I I +D
Sbjct: 1019 TTKAAVEDLGRYGGALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSD-NEN 1077
Query: 1170 SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------- 1213
++ R+YNYRVV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1078 AKGNRSYNYRVVMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTT 1137
Query: 1214 -----------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R K
Sbjct: 1138 NLDRDNIRSLAESLHDIIRARQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRSDK 1196
>gi|312377979|gb|EFR24674.1| hypothetical protein AND_10571 [Anopheles darlingi]
Length = 889
Score = 219 bits (557), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 258/933 (27%), Positives = 444/933 (47%), Gaps = 107/933 (11%)
Query: 439 FSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVL 498
F +++ KQ E++ L V K LES S KQQI+ + N ++ + S TL+ L
Sbjct: 5 FDEDDVRKQKEVDKLRVLKATLESDCSSKKQQIQQMDLEKMNTEKEVATIEHSAETLEKL 64
Query: 499 QTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAE 558
++ + E + + + + L+ E+ A R EL+++ ++ I + + E
Sbjct: 65 NEEIAMLEQEYEHHASTTNLPALRAELAAKKRVIKELQEQSDNLEERIHEMDKFAMKEKE 124
Query: 559 IKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE----ENFKNSLDKALSSITFDINRI 614
+ + + S+ +++ LK +H + LF PE N+K +L S+ +IN +
Sbjct: 125 LTMKEQQYNSRESEVRRLKSKHADSLRRLF---PERTIDSNYKRNLQDLYDSLQPEINGV 181
Query: 615 QEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELK 674
E + E + +E + L R A+ ++M P+++ + R+ ++
Sbjct: 182 NEKLRRSEGVITEMETLRKTQKQQLDRLTREKADAEEKMYSACRGMPYDEVVARLKEKID 241
Query: 675 REQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPE- 733
+ E S LF YI + CP+C + SD ++ + KL +I+ +P+
Sbjct: 242 KNTLEHGEARSAVVLFQKYISNINSAHC-CPVCDKEMTSDDAL-DVSGKLSDEIRRLPQK 299
Query: 734 -QTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELK 792
+T K D+L + L LK V E + K Q ++P ++ +L E E + + E++
Sbjct: 300 IETLEKGLKSDRL--EYDKLLALKSVAEMLDK-QKQELPKVKQQLQETERRLAQASEEVE 356
Query: 793 KLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQV 852
+L+ AL P + + ++ GD+++LD+N REL ++R +E+ + +++ GV + +
Sbjct: 357 ELQIALSEPTSNVQLINTIVGDMSILDENNRELERMKRGVEQLKEELNAKIPPGVSSEAL 416
Query: 853 LAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLE 912
Q++ + +L R + Q L+S +KL +LQ + N++ +K+L +Q
Sbjct: 417 KVQRESLREQLKLERRLSDELQGNLDSKADKLNNLQSRNNEMKAKKLKLQ---------- 466
Query: 913 DRKCELEGMDSVYQT--ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQD 970
E + S+ Q ++ EL K+ +ET L Q L+ +K+E +K+ E+ + Q
Sbjct: 467 ------ESVQSLGQKREKVLELTDKICSLETDLAETQCRLEPMKRELDQKVAEKLSAKQQ 520
Query: 971 YTKQLEEVKRIKLEILNYTKR------GTLTQLAALRESVQ------KLNQRKEDIIAKR 1018
++QL++ ++ LE LN + L +LA+L S + K++Q K D +
Sbjct: 521 SSQQLQKARKT-LEGLNQKESEIDRLCSELDKLASLNLSSELQRLQDKIDQAKSDRERAQ 579
Query: 1019 GVCER---TINEINQSIANQSLEEIDLKNN----LTLLEKKEAVAKLNEELK-LSEIMIS 1070
+ E+ I I Q IA ++E DL +N + + E A+L+ +K + EI S
Sbjct: 580 CIVEQHTENIERIKQDIAEHHIQERDLLDNRDLKMLMRESTNLQAELDALMKSMGEIDYS 639
Query: 1071 DLTKYHHTL---------ENCVIKYHSQKMR----SINRLIREY----WTRIYQLKLSEI 1113
L L + +K Q+++ S+ ++ + TR Y E
Sbjct: 640 GLNAERTRLIDLRDGLQVKQSELKGQIQELKLQIQSLQEVLEQAKYKDATRNYMKTFCES 699
Query: 1114 -----MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVG 1167
+ISDL KY LE + +YH++KM INR I W IY+GNDIDYI I D G
Sbjct: 700 VALRKIISDLKKYRDALERALREYHTEKMEVINRTILSLWRAIYRGNDIDYIRIRTEDDG 759
Query: 1168 TGSE---KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITH 1224
G+E +RR Y+Y VVQ KN +E +MR RCSAGQRVLA LIIRL +++ + V+
Sbjct: 760 NGTERSDRRRLYSYGVVQAKNDVEIEMRGRCSAGQRVLASLIIRLALAETFSSNCGVMAL 819
Query: 1225 DEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLI 1284
DE T +DR + ++L E+ R I + + NF LI
Sbjct: 820 DEPT----TNLDRENI-------ESLCESLRR---------------IVSERENANFLLI 853
Query: 1285 VITHDEEFIENLTAIDRAYVVRIVRDHKGLSDI 1317
VITHDEEF+ L + Y RI R+ +G S I
Sbjct: 854 VITHDEEFVTKLEKFETYY--RISRNREGKSVI 884
>gi|209946150|gb|ACI97306.1| RAD50 [Drosophila yakuba]
Length = 633
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 193/672 (28%), Positives = 330/672 (49%), Gaps = 68/672 (10%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKVKEANMKHVAYLKQEMEVKTLNLQQAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +L+++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLMEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKL 371
IK LF G AEL +++ N D++ E+ + + + + K+S Q KL
Sbjct: 274 GKIKNLFGGTLAELDQEIS----NFDQRMQEVHQKRTVVEGDLSQIKRSKVS---EQEKL 326
Query: 372 GKLERDEETHKKLNDT-------LKTKLNNLADTLCLDTTAKSQYTPEE-GEGLIKMSQT 423
G +R K+ + + L ++ + + + PE+ GE L +
Sbjct: 327 GTQDRKHCLAKQRHQSELACRAQLLKRVKDFCREVHITINCDLVEQPEKMGEVLQDIEAM 386
Query: 424 TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVIT 483
I K+ +I+E+ + ++Q +I+ L +E + E + + ++Q E +K++ +
Sbjct: 387 IITKHCEITEIVEQN-EKADRSRQVKIDELRIELTKSEQSVTAQEKQRESSKRESDTIGE 445
Query: 484 QINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI---EAWIRQRNELEDELC 540
QI ++ S L+ L+ ++N VN + +K +D +K+ I +A I Q N++ +
Sbjct: 446 QIKKIETSMQDLKKLEKEINDVNELYESANKDIDQQAIKDAIARQKASIAQ-NQI--QFK 502
Query: 541 VIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEENFKNS 599
+D +++ L +AEI SLK ++ + K +++ ++ RH F F N++ S
Sbjct: 503 KLDEQLTFLGTMAKLVAEI-SLKQKELDKKNQEVHRVRSRHSDNFGKFFKEPITCNYRRS 561
Query: 600 LDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLG- 658
+ + +I + E N+++ + E N + D + EL EL+
Sbjct: 562 MQGVYDKLRREIQDLNEKANSQKLKEQSFEIKRKN---LIGDISQMEKELNMSEELIFEK 618
Query: 659 --SKPFEDELDR 668
S P+ED L+R
Sbjct: 619 CRSTPYEDLLER 630
>gi|209946154|gb|ACI97308.1| RAD50 [Drosophila simulans]
Length = 633
Score = 213 bits (541), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 191/676 (28%), Positives = 325/676 (48%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANMKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDE---------------KCSELENQERLKSQYIQE 356
IK F G EL +++ F + E K S + QE+L +Q +
Sbjct: 274 LKIKNPFRGTLDELDQEISNFDQRMQEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ T+ L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHITIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + ++Q +I+ L ++ + E + + ++Q E +K+
Sbjct: 380 LQDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIDLTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +KS+D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESANKSIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N+++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQDLNEKANSQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946158|gb|ACI97310.1| RAD50 [Drosophila simulans]
Length = 633
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 191/669 (28%), Positives = 324/669 (48%), Gaps = 62/669 (9%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANMKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKL 371
IK F G EL ++ IN D++ E+ + + + K+S Q KL
Sbjct: 274 LKIKNPFRGTLDELDQEI----INFDQRMQEMRQKRTEVEGNLSQIKRSSVA---EQEKL 326
Query: 372 GKLERDEETHKKLNDT-------LKTKLNNLADTLCLDTTAKSQYTPEE-GEGLIKMSQT 423
G +R K+ + + L ++ L ++ PE+ GE L +
Sbjct: 327 GTQDRKHCLAKQRHQSELACRAQLXKRVKEFCRELHINIDCDLVEQPEKMGEVLQDIEAM 386
Query: 424 TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVIT 483
I K+ +I+E+ + ++Q +I+ L ++ + E + + ++Q E +K++ +
Sbjct: 387 IITKHCEITEIVEQN-EKADRSRQVKIDELRIDLTKSEQSVTAQEKQRESSKRESETLGV 445
Query: 484 QINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVID 543
+I ++ S L+ L+ ++N VN + +KS+D +K+ I E + + +D
Sbjct: 446 EIKKIETSMQDLKKLEKEINEVNELYESANKSIDQQAIKDAIARKKASIAENQIQFKKLD 505
Query: 544 AEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDK 602
+++ L + +AE SLK ++ + K +++ ++ RH F LF N++ S+
Sbjct: 506 EQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRSMQV 564
Query: 603 ALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---S 659
+ +I + E N ++ + E N + D R EL D EL+ S
Sbjct: 565 VYEKLRREIQDLNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEELIYQKCRS 621
Query: 660 KPFEDELDR 668
P++D L+R
Sbjct: 622 TPYDDLLER 630
>gi|58262284|ref|XP_568552.1| telomere maintenance protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57230726|gb|AAW47035.1| telomere maintenance protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1289
Score = 212 bits (539), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 326/1370 (23%), Positives = 589/1370 (42%), Gaps = 262/1370 (19%)
Query: 42 TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIV 101
TIIEC+K+A T + P G FVHDP++ + E A V
Sbjct: 2 TIIECLKYATTGDMPPNTKGGA---------------------FVHDPKMAGEKEVKAQV 40
Query: 102 KLQCTCENNDTVCVVRSL-LLSNKNGKDNCATRDTTISRKIF--ATGVQKNLGCLQQESV 158
+L+ + + R+L + + K G+ T + +++ ++G + + E
Sbjct: 41 RLRFWNAKRERMTATRNLQVTTKKTGQLTMKTLEGILAKTDVGDSSGKRNTISTKCSEMD 100
Query: 159 LEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRD 218
E+ L+GVS+AIL NVIFCHQE S+WPL E +K+ FD+IF+ATKY KAL++IK
Sbjct: 101 EEVPYLLGVSRAILENVIFCHQEESNWPLSEPAALKKKFDDIFEATKYTKALDNIKT--- 157
Query: 219 RLRKE-IPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEK-- 275
LRKE + E+K + K + D ++L ++D +EES+ N K
Sbjct: 158 -LRKERMAELKVDKERLKFLKADKDKAERL------RKD--------LEESISQENRKQT 202
Query: 276 -LVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKI 334
L L E+ + + + ++ + T I E L+ K+++ ++ SKLN+ +
Sbjct: 203 ELDNLKERYETIKIRNAEFYEEATHFRQIYEQSKSLKEK-KKMYEDNRK--HSKLNMQE- 258
Query: 335 NLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNN 394
+DE EL + ++ H+ M+ + E +E + + L+ K N
Sbjct: 259 -MDESTEEL----------LHMQQNFDAHLRTLTMQRSEKEDAKEKEESELEDLRVKERN 307
Query: 395 LAD-------------------TLCLDTTAKSQ------YTPEEGEGLIKMSQT---TID 426
LA+ + AK+ Y+P E + + +
Sbjct: 308 LANRQGGLVAHRQTYERNLREREAAIRQIAKAHDLVGYDYSPLEDSKVAEFVDKIYEMVR 367
Query: 427 KYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQIN 486
K +D+K L+ S E Q E++ L K ++ KS ++QI + + +
Sbjct: 368 KAENDLKKLQTENSRKERELQEELDRLSTMKTSAQATKKSKEEQIIRLTEKIRTSEATFH 427
Query: 487 EVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP---DQLKNEIEAWIRQRNELEDELCVID 543
++ L++ Q KL + +++ + + D+ N+ IRQ+ ELE + I+
Sbjct: 428 SISNPSVELELNQNKLTELEADLSKFQAEITDAKYDEKINQKGLLIRQK-ELERD--NIN 484
Query: 544 AEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF--------------- 588
AE+++L + + A++ +N E K + I+ L + H+ F L
Sbjct: 485 AELAVLNRKADSRAKLDLQRNELEGKNSQISTLLKTHEAKFRELVEVDIHDVKPEDIEDK 544
Query: 589 ----------DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTL----EANVSN 634
D+I EEN ++L++ S + ++R +E++ K++ ++ + EA + N
Sbjct: 545 VIGAISRKDRDLIQEENNASALNRDHSQVQASLSRAREELAIKKREIHNMQREIEAAIYN 604
Query: 635 SSKTLRDQK------RTLAELMD--RMELVLGSKPFED-ELDRVTLELKREQEEVSMMTS 685
++ +++ + LAE D R E+ + D + RV E ++T+
Sbjct: 605 VNQPAEEEEVPAEEAKNLAEAFDICRSEIESVQRAIMDKQGSRVVWE--------GLLTT 656
Query: 686 TQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQL 745
+ G + C C R + + + ++ KI+++ E ++ +D
Sbjct: 657 VK------AGGV------CEACNRGIKHEEK-NAVTRHMEAKIRQLMEA---EQAGVDAE 700
Query: 746 CKQQRSLQEL-------KPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTAL 798
+ ++S E+ +P I LQ IP L +++ E EE + E+ KT++
Sbjct: 701 IEVEKSWTEILDALIRVEPHEAKIQDLQRRVIPRLETQIKEGEEKLRSLVKEVDDSKTSI 760
Query: 799 ETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKE 858
+ K+ + +L+ + +++ E L+ ++R ++++ S+ +++V +
Sbjct: 761 QKLKSASRDLQNLKATASYINRLYIETGDLKANVKRLQTELESSGSSKT-VEEVQKEVDR 819
Query: 859 KKNELNTFRSKIESGQTRLNSHNE-KLQSLQKQKNDIHSKQLTVQGGAGMLKSLED-RKC 916
E+ T + Q +S E K+ +L+ +++I K L + G LK+ +D RK
Sbjct: 820 VSQEIKTLSRE----QQAFSSEKELKVNALRATQDEIGRKSLHI----GRLKAQQDKRKM 871
Query: 917 ELEGMDSVYQT------ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQD 970
E E + + T EL++L + V E L + E E +++
Sbjct: 872 EEEALSDMQNTLGTLHDELQDLDQTVQAAEAPWKEKNETLGRFRTERANAEKEASTQVRM 931
Query: 971 YTKQLEEVKRIKLEILNYTKRGTLTQL----AALRESVQKLNQRKEDIIAKRGVCERTIN 1026
Y L E++ Y G ++ AA+ E ++++Q + R E I+
Sbjct: 932 YQSSLGEIEGKHKACQAYVAEGNDRKIRENEAAMSEIKRQISQSND----ARAALEAEIS 987
Query: 1027 EINQSIANQSLEEIDLKNNLTLLE-------------------KKEAVAKLNEELKLSEI 1067
++ ++ + ++++NL E E+ AK N+E K
Sbjct: 988 ALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELDLDSAAESRAKFNKEYKG--- 1044
Query: 1068 MISDLTKYHHTLENCV-----IKYHSQKMRSI-----NRLIREYWTRIYQLKLSEIMISD 1117
M+ + T+ + ++ + QKM + +E+ ++ + +SE +D
Sbjct: 1045 MLDEETEAQGLMAITQGGLLEMRTNRQKMEKTLKTDYKNIDKEHKEQLIKTTISEYANND 1104
Query: 1118 LTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS-EKRRTY 1176
L KY L+N ++KYHS KM IN I W + YQG DID I I +D S R++Y
Sbjct: 1105 LEKYGKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTSTRKSY 1164
Query: 1177 NYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------------- 1213
NYRVV KN +E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1165 NYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLDQENI 1224
Query: 1214 ----------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
Q NFQLIVITHDE F++ L D Y R+ RD
Sbjct: 1225 NALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRD 1274
>gi|34849666|gb|AAH58180.1| Rad50 protein [Mus musculus]
Length = 661
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 191/748 (25%), Positives = 363/748 (48%), Gaps = 112/748 (14%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S KN K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKNKKTEFKTLEGVITRMKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQVQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I + + S E + + E+ ++P+ +L ++ E N+S +M + K
Sbjct: 218 EKACEIRDQITSKEAQLASSQEIVRSYEDELEPLKNRLKEI---EHNLSKIMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 335 EARLLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIK 394
Query: 416 G---LIKMSQ----TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFK 468
L+K Q T + LSD+ +D E KQ +++ EL +
Sbjct: 395 NFHELVKERQEREAKTASQLLSDL-------TDKEALKQRQLD-------ELRDRKSGLG 440
Query: 469 QQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ-LSKSLDPDQLKNEIEA 527
+ IE + LT +++ V +S LQ L+ +R+ E+DQ L+K+ D D+
Sbjct: 441 RTIELKTEILTKKQSELRHV---RSELQQLEGSSDRI-LELDQELTKATDKDE------- 489
Query: 528 WIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLL 587
I +K RH L
Sbjct: 490 --------------------------------------------QIRKIKSRHSDELTSL 505
Query: 588 FDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLA 647
P K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+
Sbjct: 506 LGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLS 562
Query: 648 ELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPL 706
D++ V GS+ E +L R+ E+++ ++ +M+ +++ +I +L +EN+ CP+
Sbjct: 563 SYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPV 622
Query: 707 CTRFFESDYSVPGLVNKLKTKIKEIPEQ 734
C R F+++ + +++ L++K++ P++
Sbjct: 623 CQRVFQTEAELQEVISDLQSKLRLAPDK 650
>gi|209946164|gb|ACI97313.1| RAD50 [Drosophila simulans]
Length = 633
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 191/676 (28%), Positives = 324/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANMKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDE---------------KCSELENQERLKSQYIQE 356
IK F G EL +++ F + E K S + QE+L +Q +
Sbjct: 274 LKIKNPFRGTLDELDQEISNFDQRMQEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ T+ L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHITIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + ++Q +I+ L ++ + E + + ++Q E +K+
Sbjct: 380 LQDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIDLTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +KS+D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESANKSIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDNFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQDLNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|407853317|gb|EKG06364.1| DNA repair protein RAD50, putative [Trypanosoma cruzi]
Length = 1342
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 340/1448 (23%), Positives = 593/1448 (40%), Gaps = 325/1448 (22%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ I G+R+F PA + +V FQ+PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIQISGVRSFDPNPAHRQTIV-FQKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G+ S K+ +FV+DP++ + + A ++L T + V+R
Sbjct: 60 GSGSEKS-------------------SFVYDPKVMGETDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNV 175
S K T D+T++ + ATG K L + + ++ + ++GVS A+L +V
Sbjct: 101 SFQALRTRTKTTFTTLDSTVAFQDTATG--KVLSSTYRANDVDRAVPEMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+++WPL K+VK+IFDEIF AT+Y AL+ ++ R++ E +A+ A
Sbjct: 159 IFCHQEDANWPLLPPKEVKKIFDEIFAATRYVLALDRLRENSKEFRRQQKEHEANLMALR 218
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
++++A +QL+ + K E + I++ K + +L +L +S + +
Sbjct: 219 EHREQA---QQLMGDIAAKE----ELVRTIQQRAKSLEPQLKELHAVTAALSAVEQGAEG 271
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E MIQ +E + S+ ++ K+ FK E+ LE K+ ++
Sbjct: 272 LAREAAMIQGRIDEKQESLSRMALPPTTLTIEKMLEFKQGFAERIKGLEADTSDKANLLE 331
Query: 356 EEKQSHTHINEAQMKLGK----LERDEETHKKLNDTLKTKLNNLADTLCL--DTTAKS-- 407
+ + E ++L LE+ E +K+ L+ + NL+ L L D +
Sbjct: 332 KAEAKKQQCEETVLRLRSTTEFLEQQERQYKENRMELQGIVKNLSTGLVLGDDDICEEDL 391
Query: 408 QYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
Q + +K+++ DK L + ++ D N ++A EK E ++K
Sbjct: 392 QRVSDHLNAELKLARAERDKALKEFDDEKKLLEDQRNMLLRSMDADNKEKDMKEDQLKHL 451
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP-DQLKNEIE 526
Q++ ++ L + + T L + I +L + L+ +LK E
Sbjct: 452 HQRVVSTEEALGKLKPYVG------------ATYLESLKKTISELEQRLEVMKELKKNGE 499
Query: 527 AWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL------KERH 580
+ +QR +D L IDA+ I+ LA K + A++NLL KER
Sbjct: 500 NY-KQR---QDILQRIDAQNRIVAGLRQELARHKECLGGE----AEMNLLRTQITEKERF 551
Query: 581 DRAFHLLFDMIPE-ENFKNSL--DKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
A + ++PE NF + + ++LS I+ I +++E + + T +
Sbjct: 552 LEA-EMRETLVPELSNFGHEMTEGRSLSQISLLIEQLREQKLGVLRVIQTEHGELDRQIA 610
Query: 638 TL-RDQKRTLAELM-----------------------DRMELVLGSKPFEDELDRVTLEL 673
L + Q + + E+M D E VL E R LE
Sbjct: 611 VLQQSQAQRMEEIMRENSELQRKRTNCVKALDGLGEIDHFEAVL-------EKARDLLEA 663
Query: 674 KREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSV--------------PG 719
R + ST Y + ++ E +CP+C R F + ++ P
Sbjct: 664 ARNRHHALEAMSTCYANFVQVARV---EGKCPVCDRGFTDELALANFVELNERHHGASPE 720
Query: 720 LVNKLKTKIKE----------------------------------IPEQTNNKKTHIDQL 745
++ K + KE I E+ NK ++
Sbjct: 721 MIEKAHLEAKEAEERVRILETLEADVHDVRRLASSVPHLELLVTRISEELANKSALLEDA 780
Query: 746 CKQQRSLQ-ELKPVYENIMKLQD-----TDIPSLRSKLIELEENVIETKGELKKLKTALE 799
+++ ++ +LK V + + D D+ +LR +L E + E + E+ + A
Sbjct: 781 ERKREDVEHQLKRVQDLMRTAIDLNAVACDVRALRQQLFRREAAIKELQAEV--VTAAGG 838
Query: 800 TPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQE---------SKISGMRSTGVDL- 849
+T E+ + + T L + LN + E +R+E S+++ R+ L
Sbjct: 839 GARTYEEVSAEYESANTELHR----LNVMLNEAQRREDGESDQAAASELNARRAEYYQLE 894
Query: 850 ---------DQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQS----LQKQKND--- 893
++VLA+ K ++N + I +GQ + +LQS LQ+ + D
Sbjct: 895 MKWMRQGELEEVLARYKGEENGYRERIAAINAGQEGVREELLRLQSRLDTLQRARQDAEC 954
Query: 894 ------IHSKQLTVQGGAGMLKSLEDRKCELEG---MDSVYQTELEELGRKVAPIET-QL 943
I + + Q G++ + D G + QT+L E R A E QL
Sbjct: 955 AAQQGRIGKIEESAQMLVGIVPKMRDYFASKHGEQLFRAREQTQLAEASRLRAVDEVRQL 1014
Query: 944 NLAQSELDALKKEHKKKLNEEGAKIQDYTK---------QLEEVKRIKLEILNYTKRGTL 994
A E + E ++ E G I+ + K +L+EV+R E+ + RG
Sbjct: 1015 REAIQESRRVVDEQHRQAVEVGKHIEAFEKRQSIDEDQARLQEVERSLTEMKSREIRGVA 1074
Query: 995 TQLAA--------------LRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEI 1040
L A +RE V +L + + + + + +A + +I
Sbjct: 1075 AILGADVIAGETVSRIRELIREKVSELERSRAQQEGNVEAMMQDVKNLRSQLAREKYHDI 1134
Query: 1041 DLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1100
+ + T L +++ +EI ++D+ KY+ LE V YH +K+ IN+++ +
Sbjct: 1135 EKRYRSTFL-----------KVQTTEIAVADIEKYYRALEKAVQSYHQEKIAQINQILAD 1183
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
W + Y +G+DID +
Sbjct: 1184 LWRQTY----------------------------------------------KGSDIDTV 1197
Query: 1161 SI-AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ----- 1214
+ + D T + RR+Y+YRVV K+ E DMR RCSAGQ+VLA ++IRL +S+
Sbjct: 1198 ELRSEDDVTSTTARRSYSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDC 1257
Query: 1215 ----------------------------------KNFQLIVITHDEEFIENLT--AIDRA 1238
K+FQLIVITHDE+F+ L A+D
Sbjct: 1258 GILALDEPTTNLDEDNARSLAESLRLLIENHRAVKHFQLIVITHDEQFVRALGGQALDTF 1317
Query: 1239 YVVRIVRD 1246
Y +R RD
Sbjct: 1318 YYIRKDRD 1325
>gi|209946206|gb|ACI97334.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 191/676 (28%), Positives = 327/676 (48%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + ++Q +I+ L +E + E I + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIELTKSEQSITAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQNLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946160|gb|ACI97311.1| RAD50 [Drosophila simulans]
Length = 633
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 191/676 (28%), Positives = 324/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANMKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDE---------------KCSELENQERLKSQYIQE 356
IK F G EL +++ F + E K S + QE+L +Q +
Sbjct: 274 LKIKNPFRGTLDELDQEISNFDQRMQEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ T+ L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHITIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + ++Q +I+ L ++ + E + + ++Q E +K+
Sbjct: 380 LQDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIDLTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +KS+D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESANKSIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDNFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQDLNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946152|gb|ACI97307.1| RAD50 [Drosophila simulans]
Length = 633
Score = 211 bits (537), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 191/676 (28%), Positives = 323/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANMKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDE---------------KCSELENQERLKSQYIQE 356
IK F G EL +++ F + E K S + QE+L +Q +
Sbjct: 274 LKIKNPFRGTLDELDQEISNFDQRMQEMRQKRTEVEGNLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ T+ L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHITIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I E+ + ++Q +I+ L ++ + E + + ++Q E +K+
Sbjct: 380 LQDIEAMIITKHCEITEIFEQN-EKADRSRQVKIDELRIDLTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +KS+D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESANKSIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDNFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQDLNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|115389648|ref|XP_001212329.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194725|gb|EAU36425.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1210
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 269/1189 (22%), Positives = 526/1189 (44%), Gaps = 140/1189 (11%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M +GVSKAIL++VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R +
Sbjct: 47 MPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQ 106
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+E+ + K Q K++AD ++ + + E H + + M+ + E +
Sbjct: 107 NEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIEALRAETHQLSQEMRRVAELADKAW 166
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
++ + S + + K+ E +Q + + L+ + +L D+ L+ L F + +
Sbjct: 167 KESESYSQVLGALEGKRIEAKSVQTTIDNLKRHLVELDDPDEW-LEQNLEQF----ESRQ 221
Query: 341 SELENQERLKSQYIQEEK----QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLA 396
+ + QE + + E K Q + Q + GK E D+ +++ + + +A
Sbjct: 222 VQFQQQEEAQKESYMEIKDRIEQCRHKMGVKQAEYGKYENDKANYERQIERRQRMAKEMA 281
Query: 397 ---DTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINAL 453
+ D + E +K + + + + ++R Q +N +
Sbjct: 282 RSNNIRGFDNVQDQAHMDE----FMKKVRKLLKDHNQALDRIKREAQGELREVQTTLNDI 337
Query: 454 IVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS 513
K L + K+QI N+K+ + ++NE+N + L+ + + S ++Q
Sbjct: 338 GQRKSALHETKNAAKRQIAANEKEAASYQGKLNEINVDEGVQAALEANIEDIMSSLNQAK 397
Query: 514 KSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADI 573
+ EI+ + LEDE +++E+ + LA + LK + + +
Sbjct: 398 ERAQSASWDKEIQNVNSEIRGLEDESARLNSELIDATKRAGDLARLDHLKKELKERERSL 457
Query: 574 NLLKERHDR--AFHLLFDMIP---EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTL 628
+K H A ++ D P E+ F++SLD+ ++ N+ +A + L +
Sbjct: 458 ETMKGAHGGRLAKYVGADWKPDTLEQEFQHSLDQESKLVSTAENK----RDAVSRELEQV 513
Query: 629 EANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQY 688
E +S+ KTL +++ L E ++ + +G +P +E + L+ ++ Q +++ + QY
Sbjct: 514 EFKLSDVKKTLAQRQKALKECVEEIREAVGDEP--EEFPEI-LKQRQAQLDIARKDAEQY 570
Query: 689 L-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQ 744
Y+ + + C LCTR F++D + NKL+ +K+ Q + + +
Sbjct: 571 AGIGEYMKTCLDTAKQAKVCRLCTRGFKNDTELQSFRNKLENLVKKA--QRDAQDDEVRG 628
Query: 745 LCKQQRSLQELKPVYENIMKLQDTDIPSLRSK-----------LIELE--ENVIETKGEL 791
+ + Y+ ++L+DT+IP L + L ELE + ++ K E
Sbjct: 629 FEEDVNVARAASSAYDMWLRLKDTEIPELEKEEGEYLNKRDGLLAELENHDKIVSEKMEK 688
Query: 792 KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQ------RELERQESKISGMRST 845
K+ AL T + G++ + I++L++ Q R LE + +I+ +
Sbjct: 689 KRDVEALSKTVN---TIVKYDGEIKSIRAQIQDLSSKQQDSNSSRTLEDIQDEINAISEK 745
Query: 846 GVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGA 905
L + L + K+ QTR ++ +LQ L+ K+++ + + ++ A
Sbjct: 746 SRALKKTLLKLTNDKD------------QTRSEINSLELQ-LRDVKSNLDNAKFQLERKA 792
Query: 906 GMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEG 965
+L +E K +++ + +E+ + + + +L Q++ D + + +++ E
Sbjct: 793 DLLTRMEQYKT----LNTQQREAIEKADKDIEALTPELLQVQAKYDDISQRAEQREREMQ 848
Query: 966 AKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTI 1025
I ++ + +++ EI Y RG +QL + ++ + Q + ++ R I
Sbjct: 849 QTISQLSENIHQLELSNEEIEAYHGRGGPSQLDQSKRELESIEQEISQLEEEQATITREI 908
Query: 1026 NEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE----- 1080
N+I+ + + + +NLT + K+ EE++ E +++ + E
Sbjct: 909 NKISAQLKDSENTKRQYADNLTYRQANRTFEKVTEEIEQLEAQNAEVDRSRFKEESERRT 968
Query: 1081 ---NCVIKYHSQKMRSI----NRLIR--EYWTRIY------------QLKLSEIMISDLT 1119
N + + KM + ++L++ W Y +++ ++ + DL
Sbjct: 969 REHNALAAKQASKMGEMKSKDDQLMQLLADWNTDYKDAAAKYKEAHIKVETTKAAVDDLA 1028
Query: 1120 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYR 1179
+Y L+ ++KYH KM IN +I E W + Y+G D+D I I +D ++ R+YNYR
Sbjct: 1029 RYGGALDKAIMKYHGLKMEEINAIIGELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYR 1087
Query: 1180 VVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------------------------- 1213
V K G E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1088 VCMVKQGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSL 1147
Query: 1214 -------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ K
Sbjct: 1148 AESLHDIIRARRLQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNEK 1196
>gi|209946170|gb|ACI97316.1| RAD50 [Drosophila melanogaster]
gi|209946184|gb|ACI97323.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 327/676 (48%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + ++Q +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRSRQVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|154275250|ref|XP_001538476.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414916|gb|EDN10278.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1261
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 305/1332 (22%), Positives = 571/1332 (42%), Gaps = 211/1332 (15%)
Query: 42 TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIV 101
TIIEC+K+A T + P S G F+HDP++ + E A V
Sbjct: 2 TIIECLKYATTGDLPPN---------------------SKGGAFIHDPKLCGEKEVLAQV 40
Query: 102 KLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEM 161
KL + + RSL L+ K T + + + G + ++ E M
Sbjct: 41 KLSFKSVSGARMVATRSLQLTVKKTTRQQKTLEGQLL--MVKDGERTSISSRMAELDQIM 98
Query: 162 CNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLR 221
+GVSKAIL++VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R +
Sbjct: 99 PQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQN 158
Query: 222 KEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTE 281
+E+ + K Q K +AD ++ + + E H + + M+ E + +
Sbjct: 159 EELSKFKIMEQHAKENKDKADRAEKRSIKLQDEIEALRAESHELSQQMRRAAELADKAWK 218
Query: 282 KERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCS 341
+ + + + + K+ E IQ S L+ + ++ D+ L+ L F+ ++
Sbjct: 219 ESESYAQILGTLEGKRIEAKSIQSSITNLQEHLVEVDESDEW-LERTLEQFE---SQQTQ 274
Query: 342 ELENQERLKSQYIQEEKQ----SHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLAD 397
E + LK +Y+ E KQ + T + Q + GK E D
Sbjct: 275 YREQEVSLKEKYV-ELKQVIEDNRTRLGLKQAEYGKHEND-------------------- 313
Query: 398 TLCLDTTAKSQYTPEEG--EGLIK--MSQTTI---DKYLSDIKILE-----RTFSDNENT 445
K+Q+ + G E LIK Q I D L D+++ E R S ++N
Sbjct: 314 --------KAQFERQLGRREKLIKEIARQNNIRGFDHDLDDMQVNEFMQRIRKLSKDQNQ 365
Query: 446 ---------------KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQ 490
Q+ +N L K L+ + ++QI N + + +++ ++
Sbjct: 366 ALERARQEAQMELREAQSLLNQLSQRKSALQEVKNAARKQISSNDIEADSYQRRLDGIDI 425
Query: 491 SQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAW---IRQRNE----LEDELCVID 543
+ + VL+++ I++ +SL+ + K + +W I+ + LEDE ++
Sbjct: 426 DEGSKAVLESR-------IEETERSLNEAKGKAKAASWDSTIQSKTAEIRLLEDESSKLN 478
Query: 544 AEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFKNSLDK 602
AE+ + LA + LK + + + ++ H DR L +
Sbjct: 479 AELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTQEWNPSTLDQEYQR 538
Query: 603 ALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPF 662
AL T + R++ D + + L E + + K L ++ L + + ++ + +P
Sbjct: 539 ALQEATNALTRVERDRDGVSRELEHAEFKLKTTRKDLLQRRNELKQCIQKIRDAVDDEPA 598
Query: 663 E--DELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR---CPLCTRFFESDYS 716
E D L + ++L +++ + QY Y+ K + + C +C+R F+++
Sbjct: 599 EYPDILKQRQVQL-----DMAKKDADQYAGLGEYLSKCMDAARQKKVCRMCSRPFKTEGE 653
Query: 717 VPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+NKL +K + ++ + QL + + Q + Y+ ++L T+IP+L
Sbjct: 654 FQIFLNKLDALVKRATQDAVDE--SMQQLEEDLEAAQSVSTFYDTWVRLSSTEIPAL--- 708
Query: 777 LIELEENVIETKGEL---------KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT 827
E EE+ +E++ E+ K + +E+ K E + ++ ++ D I+ L +
Sbjct: 709 --EKEESHLESQREILLSQVEDHDKIVSERVESKKNVESLSKTV-ATVSKYDSEIKTLRS 765
Query: 828 LQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLNSHNEKLQ 885
+ L + + G R T D+ + ++ EK E SK+ E Q+R +L+
Sbjct: 766 QIQNLLANQQDVGGTR-TLEDIQEQISAIGEKSREFQKVISKLNNEKDQSRTEITALELK 824
Query: 886 SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNL 945
L+ +N++ + ++ A + +E E +++ + +E+ + + + +++
Sbjct: 825 -LRDVRNNLDNANYHLEKKASLAARVE----EYRNLNAKQREAIEQADQDIESLAPEVSK 879
Query: 946 AQSELDALKKE---HKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRE 1002
AQ+ D + +++L +E +++ D QL EI +Y RG LA +
Sbjct: 880 AQALYDDISSRAGARERELQQEASQLSDSLHQLSLTNE---EITSYNDRGGPALLAKCEK 936
Query: 1003 SVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN--- 1059
V+ + + ++G + IN I+ + + + +NL + A+ +N
Sbjct: 937 EVRNIETEIASLEREQGSITKDINAISARLKDSENTKRQYADNLRYRRETAALEDVNATI 996
Query: 1060 EEL-----KLSEIMISDLTKYHHTLENCVIKYHSQKMRSI----NRLIR--EYWTRIY-- 1106
EEL ++ + ++ N + + KM + ++L++ W Y
Sbjct: 997 EELAAQNAEVDRSRFREESERRTREHNALSARQASKMGEMKSKDDQLMQLLADWNTDYKD 1056
Query: 1107 ----------QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGND 1156
+++ ++ + DL +Y L+ ++KYHS KM INR+I E W + Y+G D
Sbjct: 1057 AAVKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTD 1116
Query: 1157 IDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--- 1213
+D I I +D ++ R+YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1117 VDTILIRSD-NENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFG 1175
Query: 1214 ------------------------------------QKNFQLIVITHDEEFIENLTAIDR 1237
Q NFQLIVITHDEEF+ ++ D
Sbjct: 1176 VNCGLIALDEPTTNLDRDNIRSLAESLHDIIKSRQQQSNFQLIVITHDEEFLRHMQCGDF 1235
Query: 1238 A-YVVRIVRDHK 1248
+ Y R+ R+ +
Sbjct: 1236 SDYYYRVSRNER 1247
>gi|209946188|gb|ACI97325.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 326/676 (48%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + + Q +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRSXQVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LINDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946198|gb|ACI97330.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 325/676 (48%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMDELKIKEANIKVEAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + Q +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRXXQVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N+VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINQVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946190|gb|ACI97326.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 325/676 (48%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + Q +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRXXQVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|302851368|ref|XP_002957208.1| hypothetical protein VOLCADRAFT_119635 [Volvox carteri f.
nagariensis]
gi|300257458|gb|EFJ41706.1| hypothetical protein VOLCADRAFT_119635 [Volvox carteri f.
nagariensis]
Length = 1167
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 279/1213 (23%), Positives = 520/1213 (42%), Gaps = 166/1213 (13%)
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRD---------RL 220
A+L NVIF HQE S+WPL EGK +KE FD+IF ATKY KALE+++ R RL
Sbjct: 1 AVLENVIFVHQEESNWPLAEGKVLKEKFDDIFAATKYTKALEALRKLRTEKAQSLKEYRL 60
Query: 221 R----KEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFE-ELHNIEESMKPINEK 275
K++ ++ H+ + ++EA S+ + Q + SFE ++ ++E+ + K
Sbjct: 61 SMETLKQVKDMATHH---MGQREEAKSR----VADCQAQMASFETKIRDLEQQRSALASK 113
Query: 276 LVQLTEKERNMSVMSTQY-QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKL---NL 331
L ++ R+MS Q Q + T R E + + ++ F ELQ+ L +
Sbjct: 114 LGEIDSLARDMSSRRGQLEQLRATNR----EREDRFRNEGREDFEESSEELQAHLVDSDR 169
Query: 332 FKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHK----KLNDT 387
++C+ LE + +++ ++E + H + ++ G+L + H + +
Sbjct: 170 VAAGKQQRCTALERE--VEAARSRKEAMAAQHQRDC-LRHGQLAGEAANHASNVAERDRA 226
Query: 388 LKTKLNNLADTLCL--DTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENT 445
++ LA L + + TA ++ EG + T + + ++ L NE
Sbjct: 227 IRATAVALALPLPMQGEQTADGSFSSAAAEGFCREVATRVQELEGRVRALRADARTNEGR 286
Query: 446 KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV 505
+ ++A + + ++ + Q+E N+ ++N QI ++ + + L+ R
Sbjct: 287 LSSAVDAATAQLARAQEGLRLKRVQLEDNRNAISNCGAQIQGSQFTEVSARALREDAERA 346
Query: 506 NS-------EIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAE 558
E + + + E+EA R+ +EL E A + +
Sbjct: 347 EELYRRKQMEESSSDAARQVEAARQEVEAATRRMSELRAERQRAAAAAEGSARLRLKRTD 406
Query: 559 IKSLKNRKESKLADINLLKERHD--RAFHL-LFDMIPEEN-FKNSLDKALSSITFD---- 610
++S KE +L+ + + R D +A L + +P + + L + +
Sbjct: 407 LES----KEEQLSKV-VAARRLDLTKALALPAGEALPAPGALRARAEGVLGRLRGEEADH 461
Query: 611 INRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPF-EDELDRV 669
+ QE A E L A S+ D +R EL M +G E+E +
Sbjct: 462 LRASQEAHRAAETAKSALTARRGEVSRCQADMERLRGELRHGMAAAVGEVGVSEEEYNNK 521
Query: 670 TLELK----REQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLK 725
+ ++ R + + ++ + LF Y + N CPLC R F S+ + +
Sbjct: 522 IVTMQQVEDRRRNRLGKCSAMETLFKEYRETVN-NGGDCPLCCRGF-SEPERRVCLRHID 579
Query: 726 TKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVI 785
++K +P+ + + + QL +Q +L+ L+P + ++ D LR+K
Sbjct: 580 EEMKILPKSIEDCQFALQQLQRQLEALRALQPAW---VRYND-----LRAK--------- 622
Query: 786 ETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISG---- 841
+ + E + + A++ Q D + + ++EL + E+ +++G
Sbjct: 623 -LPQLQQAEQQLQEQVEELSEKAMAAQMDYAEVHERVKELTRINSEVVWHVDRLAGEAEV 681
Query: 842 MRSTGVDLDQVLAQQKE--KKNELNTFRSKIESGQTRLN-SHNEKLQSLQKQKNDIHSKQ 898
+R LD A +E++T +E+ + R + + + + + +++ +
Sbjct: 682 LRKEIAVLDPAAATAPAGCSVSEIDTELEAVEAARQRAELARDGAMARVNRYRDE---RA 738
Query: 899 LTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHK 958
L + L+ + ELE ++V + EL + P+ET+ + + D ++ +
Sbjct: 739 LEAAAAVNRVNELQSKIQELEAANTVLEQELRAAAGNLGPLETERDSLLRQRDEARQRAQ 798
Query: 959 KKLNE-----EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKED 1013
+++ E GA++ + QL + R+ + Y RG +LA + ++ R E+
Sbjct: 799 REVTEAEEQLRGAQL--HLSQLLDKARV---VSEYEARGRGAELARMGSELEAAQGRIEE 853
Query: 1014 IIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMIS--- 1070
E + + Q + + D+ + L + ++A L EL E ++
Sbjct: 854 QGRVLAAKEEELTALRQELVADAALRRDVVDVLDMRSSRKAEEDLATELAAMEARVAQVG 913
Query: 1071 DLTKYHHTLENC------------VIKYH----------------SQKMRSINRLIREYW 1102
D H + V++ H K R I + ++
Sbjct: 914 DPGSLHRQATSLAEQRDALRSQQDVLRGHIAAAQQAAARAQAELNDPKYRDIQQ---RFY 970
Query: 1103 TRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI 1162
++ +K +E+ +SDL KY+ LE ++ +H+ KM IN++I+E W + Y+G DIDYI I
Sbjct: 971 SQQVTVKTTEMAMSDLDKYYKALEKALLVFHTTKMADINKIIKELWQKTYRGQDIDYIQI 1030
Query: 1163 AADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIV 1221
AD G G+ R+YNYRVV E +MR RCSAGQ+VLACLIIRL +++ +
Sbjct: 1031 KADTEGAGA---RSYNYRVVMYSGSAELEMRGRCSAGQKVLACLIIRLALAETFCLNCGI 1087
Query: 1222 ITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNF 1281
+ DE NL A + A + R + K+L E+ S Q+NF
Sbjct: 1088 LALDEPTT-NLDAENSASLARAL---KSLMESR---------------------SGQENF 1122
Query: 1282 QLIVITHDEEFIE 1294
QLIVITHDE F +
Sbjct: 1123 QLIVITHDENFAQ 1135
>gi|226289954|gb|EEH45438.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb18]
Length = 1299
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 302/1352 (22%), Positives = 588/1352 (43%), Gaps = 203/1352 (15%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG
Sbjct: 30 IDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNG-------------------------- 63
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
SGK G+K E A VKL + RSL L+
Sbjct: 64 -----------------SGKTLC-----GEK-EVLAQVKLSFKSITGAKMVATRSLQLTV 100
Query: 124 KNGKDNCATRDTTISRKIFAT--GVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQE 181
K A + T+ ++ G + ++ E M +GVSKAIL++VIFCHQ+
Sbjct: 101 KKN----ARQQKTLEGQLLMIKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQD 156
Query: 182 NSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEA 241
S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K A
Sbjct: 157 ESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELAKYKIMEQHAKENKDRA 216
Query: 242 DSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQL-TEKERNMSVMSTQYQTKKTER 300
D ++ ++ + E H + + M+ E + E E + ++ T + K+ E
Sbjct: 217 DRAEKRSIKLQEEIEALRAESHELSKEMRRAAELADKAWKESESYVQILGT-LEGKRIEA 275
Query: 301 DMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI---QEE 357
IQ S + L+ + ++ D+ L+ L F+ ++ + E +E LK +Y+ Q
Sbjct: 276 KSIQTSISNLQQHLVEVDESDEW-LERALEQFE---SKQAQDREQEESLKQKYVDLRQLI 331
Query: 358 KQSHTHINEAQMKLGKLERDE---ETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
+ + + Q + GK E D+ E K + L ++ D +
Sbjct: 332 EDNRAKLGLKQAEYGKHENDKAQFERQLKRQEKLIKEIARQNSIRGFDDDLDDMQVNDFM 391
Query: 415 EGLIKMSQ---TTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQI 471
+ + K+S+ +++ + ++ +R Q+ +N L K L+ + ++QI
Sbjct: 392 QRIRKLSKDQNQALERARREAQVEQR-------EAQSLLNQLGQRKSALQEVKNAARKQI 444
Query: 472 EGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQ 531
N + + +++E+ + VL++++ +++ + I++ +
Sbjct: 445 TSNDHEADSYQRRLDEIEIDEGDKAVLESRIEETERSLNEAKGKAKAASWDSAIQSTTAE 504
Query: 532 RNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMI 591
LEDE ++AE+ + LA + LK + + + +K H + +
Sbjct: 505 IRLLEDESSKLNAELIEGTKRAGDLARLDHLKRELKDRERSLETMKGAH---AERIKKFV 561
Query: 592 PEENFKNSLDK----ALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLA 647
+E ++LD+ AL + T + ++ + + K + L + + + K L ++ L
Sbjct: 562 TQEWSPSTLDQEYQTALEAATNALTHVERERDGKCRELEHTDFKLKTTRKDLLQKRNELK 621
Query: 648 ELMDRMELVLGSKP--FEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR- 703
+ ++++ + +P + D L + ++L +++ + QY Y+ K + +
Sbjct: 622 QCIEKIRDSVNDEPEEYPDILKQRQVQL-----DMAKKDADQYAGLGDYLSKCMDAARQK 676
Query: 704 --CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYEN 761
C +C+R F+++ +NKL +K + ++ + QL + + Q Y +
Sbjct: 677 KVCRMCSRPFKTEGEFQIFLNKLDALVKRATQDAADE--SLRQLEEDLEAAQSASTFYGS 734
Query: 762 IMKLQDTDIPSLRSKLIELE-------------ENVIETKGELKKLKTALETPKTKEKTA 808
++L +T+IP+L + +LE + ++ + ELKK +E+ T
Sbjct: 735 WVRLSNTEIPALEKEEAKLESQREDLLSQIEDHDKIVSKRAELKK---DVESLSKTVATI 791
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS-TGVDLDQVLAQQKEKKNELNTFR 867
++ +L I+EL+T Q+++ M S T D+ + L++ EK EL
Sbjct: 792 SKYDSEIGILRSQIQELSTNQQDV---------MSSRTLEDIQEQLSEIGEKSRELQKVI 842
Query: 868 SKIESGQTRLNSHNEKLQ-SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQ 926
SK+ S + + + L+ L+ ++++ + ++ A ++ +E E +++ +
Sbjct: 843 SKLSSEKDQSRTEITTLELKLRDVRSNLGNANHQLEKKANLIARVE----EYRNLNAKQR 898
Query: 927 TELEELGRKVAPIETQLNLAQSELDALK---KEHKKKLNEEGAKIQDYTKQLEEVKRIKL 983
+E+ R + + +++ AQ+ D + + +K+L +E +++ D QL
Sbjct: 899 ESIEKADRDIDNLVPEVSKAQARYDDISSRAERREKELQQEASQLSDSLHQLNLANE--- 955
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLK 1043
EI +Y +R QL+ + V + ++ ++G + INEI+ + + +
Sbjct: 956 EITSYIERDGPAQLSRCEKEVCSIEMEIANLEKEQGSITKEINEISIRLKDSESTKRQYA 1015
Query: 1044 NNLTLLEKKEAVAKLN---EELKLSEIMISDLTKYHHTLE------NCVIKYHSQKMRSI 1094
+NL ++ A+ +N EEL + D +++ E N + + KM +
Sbjct: 1016 DNLRYRQETAALEDVNTTIEELTAQNAEV-DRSRFKEESERRTREHNALSAKQASKMGEM 1074
Query: 1095 ----NRLIR--EYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
++L++ W Y +++ ++ + DL +Y L+ ++KYHS K
Sbjct: 1075 KSKDDQLMQLLADWNTDYKDAGPKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLK 1134
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCS 1196
M INR+I E W + Y+G D+D I I +D ++ R+YNYRV K E DMR RCS
Sbjct: 1135 MEEINRIIEELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQDAEMDMRGRCS 1193
Query: 1197 AGQRVLACLIIRLFISD---------------------------------------QKNF 1217
AGQ+VLA +IIRL +++ Q NF
Sbjct: 1194 AGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRSRQQQSNF 1253
Query: 1218 QLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
QLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1254 QLIVITHDEEFLRHMKCGDFSDYYYRVSRNER 1285
>gi|209946182|gb|ACI97322.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 206 bits (525), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 189/676 (27%), Positives = 323/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + Q +I+ L + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRXXQVKIDELRIXLXXSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ +I ++ S L+ L+ ++N+VN + +K++D +K+ I E +
Sbjct: 439 XXETLXVEIKKIETSMQDLKKLEKEINQVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVXXKLRREIQELNEKANTQKLKEQSYEIKRKN---LINDISRMEKELKDSEEL 614
Query: 656 V---LGSKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946174|gb|ACI97318.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 206 bits (525), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 189/676 (27%), Positives = 324/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRXXXVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|358331647|dbj|GAA50423.1| DNA repair protein RAD50 [Clonorchis sinensis]
Length = 1112
Score = 206 bits (524), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 230/916 (25%), Positives = 391/916 (42%), Gaps = 164/916 (17%)
Query: 459 ELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
E S+I S K+++E K +VI+Q+ V +T+L + DQL S +
Sbjct: 195 ETRSEITSLKRRVENAK----SVISQMESV----------RTELLNAEAHADQLCTSCEL 240
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKE 578
+ + ++ R E L +D +I+ LQ + ++ L+ + SK ++
Sbjct: 241 EDTREQLRHLSEVRKATEQSLLALDEKIATLQQNSSQRQQLDVLRKDRNSKFESARKIRS 300
Query: 579 RHDRAFHLLFD------MIPEENFKNSLDKA---------------------LSSITFDI 611
RH A +F +I E + +LD++ LSS+
Sbjct: 301 RHLEALEQVFGTNSVPTIISEADIAVALDRSKGRAQQTTTMQDRLRHSFLTRLSSLEQST 360
Query: 612 NRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTL 671
++ + E+ LE + L+ +++ ++ +R+ GS E L ++
Sbjct: 361 REARKRLAKYEQDKSVLETKAKFTRSQLQGKQKQADQMAERILSAAGSADLEQCLSKLQQ 420
Query: 672 ELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEI 731
K +EE + + YL++ + +L ++P CP+C R L+ +L +I+ +
Sbjct: 421 RRKLLEEECANEQGSLYLWSKFRDRLARSDPDCPVCHRQLSDRSEQDELLAELDQRIESM 480
Query: 732 PEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGEL 791
P + KK + QL Q +L EL+P+Y + L++TDIP+L ++L EN+ +
Sbjct: 481 PGEFERKKVELAQLVTQHETLLELRPIYSELEHLRNTDIPALEAQLNTELENLQTARDNS 540
Query: 792 KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQ 851
++ LE E A S+QGDL + ++ ++ L ++ R +++ SG G +
Sbjct: 541 EQETARLEACHADEALARSIQGDLAVFERMENDIIELSGKIARLQAE-SGETVEGSETMD 599
Query: 852 VLAQQKEKKNELNTFRSK---IESGQTRLNSHNEKLQSLQKQKND-IHS-----KQLTVQ 902
L Q+E++ T R K + S T+L ++L Q+ D +H +L +
Sbjct: 600 AL--QEERR----TLRDKQISVTSEMTKLQDCVQQLDEAQRDATDTVHRIKDNLHKLEQE 653
Query: 903 GGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQL-NLAQSELDALKKEHKKKL 961
A + L D L + Q L+EL P Q ++A SE A +K+L
Sbjct: 654 NQANL--RLTDDIARLSDTEKQLQKRLQELESHELPKAKQAKHIAVSERTAGSATREKEL 711
Query: 962 NEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVC 1021
E K + +V + + +K G+ +LA L++ + L Q +I GV
Sbjct: 712 EESAEKTGKLRDLIRQVDQACAAVSTASKVGSKHKLAQLQQQLTNLEQ---NIAHLHGVA 768
Query: 1022 ERTINEIN---QSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK-LSEIMIS------- 1070
ER ++ Q + + + +L + + L + + + +L ++ LS + S
Sbjct: 769 ERNTKDLEIARQQVHEHKIRQRELTDCVQLRQLRSQMGQLTLRIEDLSNRLASCHSVTGT 828
Query: 1071 --DLTKYHHTLENCVIKYHSQKMRSINRLI---------------------REYWTRIYQ 1107
DL + L + + ++K N+L REY +YQ
Sbjct: 829 DQDLVQETKRLSSEEERLQAEKHAVTNQLGQLTAKLQYLERDLKEKYAESDREYLDMMYQ 888
Query: 1108 LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI----- 1162
LK +E+ SDL +Y++ L+ ++ YH+ KM +N++IRE W Y+GNDIDYI I
Sbjct: 889 LKTTELACSDLERYYNALDRAILAYHAAKMSDLNKIIRELWRSTYRGNDIDYIEICSEEE 948
Query: 1163 -AADVGTGSEKRRTYNYRVVQKK--NGIEQ--------------------DMRNRCSAGQ 1199
A + RRTYNYRVV K G+ DMR RCSAGQ
Sbjct: 949 AATAASNATRSRRTYNYRVVMVKATGGVAAPTASSRAAKSKLVQSYEARLDMRGRCSAGQ 1008
Query: 1200 RVLACLIIRLFISD---------------------------------------QKNFQLI 1220
+VLA LIIRL +++ QKNFQLI
Sbjct: 1009 KVLASLIIRLALAEVFCLHCGVLALDEPTTNLDRENIESLAYALVEIIKSRKQQKNFQLI 1068
Query: 1221 VITHDEEFIENLTAID 1236
VITHDE+F+E L D
Sbjct: 1069 VITHDEDFVELLGRSD 1084
>gi|209946192|gb|ACI97327.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 189/676 (27%), Positives = 322/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I +E + +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKH-CEITEIEEQNEKADRXXXVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETXXVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LINDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|209946196|gb|ACI97329.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 188/676 (27%), Positives = 322/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I +E + + +I+ L + + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKH-CEITEIEEQNEKADRSXXVKIDELRIXXXKSEQXVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETXXVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LINDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|308798817|ref|XP_003074188.1| DNA repair-recombination protein (ISS) [Ostreococcus tauri]
gi|116000360|emb|CAL50040.1| DNA repair-recombination protein (ISS) [Ostreococcus tauri]
Length = 1313
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 244/906 (26%), Positives = 400/906 (44%), Gaps = 190/906 (20%)
Query: 486 NEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAE 545
N VN+S ++ L+ ++NR N SKS Q+K ++E ++E L I+ E
Sbjct: 466 NAVNES--AIEELENRVNRANEAYASKSKSDFASQMKVDME-------KVEINLSDIERE 516
Query: 546 ISILQAQ--NITLAEIKSLKNR--KESKLADIN----LLKERHDRAFHLLFDMIPEE-NF 596
I+ L+A+ N A +K R KE A N +++ R ++ + +P
Sbjct: 517 INKLRAEQENAVQAGESEMKIRMKKEELFAKKNSLENIVEHRSEQLRDVFGAAMPMNIEM 576
Query: 597 KNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTL-----AELMD 651
K++L + L + + + QE +NA + LE ++ + L +R+L E +D
Sbjct: 577 KDALVEKLDELNELVAKAQEQLNASSSRVAVLEHEIAVAKTELESNRRSLNDVIALETID 636
Query: 652 RMELVLGSKPFE---DELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCT 708
VLG+ F + L+ V E+ + +++ +TS Q LF+ ++ + E+N+ C LC
Sbjct: 637 ANAQVLGAGGFAGYANALEAVNREVGDVEAQLTQLTSLQNLFSKFVAEAEKNQS-CSLCK 695
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQT-----------NNKKTHID--QLCKQQRSLQEL 755
R F S S + ++ + ++P Q +K +D + Q ++L E
Sbjct: 696 RGFPSAESTDSFIQDMQQNMAKVPAQIAVIEERVEKTRERRKLLLDLSEAASQFKTLSEK 755
Query: 756 KPVYENIM--------------KLQDTDIP------SLRSKLIELEENVIETKGELKKLK 795
P E + KL + +I S+ ++E N+ E++ L+
Sbjct: 756 VPDSERLFAELEVSFATARETEKLCEKEIAEKRQSASVVGSIMEDAGNISRLAKEVQALQ 815
Query: 796 TALETPK-------TKEKTALSLQGDLTLLD----QNIRELNTLQRELERQESKISGMRS 844
A+E + + ++ L + DL +LD RE L + ER E ++ +
Sbjct: 816 DAVEALQLNVVNVTGETRSTLDISNDLEMLDVKREAADRERGILLKRKERHEMELLNLER 875
Query: 845 TGVDLDQVLAQQK---EKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTV 901
DL + L K EK+ +L +KI S ++++ + ++L V
Sbjct: 876 NARDLREELLLTKSRGEKRTQLKAEMAKISEAIAMGASEKQRMEE-ELAPGLAEKERLAV 934
Query: 902 QGGAGMLKSLEDRKCELEGMDSVYQTELE----ELGRKVAPIETQLNLAQSELDALK--- 954
+ +R+ E+ G + Q+ELE EL R V + +N A + DA
Sbjct: 935 E---------RERQREMHGQE---QSELEIDIRELQRLV-DVTAGMNKAIDQADAAGISD 981
Query: 955 --KEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKE 1012
EH K L E KI+D +L+ R K QL A KE
Sbjct: 982 RLAEHTKSLEETNGKIEDLGTKLQ--ARAK-------------QLKA-----------KE 1015
Query: 1013 DIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE---AVAKLNEELKLSEIMI 1069
++IA++ +R + + + + EE LK+ L+E+ +A + ++L+L++
Sbjct: 1016 EVIARQNDLKRELEDNIAFLRGKREEETILKDIEELVEQMHNMGQMADVEKKLRLAQGSK 1075
Query: 1070 SDLTKYHHTLENCVIKYHSQKMRSIN---------RLIREYWTRIYQLKLSEIMISDLTK 1120
+DL + +K H + M+S + + + ++ +LK E++ DL +
Sbjct: 1076 NDL-RTEAAEAQGRVKAHQEAMKSASDQLNGAAYVNIDKRLSKQLVELKTVEMVSDDLDR 1134
Query: 1121 YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRV 1180
YH L+ ++ +H+ KM IN+++RE W R Y+G DID I I +D T + R +YNYRV
Sbjct: 1135 YHKALDKALMSFHASKMEEINKVVRELWQRTYRGQDIDSIQIRSDSETTT-GRSSYNYRV 1193
Query: 1181 VQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYV 1240
V G E +MR RCSAGQ+VLACLIIRL
Sbjct: 1194 VMLCGGAELEMRGRCSAGQKVLACLIIRL------------------------------- 1222
Query: 1241 VRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNAS--------------DQKNFQLIVI 1286
ALAETF NCGI ALDEPTTNLD N+ DQ+NFQLIVI
Sbjct: 1223 --------ALAETFCLNCGILALDEPTTNLDAPNSDALARSLIEIMKSRRDQENFQLIVI 1274
Query: 1287 THDEEF 1292
THD EF
Sbjct: 1275 THDMEF 1280
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 119/217 (54%), Gaps = 26/217 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +D+L I GIR+F D V++F +PLTLIVG NG GKTT+IEC+K T E P A
Sbjct: 1 MCTVDKLLIKGIRSFSPDNEHVIQFPKPLTLIVGRNGAGKTTVIECLKMGSTGELPPSAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG+ F+HDP++ E A +KL+ V+RS
Sbjct: 61 SGQAFIHDPKVADVTEVKAQ--------------------IKLRFRNVTGKPFVVIRSFQ 100
Query: 121 LSNK-NGKDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
L+ K GK D+ I + + A G V + C+ + E+ L+GVSKAIL NV+F
Sbjct: 101 LTQKARGKLEKKDLDSVI-QSVDANGKMVSISKKCVDINA--EVPALMGVSKAILENVVF 157
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
HQE S+WPL + +K+ FDEIF ATKY KALE I+
Sbjct: 158 VHQEESNWPLGDSAGLKKKFDEIFSATKYTKALEHIR 194
>gi|453086676|gb|EMF14718.1| DNA repair protein rad50 [Mycosphaerella populorum SO2202]
Length = 1307
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 350/1428 (24%), Positives = 595/1428 (41%), Gaps = 285/1428 (19%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+ +L I GIR+F + F+ PLTLIVG NG GKTTIIEC+K+ E P
Sbjct: 7 VQKLSICGIRSFSHKDTMAIEFKAPLTLIVGMNGSGKTTIIECLKYVTAGEVP------- 59
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
+ ++G++FVHDP++ + E A VKL T + + RSL ++
Sbjct: 60 -------------PNCANGQSFVHDPKMSGEKEVMAQVKLLFTSTEDVRMVCSRSLSVTV 106
Query: 124 KNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENS 183
K T + +I ++ G + + E M +GVSKAIL NVIFCHQE+S
Sbjct: 107 KKDSRTFKTLEGSI--RMQKGGERNVISSRVAEMNTAMPRFLGVSKAILENVIFCHQESS 164
Query: 184 SWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADS 243
WP+ K +K IFD IF+A KY KA+E+IK+ + R+E+ +K Q + K + +
Sbjct: 165 LWPMSAPKDLKIIFDTIFEAHKYTKAIENIKVLQKNKRQELVVLK---QGEDHAKADNEK 221
Query: 244 KKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT---EKERN----MSVMSTQYQTK 296
K+L Q+ ++ ++ + + E I +K+ + EK N +SV+ + K
Sbjct: 222 AKRL----KQQEERLLQQCNKLNEQSAAIEKKIREAQREWEKVSNQLGEVSVVVGELHGK 277
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKL--NLFKINLDEKCSELENQERLKSQYI 354
+ ER +ES L ++ +L D+ +LQ L + +I + E+ E QER K Y
Sbjct: 278 RIERQTKEESVKILRENLDELEESDE-DLQRMLEQHAERIGIYEQ----ELQER-KKDYA 331
Query: 355 QEEKQSHTHINEAQMKLGKLERD---EETHKKLNDTL----------KTKLNNLADTLCL 401
+E + A+ + ER+ E K ND +L+++ T +
Sbjct: 332 DKE----AELGNARKQQSNRERECGTYEAEKSSNDRQVETRNRMILDAARLHDIWTTDTV 387
Query: 402 DTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIV--EKVE 459
D + S++ E + K ++ K+ ER +++ Q + L E++
Sbjct: 388 DDESASKFMKE----VTKAAKNQQIKF-------ERVRAEHLEKVQDQQKVLTAYNERIS 436
Query: 460 -LESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDP 518
L+S +++QQIE + + ++ Q N++ + + L+ + ++ L
Sbjct: 437 GLKSSKVAYRQQIEAYDRKIRSIQAQRNDLPADEGSKATLEAQFKEAQDKLQTAKADLAN 496
Query: 519 DQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLL-K 577
+ +IE + LED+ +DAE +S ++ A ++ + K
Sbjct: 497 ATWEVDIERATAELRRLEDQRDRLDAE--------------QSEAAQRAGDSAQLDFIHK 542
Query: 578 ERHDRAFHLLFDMIPEENFKNSLDKALS------SITFDINRIQEDINAKEKHLYTLE-- 629
E DR L D + + + KN LD + ++ R Q+D ++ K L
Sbjct: 543 ELQDRRRSL--DTMIKAHTKN-LDATVGGGWTVKTLEAAFQRAQDDSMSQVKDAQGLRDE 599
Query: 630 --ANVSNSSKTLRDQKRTL---------AELMDRMELVLGSKPFEDELDRVTLELKREQE 678
S +LR++K L AE D + + KP EL V EL+ ++
Sbjct: 600 SVRRAETKSTSLRERKDALEAKQHEVQAAE--DEVYRLAECKP--SELSDVIAELEESRD 655
Query: 679 EVSMMTSTQYLFNSYIGKL---EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQT 735
E+ T + L Y+ + EN C C R + + L+ +K + ++
Sbjct: 656 ELKQNTDSLGLVQKYLEQCISDAENGHFCRTCARSVSAGPELETLLRTVKAQQQKYVAPV 715
Query: 736 NNKKTHIDQLCKQQRSLQELKPVYENI---MKLQDTDIPSLRSKLIELE-------ENVI 785
+N++T L + +L K + +L +IP+L+ + +LE E V
Sbjct: 716 DNEET----LAENIEALDNAKKASTYVDTWERLTQKEIPALKDDIRQLEQDSRKLSEEVA 771
Query: 786 ETKGELKKLKTALETPKTKEKTA---LSLQGDLTLLDQNIRELNT------LQRELERQE 836
+ +K++++ T +KT +SL + I+EL L R LE +
Sbjct: 772 DRNMVVKEVESTQRDVGTHKKTVEKIISLSQQIETFQHQIKELAAKQESAGLSRGLEAIQ 831
Query: 837 SKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ---KQKND 893
+ I + DL +A+Q N + ++ I + + +++ N +L+ ++ KQK
Sbjct: 832 ADIKKADNKRKDL---VAEQSAATNARDRKKTAISALELEISNVNGELRRVEYNLKQKTA 888
Query: 894 I--------HSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT---ELEELGRKVAPIETQ 942
+ SK Q G+ LE L +Y+ +E R+ +
Sbjct: 889 LAEQEQEQKDSKSDAQQHVRGIDIKLEAENSGLNTQQEIYRDITRRGDEADREQQEKANK 948
Query: 943 LNLAQSELDALKKEHKKKLNEEG----AKIQDYTKQLE-EVKRIKLE------------- 984
LN ++L+++ ++ K L+ G A+ Q+ + E EV RI+ E
Sbjct: 949 LNNTVNKLNSVVQDIKAYLDRGGDGQLARAQEAQRSAEAEVARIQSEQRHIIADIKELEQ 1008
Query: 985 ------------ILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTI-----NE 1027
+ N R QL A++ + +L R + A R +R + NE
Sbjct: 1009 RIGTYAGMKRSIVDNQRFRRDFRQLEAVQADIAELEARGAEADASRLNKQRELWKDRRNE 1068
Query: 1028 INQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEE-------LKLSEIMI-------SDLT 1073
+ A E L LT EA A E + + IM+ +DL
Sbjct: 1069 LASDQAGVIGELKGLDRELT-----EAQALYQSEYNDAGKKYQAAHIMVETTKAAINDLG 1123
Query: 1074 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYH 1133
Y L+ ++K+H+ KM IN++I E W + Y
Sbjct: 1124 LYWGALDKAIMKFHTLKMEQINQIIDELWRQTY--------------------------- 1156
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK-RRTYNYRVVQKKNGIEQDMR 1192
G D+D + I ++ G+ + ++YNYRVV K E DMR
Sbjct: 1157 -------------------MGTDVDTVLIRSEGVDGTARGNKSYNYRVVMVKQDTEMDMR 1197
Query: 1193 NRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAE 1252
RCSAGQ+VLA +IIRL ++D Q +I DE T +D + + +AL +
Sbjct: 1198 GRCSAGQKVLASIIIRLALADVFGQQCGMIALDEP----TTNLD-------INNIRALGK 1246
Query: 1253 TFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAID 1300
+ S IK Q NFQLIVITHD +F++ + D
Sbjct: 1247 SLSEI--------------IKIRRGQANFQLIVITHDVDFLQYMNCGD 1280
>gi|209946180|gb|ACI97321.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 187/674 (27%), Positives = 323/674 (47%), Gaps = 76/674 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMDELKIKEANIKVEAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + + Q +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRSXQVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N++N + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINQINELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 V---LGSKPFEDEL 666
+ P++D L
Sbjct: 615 IYQKCXXTPYDDLL 628
>gi|209946178|gb|ACI97320.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 188/676 (27%), Positives = 322/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F +TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSXVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ + E+ + Q +I+ L +E + E + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEXXEQN-EKADRXXQVKIDELRIELTKSEQSVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ + +I ++ S L+ L+ ++N VN + +K++D +K+ I E +
Sbjct: 439 ESETLGVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ S P++D L+R
Sbjct: 615 IYQKCRSTPYDDLLER 630
>gi|295661183|ref|XP_002791147.1| DNA repair protein rad50 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281074|gb|EEH36640.1| DNA repair protein rad50 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1280
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 302/1321 (22%), Positives = 574/1321 (43%), Gaps = 229/1321 (17%)
Query: 42 TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIV 101
TIIEC+K+A T + P S G F+HDP+
Sbjct: 29 TIIECLKYATTGDLPPN---------------------SKGGAFIHDPK----------- 56
Query: 102 KLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEM 161
+ LL K+G+ T+IS ++ L Q M
Sbjct: 57 ------------KTLEGQLLMIKDGER------TSISSRV---------AELDQI----M 85
Query: 162 CNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLR 221
+GVSKAIL++VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R +
Sbjct: 86 PQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQN 145
Query: 222 KEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQL-T 280
+E+ + K Q K +AD ++ ++ + E H + + M+ E +
Sbjct: 146 EELAKYKIMEQHAKENKDKADRAEKRSIKLQEEIEALRAESHELSKEMRRAAELADKAWK 205
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
E E + ++ T + K+ E IQ S + L+ + ++ D+ LQ L F+ ++
Sbjct: 206 ESESYVQILGT-LEGKRIEAKSIQTSISNLQQHLVEVDESDEW-LQQALEQFE---SKQA 260
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+ E +E LK +Y+ I + + KLG + + H+ + +L
Sbjct: 261 QDREQEESLKQKYV----DLRQLIEDNRAKLGLKQAEYGKHENGKAQFERQLKRREK--L 314
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIK--------ILERTFSD---NENTKQAE 449
+ A+ G+ L M ++ ++ I+ LER + + Q
Sbjct: 315 IKEIARQNSIRGFGDDLDDMQ---VNDFMQRIRKLSKDQNQALERARREAQVEQREAQTL 371
Query: 450 INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEI 509
+N L K L+ + ++QI N ++ +++E++ + VL+++ I
Sbjct: 372 LNQLGQRKSALQEVKNAARKQITSNDREADAYQRRLDEIDIDEGNKAVLESR-------I 424
Query: 510 DQLSKSLDPDQLKNEIEAW---IRQRNE----LEDELCVIDAEISILQAQNITLAEIKSL 562
++ +SL+ + K ++ +W I+ + E LEDE ++AE+ + LA + L
Sbjct: 425 EETERSLNEAKDKAKVASWDSAIQNKTEEIRLLEDESSKLNAEVIEGTKRAGDLARLDHL 484
Query: 563 KNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDK----ALSSITFDINRIQEDI 618
K + + + +K H + + +E ++LD+ AL + T + ++ +
Sbjct: 485 KRELKDRERSLETMKGAH---TERIKKFVTQEWSPSTLDQEYQTALEAATNALTHVERER 541
Query: 619 NAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKP--FEDELDRVTLELKRE 676
N + L + + + K L ++ L + ++++ + +P + D L + ++L
Sbjct: 542 NGIGRELEHTDFKLKTTRKDLLQKRNELKQCIEKIRDSVNDEPEEYPDILKQRQVQL--- 598
Query: 677 QEEVSMMTSTQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIP 732
+++ + QY Y+ K + + C +C+R F+++ +NKL +K
Sbjct: 599 --DMAKKDADQYAGLGDYLSKCMDAARQKKVCRMCSRPFKTEGEFQIFLNKLDALVKRAT 656
Query: 733 EQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL---RSKL----------IE 779
++ ++ ++ QL + + Q Y + ++L +T+IP+L +KL IE
Sbjct: 657 QEAADE--NLRQLEEDLETAQSASTFYGSWVRLSNTEIPALEREEAKLESQREDLLSQIE 714
Query: 780 LEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKI 839
+ ++ ELKK +E+ T ++ +L I+EL+T Q+++
Sbjct: 715 DHDKIVSKHAELKK---DVESLSKTVATISKYDSEIGILRSQIQELSTNQQDV------- 764
Query: 840 SGMRS-TGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQ-SLQKQKNDIHSK 897
M S T D+ L++ E+ EL SK+ S + + + L+ L+ ++++ +
Sbjct: 765 --MSSRTLEDIQGQLSEIGERSRELQKVISKLSSEKDQSRTEITTLELKLRDVRSNLGNA 822
Query: 898 QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALK--- 954
++ A ++ +E E +++ + +E R + + +++ AQ+ D +
Sbjct: 823 NYQLEKKANLIARVE----EYRNLNAKQRESIENADRDIDNLVPEVSKAQARYDDISSRA 878
Query: 955 KEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDI 1014
+ +K+L++ +++ D QL EI +Y +R QL+ + V+ + ++
Sbjct: 879 ERREKELHQVASQLSDSLHQLNLANE---EITSYIERDGPAQLSRCEKEVRSIEMEIANL 935
Query: 1015 IAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLN---EELKLSEIMISD 1071
++G + INEI+ + + + +NL ++ A+ +N EEL + D
Sbjct: 936 EKEQGSITKEINEISSRLKDSESTKRQYADNLRYRQETAALEDVNTTIEELTAQNAEV-D 994
Query: 1072 LTKYHHTLE------NCVIKYHSQKMRSI----NRLIR--EYWTRIYQ---LKLSEIMI- 1115
+++ E N + + KM + ++L++ W Y+ LK E I
Sbjct: 995 RSRFKEESERRTREHNALSAKQASKMGEMKSKDDQLMQLLADWNTDYKDAGLKFKEAHIK 1054
Query: 1116 --------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG 1167
DL +Y L+ ++KYHS KM IN +I E W + Y+G D+D I I +D
Sbjct: 1055 VETTKAAVDDLGRYGSALDKAIMKYHSLKMEEINCIIEELWQKTYRGTDVDTILIRSD-N 1113
Query: 1168 TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD-------------- 1213
++ R+YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1114 ENAKGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEP 1173
Query: 1214 -------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDH 1247
Q NFQLIVITHDEEF+ ++ D + Y R+ R+
Sbjct: 1174 TTNLDRDNIRSLAESLHDIIRSRQQQSNFQLIVITHDEEFLRHMKCGDFSDYYYRVSRNE 1233
Query: 1248 K 1248
+
Sbjct: 1234 R 1234
>gi|225682548|gb|EEH20832.1| DNA repair protein rad50 [Paracoccidioides brasiliensis Pb03]
Length = 1292
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 308/1396 (22%), Positives = 594/1396 (42%), Gaps = 232/1396 (16%)
Query: 11 GIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPR 70
+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 13 SVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN------------ 60
Query: 71 IGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNC 130
S G F+HDP++ + E A VKL + RSL L+ K
Sbjct: 61 ---------SKGGAFIHDPKLCGEKEVLAQVKLSFKSITGAKMVATRSLQLTVKK----T 107
Query: 131 ATRDTTISRKIFAT--GVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLD 188
A + T+ ++ G + ++ E M +GVSKAIL++VIFCHQ+ S WP+
Sbjct: 108 ARQQKTLEGQLLMIKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMS 167
Query: 189 EGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLI 248
E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +AD ++
Sbjct: 168 EPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELAKYKIMEQHAKENKDKADRAEKRS 227
Query: 249 YNNTQKRDQSFEELHNIEESMKPINEKLVQL-TEKERNMSVMSTQYQTKKTERDMIQESC 307
++ + E H + + M+ E + E E + ++ T + K+ E IQ S
Sbjct: 228 IKLQEEIEALRAESHELSKEMRRAAELADKAWKESESYVQILGT-LEGKRIEAKSIQTSI 286
Query: 308 NELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI---QEEKQSHTHI 364
+ L+ + ++ D+ L+ L F+ ++ + E +E LK +Y+ Q + + +
Sbjct: 287 SNLQQHLVEVDESDEW-LERALEQFE---SKQAQDREQEESLKQKYVDLRQLIEDNRAKL 342
Query: 365 NEAQMKLGKLERDE---ETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMS 421
Q + GK E D+ E K + L ++ D + + + K+S
Sbjct: 343 GLKQAEYGKHENDKAQFERQLKRQENLIKEIARQNSIRGFDDDLDDMQVNDFMQRIRKLS 402
Query: 422 QT---TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDL 478
+ +++ + ++ +R Q+ +N L K L+ + ++QI N +
Sbjct: 403 KDQNQALERARREAQVEQRE-------AQSLLNQLGQRKSALQEVKNAARKQITSNDHEA 455
Query: 479 TNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDE 538
+ +++E+ + VL++++ +++ + I++ + LEDE
Sbjct: 456 DSYQRRLDEIEIDEGDKAVLESRIEETERSLNEAKGKAKAASWDSAIQSTTAEIRLLEDE 515
Query: 539 LCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKN 598
++AE+ + LA + LK + + + +K H + + +E +
Sbjct: 516 SSKLNAELIEGTKRAGDLARLDHLKRELKDRERSLETMKGAH---AERIKKFVTQEWSPS 572
Query: 599 SLDK----ALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
+LD+ AL + T + ++ + + K + L + + + K L ++ L + ++++
Sbjct: 573 TLDQEYQTALEAATNALTHVERERDGKCRELEHTDFKLKTTRKDLLQKRNELKQCIEKIR 632
Query: 655 LVLGSKP--FEDELDRVTLELKREQEEVSMMTSTQYL-FNSYIGKLEENEPR---CPLCT 708
+ +P + D L + ++L +++ + QY Y+ K + + C +C+
Sbjct: 633 DSVNDEPEEYPDILKQRQVQL-----DMAKKDADQYAGLGDYLSKCMDAARQKKVCRMCS 687
Query: 709 RFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT 768
R F+++ +NKL +K + ++ + QL + + Q Y + ++L +T
Sbjct: 688 RPFKTEGEFQIFLNKLDALVKRATQDAADE--SLRQLEEDLEAAQSASTFYGSWVRLSNT 745
Query: 769 DIPSLRSKLIELE-------------ENVIETKGELKKLKTALETPKTKEKTALSLQGDL 815
+IP+L + +LE + ++ + ELKK +E+ T ++
Sbjct: 746 EIPALEKEEAKLESQREDLLSQIEDHDKIVSKRAELKK---DVESLSKTVATISKYDSEI 802
Query: 816 TLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQV-LAQQKEKKNELNTFRSKIESGQ 874
+L I+EL T Q++ M S ++ QV L++ EK EL SK+ S +
Sbjct: 803 GMLRSQIQELGTNQQDF---------MSSRTLEDIQVQLSEIGEKSRELQKVISKLSSEK 853
Query: 875 TRLNSHNEKLQ-SLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELG 933
+ + L+ L+ ++++ + ++ A ++ +E E +++ + +E+
Sbjct: 854 DQSRTEITTLELKLRDVRSNLGNANHQLEKKANLIARVE----EYRNLNAKQRESIEKAD 909
Query: 934 RKVAPIETQLNLAQSELDALK---KEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTK 990
R + + +++ AQ+ D + + +K+L +E +++ D QL EI +Y +
Sbjct: 910 RDIDNLVPEVSKAQARYDDISSRAERREKELQQEASQLSDSLHQLNLANE---EITSYIE 966
Query: 991 RGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLE 1050
R QL+ + V + ++ ++G + INEI+ + + + +NL +
Sbjct: 967 RDGPAQLSRCEKEVCSIEMEIANLEKEQGSITKEINEISSRLKDSESTKRQYADNLRYRQ 1026
Query: 1051 KKEAVAKLN---EELKLSEIMISDLTKYHHTLE------NCVIKYHSQKMRSI----NRL 1097
+ A+ +N EEL + D +++ E N + + KM + ++L
Sbjct: 1027 ETAALEDVNTTIEELTAQNAEV-DRSRFKEESERRTREHNALSAKQASKMGEMKSKDDQL 1085
Query: 1098 IR--EYWTRIYQ------------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1143
++ W Y+ ++ ++ + DL +Y L+ ++KYHS KM
Sbjct: 1086 MQLLADWNTDYKDAGPKFKEAHIKVETTKAAVDDLGRYGSALDKAIMKYHSLKM------ 1139
Query: 1144 IREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLA 1203
+G+ + DMR RCSAGQ+VL
Sbjct: 1140 ---------EGD-----------------------------QPCKMDMRGRCSAGQKVLL 1161
Query: 1204 CLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL 1263
+ ALAE F NCG+ AL
Sbjct: 1162 ---------------------------------------ALSSRLALAECFGVNCGLIAL 1182
Query: 1264 DEPTTNLD--------------IKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIV 1308
DEPTTNLD I++ Q NFQLIVITHDEEF+ ++ D + Y R+
Sbjct: 1183 DEPTTNLDRDNISSLAESLHDIIRSRQQQSNFQLIVITHDEEFLRHMKCGDFSDYYYRVS 1242
Query: 1309 RDHKGLSDIHLRSLLS 1324
R+ + S I +S+ +
Sbjct: 1243 RNERQKSIIERQSIAA 1258
>gi|111380638|gb|ABH09696.1| RAD50-like protein [Talaromyces marneffei]
Length = 1208
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 275/1206 (22%), Positives = 541/1206 (44%), Gaps = 175/1206 (14%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M +GVSKAIL++VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R +
Sbjct: 47 MPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQ 106
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQL- 279
+E+ + K Q + K +AD ++ ++ + EE H I + M+ + +
Sbjct: 107 NEELAKFKIMEQHSKEDKDKADRAEKRSIKLQEEIEALREETHRISQEMRNAADLADKAW 166
Query: 280 TEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEK 339
E E V+ T + K+ E +Q + + L+ + ++ D+ LQS L F +
Sbjct: 167 KESESYAQVIGT-LEGKRIEARSVQSTIDNLKRHLVEVDESDEW-LQSTLEQF------E 218
Query: 340 CSELENQERLKSQY-----IQEEKQSH-THINEAQMKLGKLERDEETHKKLNDTLKTKLN 393
+LE Q++ +Q I+E+ +S+ + Q ++GK E D++ ++ + +
Sbjct: 219 SRQLEYQQQEDAQKERYMDIKEQIESNRDQLGLKQAEVGKYENDKDQFERQIGRRENMIK 278
Query: 394 NLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNEN---TKQAEI 450
A + + P+ E + +M Q + ++ + LER + ++ Q +
Sbjct: 279 EFARENNIRGFDDTLDEPKIDEFMRRM-QKMVKEH---TQALERARKEGQSEVRETQNVL 334
Query: 451 NALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEID 510
N + K + ++QI N K+ +V +++NE++ + T+ VL+++ V S ++
Sbjct: 335 NQIAQRKSAFKEAKNVARRQISDNDKEAASVQSRLNEIDVDEGTVAVLESQKEEVQSRLE 394
Query: 511 QLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKL 570
+L + +++ + LE+E ++ E+ + LA + +K + +
Sbjct: 395 RLKDVARGAKWDKDLQDANTELRSLENESTKLNQELIAGTKKAGDLARLAHMKKELKDRE 454
Query: 571 ADINLLKERH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLE 629
+ + H DR L+ +N + ++ + + + + + + L +E
Sbjct: 455 RQLETMSGAHGDRLSQLVSAQWSPDNLEREYQNVVADVANSMTLAERNRDGIGRELDQVE 514
Query: 630 ANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTSTQ 687
+ + TL +K+ + + ++ + P E D L + + +++V
Sbjct: 515 FKLKDCRATLEKRKKERDQCLKKIRDAIDDDPTEYLDILQTRQNHMDQTRKDVEQFAGMH 574
Query: 688 YLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
FN + L++ + C C R F+++ + N+L+ IK+ N + + L +
Sbjct: 575 GYFNMCLDALDQKKM-CRTCMRPFKNETEMRTFKNRLEGLIKK------NFSSSDEDLKQ 627
Query: 748 QQRSLQELKPV---YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTK 804
+ + + V Y+ ++L +T IP ELE+N + +G+ K
Sbjct: 628 AEEDYENARMVNTDYDTWLRLTETAIP-------ELEKNEEQFQGQ-------------K 667
Query: 805 EKTALSLQGDLTLLDQNI---RELNTLQR---ELERQESKISGMRSTGVDLDQVLAQQKE 858
E+ L+ T +D+ RE+ +L R + R + +I +RS + +VL++Q +
Sbjct: 668 EEILKKLESHDTTVDERAEKKREIESLSRTVTSIVRIDGEIKSLRSQ---IAEVLSEQPQ 724
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQ-----------KQKNDIHSKQLT---VQGG 904
F +E Q + + EK ++++ + ++D++ +L VQG
Sbjct: 725 -----GDFSRVLEDIQNDIAAIGEKSRAIKLTISKLSSEKDQSRDDLNKAELALRDVQGS 779
Query: 905 -----------AGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDAL 953
G+L +E E + ++ + +E+ R + +E ++ AQ++LD +
Sbjct: 780 LANASHELEKKTGLLARVE----EYKKSNAKQRESIEKADRDIDQLEPEIAKAQAKLDDI 835
Query: 954 KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKED 1013
+ + K E + + ++ ++ EI +Y RG QL R+ ++ + Q +
Sbjct: 836 SRRAEAKERELQQALTRLSDRVNQLNLANDEIKSYIDRGGPEQLNKSRKELENIQQEIKK 895
Query: 1014 IIAKRGVCERTINEINQSIAN------QSLEEIDLKNNLTLLEK-KEAVAKLNEELKLSE 1066
+ ++ R IN+I+ + + Q + I + + LLE+ + + +L E+ +E
Sbjct: 896 LEEQQSETTREINKISAQLKDSDNTRRQYSDNISYRQSCRLLEEVQREIQQLEEQ--NAE 953
Query: 1067 IMISDLTKYHHTLE------NCVIKYHSQKMRSI----NRLIR--EYWTRIY-------- 1106
I D +++ E N + + KM + ++L++ W Y
Sbjct: 954 I---DRSRFKEESERWTRKHNALAAQQASKMGEMKSKDDQLLQLLADWNTDYKDAAANYK 1010
Query: 1107 ----QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI 1162
+++ ++ + DL +Y L+ ++KYHS KM INR++ E W R Y+G D+D I I
Sbjct: 1011 EAHIKVETTKAAVDDLGRYGGALDKAIMKYHSLKMEEINRIVEELWQRTYRGTDVDTILI 1070
Query: 1163 AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------- 1213
+D ++ R+YNYRV K G E DMR RCSAGQRVLA +IIRL +++
Sbjct: 1071 RSD-NENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQRVLASIIIRLALAECFGVNCGLI 1129
Query: 1214 ------------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVR 1242
Q NFQLIVITHDEEF+ ++ D + Y R
Sbjct: 1130 ALDEPTTNLDRDNIRSLAESLHDIIKTRQQQANFQLIVITHDEEFLHHMQCADFSDYYYR 1189
Query: 1243 IVRDHK 1248
+ R+ +
Sbjct: 1190 VSRNER 1195
>gi|348534535|ref|XP_003454757.1| PREDICTED: DNA repair protein RAD50-like, partial [Oreochromis
niloticus]
Length = 1168
Score = 200 bits (508), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 219/838 (26%), Positives = 416/838 (49%), Gaps = 75/838 (8%)
Query: 475 KKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNE 534
+++L N+ ++ + S S LQ L+ KL V E S S++ +LK E+E ++ +
Sbjct: 360 QQELKNITEELQRLQDSSSQLQELENKLAEVEREDAVQSSSVE--ELKAEVEELQEEKAQ 417
Query: 535 LEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEE 594
L+ +D E+ L L ++ LK K I ++ RH F L ++
Sbjct: 418 LDCTQRQLDEEMETLNMHTAALTQMDILKKGKAEMEEQILQIRSRH---FEDLVSLLGHF 474
Query: 595 NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRME 654
K L +SS + +I+ ++ + + L + E N S+ + L +++ LA ++
Sbjct: 475 PNKKELQDWISSKSKEISSTRDRLTKLKMDLASNEQNKSHITAELLKKEQQLATDEEKFL 534
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEEN-EPRCPLCTRFFES 713
V S+ E +L + +L + +++ T+ ++ +I +L E+ +P CP+C R F S
Sbjct: 535 NVCSSRDLEQDLSNLQRDLGEIFKTKALLAGTKVVYTQFISELSEHRKPCCPMCRRSFPS 594
Query: 714 DYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSL 773
+ V +V L++K+ +PE+ + +++ +++ + L+PV E I++ Q+ ++P+L
Sbjct: 595 ESEVQEVVRVLQSKLHLVPEKLKITEQDLERTERRREEIVALRPVREAIVQFQENELPAL 654
Query: 774 RSKLIELEENVIETKGELKKLKTALETPKTKEKTALS-LQGDLTLLDQNIRELNTLQREL 832
R +L ++ KG++++ + L +++E+ A LQG ++L+D +R L ++R++
Sbjct: 655 RKRLQTVDREAERLKGDVEEQEALLTILRSEEEKAKDCLQG-ISLIDSYLRNLEEVERKI 713
Query: 833 ERQESKISGMRSTGVDLD---QVLAQQK-EKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
+ Q +K+ V+LD Q L+Q+K E +++L+T S I ++ E++Q L+
Sbjct: 714 DEQAAKLQE-----VNLDNTFQQLSQEKQETQDQLDTTYSTIVGKHKQIQDQQEQIQRLK 768
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
++ +QL + ++LE+ E+ TE+ E ++ P+ L Q
Sbjct: 769 SAAIEMRDEQLQLIRDKQKQQNLEELSAEITARMEALTTEIREGNEELRPLSAALEKLQQ 828
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
E L ++ K++ EE KI++ ++L+E+ ++ ++ Y G +
Sbjct: 829 EKQKLVEQKKQREEEEQKKIRNIEERLKEITALQRDVTKYVDEGR--------------D 874
Query: 1009 QRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIM 1068
+ KED ++ + E ++ S E N+ + + V + EE KL+E+
Sbjct: 875 KYKEDKESEYQAATTQLQEAERNKERISTE----MGNIQQDKDTQKVQREEEESKLAELK 930
Query: 1069 I--SDLTKYHHTLENCVIKYHSQ-------KMRSINRLIREYWTRIYQLKLSEIMISDLT 1119
S LE +++Y Q K ++R ++ +++ ++++ DL
Sbjct: 931 SERSREEGAQKPLEEQILEYSKQLEEDQYGKAEELHR------DKMIEMRTTQLLSKDLK 984
Query: 1120 KYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYR 1179
Y L+ ++K+HS KM IN+ IR+ W Y+G DI+YI I ++V SE RR+YNYR
Sbjct: 985 LYEEALDQAIVKFHSMKMDEINQNIRDLWRSTYRGQDIEYIEIRSEVEERSEGRRSYNYR 1044
Query: 1180 VVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAY 1239
VV K + +MR RCSAGQ+VLA LIIRL +++ ++ D E T +DR
Sbjct: 1045 VVMMKGDADVNMRGRCSAGQKVLASLIIRLALAEAFCLDCGILALD----EPTTNLDREN 1100
Query: 1240 VVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLT 1297
+ K+LA+ AL E I+ S Q++FQL++ITHDE+F++ L
Sbjct: 1101 I-------KSLAD---------ALVEI-----IRTRSQQRHFQLLIITHDEDFVQLLV 1137
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 124/241 (51%), Gaps = 32/241 (13%)
Query: 18 DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDE 76
DK++ V+ F P+T++VG NG GKTTIIEC+KFA + E P G
Sbjct: 4 DKDKQVISFFTPVTVLVGPNGAGKTTIIECLKFATSGELPPG------------------ 45
Query: 77 ASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTT 136
S G FVHDP+ ++ A ++L + + + + + S K + +
Sbjct: 46 ---SKGGAFVHDPKDAQRTVVRAQIELSLSDIKGEEIKIQHFMSCSLIENKYSFKREEQN 102
Query: 137 ISRKIFATGVQKNLGC--LQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVK 194
I R V +++ C L QE + + +GVSK++LN+VIFCHQE S+WPL E + +K
Sbjct: 103 IKRTKDGRRVSRSVKCGDLHQE----ITSALGVSKSVLNDVIFCHQEESNWPLSEDRVLK 158
Query: 195 EIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQK 254
E FD IF+ TKYNKA + + LR + QA L+Y ++ K Q + +N +
Sbjct: 159 EKFDSIFNVTKYNKA----RAKMHELRLKQSRTVERCQAELSYLEKNKEKAQQLRDNVAQ 214
Query: 255 R 255
+
Sbjct: 215 K 215
>gi|240281885|gb|EER45388.1| DNA repair protein RAD50 [Ajellomyces capsulatus H143]
Length = 1421
Score = 199 bits (507), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 310/1362 (22%), Positives = 576/1362 (42%), Gaps = 231/1362 (16%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG
Sbjct: 160 IDKLSILGVRSFDNSRSETIQFHTPLTLIVGYNG-------------------------- 193
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
SGK G+K E A VKL + + RSL L+
Sbjct: 194 -----------------SGKTLC-----GEK-EVLAQVKLSFKSVSGARMVATRSLQLTV 230
Query: 124 KNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENS 183
K T + + + G + ++ E M +GVSKAIL++VIFCHQ+ S
Sbjct: 231 KKTTRQQKTLEGQLL--MVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCHQDES 288
Query: 184 SWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADS 243
WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K Q K +AD
Sbjct: 289 LWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKDKADR 348
Query: 244 KKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMI 303
++ + E H + + M+ E + ++ + + + + K+ E I
Sbjct: 349 VDEI--------EALRAESHELSQQMRRAAELADKAWKESESYAQILGTLEGKRIEAKSI 400
Query: 304 QESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQ---- 359
Q S L+ + ++ D+ L+ L F+ ++ E + LK +Y+ E KQ
Sbjct: 401 QSSITNLQEHLVEVDESDEW-LERTLEQFE---SQQTQYREQEVSLKEKYV-ELKQVIED 455
Query: 360 SHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG--EGL 417
+ T + Q + GK E D K+Q+ + G E L
Sbjct: 456 NRTKLGLKQAEYGKHEND----------------------------KAQFERQLGRREKL 487
Query: 418 IK--MSQTTI---DKYLSDIKILE-----RTFSDNENT---------------KQAEINA 452
IK Q I D L D+++ E R S ++N Q+ +N
Sbjct: 488 IKKIARQNNIRGFDDDLDDMQVNEFMQRIRKLSKDQNQALERARQEAQMELREAQSLLNQ 547
Query: 453 LIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL 512
L K L+ + ++QI N + + +++ ++ + + VL++++ +++
Sbjct: 548 LSQRKSALQEVKNAARKQISSNDIEADSYQRRLDGIDIDEGSKAVLESRIEETERSLNEA 607
Query: 513 SKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLAD 572
+ + I++ + LEDE ++AE+ + LA + LK + +
Sbjct: 608 KEKAKTASWDSTIQSKTAEIRLLEDESSKLNAELIEGTKRAGDLARLDHLKKELKDRERS 667
Query: 573 INLLKERH-DRAFHLLFDMIPEENFKNSLD----KALSSITFDINRIQEDINAKEKHLYT 627
+ ++ H DR L PE N ++LD +AL T + R++ D + + L
Sbjct: 668 LETMEGAHSDRIKKFL---TPEWN-PSTLDQEYQRALQEATNALTRVERDRDGVSRELEH 723
Query: 628 LEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFE--DELDRVTLELKREQEEVSMMTS 685
E + + K L ++ L + + ++ + +P E D L + ++L +++ +
Sbjct: 724 AEFKLKTTRKDLLQRRNELKQCIQKIRDAVDDEPAEYPDILKQRQVQL-----DMAKKDA 778
Query: 686 TQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTH 741
QY Y+ K + + C +C+R F+++ +NKL +K + ++
Sbjct: 779 DQYAGLGEYLSKCMDAARQKKVCRMCSRPFKTEGEFQIFLNKLDALVKRATQDAVDE--S 836
Query: 742 IDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELE---ENVI-ETKGELKKLKTA 797
+ QL + Q + Y+ ++L T+IP+L + +LE E+++ + + K +
Sbjct: 837 MQQLEEDLEVAQSVSTFYDTWVRLSSTEIPALEKEESQLESQREDLLSQVEDHDKIVSER 896
Query: 798 LETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQK 857
+E+ K E + ++ ++ D I+ L + + L + + G R T D+ + ++
Sbjct: 897 VESKKNVESLSKTV-ATISKYDSEIKTLRSQIQNLLANQQDVGGTR-TLEDIQEQISAIG 954
Query: 858 EKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRK 915
EK E SK+ E Q+R ++ +L+ + D+ S SL R
Sbjct: 955 EKSREFQKVISKLNNEKDQSRT-----EITALELKLRDVRSSLNNANYQLEKKASLAARV 1009
Query: 916 CELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKE---HKKKLNEEGAKIQDYT 972
E +++ + +E+ + + + +++ AQ+ D + +++L +E +++ D
Sbjct: 1010 EEYRNLNAKQREAIEQADQDIESLTPEVSKAQALYDDISSRAGARERELQQEASQLSDSL 1069
Query: 973 KQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSI 1032
QL EI +Y RG LA + V+ + + ++G + IN I+ +
Sbjct: 1070 HQLNLTNE---EITSYNDRGGPALLAKCEKEVRNIETEIASLEREQGSITKDINAISARL 1126
Query: 1033 ANQSLEEIDLKNNLTLLEKKEAVAKLN---EEL-----KLSEIMISDLTKYHHTLENCVI 1084
+ + +NL + A+ +N EEL ++ + ++ N +
Sbjct: 1127 KDSENTKRQYADNLRYRRETAALEDVNATIEELAAQNAEVDRSRFREESERRTREHNALS 1186
Query: 1085 KYHSQKMRSI----NRLIR--EYWTRIY------------QLKLSEIMISDLTKYHHTLE 1126
+ KM + ++L++ W Y +++ ++ + DL +Y L+
Sbjct: 1187 ARQASKMGEMKSKDDQLMQLLADWNTDYKDAAVKFKEAHIKVETTKAAVDDLGRYGSALD 1246
Query: 1127 NCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNG 1186
++KYHS KM INR+I E W + Y+G D+D I I +D ++ R+YNYRV K
Sbjct: 1247 KAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQD 1305
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISD--------------------------------- 1213
E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1306 AEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDI 1365
Query: 1214 ------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1366 IKSRQQQSNFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNER 1407
>gi|268557426|ref|XP_002636702.1| C. briggsae CBR-RAD-50 protein [Caenorhabditis briggsae]
Length = 1354
Score = 199 bits (507), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 336/1427 (23%), Positives = 630/1427 (44%), Gaps = 272/1427 (19%)
Query: 5 DQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSG 62
++LHI GIR+ + + V + F P TLI G NG GKTT IE + F T + P
Sbjct: 64 EELHIRGIRSVGDEDHHVQKIDFLSPCTLISGPNGTGKTTTIEALNFITTGQMP--TVKK 121
Query: 63 KNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLS 122
+ F+H + +K AS F+ + VC L++
Sbjct: 122 QAFIHSRDVARKTRVDASVVLEFI---------------------DVKGRVCTAVRRLVA 160
Query: 123 NKNGKDNCATRDTTISRKIFATGVQKNLG---CLQQESVLEMCNLIGVSKAILNNVIFCH 179
K+ + T++ K + G + L C +++L + +GV KAI VIFCH
Sbjct: 161 TTGTKNAAQAEEHTLAIK-YPDGTTQTLSSKVCDFNKAIL---HHLGVPKAIFKYVIFCH 216
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
QE+S+WPL E K++K FDEIF TK+ +A E R+RK +
Sbjct: 217 QEDSTWPLSEPKELKNRFDEIFQLTKFVRAQE-------RMRKIV--------------- 254
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEE-SMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
D K+L NT + + E H E+ S + I + V+ EK + + + +T+
Sbjct: 255 -GDFAKEL---NTHEVSKQLYESHIKEKLSARKIRDDCVKKIEKGKEATSDLKRKKTQGI 310
Query: 299 ERDMIQESCNELESSIKQLFS---------GDKAELQSKLNLFKINLDEKCSELENQERL 349
+R C EL+ I++L ++ L+ ++ L ++ +E L
Sbjct: 311 KR------CEELKIEIQKLDDLSISIKQNEAERGNLKKQMELIRVE-----PYYGTEEEL 359
Query: 350 KSQYIQEEKQSHTHINEAQMKLGK-LERDEETHKKLNDTLKTKLNNLADTL------C-- 400
+ Q EE + + + K+ K + R+ + ++L+ KT L N +L C
Sbjct: 360 RKQL--EELNDGGNYADQRAKIDKRIARNNQERQELSRN-KTDLENKISSLKAEAIHCEA 416
Query: 401 -------LDTTAKSQYTPEEGEGL-IKMSQ---TTIDKYLSDIKILERTFSDNENTKQAE 449
L+++ +++ EE L I++ T + + + +I ++ ++T ++
Sbjct: 417 LKHDLQELESSLRAELDLEEDAALDIEVEHALNTKVKEMMKKCEIAVEDYTKLQSTHRSA 476
Query: 450 INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEI 509
A+ +VEL S +K+ K ++E K++ + ++I + + S ++ L K ++ +
Sbjct: 477 QEAVTKIEVEL-STMKNEKLKME---KEVDQLKSKIRQGENATSGMKELLKKEEQLRRSL 532
Query: 510 DQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQ--AQN----ITLAEIKSLK 563
D L PD K+ ++ + +R++L E V+ + + + A+N TL + S+
Sbjct: 533 DAL-----PDVDKDALDDFKHKRDKLLKETDVLKKKCAEAEKNAENEKEKATLLQTVSIA 587
Query: 564 NRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEK 623
++K I K +H+ + L +PE + L A + + D ++ED +
Sbjct: 588 HKK------ITAYKRKHENNWKGLLGYVPEFPWSERLSTAFTKLRNDKKTMEEDFRDVQL 641
Query: 624 HLYTLEANVSNSSKTLRDQKRTL-AELMDRMELVLGSKPFEDE-----LDRVTLELKREQ 677
++ LE + R Q+++L A ++ E + S P++ E L + LK+ +
Sbjct: 642 NVQKLET----MQQEYRKQEKSLTARELELSEEMSESCPYKHEDISEKLVDLRKRLKKAR 697
Query: 678 EEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIP---EQ 734
++++ +++ +++SYI + + N CPLC R F S ++ KL+ +P E+
Sbjct: 698 KDLAPISAKSDIYDSYIEESKTNGC-CPLCERDFSSKKAISEFTKKLQHMTLNLPAEQEE 756
Query: 735 TNNKKTHID----QLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGE 790
+K + ++ QL K + +EL+ + + + +++ + R E+EE K
Sbjct: 757 LESKVSRMEMEEVQLVKSEGQAKELEKIVKELKEIRQKRTTNSR----EMEEE----KES 808
Query: 791 LKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD 850
L K + LE K A LQ D+ +++Q + N + L S++S S G
Sbjct: 809 LTKNEGQLEILNKKLGFAEELQTDVGVVEQLCEQTNDNEERLANLTSEVSF--SEGPSYS 866
Query: 851 QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTV----QGGAG 906
++ + +EK+ E +R ++ S E+ LQ + N++ + ++++
Sbjct: 867 ELRTKLEEKEKE---YRRVVQESDEFQKSTEER-NKLQSKLNELGTHRVSLGEAAAQAGA 922
Query: 907 MLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELD---ALKKEHKKKLN- 962
+ LE +K E+ Q ++E+ RK L + EL ALK E +KK
Sbjct: 923 FAEQLEKKKREI-------QKCVDEMERKRDEDLPDAKLTREELIRQLALKDEARKKAEM 975
Query: 963 EEGAKIQDYTKQLEEVKRI--KLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGV 1020
E K +D ++ E+ K + ++ N +R + Q +R +KL + ++
Sbjct: 976 EMQLKRKDMQQKQEQWKMLVRNIQESNKGERMLVEQEMNVRSINEKLEENQQR------- 1028
Query: 1021 CERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL-----KLSEIMISDLTKY 1075
+R E +S + +E+ LK+ LT ++ ++ ++ L + +E + DL +
Sbjct: 1029 -QRRFEENIRSFDSVHQQELTLKDQLTRMKIEKKFREVERTLTSFVDQFNEEHLVDLKRE 1087
Query: 1076 HHTLENCVIKYHSQKMRSINRLIREYWTRI------------------YQLKLSEIMI-- 1115
+ L+N + +++++ + I+EY ++ Y+ + EI I
Sbjct: 1088 YCQLQNDLRLIGNEEVKIFTQ-IQEYQKQVDAAEAKLATKDYQRAETNYRDAIIEITILR 1146
Query: 1116 ---SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK 1172
DLTKY L+ +I++H++KM ++N +I E W ++Y DI I I +D +
Sbjct: 1147 ESIQDLTKYRKCLDVSLIQFHTEKMAAVNVIIDELWRKVYNSTDITTIRIRSDTASEGGS 1206
Query: 1173 RRTYNYRVVQ-KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIEN 1231
+R Y+Y V+ +++G E +MR RCSAGQ++LA L+IR+
Sbjct: 1207 KRAYDYNVMMVQESGTEVEMRGRCSAGQKMLASLLIRI---------------------- 1244
Query: 1232 LTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD----------------IKNA 1275
ALAE F C + ALDEPTTNLD +
Sbjct: 1245 -----------------ALAEVFGGLCSMIALDEPTTNLDEWKVDGMANVLSDLIEARRG 1287
Query: 1276 SDQ------KNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLS 1315
D ++ Q+++ITHDE + +T R Y+ + +D G+S
Sbjct: 1288 YDDDGNLRGRDMQMVIITHDERLVNKITLSCRPDYIYCLGKDEHGVS 1334
>gi|328871118|gb|EGG19489.1| DNA recombination/repair protein [Dictyostelium fasciculatum]
Length = 1306
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 202/801 (25%), Positives = 378/801 (47%), Gaps = 80/801 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M ++++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K+A T E P S
Sbjct: 1 MTSVEKILIQGIRSFDYKEPSVIDFYKPLTLIVGVNGAGKTTIIECLKYASTGEMPPNCS 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
+G+ F+HDP+I + E A +KL+ N + RS+
Sbjct: 61 NGQAFIHDPKIAGEAEVKAQ--------------------IKLRFKTPNGKPIVAARSMS 100
Query: 120 LLSNKNGKDNCATRDTTI-SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ + K D+++ S V K+ C + E+ L+G +K +L NVIFC
Sbjct: 101 LIQKPHNKQEFRQIDSSLQSFNNDGQKVSKSYRCSDLDK--EIPELMGAAKPVLKNVIFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL E K+K FDEIF A +Y KAL+SIK ++ L ++ E K +
Sbjct: 159 HQEESNWPLSESAKLKVKFDEIFSAVRYTKALKSIKDKKKELNTQLKEFKLKLEV----- 213
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQ-------LTEKERNMSVMST 291
D+ ++ + T++ Q ++ ++++S++ +NE+L Q + +N+ + +
Sbjct: 214 --VDTNREHAHRLTKEVKQMENQVVSLKDSIQRMNEQLGQKREIVEKIARAMKNVDSVIS 271
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKI-NLDEKCSEL------- 343
+ Q + ++ ++ + N++ +S+ ++F EL +F I DE+ + +
Sbjct: 272 EVQVMEARKNEMERNKNQIYNSLVEVFEEPDEEL-----VFMIKGFDEEVNRMHSAYQEL 326
Query: 344 -ENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLD 402
ENQ RL +QE++Q+ +N ++ G+ + T KK +++L +
Sbjct: 327 SENQARL----VQEKEQAAREMNRLAVESGQAKASLTTKKKNEQERDAHISDLVKRYHI- 381
Query: 403 TTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELES 462
+ P + L+ + T + S I+ ++ ++ ++ Q ++N ++ L
Sbjct: 382 INGEDDTNP-SIDQLLGLLATKFQEINSMIEEDRKSNQESLSSIQEDLNNQTGKRQTLRE 440
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+I F QI+ N + L N + V L+ + N + EI+QL ++ +
Sbjct: 441 RIHQFSTQIDDNNQKLNNYDKERTSVINLNKNLEAFAQQSNVLQDEIEQLEQTTANSNNQ 500
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADIN-------- 574
+ I A ++ +E ++ + + EI + + ++ I LK SK I+
Sbjct: 501 SLITAKTEEKKSIEQQMEISNDEIRKMSSHATIISRINQLKKDILSKQQLIDSKLQENQV 560
Query: 575 ----LLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+L + + LF + + K LD++LS + + I + +N E L
Sbjct: 561 QLKQILGSNNQPKVNGLFQQLIKS--KKELDESLSIKQEEFDDINDQLNRSENELRLYRD 618
Query: 631 NVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLF 690
+S ++ L K L+ ++D+ EL K + + L+L + ++ +++ S L+
Sbjct: 619 ELSKKNQQLSTIKPKLS-ILDQDEL----KDLSKSISILNLKLHKLEKNYAILESEDILY 673
Query: 691 NSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQR 750
YI K +E C LC + E + +P V KL+ +IP + + K ++Q K+
Sbjct: 674 KEYIEKA-HDEKECALCEK--ELNEELPQFVEKLQQHTHDIPLKLEDIKKEMNQTRKRYE 730
Query: 751 SLQELKPVYENIMKLQDTDIP 771
L+ +KP Y+ ++L +T+IP
Sbjct: 731 QLEAIKPQYDIYIQLSETEIP 751
>gi|158254626|dbj|BAF83286.1| unnamed protein product [Homo sapiens]
Length = 615
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 316/639 (49%), Gaps = 40/639 (6%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEAN 631
K L+ L S + +IN+ ++ + K L + E N
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQN 607
>gi|302503516|ref|XP_003013718.1| hypothetical protein ARB_00169 [Arthroderma benhamiae CBS 112371]
gi|291177283|gb|EFE33078.1| hypothetical protein ARB_00169 [Arthroderma benhamiae CBS 112371]
Length = 1275
Score = 197 bits (502), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 296/1283 (23%), Positives = 564/1283 (43%), Gaps = 186/1283 (14%)
Query: 89 PRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFA----- 143
P++ + E A VKL + + V RSL L+ K + T+ ++
Sbjct: 2 PQLCGEKEVFAQVKLAFKATSAAKMVVTRSLQLTVKK----LTRQQKTLEGQLLMIKEGE 57
Query: 144 -TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFD 202
T + + L Q M +GVSKA+L++VIFCHQ+ S WP+ E +K+ FDEIF+
Sbjct: 58 RTAISSRVAELDQI----MPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFE 113
Query: 203 ATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEEL 262
A KY KA+++IK LRK+ E A Y+ N+ ++ K + K + E L
Sbjct: 114 ALKYTKAIDNIKA----LRKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEAL 169
Query: 263 ----HNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLF 318
H + + M+ + + + ++ + + + + K+ E IQ S N L+ + ++
Sbjct: 170 RAESHELSKEMRRVADLADKAWKESESYAEILGALEGKRIEAKSIQTSINNLKQHLVEVD 229
Query: 319 SGDKAELQSKLNLFKINLDEKCSELENQER-LKSQYIQEEK---QSHTHINEAQMKLGKL 374
D+ L+S L F + + +E +NQE LK +Y+ ++ Q+ + Q + GK
Sbjct: 230 ESDEW-LRSTLEQF----ESRQAEYQNQEESLKEKYMDLKELIEQNRHKLGLKQTECGKN 284
Query: 375 ERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIK- 433
E D+ + + ++ ++ L D ++ + +G+ + + I+ ++ I+
Sbjct: 285 ENDK---AQFDRQVERRVR-----LIKDIARQNNFRGFDGD----LDEMEINDFMDRIQK 332
Query: 434 -------ILERTFSDNEN---TKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVIT 483
LE+ + +N Q +N L K L+ + K+QI N K+ +
Sbjct: 333 LTKERNQALEKAKREAQNQLKDAQTLLNQLSQRKSALQEVKNAAKKQISMNDKEADTIQC 392
Query: 484 QINEVNQSQSTLQVLQTKL----NRVNSEIDQL-SKSLDPDQLKNEIEAWIRQRNELEDE 538
+I+E++ + V++ ++ N + E D+ + S + D KN+IE + LE++
Sbjct: 393 RIDEMDVDEGKRAVIEARMEETENYLEKEKDKAKNASWESDIQKNDIELRL-----LEEQ 447
Query: 539 LCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERH-DRAFHLLFDMIPEENFK 597
++AE+ + LA + LK + + + + H DR L+ N +
Sbjct: 448 SSKLNAELIQGTKKAGDLARLDHLKKELKDRQRSLETMSSAHGDRISKLVDSSWSPSNIE 507
Query: 598 NSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVL 657
L + + + + + K L ++ + N K L+ + ++ +
Sbjct: 508 QRYQDVLKEASTLVTAAERERDGTGKELELIDFKLKNVRKNLQQHSADVENAAKKINETI 567
Query: 658 GSKPFEDELDRVTLELKREQEEVSMM--TSTQYL-FNSYIG---KLEENEPRCPLCTRFF 711
G +P E +K++Q E+ M + QY Y+ ++ C C R F
Sbjct: 568 GDEPEE-----YPHTVKQKQTELDMARKDADQYAGLGEYLNMCLDAANDKKVCRTCARPF 622
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV---YENIMKLQDT 768
+++ + NKLK IK+ ++ + ++ ++ L+ ++ V YE ++L T
Sbjct: 623 KTESELQIFKNKLKALIKKATDED-----VVAEIEAREAELENVRGVGTFYETWIRLTGT 677
Query: 769 DIPSLRSKLIELEENVIETKGELKKL--KTALETPKTKEKTAL-SLQGDLTLLDQNIREL 825
DIP+L+ + LE E +G L KL + + + + K + SL ++ + + E+
Sbjct: 678 DIPALKKEQSGLE---TEREGVLAKLEERDRIVDQRVESKRDIESLSKNVATISRYNNEI 734
Query: 826 NTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLNSHN 881
TLQ +++ +K +G T D+ +A EK L SK+ E Q+R++
Sbjct: 735 LTLQTQIQDLSAKQDETGTSRTLEDIQDEIATLGEKARSLKRISSKLTHELNQSRVDVGK 794
Query: 882 EKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIET 941
+L+ L+ + ++ + ++ A ++ +E E +S + +E + +
Sbjct: 795 LELK-LRDLRRELDNVNFELEKKATLVSRVE----EYRNQNSKQREIIENADNDIEGLVP 849
Query: 942 QLNLAQS---ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLA 998
+++ AQ+ ++ A ++ +K+L +E + + D QL+ +I NY +RG QL
Sbjct: 850 EVSKAQARYEDISARGEQREKELQQEVSGLNDSLHQLDLASE---DITNYIERGGPAQLE 906
Query: 999 ALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKL 1058
+ +Q + + + A++ R +N I+ + + + +NL ++ +A+ +
Sbjct: 907 RSKRELQNILDEIKTLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLRYRQESKALINV 966
Query: 1059 NEELKLSEIMISDLTKYHHTLENCVIKYHSQK-MRSINRLIREYWTRIYQLK-------- 1109
N E I+DL + ++ K S++ R N L + +++ ++K
Sbjct: 967 NRE-------IADLESQNAEVDRSRFKEESERNTREHNALAAKQASKMGEMKSKDDQLMQ 1019
Query: 1110 ------------------------LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1145
++ + DL +Y L+ ++KYH KM INR+I
Sbjct: 1020 LLADWNTDYKDAGAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMKYHGLKMEEINRIIG 1079
Query: 1146 EYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACL 1205
E W + Y+G D+D I I +D + R+YNYRV K E DMR RCSAGQ+VLA +
Sbjct: 1080 ELWQKTYRGTDVDTILIRSD-NESARGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASI 1138
Query: 1206 IIRLFISD---------------------------------------QKNFQLIVITHDE 1226
IIRL +++ Q NFQLIVITHDE
Sbjct: 1139 IIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLIVITHDE 1198
Query: 1227 EFIENLTAIDRA-YVVRIVRDHK 1248
EF+ ++ D Y R+ R+ +
Sbjct: 1199 EFLRSMQCGDFCDYYYRVSRNER 1221
>gi|90083983|dbj|BAE90942.1| unnamed protein product [Macaca fascicularis]
Length = 584
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 305/588 (51%), Gaps = 88/588 (14%)
Query: 755 LKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGD 814
L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T +E++A D
Sbjct: 4 LVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTD 63
Query: 815 LTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKI 870
+T++++ EL ++R++ +Q +K+ G +DLD QV +++EK+++L+T SKI
Sbjct: 64 VTIMERFQMELKDVERKIAQQAAKLQG-----IDLDRTVQQVNQEKQEKQHKLDTVSSKI 118
Query: 871 ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTEL 929
E + + E++Q L+ N++ S++L + + LE++ EL + S+Y+ E+
Sbjct: 119 ELNRKLIQDQQEQIQHLKSVTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EI 177
Query: 930 EELGRKVAPIETQLNLAQSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
++ +V+P+ET L Q E + + KK K+ ++ K+ D ++++ + +I N
Sbjct: 178 KDAKEQVSPLETTLEKFQQEKEEIINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIEN 235
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEI 1040
Y + G +E+ +LN+ +IA+ CE+ +IN Q I Q ++E
Sbjct: 236 YIQDGK-DDYKKQKET--ELNK----VIAQLSECEKHKEKINEDMRIMRQDIDTQKIQER 288
Query: 1041 DLKNNLTL--------------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLE 1080
L++NLTL + + + + NE KL E + D K +H+L
Sbjct: 289 WLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DNIKRNHSLA 346
Query: 1081 NCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIK 1131
K + +++ + +RE R + K E+MI DL Y+ TL+ ++K
Sbjct: 347 LGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMK 406
Query: 1132 YHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIE 1188
+HS KM IN++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K
Sbjct: 407 FHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTA 466
Query: 1189 QDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHK 1248
DMR RCSAGQ+VLA LIIRL +++ +I DE T +DR + +
Sbjct: 467 LDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEP----TTNLDRENIESLAH--- 519
Query: 1249 ALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENL 1296
AL E IK+ S Q+NFQL+VITHDE+F+E L
Sbjct: 520 ALVEI------------------IKSRSQQRNFQLLVITHDEDFVELL 549
>gi|425768648|gb|EKV07166.1| DNA repair protein Rad50 [Penicillium digitatum PHI26]
gi|425775942|gb|EKV14182.1| DNA repair protein Rad50 [Penicillium digitatum Pd1]
Length = 1210
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 270/1194 (22%), Positives = 525/1194 (43%), Gaps = 150/1194 (12%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M +GVSKA+L++VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R +
Sbjct: 47 MPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKRFDEIFEALKYTKAIDNIKALRKKQ 106
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+E+ + K Q K +AD ++ + + EE + + M+ + E +
Sbjct: 107 NEELGKYKIMEQHAKEDKDKADRAEKRSVKLQDEIEALREETQRMSQEMRRVAELADKAW 166
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
+ + + + + K+ E IQ + + L+ + +L D+ L+S L F+ +
Sbjct: 167 TQSESFAQVLGALEGKRIEAKSIQTTIDNLKRHLIELDDSDEW-LESTLEQFETKQVQYQ 225
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
+ E+Q+ + + +Q+ + Q + GK E D+ ++ + + +N +
Sbjct: 226 QQEESQKESYMEIKDQIEQTRHRLGLKQAENGKFENDKANFERQSQRRQNMINEI----- 280
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKIL--ERTFSDNENTKQAE--------- 449
A++ GE K+ Q+ ID ++ IK L E+ S + ++A+
Sbjct: 281 ----ARANNIRGLGE---KIDQSEIDTFMQKIKRLLREQNQSLDRVKREAQRELREVQET 333
Query: 450 INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEI 509
+N + K L+ + K+QI N+ + T ++NE+ + L++K+ + S +
Sbjct: 334 LNEIGQRKSALQETKNAAKRQIAANENEATTYQKKLNEIEVDEGFQAALESKVEDITSNL 393
Query: 510 DQL---SKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK 566
+ +K+ DQ + A IR+ LEDE +++E+ + LA + LK
Sbjct: 394 EHAKDRAKTASWDQDIQDANAEIRR---LEDENSRLNSELIDSTKKAGELARLDHLKKES 450
Query: 567 ESKLADINLLKERH-DRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
+ + + +K + DR + E + +AL + + ++ + + + L
Sbjct: 451 KDRERSLQTMKGAYSDRLEKAIGSDWKPETLERGFQQALDIESKQVADVERERDGVSREL 510
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTS 685
+E + + K L+ Q++ L E + + + ++P E + E ++ Q +++ +
Sbjct: 511 EHVEFKLKTAKKNLKQQQKELDECVKEIHNAVDAEP--SEYPEIVKE-RQAQYDLARKDA 567
Query: 686 TQYL-FNSYIGKLEENEPR---CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTH 741
QY Y+ K + R C C R F+++ + KL + KK
Sbjct: 568 DQYAGMGEYLTKCLDAAKRTKLCRTCQRSFKNEAELQTFTKKLDALV---------KKAG 618
Query: 742 IDQLCKQQRSLQE-------LKPVYENIMKLQDTDIP----------SLRSKLIELEENV 784
+D + +SL+E Y+ ++L +T IP S R +L+E E
Sbjct: 619 LDAEDETLKSLEEDLETARAASASYDTWVRLSETVIPELEQEEQECESQRDQLLEKLETQ 678
Query: 785 IETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS 844
E+ + K +E T ++ + I+EL+T Q++ S
Sbjct: 679 DGKVSEMTESKRDVEGLAKTVSTIARYDVEIKTIRSQIQELSTKQQD--------SSTAR 730
Query: 845 TGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQ-SLQKQKNDIHSKQLTVQG 903
T D+ + +A EK EL +K+ + + S KL+ + K+++ + + ++
Sbjct: 731 TLEDIQEEIASNNEKSRELKKTLAKVTNEKEMTRSEINKLELEFRDMKSNLDNVKFQLEK 790
Query: 904 GAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKK--- 960
A + +E E + +++ + +E+ R + + +L AQ+ D + + K+
Sbjct: 791 KADLTVRME----EFKKLNTQQRDAIEKADRDIEGLTPELLQAQARYDDISQRADKRERD 846
Query: 961 LNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGV 1020
L E ++ D QL+ +I +Y +RG QL ++ +Q++ + A +
Sbjct: 847 LQHEIGRLSDNIHQLDLAND---DINSYNQRGGPGQLERSKKELQEIEAEISKLEADQSE 903
Query: 1021 CERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE 1080
R IN+I+ + + + +NLT + ++ + EE++ E +++ + E
Sbjct: 904 ITREINKISTQLKDSENTKRQYSDNLTYRQATRSLNTVVEEVEQLEAQNAEVDRGRFKQE 963
Query: 1081 --------NCVIKYHSQKMRSI----NRLIR--EYWTRIY------------QLKLSEIM 1114
N + + KM + ++L++ W Y +++ ++
Sbjct: 964 SERWTREHNSLAAKQASKMGEMKSKDDQLMQLLADWNTDYKDASSKYKECHIKVETTKAA 1023
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRR 1174
+ DL +Y L+ +++YH KM IN + E W + Y+G D+D I I +D ++ R
Sbjct: 1024 VEDLARYGGALDKAIMQYHGLKMAEINAIAGELWQKTYRGTDVDTILIRSD-NENAKGNR 1082
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------------- 1213
+YNYRV K+G E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1083 SYNYRVCMVKSGAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRD 1142
Query: 1214 ------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R+ +
Sbjct: 1143 NIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHMKCGDFSDYYYRVSRNER 1196
>gi|302653707|ref|XP_003018676.1| hypothetical protein TRV_07308 [Trichophyton verrucosum HKI 0517]
gi|291182336|gb|EFE38031.1| hypothetical protein TRV_07308 [Trichophyton verrucosum HKI 0517]
Length = 1233
Score = 192 bits (489), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 278/1211 (22%), Positives = 541/1211 (44%), Gaps = 184/1211 (15%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M +GVSKA+L++VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK L
Sbjct: 70 MPQYLGVSKAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKA----L 125
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEEL----HNIEESMKPINEKL 276
RK+ E A Y+ N+ ++ K + K + E L H + + M+ + +
Sbjct: 126 RKKQNEELAKYKIMENHARDDKDKADRAEKRSLKLQEEIEALRAESHELSKEMRRVADLA 185
Query: 277 VQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINL 336
+ ++ + + + + K+ E IQ S N L+ + ++ D+ L+S L F
Sbjct: 186 DKAWKESESYAEILGALEGKRIEAKSIQTSINNLKQHLVEVDESDEW-LRSTLEQF---- 240
Query: 337 DEKCSELENQER-LKSQYIQEEK---QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
+ + +E +NQE LK +Y+ ++ Q+ + Q + GK E D+ + + ++ ++
Sbjct: 241 ESRQAEYQNQEESLKEKYMDLKELIEQNRHKLGLKQTECGKNENDK---AQFDRQVERRV 297
Query: 393 NNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIK--------ILERTFSDNEN 444
L D ++ + +G+ + + I+ ++ I+ LE+ + +N
Sbjct: 298 R-----LIKDIARQNNFRGFDGD----LDEMEINDFMDRIQKLTKERNQALEKAKREAQN 348
Query: 445 ---TKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTK 501
Q +N L K L+ + K+QI N K+ + +I+E++ + V++ +
Sbjct: 349 QLKDAQTLLNQLSQRKSALQEVKNAAKKQISMNDKEADTIQRRIDEMDVDEGKRAVIEAR 408
Query: 502 LNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNI------- 554
+ ++ K+L+ ++ K + +W + + EL +++ + S L A+ I
Sbjct: 409 M-------EETEKNLEKEKDKAKNASWESDIQKNDTELRLLEEKSSKLNAELIQGTKKAG 461
Query: 555 TLAEIKSLKNRKESKLADINLLKERHDRAFHLLFD--MIP---EENFKNSLDKALSSITF 609
LA + LK + + + + H L D P E+ +++ L +A + +T
Sbjct: 462 DLARLDHLKKELKDRERSLETMSSAHGDRISKLVDSSWSPSSIEQRYQDVLKEASTLVTT 521
Query: 610 DINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRV 669
+ + + K L ++ + N K L+ + ++ +G +P E
Sbjct: 522 ----AERERDGTGKELELIDFKLKNVRKNLQQHSADVENAAKKINETIGDEPEE-----Y 572
Query: 670 TLELKREQEEVSMM--TSTQYL-FNSYIGK---LEENEPRCPLCTRFFESDYSVPGLVNK 723
+K++Q E+ M + QY Y+ K ++ C C R F+++ + NK
Sbjct: 573 PHTVKQKQTELDMARKDADQYAGLGEYLNKCLDAANDKKVCRTCARPFKTESELQIFKNK 632
Query: 724 LKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPV---YENIMKLQDTDIPSLRSKLIEL 780
LK IK+ ++ + ++ ++ L+ ++ V YE ++L TDIP+L+ + L
Sbjct: 633 LKALIKKATDED-----VVAEIEAREADLENVRGVGTFYETWIRLTGTDIPALKKEQSGL 687
Query: 781 EENVIETKGELKKLKT---ALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQES 837
E E +G L KL+ ++ ++ SL ++T + + E+ TLQ +++ +
Sbjct: 688 E---TEREGVLAKLEEHDRIVDQRVESKRDIESLSKNVTTISRYNNEILTLQTQIQDLSA 744
Query: 838 KI--SGMRSTGVDLDQVLAQQKEKKNELNTFRSKI--ESGQTRLNSHNEKLQSLQKQKND 893
K +G T D+ +A E L SK+ E Q+R++ +L+ L+ + +
Sbjct: 745 KQDETGTSRTLEDIQDEIATLGENARSLKRISSKLTHELNQSRVDVGKLELK-LRDLRRE 803
Query: 894 IHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS---EL 950
+ + ++ A ++ +E E +S + +E + + +++ AQ+ ++
Sbjct: 804 LDNVNFELEKKATLVSRVE----EYRNQNSKQRETIENADNDIEGLVPEVSKAQARYEDI 859
Query: 951 DALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQR 1010
A ++ +K+L +E + + D QL+ +I NY +RG QL + +Q +
Sbjct: 860 SARGEQREKELQQEVSGLNDSLHQLDLASE---DITNYIERGGPAQLERSKRELQNILDE 916
Query: 1011 KEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMIS 1070
+ + A++ R +N I+ + + + +NL ++ +A+ +N E I+
Sbjct: 917 IKSLEAEQTDLTRELNNISTRLKDSESTKRQYSDNLRYRQESKALINVNRE-------IA 969
Query: 1071 DLTKYHHTLENCVIKYHSQK-MRSINRLIREYWTRIYQLK-------------------- 1109
DL + ++ K S++ R N L + +++ ++K
Sbjct: 970 DLESQNAEVDRSRFKEESERNTREHNALAAKQASKMGEMKSKDDQLMQLLADWNTDYKDA 1029
Query: 1110 ------------LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
++ + DL +Y L+ +++YH KM INR+I E W + Y+G D+
Sbjct: 1030 GAKFKEAHIKVETTKAAVEDLGRYGGALDKAIMRYHGLKMEEINRIIGELWQKTYRGTDV 1089
Query: 1158 DYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---- 1213
D I I +D + R+YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1090 DTILIRSD-NESARGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGV 1148
Query: 1214 -----------------------------------QKNFQLIVITHDEEFIENLTAIDRA 1238
Q NFQLIVITHDEEF+ ++ D
Sbjct: 1149 NCGLIALDEPTTNLDRDNIRSLAESLHEIIRARQQQANFQLIVITHDEEFLRSMQCGDFC 1208
Query: 1239 -YVVRIVRDHK 1248
Y R+ R+ +
Sbjct: 1209 DYYYRVSRNER 1219
>gi|390346722|ref|XP_792128.3| PREDICTED: DNA repair protein RAD50-like [Strongylocentrotus
purpuratus]
Length = 1587
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 287/623 (46%), Gaps = 111/623 (17%)
Query: 724 LKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEEN 783
L+ +++ P + K+ I Q +Q L L+P+ + + KL + +IP L+ +L + +
Sbjct: 998 LQDELRLAPSKLVEKERSITQQKEQSDRLWVLRPIKDAVKKLSEREIPDLKLELFAVNAD 1057
Query: 784 VIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+ + + K + + + E A ++ D+ +L++ + +L L ++ Q SG
Sbjct: 1058 IEKLNATISKAEDNVSMLQVDEAMARDMKPDIQILEKTLTDLRDLDHKIGEQAKYFSGSV 1117
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQG 903
+ +D Q Q++E + +N R I N I S+ L +
Sbjct: 1118 RSTLDFKQ--RQRQEHVDNVNKMRISI---------------------NSITSETLHLSA 1154
Query: 904 GAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNE 963
+ LE + EL +Q E+E ++ PI+ +L + A+ ++ ++++
Sbjct: 1155 KLQKRERLESEQAELSTNSRTFQREIENSRQEQKPIKDKLQKLDRDKAAIIQKKEREIKA 1214
Query: 964 EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCER 1023
KI + +QL +++ I Y G ++L + + + LN++ + E
Sbjct: 1215 IREKIDEVQQQLRDIRAGTSHIAKYVTDGKESKLDDVEKKIIVLNEKLTKLGEDLSPIEA 1274
Query: 1024 TINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHH-TLENC 1082
TI ++ I+NQ ++E++L+NN+ L + ++ V K + E+ E + L Y+ T+E
Sbjct: 1275 TIKQLTDEISNQKVKEMELRNNMLLFKYRQDVEKKSGEI---EKLQEQLGGYNPITIERE 1331
Query: 1083 VIKYHSQKM---RSINRL------IREYWTR--------------------IYQLKLSEI 1113
+ +K + N+L +RE T+ + + + +E+
Sbjct: 1332 KTEMEGKKAGLNKEKNQLDGRSTELREAVTKQEKELESDKYKNAEKNYNDMMIKCRTTEV 1391
Query: 1114 MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD--VGTGSE 1171
DL KY++ L + + YH QKM IN+++++ W Y+G+DIDYI I AD G +
Sbjct: 1392 ANEDLDKYYNALNSAINTYHIQKMLKINKILQDLWRNTYKGSDIDYIEIRADDETGASTT 1451
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIEN 1231
+RR YNYRVV K DMR RCSAGQ+VLA L+IRL
Sbjct: 1452 QRRQYNYRVVMMKGDEILDMRGRCSAGQKVLASLLIRL---------------------- 1489
Query: 1232 LTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------------IKNASD 1277
ALAETF +CGI ALD+PT NLD +K+ +
Sbjct: 1490 -----------------ALAETFCLSCGILALDDPTANLDRDNIESLAHALVDILKSQEN 1532
Query: 1278 QKNFQLIVITHDEEFIENLTAID 1300
Q+NFQL++ITHDEEF+E L D
Sbjct: 1533 QRNFQLLIITHDEEFVELLGHSD 1555
Score = 160 bits (404), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 133/235 (56%), Gaps = 30/235 (12%)
Query: 1 MALLDQLHIMGIRNFPADKN--RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA +++L I GIR F D +V++F PLT+I+G+NG GKTTIIEC+K+ + E+P G
Sbjct: 1 MASVEELSIQGIRGFGQDDGDRQVIQFFHPLTIIMGQNGAGKTTIIECLKYICSGEFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
A G F+HDP++ + E A VKL + V V RS
Sbjct: 61 AK---------------------GAPFIHDPKVAHETEVKAQVKLCFKDKAGKDVVVTRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K + + + TI R + G + L C + + M +GVSK +L+NVIFC
Sbjct: 100 MVATKKEKRIEFKSLEGTIER-VDNFGKKPGLKCAEIDRA--MVESLGVSKQVLSNVIFC 156
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQA 233
HQE+++WPL EGK +K FDEIF AT++ KALE+I+ +LR+E + YQ+
Sbjct: 157 HQEDANWPLSEGKTLKGKFDEIFAATRHIKALETIR----KLRREQSDQIKGYQS 207
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 125/588 (21%), Positives = 266/588 (45%), Gaps = 51/588 (8%)
Query: 270 KPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKL 329
K ++++ +L ER+++ ++ +Y+ E+D + + +E ++ +F G EL+
Sbjct: 414 KELDDQKARLEADERSVTKINAKYEG---EKDQLIKGMKSVEDQLENIFPGSVDELRKIY 470
Query: 330 NLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKL-GKLERDEETHKKLNDTL 388
+ + + EK +L+ E K + +QE Q T + + G L++ ++
Sbjct: 471 STHQSKITEKEHQLQENEG-KRRILQESAQRTTSEKSKLLVIQGVLQQAAREQQETIRQR 529
Query: 389 KTKLNNLADTLCLDTTAKS-QYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQ 447
++ LA+ L L +K+ ++T ++ S+ + + + +++ D E
Sbjct: 530 DRRMRGLANQLHLLGYSKTGEFTSSRVGDFMEKSKEWTEAQRGEAERIKKQHEDREKGVD 589
Query: 448 AEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTK------ 501
+ L LE+ IK I N L + +++ + +S L+ L+ +
Sbjct: 590 KQSQDLRATYTGLETTIKMKTATINDNSSKLQEIKGELSTMGESSQRLKELEKEKKGAQA 649
Query: 502 ------LNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNIT 555
R+ SE++QL SL+ D +K EI++ R+ + + + + E++ + +Q+
Sbjct: 650 RSDLVLFQRLESELNQLEGSLNVDDVKQEIDSLQREAKQYDKRMSDLTNELTTISSQSQA 709
Query: 556 LAEIKSLKNRKESKLADI-NLLKERHDRAFHLL-FDMIPEENFKNSLDKALSSITFDINR 613
A+++ ++ K +K + NL +R + HLL D P EN L K
Sbjct: 710 RAKLEMMQKEKNTKENETRNLRGKREEEMLHLLQVDHFPTENIGTKLSKY---------- 759
Query: 614 IQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLEL 673
I++ + KE L SN+ D++ GS+ ++ + ++T +
Sbjct: 760 IEDQLKKKEDELR------SNT---------------DQLMSACGSEDIDESIKKITQSI 798
Query: 674 KREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPE 733
Q E +T +++LF+ YI L+ + CPLC R F+S V LV +L+ +++ P
Sbjct: 799 NSLQNEHGALTGSKHLFDRYIQSLQRTDALCPLCHRGFDSGVEVQELVQELQDELRLAPS 858
Query: 734 QTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKK 793
+ K+ I Q +Q L L+P+ + + KL + +IP L+ +L + ++ + + K
Sbjct: 859 KLVEKERSITQQKEQSDRLWVLRPIKDAVKKLSEREIPDLKLELSAVNADIEKLNATISK 918
Query: 794 LKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISG 841
+ + + E A ++ D+ +L++ + +L L ++ Q SG
Sbjct: 919 AEDNVSMLQVDEAMARDMKPDIQILEKTLTDLRDLDHKIGEQAKYFSG 966
>gi|209946186|gb|ACI97324.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 180/672 (26%), Positives = 312/672 (46%), Gaps = 68/672 (10%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIK 315
D + EE MKP ++ Q + ++ + L IK
Sbjct: 218 DAIKAQCSECEEEMKPXXXXXXEIXXXXXXXXXXXXQXXXXXXKXXXCKDQISTLTLKIK 277
Query: 316 QLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQEEKQS 360
+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 278 KPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKHCLAK 337
Query: 361 HTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKM 420
H +E + L+R +E ++L+ + L + + GE L +
Sbjct: 338 QRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEVLRDI 383
Query: 421 SQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTN 480
I K+ +I+E+ + Q +I+ L +E + E + + ++Q E +K++
Sbjct: 384 EAMIITKHCEITEIVEQN-EKADRXXQVKIDELRIELTKSEQSVTAQEKQRESSKRESET 442
Query: 481 VITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELC 540
+ +I ++ S L+ L+ ++N VN + +K++D +K+ I E + +
Sbjct: 443 LGVEIKKIETSMQDLKKLEKEINEVNELYESATKNIDQQAIKDAIARKKASIAENQIQFK 502
Query: 541 VIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEENFKNS 599
+D +++ L + +AE SLK ++ + K +++ ++ RH F LF N++ S
Sbjct: 503 KLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRS 561
Query: 600 LDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELV--- 656
+ + +I + E N ++ + E N + D R EL D EL+
Sbjct: 562 MQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEELIYQK 618
Query: 657 LGSKPFEDELDR 668
S P++D L+R
Sbjct: 619 CRSSPYDDLLER 630
>gi|209946208|gb|ACI97335.1| RAD50 [Drosophila melanogaster]
Length = 630
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 172/626 (27%), Positives = 294/626 (46%), Gaps = 70/626 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE L +Q +
Sbjct: 274 LXIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQETLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + E + + ++Q E +K
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRXXXVXXXXXXXXXXXXEQXVTAQEKQRESSKX 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ +I ++ S L+ L+ ++N+VN + +K++D +K+ I E +
Sbjct: 439 XXETLGVEIKKIETSMQDLKKLEKEINQVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAK 621
++ S+ + +I + E N +
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQ 583
>gi|209946166|gb|ACI97314.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 186/676 (27%), Positives = 319/676 (47%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D E+ EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKEQCMECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFK---INLDEKCSELEN------------QERLKSQYIQE 356
IK+ F G EL +++ F + + +K +E+E QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVEGDLSQIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + + + L + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRSXXVKXXELXXXXXXSXXXVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ +I ++ S L+ L+ ++N+VN + +K++D +K+ I E +
Sbjct: 439 XSETLGVEIKKIETSMQDLKKLEKEINQVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITSN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSIQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 VLG---SKPFEDELDR 668
+ P++D L+R
Sbjct: 615 IYQKCRXTPYDDLLER 630
>gi|405962729|gb|EKC28378.1| DNA repair protein RAD50 [Crassostrea gigas]
Length = 403
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 203/387 (52%), Gaps = 30/387 (7%)
Query: 1 MALLDQLHIMGIRNF-PADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I GIR+F P D ++ ++ F PLTLI+G NG GKTTIIEC+K+ T P G
Sbjct: 1 MSRIEKMSIQGIRSFGPDDSDKGIISFFMPLTLILGPNGTGKTTIIECLKYMTTGVMPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G F+HDP++ + + A ++LQ N+ + + R
Sbjct: 61 ---------------------SKGGAFIHDPKVAHERQVKAQIRLQFRDVTNNRMVIQRI 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K K T D I+R G +K++G E EM +GVSK +L NVIFC
Sbjct: 100 MEATQKLKKIEMKTLDGVITR-YDVNGEKKSIGSKCAEIDREMITSLGVSKPVLENVIFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +KE FD IF +T+Y KALE+I R + + E+K + Q + K
Sbjct: 159 HQEDSNWPLSEGKALKEKFDAIFASTRYVKALETI---RKVKQMQDQELKLYKQEVTHLK 215
Query: 239 KEADSKKQLIYNNTQKRDQSF---EELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D +QL + ++ + E + IE ++P+ EKL Q+ + + + T +
Sbjct: 216 QLKDKSEQLEADKNERETKMMVCRESVEKIESKLRPVIEKLDQIGNQSDKIYKIQTSIEK 275
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
++E +M++ S EL IK F G ELQ K+ F + E+ +E + L + +
Sbjct: 276 HRSEMNMMENSATELRGQIKNEFQGSVEELQKKIAEFGNMVQERQETMEQFQMLHKELNK 335
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHK 382
E ++ M++GKLE++ E +K
Sbjct: 336 ELEKLGQEKGNLLMEVGKLEQESERYK 362
>gi|209946168|gb|ACI97315.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 181/676 (26%), Positives = 308/676 (45%), Gaps = 76/676 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+G CGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGXXXCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAXKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLFKINLDE---------------KCSELENQERLKSQYIQE 356
IK+ F G EL +++ F + E K S + QE+L +Q +
Sbjct: 274 LKIKKPFRGTLDELDQEISNFDXRMLEMRQKRTEVEGDXXXIKRSSVAEQEKLGTQDRKH 333
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEG 416
H +E + L+R +E ++L+ + L + + GE
Sbjct: 334 CLAKQRHQSELACRAQLLKRVKEFCRELHIPIDCDLVEQPEKM--------------GEV 379
Query: 417 LIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKK 476
L + I K+ +I+E+ + + + ++Q E +K+
Sbjct: 380 LRDIEAMIITKHCEITEIVEQN-EKADRXXXXXXXXXXXXXXXSXXXVTAQEKQRESSKR 438
Query: 477 DLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELE 536
+ +I ++ S L+ L+ ++N+VN + +K++D +K+ I E +
Sbjct: 439 XSETLGVEIKKIETSMQDLKKLEKEINQVNELYESATKNIDQQAIKDAIARKKASIAENQ 498
Query: 537 DELCVIDAEISILQAQNITLAEIKSLKNRK-ESKLADINLLKERHDRAFHLLFDMIPEEN 595
+ +D +++ L + +AE SLK ++ + K +++ ++ RH F LF N
Sbjct: 499 IQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKNQEVHRVRSRHSDHFGKLFKEPITCN 557
Query: 596 FKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMEL 655
++ S+ + +I + E N ++ + E N + D R EL D EL
Sbjct: 558 YRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEIKRKN---LISDISRMEKELKDSEEL 614
Query: 656 V---LGSKPFEDELDR 668
+ P++D L+R
Sbjct: 615 IYQKCXXXPYDDLLER 630
>gi|38511824|gb|AAH62603.1| RAD50 protein [Homo sapiens]
Length = 557
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 150/577 (25%), Positives = 291/577 (50%), Gaps = 37/577 (6%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESK 569
+L+ L +D E+ L T +++ L K K
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADK 548
>gi|358058196|dbj|GAA95988.1| hypothetical protein E5Q_02646 [Mixia osmundae IAM 14324]
Length = 1310
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 208/842 (24%), Positives = 364/842 (43%), Gaps = 135/842 (16%)
Query: 534 ELEDELCVIDAEISILQAQNITLAEI---KSLKNRKESKLADINLLKERHDRAFHLLFDM 590
ELED+ E + LQ+Q AE+ + R+++ L L+ + + +A LL
Sbjct: 518 ELEDKRETAQKEFASLQSQAGVRAELAIKRQDAGRRQTALD--KLIADNNVKATALLGGG 575
Query: 591 IPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVS----NSSKTLRDQKRTL 646
I F + AL+ + + +Q E+ +S + L DQ+
Sbjct: 576 IVSATFDEQVSTALADKSEQLAVVQRTAAVSERQQKDCSETISRLRRQVDRLLEDQRSKQ 635
Query: 647 AELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI--GKLEENEPRC 704
E+ D + G + ++R EL+ Q+E+ + +++ + GK + RC
Sbjct: 636 KEIKDGLADTDGYASIAEAIERDRAELQSSQDELGRQQVSSGFYDNLLEYGK----KGRC 691
Query: 705 PLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMK 764
C R + + N L+ KI++IP+Q + D + L P+ ++ +
Sbjct: 692 FCCRRPMSPEAILVHDKN-LRDKIRDIPDQIKQLEGERDSWQTFLADWERLLPIENDLKR 750
Query: 765 LQDTDIPSLRSKLIELEENVI-------ETKGELKKLKTALETPKTKEKTALSLQGDLTL 817
L++ D+P +++L E+ + +G + LK + + ++ A+ D+
Sbjct: 751 LEEIDLPKAQTELKGAEDKLTAADYDLESARGRMSDLKLGVSDLQVLKRAAI----DMAR 806
Query: 818 LDQNIRELNTLQRELERQESKISGMRSTG---VDLDQVLAQQKEKKNELNTFRSKIESGQ 874
L + ++ LN +LE + +++ +LD + Q KEKK E+ +K +
Sbjct: 807 LGRELQGLNADVADLETSLAHTGSIKTVADVQTELDALSGQMKEKKREMQLLANKKDQQN 866
Query: 875 TRLNSHNEKLQSLQ----KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTE-- 928
+ E + + Q +QKND+ R+ EL+ + Q +
Sbjct: 867 RLITGMRETVSTCQMKLNQQKNDLA------------------RRAELQNTLAAAQKDVG 908
Query: 929 -----LEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKL 983
+EE +++ ++ L+ A+ EL+ +H ++ K+ K L + +
Sbjct: 909 ASKIAMEEGRQRLQAMQGPLDAARDELEQALADHSSEVAVHTTKLGGLDKSLSSLDALAQ 968
Query: 984 EILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIA---NQSLE-- 1038
+ Y GT +L A +++ DI A+R ++TI + IA QS E
Sbjct: 969 RVQRYETDGTEAKLRACEAAIK-------DIEAQRKGGQKTIKALTDEIAALDKQSSEAQ 1021
Query: 1039 --EIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCV------------- 1083
+ +L++N K+ +AK N+EL S++ + + E
Sbjct: 1022 SYQRNLEDNQRYRNYKKELAKSNDEL--SDLDVESANRAKKQFEASYTASRAEQESKSGQ 1079
Query: 1084 ---------IKYHSQKMRSINRLIREY-------WTRIYQLKLSEIMISDLTKYHHTLEN 1127
+ QK R L EY ++ +K ++ I D+ KY L++
Sbjct: 1080 QAKLAGELEMSRQQQKERR-GELDEEYKDIRKRHLDQVINVKTLDMAIHDMEKYGKALDS 1138
Query: 1128 CVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGI 1187
++ YHS KM+ IN +IRE WT+ Y G+DID I+I +D G G+ K RTYNYRVV K+G+
Sbjct: 1139 AIMAYHSAKMQEINNIIRELWTKTYTGSDIDKIAIVSD-GDGATKARTYNYRVVMDKDGV 1197
Query: 1188 EQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDH 1247
+ DMR RCSAGQ+VLA +IIRL +++ + ++ DE T +DRA +
Sbjct: 1198 QMDMRGRCSAGQKVLASIIIRLALAESFSASCGIMALDEP----TTNLDRANIA------ 1247
Query: 1248 KALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTA---IDRAYV 1304
+LA S DI FQLI+ITHDEE + +L IDR Y
Sbjct: 1248 -SLAIALS---------------DIVKERKNAKFQLIIITHDEELLNHLGGSSHIDRYYY 1291
Query: 1305 VR 1306
V+
Sbjct: 1292 VK 1293
>gi|209946194|gb|ACI97328.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMDELKIKEANIKVEAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLF 332
IK+ F G EL +++ F
Sbjct: 274 LKIKKPFRGTLDELDQEISNF 294
Score = 42.7 bits (99), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 107/226 (47%), Gaps = 8/226 (3%)
Query: 447 QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN 506
Q +I+ L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN
Sbjct: 409 QVKIDELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINEVN 468
Query: 507 SEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK 566
+ +K++D +K+ I E + + +D +++ L + +AE SLK ++
Sbjct: 469 ELYESATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKE 527
Query: 567 -ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
+ K +++ ++ RH F LF N++ S+ + +I + E N ++
Sbjct: 528 LDKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKE 587
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDR 668
+ E N + D R EL D EL+ S P++D L+R
Sbjct: 588 QSYEIKRKN---LINDISRMEKELKDSEELIYQKCRSTPYDDLLER 630
>gi|209946200|gb|ACI97331.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 173/321 (53%), Gaps = 38/321 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLF 332
IK+ F G EL +++ F
Sbjct: 274 LKIKKPFRGTLDELDQEISNF 294
>gi|209946202|gb|ACI97332.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 173/321 (53%), Gaps = 38/321 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE----LE 311
D + EE MKPI +LV++ RN+ +YQ +K E D ++C + L
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNVEFEIGKYQAQKVEMDTKHKNCKDQISTLT 273
Query: 312 SSIKQLFSGDKAELQSKLNLF 332
IK+ F G EL +++ F
Sbjct: 274 LKIKKPFRGTLDELDQEISNF 294
>gi|157130497|ref|XP_001661899.1| DNA repair protein rad50 [Aedes aegypti]
gi|108871897|gb|EAT36122.1| AAEL011772-PA [Aedes aegypti]
Length = 284
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 168/301 (55%), Gaps = 33/301 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ + +L I GIR+F + V ++FQ PLTLIVG+NGCGKTTIIEC+K+ LT E P G
Sbjct: 1 MSTISKLEIRGIRSFGVESGDVQKIKFQSPLTLIVGQNGCGKTTIIECLKYGLTGEVPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
GK FVHDP+I E+ VKL T + V RS
Sbjct: 61 TDRGKAFVHDPKIFSTVESMGQ--------------------VKLMVTDFTGNRVTATRS 100
Query: 119 LLLSNK--NGKDNCATRDTTISRKIFATGVQKNLGCLQQESV-LEMCNLIGVSKAILNNV 175
+ +S K + T D+ ++ + ATG + L + + EMC+ +GVSKAI+NNV
Sbjct: 101 MKVSQKGRGQQPKFETLDSVVTMENVATGEKTTLSRPRAADINNEMCDAMGVSKAIINNV 160
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALES-IKIQR---DRLRKEIPEIKAHY 231
IFCHQE+S+WPL+E K++K+ FD IF T+YN+ +E IKI + DR +++ ++K
Sbjct: 161 IFCHQEDSNWPLEEPKELKKKFDAIFGTTEYNRVIEKLIKISKEYNDRQKEKAGDLKLLE 220
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
N K +A+ K + + R + ++E S+KPI E+L Q+ + ER+ S +
Sbjct: 221 ----NIKSQAEVKHLQLQKVDKSRQDKLAVVDSLENSLKPIYERLDQIAKIERDFSKLKQ 276
Query: 292 Q 292
Q
Sbjct: 277 Q 277
>gi|405962727|gb|EKC28376.1| DNA repair protein RAD50 [Crassostrea gigas]
Length = 616
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 289/589 (49%), Gaps = 95/589 (16%)
Query: 724 LKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEEN 783
LK K++ +P + + +D+ + ++ +LKP+ ENI L+D ++P L++KL ++ E+
Sbjct: 18 LKNKLRMVPSKLLKTEKDLDEYRTKYDAMMQLKPLKENITTLEDKEVPELKNKLKKINED 77
Query: 784 VIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+ + + +++ + L T + +++A +Q D+ ++D+ E+ L++++ + +K+SG
Sbjct: 78 ITKLREDIQTKEEDLHTQEQDDESAKQIQPDIVMMDRYQGEVTELEKKISTEGAKLSGGD 137
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQG 903
S L V+ ++++ + ++++ +++S + ++N + E++Q L+ + N + S++L +
Sbjct: 138 SDRT-LQDVINEKEDLQLKVDSSNKQLDSLRQKINLYTEEVQRLKSEVNQLTSEKLQIDS 196
Query: 904 GAGMLKSLEDRKCELEGMDSVYQTE----LEELGRKVAPI----ETQLNLAQSELDALKK 955
LE+ K + + Y E LE+L R+ I E Q+ ++E+D +K
Sbjct: 197 DLQQRNKLEEDKAKSLSENDQYNKEIMNQLEKLKREKEKILQEKEEQMEHMKNEVDRVKN 256
Query: 956 EHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDII 1015
+ K VK + LEI NY + G L ++ + ++ ++ +
Sbjct: 257 DTAK------------------VKNVNLEIKNYNQSGKAELLEENKKRLTQIEEKAAEKE 298
Query: 1016 AKRGVCERTINEINQSIANQSLEEIDLKNNLTLL-------EKKEAVAKLNEEL------ 1062
+ ++N++ +A + E +L +NL L +KKE++AKL EL
Sbjct: 299 EESKDYTASLNKLRDELAKNAERERELTDNLRLRRHLQDIEKKKESIAKLESELGGIDAK 358
Query: 1063 ----KLSEIMIS--DLTKYHHTLENCVIKYHSQKMRSINRLIREYWT--------RIYQL 1108
+ +M +L K EN + H + ++ L + + ++ L
Sbjct: 359 HLERERRRLMAEQQELLKEKQLSENRRMALHGELSSLLSELKSDMYKNAGTKFRDKMIVL 418
Query: 1109 KLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGT 1168
K +E+ SDL KY+ L+ ++ YH+ KM IN++IRE W Y+GNDI+ I I +D
Sbjct: 419 KTTELASSDLEKYYKALDKAIMSYHNMKMDEINKIIRELWRNTYKGNDIETIEIRSDEDE 478
Query: 1169 GS--EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI--------------- 1211
+ RRTYNYRVV K DMR RCSAGQ+VLA LIIR+ +
Sbjct: 479 AGLMKARRTYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRMALAETFCLNCGILALDE 538
Query: 1212 ------------------------SDQKNFQLIVITHDEEFIENLTAID 1236
S QKNFQL+VITHDE+F+E L D
Sbjct: 539 PTTNLDRENIESLALALVEIIKSRSSQKNFQLVVITHDEDFVELLGRSD 587
>gi|157871564|ref|XP_001684331.1| RAD50 DNA repair-like protein [Leishmania major strain Friedlin]
gi|68127400|emb|CAJ05024.1| RAD50 DNA repair-like protein [Leishmania major strain Friedlin]
Length = 1360
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 183/710 (25%), Positives = 316/710 (44%), Gaps = 152/710 (21%)
Query: 700 NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
E C +C R F+SD S+ + + + + PE + ++ + +SL++L+ V
Sbjct: 692 GERMCAVCERPFDSDDSLESFLTRKADRQRTSPETLAAVQAAVNTTREAYQSLEKLQSVV 751
Query: 760 ENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK----------------- 802
+ + + IP L ++L LE+ + + + E +++ A + +
Sbjct: 752 VTVRQNRHR-IPVLEAELDALEDKMKQNRAEQREVCAARDAAQHEVHQLDTMYQHLCMVC 810
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV---------DLDQVL 853
T + ++L+ L +++ Q+ E Q SG +TG +L +
Sbjct: 811 TMGERTVALRDTLARKEKDFEAAQAEQQPHETQRKWGSGDGATGRAEPAPCSYEELCEAY 870
Query: 854 AQQKEKKNELN---TFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS 910
A E+ ++LN T ++E GQ + N + LQ++K + ++ V L
Sbjct: 871 AAATERLHKLNRQFTEAQRMERGQ----AENAAERELQERKAAMLQAEVAV----AKLDD 922
Query: 911 LEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQD 970
LE EL+ + ++T +EEL R+ A + + Q + L+ E +K E +
Sbjct: 923 LESAARELQEEAAQHRTRVEELKRQAAEAQHSVEAHQQRVLQLRAERQKTEAAERGALDT 982
Query: 971 YTKQLEEVKRIKLEILNYTKRGTLTQLAALR------ESVQKLNQRKEDIIAKRGVCERT 1024
KQL E++ +L+Y G QL LR ES K + ++E+ +A R
Sbjct: 983 AEKQLRELQLSLPPVLSYLHNGCARQLEELRMHLRETESAYKASAQEEEGLASR------ 1036
Query: 1025 INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDL-TKYHHTLENCV 1083
+ E +++++Q D+ ++ +L+++ ++A L E ++ L + H +E +
Sbjct: 1037 MKEARKTLSDQHRRSADMDRHIDVLQQEASIAADEAHLAEMERTLASLKSDRLHDVEQLL 1096
Query: 1084 IKYHSQ------------------KMRS------------INRLIRE------------Y 1101
K Q K+R+ +N+L ++ Y
Sbjct: 1097 GKEARQASLATLREMITAKITSLEKIRAQQDGNTEAMLLDVNQLKQQLRGDKYQNIEKRY 1156
Query: 1102 WTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
+ +++ +EI I D+ KY+ LE V YH +K+ IN++I E W R Y+G+DID +
Sbjct: 1157 RSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIAELWRRTYRGSDIDTVE 1216
Query: 1162 IAADVGTGSE--KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
I ++ + RR+YNYRVV K+ E DMR RCSAGQ+VLAC+IIRL
Sbjct: 1217 IRSETEGTTTTTARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLACIIIRL---------- 1266
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA---S 1276
AL+E F +CGI ALDEPTTNLD NA +
Sbjct: 1267 -----------------------------ALSEAFCCDCGILALDEPTTNLDGDNARSLA 1297
Query: 1277 DQ-----------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKG 1313
D K+FQL+VITHDE+F+ L ++++ Y V +D +G
Sbjct: 1298 DALRTLIQARRAVKHFQLVVITHDEQFVRALGGQSLEKFYYVH--KDREG 1345
>gi|74184416|dbj|BAE25735.1| unnamed protein product [Mus musculus]
Length = 486
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 186/330 (56%), Gaps = 31/330 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S KN K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKNKKTEFKTLEGVITRMKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I + + S E + + E+ ++P+ +L ++ E N+S +M + K
Sbjct: 218 EKACEIRDQITSKEAQLASSQEIVRSYEDELEPLKNRLKEI---EHNLSKIMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAEL 325
E + +++ +ELE ++++F G +L
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQL 304
>gi|291229744|ref|XP_002734833.1| PREDICTED: DNA repair protein RAD50-like [Saccoglossus kowalevskii]
Length = 407
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 191/351 (54%), Gaps = 34/351 (9%)
Query: 1 MALLDQLHIMGIRNF-PADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA +D+L I GIR+F P ++++ V++F PLTLIVG+NG GKTT+IEC+K+A T + P G
Sbjct: 1 MASVDKLSIQGIRSFGPKEEDKQVIKFFTPLTLIVGQNGAGKTTVIECLKYATTGDMPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G++ FVHDP+I + E VKL N V V R+
Sbjct: 61 -SRGQSHA------------------FVHDPKIANELEVRGQVKLSFKDVNAKGVVVCRN 101
Query: 119 LLLSNKNGKDNCATRDTTISR-KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
++ + K K T ++T++R K F VQ + C EM +GVSKA+LNNVIF
Sbjct: 102 IVATQKVKKVEFKTLESTLTRAKDFGEKVQISSKCADLN--FEMIGCLGVSKAVLNNVIF 159
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE ++WPL E K +K FDEIF AT+Y K L+ I R ++++ I+ YQA + Y
Sbjct: 160 CHQEEANWPLSESKALKTKFDEIFAATRYIKTLDHI---RKFKQEQLGSIR-EYQAEIKY 215
Query: 238 KKEADSKKQLIYNNTQKRDQSF----EELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
K+ K I +N K + E ++ I+E ++P+ KL + +KE ++ + +
Sbjct: 216 LKQNKEKATEIKDNISKAEARLAATTETVNKIKEQLEPVKNKLEDIAQKEGSIYELEKKV 275
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQ--SKLNLFKINLDEKCSE 342
+ ++ ++ + + ELE+ I+ F Q KL F + ++ C+E
Sbjct: 276 ENLESGKEQMDRNQRELEAKIEHFFEDICLAYQRIGKLTYFSLCVEGLCAE 326
>gi|302822980|ref|XP_002993145.1| ATP-binding cassette transporter, subfamily I, member 3, SmABCI3
[Selaginella moellendorffii]
gi|300139036|gb|EFJ05785.1| ATP-binding cassette transporter, subfamily I, member 3, SmABCI3
[Selaginella moellendorffii]
Length = 1248
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 169/651 (25%), Positives = 295/651 (45%), Gaps = 115/651 (17%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CP C R F + V+K + K ++ + + + + L +L+P++E
Sbjct: 622 CPCCERPFATPEEEDEFVDKQRVKRSSTAQRLHELASLTSIADNKFQQLDKLRPLFEEYQ 681
Query: 764 KLQDTDIP----SLRSKLIELEENVIETKGE----LKKLKTALETPKTKEKTALSLQGDL 815
KL+ I S+ +ELE + ET+ + L + K L TA S++
Sbjct: 682 KLESQGISATEKSISDMTMELERST-ETQNDVSCLLAQSKAELGLVTELRITAQSIEEAY 740
Query: 816 TLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQT 875
T + RE+ TLQ +L ES + G +L++ Q +E +L+ + + + +
Sbjct: 741 TSVQNLEREVRTLQNQL-NPESSLRSPDDVGEELEKHEKQLEELNRKLDRLKEEHDYMKD 799
Query: 876 RLNSHNEKLQSLQKQKNDIHSK----QLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEE 931
L + ++ + + +K D+ K + + A ++K ++ +D+ Q E+E+
Sbjct: 800 DLANCKQRKHAEEMKKADLEKKLERNKALKEEEASLVK-------QMNQIDTEIQFEMEQ 852
Query: 932 LGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEI-----L 986
L P+ + E D LK++ +++ + + D+ K++ + I +I
Sbjct: 853 L----EPLAEEKERHLKEFDQLKRKFRQEQDVSTQGVNDFDKEVHSLTNIWGKIKEYACS 908
Query: 987 NYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNL 1046
+Y +R + + + +L +K++ +K+ C + +N +A Q + E ++ +N+
Sbjct: 909 SYVERHKTHNVQTAKRRLSELQAQKDEEESKKSFCLAEVQRVNNVLAQQKVIERNIADNI 968
Query: 1047 -----------------TLLEKKEAVA-------KLNEELKLSEIMISDLTKYHHTL--- 1079
L E+ A+ +L + LK + ++ + +++ T+
Sbjct: 969 KYRKLCAEEQKCIQEIKALEERMLAIGNTLDFEGELKKALKEKQHLMGEESRHKGTIAVH 1028
Query: 1080 -ENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMR 1138
N K + + Y ++ QLK E+ DL KY++ L+ ++++H+ KM
Sbjct: 1029 ESNIARNKADLKQPQYKNIDKRYRAQLIQLKTMEMANKDLDKYYNALDRALMRFHTMKME 1088
Query: 1139 SINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSA 1197
IN++I+E W + Y+G DID+I I AD GTG+ R+Y+YRVV + G E +MR RCSA
Sbjct: 1089 EINKIIKELWQQTYRGQDIDFIEIRADAEGTGT---RSYSYRVVMRAGGAELEMRGRCSA 1145
Query: 1198 GQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRN 1257
GQ+VLA LIIRL ALAETF N
Sbjct: 1146 GQKVLAALIIRL---------------------------------------ALAETFCLN 1166
Query: 1258 CGIFALDEPTTNLDIKNASD--------------QKNFQLIVITHDEEFIE 1294
CGI LDEPTTNLD +NA Q+NFQLIVITHDE F +
Sbjct: 1167 CGILTLDEPTTNLDAQNAESFAAALLRIMEERRGQENFQLIVITHDERFAQ 1217
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 96 ETHAIVKLQC-TCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQ 154
ET +KL+ T D VC+ RS L+ K K ++ + TG + L
Sbjct: 6 ETKGQIKLRFRTASGKDVVCI-RSFQLTQKASKMEYKAIESVLQTINTHTGEKVCLSYRC 64
Query: 155 QESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
+ E+ L+GVSKAIL NVIF HQ+ ++WPL E +K+ FD+IF AT+Y KAL+ IK
Sbjct: 65 ADMDREVPALMGVSKAILENVIFVHQDEANWPLSEASVLKKKFDDIFSATRYTKALDVIK 124
>gi|390346714|ref|XP_003726611.1| PREDICTED: DNA repair protein RAD50-like [Strongylocentrotus
purpuratus]
Length = 440
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 195/365 (53%), Gaps = 33/365 (9%)
Query: 1 MALLDQLHIMGIRNFPADKN--RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +++L I GIR+F D +V++F PLTLIVG+NG GKTTIIEC+K+ + E+P G
Sbjct: 1 MSSVEKLSIQGIRSFGQDDGDRQVIQFFHPLTLIVGQNGAGKTTIIECLKYICSGEFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G F+HDP++ + E A VKL+ + V V RS
Sbjct: 61 ---------------------SKGAAFIHDPKVAHETEVKAQVKLRFKDKAGKDVVVTRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ + K K + + TI R + G + ++ E EM +GVSK +L+NVIFC
Sbjct: 100 LVATQKIKKIEFKSLEGTILR-VDNFGDKHSISSRCAEIDREMVESLGVSKPVLSNVIFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKE-IPEIKAHYQATLNY 237
HQE+++WPL +GK +K FDEIF AT+Y KALE+I+ +LR E +I+ + T +
Sbjct: 159 HQEDANWPLSDGKTLKGKFDEIFAATRYIKALETIR----KLRTEQSGQIREYILETRHL 214
Query: 238 KKEADSKKQLI--YNNTQKRDQSFE-ELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K + KQL ++ + R ++ E + I + +KP+ E+ L K ++ ++ +
Sbjct: 215 KDWREKAKQLSRELDDKKARLEAAEGSVTKINDQLKPVEEQYDDLVRKSYQITKLANEVA 274
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
+ E+D + + +E ++ +F G EL+ + + + EK +L+ E K + +
Sbjct: 275 KYEGEKDQLIKGMKSVEDQLETIFQGSVDELRRIYSAHQSKITEKEHQLQENEG-KKRIL 333
Query: 355 QEEKQ 359
QE Q
Sbjct: 334 QESAQ 338
>gi|50550759|ref|XP_502852.1| YALI0D15246p [Yarrowia lipolytica]
gi|49648720|emb|CAG81040.1| YALI0D15246p [Yarrowia lipolytica CLIB122]
Length = 1292
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 201/756 (26%), Positives = 332/756 (43%), Gaps = 172/756 (22%)
Query: 645 TLAELMDRMELVLGSK-----PFEDELDRVT--LELKREQEEVSMMTSTQYLFNSYIGKL 697
TL+EL + + VLG +E L+ ++ LE+ + E +M T+ Y + K
Sbjct: 602 TLSELYETISAVLGEGEDNIDDYESTLENLSNDLEVATQNRESTMFTARYYETAVKLAKS 661
Query: 698 EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKP 757
++ C LC+R F SD + + ++ K +P D + + Q++K
Sbjct: 662 AQH--NCLLCSRKF-SDTELTDFLAHVEEKTISLP----------DTKERADKEYQDIKS 708
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLK-------TALETPKTKEKTALS 810
++N+ + ++ R+ L+E+V +LKKLK +A E + S
Sbjct: 709 DFDNVQGIS-GEVREWRN----LKESVESVSAQLKKLKQEVVEGQSAFEKEEESLSLLES 763
Query: 811 LQGDLTLLDQNIRELNTLQRELERQESKIS---GMRSTGVDLDQVLAQQKEKKNELNTFR 867
DL +L + + ++ L+ ++ +E +++ G ST +D + E ++L +
Sbjct: 764 QLRDLEVLKKAVEDVKRLKSDVASKEKELTDFEGEFSTLMDFSE------ESTSDLPSLA 817
Query: 868 SKIESGQTRLNSHNEKL----QSLQKQ----KNDIHSKQLTVQGGAGMLKSLEDRKCELE 919
S + S +N +KL ++L+KQ + I K+L++ L +K L+
Sbjct: 818 SSLNSQIKSINQKRQKLVDDREALRKQFSSLQGQISDKKLSLSTQKNQLT----KKTGLQ 873
Query: 920 GMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVK 979
S +T++EE ++ + ++ + +L +LK E + G K++ + +LE+VK
Sbjct: 874 QQISGLKTKIEECRARIRTVREEIESIEPKLQSLKNELSEMRVTNGDKMEAISDKLEDVK 933
Query: 980 RIKLEILNYTKRGTLTQLAALRESVQKLNQ-----------RKEDIIAKRGVCE---RTI 1025
QL+ + + +Q+L + R+ D + +G E + I
Sbjct: 934 ------------NDANQLSHMSQQIQQLEELDIASMLTKTGRRAD--SAKGEVENLTQRI 979
Query: 1026 NEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIK 1085
++ + IA Q IDLK + L+ V +L E+ E I +L + + +
Sbjct: 980 TQLGEDIATQEKALIDLKGHQRNLQDNLEVRRLTNEMSQIEGRIRELDETKAVRDRDEYQ 1039
Query: 1086 YHSQKMRS-------------------------INRLIREYWTRIYQ--------LKLSE 1112
SQ++RS +N ++ + +++ LK +
Sbjct: 1040 QKSQQLRSQHSAYSSKHAGLLGEMRQMDDQLRNLNVELKSEFLDVHEKYRKALILLKTTT 1099
Query: 1113 IMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG-TGSE 1171
+ DL KY L++ +++YHS KM IN +I E W Y G DID I I +D G+
Sbjct: 1100 VANEDLGKYGKALDSAIMQYHSMKMNEINTIIDELWKATYSGTDIDTILIRSDEDKPGAA 1159
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIEN 1231
K R+YNYRVV K+ E DMR RCSAGQ+VLA +IIRL
Sbjct: 1160 KNRSYNYRVVMVKSDAELDMRGRCSAGQKVLAAIIIRL---------------------- 1197
Query: 1232 LTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA--------------SD 1277
ALAE F NCG+ ALDEPTTNLD N S
Sbjct: 1198 -----------------ALAECFGINCGMIALDEPTTNLDSDNIESLAKGLSNIIDARSS 1240
Query: 1278 QKNFQLIVITHDEEFIENLTA---IDRAY-VVRIVR 1309
QKNFQLIVITHDE+F+ ++ A D Y V R VR
Sbjct: 1241 QKNFQLIVITHDEKFLTHMAASKHTDHFYRVSRNVR 1276
>gi|190402278|gb|ACE77687.1| DNA repair protein RAD50 (predicted) [Sorex araneus]
Length = 513
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 181/327 (55%), Gaps = 25/327 (7%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELLAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MMCTQKSKKTEFKTLEGVITRTKHGEKVSISSKCAEIDR--EMISSLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I N + S E + + E + P+ +L ++ + + + + + ++
Sbjct: 218 EKACEIRDQITNKEAQLASSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALES 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAEL 325
+ +++ ELE ++++F G +L
Sbjct: 278 RKKQMEKDNRELEQKMEKVFQGTDEQL 304
>gi|209946156|gb|ACI97309.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 152/286 (53%), Gaps = 34/286 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERD 301
D + EE MKPI +LV++ RN YQ D
Sbjct: 218 DAIKAQCSECEEEMKPIEARLVEI----RNXXFEIGXYQAXXXXXD 259
>gi|312377980|gb|EFR24675.1| hypothetical protein AND_10572 [Anopheles darlingi]
Length = 352
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 183/372 (49%), Gaps = 45/372 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRV----------------------VRFQRPLTLIVGENGC 38
M+ + +L I GIR+F D V + F PLTLIVG+NGC
Sbjct: 1 MSTVSKLEIRGIRSFGVDSADVQVRIRFSGRRTKNLPSFLYLQKITFTTPLTLIVGQNGC 60
Query: 39 GKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETH 98
GKTT+IEC+K+ LT E P G + G IG FVHDP+I E+
Sbjct: 61 GKTTVIECLKYGLTGELPPGTNRG--------IG------------FVHDPKIFNTVESL 100
Query: 99 AIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESV 158
VKL ++V +RS+ + K T D+T+ + T +KN + +
Sbjct: 101 GQVKLMVKDFMGNSVTAIRSMKTTQKGKLPKFETLDSTVVLEDAKTK-EKNRMTRSRAAD 159
Query: 159 L--EMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQ 216
+ EMC+ +GVSKAILNNVIFCHQE+S WPL+E K +K FD IF T+YN+ ++ +
Sbjct: 160 INNEMCDAMGVSKAILNNVIFCHQEDSCWPLEEPKVLKNRFDAIFGTTEYNRLIDKLMKS 219
Query: 217 RDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKL 276
L + E + K + + K+ + + T+K D +++ ++ + PI EKL
Sbjct: 220 SKELNDQQKEKLGDLKLLKELKVQTELKRVQLEDATRKHDALQQKIGDLASDIGPIVEKL 279
Query: 277 VQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINL 336
L ER S + + K++ + +L+S IK LFSG EL+ ++ +F+
Sbjct: 280 ENLARIEREYSSLVGKRIDLKSKIQSKNDEQQKLKSKIKHLFSGSFVELEGEIRMFQQKT 339
Query: 337 DEKCSELENQER 348
K ELE + R
Sbjct: 340 TTKQDELEWKNR 351
>gi|390459672|ref|XP_002744663.2| PREDICTED: DNA repair protein RAD50 [Callithrix jacchus]
Length = 510
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 182/331 (54%), Gaps = 33/331 (9%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MICTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF A +Y KALE+++ R +++ E YQ L Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSAARYIKALETLRQVRQTQGQKVKE----YQMELKYL 213
Query: 239 KEADSKKQLIYNN-TQKRDQ---SFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQ 294
K+ K I + T K Q S E + + E + P+ +L ++ + + + +
Sbjct: 214 KQNKEKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMRLDNEIK 273
Query: 295 TKKTERDMIQESCNELESSIKQLFSGDKAEL 325
++ + +++ +ELE ++++F G +L
Sbjct: 274 ALESRKKQMEKDNSELEQKMEKVFQGTDEQL 304
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 29/144 (20%)
Query: 1156 DIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFIS 1212
DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+ + LIIRL ++
Sbjct: 358 DIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKATS-LIIRLALA 416
Query: 1213 DQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDI 1272
+ +I DE T +DR + + AL E I
Sbjct: 417 ETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI------------------I 451
Query: 1273 KNASDQKNFQLIVITHDEEFIENL 1296
K+ S Q+NFQL+VITHDE+F+E L
Sbjct: 452 KSRSQQRNFQLLVITHDEDFVELL 475
>gi|49901446|gb|AAH76425.1| Im:6906849 protein, partial [Danio rerio]
Length = 409
Score = 169 bits (429), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 171/328 (52%), Gaps = 25/328 (7%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ V+ F PLT++VG NG GKTTIIEC+K+ + ++P G
Sbjct: 1 MSKIEKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYITSGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDP+ + + A ++LQ N D V V RS
Sbjct: 61 ---------------------SKGNTFVHDPKDAHETDVRAQIRLQFRDVNGDAVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + K K T + I+R V + C + + EM + +GVS+A+LN+VIFC
Sbjct: 100 MQCTQKGKKTEFKTLEGVITRIKHGEKVSLSSKCAEIDR--EMISSLGVSRAVLNHVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL EGK +K+ FDEIF AT+Y K LE+++ R + + + + K
Sbjct: 158 HQEESNWPLSEGKALKQKFDEIFSATRYIKVLETLRTLRQKQTNTVKSCQMELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
+A ++L+ + S E ++ IE + P+ +L + + + + +
Sbjct: 218 DKAQEIRELLSTKETQLASSKESVNRIEGQIDPLERRLNDIESSLGKVMKLDNDIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQ 326
+ +++ ELE ++Q+F G +LQ
Sbjct: 278 RKKQMEDDNRELEEKMEQVFQGSDDQLQ 305
>gi|209946204|gb|ACI97333.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 144/262 (54%), Gaps = 30/262 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPINEKLV 277
D + EE MKP +LV
Sbjct: 218 DAIKAQCSECEEEMKPXXXRLV 239
Score = 43.9 bits (102), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 447 QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN 506
Q +I+ L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N+VN
Sbjct: 409 QVKIDELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINQVN 468
Query: 507 SEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK 566
+ +K++D +K+ I E + + +D +++ L + +AE SLK ++
Sbjct: 469 ELYESATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKE 527
Query: 567 -ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
+ K +++ ++ RH F LF N++ S+ + +I + E N ++
Sbjct: 528 LDKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKE 587
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDR 668
+ E N + D R EL D EL+ S P++D L+R
Sbjct: 588 QSYEIKRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLER 630
>gi|412993707|emb|CCO14218.1| DNA repair protein Rad50 [Bathycoccus prasinos]
Length = 1365
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 180/685 (26%), Positives = 303/685 (44%), Gaps = 112/685 (16%)
Query: 655 LVLGSKPF---EDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFF 711
++LG K ED + +V ++K Q+ + M + L Y+ K N CP+CTR F
Sbjct: 686 VLLGDKGLLGVEDAMHKVNEDIKEAQKTMEYMRAGNVLLTDYLQKAVANTA-CPMCTRGF 744
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+ + +L+T I P+Q + I + ++ L L + +L++ IP
Sbjct: 745 PNIKEMSAFEKRLRTIIDAAPDQLEINEKKITECEAKREKLLGLTSIAARYKELKEKRIP 804
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
+ + + ++ + E + + ALE K T +++ D + ++ +ELNTL+ +
Sbjct: 805 AAEDEYKKAQDTLDEACNTELRFQRALEEAKKARDTVVAVVEDAATISRHAQELNTLETQ 864
Query: 832 LER--------QESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEK 883
L +E++I + + DLD A ++ K+N+L R K E L +
Sbjct: 865 LRMMPGGMTSGREAEIRSITAIAGDLDVEQANRENKENQLKVLRRKKERTDNELAQLDRN 924
Query: 884 LQSLQKQKNDIHSKQL-TVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQ 942
+ + D QL T+ SL + K +LE ++E L R++ P+E +
Sbjct: 925 WRDAKDALADAERNQLKTI--------SLREEKKKLERDQDQATRDIETLERELPPLEDE 976
Query: 943 ---LNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA 999
L + E ++K+++ ++++ +Q + + + + R TL ++
Sbjct: 977 KKKLEREREERVKIEKDNEDAVDDKTRTLQKSIDFFDSLNDPIQKYIESNARQTLREIQK 1036
Query: 1000 LRESV--------------QKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN 1045
ES QK + KE + K+ +RT+ E N ++ EE +L+
Sbjct: 1037 SFESADVKIDATLKKLATKQKEYKSKEKSVNKQSEIQRTL-EDNIALQRGKKEEKELEMR 1095
Query: 1046 LTLLEKKEA----VAKLNEELKLSEIMISDLTKYHHTLE------NCVIKYHSQKMRSIN 1095
+ L++ + V L EELK E K H+ LE +K H + RS
Sbjct: 1096 IKELQETASKFGNVKDLGEELKRRE-------KVHNQLEVTKAEAAGQVKTHREMARSSE 1148
Query: 1096 RLIREYWTRIYQLKLS---------EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1146
+ + + +LS E++ SDL +Y+ L+ ++ +HS KM IN++++E
Sbjct: 1149 KELNSAEYKNIDSRLSKETIRFQTLEMVNSDLNRYYTALDKALMAFHSSKMGDINKVVKE 1208
Query: 1147 YWTRIYQGNDIDYISIAADV-----GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
W R Y+G DIDYI I +D TG + +YNYRVV NG E DMR RCSAGQ+V
Sbjct: 1209 LWQRTYRGQDIDYIQIRSDAEKQEGKTGG--KSSYNYRVVMICNGAELDMRGRCSAGQKV 1266
Query: 1202 LACLIIRLFIS---------------------------------------DQKNFQLIVI 1222
LACLIIRL ++ +Q+NFQLIVI
Sbjct: 1267 LACLIIRLALAETFCLNCGILALDEPTTNLDTPNAESLARSLIDIMHSRREQENFQLIVI 1326
Query: 1223 THDEEFIENLTAIDRA-YVVRIVRD 1246
THD EF L +A Y R+ +D
Sbjct: 1327 THDVEFAHMLGQRQQADYYWRVTKD 1351
>gi|298712757|emb|CBJ33353.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 442
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 165/312 (52%), Gaps = 30/312 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA + +L I GIR+F ++ +V+ F PLT+IVG NGCGKTTIIEC+K+A T P GA
Sbjct: 1 MASIHKLSIRGIRSFSHEREQVIEFYTPLTMIVGANGCGKTTIIECLKYACTGALPPGAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G++FVHDP++ SG N E A +KL+ + + V+RS
Sbjct: 61 NGQSFVHDPKV---------SGTN-----------EVKANIKLRFSARDKTVGVVIRSFQ 100
Query: 121 LSNKNGKDNCATRDTTI-SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K D I ++ V N C + + + + +GVSKAIL NV+FCH
Sbjct: 101 LTQKRKTLQFKALDGVIRTKNESGQSVSINHKCTEMDKHIPL--RLGVSKAILENVVFCH 158
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
QE++SWPL EG VK+ FD+IF++ +Y KAL++IK + + E+K A +
Sbjct: 159 QEDASWPLQEGAVVKKKFDDIFESARYTKALDNIKKTKQEYASTVKELKVDLAALQERLR 218
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
A+ K+ + D S E + + ++ I+ + +L+E + ++ + + +
Sbjct: 219 AANDLKEEM-------DASTETYSTLRQEIEAIDARTAELSESLEKLRAVADEVRMLEGR 271
Query: 300 RDMIQESCNELE 311
+ + +C +L+
Sbjct: 272 KQSLLLACRDLD 283
>gi|209946176|gb|ACI97319.1| RAD50 [Drosophila melanogaster]
Length = 633
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 142/257 (55%), Gaps = 30/257 (11%)
Query: 23 VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSG 82
++F P+TLI+GENGCGKTT++EC+K+ALT E P G+ GK+FVH
Sbjct: 1 IKFSSPVTLILGENGCGKTTVVECLKYALTGECPPGSDRGKSFVH--------------- 45
Query: 83 KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIF 142
DP+I +E A +K+Q V + R++ +S K K + T D+TI+ F
Sbjct: 46 -----DPKIFGLNEVLAQIKMQVRDRRGAQVSICRTMKVSKKRNKMSFETMDSTIN---F 97
Query: 143 ATGV-------QKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKE 195
TG Q +L + + + + +GVSKAI+NNV+FCHQE+SSWPLDE KK+KE
Sbjct: 98 LTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAIINNVLFCHQEDSSWPLDESKKLKE 157
Query: 196 IFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKR 255
FD IF T+YNKAL+ I R +E+ +A+ + K+E + K + +K
Sbjct: 158 KFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANIKHVAYLKQEMEVKTLNLQKAQRKC 217
Query: 256 DQSFEELHNIEESMKPI 272
D + EE MKPI
Sbjct: 218 DAIKAQCSECEEEMKPI 234
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 447 QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN 506
Q +I+ L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N++N
Sbjct: 409 QVKIDELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINQIN 468
Query: 507 SEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK 566
+ +K++D +K+ I E + + +D +++ L + +AE SLK ++
Sbjct: 469 ELYESATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKE 527
Query: 567 -ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
+ K +++ ++ RH F LF N++ S+ + +I + E N ++
Sbjct: 528 LDKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKE 587
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDR 668
+ E N + D R EL D EL+ S P++D L+R
Sbjct: 588 QSYEIKRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLER 630
>gi|222622903|gb|EEE57035.1| hypothetical protein OsJ_06817 [Oryza sativa Japonica Group]
Length = 1614
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 169/654 (25%), Positives = 293/654 (44%), Gaps = 119/654 (18%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ----RSLQELKPVY 759
CP C R F P ++ K + E T ++ I C + L +L Y
Sbjct: 986 CPCCQRAF-----TPDEEDEFVKKQRTTCESTADRMNKISLECSNAEDFFQQLNKLNATY 1040
Query: 760 ENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLD 819
E +KL IP L +L + E + L K + L + +D
Sbjct: 1041 EEFVKLGKEAIPLAEKNLKQLLADESEKAQTFDDFVSVLAQVKMDKDAVQVLLQPVETID 1100
Query: 820 QNIRELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKEKKNELNTFRSKIESGQTRLN 878
++++E+ L ++E E K+ +R GV L+Q+ + + +T ++++ + +
Sbjct: 1101 RHVQEIQQLGPQVENLEYKLD-VRGQGVKSLEQIQLELNSVQRTRDTLNNEVDDLRDQQR 1159
Query: 879 SHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAP 938
+ + L + Q + +DI ++L G + E+ L E + L + P
Sbjct: 1160 TLTDGLTNAQMRWHDIREEKLKASGAVHKFQKAEEDLGHLAEEKEKLTLEEKHLEESLGP 1219
Query: 939 IETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVK----RIKLEILNYTKRGTL 994
+ + E +ALK++ ++ ++ + +++ ++++ ++ RIK LN K L
Sbjct: 1220 LSKERESLLQEHEALKEKLDQEYHQLAERKREFQQEIDALETHNERIK-GYLNSKKGEKL 1278
Query: 995 TQL----AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLE 1050
+L L+ +QK +RKE+ A+ +++ + + +Q + ++ +NL
Sbjct: 1279 NELQEKHTQLQSDLQKSKERKEEKSAE-------LSKNKELLKSQDQLKRNIDDNLNYRR 1331
Query: 1051 KKEAVAKLNEELKLSEIMI----------SDLTKYHHTLENCVIKYH-SQKMRSINR--- 1096
K+ V +L E++L E I +DL ++ + + +Y+ Q +S+ +
Sbjct: 1332 TKDEVERLTHEIELLEDKILSIGSLSTIEADLKQHSQEKDRLLSEYNRCQGTQSVYQSNI 1391
Query: 1097 --------------LIREYWTRIYQLKL-------SEIMISDLTKYHHTLENCVIKYHSQ 1135
+ + Y+ ++ QLK+ +E+ DL +Y+ L+ ++++H+
Sbjct: 1392 SKHKLELKQTQYKDIEKRYFNQLLQLKVDGMNVQTTEMANKDLDRYYAALDKALMRFHTM 1451
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
KM IN++I+E W + Y+G DIDYISI +D G G+ R+Y+YRVV + E +MR R
Sbjct: 1452 KMEEINKIIKELWQQTYRGQDIDYISINSDSEGAGT---RSYSYRVVMQTGDAELEMRGR 1508
Query: 1195 CSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETF 1254
CSAGQ+VLA LIIRL ALAETF
Sbjct: 1509 CSAGQKVLASLIIRL---------------------------------------ALAETF 1529
Query: 1255 SRNCGIFALDEPTTNLDIKNASD--------------QKNFQLIVITHDEEFIE 1294
NCGI ALDEPTTNLD NA Q+NFQLIVITHDE F +
Sbjct: 1530 CLNCGILALDEPTTNLDGPNAESLAGALLRIMESRKGQENFQLIVITHDERFAQ 1583
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 118/215 (54%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FV HDP++ + ET +KL+ T D VC +RS
Sbjct: 61 SGHTFV--------------------HDPKVAGETETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
>gi|218190791|gb|EEC73218.1| hypothetical protein OsI_07303 [Oryza sativa Indica Group]
Length = 1323
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 168/650 (25%), Positives = 290/650 (44%), Gaps = 111/650 (17%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CP C R F D V K +T + E+ N + L +L YE +
Sbjct: 695 CPCCQRAFTPDEE-DEFVKKQRTTCESTAERMNKISFECSNAEDFFQQLNKLNATYEEFV 753
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIR 823
KL IP L +L + E + L K + L + ++D++++
Sbjct: 754 KLGKDAIPLAEKNLKQLLADESEKAQTFDDFVSVLAQVKMDKDAVQVLLQPVEVIDRHVQ 813
Query: 824 ELNTLQRELERQESKISGMRSTGV-DLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNE 882
E+ L ++E E K+ +R GV L+Q+ + + +T ++++ + + + +
Sbjct: 814 EIQQLGPQVENLEYKLD-VRGQGVKSLEQIQLELNSLQRTRDTLNNEVDDLRDQQRTLTD 872
Query: 883 KLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQ 942
L + Q + +DI ++L G + E+ L E + L + P+ +
Sbjct: 873 GLTNAQMRWHDIREEKLKASGAVHKFQKAEEDLGHLAEEKEKLTLEEKHLEESLGPLSKE 932
Query: 943 LNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVK----RIKLEILNYTKRGTLTQL- 997
E +ALK++ ++ ++ + +++ ++++ ++ RIK LN K L +L
Sbjct: 933 RESLLQEHEALKEKLDQEYHQLAERKREFQQEIDALETHNERIK-GYLNSKKGEKLNELQ 991
Query: 998 ---AALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEA 1054
L+ + K +RKE+ A+ +++ + + +Q + ++ +NL K
Sbjct: 992 EKHTQLQSDLHKSKERKEEKSAE-------LSKNKELLKSQDQLKRNIDDNLNYRRTKAE 1044
Query: 1055 VAKLNEELKLSEIMI----------SDLTKYHHTLENCVIKYH-SQKMRSINR------- 1096
V +L E++L E + +DL +Y + + +Y+ Q +S+ +
Sbjct: 1045 VERLTHEIELLEDKVLSIGSLSTIEADLKQYSQEKDRLLSEYNRCQGTQSVYQSNISKHK 1104
Query: 1097 ----------LIREYWTRIYQLKL-------SEIMISDLTKYHHTLENCVIKYHSQKMRS 1139
+ + Y+ ++ QLK+ +E+ DL +Y+ L+ ++++H+ KM
Sbjct: 1105 LELKQTQYKDIEKRYFNQLLQLKVDGMNAQTTEMANKDLDRYYAALDKALMRFHTMKMEE 1164
Query: 1140 INRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
IN++I+E W + Y+G DIDYISI +D G G+ R+Y+YRVV + E +MR RCSAG
Sbjct: 1165 INKIIKELWQQTYRGQDIDYISINSDSEGAGT---RSYSYRVVMQTGDAELEMRGRCSAG 1221
Query: 1199 QRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNC 1258
Q+VLA LIIRL ALAETF NC
Sbjct: 1222 QKVLASLIIRL---------------------------------------ALAETFCLNC 1242
Query: 1259 GIFALDEPTTNLDIKNASD--------------QKNFQLIVITHDEEFIE 1294
GI ALDEPTTNLD NA Q+NFQLIVITHDE F +
Sbjct: 1243 GILALDEPTTNLDGPNAESLAGALLRIMESRKGQENFQLIVITHDERFAQ 1292
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 120/215 (55%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
>gi|348545460|ref|XP_003460198.1| PREDICTED: DNA repair protein RAD50-like [Oreochromis niloticus]
Length = 1394
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 285/603 (47%), Gaps = 45/603 (7%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ V+ F P+T++VG NG GKTTIIEC+KFA + E P G
Sbjct: 1 MSKINEMSILGVRSFGIEDKDKQVISFFTPVTVLVGPNGAGKTTIIECLKFATSGELPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G FVHDP+ ++ A ++L + + + + R
Sbjct: 61 ---------------------SKGGAFVHDPKDAQRTVVRAQIELSLSDIKGEEIEIQRF 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGC--LQQESVLEMCNLIGVSKAILNNVI 176
+ S K + + + I R V +++ C L QE C L GVSK++LN+VI
Sbjct: 100 MSCSLIENKYSFKSEEQNIKRAKDGRRVSRSVKCGDLHQEIT---CAL-GVSKSVLNDVI 155
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQE S+WPL E + +KE FD IF+ TKYNKA + + LR + QA L+
Sbjct: 156 FCHQEESNWPLSEDRVLKEKFDSIFNVTKYNKA----RAKMYELRLKQSRTVERCQAELS 211
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEE-----LHNIEESMKPINEKLVQLTEKERNMSVMST 291
Y ++ K Q + +N ++ LH IE + P+ L + K N++ +
Sbjct: 212 YLEKNKEKAQQLRDNVAQKQADLRASRDLILH-IENQIDPLETLLSNIKMKLENVTKLEN 270
Query: 292 QYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSEL-ENQERLK 350
+ + + R ++E ELE +++++F G +LQ + + EK +L ++QE L
Sbjct: 271 EIKALDSLRKQMEEHNKELEETMEEVFQGSDEQLQHTYENHQRTVREKEQKLQQHQEEL- 329
Query: 351 SQYIQEEKQSHTHI-NEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
Q +E Q T + N+ ++ G+L+ + E H K + +++L+ L ++ + +
Sbjct: 330 -QTFDQEYQRLTRVTNDLLLEKGRLQHEAERHTKNTEDRDKLVHSLSSCLEMEGYDQLPF 388
Query: 410 TPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQ 469
T + E +++ + L E KQ ++ + K E ++ +
Sbjct: 389 TVSQLESFYHQVTQRLEQEKERVSQLLAELQKLEQQKQQSVDEMRDRKTCTERTVEMKRD 448
Query: 470 QIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWI 529
+ + +++L N+ ++ + S S LQ L+ KL V E S S+ ++LK E++
Sbjct: 449 EQQKKQQELKNITEELQRLQDSSSRLQELENKLAEVEREDAVQSSSV--EELKAEVKKLQ 506
Query: 530 RQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFD 589
++ EL+ +D ++ L L ++ LK K I ++ RH L
Sbjct: 507 SEKVELDCTQRQLDEDMETLNMHTAALTQMDILKKGKAEMEEQILQIRSRHCEDLVSLMG 566
Query: 590 MIP 592
P
Sbjct: 567 HFP 569
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 25/194 (12%)
Query: 1104 RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIA 1163
++ +++ ++++ DL Y L+ ++K+HS KM IN+ IR+ W Y+G DI+YI I
Sbjct: 845 KMIEMRTTQLLSKDLKLYEEALDQAIVKFHSMKMDEINQNIRDLWRSTYRGQDIEYIEIR 904
Query: 1164 ADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVIT 1223
++V SE RR+YNYRVV K + +MR RCSAGQ+VLA LIIRL +++ ++
Sbjct: 905 SEVEERSEGRRSYNYRVVMMKGDADVNMRGRCSAGQKVLASLIIRLALAEAFCLDCGILA 964
Query: 1224 HDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQL 1283
D E T +DR + K+LA+ AL E I+ S Q++FQL
Sbjct: 965 LD----EPTTNLDRENI-------KSLAD---------ALVEI-----IRTRSQQRHFQL 999
Query: 1284 IVITHDEEFIENLT 1297
++ITHDE+F++ L
Sbjct: 1000 LIITHDEDFVQLLV 1013
>gi|426195738|gb|EKV45667.1| hypothetical protein AGABI2DRAFT_223828 [Agaricus bisporus var.
bisporus H97]
Length = 535
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 210/426 (49%), Gaps = 72/426 (16%)
Query: 911 LEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHK---KKLNEEGAK 967
+E+ + +E +++ +Q +EL K + + TQ+ + L+ L HK + + E A+
Sbjct: 147 IEEGEAPIEALNTSFQDSQQELSAKASQVSTQIQELNTSLNKLNHVHKGVERYIKERRAR 206
Query: 968 IQDYTKQLEEVKRIKLEILNYTK-----RGTLTQLAA-LRESVQKLNQRKEDIIAKRGVC 1021
+ T E V ++ LE+ + R +T + + ES + +++I A++ +
Sbjct: 207 ELENTS--ERVDQLDLELQELSAKLNGVREVITDIQKEINESGASVANLRDNIRARKLI- 263
Query: 1022 ERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLEN 1081
R I+E+ + I + +EE+ K EK + V + L+ + + TL+
Sbjct: 264 -REISEVQKEIDSHDMEEM-AKARRNFDEKYKLVKAKEDNLR---VEYGRIRGELDTLQQ 318
Query: 1082 CVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSIN 1141
V KY + ++ + + Y ++ +K+S++ SDL KY L+N ++KYH+ KM +N
Sbjct: 319 QVEKYDTDLKKNFKDINKRYTEQLISVKVSDMANSDLEKYGKALDNAIMKYHTLKMEEVN 378
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
+++ W + YQG DID I I +DV G+ +R+YNYRVV K+ +E DMR RCSAGQ++
Sbjct: 379 DVMKHLWNKTYQGTDIDGIKIKSDV-EGAANKRSYNYRVVMTKDQVEMDMRGRCSAGQKM 437
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
LA +IIRL AL+++F +NCGI
Sbjct: 438 LASIIIRL---------------------------------------ALSDSFGQNCGIL 458
Query: 1262 ALDEPTTNLDIKN-----AS---------DQKNFQLIVITHDEEFIENLTAID-RAYVVR 1306
ALDEPT LD N AS NFQLI+ITHDE F+ L D + +R
Sbjct: 459 ALDEPTNALDTDNIDALAASLVDIINERRTHSNFQLIIITHDENFLRKLGQSDVMEFYMR 518
Query: 1307 IVRDHK 1312
+ RD +
Sbjct: 519 VSRDSR 524
>gi|255071309|ref|XP_002507736.1| Rad50 DNA repair/recombination protein [Micromonas sp. RCC299]
gi|226523011|gb|ACO68994.1| Rad50 DNA repair/recombination protein [Micromonas sp. RCC299]
Length = 1319
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 124/235 (52%), Gaps = 62/235 (26%)
Query: 1095 NRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQG 1154
+RL+R+ + +LK SE++ DL +Y+ L+ ++ +H+ KM INR++RE W R Y+G
Sbjct: 1114 DRLMRQ----VVELKTSEMVSQDLERYYGALDRALMAFHASKMSDINRVVRELWQRTYRG 1169
Query: 1155 NDIDYISIAADVGTGSEK----RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
DIDYI I +D ++K R +YNYRVV E +MR RCSAGQ+VLACLIIRL
Sbjct: 1170 QDIDYIQIRSDDDGAAKKTGGVRSSYNYRVVMVVGDAELEMRGRCSAGQKVLACLIIRL- 1228
Query: 1211 ISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNL 1270
ALAETF NCGI ALDEPTTNL
Sbjct: 1229 --------------------------------------ALAETFCLNCGILALDEPTTNL 1250
Query: 1271 DIKNAS--------------DQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1310
D NA DQ+NFQLIVITHD F + L + A Y RI +D
Sbjct: 1251 DAPNADSLARSLVDIMHSRRDQENFQLIVITHDMHFAQVLGQREHADYYWRITKD 1305
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 137/265 (51%), Gaps = 36/265 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +D++ I GIR+F D + + F +PLTLIVG NG GKTT+IEC+K A T E P A
Sbjct: 1 MCSVDKMLIKGIRSFSPDNDHAIIFPKPLTLIVGRNGAGKTTVIECLKMATTGELPPSAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G+ F+HDP++ N E A +KL+ V RS
Sbjct: 61 AGQAFIHDPKVA-----------NVT---------EVKAQIKLRFRDVRAQPCVVTRSFQ 100
Query: 121 LSNKNG----KDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNN 174
L+ K+G K + TI K TG V + C + + +++GVSKAIL N
Sbjct: 101 LAQKSGGKLEKKDLDQVIQTIDEK---TGEKVSVSRKCADINATVP--DMMGVSKAILEN 155
Query: 175 VIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKE-IPEIKAHYQA 233
V+F HQE+S+WPL E +K+ FDEIF ATKY KALE I RLRKE IK H
Sbjct: 156 VVFVHQEDSNWPLGEAATLKKKFDEIFSATKYTKALEHIG----RLRKEQAAAIKEHKLR 211
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQS 258
N + + D +L + RD++
Sbjct: 212 VENLRLQKDHASKLKDRHDDARDKA 236
>gi|347954550|gb|AEP33775.1| Rad50 [Physcomitrella patens]
gi|347954556|gb|AEP33778.1| Rad50 [Physcomitrella patens]
Length = 1314
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 57/211 (27%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ Y T++ QLK +E+ DL KY+H L+ ++++HS KM IN++++E W + Y+G DID
Sbjct: 1115 KRYSTQLIQLKTTEMANKDLDKYYHALDKALLRFHSMKMEEINKIVKELWQQTYRGQDID 1174
Query: 1159 YISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
+I I +D G G+ R+Y+YRVV + E DMR RCSAGQ+VLA LIIRL
Sbjct: 1175 FIEIRSDAEGMGT---RSYSYRVVMRSGDAELDMRGRCSAGQKVLASLIIRL-------- 1223
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
ALAETF NCGI ALDEPTTNLD NA
Sbjct: 1224 -------------------------------ALAETFCLNCGILALDEPTTNLDTPNAES 1252
Query: 1278 --------------QKNFQLIVITHDEEFIE 1294
Q+NFQLIVITHDE F +
Sbjct: 1253 LATALLRIMEDRRGQENFQLIVITHDERFAQ 1283
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 208/809 (25%), Positives = 361/809 (44%), Gaps = 76/809 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR F + RV+ F RPLTLIVG NG GKTTIIEC+K A T E P +
Sbjct: 1 MSTVDKMLIKGIRAFDPENTRVITFFRPLTLIVGSNGAGKTTIIECLKHACTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG+ F+HDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGQTFIHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ I + + G + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVI-QTLDHNGEKVALSYKCADIDREIPALMGVSKAILENVIFVH 158
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPE-IKAHYQATLNYK 238
Q+ ++WPL E +K+ FD+IF AT+Y KALE +K +L KE + IK + N +
Sbjct: 159 QDEANWPLAEPAILKKKFDDIFSATRYTKALEVLK----KLHKEQAQGIKVYKLKLDNLR 214
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINE---KLVQLTEKERNMSVMSTQYQT 295
D+ + N Q + ++ H I E K I + K+ + E ++ S + +
Sbjct: 215 NLKDAAHKFHENVEQDQGKANFLRHQIRELEKTITDSRRKINVMEEGLKDYSKLKEEINV 274
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER-LKSQYI 354
K++ R M+++ +E + ++ + +L + F NL + L ER LK +
Sbjct: 275 KESVRKMLKKQKDEQQQALHEEIEDTDEDLLTWQKDFNENLAKLRQNLMGSERNLKDAEV 334
Query: 355 QEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEG 414
K S H ++ GKL+ + E ++K+N L+ ++ + L EE
Sbjct: 335 DLRKISDQHTRNYSLQ-GKLQAEVEGNEKVNMELEAEIRKVFAEHNLGNVGTRSLNYEEY 393
Query: 415 EGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINAL--IVEKVELESKIKSFKQQIE 472
L++ + + L R +S + T +AE L V++ E K +
Sbjct: 394 RRLVQ-------RVFQRFEDLNRDYSQLKETNRAETAKLWRAVQQSSEEYLGAKNKVTAK 446
Query: 473 GNKKDLTN-VITQINEVNQSQS------TLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEI 525
+KK T I ++E S S L+ L + ++E+ L+ D + + I
Sbjct: 447 QDKKAATEAAIANLDEDIASGSYAISDNELRRLDAAEKKADAEVKILTSREDDVRYEEVI 506
Query: 526 EAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFH 585
+ R+ +EL+ +L ++ E + ++ LA ++ K E K + L + + A
Sbjct: 507 DDGKREIHELDTKLKILRREKDAVACESADLAALRLRKEELEDKELALQKLLDDNKEAIK 566
Query: 586 LLFDMIPE-ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTL----- 639
+PE ++ K ++ AL + + EK + +++ + +S +L
Sbjct: 567 KALKRLPETKDLKREIETALRVRKENAAETGQKCALAEKEVVKVDSRIHETSLSLAKYQR 626
Query: 640 -RDQKRTLAELMDRMELVLG----SKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYI 694
RD KR + L+ R+E +L F+ +L + + + T + +F+ +
Sbjct: 627 DRDSKRKM--LLGRLESILNLTVEITDFQVQLHEAVKAKENIKSTHDLCTGMKKMFDPF- 683
Query: 695 GKLEENEPRCPLCTRFF----ESDYSVPGLVN--KLKTKIKEIPEQTNNKKTHIDQLCKQ 748
K N CP C R F E ++ +N K++E + + + QL K
Sbjct: 684 EKQARNTHACPCCERGFTPEEEDEFVRKQRINASSYTDKLRESAAKAQEAEVKVQQLDK- 742
Query: 749 QRSLQELKPVYENIMKLQDTDIPSLRSKL 777
L+ ++++ KL + IP+ L
Sbjct: 743 ------LRAIHDDYQKLSNELIPAAEKNL 765
>gi|260948944|ref|XP_002618769.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720]
gi|238848641|gb|EEQ38105.1| hypothetical protein CLUG_02228 [Clavispora lusitaniae ATCC 42720]
Length = 1277
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 165/567 (29%), Positives = 255/567 (44%), Gaps = 123/567 (21%)
Query: 794 LKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKIS------GMRSTGV 847
L ++LET + K + L L + +R + + E+++ E++I G + V
Sbjct: 737 LSSSLETLEASLKKTTAELSSLQSLREPVRAIASDSAEIDKLEAEIKELEGELGDWGSEV 796
Query: 848 DLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTV---QGG 904
+ ++ + QK+K EL R + + + L+ Q I KQL + +
Sbjct: 797 PVYELQSLQKQKAAELRAVRQAVSDATDEFHFLQKDASRLEGQ---IKDKQLLISNLEKA 853
Query: 905 AGMLKSLEDR----------------KCEL-----EGMDSVYQTELEELGRKVAPIETQL 943
G SL+ R +CE E + + E+EEL R IE
Sbjct: 854 LGQTISLQGRITEQEELEKSLKAKIKECETLATEHESLCASLTKEVEELQRSRKEIEES- 912
Query: 944 NLAQSELDALKKEH----------KKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGT 993
A+ E+ ALK E K+ ++ A ++D T++LEEV++ ++E T T
Sbjct: 913 --AKKEIAALKAESDTLERLRADIKEYEEKDAAVVEDNTRKLEEVQK-EIEASKATMENT 969
Query: 994 LTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKE 1053
++ L+ V +R+ + R E E + L E+D+ N E+ E
Sbjct: 970 EARIKQLQAEVNDFKERERQM---RDNMEYRQLEKELDRLEEQLNELDVHNAEVEKERYE 1026
Query: 1054 AVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQ----------KMRSINRLIREYWT 1103
+K KL + IS+LT + E V + Q + + I++ + W
Sbjct: 1027 VASK-----KLRD-QISELTSSLYGKEGEVKQIRDQITNFQKELETEFKDIDKQYHKEWV 1080
Query: 1104 RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIA 1163
+ L+ + ++ +DL Y L+ ++KYHS KM INR++RE W + Y+G DID I I
Sbjct: 1081 K---LQTNMLVSNDLQTYSQALDKAIMKYHSMKMDEINRILRELWNQTYKGTDIDGIEIK 1137
Query: 1164 ADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVIT 1223
DV + S K R+YNYRVV K E DMR RCSAGQ+VL ++IRL
Sbjct: 1138 CDV-SNSGKGRSYNYRVVMYKKSSELDMRGRCSAGQKVLTSILIRL-------------- 1182
Query: 1224 HDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNAS------- 1276
ALAE F +NCG+ ALDEPTTNLD++NA
Sbjct: 1183 -------------------------ALAECFGQNCGMIALDEPTTNLDVENAESLAAALN 1217
Query: 1277 -------DQKNFQLIVITHDEEFIENL 1296
+QKNFQLIVITHDE+F+ ++
Sbjct: 1218 NIIDFRKNQKNFQLIVITHDEKFLSHI 1244
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 118/225 (52%), Gaps = 22/225 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L I GIR+F + ++F PLTLI G+NGCGKTTIIEC+K+A T + P
Sbjct: 1 MSSLYKLSISGIRSFSPTDHETIQFGTPLTLICGQNGCGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FV+DP + + +A +KL + ++ V R++
Sbjct: 59 -------------------SKGGAFVNDPAVADRSLVNAEIKLGFISVDGKSMTVTRNMQ 99
Query: 121 LSNKNGKDNCATRDTTISR-KIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K G T T + + A G + L E + +G S+A+L VIFCH
Sbjct: 100 LARKRGARGANTFKTLEGQLAVMARGHKTALSTKNAELDARVPQYLGASRAVLEYVIFCH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEI 224
Q++S WPL E +K+ FDEIF+A+++ K L++IK R + +I
Sbjct: 160 QDDSLWPLSEAGVLKKRFDEIFEASRFTKVLDTIKTLRKDMASDI 204
>gi|409047440|gb|EKM56919.1| hypothetical protein PHACADRAFT_208087 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1303
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 38/364 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L I GIR+F ++++F P+T++VG NG GKTTIIEC+K+A T + P +
Sbjct: 1 MASLNKLAIRGIRSFDDKDVQIIQFFSPVTVVVGHNGSGKTTIIECLKYAATGKQPPNTN 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ ++E A VKLQ T NN + R+L
Sbjct: 61 GGA---------------------FVHDPKLANENEVKAQVKLQFTAANNSVMEATRNLK 99
Query: 121 LSNKNGKDNCATRDTTI-----SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
++ G D + T++ ++ TG + + E +E+ L GVS+A+L+NV
Sbjct: 100 IT-AGGVDALKSNFTSLEGILSTKGAEGTGKRATISTRCAEMNVEIPQLFGVSQAVLDNV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+S WPL E +K+ FD IF+ATKY KAL++I+ RD+ +E+ K +
Sbjct: 159 IFCHQEDSCWPLAESSVLKKKFDGIFEATKYTKALDAIRSLRDKKAQELRIEKEQLDSLR 218
Query: 236 NYKKEADSKKQLIYNNTQK---RDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
K +D K T+ + ++E N++ + K R + V
Sbjct: 219 LEKTRSDGLKARFSELTRSIAAKSHEYKEAEKKHALKVASNQEFCESFTKSREICVKVDG 278
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDE----KCSELENQER 348
K +E L+ S+++L D+ ELQ +LN FK ++ E + + L++ +
Sbjct: 279 LTATKRR---YEEELGNLKGSLQELAGSDR-ELQDRLNSFKAHVFEQERKRAARLDDIQN 334
Query: 349 LKSQ 352
LKS+
Sbjct: 335 LKSE 338
>gi|123444623|ref|XP_001311080.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121892876|gb|EAX98150.1| hypothetical protein TVAG_332600 [Trichomonas vaginalis G3]
Length = 1292
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 321/1435 (22%), Positives = 602/1435 (41%), Gaps = 315/1435 (21%)
Query: 1 MALLDQLHIMGIRNF-PADK---NRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYP 56
M+ L L I GIR F P K + + F + LI G NG GKTTI E +++ALT
Sbjct: 1 MSKLISLTIKGIRLFNPEPKEEYKQTINFDNNIILITGPNGSGKTTIFESLQYALTG-LC 59
Query: 57 QGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVV 116
+ S+G F +D + +GKKD A +L+ + +V
Sbjct: 60 RKKSAGIGFFYDINV-------------------LGKKD-YMAECRLKFQAVDGKIYEIV 99
Query: 117 RSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
R +S K T+++ I + K QQ + L+G+ KAIL NVI
Sbjct: 100 RKTKISKSGKKSKLKTQESKILDEHQKEVYSKPDTVEQQ-----IPRLLGIPKAILENVI 154
Query: 177 FCHQENSSWPLD-EGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
FC Q + WP++ K +K FD IF + Y A+ IK + KE+ +++ + +
Sbjct: 155 FCQQTDQCWPIELNDKDLKLRFDTIFGSDNYESAIGQIKELKKNKDKELVQLQ---KEEI 211
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQL-------TEKERNMSV 288
NY K+ + K N + + E++ IE+ K I+ L +L EK+ +
Sbjct: 212 NYNKDYEQK----VKNEEDLLKKTREINEIEQEKKEIDVDLTRLHQIADNIEEKQGKIKD 267
Query: 289 MSTQYQTKKTERDMIQESCNELE----------SSIKQLFSGDKAELQSKLNLFKINLDE 338
+ K+ + +I+ES + E SS + L + ++ELQS N INL +
Sbjct: 268 LENVISQKEGQLKIIKESIDSFEMNHERVQMTISSCEDLKASLESELQS--NRETINLAK 325
Query: 339 KCSELE--NQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLA 396
E++ + ER+K + I E KL L+ E + +++
Sbjct: 326 SQIEMKKHDYERVKRE-----------ITERTQKLKDLKSKSENFNFEKTNFEKLISDFK 374
Query: 397 DTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVE 456
+ D + Y E E K + K DI+ LE F + + ++ E++ +
Sbjct: 375 NNYGTDD-YQEYYKKIESENSSKTE--NLKKLKRDIQNLENDFKNEQEKQREEVDEHNRQ 431
Query: 457 KVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSL 516
E+++++KS+ +Q+ NK + + N + ++Q L +L R + D++S +
Sbjct: 432 LTEVKTELKSYDEQL--NKLEDYSQEGYENLIKETQLAKDKLDAEL-RSDDSYDKISSKI 488
Query: 517 DPDQLKNEIEAW-IRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINL 575
+ +N+ + ++ E+ + ++++ SI I E K KN+KE K + IN
Sbjct: 489 NEINNENKNINKSLTEKKEI---IKKLESQRSI--NNQINDNEQKISKNKKEIK-SKINE 542
Query: 576 LKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNS 635
+KE L+ + I EENF + + S+ + N I+ + + ++ + + +
Sbjct: 543 IKE-------LIHEEIDEENFSKIIKEKQKSLNNEENSIRVETDKEKTKYEKSQIELDSK 595
Query: 636 SKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIG 695
K+L ++ +T ++ + LGS FE+E + E + Q+ +S+ T +Q ++ ++
Sbjct: 596 EKSLENKNKTKNDIESDLIENLGSTDFENEYKKYKNEQENLQKLISLDTKSQSIYEEFVS 655
Query: 696 KLEENEPRCPLCTRFFESDYSVPGLV-NKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQE 754
+ +CPLC R F+ + + N+L+ +K++P + + + + ++ ++ S++
Sbjct: 656 ESRSESCQCPLCKRKFKDNSERDEFIKNELEKVLKDLPSKIASNEEKLRKVSEKIESIEN 715
Query: 755 LKP---VYENIMKLQDTDIPSL----------------------------RSKLIELEEN 783
L+ +Y+ +++ DIP L RSK + E
Sbjct: 716 LRDKHFIYQQVLE----DIPKLEEEIDTLKSKRDQNFEEYQQIKQNYDEIRSKKEKFEHE 771
Query: 784 VIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
VI K ++++L + + +++ S L++++ L+ ++ E E K ++
Sbjct: 772 VIPKKNDVERLISYVSKYESENDNLRS------KLNKDLPNLSVIEEEKRILEDKSQNLQ 825
Query: 844 STGVDLDQVLAQQKEKK-----------NELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+ +L + L + ++K N+LN ++SK + N EK Q +K
Sbjct: 826 TEQANLMKKLTEASDRKSKLQSRYNEVNNKLNDYKSKFDDK----NKIKEKRQKRGIKKR 881
Query: 893 DIHSKQLTV--------QGGAGMLKSLEDRKCELE----------------------GMD 922
DI +K + + + A L+S++ EL+ +
Sbjct: 882 DIENKLIEIERINKEMNEANAQNLESIKKATNELQLDVDKLNNDFIKIKNDFEKISKSKE 941
Query: 923 SVYQTELEELGRKVAPIETQLNLAQSELDAL--------KKEHKKKLN--------EEGA 966
++ + ++E RK+ +E + + L L KK+ + N EE
Sbjct: 942 TISKYSVDETNRKIYELEKTIKENEDSLQQLDENLKKWEKKQEADQQNMDEIKIKLEENN 1001
Query: 967 KIQDYTKQLEEVKRIK-------LEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
+ DY +++++ K I+ E+ + L + +++ + +R ++
Sbjct: 1002 LVHDYLQKVQKYKEIEHEKEELLRELSGFANIDDLKNIDRIKQEILNKEKRSSELQGSYS 1061
Query: 1020 VCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTL 1079
++ + ++++ + N+ D NNLT + K A +E+ I DLTK+ L
Sbjct: 1062 HLDKELKDLSKILNNRYK---DTNNNLTEIRLKIAA---------TEMTIKDLTKFAEQL 1109
Query: 1080 ENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1139
N +++YH +K+ IN L++ +W + Y
Sbjct: 1110 NNSIMEYHQRKVLEINELLKAFWEKSY--------------------------------- 1136
Query: 1140 INRLIREYWTRIYQGNDIDYISIAADVGTGSEK----RRTYNYRVVQKKNGIEQDMRNRC 1195
Q DI+ ISI A T + + R +Y+Y+VV K+G E +M RC
Sbjct: 1137 -------------QSMDIENISIVAHSSTENNESKSGRISYDYKVVMFKSGQEVEMSGRC 1183
Query: 1196 SAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFS 1255
S GQ+VLA LIIR+ ALA+ F
Sbjct: 1184 SEGQKVLASLIIRM---------------------------------------ALAKAFG 1204
Query: 1256 RNCGIFALDEPTTNLDIKNASD------------QKNFQLIVITHDEEFIENLTA 1298
C I ALDEPTTNLD + S+ +N QL++ITH +F++ ++
Sbjct: 1205 --CSILALDEPTTNLDSDHMSNFAFLLSNDFKTMLENQQLLLITHSGDFVDKVST 1257
>gi|256072122|ref|XP_002572386.1| DNA repair protein RAD50 [Schistosoma mansoni]
gi|353231874|emb|CCD79229.1| putative dna repair protein RAD50 [Schistosoma mansoni]
Length = 1282
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 233/1008 (23%), Positives = 418/1008 (41%), Gaps = 233/1008 (23%)
Query: 403 TTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELES 462
T A +Y + +GL+ S+ L+++K+L ++ E Q +++ + E L+
Sbjct: 321 TDADVEYIMQFVDGLLHESENQ----LTEVKLLS---ANEERKAQTDVDLVRDELAALKQ 373
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
KI++ K+ + N+ ++ + ++ ++ + ++ + L+ + + L
Sbjct: 374 KIQTIKRNYNQQSCEKVNIEKRLENEHSLNERIEKVKDEFHKSEITVKDLNMDHELNNLH 433
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
I + ++ ELE + +ID +I+ Q E++ ++ + +KL I ++ RH
Sbjct: 434 QSITESLGKKKELEHSISLIDEKIATFQKSANKYRELELVQKERANKLEGIRKIRSRHAE 493
Query: 583 AFHLLFD--MIPEENFKNSL--------------DKALSSITFD--INRIQEDINAKEKH 624
A +F +IP + SL D+ I F +N +++ K
Sbjct: 494 ALEQIFSGSVIPFVATEKSLEEQANPNNIRSFINDQTRLRIVFSKRLNELEQSTRETRKQ 553
Query: 625 LYTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKRE----Q 677
L +E S+ T + + L E D+++++ G S P D+L++ + L+ +
Sbjct: 554 LAKIEQERSSLEATSKFNRNHLQEKRDQLKILEGKLLSVPGADDLEQTLINLQERRGSLE 613
Query: 678 EEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNN 737
EE + + +L+ + +L + CP+C R F+SD L+N++ +IK +P +
Sbjct: 614 EEYANEQGSVFLWRKFRDRLSRIDSDCPVCHRCFDSDAERDELLNEIDNRIKTLPSEFER 673
Query: 738 KKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTA 797
KK + + + SL EL+P+ I L + IP+L K+ + + + + + K
Sbjct: 674 KKQELKDIVSRLESLVELRPISLEIKNLHEEIIPALELKIKAELDKLTDVRSQRDKTSAL 733
Query: 798 LETPKTKEKTALSLQGDLTLLDQNIRE-------LNTLQRELER------------QESK 838
LET + E A ++QGDL +L++ E +N + E QE +
Sbjct: 734 LETYQADESLAKTVQGDLAILERLENESYELTVKINQFKYEFTDITTTDSQLIDVLQEER 793
Query: 839 ISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQ------------- 885
S +R T + L Q + Q++++ ++LN + + S RL KLQ
Sbjct: 794 KS-LRETLLTLSQTIDQKQKRVDQLNQAQREAVSEMHRLKDQLHKLQQENLDNVQLKNDL 852
Query: 886 --------SLQKQKNDIHSKQLTVQ----GGAGMLKSLEDRKCELEGMDSVYQTELEELG 933
+L+K+ +++ S+QL V A +S + CE + ++ T++ E+G
Sbjct: 853 SRLTRDCETLKKELSELESEQLPVVHRRWTKACSERSRIAKICE-QNIEQA-TTKVNEIG 910
Query: 934 RKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQL--------EEVKRIKLEI 985
K+ + + L++ E K + E +Q + E ++ +K ++
Sbjct: 911 EKLKKLNDACTSVEFALNSQPLERLKTILETAEGLQKNLSLVKSEADTCSENIELLKKQV 970
Query: 986 LNYTKR----GTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQ----SL 1037
+ R Q+ LR + L +R E + + +C+ I +Q + N+ +L
Sbjct: 971 NEHKMRQRELADCVQVRQLRCQLNFLTERTESLAKNQMICD-NIPLSDQDLINETKRLAL 1029
Query: 1038 EE-------IDLKNNLTLLEKKEAVAKLNEEL------------------KLSEIMISDL 1072
EE D+ N L+ L K + LN +L K SE+ SDL
Sbjct: 1030 EEEKLHSLKQDISNQLSELNAK--LCYLNRDLNEKYTNADNEYRDMMYQLKTSELACSDL 1087
Query: 1073 TKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKY 1132
+Y+ L+ ++ YH+ KM +N++IRE W
Sbjct: 1088 ERYYKALDRAIMSYHAVKMADLNKIIRELW------------------------------ 1117
Query: 1133 HSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK-----RRTYNYRVVQKK--- 1184
RS Y+GNDIDYI I ++ T + RRTYNYRVV K
Sbjct: 1118 -----RS-----------TYRGNDIDYIEICSEEDTAAASNVCRTRRTYNYRVVMVKTTP 1161
Query: 1185 -----------------NGIEQDMRNRCSAGQRVLACLIIRLFISD-------------- 1213
N DMR RCSAGQ+VLA LIIRL +++
Sbjct: 1162 GSMSVSRPKSKSYTSCSNEARLDMRGRCSAGQKVLASLIIRLALAEVFCLHCGVLALDEP 1221
Query: 1214 -------------------------QKNFQLIVITHDEEFIENLTAID 1236
QKNFQLIVITHDE+F+E L D
Sbjct: 1222 TTNLDRENIESLAYALVEIIKSRSRQKNFQLIVITHDEDFVELLGRSD 1269
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 130/218 (59%), Gaps = 27/218 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MAL++++ I+GIR+F + ++ + F P+TLI+G+NG GKTT+IEC+K++ T E P G+
Sbjct: 1 MALIERMSILGIRSFGQETSQKIEFFTPVTLILGQNGTGKTTVIECLKYSATGELPPGSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G +F+HDPRI ++ E A V LQ + V R+L+
Sbjct: 61 TGCSFIHDPRITQESEVKAK--------------------VTLQIRDVKGCPMVVSRALM 100
Query: 121 LS--NKNGKDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
+ +K + T D +I R+ + G +L C + EM +GVSKA+L NVI
Sbjct: 101 ATQRDKTKQGTLKTLDGSIKRQ-YPDGRVTSVSLRCTDLDQ--EMVTSLGVSKAVLENVI 157
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
FCHQE+S+WPL E K VK+ FD++F +++Y KAL++I+
Sbjct: 158 FCHQEDSNWPLQEAKSVKQRFDDLFASSRYVKALDAIR 195
>gi|12857523|dbj|BAB31030.1| unnamed protein product [Mus musculus]
Length = 214
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 132/216 (61%), Gaps = 25/216 (11%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S KN K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKNKKTEFKTLEGVITRMKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLR 193
>gi|344246902|gb|EGW03006.1| DNA repair protein RAD50 [Cricetulus griseus]
Length = 680
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 164/623 (26%), Positives = 312/623 (50%), Gaps = 111/623 (17%)
Query: 682 MMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKT 740
M+ +++ +I +L +EN+ CP+C R F+++ + +++ L++K++ P++ + ++
Sbjct: 1 MLGGATAVYSQFITQLTDENQSCCPVCQRVFQTETELQEVISDLQSKLRLAPDKLKSTES 60
Query: 741 HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALET 800
+ + +++ + L P+ ++I+ L++ +IP LR+KL + ++ K ++++ +T L T
Sbjct: 61 ELKKKERRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQSVNRDIQRLKTDIEEQETLLGT 120
Query: 801 PKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQ 856
+E++A D+T++++ EL ++R++ +Q +K+ GVDLD QV ++
Sbjct: 121 IMPEEESAKVCLTDVTIMERFQMELRDVERKIAQQAAKLQ-----GVDLDRTVQQVNQEK 175
Query: 857 KEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKC 916
+EK+++L+T SKIE + + E++Q L+ + N++ S++L + + +E++
Sbjct: 176 QEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQISTNLQRRQQMEEQTV 235
Query: 917 ELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGA--KIQDYTK 973
EL + S+Y+ E+++ ++ P+ET L Q E + L H+K+ + + A KI D +
Sbjct: 236 ELSTEVQSLYR-EIKDAKEQINPLETALEKFQQEKEELI--HRKQTSNKMAQDKINDIKE 292
Query: 974 QLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRK-EDIIAKRGVCERTINEINQSI 1032
+++ + +I NY + G ++ +K + + +++A+ C++ +IN+ +
Sbjct: 293 KVKNINGYMKDIENYIQDG--------KDDYKKQKETELNEVVAQLNECDKHKEKINKEM 344
Query: 1033 ANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMR 1092
++ID + + L L E KL E + D K +H+L K + +++
Sbjct: 345 GTMR-QDIDTQ-KVGLSAHGITTPFLYEHQKLEENI--DTIKRNHSLALGRQKGYEEEIL 400
Query: 1093 SINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRL 1143
+ +RE R + K E+MI DL Y+ TL+ KYH S+N
Sbjct: 401 HFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQ--DKYH-----SVN-- 451
Query: 1144 IREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQR 1200
+DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+
Sbjct: 452 ----------CDDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQK 501
Query: 1201 ------------VLACLIIRLFI------------------------------------- 1211
VLA LIIRL +
Sbjct: 502 AVAMSGLNGLLEVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIK 561
Query: 1212 --SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL+VITHDE+F+E L
Sbjct: 562 SRSQQRNFQLLVITHDEDFVELL 584
>gi|296412283|ref|XP_002835854.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629650|emb|CAZ80011.1| unnamed protein product [Tuber melanosporum]
Length = 1345
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 180/688 (26%), Positives = 316/688 (45%), Gaps = 108/688 (15%)
Query: 687 QYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLC 746
QY F + + L+E+ C LC R FES + T+++ + T N + I +L
Sbjct: 710 QY-FETAVKTLQEH-GSCVLCRRNFESALDRKNFQELVTTRLQSV--MTANTEDIIRELE 765
Query: 747 KQQRSLQELKPVYENIMKLQDTDIPSLRS---KLIELEENVIETKGELKKLKTALETPKT 803
+ + +++ P + + +L + ++P L + KL + +E ++E + +K T
Sbjct: 766 EDLKHIKDAAPSFGSWKRLTEIELPKLEADLQKLNQTKELLLEEYNQHEKNATE---KAH 822
Query: 804 KEKTALSLQGDLTLLDQNIRELNTLQRELE---RQESKISGMRS---TGVDLDQVLAQQK 857
K+ A SL+ + + + RE++ ++++E R ++ G R+ ++ ++ K
Sbjct: 823 KKFEAESLRAPVAEIAKYTREISNYEKQVEDASRLLQELGGSRTIEEMQSEMQRLNDGAK 882
Query: 858 EKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCE 917
K +N ++ E+ + + + +++ L+ + +++ K + ++K +E K E
Sbjct: 883 VIKRRINVLIAEKETARHSITLLDGQVRDLRMKFGELNFK---ISKAQDLVKRIESHKQE 939
Query: 918 LEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEE 977
++ T +EE+ +K+ + ++ A++++ ++ + K N + +
Sbjct: 940 A----VMHTTAIEEIDQKIRELAPKIQRAEAKVQMIQDDGAGKENRHQRDAMKLAESDMQ 995
Query: 978 VKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTIN--EINQSIANQ 1035
+KR + I NY RG QL R VQ L + A+ +N EI + A
Sbjct: 996 LKRTQHGIGNYLNRGGPEQLNRCRHQVQTLQVEVKKHEAEVTSIRVEVNNLEIEEGTATS 1055
Query: 1036 SLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH-----HTLENCVIKYHSQK 1090
+ E + NL + K + KLN E++ E +D ++ L + ++ S+K
Sbjct: 1056 T--ERSIHENLRFRKNKRDLEKLNVEIRELEGKNADAERHRFQRNAEVLSDKHMRLSSEK 1113
Query: 1091 ------MRS----INRLIREYWT------RIYQLKLSEIMIS-----DLTKYHHTLENCV 1129
MRS + +LI +Y T + Y+ L+++ + DL KY L+ V
Sbjct: 1114 SAKAGEMRSKDKQLEQLIADYQTDYADAKQKYKETLAKVQTTTGATNDLAKYGAALDKAV 1173
Query: 1130 IKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQ 1189
++YHS KM INR+I E W Y+G D+D I I +D ++ R+YNYRV K E
Sbjct: 1174 MRYHSLKMEEINRIIEELWKSTYRGTDVDTILIRSD-NENAKGNRSYNYRVCMVKQDAEM 1232
Query: 1190 DMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKA 1249
DMR RCSAGQ+VLA +IIRL A
Sbjct: 1233 DMRGRCSAGQKVLASIIIRL---------------------------------------A 1253
Query: 1250 LAETFSRNCGIFALDEPTTNLD--------------IKNASDQKNFQLIVITHDEEFIEN 1295
LAE F NCG+ ALDEPTTNLD I+ Q NFQLIVITHDE+F++
Sbjct: 1254 LAECFGINCGLIALDEPTTNLDSDNIRSLAKSLHEIIQTRQAQSNFQLIVITHDEDFLKE 1313
Query: 1296 LTAIDRA-YVVRIVRDHKGLSDIHLRSL 1322
+ D + R+ R+ + S I +S+
Sbjct: 1314 MQCQDYCDHYYRVSRNDRQKSIIERQSI 1341
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 152/294 (51%), Gaps = 44/294 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
++ +D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 41 LSRIDKLAILGVRSFDNTRSETIQFHAPLTLIVGYNGSGKTTIIECLKYATTGDLPPN-- 98
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKL ++ + RSL
Sbjct: 99 -------------------SKGGAFIHDPKMCGEKEVLAQVKLSFKSTSDAKMVCTRSLQ 139
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLG--CLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K T + + + G + + C + + V M +GVSKA+L VIFC
Sbjct: 140 LTVKKTTRQQKTLEGQLL--VVRNGERSTISSRCAELDQV--MPQYLGVSKAVLEYVIFC 195
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQ+ S WPL E +K+ FDEIF+A KY KA+++IKI R + +E+ +K + Y+
Sbjct: 196 HQDESLWPLSEPAVLKKRFDEIFEALKYTKAIDNIKILRKKQNEELGNLKILLE---QYR 252
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ 292
+ D ++ + +ELH+ ESM+ +++TE R +S + Q
Sbjct: 253 TDKD--------RGERAKRRSDELHDEIESMR------LEVTELSRQISEIVAQ 292
>gi|413922539|gb|AFW62471.1| hypothetical protein ZEAMMB73_226461 [Zea mays]
Length = 1304
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 159/305 (52%), Gaps = 24/305 (7%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F D V+ F +PLTLIVG NG GKTTIIEC+K + T E P
Sbjct: 1 MSTVDKMLIKGIRSFDPDNKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
++ SG FVHDP++ + ET +KL+ T D VC+ RS
Sbjct: 57 ----------------PNSRSGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCI-RSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKA+L NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLNYK 238
Q+ S+WPL + +K+ FD+IF AT+Y KALE I K+ +D++ +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQM-QEIKTFRLKLENLQTVK 218
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
+A ++ I + +K D S ++ ++E + +++Q+ + + Q K T
Sbjct: 219 DQAHKLRENIAQDQEKSDASKSQMEQLKEKICGTEREILQMETSLDELRRLQGQIDIKAT 278
Query: 299 ERDMI 303
ER +
Sbjct: 279 ERSTL 283
>gi|348687250|gb|EGZ27064.1| hypothetical protein PHYSODRAFT_293155 [Phytophthora sojae]
Length = 1369
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 248/989 (25%), Positives = 415/989 (41%), Gaps = 186/989 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I GIR+F ++ +V F PLT+++G+NGCGKTT+IEC+K A T P GA
Sbjct: 30 MSSIEKLSIRGIRSFSPNREEIVEFYHPLTVLLGDNGCGKTTVIECLKLACTGGLPPGAR 89
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG++ VHDP+I +E AS F + R GK + V RS
Sbjct: 90 SGQSLVHDPKIAGTNEVKASVRLRFRN--RAGK------------------AMVVQRSFQ 129
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+ D I R + G + +L E + +++GVSKAIL +VIFCHQ
Sbjct: 130 VRQTKKNLTFKALDGVI-RVVNELGEKVSLSHKCGELDQHIPDMLGVSKAILESVIFCHQ 188
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY--- 237
E S+WPL EG ++K+ FD IF++ +Y KALE+I+ +L+K + Y+ L+
Sbjct: 189 EESNWPLKEGAELKKRFDNIFESARYTKALEAIR----KLKKARLDNAKDYKRDLDVLTV 244
Query: 238 -KKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ ++ I +K ++ EE EE + L +L + + + + TQ Q +
Sbjct: 245 NMRTAEGIREKIELAQEKLREATEEGQEAEEKIAQAEVTLKELQQLQEEVRKLHTQLQRR 304
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDE---KCSELENQE-RLKSQ 352
+ + + ++S I+ + + ELQ LN + +++ L+ QE RL+
Sbjct: 305 QEDVVVKEQSVRSAYGKIENIMNDSDEELQGFLNDYDGIIEDHRRAFGALKAQEARLQ-- 362
Query: 353 YIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPE 412
+++ K ++ K ++E + T++K+ +AD + L ++Y
Sbjct: 363 -VEQNKSKEDYVALRASK-ARVETNIATYQKM----------VADLIDLAAKLGTKY--- 407
Query: 413 EGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINA-----------LIVEKVELE 461
+ + DI F + KQ E+N+ L E EL
Sbjct: 408 ------RFHLQPLSSQQDDISAFVAEFRNVVKDKQEEVNSLDAKQRQEDDKLTTELSELT 461
Query: 462 SKIKSFKQQIEGN----------KKDLTNVITQINEVN-QSQSTLQVLQTKLNRVNSEID 510
S++K + ++ K+ LT+ + ++ SQ + +++ ++
Sbjct: 462 SRVKQLRDELNSKTRSLETLNQEKRALTSRLRELGGAGVHSQREADEMSSQVTEAEKSLE 521
Query: 511 QLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKL 570
+ D LK+EI+ + RQ N++ D + + +I L+ +EI+ +N
Sbjct: 522 DYKQKNDVMALKSEIQGYNRQINDINDVIDALGQQIGQLRLYASKNSEIEFKRN------ 575
Query: 571 ADINLLKERHDRAFHLL-------FDMIPEENFKNSLDKALSSITFDINRIQEDINAKEK 623
+ LK +H+ AF F+ I E K + +L+S + RI I +++
Sbjct: 576 ---DYLK-KHE-AFQATLSEKVADFEEILEGGDKPTDRDSLASA---VGRIDSLIVERKR 627
Query: 624 HLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMM 683
T ++ + K L ME SK E ELD +L K+ + E M
Sbjct: 628 SCDTKRMELAAAEKRL-------------MENTTSSKLAEKELD--SLRQKKNELERQHM 672
Query: 684 TSTQYLF----------NSYIGKLEENEP----------------------------RC- 704
T + L N+ +G E + C
Sbjct: 673 TGLKALLEKVIPGEDLRNAELGVKEAEQAYADAKDKVVRRKNMVMFLNIYKKKGIKDHCC 732
Query: 705 PLCTR--------FFE---SDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ 753
PLC R FE SD + G V K +E+ T T I Q R
Sbjct: 733 PLCERDMTPEEEQAFEAILSDKTDDGKVADKIKKAEELERSTLETLTGIKQQMPSWRKWL 792
Query: 754 ELKPVYENIMKLQDTDIPSLRSKLIELEENVIETK----GELKKLKTALETPKTKEKTAL 809
EL +T IP K+ EL+E K G L K KTALE + K + A
Sbjct: 793 EL-----------ETTIP---QKVNELQEIYAAQKALENGVLDK-KTALELIQEKFEDAK 837
Query: 810 SLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSK 869
+ +L L + EL+ + R+E + G L V A++ K+ EL +
Sbjct: 838 VAKTELDSLRKTADELHMSDMTITREERMKASQGMGGRSLADVEAEKDAKQAELQELNRQ 897
Query: 870 IESGQTRLNSHNEKLQSLQKQKNDIHSKQ 898
++ Q L+ NE LQ LQ ND+H+++
Sbjct: 898 VQRKQRELDHTNEILQQLQ---NDLHNRR 923
>gi|398017937|ref|XP_003862155.1| RAD50 DNA repair-like protein [Leishmania donovani]
gi|322500384|emb|CBZ35461.1| RAD50 DNA repair-like protein [Leishmania donovani]
Length = 1360
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 177/706 (25%), Positives = 312/706 (44%), Gaps = 152/706 (21%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
C +C R F+S+ ++ + + K + PE + ++ + +SL++L+ V +
Sbjct: 696 CAVCERPFDSEDALESFLTRKADKQRASPEALAAVQAAVNTAQEAYQSLEKLQSVVVTVR 755
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK-----------------TKEK 806
+ + IP L ++L L + + + + E + + A + + T +
Sbjct: 756 QNRHR-IPVLEAELDALGDKMKQNRAEQRGVCAARDAAQHVVHQLDTMYQHLCMACTMGE 814
Query: 807 TALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV---------DLDQVLAQQK 857
++L+ L +++ Q+ E Q SG +T +L + A
Sbjct: 815 KTVALRDTLARKEKDFEAAQAEQQPHETQRKWGSGDGATARAEPPQRSYEELCEAYAAAT 874
Query: 858 EKKNELN---TFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDR 914
E+ ++LN T ++E GQ + N + LQ +K + ++ V L+ LE
Sbjct: 875 ERLHKLNRQFTEAQRMERGQ----AENAAERELQDRKTAMFQAEVAV----SKLEDLEAA 926
Query: 915 KCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQ 974
EL+ + ++T +EEL R+ A + + Q + L+ E +K E + KQ
Sbjct: 927 ARELQEEAAQHRTRVEELKRQAAEAQHSVEAHQQRVLQLRAELQKTDAAERGVLDTAEKQ 986
Query: 975 LEEVKRIKLEILNYTKRGTLTQLAALR------ESVQKLNQRKEDIIAKRGVCERTINEI 1028
L E++ +L+Y + G QL LR ES K ++E+ +A R + E
Sbjct: 987 LRELQLSLPPVLSYVQNGCARQLEELRVHLRETESAYKAAAQEEEGLASR------MKEA 1040
Query: 1029 NQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTK-------------- 1074
+++++Q ++ ++ +L+++ ++A L +E ++ L
Sbjct: 1041 RKTLSDQHRRSAEIDRHIDILQQEASIAADEAHLAETERTLASLKSDRLQDVEQLLGEEA 1100
Query: 1075 YHHTL----ENCVIKYHS-QKMRS------------INRLIRE------------YWTRI 1105
H +L E K S +K+R+ +N+L ++ Y +
Sbjct: 1101 RHASLATLRELITAKITSLEKIRAQQDGNTEAMLLDVNQLKQQLRGDKYQNIEKRYRSTF 1160
Query: 1106 YQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD 1165
+++ +EI I D+ KY+ LE V YH +K+ IN++I E W + Y+G+DID + I ++
Sbjct: 1161 LKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIAELWRQTYRGSDIDTVEIRSE 1220
Query: 1166 VGTGSE--KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVIT 1223
+ RR+YNYRVV K+ E DMR RCSAGQ+VLA +IIRL
Sbjct: 1221 TEGTTTTTARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLASIIIRL-------------- 1266
Query: 1224 HDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA---SDQ-- 1278
AL+E F +CGI ALDEPTTNLD NA +D
Sbjct: 1267 -------------------------ALSEAFCCDCGILALDEPTTNLDDDNARSLADALR 1301
Query: 1279 ---------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKG 1313
K+FQL+VITHDE+F+ L ++++ Y V +D +G
Sbjct: 1302 TLIQARRAVKHFQLVVITHDEQFVRALGGQSLEKFYYVH--KDREG 1345
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 162/320 (50%), Gaps = 51/320 (15%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M +++L + G+R+F PA++ ++FQ+PLT+I+G+NG GKTTIIE + A T P
Sbjct: 1 MTSIEKLQLCGVRSFDPNPANQQ-FIQFQKPLTVILGKNGAGKTTIIEALLNACTGTMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G + K +FV+DP++ + E A ++L T + + V+R
Sbjct: 60 GTGTEKG-------------------SFVYDPKVVGETEVKAQIRLIFTGKGGKLMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNV 175
S + + T D T++ + ATG + + + S ++ + ++GVS A+L +V
Sbjct: 101 SFQATRSAHRVTFTTLDNTVAFQDLATG--EVISSTYRSSDVDRVVPEMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE +WPL K VK IFD+IF AT+Y AL+ ++ R+++ E +A A
Sbjct: 159 IFCHQEECNWPLGPPKDVKRIFDDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALR 218
Query: 236 NYKKEAD------SKKQLIYNNTQKRD-----------QSFEELHNIEESMKPI------ 272
++++A ++K+ + Q R Q+ EEL +EE ++ +
Sbjct: 219 EHREQAKQLEQQIAQKESVVKAIQGRSIGIEPELRGLRQAREELRTVEEQIETLQREVAV 278
Query: 273 -NEKLVQLTEKERNMSVMST 291
N +L + E R M V +T
Sbjct: 279 TNGRLEERREAVRRMGVPAT 298
>gi|413922540|gb|AFW62472.1| hypothetical protein ZEAMMB73_226461 [Zea mays]
Length = 1316
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 159/305 (52%), Gaps = 24/305 (7%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F D V+ F +PLTLIVG NG GKTTIIEC+K + T E P
Sbjct: 1 MSTVDKMLIKGIRSFDPDNKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
++ SG FVHDP++ + ET +KL+ T D VC+ RS
Sbjct: 57 ----------------PNSRSGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCI-RSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKA+L NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLNYK 238
Q+ S+WPL + +K+ FD+IF AT+Y KALE I K+ +D++ +EI + + K
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQM-QEIKTFRLKLENLQTVK 218
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
+A ++ I + +K D S ++ ++E + +++Q+ + + Q K T
Sbjct: 219 DQAHKLRENIAQDQEKSDASKSQMEQLKEKICGTEREILQMETSLDELRRLQGQIDIKAT 278
Query: 299 ERDMI 303
ER +
Sbjct: 279 ERSTL 283
>gi|146091672|ref|XP_001470089.1| RAD50 DNA repair-like protein [Leishmania infantum JPCM5]
gi|134084883|emb|CAM69281.1| RAD50 DNA repair-like protein [Leishmania infantum JPCM5]
Length = 1360
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 177/706 (25%), Positives = 312/706 (44%), Gaps = 152/706 (21%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
C +C R F+S+ ++ + + K + PE + ++ + +SL++L+ V +
Sbjct: 696 CAVCERPFDSEDALESFLTRKADKQRASPEALAAVQAAVNTAQEAYQSLEKLQSVVVTVR 755
Query: 764 KLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK-----------------TKEK 806
+ + IP L ++L L + + + + E + + A + + T +
Sbjct: 756 QNRHR-IPVLEAELDALGDKMKQNRAEQRGVCAARDAAQHVVHQLDTMYQHLCMACTMGE 814
Query: 807 TALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV---------DLDQVLAQQK 857
++L+ L +++ Q+ E Q SG +T +L + A
Sbjct: 815 KTVALRDTLARKEKDFEAAQAEQQPHETQRKWGSGDGATARAEPPQRSYEELCEAYAAAT 874
Query: 858 EKKNELN---TFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDR 914
E+ ++LN T ++E GQ + N + LQ +K + ++ V L+ LE
Sbjct: 875 ERLHKLNRQFTEAQRMERGQ----AENAAERELQDRKTAMFQAEVAV----SKLEDLEAA 926
Query: 915 KCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQ 974
EL+ + ++T +EEL R+ A + + Q + L+ E +K E + KQ
Sbjct: 927 ARELQEEAAQHRTRVEELKRQAAEAQHSVEAHQQRVLQLRAELQKTDAAERGVLDTAEKQ 986
Query: 975 LEEVKRIKLEILNYTKRGTLTQLAALR------ESVQKLNQRKEDIIAKRGVCERTINEI 1028
L E++ +L+Y + G QL LR ES K ++E+ +A R + E
Sbjct: 987 LRELQLSLPPVLSYVQNGCARQLEELRVHLRETESAYKAAAQEEEGLASR------MKEA 1040
Query: 1029 NQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTK-------------- 1074
+++++Q ++ ++ +L+++ ++A L +E ++ L
Sbjct: 1041 RKTLSDQHRRSAEIDRHIDILQQEASIAADEAHLAETERTLASLKSDRLQDVEQLLGEEA 1100
Query: 1075 YHHTL----ENCVIKYHS-QKMRS------------INRLIRE------------YWTRI 1105
H +L E K S +K+R+ +N+L ++ Y +
Sbjct: 1101 RHASLATLRELITAKITSLEKIRAQQDGNTEAMLLDVNQLKQQLRGDKYQNIEKRYRSTF 1160
Query: 1106 YQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD 1165
+++ +EI I D+ KY+ LE V YH +K+ IN++I E W + Y+G+DID + I ++
Sbjct: 1161 LKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIAELWRQTYRGSDIDTVEIRSE 1220
Query: 1166 VGTGSE--KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVIT 1223
+ RR+YNYRVV K+ E DMR RCSAGQ+VLA +IIRL
Sbjct: 1221 TEGTTTTTARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLASIIIRL-------------- 1266
Query: 1224 HDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA---SDQ-- 1278
AL+E F +CGI ALDEPTTNLD NA +D
Sbjct: 1267 -------------------------ALSEAFCCDCGILALDEPTTNLDDDNARSLADALR 1301
Query: 1279 ---------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKG 1313
K+FQL+VITHDE+F+ L ++++ Y V +D +G
Sbjct: 1302 TLIQARRAVKHFQLVVITHDEQFVRALGGQSLEKFYYVH--KDREG 1345
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 51/320 (15%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M +++L + G+R+F PA++ ++FQ+PLT+I+G+NG GKTTIIE + A T P
Sbjct: 1 MTSIEKLQLCGVRSFDPNPANQQ-FIQFQKPLTVILGKNGAGKTTIIEALLNACTGTMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G + K +FV+DP++ + E A ++L T + + V+R
Sbjct: 60 GTGTEKG-------------------SFVYDPKVVGETEVKAQIRLIFTGKGGKLMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNV 175
S + + T D T++ + ATG + + + S ++ + ++GVS A+L +V
Sbjct: 101 SFQATRSAHRVTFTTLDNTVAFQDLATG--EVISSTYRSSDVDRVVPEMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE S+WPL K VK IFD+IF AT+Y AL+ ++ R+++ E +A A
Sbjct: 159 IFCHQEESNWPLGPPKDVKRIFDDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALR 218
Query: 236 NYKKEAD------SKKQLIYNNTQKRD-----------QSFEELHNIEESMKPI------ 272
++++A ++K+ + Q R Q+ EEL +EE ++ +
Sbjct: 219 EHREQAKQLEQQIAQKESVVKAIQGRSIGIEPELRGLRQAREELRTVEEQIETLQREVAV 278
Query: 273 -NEKLVQLTEKERNMSVMST 291
N +L + E R M V +T
Sbjct: 279 TNGRLEERREAVRRMGVPAT 298
>gi|340370826|ref|XP_003383947.1| PREDICTED: DNA repair protein RAD50-like [Amphimedon queenslandica]
Length = 818
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 143/245 (58%), Gaps = 30/245 (12%)
Query: 1 MALLDQLHIMGIRNF-PADKNRV-VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ +D+L I GIR+F P ++ V VRF+ P+TLIVG+NG GKTTIIEC+K+ T E+P
Sbjct: 1 MSTIDRLSIRGIRSFGPRQEDEVIVRFRSPVTLIVGQNGAGKTTIIECLKYMTTGEFPPN 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
S G NFV DP++ + E A+++L+ + + R
Sbjct: 61 ---------------------SKGGNFVMDPKLAGEREVKAVIRLKFVNVKGEKITCSRI 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
+ K K + ++ R+ TG ++ + C++ + + CNL GVSKAILN+VI
Sbjct: 100 IQSEQKLKKIEQKQLEGSLVREDKVTGEKIKVSARCIEINTEM-ACNL-GVSKAILNHVI 157
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATL 235
FCHQE+S+WPL EGK +K FDEIF +T+Y+KALE+I K Q+D ++++ E+ Y
Sbjct: 158 FCHQEDSNWPLSEGKALKTKFDEIFASTRYSKALENIKKFQKD--QEKLAELSRKYDKVA 215
Query: 236 NYKKE 240
+KE
Sbjct: 216 QIEKE 220
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKI-KEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENI 762
CPLC R +++ + L+ ++ ++ ++PE N + + QL L +L P
Sbjct: 592 CPLCARGYDTQEGIDSLITSIERRLTSKVPELIQNYQQQMTQLRSVHTKLLQLAPQLAQA 651
Query: 763 MKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNI 822
LQ +IPSL ++ E+ + + + K ++ L + + L+ T L Q
Sbjct: 652 QVLQTDEIPSLEKQVKEMNSTLYKLNQDTTKAESELSASQKQLDQLRELRPRATRLTQLR 711
Query: 823 RELNTLQRELERQESKISG--MRSTGV 847
+L++L R + + SK+ G +RS V
Sbjct: 712 TDLDSLDRRISAELSKVGGESVRSHAV 738
>gi|426195737|gb|EKV45666.1| hypothetical protein AGABI2DRAFT_206829, partial [Agaricus bisporus
var. bisporus H97]
Length = 492
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 125/223 (56%), Gaps = 24/223 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I GIR+F + +V F P+T+IVG NG GKTTIIEC+K+A T + P G
Sbjct: 1 MAHLDKLAIRGIRSFDDKQIAIVEFFSPVTVIVGHNGSGKTTIIECLKYATTGDQPPGTR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKL+ N + VR+L
Sbjct: 61 GGA---------------------FIHDPKMANEKEVKAQVKLRFYAANGIRMLAVRNLS 99
Query: 121 LSNKNGKDNCATRDTTISRKIFA--TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K T + +S + TG + + E E+ L+GVSKA+L+NVIFC
Sbjct: 100 LTAKKTTMTMKTLEGILSLADESEKTGKRSTISTKCAEMDNEIPQLLGVSKAVLDNVIFC 159
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRL 220
HQE S WP E +K+ FDEIF+AT+Y KAL+SIK +++DR+
Sbjct: 160 HQEESYWPFSEPSNLKKKFDEIFEATRYAKALDSIKTLRKDRI 202
>gi|336369555|gb|EGN97896.1| hypothetical protein SERLA73DRAFT_182676 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382329|gb|EGO23479.1| hypothetical protein SERLADRAFT_469443 [Serpula lacrymans var.
lacrymans S7.9]
Length = 450
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 121/229 (52%), Gaps = 55/229 (24%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
++Y ++ ++K+S++ +DL KY L+N ++KYHS KM +N +R W + YQG DID
Sbjct: 251 KQYTNQLVKVKMSDMANNDLEKYAKALDNAIMKYHSLKMEEVNDTMRHLWNKTYQGTDID 310
Query: 1159 YISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
I I +DV G+ KR +YNYRVV K+ +E DMR RCSAGQ++LA +IIRL
Sbjct: 311 GIKIRSDVEGGASKR-SYNYRVVMTKDQVEMDMRGRCSAGQKMLASIIIRL--------- 360
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNAS-- 1276
AL+++F +NCGI ALDEPT LD +N
Sbjct: 361 ------------------------------ALSDSFGQNCGILALDEPTNALDTENIDAL 390
Query: 1277 ------------DQKNFQLIVITHDEEFIENLTAID-RAYVVRIVRDHK 1312
+ NFQLIVITHDE F+ L D Y R+ RD +
Sbjct: 391 AASLVDIINERKNHANFQLIVITHDENFLRKLGQSDVMEYYWRVSRDSR 439
>gi|397569691|gb|EJK46906.1| hypothetical protein THAOC_34410 [Thalassiosira oceanica]
Length = 1372
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 138/267 (51%), Gaps = 50/267 (18%)
Query: 1 MALLDQLHIMGIRNF-PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
MA +++L + G+R F P D+ +V+ F PLT+IVG NGCGKTTIIE +K+A+T P G
Sbjct: 1 MASINKLSVRGVRAFSPNDEEQVISFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPGN 60
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
SG++FVHDPR + + AS +KL+ T N ++ V RS+
Sbjct: 61 KSGQSFVHDPRAMGQSSSKAS--------------------IKLRITGMNGMSMVVARSM 100
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
++ K + D TI R + A G + E + +GVSK IL +V+FCH
Sbjct: 101 EVTQKKTNASFKALDGTI-RTVDADGNRVTQSHKTGEMDKSVPTYLGVSKPILEHVVFCH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIF---------------------DATKYNKALESI----- 213
QE++SWPL EG +K+ FD+IF D+TKY KALE+I
Sbjct: 160 QEDASWPLQEGAVLKKRFDDIFGELARRVVQVVELNSRCHVPSDSTKYAKALEAIKKEKK 219
Query: 214 --KIQRDRLRKEIPEIKAHYQATLNYK 238
K Q L+ E+ +K+H A Y+
Sbjct: 220 EYKAQEKDLKAELEGLKSHKHAARGYR 246
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 98/191 (51%), Gaps = 53/191 (27%)
Query: 1117 DLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTY 1176
DL +Y+ L+ +++YH K+ IN++IRE W Y+G DI I I + + S R+Y
Sbjct: 1177 DLDRYYEALDKALLRYHGIKIADINKIIRELWALTYKGEDITNIEIQSGQDSSSRANRSY 1236
Query: 1177 NYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID 1236
NYR+V K + DMR RCSAGQRVLA ++IRL
Sbjct: 1237 NYRIVMSKGNSQMDMRGRCSAGQRVLASIVIRL--------------------------- 1269
Query: 1237 RAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA--------------SDQKNFQ 1282
ALAETF NCG+ ALDEPTTNLD +N + Q NFQ
Sbjct: 1270 ------------ALAETFCLNCGVMALDEPTTNLDFENKRGLAIALAQIIASRASQSNFQ 1317
Query: 1283 LIVITHDEEFI 1293
L+VITHDE+F+
Sbjct: 1318 LVVITHDEDFV 1328
>gi|156393372|ref|XP_001636302.1| predicted protein [Nematostella vectensis]
gi|156223404|gb|EDO44239.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 120/227 (52%), Gaps = 57/227 (25%)
Query: 1104 RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIA 1163
++ +K +++ DL KY+ L ++KYHS KM IN++I+EYW Y+GNDID I I
Sbjct: 32 KVIDMKTTKMASGDLEKYYKALNRAIMKYHSIKMAEINKIIKEYWINTYKGNDIDTIEIR 91
Query: 1164 ADV--GTGSEK-RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLI 1220
++ G+G+ K RRTYNYRVV K + DMR RCSAGQ+VLA LIIRL
Sbjct: 92 SEDEDGSGASKARRTYNYRVVMIKGDLALDMRGRCSAGQKVLASLIIRL----------- 140
Query: 1221 VITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------- 1271
ALAETF NCGI LDEPTTNLD
Sbjct: 141 ----------------------------ALAETFCLNCGILTLDEPTTNLDEENIESLAN 172
Query: 1272 -----IKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1312
I+ Q+NFQLIVITHDE F+E L D + RI ++ K
Sbjct: 173 QLANVIRTRQAQRNFQLIVITHDENFVELLGRADFVDFYYRISKNDK 219
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 103/231 (44%), Gaps = 89/231 (38%)
Query: 1061 ELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTK 1120
++K +++ DL KY+ L ++KYHS KM IN++I+EYW
Sbjct: 35 DMKTTKMASGDLEKYYKALNRAIMKYHSIKMAEINKIIKEYW------------------ 76
Query: 1121 YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAA--DVGTGSEK-RRTYN 1177
IN Y+GNDID I I + + G+G+ K RRTYN
Sbjct: 77 -------------------IN---------TYKGNDIDTIEIRSEDEDGSGASKARRTYN 108
Query: 1178 YRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------------ 1213
YRVV K + DMR RCSAGQ+VLA LIIRL +++
Sbjct: 109 YRVVMIKGDLALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILTLDEPTTNLDEENIE 168
Query: 1214 ---------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q+NFQLIVITHDE F+E L D + RI ++ K
Sbjct: 169 SLANQLANVIRTRQAQRNFQLIVITHDENFVELLGRADFVDFYYRISKNDK 219
>gi|302762188|ref|XP_002964516.1| ATP-binding cassette transporter, subfamily I, member 4, SmABCI4
[Selaginella moellendorffii]
gi|300168245|gb|EFJ34849.1| ATP-binding cassette transporter, subfamily I, member 4, SmABCI4
[Selaginella moellendorffii]
Length = 1160
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ LD++ I GIR+F D V+ F RPLTL+VG NG GKTTIIEC+K A T E P A
Sbjct: 1 MSTLDKMLIKGIRSFGPDNTHVITFYRPLTLVVGANGAGKTTIIECLKNACTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG++F+HDP++ G+ ET +KL+ T D VC +RS
Sbjct: 61 SGQSFIHDPKV---------DGQT-----------ETKGQIKLRFRTASGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINTHTGEKVCLSYRCADMDREVPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ ++WPL E +K+ FD+IF AT+Y KAL+ IK
Sbjct: 160 QDEANWPLSEASVLKKKFDDIFSATRYTKALDVIK 194
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 294/617 (47%), Gaps = 70/617 (11%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
CP C R F + V+K + K ++ + + + + L +L+P++E
Sbjct: 557 CPCCERPFATPEEEDEFVDKQRVKRSSTAQRLHELASLTSIADNKFQQLDKLRPLFEEYQ 616
Query: 764 KLQDTDIP----SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLD 819
KL+ I S+ +ELE + ET+ ++ L + K L L +L +
Sbjct: 617 KLESQGISATEKSISDMTMELERST-ETQNDVSCLLA-------QSKAELGLVTELRITA 668
Query: 820 QNIRELNT----LQRE---LERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIES 872
Q+I E T L+RE LE Q + S +RS D+ + L + +++ ELN K++
Sbjct: 669 QSIEEAYTSVQNLEREVRTLENQLNPESSLRSPD-DVGEELEKHEKQLEELN---RKLDR 724
Query: 873 GQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCEL----EGMDSVYQTE 928
+ + + L + +++K+ K+ ++ K+L++ + L +D+ Q E
Sbjct: 725 LKEEHDYMKDDLANCKQRKHAEEMKKADLEKKLERNKALKEEEASLVKQMNQIDTEIQFE 784
Query: 929 LEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY 988
+E+L P+ + E D LK++ +++ + + D+ K++ + I +I +Y
Sbjct: 785 MEQL----EPLAEEKERHLKEFDQLKRKFRQEQDVSTQGVNDFDKEVHSLTNIWGKIKDY 840
Query: 989 TKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN--- 1045
+R + + + +L +K++ +K+ C + +N +A Q + E ++ +N
Sbjct: 841 VERHKTHNVQTAKRRLSELQAQKDEEESKKSFCLAEVQRVNNVLAQQKVIERNIADNIKY 900
Query: 1046 ---LTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTL----ENCVIKYHSQKMRSINRLI 1098
L + + +L + LK + ++ + + + T+ N K +
Sbjct: 901 QRMLAIGNTLDFEGELKKALKEKQHLMGEESHHKGTIAVHESNIARNKTDLKQPQYKNID 960
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ Y ++ QLK E+ DL KY++ L+ ++++H+ KM IN++I+E W + Y+G DID
Sbjct: 961 KRYRAQLIQLKTMEMANKDLDKYYNALDRALMRFHTMKMEEINKIIKELWQQTYRGQDID 1020
Query: 1159 YISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
+I I AD GTG+ R+Y+YRVV + G E +MR RCSAGQ+VLA LIIRL +++
Sbjct: 1021 FIEIRADAEGTGT---RSYSYRVVMRAGGAELEMRGRCSAGQKVLAALIIRLALAETFCL 1077
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
++T DE NL A + AE+F+ + + E
Sbjct: 1078 NCGILTLDEP-TTNLDAQN--------------AESFA--AALLRIMEERRG-------- 1112
Query: 1278 QKNFQLIVITHDEEFIE 1294
Q+NFQLIVITHDE F +
Sbjct: 1113 QENFQLIVITHDERFAQ 1129
>gi|303273074|ref|XP_003055898.1| Rad50 DNA repair/recombination protein [Micromonas pusilla
CCMP1545]
gi|226461982|gb|EEH59274.1| Rad50 DNA repair/recombination protein [Micromonas pusilla
CCMP1545]
Length = 1542
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 178/362 (49%), Gaps = 49/362 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +D+L I GIR+F + + + F +PLTLIVG NG GKTT+IEC+K A T E P A
Sbjct: 1 MCSVDKLLIKGIRSFSPENDHAIVFPKPLTLIVGRNGAGKTTVIECLKMATTGELPPSAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G+ F+HDP++ E A +KL+ V RS
Sbjct: 61 AGQAFIHDPKVADVTEVKAQ--------------------IKLRFRDVRKQPCVVTRSFQ 100
Query: 121 LSNKNG-----KDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILN 173
L+ K+G KD D I TG V + C + + +++GVSKAIL
Sbjct: 101 LTQKSGGKLEKKDL----DQVIQTLDEKTGEKVSVSRKCADINATVP--DMMGVSKAILE 154
Query: 174 NVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKE----IPEIKA 229
NV+F HQE+S+WPL E +K+ FDEIF ATKY KALE I ++LRKE I E K
Sbjct: 155 NVVFVHQEDSNWPLGEAATLKKKFDEIFSATKYTKALEHI----NKLRKEQSATIKEYKL 210
Query: 230 HYQATLNYKKEADSK-KQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSV 288
+ TL + + +K KQ + N K + E + ++E + NE L + ++S+
Sbjct: 211 KVE-TLRVQCDHATKLKQRLDENAGKATRLGERMRTLQEKIDRANE---ALKARHDDLSL 266
Query: 289 MSTQYQTK---KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELEN 345
+ + K + +RD++ C +S+K + LQS + F E +ELE
Sbjct: 267 IRKIAEKKALLEAKRDVVVAECARRGASLKNELTDTLENLQSHRDAFGAKTAELRAELER 326
Query: 346 QE 347
+
Sbjct: 327 HD 328
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 43/215 (20%)
Query: 1072 LTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIK 1131
+T + ++ C + + + + + + + ++ + +LK E + DL +YH L+ ++
Sbjct: 1317 VTTHQEAIDACKKELNDPQYKGVRKRLSKH---VVELKTYEYVSQDLERYHSALDRALMA 1373
Query: 1132 YHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDM 1191
+H+ KM IN++++E W R Y+G DID+I I +D TG++ R +YNYRVV E +M
Sbjct: 1374 FHASKMSDINKVVKELWQRTYRGQDIDFIQIRSDDDTGNKGRSSYNYRVVMIVGDAELEM 1433
Query: 1192 RNRCSAGQRVLACLIIRLFIS--------------------------------------- 1212
R RCSAGQ+VLACLIIRL ++
Sbjct: 1434 RGRCSAGQKVLACLIIRLALAETFCLNCGILALDEPTTNLDAPNADALARSLIDIMRSRE 1493
Query: 1213 DQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
DQ+NFQLIVITHD F + L + A Y RI +D
Sbjct: 1494 DQENFQLIVITHDMHFAQVLGQREHADYYWRITKD 1528
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 8/176 (4%)
Query: 673 LKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIP 732
L + +E+++++ + +F S+ CPLC+ FE + +++K+ IP
Sbjct: 803 LSKAEEDLTVLKNLAKVFQSFSAAAGSTSC-CPLCSAKFEDARKLETFRAMIESKVASIP 861
Query: 733 EQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELK 792
EQT + + ++ +++ LQ L P+ ++ T +P R L + K
Sbjct: 862 EQTASGRAAVEASRERRAKLQALAPLVSAYERVTRTALPDARRALSDATAADAVAKRAAS 921
Query: 793 KLKTALETPKTKEKTALSLQGD---LTLLDQNIRELNTLQRELERQESKISGMRST 845
A+ET + +A++L D + L + REL + LER SG+ S+
Sbjct: 922 DASNAMETARESHTSAVALAEDADTIARLSREARELRGVVESLER----ASGVASS 973
>gi|357149065|ref|XP_003574988.1| PREDICTED: DNA repair protein RAD50-like [Brachypodium distachyon]
Length = 1316
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 115/211 (54%), Gaps = 57/211 (27%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ Y+ ++ QLK +E+ DL +Y+ L+ ++++H+ KM IN++I+E W + Y+G DID
Sbjct: 1117 KRYFNQLLQLKTTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDID 1176
Query: 1159 YISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
ISI +D G G+ R+Y+YRVV + G E +MR RCSAGQ+VLA LIIRL
Sbjct: 1177 CISINSDSEGAGT---RSYSYRVVMQNGGAELEMRGRCSAGQKVLASLIIRL-------- 1225
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
ALAETF NCGI ALDEPTTNLD NA
Sbjct: 1226 -------------------------------ALAETFCLNCGILALDEPTTNLDGPNAES 1254
Query: 1278 --------------QKNFQLIVITHDEEFIE 1294
Q+NFQLI+ITHDE F +
Sbjct: 1255 LAAALLRIMESRKGQENFQLIIITHDERFAQ 1285
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 120/215 (55%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFGPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
>gi|402218631|gb|EJT98707.1| hypothetical protein DACRYDRAFT_101755 [Dacryopinax sp. DJM-731
SS1]
Length = 1564
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 120/221 (54%), Gaps = 22/221 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA LD+L I GIR+F ++ F P+T+IVG NG GKTTIIEC+K+ T + P
Sbjct: 262 MAFLDKLAIRGIRSFDDKSVAIIEFYSPVTVIVGHNGSGKTTIIECLKYITTGDQPPNTR 321
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FVHDP++ + E A V+L+ N + R+L
Sbjct: 322 GGA---------------------FVHDPKMANEKEVKAQVRLRFYAANGTRMLATRNLS 360
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
++ K T + + A G + + E +E+ L+GVSK++L NVIFCHQ
Sbjct: 361 VTQKKTGLTMKTLEGILGTADEARGKRSTISTKCAEMDIEIPRLLGVSKSVLENVIFCHQ 420
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDRL 220
E S WPL E +K+ FD+IF+ATKY KAL+SIK +++DR+
Sbjct: 421 EESYWPLAEPAALKKKFDDIFEATKYTKALDSIKSLRKDRV 461
>gi|18402837|ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]
gi|57013013|sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50
gi|7110148|gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana]
gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair protein [Arabidopsis thaliana]
gi|22654997|gb|AAM98090.1| At2g31970/F22D22.28 [Arabidopsis thaliana]
gi|29028758|gb|AAO64758.1| At2g31970/F22D22.28 [Arabidopsis thaliana]
gi|330253520|gb|AEC08614.1| DNA repair protein RAD50 [Arabidopsis thaliana]
Length = 1316
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 122/215 (56%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + VV F RPLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F+HDP++ +G+ ET A +KL+ T D VC +RS
Sbjct: 61 SGHSFIHDPKV---------AGET-----------ETKAQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 57/209 (27%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ ++ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W + Y+G D+D
Sbjct: 1117 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMD 1176
Query: 1159 YISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
YI I +D G G+ R+Y+Y+V+ + E +MR RCSAGQ+VLA LIIRL
Sbjct: 1177 YIRIHSDSEGAGT---RSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRL-------- 1225
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
ALAETF NCGI ALDEPTTNLD N+
Sbjct: 1226 -------------------------------ALAETFCLNCGILALDEPTTNLDGPNSES 1254
Query: 1278 --------------QKNFQLIVITHDEEF 1292
Q+NFQLIVITHDE F
Sbjct: 1255 LAGALLRIMEDRKGQENFQLIVITHDERF 1283
>gi|320168353|gb|EFW45252.1| zinc ion binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1396
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 238/501 (47%), Gaps = 62/501 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I GIR+F ++ +RFQ PLT+IVG NG GKTTIIEC+++ T E P +
Sbjct: 1 MSTIERLSIQGIRSFSSNDACDIRFQTPLTVIVGHNGAGKTTIIECLRYVTTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG +FV DP++ K+ E A VKL+ T + ++ R L
Sbjct: 61 SGVSFVLDPKLAKEREVKAQ--------------------VKLRFTNVSGKSMVCSRRLQ 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLG--CLQQESVLEMCNLIGVSKAILNNVIFC 178
++ K +C T ++T+ TG ++++ C + ++ + +GVSKA+L NVIFC
Sbjct: 101 VTQTAKKASCKTIESTLLTIDPVTGEKQSISSKCADMDRLIPI--ELGVSKAVLENVIFC 158
Query: 179 HQEN-----------SSW---PLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEI 224
HQE +SW PL E KK+KE FD+IF AT+Y KALE+IK RD K++
Sbjct: 159 HQEEQNAFGIFSHSMNSWLFRPLSEPKKLKEKFDDIFAATRYIKALENIKKFRDEQVKDV 218
Query: 225 PEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKER 284
E + + A K++L + + + E + I+ ++PIN+ + L +
Sbjct: 219 REKVIELEHLEKCRDAAQEKRRLQQSVRAQMQAADEAITGIDAKLEPINKLIAGLDTQMA 278
Query: 285 NMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELE 344
+ + ++ +D + ++ E++ + + AEL F DE+ +
Sbjct: 279 KFNALQQDRAAAESAKDQLVKNLAEIKGGMTNELTETDAELAQMEKRF----DEQFRQAA 334
Query: 345 NQERLKSQYIQEEKQSHTHINEAQMKLGKL----ERDEETHKKLNDTLKTKLNNLADTLC 400
Q R + Q++KQ++ + + + +L R E L++ +K + + L TL
Sbjct: 335 AQRR---EAEQQQKQANDALEALRAEFNRLLTQGGRAESELDALSNRVKER-DALIQTLA 390
Query: 401 LDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVEL 460
TPEE L + + + + LER S ++A I A ++ L
Sbjct: 391 NKYRIDGYRTPEE---LAAKPRDAVGQEFR--RQLERVLS----ARRATIEA---DRARL 438
Query: 461 ESKIKSFKQQIEGNKKDLTNV 481
E ++ ++ + DL+ V
Sbjct: 439 EGEVAKLGSDVDARRNDLSIV 459
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 162/653 (24%), Positives = 271/653 (41%), Gaps = 113/653 (17%)
Query: 680 VSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDY----------------SVPGLVNK 723
++ + + + +++S+I K E++ CPLC R F +
Sbjct: 726 LATLDAAELMYSSFIKKAEQSHA-CPLCERAFGHGGHAAAASSSSSSRSSLDEFDKFMQT 784
Query: 724 LKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEEN 783
K K+ IP + N T +++L + L L+P+ + +L + +P L S IE
Sbjct: 785 YKNKLSVIPGRKANLATQLNELQALLQRLDTLRPLSTQLTELVEKTLPRLESS-IEDAAA 843
Query: 784 VIETKGE-LKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGM 842
V E G + L ++ K A L+ D L + ++ L E+ QE +
Sbjct: 844 VCEVLGANVDDLAASVAEQKESVDLANQLRADAAALARLSSDVRALDNEIAAQERTLQST 903
Query: 843 RSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQ 902
+G DQV ++K EL R + S TR K ++ ++N + T+
Sbjct: 904 GGSGRSRDQVSEERKSLAAELEMLRRSV-SQLTR--DIRAKEDAVNAERNRLFEVTKTLA 960
Query: 903 GGAGMLKSLEDRKC---ELEGMDSVYQTELEELGRKVAPIE----TQLNLAQSELDALKK 955
L+ + R EL V ELE + + P E T L+ ++ +ALK
Sbjct: 961 SRVSQLEEAKRRFSVHEELVAAARVLGEELETIQLQHKPAEERLRTALDARETSENALKS 1020
Query: 956 EHKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKED 1013
+ + +E + D K LE ++ K + +LAA + + KE
Sbjct: 1021 ANVRWRDETATLTRDSDAFKTLEAAS-----MMLAGKEAEVARLAASKAHASRSMADKEQ 1075
Query: 1014 IIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL-----KLSEIM 1068
+ + + I + + + +L++N++ KK V + +EE+ +L ++
Sbjct: 1076 QVT---TLQEKVASIRRQVDREQSVRRNLQDNISFRRKKIEVQQCDEEMANIDDELKQMN 1132
Query: 1069 ISDLTKYHHTLENCVIKYHSQKMRSINR---------------LIREYWTRIYQ------ 1107
+ L + + S+ R + + RE T +Y
Sbjct: 1133 VGILATEKQVPRDTQRQLQSEARRFLRAKLEGQRATWAEQDKGITRELQTPLYNNVDDRF 1192
Query: 1108 ------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
+K +++ DL +YH L+ V+KYH+ KM+ IN +IRE W Y+G DID I
Sbjct: 1193 RKQLITVKTTKMANHDLEQYHKALDKAVMKYHAMKMQEINEIIRELWANTYKGADIDAIE 1252
Query: 1162 IAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----- 1213
I +DV T + R++YNYRVV K +E D+R RCSAGQ+VLACLIIR+ +S+
Sbjct: 1253 IRSDVDEEETQASGRKSYNYRVVMVKGEMEMDIRGRCSAGQKVLACLIIRMALSETFCLN 1312
Query: 1214 ----------------------------------QKNFQLIVITHDEEFIENL 1232
Q NFQL+VITHDE+F+ L
Sbjct: 1313 CGILALDEPTTNLDKDNIDSLAHALAKLVESRRAQHNFQLLVITHDEDFVAQL 1365
>gi|62320304|dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis thaliana]
Length = 554
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 120/215 (55%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + VV F RPLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F+H DP++ + ET A +KL+ T D VC +RS
Sbjct: 61 SGHSFIH--------------------DPKVAGETETKAQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
>gi|401424802|ref|XP_003876886.1| RAD50 DNA repair-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493130|emb|CBZ28415.1| RAD50 DNA repair-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1360
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 176/708 (24%), Positives = 307/708 (43%), Gaps = 150/708 (21%)
Query: 701 EPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYE 760
E C +C R F+SD S+ + + + + PE + + + +SL++L+ V
Sbjct: 693 EKTCAVCERPFDSDDSLESFLTRKADRQRTSPEALAAVQATVTAAQEAYQSLEKLQSVVV 752
Query: 761 NIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK------------------ 802
+ + + IP L +L LE+ + ++ E +++ + +
Sbjct: 753 TVRQNRHR-IPVLEVELNALEDKMKQSCAEQREVCATRDAAQHVVHQLDTMYQHLCMVCT 811
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV---------DLDQVL 853
EKT ++L+ L +++ Q++ E Q SG +T +L +
Sbjct: 812 MGEKT-VALRDTLARKEKDFEAAQAEQQQQETQRKGGSGDGATARAEPPQRSYEELCEAY 870
Query: 854 AQQKEKKNELN---TFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS 910
A E+ ++LN T ++E GQ N + LQ++K + ++ V L+
Sbjct: 871 AAATERLHKLNRQFTEAQRMERGQ----DENAAERELQERKAAMLQAEVAV----AKLED 922
Query: 911 LEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQD 970
LE EL+ + ++T +EEL R+ A + + Q + L+ E +K E +
Sbjct: 923 LEAAVRELQEEAAQHRTRVEELKRQAAEAQRSVEAHQQRVLQLRAEFQKTEAAERGALDT 982
Query: 971 YTKQLEEVKRIKLEILNYTKRGTLTQLAALR------ESVQKLNQRKEDIIAKRGVCERT 1024
QL E++ +L Y + G QL LR ES K ++E+ +A R
Sbjct: 983 AETQLRELQLSLPPVLRYVQNGCARQLEELRVHLHETESAYKAAAQEEEGLASR------ 1036
Query: 1025 INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDL-TKYHHTLENCV 1083
+ E +++++Q D+ ++ +L+++ ++A L +E ++ L + +E +
Sbjct: 1037 MKEARETLSDQHRRSADMDRHIDVLQQEASIAADEAHLAETERTLASLKSDRLQEVEQLL 1096
Query: 1084 IKYHSQ------------------KMRS------------INRLIRE------------Y 1101
K Q K+R+ +N+L ++ Y
Sbjct: 1097 GKEARQASLATLREMITAKITSLEKIRAQQDGNTEAMLLDVNQLKQQLRGDKYQNIEKRY 1156
Query: 1102 WTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
+ +++ +EI I D+ KY+ LE V YH +K+ IN++I E W + Y+G+D+D +
Sbjct: 1157 RSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIAELWRQTYRGSDVDTVE 1216
Query: 1162 IAADVGTGSEK--RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
I ++ + RR+YNYRVV K+ E DMR RCSAGQ+VLA +IIRL
Sbjct: 1217 IRSETEGTTTTAARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLASIIIRL---------- 1266
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA---S 1276
AL+E F +CGI ALDEPTTNLD NA +
Sbjct: 1267 -----------------------------ALSEAFCCDCGILALDEPTTNLDDDNARSLA 1297
Query: 1277 DQ-----------KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKG 1313
D K+FQL+VITHDE+F+ L +++D +G
Sbjct: 1298 DALRTLIQARRAVKHFQLVVITHDEQFVRALGGQSLEKFYYVLKDREG 1345
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 159/320 (49%), Gaps = 51/320 (15%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M +++L + G+R+F PA++ ++FQ+PLT+I+G+NG GKTTIIE + A T P
Sbjct: 1 MTSIEKLQLCGVRSFDPNPANQQ-FIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G+ + K +FV+DP++ + E A ++L T + + V+R
Sbjct: 60 GSGTEKG-------------------SFVYDPKVVGETEVKAQIRLIFTGKGGKLMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
S + + T D T++ + ATG V + V+ ++GVS A+L +V
Sbjct: 101 SFQATRSAHRVTFTTLDNTVAFQDLATGEVVSSTYRASDVDRVVP--EMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE +WPL K VK IFD+IF AT+Y AL+ ++ R+++ E +A A
Sbjct: 159 IFCHQEECNWPLGPPKDVKRIFDDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALR 218
Query: 236 NYKKEAD------SKKQLIYNNTQKRD-----------QSFEELHNIEESMKPI------ 272
++++A ++K+ + Q R Q+ E L +EE ++ +
Sbjct: 219 EHREQAKQLEQQIAQKESVVKAIQDRSIGIEPELRGLRQAREALRTVEEQIETLQREVAV 278
Query: 273 -NEKLVQLTEKERNMSVMST 291
N +L + E R M V +T
Sbjct: 279 TNGRLEERREAVRRMGVPAT 298
>gi|221487186|gb|EEE25432.1| DNA repair protein Rad50, putative [Toxoplasma gondii GT1]
Length = 1599
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 28/220 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L + GIR F D V+ F++PLT+IVG NG GKTT++EC+KFA T E P
Sbjct: 1 MATLERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTGELPPCVD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ +V DPR+ D A E A V+L+ + + VVRS+
Sbjct: 61 RGRGWVFDPRL--LDAA------------------EVKAQVRLRIHTKGGKELTVVRSMQ 100
Query: 121 LS---NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
LS ++ GK T K ATG + ++G + L++ L+G+ +A+L +V+F
Sbjct: 101 LSQTVDRKGKTK-----ATFKLKDSATGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVF 155
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
CHQE S WPL + + +K+ FD++F AT+Y KALESI+ R
Sbjct: 156 CHQEESCWPLSDMQVLKKKFDQLFGATRYVKALESIRAIR 195
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 44/216 (20%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y + + ++ + DL +YH L+ ++KYHS KM+ IN ++E W +Y G+DID+I
Sbjct: 1380 YRSALVDAEIEAMAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTMYTGHDIDFI 1439
Query: 1161 SIAAD-----VGTGS--------------EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
+I +D G + +R+YNYRVV K G+E DMR RCSAGQ++
Sbjct: 1440 AIRSDTEEQTAGAPTSLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMRGRCSAGQKI 1499
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
LA LIIRL +++ V+ D E T +DR + + AL E +
Sbjct: 1500 LASLIIRLALAETFCVHCGVLALD----EPTTNLDRFNCESLAKALAALVEARRTSA--- 1552
Query: 1262 ALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLT 1297
+FQLI+ITHDE+F+ L
Sbjct: 1553 ------------------SFQLILITHDEQFVMKLA 1570
>gi|221506871|gb|EEE32488.1| DNA repair protein Rad50, putative [Toxoplasma gondii VEG]
Length = 1599
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 28/220 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L + GIR F D V+ F++PLT+IVG NG GKTT++EC+KFA T E P
Sbjct: 1 MATLERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTGELPPCVD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ +V DPR+ D A E A V+L+ + + VVRS+
Sbjct: 61 RGRGWVFDPRL--LDAA------------------EVKAQVRLRIHTKGGKELTVVRSMQ 100
Query: 121 LS---NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
LS ++ GK T K ATG + ++G + L++ L+G+ +A+L +V+F
Sbjct: 101 LSQTVDRKGKTK-----ATFKLKDSATGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVF 155
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
CHQE S WPL + + +K+ FD++F AT+Y KALESI+ R
Sbjct: 156 CHQEESCWPLSDMQVLKKKFDQLFGATRYVKALESIRAIR 195
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 44/216 (20%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y + + ++ + DL +YH L+ ++KYHS KM+ IN ++E W +Y G+DID+I
Sbjct: 1380 YRSALVDAEIEAMAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTMYTGHDIDFI 1439
Query: 1161 SIAAD-----VGTGS--------------EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
+I +D G + +R+YNYRVV K G+E DMR RCSAGQ++
Sbjct: 1440 AIRSDTEEQTAGAPASLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMRGRCSAGQKI 1499
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
LA LIIRL +++ V+ D E T +DR + + AL E +
Sbjct: 1500 LASLIIRLALAETFCVHCGVLALD----EPTTNLDRFNCESLAKALAALVEARRTSA--- 1552
Query: 1262 ALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLT 1297
+FQLI+ITHDE+F+ L
Sbjct: 1553 ------------------SFQLILITHDEQFVMKLA 1570
>gi|237831333|ref|XP_002364964.1| DNA repair protein Rad50, putative [Toxoplasma gondii ME49]
gi|211962628|gb|EEA97823.1| DNA repair protein Rad50, putative [Toxoplasma gondii ME49]
Length = 1599
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 28/220 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L + GIR F D V+ F++PLT+IVG NG GKTT++EC+KFA T E P
Sbjct: 1 MATLERLGVQGIRCFAPDHLEVIAFEKPLTVIVGHNGAGKTTVVECLKFATTGELPPCVD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ +V DPR+ D A E A V+L+ + + VVRS+
Sbjct: 61 RGRGWVFDPRL--LDAA------------------EVKAQVRLRIHTKGGKELTVVRSMQ 100
Query: 121 LS---NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
LS ++ GK T K ATG + ++G + L++ L+G+ +A+L +V+F
Sbjct: 101 LSQTVDRKGKTK-----ATFKLKDSATGQKASIGNKCADIDLQLPGLLGIHRAVLEHVVF 155
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
CHQE S WPL + + +K+ FD++F AT+Y KALESI+ R
Sbjct: 156 CHQEESCWPLSDMQVLKKKFDQLFGATRYVKALESIRAIR 195
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 44/216 (20%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y + + ++ + DL +YH L+ ++KYHS KM+ IN ++E W +Y G+DID+I
Sbjct: 1380 YRSALVDAEIEAMAAKDLDRYHRALDKALMKYHSMKMQEINATMKELWQTMYTGHDIDFI 1439
Query: 1161 SIAAD-----VGTGS--------------EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
+I +D G + +R+YNYRVV K G+E DMR RCSAGQ++
Sbjct: 1440 AIRSDTEEQTAGAPASLFGNASSSASAPAAGQRSYNYRVVMVKGGVELDMRGRCSAGQKI 1499
Query: 1202 LACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIF 1261
LA LIIRL +++ V+ D E T +DR + + AL E +
Sbjct: 1500 LASLIIRLALAETFCVHCGVLALD----EPTTNLDRFNCESLAKALAALVEARRTSA--- 1552
Query: 1262 ALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLT 1297
+FQLI+ITHDE+F+ L
Sbjct: 1553 ------------------SFQLILITHDEQFVMKLA 1570
>gi|449518167|ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 1088
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 196/777 (25%), Positives = 368/777 (47%), Gaps = 145/777 (18%)
Query: 592 PEENFKNSLDKALSSITFDINRI-------QEDINAKEKHLYTLEANVSNSSKTLRDQKR 644
PE++ K + +AL ++ + + + ++D+N + + + N+S K + +KR
Sbjct: 348 PEKDLKKEITQALRAVGMEYDDLNSKSREAEKDVNMLQMKIQEVNHNLSRYQKEMESRKR 407
Query: 645 TLAELMDRMELVLGSKPFEDELDRVTLELKREQEEV-----SMMTSTQYLFNSYIGKLEE 699
+ + ++ + F +L LE +E+++V ++ + +F+ + ++
Sbjct: 408 FVESKLQSLDPL----SFSVDLYLKALEGAKEKKDVQKSKYNIADGMRQMFDPF-ERVAR 462
Query: 700 NEPRCPLCTRFFESDYSVPGLVNKLKTK-------IKEIPEQTNNKKTHIDQLCKQQRSL 752
CP C R F ++ V K + K +K + ++++ +H QL K
Sbjct: 463 AHHVCPCCERPFTAEEE-DEFVKKQRVKAASSAEHMKVLAVESSSSDSHFQQLDK----- 516
Query: 753 QELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQ 812
L+ V+E +KL + IP+ +L +L E + E L + L K + +L
Sbjct: 517 --LRMVFEEYVKLSNETIPNAEKELHQLNEELDEKSQALDDVVGVLAQVKADRDSVENLV 574
Query: 813 GDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIES 872
+ D+ +E+ TLQ++++ K+ R GV +E ++ELNT ++
Sbjct: 575 QPIDTADRLYQEIQTLQKQVDDLVYKLD-FRGKGV------KTLEEIQSELNTLQN---- 623
Query: 873 GQTRLNSHNE--KLQSLQK-QKNDIHSKQLTVQG-------GAGMLKSLEDRKCELEGM- 921
T+ HNE KL+ Q+ +ND+ + Q+ A L+ + + EL+ +
Sbjct: 624 --TKDGLHNELEKLRDEQRYMENDLANIQIRWHTLREEKVKAANTLRDVRKAEEELDRLT 681
Query: 922 DSVYQTELEE--LGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVK 979
+ Q +L+E L + P+ + + ++ + LK + ++ E G K + + +++E +
Sbjct: 682 EEKGQVDLDEKHLAEALIPLSKEKDKLLNDYNELKDKLNREYEELGDKKRKFQQEVETLL 741
Query: 980 RIKLEILNYT--KRGT----LTQLAALRES-VQKLNQRKEDIIA---------------K 1017
R +I Y K+G L + A ES +Q + RK++I+A +
Sbjct: 742 RTTSKIKEYLDLKKGERLKELQEKKAQAESQLQGCDSRKQEILAELNKSKDLMRNQDQLR 801
Query: 1018 RGV--------CERTINEINQSIANQSLEEIDLK-NNLTLLEKKEAVAKLNEELKLSEIM 1068
R + + ++E+ + I +SLEE LK ++ +E + + KL++E E +
Sbjct: 802 RNIEDNLNYRKTKAEVDELARDI--ESLEEQILKIGGVSTVEAE--IGKLSQE---RERL 854
Query: 1069 ISDLTKYHHTL--------ENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTK 1120
+S+L ++H T+ +N + H Q + I++ Y+ ++ QLK +E+ DL +
Sbjct: 855 LSELNRFHGTMSVYQSNISKNKIDLKHVQ-YKDIDK---RYFDQLIQLKTTEMANKDLDR 910
Query: 1121 YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRTYNYR 1179
Y++ L+ ++++H+ KM IN++IRE W + Y+G DIDYISI +D G G+ R+Y+YR
Sbjct: 911 YYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGT---RSYSYR 967
Query: 1180 VVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAID--- 1236
V+ + E +MR RCSAGQ+VLA LIIRL +++ ++ DE NL +
Sbjct: 968 VLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTT-NLDGPNAES 1026
Query: 1237 -RAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEF 1292
A ++RI+ D K Q+NFQLIVITHDE F
Sbjct: 1027 LAAALLRIMEDRKG----------------------------QENFQLIVITHDERF 1055
>gi|408400423|gb|EKJ79504.1| hypothetical protein FPSE_00323 [Fusarium pseudograminearum CS3096]
Length = 1307
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 190/378 (50%), Gaps = 48/378 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKLQ N+ RS+
Sbjct: 61 GGA---------------------FIHDPKLCGEKEVLAQVKLQFRSINDRQHVATRSVQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D+++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDSSL---VVVNNGERTTTSTRQAQMDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA++++K+ R + +++ +++ AH + +
Sbjct: 157 QDESLWPLSEPAALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLGKLQNDEAHNKVNKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
A+ + + + + S E +I M+ EK+ E + + TK
Sbjct: 217 RGDRAEKRMKALQAEIEG---SRETCESISAEMEETQEKIRTTRETANSHLAIVQNLDTK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + + +E+ EL+S+I++L D +L+S L + ++R+ Q++Q+
Sbjct: 274 REQLEYREEAVKELKSTIEELHDDD-GKLESDLAHY-------------EDRM--QHLQD 317
Query: 357 EK-QSHTHINEAQMKLGK 373
+ Q+ NE Q +LG+
Sbjct: 318 DADQNKAQYNELQKELGQ 335
>gi|113913513|gb|ABI48900.1| RAD50 [Saccharomyces cariocanus]
Length = 1312
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 170/663 (25%), Positives = 297/663 (44%), Gaps = 116/663 (17%)
Query: 662 FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLV 721
+ D L+ L K E + M +T FN ++ E + C LC+R FE++ L+
Sbjct: 646 YNDVLEETELSYKTALENLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENELFKSKLL 704
Query: 722 NKLKTKI-----KEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDT------DI 770
+LKTK K + + N+K ++ L ++ + L V E I Q+ +
Sbjct: 705 QELKTKTDANFEKTLKDTVRNEKDYLHNLRLLEKHIILLNSVNEKINNAQECLEKAKEET 764
Query: 771 PSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIREL----N 826
+ +SKL ELE N + K E + E L T L++ +++L
Sbjct: 765 KTSKSKLDELEMNSTKLKNE----------KEFAESEIRPLIEKFTYLEKELKDLENSSK 814
Query: 827 TLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQS 886
T+ EL + G+++ +D++ QQ++ + L R I Q +EK++
Sbjct: 815 TISEELSIYNTSEDGIQT----VDELRDQQRKMNDSLRELRKSISDLQME---KDEKVRE 867
Query: 887 LQKQKNDIHSKQLTVQGGAGML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
+ N I K+L V L S+ +K ++ +DS +E L ++ +
Sbjct: 868 NSRMINLIKEKELMVSEIESSLTQKQNIDDSIRLKKANIKDIDS----RVEALEARIISL 923
Query: 940 ETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG---TLTQ 996
+ + + AQ+ LD +K E ++ + + D + ++ + I E++++ +G T
Sbjct: 924 KNKKDEAQNILDQVKYERDLQVRNKQKTVADVNRLIDRFQTIYNEVVDFEAKGFDELQTT 983
Query: 997 LAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVA 1056
+ L+ + K+ + KE + K +NE + +A+ + EE +LK NL L+E K +
Sbjct: 984 IKELKLNKIKMQELKEQLDLKTN----EVNEEKRKLADSNNEEKNLKQNLELIELKSQLQ 1039
Query: 1057 KLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS---------------INRLI--- 1098
+ E+ ++ ++ + + E+ ++ + +K+ S IN L
Sbjct: 1040 DIESEISELDVQNAEAERDKYQEESLRLRTNFEKLSSENAGKLGEMKQLQNQINSLTHQL 1099
Query: 1099 --------REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+ Y +L+ + D+ Y L++ ++KYH KM+ INR+I E W R
Sbjct: 1100 RTDYKDIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKR 1159
Query: 1151 IYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
Y G DID I I +D + + K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL
Sbjct: 1160 TYSGTDIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLA 1219
Query: 1211 ISD---------------------------------------QKNFQLIVITHDEEFIEN 1231
+S+ QKNFQLIVITHDE+F+ +
Sbjct: 1220 LSETFGANCGVIALDEPTTNLDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGH 1279
Query: 1232 LTA 1234
+ A
Sbjct: 1280 MNA 1282
>gi|393909325|gb|EJD75407.1| Rad50 family protein [Loa loa]
Length = 1137
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 218/868 (25%), Positives = 371/868 (42%), Gaps = 134/868 (15%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M+LLD + + GIR+ P + N V+ F PLT+I G NG GKTTIIE +K+ T E P+
Sbjct: 81 MSLLDTVELQGIRSVGVGPQNAN-VIEFLSPLTIICGTNGAGKTTIIEALKYVTTGELPK 139
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G S + F+HD R+ + AS F D R G+ CVV
Sbjct: 140 G--SFQTFIHDMRLADRSRVDASVKLKF-RDVR-GRS-------------------CVVT 176
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFAT--------GVQKNLGCLQQESVLEMCNLIGVSK 169
++ +K K +T + I+ K + G K+L + E+ NL+G+
Sbjct: 177 RRIMQSKGAKVKHSTSEGKITNKSEESTIAIEKEPGEWKSLSSKVVDCRKEILNLLGLPT 236
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALE-----------SIKIQRD 218
AIL V+FCHQE SSWPLDE KK+KE FDEIF T Y KA+E ++I
Sbjct: 237 AILEYVVFCHQEESSWPLDEPKKLKERFDEIFQVTGYVKAMEILRKELKENQQELRIIEG 296
Query: 219 RL----RKEIPEIKAHYQATLNYKKE-ADSKKQLIYNNTQKRDQSFEELHNIEESMKPIN 273
RL R++ +I+ H + +N K + A+++K+++ T ++E N
Sbjct: 297 RLPLLIRQQEEKIELHNE-YINLKGQVAENEKEILLKQTV-----------LKEDTAKKN 344
Query: 274 EKLVQLTEKERNMSVMSTQYQTKKTERDMIQES----CNELESSIKQLFSGDKAELQSKL 329
K+ +L E E K +RDM++ +++E + + G L+ ++
Sbjct: 345 LKIAELDEAE-----------MLKKKRDMMEAEKQVLLDQIECCLALDYEGGIENLKREI 393
Query: 330 NLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLK 389
L IN E E+ ER + + E + I E K KK D ++
Sbjct: 394 EL--IN---HSDEFEDMERNRKRINAEIDELSAEIKEYVAK-----------KKEIDKMR 437
Query: 390 TKL----NNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENT 445
K+ +T CL +++ T G++K I+K +I + + +
Sbjct: 438 CKMIAEREQCLETYCLRFNLRNEQT-----GILKQLHHLIEKRKEEISNFKNRMEEKQTN 492
Query: 446 KQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRV 505
Q E++ + ++ +KI+ ++ + +KD+ + E S L LQ ++ +
Sbjct: 493 CQKEVDDISGTLAQVSAKIELRNEECKRLEKDIAAAKCNLMEAANSSDKLDRLQEEILKQ 552
Query: 506 NSEIDQL-SKSLD--PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSL 562
+E+D + K L+ D LKNE + + L+ E C+ + I I ++ +
Sbjct: 553 ENELDVMREKELENNVDDLKNERDGIANRIELLKKEYCMRENAEGI--ENKIKQRSVELV 610
Query: 563 KNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKE 622
K KE +N+LKE+H A +F E F S +T + ++ ++ E
Sbjct: 611 KFEKE-----LNILKEKHQIALLEIFS-TKEPEFPLS-----ERLTIYARKAEQSLSTAE 659
Query: 623 KHLYTLEANVSNSSKTLRDQKRTLAELMDRME---------LVLGSKPFEDELDRVTLEL 673
E VS + + R + L D++ +V E LD + L
Sbjct: 660 DEFKICEKEVSRAQFAISQIDREMDYLSDQIGSYRRKITQVIVTHENEVETRLDEIRTLL 719
Query: 674 KREQEEVSMMTSTQYLFNSYIGKLEENEPR--CPLCTRFFESDYSVPGLVNKLKTKIKEI 731
++ Q++ + +L+ + EE R CPLC + S L K+K + K++
Sbjct: 720 RKSQQDSGRIDGCMFLYEQW---EEEVVMRKCCPLCEHSYSSTEGPVVLKEKIKQRKKDL 776
Query: 732 PEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGEL 791
+ + Q L E+ P Y ++K +++ L+ L + EE + + E
Sbjct: 777 AKDAEKLIRKVKDYEAVQNELLEIVP-YVEMLKQSNSEKEKLQGNLKKAEEKLHNVEAEF 835
Query: 792 KKLKTALETPKTKEKTALSLQGDLTLLD 819
K K+ + K +QGD +L+D
Sbjct: 836 AKSKSERDIILQKLDVIRDVQGDASLMD 863
>gi|343960124|dbj|BAK63916.1| DNA repair protein RAD50 [Pan troglodytes]
Length = 192
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 125/208 (60%), Gaps = 25/208 (12%)
Query: 1 MALLDQLHIMGIRNFPA-DKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKY 206
HQE+S+WPL EGK +K+ FDEIF AT+Y
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRY 185
>gi|115446227|ref|NP_001046893.1| Os02g0497500 [Oryza sativa Japonica Group]
gi|41056568|gb|AAP34688.2| DNA repair-recombination protein [Oryza sativa Japonica Group]
gi|113536424|dbj|BAF08807.1| Os02g0497500 [Oryza sativa Japonica Group]
Length = 1316
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 120/215 (55%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P +
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNSR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG FVHDP++ +G+ ET +KL+ T D VC +RS
Sbjct: 61 SGHTFVHDPKV---------AGET-----------ETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEFKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
>gi|322705558|gb|EFY97143.1| DNA repaire protein UVS6 [Metarhizium anisopliae ARSEF 23]
Length = 1307
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 188/376 (50%), Gaps = 46/376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKLQ N+ RSL
Sbjct: 61 GGA---------------------FIHDPKLCGEKEVMAQVKLQFRSINDRQHVATRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDCSL---VVVNNGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA++++K+ R + +++ +++ AH +A +
Sbjct: 157 QDESLWPLSEPAALKKRFDEIFEALKYTKAIDNLKVLRKKHVEQLGKLQNDEAHNKANKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ + + + + E+ + M+ +K+ + E+ + + K
Sbjct: 217 RGERAEKRMTGLQAEIE---DAREKCETLSAEMQETQDKIRRKHEQANSFLQIVQNLGNK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
K + + Q++ NEL+ + ++L D A L++ L ++ +++ +Y +E
Sbjct: 274 KEQLEYRQDAVNELKQTFEELHE-DDASLETALAQYENSME--------------RYREE 318
Query: 357 EKQSHTHINEAQMKLG 372
+QS + N+ Q +L
Sbjct: 319 AEQSKSQYNDLQQELA 334
>gi|342890233|gb|EGU89081.1| hypothetical protein FOXB_00354 [Fusarium oxysporum Fo5176]
Length = 1311
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 190/378 (50%), Gaps = 44/378 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P S
Sbjct: 1 MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN-S 59
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP+ V G+K E A VKLQ N+ RSL
Sbjct: 60 KGGAFIHDPK---------------VPTCLCGEK-EVMAQVKLQFRSINDRQHVATRSLQ 103
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 104 LTVKKTTRSQKTLDCSL---VVVNNGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCH 160
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA++++K+ R + +++ +++ AH + +
Sbjct: 161 QDESLWPLSEPAALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLGKLQNDEAHNKVNKD 220
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
A+ + + + + S E +I M+ +K+ + E + + TK
Sbjct: 221 RGDRAEKRMKALQAEIEG---SRETCESISSEMEETQDKIRNIRETANSHLAIVQNLNTK 277
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + + +E+ EL+++I +L D +L+ L + ++R+ Q++Q+
Sbjct: 278 REQLEYREEAVKELKATIDEL-PDDDGKLEGDLAHY-------------EDRM--QHLQD 321
Query: 357 EK-QSHTHINEAQMKLGK 373
E Q+ NE Q +LGK
Sbjct: 322 EADQNKAQYNELQTELGK 339
>gi|322692510|gb|EFY84416.1| DNA repaire protein UVS6 [Metarhizium acridum CQMa 102]
Length = 1307
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 188/376 (50%), Gaps = 46/376 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKLQ N+ RSL
Sbjct: 61 GGA---------------------FIHDPKLCGEKEVMAQVKLQFRSINDRQHVATRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDCSL---VVVNNGERTTTSTRQAQLDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA++++K+ R + +++ +++ AH +A +
Sbjct: 157 QDESLWPLSEPAALKKRFDEIFEALKYTKAIDNLKVLRKKHVEQLGKLQNDEAHNKANKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ + + + + E+ + M+ ++K+ + E+ + + K
Sbjct: 217 RGERAEKRMTGLQAEIE---DAREKCEALSAEMQETHDKIRRKYEQANSFLQIVQNVGNK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
K + + Q++ NEL+ + +L D A L++ L ++ +++ +Y +E
Sbjct: 274 KEQLEYRQDAVNELKQTFDELHEDD-ASLETALAQYENSME--------------RYREE 318
Query: 357 EKQSHTHINEAQMKLG 372
+QS + N+ Q +L
Sbjct: 319 AEQSKSQYNDLQQELA 334
>gi|449528203|ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 299
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 158/305 (51%), Gaps = 24/305 (7%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F +HDP++ + ET +KL+ T D VC +RS
Sbjct: 61 SGHSF--------------------IHDPKVAGETETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKA+L NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQRDRLRKEIPEIKAHYQATLNYK 238
Q+ ++WPL + +K+ FD+IF AT+Y KALE I K+ +D+ EI K + K
Sbjct: 160 QDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAH-EIKTYKLKLENLQTLK 218
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
A ++ I + +K + ++ +E++++ ++ K+ +++ + Q TK
Sbjct: 219 DAAYKLRESISQDQEKTESVKGQMQELEKNIQDVDAKIHHAETLLKDVRKLQDQISTKTA 278
Query: 299 ERDMI 303
ER +
Sbjct: 279 ERSTL 283
>gi|46107656|ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1]
Length = 1976
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 189/378 (50%), Gaps = 48/378 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKLQ N+ RS+
Sbjct: 61 GGA---------------------FIHDPKLCGEKEVLAQVKLQFRSINDRQHVATRSVQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D+++ + ++ +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDSSL---VVVNNGERTTTSTRQAQMDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA++++K+ R + +++ +++ AH + +
Sbjct: 157 QDESLWPLSEPAALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLGKLQNDEAHNKVNKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
A+ + + + + S E +I M+ EK+ E + + TK
Sbjct: 217 RGDRAEKRMKALQAEIEG---SRETCESISAEMEETQEKIKTTRETANSHLAIVQNLDTK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + + +E+ EL+S+I +L D +L+S L + ++R+ Q++Q+
Sbjct: 274 REQLEYREEAVKELKSTIDELHD-DDGKLESDLAHY-------------EDRM--QHLQD 317
Query: 357 EK-QSHTHINEAQMKLGK 373
+ Q+ NE Q +LG+
Sbjct: 318 DADQNKAQYNELQKELGQ 335
>gi|403349168|gb|EJY74026.1| DNA repair protein RAD50 [Oxytricha trifallax]
Length = 1350
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 133/267 (49%), Gaps = 30/267 (11%)
Query: 1 MALLDQLHIMGIRNF-PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ +++L I GIR+F P D+ ++ F +PLTLI+G+NG GKTTIIE ++ + P
Sbjct: 1 MSSIEKLAIRGIRSFSPFDEEKI-EFYKPLTLILGQNGAGKTTIIESLRTMTSGSMPPHT 59
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
GK F+HDPRI + E AS +KL N V +RS
Sbjct: 60 QGGKTFIHDPRISNQPETKAS--------------------IKLVINTIKNKPVFAMRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATG--VQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
L NK K + + K TG + N C + L + L+GVS AIL NVIF
Sbjct: 100 QLMNKKQKQEFKKLEQVLKAKDERTGQEISINKNCADMDRHLPL--LMGVSNAILENVIF 157
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQE S WP + +K+IFDEIFD TKY KAL +++ + K + K L+
Sbjct: 158 CHQEESLWPFSDQTNLKKIFDEIFDTTKYTKALNEMRVSAKKYSKYAKDFKTE----LDL 213
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHN 264
KK+ + + +N + D EL N
Sbjct: 214 KKKDYEQYAKLKSNVTQYDNKLRELRN 240
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 121/232 (52%), Gaps = 58/232 (25%)
Query: 1110 LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTG 1169
L++ M ++++ H LE ++KYH +KM+ IN+ + ++W Y+GNDID I I +D
Sbjct: 1157 LTKDMAIEISEKHDALEEALMKYHQEKMKEINKTLSDFWKMTYKGNDIDTIEIKSDDEKQ 1216
Query: 1170 SEKR-RTYNYRVVQKK-NGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEE 1227
R R+YNYR+V K + E DMR RCSAGQ+VL+ +IIRL
Sbjct: 1217 PNSRIRSYNYRIVLKTYDDTELDMRGRCSAGQKVLSSIIIRL------------------ 1258
Query: 1228 FIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD---------- 1277
+LAETF NCGI ALDEPTTNLD+ N
Sbjct: 1259 ---------------------SLAETFCSNCGILALDEPTTNLDVDNIEGLAGALIEIIE 1297
Query: 1278 ----QKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDI---HLRSL 1322
Q+NFQLI+ITHD++F++ L Y R+ +D+ G S I H++ L
Sbjct: 1298 SRRRQENFQLIIITHDQQFVQLLGREYAEYYWRVAKDNSGYSRIIKDHVKKL 1349
>gi|346325821|gb|EGX95417.1| Recombination/repair protein Rad50 [Cordyceps militaris CM01]
Length = 1307
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 194/387 (50%), Gaps = 32/387 (8%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSRIEKLSISGVRSFSPACREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP++ + E A VKLQ N+ RSL
Sbjct: 59 -------------------SKGGAFIHDPKLCGEKEVLAQVKLQFRSINDRQHVATRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + +K +Q + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDCSL---VVLNNGEKTTTSTRQAQLDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
Q+ S WPL E +K+ FDEIF+A KY KA+E++K+ R + +E+ +++ K
Sbjct: 157 QDESLWPLSEPSVLKKRFDEIFEALKYTKAIENLKVLRKKQVEELGKLQNDEFHNKGNKD 216
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTE 299
D ++ + + + + E+ I M+ +K+ Q E+ + + K+ +
Sbjct: 217 RGDRAEKRMTGLQAEIEAAREKCEAITAHMQETQDKIKQKHEQANSFLQIVQNLGNKREQ 276
Query: 300 RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI---QE 356
D Q++ +EL +I +L D++ L+ +L ++ ++ + E +R K+QY Q+
Sbjct: 277 LDYRQDAVDELRQTIDELPEDDRS-LERQLVQYEESMRRQSEEA---QRNKTQYGDLQQD 332
Query: 357 EKQSHTHINEAQMKLGKLERDEETHKK 383
+S ++ + GK + D+E H++
Sbjct: 333 LVKSRKSLSTKLAEQGKHQSDKEKHER 359
>gi|66801073|ref|XP_629462.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
gi|74996470|sp|Q54CS9.1|RAD50_DICDI RecName: Full=DNA repair protein RAD50; AltName: Full=DNA
recombination/repair protein
gi|60462868|gb|EAL61067.1| DNA recombination/repair protein [Dictyostelium discoideum AX4]
Length = 1351
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 165/652 (25%), Positives = 310/652 (47%), Gaps = 100/652 (15%)
Query: 662 FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLV 721
FE++++ + L L++ ++ ++ S L+ YI K +++ C LC + + V
Sbjct: 691 FENKINEMKLSLEKLEKSFIVLESEDILYKEYIEKANQDK-ECSLCKNEMNGN-ELTSFV 748
Query: 722 NKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELE 781
+ L+T +IP Q K I Q +L P+ +L + IP L+ E +
Sbjct: 749 HTLETHCNDIPNQLKQLKIEISNSKIQLEKFNKLLPIIVKREELIEKSIPELK----ESQ 804
Query: 782 ENVIETKGELKKLKTALETPKTKE----KTALSLQGDLTL--LDQNIRELNTLQRELERQ 835
+N++E +LK + LE E ++ L Q L +DQ + + +++ E++++
Sbjct: 805 KNLLEQ--QLKSNEMVLEKQNQIESLESQSVLYQQVTLVFQYIDQTKQSIQSIESEIQKE 862
Query: 836 ESKI----SGMRSTG-VDLDQVLAQQKEK--KNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
E +I S +R+ VD D + Q++ K + E++ F +K ++ Q + +L S++
Sbjct: 863 EKEIMKQSSDLRTIEEVDKDLEIQQEQLKTIEKEISNFTNKQKNDQIGIFEKERQLISIK 922
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
Q T++ +G++ L D K EL+ + Q E+E L + + ++
Sbjct: 923 NQLT-------TIKSASGIIDHLRDTKKELQSNNQQLQLEIENLQQSIDQSNNDAKQLEN 975
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
E L+ E +KK++ + ++ +L+ + ++ +IL+ ++ QL ++E Q+L
Sbjct: 976 EFQQLEIEFEKKIDAYSKEKNTFSVRLDSINSLQSKILDPSE--LCKQLNEIQEKNQELE 1033
Query: 1009 QRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK----- 1063
+ + ++ I+ I Q+++++ + + + +N++ + K V ++ ++
Sbjct: 1034 SNLSTLSQDYLIGQQHISTIQQNLSSKDITKRAISDNISFRQHKNNVEQIIRQISRKNEL 1093
Query: 1064 LSEIMISDLTKYHHTLENCV---------IKYHSQKMRS-INRLIREYWTRIYQ------ 1107
+ E+M S L + LE + I + ++S IN +E Y+
Sbjct: 1094 IKEMMQSQLEIDSNKLEQEINSLKSKFDQITGQTAVLQSQINSNRQELSKPTYKNIDDVN 1153
Query: 1108 ------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
L+ +E + DL KY+ L+ ++KYH+ KM INR I+E W Y+G+DID I
Sbjct: 1154 KDLLIKLQTTETVGKDLDKYYKALDKSLMKYHTLKMDEINRSIKEIWQTTYKGSDIDTIE 1213
Query: 1162 I-AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------- 1213
I + + GT + +T NYRVV K +E DMR RCSAGQ+VLACL+IRL +++
Sbjct: 1214 IRSEESGTAN---KTINYRVVMIKGDVELDMRGRCSAGQKVLACLVIRLALAENFCSNCG 1270
Query: 1214 --------------------------------QKNFQLIVITHDEEFIENLT 1233
QK FQLI+ITHDEEF++ L+
Sbjct: 1271 ILALDEPTSHLDRANIESFANSLLNIIESRKSQKGFQLIIITHDEEFVQYLS 1322
>gi|399216455|emb|CCF73143.1| unnamed protein product [Babesia microti strain RI]
Length = 848
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 134/263 (50%), Gaps = 40/263 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M ++ + I GIR+F +K +RF++PLTLIVG NG GKTT+IEC+K A T E P
Sbjct: 1 MTTVEMIGIQGIRSFSPEKMETLRFEKPLTLIVGHNGSGKTTLIECLKVATTGELPPNVD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
GKNF+HDP+I E A +KL N + VC R
Sbjct: 61 KGKNFIHDPKIDNVPEVRAQ--------------------IKLTFKAFNGNMVCATRIYQ 100
Query: 121 LSN---KNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC--------NLIGVSK 169
L N K GK + + +R + +Q L ++ V C +LIG+SK
Sbjct: 101 LLNVKDKIGKIKQSFKVINSTRVALESVLQVKLPTGEESCVSHKCVDMDIAVPSLIGLSK 160
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKA 229
A+L++VIFCHQEN++WPL + VK+ FD++F +++ ALE+I + RKE E+K
Sbjct: 161 AVLDSVIFCHQENNTWPLSDNATVKKRFDDLFQTSRFALALEAI----GKARKEQLEVKK 216
Query: 230 HYQATL-----NYKKEADSKKQL 247
L N + D +KQL
Sbjct: 217 DKNVYLHICKSNLSQAKDYEKQL 239
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 103/215 (47%), Gaps = 57/215 (26%)
Query: 1103 TRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI 1162
T I K+ +I DL Y +L+ + KYH +KM IN I+ W +Y GNDIDYI+
Sbjct: 651 TVILAEKVFHFIIQDLAVYQKSLDLALTKYHYKKMEEINIAIKSIWQELYTGNDIDYIAG 710
Query: 1163 AADVGT---GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
+ E ++++YR+V NG E DMR RCSAGQR+LA L+IRL
Sbjct: 711 GETIDIVRFNEETDKSFHYRIVMSINGTELDMRGRCSAGQRMLASLVIRL---------- 760
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA---- 1275
ALAE F +NCGI ALDEPTTNLD+ +
Sbjct: 761 -----------------------------ALAEIFCQNCGILALDEPTTNLDVSHVKGLG 791
Query: 1276 ----------SDQKNFQLIVITHDEEFIENLTAID 1300
FQLI+ITHDEEF L A+D
Sbjct: 792 ESLARLVNERKSLHGFQLILITHDEEFASKL-ALD 825
>gi|328351032|emb|CCA37432.1| DNA repair protein RAD50 [Komagataella pastoris CBS 7435]
Length = 1342
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 219/887 (24%), Positives = 388/887 (43%), Gaps = 170/887 (19%)
Query: 486 NEVNQSQSTLQVLQTKLNRVNS----------EIDQLSKSLDPDQLKNEIEAWIRQRNEL 535
N++N + Q LQ +N +NS +I++L+K L+ + +N++ + +
Sbjct: 490 NDINSLKKRNQALQKSINDINSNESEFNETKEDIERLTKQLEDLRSENKLASINNDLKQN 549
Query: 536 EDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE-- 593
+D++ V++ E+ + Q IT NR+ LA ++LLKE + + ++
Sbjct: 550 QDKILVLENELDQINKQIIT-------SNRQGEVLAKLHLLKENTKKGNSSISKLVESYG 602
Query: 594 ENFKNSLDKALSS-----ITFDI-NRIQEDINAKEKHLYTLEANVSNSS-------KTLR 640
E FK + L+ + ++ + QED + K K + + + N S+ K L
Sbjct: 603 EQFKEFTGEDLNPEDCLPVFLEVLKKRQEDTDLKRKEVASFKQNEYESNHDRSLLEKKLE 662
Query: 641 DQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQE---EVSMMTSTQYLFNSYIGKL 697
+ L E R+ +L +P E E + + +L+ + E + S + FN K+
Sbjct: 663 QSRSQLQECRSRIVSILEDEPIE-EYESIVKDLESDYEIALQNSKLNWATKNFNETALKI 721
Query: 698 EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKP 757
+ C LC R D P +V I E E+ N D L +++ +K
Sbjct: 722 AKEHQYCILCKRELNHDELGPVMVT-----ISENIEKAN------DDLYSKEKD--RIKQ 768
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS-LQGDLT 816
+++ ++D DI + R+ LE ++ EL +LKT + + + L L+ DL
Sbjct: 769 DLDDLKSIRD-DISNFRN----LEGSIASANDELNELKTFVSDDLARVSSELEQLESDLV 823
Query: 817 LLD---QNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTF---RSKI 870
L+ +++ E++ LQ DL + K ++EL+ + +
Sbjct: 824 SLESLRKHVVEISKLQE-----------------DLSHYYVENKSIESELSAYGVPAKTL 866
Query: 871 ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS-LEDR-------------KC 916
Q LN N +L+ L++Q +D+ ++ ML+ ++D+ K
Sbjct: 867 SELQEDLNGKNFQLKELRRQADDLKEQREFSNRELSMLEGNVKDKRLLISNFEKSLMIKL 926
Query: 917 ELE-GMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEG----AKIQDY 971
LE G+D + ++EL + + + L + L+ LK ++ K L EE ++Q
Sbjct: 927 NLEKGIDE-NKARIDELQQTGETVLESMKLTKDRLNKLK-DNVKTLEEERDSTLTQLQSN 984
Query: 972 TKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCER---TINEI 1028
+Q + V+ + + ++ + L LR+ + K I G + +N +
Sbjct: 985 VEQFKTVQDSLVRLNSFVNKYELEDEPILRQCEKNSEHLKASIKDAEGQLNKLHEKVNVL 1044
Query: 1029 NQSIANQSLEEIDLKNNLTL----------------LEKKEAVAKLNEELKLSEIM---I 1069
+ ++ EE ++K NL L L+++ A +K E K + I+
Sbjct: 1045 EKQLSEADTEERNIKFNLDLRSLNKELVQIEESIESLDRQNATSKRQEFQKETAILRESY 1104
Query: 1070 SDLTKYHHTLENCVIKYHSQKMRSINRLIR--------EYWTRIYQLKLSEIMISDLTKY 1121
S L+ H + V + Q ++SI I+ EY+ +L+ + +D++ Y
Sbjct: 1105 SRLSSAHSSKMGEVSQLQKQ-IQSITEEIKRDYEHVEDEYYQEYLKLQTKMFISNDISVY 1163
Query: 1122 HHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVV 1181
L+N V+KYHS KM INR+I E W R Y G D+D I I +D+ T + R+YNYRVV
Sbjct: 1164 SKGLDNAVMKYHSIKMEEINRIIDELWKRTYSGTDVDTIMIKSDMNTQVKGNRSYNYRVV 1223
Query: 1182 QKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------------------- 1213
K +E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1224 MMKEDVELDMRGRCSAGQKVLASIIIRLALAECFGVGCGMIALDEPTTNLDEENIESLAK 1283
Query: 1214 -----------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
QKNFQLIVITHDE F+ ++ A + + RI R+ +
Sbjct: 1284 ALNSIIHLRMSQKNFQLIVITHDEHFLRHMNATEFCDHFFRISRNER 1330
>gi|406865047|gb|EKD18090.1| DNA repair protein rad50 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1374
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 179/702 (25%), Positives = 294/702 (41%), Gaps = 128/702 (18%)
Query: 685 STQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQ 744
S + +++ +I +++ C LC R F + KLK I ++ ++ ++ ++
Sbjct: 732 SLKQMYDKFIETIDQKNC-CRLCEREFANQTQRAHASTKLKKMIADLDKEVLKEELEANE 790
Query: 745 LCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTK 804
K + + +P+Y+ KLQD +IP+L + + LE GE E
Sbjct: 791 --KAFKVAEPARPLYDVCKKLQDIEIPALNNDIKRLE-------GEKATRVATCERHDRL 841
Query: 805 EKTALSLQGDLTLLDQNIRELNTLQRELERQESKI---------SGMRSTGVDLDQVLAQ 855
S + D+ + + ++ E+ + E++I SG T DL + +A
Sbjct: 842 VYDEESAKRDMEGFAKAVSDITKYNNEIFKHENEITKLSSQDMLSGSSLTIDDLGEQIAA 901
Query: 856 QKEKKNELNTFRSKIES-GQTRLNSHNEKLQ----------SLQKQKNDIHSKQLTVQGG 904
EK + + KIE + NS NE + L + +N + KQ +
Sbjct: 902 CNEK---IRALKPKIEKLVNDKENSRNEIIDLERRLGAATTELDRAQNALEKKQDIISAI 958
Query: 905 AGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEE 964
+ + +K + D+ ELE L E A+ + + +K K NE
Sbjct: 959 DEFREYINQQKATVSKADA----ELESL-------EPDFAKARRQHEDVKLRGDTKANEI 1007
Query: 965 GAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERT 1024
A + + K ++ EI Y + G +L A +++L +E I + +
Sbjct: 1008 QAAKDKVASTVNKFKIVEDEINGYIENGGPDKLKACTREIKRLKDEQETIEKEIAAIVQE 1067
Query: 1025 INEINQSIANQSLEEIDLKNNLTLLEKK---EAV-----------AKLNEELKLSEIMIS 1070
IN++ IA+ + D+++N+ + + EAV A E+ L E S
Sbjct: 1068 INKLKDRIADSDKTKKDIQDNIRYRKARRELEAVRTEIAELETHNADEEYEMYLREYNRS 1127
Query: 1071 DLTKYHHTLENCVIKYH-SQKMRSINRLIREYWTRI-----------YQLKLSEIMISDL 1118
+ + T E I + K + + + +Y T +++ ++ I D+
Sbjct: 1128 EKRRELKTAERGPITGTITAKDEDLGKTMEDYETDYKSAAEDYRKAHIEVETTKAAIDDM 1187
Query: 1119 TKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRT 1175
K L++ ++++HS KM IN + E W YQG D+D I + +D V T + RR
Sbjct: 1188 VKCTKALDSAILQFHSVKMEEINSIAGELWRATYQGTDVDTIMVRSDNENVSTTT-TRRN 1246
Query: 1176 YNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAI 1235
+NYRVV K E DMR RCSAGQ+VLAC+IIRL
Sbjct: 1247 FNYRVVMVKQDAEMDMRGRCSAGQKVLACIIIRL-------------------------- 1280
Query: 1236 DRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------------IKNASDQKNF 1281
ALAE F NCG+ ALDEPTTNLD I+ Q NF
Sbjct: 1281 -------------ALAECFGVNCGVIALDEPTTNLDEDNIRALAGSLHKIIEQRRHQPNF 1327
Query: 1282 QLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDIHLRSL 1322
QLI+ITHDEEF++ + D R+ R+ S I ++SL
Sbjct: 1328 QLIIITHDEEFLKEMKCNDFTDSYYRVSRNAAQKSVIEVQSL 1369
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 114/217 (52%), Gaps = 31/217 (14%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A + L I G+R+F ++FQ PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 60 ASISNLSIRGVRSFDNQDKMSLKFQTPLTLIVGINGSGKTTIIECLKYATTGELPPNTKN 119
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLL 121
G FVHDP++ IG+K E A VKL V RS+ L
Sbjct: 120 GA-FVHDPKL-------------------IGEK-EVLAQVKLGFRNGVQSEYVVSRSMSL 158
Query: 122 SNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI-----GVSKAILNNVI 176
+ + T ++ + K +G + ++ S + CN I GVS AIL NVI
Sbjct: 159 TVQKTTQKFKTLESNLMMKSKRSGERISIS-----STVADCNAIVPQQLGVSSAILENVI 213
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
FCHQ+ S WP+ E K+K FDEIF+A KY KA+E+I
Sbjct: 214 FCHQDESLWPMLEPSKLKLKFDEIFEAQKYTKAIENI 250
>gi|385302347|gb|EIF46483.1| dna repair protein rad50 [Dekkera bruxellensis AWRI1499]
Length = 409
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 120/233 (51%), Gaps = 62/233 (26%)
Query: 1107 QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV 1166
Q KL+ +++DL + ++ V+K+H +KM INR+I E W Y GND++ I I AD
Sbjct: 210 QTKLA--LVTDLGTCYKATDDGVMKFHHEKMAEINRIIDELWKGTYMGNDVESIMIRADP 267
Query: 1167 GTGSEK------RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLI 1220
G + RR+YNYRVV KNG+E DMR RCSAGQ+VLA +IIRL
Sbjct: 268 GASKSRXGTLKTRRSYNYRVVMVKNGVELDMRGRCSAGQKVLASIIIRL----------- 316
Query: 1221 VITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA----- 1275
ALAE F N G+ LDEPTTNLD +N
Sbjct: 317 ----------------------------ALAECFGLNFGMITLDEPTTNLDEENIESLAK 348
Query: 1276 ---------SDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDIH 1318
S Q NFQLIVITHDE+F+ + A++ + ++VRD + S I+
Sbjct: 349 ALNKIIEMRSVQSNFQLIVITHDEKFLRYMNAVEFTDHYFKVVRDERLHSTIN 401
>gi|254567069|ref|XP_002490645.1| DNA repair protein RAD50 [Komagataella pastoris GS115]
gi|238030441|emb|CAY68365.1| DNA repair protein RAD50 [Komagataella pastoris GS115]
Length = 1323
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 219/887 (24%), Positives = 388/887 (43%), Gaps = 170/887 (19%)
Query: 486 NEVNQSQSTLQVLQTKLNRVNS----------EIDQLSKSLDPDQLKNEIEAWIRQRNEL 535
N++N + Q LQ +N +NS +I++L+K L+ + +N++ + +
Sbjct: 471 NDINSLKKRNQALQKSINDINSNESEFNETKEDIERLTKQLEDLRSENKLASINNDLKQN 530
Query: 536 EDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPE-- 593
+D++ V++ E+ + Q IT NR+ LA ++LLKE + + ++
Sbjct: 531 QDKILVLENELDQINKQIIT-------SNRQGEVLAKLHLLKENTKKGNSSISKLVESYG 583
Query: 594 ENFKNSLDKALSS-----ITFDI-NRIQEDINAKEKHLYTLEANVSNSS-------KTLR 640
E FK + L+ + ++ + QED + K K + + + N S+ K L
Sbjct: 584 EQFKEFTGEDLNPEDCLPVFLEVLKKRQEDTDLKRKEVASFKQNEYESNHDRSLLEKKLE 643
Query: 641 DQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQE---EVSMMTSTQYLFNSYIGKL 697
+ L E R+ +L +P E E + + +L+ + E + S + FN K+
Sbjct: 644 QSRSQLQECRSRIVSILEDEPIE-EYESIVKDLESDYEIALQNSKLNWATKNFNETALKI 702
Query: 698 EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKP 757
+ C LC R D P +V I E E+ N D L +++ +K
Sbjct: 703 AKEHQYCILCKRELNHDELGPVMVT-----ISENIEKAN------DDLYSKEKD--RIKQ 749
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALS-LQGDLT 816
+++ ++D DI + R+ LE ++ EL +LKT + + + L L+ DL
Sbjct: 750 DLDDLKSIRD-DISNFRN----LEGSIASANDELNELKTFVSDDLARVSSELEQLESDLV 804
Query: 817 LLD---QNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTF---RSKI 870
L+ +++ E++ LQ DL + K ++EL+ + +
Sbjct: 805 SLESLRKHVVEISKLQE-----------------DLSHYYVENKSIESELSAYGVPAKTL 847
Query: 871 ESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKS-LEDR-------------KC 916
Q LN N +L+ L++Q +D+ ++ ML+ ++D+ K
Sbjct: 848 SELQEDLNGKNFQLKELRRQADDLKEQREFSNRELSMLEGNVKDKRLLISNFEKSLMIKL 907
Query: 917 ELE-GMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEG----AKIQDY 971
LE G+D + ++EL + + + L + L+ LK ++ K L EE ++Q
Sbjct: 908 NLEKGIDE-NKARIDELQQTGETVLESMKLTKDRLNKLK-DNVKTLEEERDSTLTQLQSN 965
Query: 972 TKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCER---TINEI 1028
+Q + V+ + + ++ + L LR+ + K I G + +N +
Sbjct: 966 VEQFKTVQDSLVRLNSFVNKYELEDEPILRQCEKNSEHLKASIKDAEGQLNKLHEKVNVL 1025
Query: 1029 NQSIANQSLEEIDLKNNLTL----------------LEKKEAVAKLNEELKLSEIM---I 1069
+ ++ EE ++K NL L L+++ A +K E K + I+
Sbjct: 1026 EKQLSEADTEERNIKFNLDLRSLNKELVQIEESIESLDRQNATSKRQEFQKETAILRESY 1085
Query: 1070 SDLTKYHHTLENCVIKYHSQKMRSINRLIR--------EYWTRIYQLKLSEIMISDLTKY 1121
S L+ H + V + Q ++SI I+ EY+ +L+ + +D++ Y
Sbjct: 1086 SRLSSAHSSKMGEVSQLQKQ-IQSITEEIKRDYEHVEDEYYQEYLKLQTKMFISNDISVY 1144
Query: 1122 HHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVV 1181
L+N V+KYHS KM INR+I E W R Y G D+D I I +D+ T + R+YNYRVV
Sbjct: 1145 SKGLDNAVMKYHSIKMEEINRIIDELWKRTYSGTDVDTIMIKSDMNTQVKGNRSYNYRVV 1204
Query: 1182 QKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------------------- 1213
K +E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1205 MMKEDVELDMRGRCSAGQKVLASIIIRLALAECFGVGCGMIALDEPTTNLDEENIESLAK 1264
Query: 1214 -----------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
QKNFQLIVITHDE F+ ++ A + + RI R+ +
Sbjct: 1265 ALNSIIHLRMSQKNFQLIVITHDEHFLRHMNATEFCDHFFRISRNER 1311
>gi|340059044|emb|CCC53415.1| RAD50 DNA repair-like protein, (fragment) [Trypanosoma vivax Y486]
Length = 1315
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 188/763 (24%), Positives = 338/763 (44%), Gaps = 111/763 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVR--FQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M ++Q+ I G+R+F D N R F++PLT+IVG+NG GKTTIIE + A T + P G
Sbjct: 1 MTSIEQIEISGVRSFDPDPNHRQRIIFKKPLTVIVGKNGAGKTTIIEALLNACTGQMPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ K+ +FV+DP++ + + A ++L T + V+RS
Sbjct: 61 SGIEKS-------------------SFVYDPKVMGETDVKAQIRLLFTGRGGKLIQVIRS 101
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNVI 176
K +T D ++ + AT QK + + + ++ + +++GVS A+L +VI
Sbjct: 102 FQAVRSRNKTTFSTLDNIVAFEDAAT--QKVVSSAYRANDVDRAIPDMLGVSAAVLEHVI 159
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQE+ +WPL K VK+IFDEIF AT+Y AL+ ++ LR++ E +A + A
Sbjct: 160 FCHQEDGNWPLSPPKDVKKIFDEIFAATRYVLALDRLRENSKELRRQQKEHEASFMALSE 219
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKL---VQ-LTEKERNMSVMSTQ 292
+ +A Q + N+ ++ S + + + ++M+P +L VQ LT +R+ +S
Sbjct: 220 HLVQA----QQLQNDINTKENSIQVIRDKFKAMEPEQSQLRAVVQALTAVQRDAEDLS-- 273
Query: 293 YQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQ 352
E MIQ +E S+ +L G E +L + E+ L+ + + +
Sbjct: 274 -----REAAMIQGQIHEKSQSLDRLNIGAVDETLEELVQRRNRCGERVQTLKKEVQSAAT 328
Query: 353 YIQEEKQSHTHINEAQMKL----GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQ 408
++E + + + L G E+ + HK+ +L ++ L LD + +
Sbjct: 329 LLEEAEADARRYDRSVFHLRSTIGVFEQQAQEHKQCC----LELQDIVKKLSLDVSVEWD 384
Query: 409 YTPEEGEGLIKMSQTTIDKYL--------SDIKILERTFSDNENTKQAEINALIVEKVEL 460
E+ + + ID+ L + K++E + E ++A ++ + E
Sbjct: 385 QLDEQS---LTCASACIDRELRKETEELDAATKLIEEKVASLEERQRALFRSMDSDNREK 441
Query: 461 ESKIKSFKQQIEGNKKDLTNVITQINEV--NQSQSTLQVLQTKLNRVNSEIDQ---LSKS 515
E K ++Q+ ++ L+ + E+ + + LQ LQ + + ++ L KS
Sbjct: 442 EMK----QEQLSRLEQRLSEAERTLFELRPHAKPAQLQALQVTIKELEDRVEASEVLRKS 497
Query: 516 LDPDQLKNEIEAWIRQRN----ELEDELCV------IDAEISILQAQNITLAEIKSLKNR 565
D + + EI+ I +N EL EL ++AE+++L+ Q I + +
Sbjct: 498 GDDYKQRQEIQQCIAAQNNLVVELRQELARRRRHSNLEAEMNLLRGQ------IATKQEN 551
Query: 566 KESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFD-----------INRI 614
ES L D +L + E + D +LS T I +
Sbjct: 552 LESGLRD-------------MLIAGLMEFDCGTEADMSLSCATLKVEHLRQKKADAIRAV 598
Query: 615 QEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELK 674
+ D +A E+ + TLE S + + + L R VLG D + V +
Sbjct: 599 RADRSALERQIMTLEQKRSQLLEDIMKESTELERKRVRCVEVLGDLEQLDNFEGVLASAR 658
Query: 675 REQEEVSMMTSTQYLFN---SYIGKLEENEPRCPLCTRFFESD 714
VS +S ++ S++ ++ +CPLC R FES+
Sbjct: 659 EVLRSVSQQSSARHAMTACYSHLVEMANASGKCPLCDRSFESE 701
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 58/230 (25%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y T +++ +E+ ++D+ KY+ LE V YH +K+ IN ++ W Y+G+DID I
Sbjct: 1111 YRTTFIKVQTTEVAVADVEKYYRALEKAVQTYHQEKIAQINEILAGLWRLTYKGSDIDTI 1170
Query: 1161 SI-AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
+ + D T + RR+Y+YRVV K+ E DMR RCSAGQ+VLA ++IRL
Sbjct: 1171 ELRSEDDATSTTVRRSYSYRVVMKRGNSEMDMRGRCSAGQKVLASVLIRL---------- 1220
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD-------- 1271
AL+E F +CGI ALDEPTTNLD
Sbjct: 1221 -----------------------------ALSEAFCCDCGILALDEPTTNLDEDNARSLA 1251
Query: 1272 ------IKNASDQKNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKG 1313
I N K+FQLI+ITHDE F+ L A+D Y VR +D +G
Sbjct: 1252 ESLRQLIVNRRSVKHFQLIIITHDEHFVRALGGQALDTYYFVR--KDREG 1299
>gi|401407546|ref|XP_003883222.1| putative DNA repair protein RAD50 [Neospora caninum Liverpool]
gi|325117638|emb|CBZ53190.1| putative DNA repair protein RAD50 [Neospora caninum Liverpool]
Length = 1584
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 25/222 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA L++L + GIR F D V+ F++PLT+IVG NG GKTT++EC+K+A T E P
Sbjct: 1 MATLERLGVQGIRCFAPDHLEVLAFEKPLTVIVGHNGAGKTTVVECLKYATTGELPPCVD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ ++HDPR+ D A E V+L+ + + VVRS+
Sbjct: 61 RGRGWLHDPRL--LDAA------------------EVKGQVRLRLHTKGGKELTVVRSMQ 100
Query: 121 LS---NKNGKDNCATR--DTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
LS ++ GK + + + K +TG + ++G + +++ L+G+ +A+L +V
Sbjct: 101 LSQTVDRKGKSKATFKQLEPYLQLKDSSTGQKASIGNKCADIDVQLPGLLGIHRAVLEHV 160
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
+FCHQE S WPL E + +K+ FD++F AT+Y KALE I+ R
Sbjct: 161 VFCHQEESCWPLSEMQVLKKKFDQLFGATRYVKALECIRTIR 202
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 107/214 (50%), Gaps = 42/214 (19%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y + + ++ ++ SDL +YH L+ ++KYHS KM+ IN ++E W +Y G+DID+I
Sbjct: 1367 YRSALVDAEIEAMVTSDLDRYHRALDKALMKYHSMKMQEINATMKELWQTMYTGHDIDFI 1426
Query: 1161 SIAADV------------GTGSEK-----RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLA 1203
+I +D G S +R+YNYRVV K +E DMR RCSAGQ++LA
Sbjct: 1427 AIRSDTEDQAGLAPLSLFGNASSPPPAAGQRSYNYRVVMVKGAVELDMRGRCSAGQKILA 1486
Query: 1204 CLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL 1263
LIIRL +++ V+ D E T +DR + + AL E +
Sbjct: 1487 SLIIRLALAETFCVHCGVLALD----EPTTNLDRYNCESLAKALAALVEARRTSA----- 1537
Query: 1264 DEPTTNLDIKNASDQKNFQLIVITHDEEFIENLT 1297
+FQLI+ITHDE+F+ L
Sbjct: 1538 ----------------SFQLILITHDEQFVMKLA 1555
>gi|340370828|ref|XP_003383948.1| PREDICTED: DNA repair protein RAD50-like [Amphimedon queenslandica]
Length = 381
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 110/206 (53%), Gaps = 56/206 (27%)
Query: 1108 LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAAD-- 1165
LK +++ I DL KY+ L+ ++++H+ KM IN++I+E W + Y+G DID I I +D
Sbjct: 181 LKTTDLAIKDLDKYYKALDRAIMRFHTIKMDEINKIIKELWMKTYKGGDIDTIEIRSDDD 240
Query: 1166 -VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITH 1224
G+ S R+ YNYRVV K DMR RCSAGQ+VLA +IIRL
Sbjct: 241 PEGSSSTGRKVYNYRVVMVKGDNTLDMRGRCSAGQKVLASIIIRL--------------- 285
Query: 1225 DEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA-------SD 1277
ALAETF NCG+ ALDEPTTNLD N SD
Sbjct: 286 ------------------------ALAETFCINCGLLALDEPTTNLDCDNIEGLAVALSD 321
Query: 1278 -------QKNFQLIVITHDEEFIENL 1296
QKNFQLI+ITHD +F+E +
Sbjct: 322 IIRERQHQKNFQLIIITHDLKFVEQI 347
>gi|302924127|ref|XP_003053819.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734760|gb|EEU48106.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1955
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 48/382 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L I G+R+F ++F PLTLIVG NG GKTTIIEC+K+A T E P +
Sbjct: 1 MSKIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP++ + E A VKLQ N+ RS+
Sbjct: 61 GGA---------------------FIHDPKLCGEKEVMAQVKLQFRSINDRQHVATRSIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCH 179
L+ K + T D ++ + ++ + + EM +GVS AIL+ VIFCH
Sbjct: 100 LTVKKTTRSQKTLDCSL---VVVNNGERTTTSTRTAQLDEMIPERLGVSPAILDAVIFCH 156
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK---AHYQATLN 236
Q+ S WPL E +K+ FDEIF+A KY KA++++K+ R + +++ +++ AH + +
Sbjct: 157 QDESLWPLSEPAALKKRFDEIFEAMKYTKAIDNLKVLRKKQVEQLGKLQNDEAHNKVNKD 216
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
A+ + + + + E +I M E + ++ E + + TK
Sbjct: 217 RGDRAEKRMNALQEDIEGARAKCE---SISTEMDNTQEIIREIRETANSHLAIVQNLNTK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
+ + + +E+ EL+++I +L D A L+S L + ++R+ Q++QE
Sbjct: 274 REQLEYREEAVKELKATIDEL-PEDDARLESDLAHY-------------EDRM--QHLQE 317
Query: 357 EK-QSHTHINEAQMKLGKLERD 377
E Q+ T NE Q +L + +D
Sbjct: 318 EADQNKTQYNELQNELARSRKD 339
>gi|365758744|gb|EHN00571.1| Rad50p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1282
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 156/654 (23%), Positives = 296/654 (45%), Gaps = 98/654 (14%)
Query: 662 FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLV 721
+ D L+ L K E + M +T FN ++ E + C LC+R FE+D L+
Sbjct: 616 YSDVLEESELSYKTALENLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENDSFKSKLL 674
Query: 722 NKLKTKI-----KEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSK 776
+LK K K + + N+K ++D L + + L + E I + R
Sbjct: 675 QELKIKTDANFEKSLKDTVQNEKEYLDSLRLLDKHIISLSSINEKI--------NNSREH 726
Query: 777 LIELEENVIETKGELKKLKTALETPKTKEKTALS----LQGDLTLLDQNIRELNTLQREL 832
L + E +K +L +L+T T + +++ A S L T +++ I++L + +
Sbjct: 727 LEKANEETKSSKLKLYELETKSTTLRNEKEFAESDIRPLIERFTYVEKEIKDLENNSKSI 786
Query: 833 ERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNS---HNEKLQSLQK 889
+ S S +D++ QQ++ + L R I Q + + ++ SL K
Sbjct: 787 SDELSIYSSSGDGIQTVDELRDQQRKMNDSLRQLRKHILGIQMEKDEKVKESSRIISLTK 846
Query: 890 QKN-DIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
+K + + ++ + S++ ++ ++ +DS +E L ++ ++ + + +++
Sbjct: 847 EKELKVSEIESSLTQKQNIDNSIKSKEVNIKDIDS----RVEALESRIVSLQNKRDESKN 902
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
LD LK E +++ + + D + ++ + I E++++ +G L+ +V++L
Sbjct: 903 VLDQLKNERDLQISNKQKNVADVNRLIDRYQTIYKEVIDFESKG----FNELQTTVKELG 958
Query: 1009 QRKEDIIAKRGVCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLS 1065
K + + + +NE+N+ +A+ + EE +L+ NL L+ K + E+
Sbjct: 959 SNKVQMQEVKEQLDVKMNEVNEEKRKLADSNNEEKNLRQNLELIGLKSQFQNIESEINKL 1018
Query: 1066 EIMISDLTKYHHTLENCVIKYHSQKMRSINR--------------------------LIR 1099
++ ++ + + E+ ++ + +K+ S N + +
Sbjct: 1019 DVQNAEAERDKYQEESLRLRTNFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEK 1078
Query: 1100 EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
Y +L+ + D+ Y L++ ++KYH KM+ INR+I E W R Y G DID
Sbjct: 1079 NYHKEWVELQTRSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDT 1138
Query: 1160 ISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------ 1213
I I +D + + K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1139 IKIRSDEVSSTVKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANC 1198
Query: 1214 ---------------------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1199 GVIALDEPTTNLDEENIESLAKSLHNIINMRKHQKNFQLIVITHDEKFLSHMNA 1252
>gi|398409066|ref|XP_003855998.1| putative RAD50 [Zymoseptoria tritici IPO323]
gi|339475883|gb|EGP90974.1| putative RAD50 [Zymoseptoria tritici IPO323]
Length = 1303
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 156/338 (46%), Gaps = 73/338 (21%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I+G+R+F K + F PLTLIVG NG GKTTIIEC+K+A T P G
Sbjct: 1 MSKIEKLSILGVRSFDHRKAMSIEFHAPLTLIVGMNGSGKTTIIECLKYATTGIMPPG-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP + + E A +K+ T N + R+L
Sbjct: 59 -------------------SKGAAFIHDPAMAGEKEVMAQIKISFTSTENMKMVCTRNLQ 99
Query: 121 LSNKNGK--DNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ K T D TI + G + + E M +GVS+A+L +VIFC
Sbjct: 100 LTVTKTKPAGTFKTLDATIVMR--KAGERNVISSRVAEIDTMMPRFLGVSRAVLESVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKI----------------------- 215
HQE S WP+ K +KE FD+IF+A KY KA+++IKI
Sbjct: 158 HQEESLWPMSSPKDLKEKFDQIFEALKYTKAIDNIKILQKNKKIELVQLKANEEIAKANN 217
Query: 216 ---------------QRDRLRKEIPEI-----KAHYQATLNYKKEADSKKQLIYNNTQKR 255
Q D +R ++ E +A +A+ +KK ++ +LI Q R
Sbjct: 218 DKAIKLQKKLQTLTDQSDAMRDQVKEYGVQQREAQSRASEYFKKAGEN--ELIVGKLQGR 275
Query: 256 DQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
E EES++ + E +V++T+ ++ + M QY
Sbjct: 276 RI---EKQTKEESVRSLRENIVEMTDSDQQLETMLQQY 310
>gi|147834715|emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]
Length = 244
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 120/215 (55%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F +HDP++ + ET +KL+ T D VC +RS
Sbjct: 61 SGHSF--------------------IHDPKVAGETETKGQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKA+L NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q++++WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDDANWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
>gi|154340261|ref|XP_001566087.1| RAD50 DNA repair-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063406|emb|CAM39585.1| RAD50 DNA repair-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1361
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 178/717 (24%), Positives = 307/717 (42%), Gaps = 173/717 (24%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIM 763
C +C R FES+ ++ + + K ++T DQL + ++ + + YE
Sbjct: 696 CAVCERSFESEDALERFLTRNAAK----------QRTSPDQLAAVEAAVTKAQATYEGFE 745
Query: 764 KLQDT---------DIPSLRSKLIELEENVIETKGELKKLKTALETPK---------TKE 805
KLQ+ IP L ++L LEE V + + E +K+ A + + +
Sbjct: 746 KLQNVVATVRRNLPRIPDLEAELEALEERVKKNRAEQRKVSAARDASQHVVHQLDIVFQH 805
Query: 806 KTALSLQGDLTL-----LDQNIRELNTLQRELERQESKISGMRSTG-------------- 846
+ G+ T+ L + ++ Q E +RQ +I M+ +G
Sbjct: 806 LCRVCTMGEKTVALRDTLRRKEKDAEAAQAEQQRQ-PQIRRMQGSGDGAAERVQLPQRSF 864
Query: 847 VDLDQVLAQQKEKKNELN---TFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQG 903
+L + A E+ ++LN ++E GQ H + LQ++K + ++ V
Sbjct: 865 EELSEAYAASTERLHQLNRQFAEAQRMECGQDENAVHRQ----LQERKAALFQAEVAV-- 918
Query: 904 GAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNE 963
L+ LE EL+ ++T LEEL + + + + Q + L+ E +K
Sbjct: 919 --AKLEDLETVARELQEEAVQHRTRLEELKVQATEAQRSVEVHQRRVLQLRTELQKAEAA 976
Query: 964 EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALR------ESVQKLNQRKEDIIAK 1017
E + +QL +++ +L+Y + G +L LR ES + ++E+ +A
Sbjct: 977 ERGALDTAEQQLRQLQLSLPAVLSYVQNGCNQRLEGLRGHLRETESAYEAATQEEEELAS 1036
Query: 1018 RGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDL-TKYH 1076
R INE ++++Q D+ + +L++ ++A L +E ++ L +
Sbjct: 1037 R------INEARTTLSDQHRRSADMDRQIDVLQQAVSIAADEARLTETERTLASLKSDRL 1090
Query: 1077 HTLENCVIKYHSQ-KMRSINRLI------------------------------------- 1098
H +E + + Q + ++ +I
Sbjct: 1091 HDVEQLLGEEAGQASLAALREMITAKITSLEKIRAQQDGNTEAMLLDVSQLKQQLRGDKY 1150
Query: 1099 ----REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQG 1154
+ Y + +++ +EI I D+ KY+ LE V YH +K+ IN++I E W + Y+G
Sbjct: 1151 QNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKITQINQIIAELWRQTYRG 1210
Query: 1155 NDIDYISIAADVGTGSEK--RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFIS 1212
+DID + I ++ + RR+YNYRVV K+ E DMR RCSAGQ+VLA +IIRL
Sbjct: 1211 SDIDTVEIRSETEGTTTTAARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLASIIIRL--- 1267
Query: 1213 DQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDI 1272
AL+E F +CGI ALDEPTTNLD
Sbjct: 1268 ------------------------------------ALSEAFCCDCGILALDEPTTNLDD 1291
Query: 1273 KNA---SDQ-----------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKG 1313
NA +D K+FQL+VITHDE+F+ L ++++ Y V +D +G
Sbjct: 1292 DNARSLADALRTLIEVRRAVKHFQLVVITHDEQFVRALGGQSLEKFYYVH--KDREG 1346
>gi|294656912|ref|XP_002770330.1| DEHA2D17314p [Debaryomyces hansenii CBS767]
gi|199431834|emb|CAR65684.1| DEHA2D17314p [Debaryomyces hansenii CBS767]
Length = 1309
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 197/757 (26%), Positives = 343/757 (45%), Gaps = 157/757 (20%)
Query: 600 LDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGS 659
L K +SS + ++ + Q ++ K K +L A + ++S+T++ + + + +R +
Sbjct: 582 LTKYISSNSDEVEKEQVVVSTKSKKFDSLNALLDSNSETMKSYEERIGKYKER----ILK 637
Query: 660 KPFEDELDRVTLELKREQEEV--------SMMTSTQYLFNSY-IGKLEENEPRCPLCTRF 710
+ EDE+D+ L+ +E+ + S Q+ + I K +E+ C LC R
Sbjct: 638 EITEDEIDQYEQILEDLEEDFRDTSEALNTFEVSRQFKIKAIEIAKKDEH---CTLCLRS 694
Query: 711 FESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ----QRSLQELKPVYENIMKLQ 766
F+S PGL N + Q + KK ++++L K ++ L+ K + ++++ +
Sbjct: 695 FDS----PGLKNFVSLL------QDDVKKMNVEELTKNVEIAKKELESTKAINSDVLQYR 744
Query: 767 DTDIPSLRSKLIELEENVIETKGELKKLKTALETP-------KTKEKTALSLQGDLTLLD 819
L S++ +L+ ++ +TK + K ET K+ SL+ + +
Sbjct: 745 -----KLSSEVTDLKSHIDKTKSDTLNAKEDFETGLNRLGNLKSNMDALNSLKNPIYDIV 799
Query: 820 QNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNS 879
+ ++N R++E + ++S + LD++ Q+ K E+ R +I N
Sbjct: 800 RIKNDINDSNRQIEALKDELSEYGVSKTPLDELQQLQQSKNMEIKDLRIQI-------NE 852
Query: 880 HNE----KLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRK 935
NE K + L + +N+I KQL + + M +S D K E +D + + EL +K
Sbjct: 853 INELKFTKQKELARLENNIKDKQLAI---SNMERSFVDLKNLRESIDE-NEKHINELNKK 908
Query: 936 VAPIETQL-------NLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNY 988
I+ L N+ Q EL K +KK +E + + ++E++ L + N
Sbjct: 909 STDIKNVLDEFHDKQNVHQEELRKTKDSNKKIREKEVSNVD----KIEKIVSNFLSLYNA 964
Query: 989 TKRGTLTQLAALRESVQKLNQRKEDIIAKRGV-------------CERTINEINQSIAN- 1034
TK +L L+E K+ R+ + + K GV E++INE + +N
Sbjct: 965 TKSFLKIELPKLKEVETKI--RETESVTK-GVEIEISESESHIKRLEKSINESSNFKSNI 1021
Query: 1035 ----------QSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI 1084
+ LE ID N + L+ A AK +E + S+ + + LTK + V
Sbjct: 1022 RDNLEYRNVQKELEGID--NQVHSLDISNAQAKKDEYQETSKNLRNILTKLNADYAGKVG 1079
Query: 1085 KYH-------------SQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIK 1131
+ S + ++I+R E W + L+ + ++ +D+ Y L+N ++K
Sbjct: 1080 EVRQMKDQISSLQNELSNEYKNIDRTYHEEWIK---LQTNMLVSNDIQTYSKALDNAIMK 1136
Query: 1132 YHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDM 1191
YHS KM INR++ E W + Y+G D+D ISI +DV ++ R+YNYRVV K E DM
Sbjct: 1137 YHSMKMEDINRILGELWRQTYKGTDVDTISIKSDVNVQAKGNRSYNYRVVMYKQDSELDM 1196
Query: 1192 RNRCSAGQRVLACLIIRL---------------------------------------FIS 1212
R RCSAGQ+VL ++IRL F
Sbjct: 1197 RGRCSAGQKVLTSILIRLALAECFGANCGIIALDEPTTNLDSENTESLAQALNKIIEFRK 1256
Query: 1213 DQKNFQLIVITHDEEFIENLTA---IDRAYVVRIVRD 1246
+QKNFQLIVITHDE+F+ ++ D Y R+ RD
Sbjct: 1257 NQKNFQLIVITHDEKFLSHINGDNFTDHFY--RVQRD 1291
>gi|365988260|ref|XP_003670961.1| hypothetical protein NDAI_0F04000 [Naumovozyma dairenensis CBS 421]
gi|343769732|emb|CCD25718.1| hypothetical protein NDAI_0F04000 [Naumovozyma dairenensis CBS 421]
Length = 1305
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 183/752 (24%), Positives = 320/752 (42%), Gaps = 171/752 (22%)
Query: 617 DINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKRE 676
DI++ K +SN+ + L+ K T E+ R+E L DE + V +E
Sbjct: 590 DIHSSNKEYTESSIRLSNTQRELKKLKSTEEEITKRLEESLPEDCPIDEYNDVVVEA--- 646
Query: 677 QEEVSMMTSTQYL--------FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKI 728
E+S T+ + L FN ++ + + C LC R FE+D ++ +L+ K
Sbjct: 647 --ELSYKTALENLKMHQTTLDFNRKALEIADRDNCCYLCARKFETDDFRGKILQQLRAKT 704
Query: 729 KE-----IPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEEN 783
+ E +K ++D L +R L + D SL S++ E E++
Sbjct: 705 DANFENTLKETVKEEKEYLDGLRALERDFLSLTTCKD--------DYKSLTSRVDEYEKD 756
Query: 784 VIETKGELKKLKTALETPKTKEKTA-----------LSLQGDLTLLDQNIRELNTLQREL 832
V K + + + E K+ A + L+ ++ L++N++++
Sbjct: 757 VSRLKNKFDEFELKGENLKSDRDYAERILRAICEEIVYLRKEVKSLEKNVQDV------- 809
Query: 833 ERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKN 892
+E +I G GV + L+ Q+++KN L R +L + LQ+ ++ K
Sbjct: 810 -AEELRIYGDSDGGVQTVEELSHQQQEKNAL--LR--------QLRKDVQDLQNERESKT 858
Query: 893 DIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT-------------ELEELGRKVAPI 939
HS LTV +++R ++ ++ Q E++ LG ++ +
Sbjct: 859 REHSALLTV---------IKERNLKVNEIERGLQRSENIKKDIIAKEHEVDTLGVRIQNL 909
Query: 940 ETQLNLAQSE-------LDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRG 992
E ++N+ E L+ + E+ +++ + I + + L+ +K ++ ++ +G
Sbjct: 910 EEEINVLLGEKEIAAKLLNETRLEYNEEIESQRGNIDNIKRYLDRFNDLKSDVDTFSTQG 969
Query: 993 TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEIN---QSIANQSLEEIDLKNNLTLL 1049
A L + KL + +ED+ E T +E+N + + + + E+ +L+ NL L+
Sbjct: 970 ----FAELEDCTVKLAKVQEDLEVAGKNIEETQDELNLHREKLKDSNNEKKNLEQNLRLI 1025
Query: 1050 EKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSI-NRLIRE-------- 1100
E L E LK +E+ +S L + E + S ++R++ RL E
Sbjct: 1026 E-------LQERLKETEVEVSGLNIQNAEAERDKYQQESSRLRNLFERLSAENAGKMGEV 1078
Query: 1101 ------------------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
Y +L+ + D+ Y L++ +++YH K
Sbjct: 1079 KQLQSQIEGLKHQLRSDYKDIDDKYHKNWVELQTRTFVTDDIETYSKALDSAIMRYHGLK 1138
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCS 1196
M+ INR+I E W R Y G DID I I +D T + ++YNYRVV K E DMR RCS
Sbjct: 1139 MQDINRIIDELWKRTYTGTDIDTIKIRSDEVTSGVRGKSYNYRVVMYKQDAELDMRGRCS 1198
Query: 1197 AGQRVLACLIIRLFISD---------------------------------------QKNF 1217
AGQ+VLA +IIRL +S+ QKNF
Sbjct: 1199 AGQKVLASIIIRLALSETFGTNCGVIALDEPTTNLDEENIESLAKALNNIIGLRRHQKNF 1258
Query: 1218 QLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
QLIVITHDE+F+ ++ A + RI RD +
Sbjct: 1259 QLIVITHDEKFLNHMNASQFTDHFFRIKRDDR 1290
>gi|320586122|gb|EFW98801.1| DNA repair protein rad50 [Grosmannia clavigera kw1407]
Length = 1301
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 116/243 (47%), Gaps = 62/243 (25%)
Query: 1087 HSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1146
+ Q+ R RE R+ K + I DL +Y L+ +++YH+ KM +NR+ E
Sbjct: 1088 YEQEYRDAELRYREAHIRVETTKAA---IEDLGRYAAALDKAIMEYHAFKMEEVNRIAGE 1144
Query: 1147 YWTRIYQGNDIDYISIAAD--VGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLAC 1204
W YQG DID I I +D TG RR+YNYRV K E DMR RCSAGQ+VLA
Sbjct: 1145 LWRATYQGTDIDTILIRSDNEAATG---RRSYNYRVCMVKQDTEMDMRGRCSAGQKVLAS 1201
Query: 1205 LIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALD 1264
++IRL ALAE+F +CG+ ALD
Sbjct: 1202 IVIRL---------------------------------------ALAESFGVSCGLIALD 1222
Query: 1265 EPTTNLD--------------IKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVR 1309
EPTTNLD I+ Q NFQLIVITHDE+F+ ++ D R+ R
Sbjct: 1223 EPTTNLDSDNIRSLAVSLHAIIRARQAQANFQLIVITHDEDFLRHMQCSDFCDTFYRVSR 1282
Query: 1310 DHK 1312
D K
Sbjct: 1283 DDK 1285
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 226/488 (46%), Gaps = 56/488 (11%)
Query: 42 TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIV 101
TIIE +K+A T E P S G F+HDP++ + E A V
Sbjct: 17 TIIETLKYATTGEQPPN---------------------SKGGAFIHDPKLCGEKEVLAQV 55
Query: 102 KLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEM 161
KL + V RSL L+ K + + T D ++ I+ G + L E +
Sbjct: 56 KLSFRSTVGQKLVVTRSLQLTMKKTQRSMKTLDGSLV--IYNNGERTGLSTKVGELDDLV 113
Query: 162 CNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLR 221
N +GVS AIL+ VIFCHQ+ S WP+ E +K+ FDEIF+A KY KA++++K+ R +
Sbjct: 114 PNYLGVSPAILDAVIFCHQDESLWPMSEPAALKKKFDEIFEAMKYTKAIDNLKVVRKKQG 173
Query: 222 KEIPEIKAHYQATLNYKKEAD-SKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+E+ ++K ++ + K++ ++K L TQ D E+ ++ M +
Sbjct: 174 EELQKLKILESSSKDAKEKGQRAEKHLAGLQTQIEDLR-EQGEDLTRQMDEVQGLAKSRR 232
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKC 340
E+ + + + ++K+ + ++ E+ EL+ SI ++ + L+ L ++ +L
Sbjct: 233 EEANSFFGIVQELKSKQDQYEVRNETVTELKDSIVKMRTESDEWLEEHLQQYEGSLARLQ 292
Query: 341 SELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLC 400
SE E + + E + + + Q + GK + D+E +++ L+T++ +
Sbjct: 293 SEKEAKTAEHRKLQSELSTARSTLGAKQAEQGKHQSDKEKYER---QLQTRVQ-----MV 344
Query: 401 LDTTAKSQYTPEEGEGLI-KMSQTTIDK----YLSDIKILERTFSDNENTKQAEINALIV 455
+ + + E E L QT +D+ + + LER D N K+ E + ++
Sbjct: 345 REAAERHEVRGYESEDLKDSQVQTFLDRIQKVWQDKRRDLERLQRD--NAKELEKDTAVI 402
Query: 456 ------------EKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQS--QSTLQVLQTK 501
++V + +I + +++ ++D+ NV ++E Q+ QST ++T+
Sbjct: 403 TELETRKAARTQDRVSAKQRIAAIDRRMAALQRDMQNV--DVDEGAQAILQSTYADVETR 460
Query: 502 LNRVNSEI 509
L + EI
Sbjct: 461 LRKTADEI 468
>gi|444314453|ref|XP_004177884.1| hypothetical protein TBLA_0A05720 [Tetrapisispora blattae CBS 6284]
gi|387510923|emb|CCH58365.1| hypothetical protein TBLA_0A05720 [Tetrapisispora blattae CBS 6284]
Length = 1307
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 208/806 (25%), Positives = 355/806 (44%), Gaps = 169/806 (20%)
Query: 592 PEENFKN---SLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAE 648
P+ NFK +L K + T D N++ K + N+ N+ + + +++++E
Sbjct: 570 PDLNFKKFYINLQKNIGLTTRDSNKLT-------KAVTEASLNLRNARQEYENYEKSISE 622
Query: 649 LMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYL--------FNSYIGKLEEN 700
+ ++E L ++ D + E+ E+S TS + L FN ++ +N
Sbjct: 623 ITKQLEETLPEDCTIEDYDELL-----EEAEISYRTSLENLKMHQTTLAFNKKALEVAQN 677
Query: 701 EPRCPLCTRFFESDYSVPGLVNKL--KTKIK---EIPEQTNNKKTHIDQLCKQQRSLQEL 755
+ C LC+R FE ++++L KT K + E N+K +++ L ++ + L
Sbjct: 678 DDCCYLCSRKFEDATFRSKILDELILKTDAKFEISLKETVENEKEYLEILRSLEKDILSL 737
Query: 756 KPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTA------- 808
K I K + DI +KL E EEN E K +L + +L K++ A
Sbjct: 738 K-----ISKTKYNDINISLTKL-ETEEN--EAKKKLDDFEKSLTDLKSERDYAENTIRPI 789
Query: 809 ----LSLQGDLTLLDQNIRELN--------------TLQRELERQESKISGMRSTGVDLD 850
L LQ ++ + ++ +++ T+ E Q K +++T +++
Sbjct: 790 IESKLRLQNEIKRSEHDVSQISDELMIYGTSSGNVQTVDELKENQRLKNEQLKNTRKEIN 849
Query: 851 QVLAQQKEKK-----NELNTFRS---KIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQ 902
L ++KE K N LN + KI+S + ++ L+ + K++ D + +L+++
Sbjct: 850 S-LQEEKETKTSEYSNLLNLIKDRTYKIDSIEKHISQKERILEDINKKEKDKQNIKLSME 908
Query: 903 GGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLN 962
LK+L++RK E E+ + E ++ Q EL++L + + K +
Sbjct: 909 KAKAALKNLKERKKATE----------EKSLSITSNNENKIKQMQDELNSLTR-YVDKFS 957
Query: 963 EEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCE 1022
+ +I +T +E+K E+ Y A L + ++ R D+ K+
Sbjct: 958 DLAKQISIFTSSKDEMKHCTDELREYQ--------AQLENLSKDIDIRSADLDRKK---- 1005
Query: 1023 RTINEINQSIAN--QSLEEIDLK----------NNLTLLEKKEAVAKLNEELKLSEIMIS 1070
+T+N+ N N Q++E ++L+ N L L + K +E +
Sbjct: 1006 QTLNDSNNERKNLKQNIELLNLQFDINTIRREINELNLQNAEAERDKYQQESARLRSLFE 1065
Query: 1071 DLTKYH-------HTLENCVIKYHSQKMRSINRLIRE-YWTRIYQLKLSEIMISDLTKYH 1122
L+ + L+N + SQ++R + + + Y T QLK + D+ Y
Sbjct: 1066 QLSAENAGKIGEMKQLQNQITTL-SQQLRVDYKHVNDKYHTEWVQLKTKLFVNDDIDTYS 1124
Query: 1123 HTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQ 1182
L+ ++KYHS KM IN I E W R Y G D+D I I +D ++K ++YNYRVV
Sbjct: 1125 LALDTAIMKYHSLKMEDINTTIDELWKRTYSGTDVDSIKIRSDEVKSTQKGKSYNYRVVM 1184
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVR 1242
K E DMR RCSAGQ+VLA +IIRL
Sbjct: 1185 YKQDAELDMRGRCSAGQKVLASIIIRL--------------------------------- 1211
Query: 1243 IVRDHKALAETFSRNCGIFALDEPTTNLDIKNAS--------------DQKNF-QLIVIT 1287
AL+ETF NCG+ ALDEPTTNLD +N +QK F LIVIT
Sbjct: 1212 ------ALSETFGINCGVIALDEPTTNLDEENIESLARSLHNIIQIRKNQKKFYTLIVIT 1265
Query: 1288 HDEEFIENLTAIDRA-YVVRIVRDHK 1312
HDE+F++++ A + +I RD +
Sbjct: 1266 HDEKFLKHMDAAQFTDHFFKIKRDAR 1291
>gi|260809256|ref|XP_002599422.1| hypothetical protein BRAFLDRAFT_287729 [Branchiostoma floridae]
gi|229284700|gb|EEN55434.1| hypothetical protein BRAFLDRAFT_287729 [Branchiostoma floridae]
Length = 187
Score = 145 bits (365), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 24/208 (11%)
Query: 1 MALLDQLHIMGIRNF-PADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ L ++ I GIR+F P DK++ V++F PLT+I G NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSSLVKMSIQGIRSFGPDDKDKQVIKFFNPLTIIQGHNGAGKTTIIECLKYMTTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G +FVHD P+I + E ++LQ N V V +S
Sbjct: 61 CARGGSFVHD--------------------PKIAHETEVKGQIRLQFRDVNGQLVSVQKS 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K K + T + I+R V + C + E EM +L+GVSKA+L NVIFC
Sbjct: 101 MMATQKVKKVDFKTMEGVITRDKHGQRVSLSSRCAEIER--EMISLLGVSKAVLTNVIFC 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKY 206
HQE+S+WPL EGK +K FDEIF AT++
Sbjct: 159 HQEDSNWPLSEGKTLKTKFDEIFSATRW 186
>gi|66362212|ref|XP_628070.1| RAD50 [Cryptosporidium parvum Iowa II]
gi|46227665|gb|EAK88600.1| RAD50 [Cryptosporidium parvum Iowa II]
Length = 1062
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 41/265 (15%)
Query: 1069 ISDLTKYHHTLENCVIKY--HSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLE 1126
IS LT + EN + K+ S+ SI L +Y + +++ + + + DL KYH +L+
Sbjct: 818 ISKLTGEFKSNENWLEKFTCDSKGYSSIEELSEKYLSGVFEQQTMSLCVKDLEKYHKSLQ 877
Query: 1127 NCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK-------------R 1173
++K+H KM INR I+E W Y+G+DIDYI+I +D E
Sbjct: 878 KALMKFHIDKMTEINRTIKELWNITYKGHDIDYIAIRSDAEDNEENFTVEKKSSRTPSGT 937
Query: 1174 RTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLT 1233
+++NYRVV +NG+E DM+ RCSAGQRVLAC+IIRL +++ ++ DE T
Sbjct: 938 KSFNYRVVMIQNGVELDMKGRCSAGQRVLACIIIRLALAESFCVNCGILALDEP----TT 993
Query: 1234 AIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFI 1293
+DR + K LAE S IK QKNFQLI+ITHDE F+
Sbjct: 994 NLDRFNI-------KGLAEALS--------------YLIKFRKQQKNFQLIIITHDENFV 1032
Query: 1294 ENLTAIDRA-YVVRIVRDHKGLSDI 1317
+ + + + +D +G S I
Sbjct: 1033 RVMAQAQQCDHFFHVSKDEQGYSTI 1057
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 33/259 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L++L I G+R+F D+ + F+ P+TLIVG+NG GKTTIIEC+K +++ E P +
Sbjct: 12 MSNLEKLVICGVRSFSPDRREGIAFESPITLIVGQNGSGKTTIIECLKASISGELPPSSK 71
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG+ F+HDP++ E A + I + +N + +VRS
Sbjct: 72 SGQYFIHDPKLNGSAEVRA----------------QIRLIFR---EYQNKKKIQIVRSFQ 112
Query: 121 LSNKNGK--DNCATRDTTISRKIFATGVQ-KNLGCLQQESVLEMCN--------LIGVSK 169
LS+ + D +T D ++ + +Q K+ Q S+ C L GVS
Sbjct: 113 LSHIKTRKADLKSTGDLKPQFRVLESVLQTKDEESGQVTSISHKCADINAQVPILFGVSN 172
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKA 229
+I+ NV+FCHQE+S+WPL + KVK+ FDE+F +T+Y+KALE I + K+I E KA
Sbjct: 173 SIIENVLFCHQEDSNWPLQDMAKVKKKFDELFGSTRYSKALELITKLKGEYNKKIKE-KA 231
Query: 230 HYQATLNYKKEADSKKQLI 248
+ N K++ D K +I
Sbjct: 232 LFNE--NLKQKIDFLKGII 248
>gi|116182584|ref|XP_001221141.1| hypothetical protein CHGG_01920 [Chaetomium globosum CBS 148.51]
gi|88186217|gb|EAQ93685.1| hypothetical protein CHGG_01920 [Chaetomium globosum CBS 148.51]
Length = 1282
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 31/326 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I+G+R+F + F PLTLIVG NG GKTTIIEC+K+A T E P S
Sbjct: 1 MSRIEKLSILGVRSFGPQHQETIAFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPN-S 59
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G F+HDP + + + A +F +G+ V+L + SLL
Sbjct: 60 KGGAFIHDPTLAGEKDVRAQVKVSFR--STVGESYVVTRNVQLMVKKSTRSQKTLEGSLL 117
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLI----GVSKAILNNVI 176
L N NG+ R + +T V+E+ L+ GVS A+L+ VI
Sbjct: 118 LRN-NGE-----------RHVIST------------RVMELDKLVPEKLGVSPAVLDTVI 153
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLN 236
FCHQ+ S WP+ E +K+ FDEIF+A KY K ++++KI R + +E+ E+K
Sbjct: 154 FCHQDESLWPMSEPAALKKRFDEIFEAMKYTKVIDNLKILRKKKGEELRELKLQESQDKA 213
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
K+ AD +L+ T++ ++ ++ + E M K+ E+ + + QTK
Sbjct: 214 NKERADKVNKLMGQLTREIEEGRDKYDELTEQMAEEGTKIKSKHEQANSFLRIVNDLQTK 273
Query: 297 KTERDMIQESCNELESSIKQLFSGDK 322
+ + +E+ EL S I++ D+
Sbjct: 274 TEKLEYKKEAVQELRSRIEESADTDQ 299
>gi|357462801|ref|XP_003601682.1| DNA repair protein Rad50 [Medicago truncatula]
gi|355490730|gb|AES71933.1| DNA repair protein Rad50 [Medicago truncatula]
Length = 1524
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 146/571 (25%), Positives = 261/571 (45%), Gaps = 74/571 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKT------------------- 41
M+ +D++ I GIR+F + V+ F +PLTLIVG NG GKT
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTVCSISFLNNHPHPINLIDS 60
Query: 42 -------TIIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKK 94
TIIEC+K + T E P +A SG +F+HDP++ +
Sbjct: 61 HTCIFSQTIIECLKLSCTGELP--------------------PNARSGHSFIHDPKVAGE 100
Query: 95 DETHAIVKLQC-TCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCL 153
ET +KL+ T D VC+ RS L+ K K ++ + +G + L
Sbjct: 101 TETKGQIKLRFKTAAGRDVVCI-RSFQLTQKASKMEYKAIESVLQTINPHSGEKVCLSYR 159
Query: 154 QQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
+ E+ L+GVSKAIL NVIF HQ+ ++WPL + +K+ FD+IF AT+Y KALE I
Sbjct: 160 CADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVI 219
Query: 214 KIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPIN 273
K +EI K + K A + ++ I ++ +K + +++ ++ S+K ++
Sbjct: 220 KKLHKDQAQEIKTYKLKLENLQTLKDAAYTLRENITHDQEKAESLKDQIQQLDGSIKDLD 279
Query: 274 EKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFK 333
K+ + + +++ + Q +K TER + S + S +++ F EL K
Sbjct: 280 AKIDHVDKTLKHLLELKGQISSKTTERSTLFRSQQKQYSDLEEEFEEPDEELMES----K 335
Query: 334 INLDEKCSELENQ----ERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLK 389
DEK + + Q +R KS + I+ + ++ KL+ E H L
Sbjct: 336 TKFDEKIANSQTQISKLDREKSDINTKFPVLKKTIDNSIWEISKLQ--TEAHMSLRSERD 393
Query: 390 TKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAE 449
+ + N+ D L + K ++ E+ L ++ S + LE+ D +N E
Sbjct: 394 SCIKNIFDRYNLGSLPKPPFSAEDALNL-------TNRVKSRLGDLEKDLEDKKNANNTE 446
Query: 450 INALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN-SE 508
+ + ++ + +I+ ++ +I +I E ++ L+ + +++ ++ S
Sbjct: 447 LKMAWDCYLNANESWQNTEAKIQTKREHKAGIIKRIEE---KKNELESFELEISNIDVSH 503
Query: 509 IDQLSKSLDPDQLKNEIEAWIRQRNELEDEL 539
+D+ + +L+ +E I+QR+E E EL
Sbjct: 504 LDERER-----ELQIRLEGKIKQRDEREFEL 529
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 110/200 (55%), Gaps = 35/200 (17%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ Y+ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W + Y+G DID
Sbjct: 1325 KRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDID 1384
Query: 1159 YISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
ISI +D G R+Y+Y+V+ + E +MR RCSAGQ+VLA LIIRL +++
Sbjct: 1385 CISIHSDSEGGGT--RSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLN 1442
Query: 1219 LIVITHDEEFIENLTAID----RAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
++ DE NL + A ++RI+ D K+
Sbjct: 1443 CGILALDEP-TTNLDGPNAESLAAAILRIMEDRKS------------------------- 1476
Query: 1275 ASDQKNFQLIVITHDEEFIE 1294
Q+NFQLIVITHDE F +
Sbjct: 1477 ---QENFQLIVITHDERFAQ 1493
>gi|325183051|emb|CCA17506.1| DNA repair protein RAD50 putative [Albugo laibachii Nc14]
Length = 1272
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 108/213 (50%), Gaps = 58/213 (27%)
Query: 1104 RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIA 1163
++ Q + + + + DL Y+ L++ +++YHS+K+ IN +IR W Y+G DID I +
Sbjct: 1078 KLIQYETTMLAVKDLETYYKALDHSLLQYHSKKIEEINSIIRTLWRITYKGQDIDTIELV 1137
Query: 1164 ADVGTGS-----EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
+ T + R+YNYRVV K + DMR RCSAGQ+VLA L+IRL
Sbjct: 1138 SGEDTTETSVTFKAARSYNYRVVMVKGNVSIDMRGRCSAGQKVLAALVIRL--------- 1188
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA--- 1275
ALAETF NCGI ALDEPTTNLD +N
Sbjct: 1189 ------------------------------ALAETFCLNCGILALDEPTTNLDTENKYGL 1218
Query: 1276 -----------SDQKNFQLIVITHDEEFIENLT 1297
S Q NFQLI ITHDEEF++ L+
Sbjct: 1219 AQAITDIIHARSSQHNFQLICITHDEEFVQMLS 1251
>gi|407420252|gb|EKF38521.1| DNA repair protein RAD50, putative [Trypanosoma cruzi marinkellei]
Length = 1348
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 219/433 (50%), Gaps = 66/433 (15%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ I G+R+F PA + +V FQ+PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIQISGVRSFDPNPAHRQTIV-FQKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G+ S K+ +FV+DP++ + + A ++L T + V+R
Sbjct: 60 GSGSEKS-------------------SFVYDPKVMGETDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNV 175
S K T D+T++ + ATG K L + + ++ + ++GVS A+L +V
Sbjct: 101 SFQALRTRTKTTFTTLDSTVAFQDTATG--KVLSSTYRANDVDRAVPEMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+++WPL K+VK+IFDEIF AT+Y AL+ ++ R++ E +A+ A
Sbjct: 159 IFCHQEDANWPLLPPKEVKKIFDEIFAATRYVLALDRLRENSKEFRRQQKEHEANLMALR 218
Query: 236 NYKKEAD------SKKQLIYNNTQKRDQSFE----ELHNIEESMKPINE---------KL 276
++++A + K+ + Q+R +S E ELH + ++ + + +
Sbjct: 219 EHREQAQQLTGDIAAKEELVRTIQQRAKSLEPQLKELHAVTAALSAVEQGAEGLAREAAM 278
Query: 277 VQ--LTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKI 334
+Q + EK+ ++S M+ T E +M+ E + + G +A+ K+NL +
Sbjct: 279 IQGRIDEKQESLSRMTLPPTTLTIE-EML-----EFKQGFVERIKGVEADASDKVNLLEK 332
Query: 335 NLDEK--CSELENQERLKSQYI-QEEKQSHTHINEAQ---------MKLGKLERDEETHK 382
+K C E + R ++++ Q+E+Q + E Q + LG + EE +
Sbjct: 333 AEAKKQQCEETALRLRSTTEFLEQQERQYKENCMELQGIVKNLSTGLVLGDDDMCEEGLQ 392
Query: 383 KLNDTLKTKLNNL 395
+++D L +L L
Sbjct: 393 RVSDHLNAELQML 405
>gi|303389895|ref|XP_003073179.1| Rad50-like DNA repair protein [Encephalitozoon intestinalis ATCC
50506]
gi|303302324|gb|ADM11819.1| Rad50-like DNA repair protein [Encephalitozoon intestinalis ATCC
50506]
Length = 1240
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L I GIR+F + ++ F PLTLIVG NG GKTTIIE +K+ T P
Sbjct: 1 MSSLKKLMIRGIRSFSHREGSILEFYSPLTLIVGPNGTGKTTIIESLKYISTGSLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F++DPR+ + E VKL T + +T+ RSL
Sbjct: 59 -------------------SRGGAFIYDPRVARLVEVQGQVKLLFTNVHGETMVCSRSLQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L+ + GK T ++ + + GV G + E M GVS ++L NVIFCHQ
Sbjct: 100 LTQRGGKKEQKTLESMVWAEKDGGGVSGRSGDVDTE----MPQHFGVSSSVLENVIFCHQ 155
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
E S+WPL E VK+ DEIF + KY KAL+S+K
Sbjct: 156 EESTWPLGEPIVVKKKLDEIFASVKYGKALDSLK 189
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 29/220 (13%)
Query: 1098 IREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
+ +Y ++K EI DL K L+ ++ +H+ K+ +N +++ W Y+G+D+
Sbjct: 1041 VEDYNKCFIEVKALEISSLDLEKCIQALDKAIVDFHTSKLEEVNATLKDLWMNTYRGDDV 1100
Query: 1158 DYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
D+I I T S +RTYNY+VV K G+E DMR R SAGQ+++A ++IRL ++D
Sbjct: 1101 DWIEIK----TESSGQRTYNYKVVFIKGGVELDMRGRSSAGQKMIASILIRLALADSFAS 1156
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
++ D E T +DR + ++LA T S+ I + + +N +
Sbjct: 1157 NCNILALD----EPTTNLDRDNI-------ESLAFTLSK---IISKHKKDSNFQL----- 1197
Query: 1278 QKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDI 1317
IVITHDE+F++ L+ Y R+ R+ G S I
Sbjct: 1198 ------IVITHDEDFVQLLSRDGPEYFYRLSRNGNGDSTI 1231
>gi|71409626|ref|XP_807148.1| RAD50 DNA repair protein [Trypanosoma cruzi strain CL Brener]
gi|70871085|gb|EAN85297.1| RAD50 DNA repair protein, putative [Trypanosoma cruzi]
Length = 675
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 213/414 (51%), Gaps = 59/414 (14%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M ++Q+ I G+R+F PA + +V FQ+PLT+I+G+NG GKTTIIE + A T + P
Sbjct: 1 MTSIEQIQISGVRSFDPNPAHRQTIV-FQKPLTVILGKNGAGKTTIIEALLNACTGQMPP 59
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G+ S K+ +FV+DP++ + + A ++L T + V+R
Sbjct: 60 GSGSEKS-------------------SFVYDPKVMGETDVKAQIRLLFTGRGGKVMQVIR 100
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLE--MCNLIGVSKAILNNV 175
S K T D+T++ + ATG K L + + ++ + ++GVS A+L +V
Sbjct: 101 SFQALRTRTKTTFTTLDSTVAFQDTATG--KVLSSTYRANDVDRAVPEMLGVSPAVLEHV 158
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
IFCHQE+++WPL K+VK+IFDEIF AT+Y AL+ ++ R++ E +A+ A
Sbjct: 159 IFCHQEDTNWPLLPPKEVKKIFDEIFAATRYVLALDRLRENSKEFRRQQKEHEANLMALR 218
Query: 236 NYKKEAD------SKKQLIYNNTQKRDQSFE----ELHNIEESMKPINE---------KL 276
++++A + K+ + Q+R +S E ELH + ++ + + +
Sbjct: 219 EHREQAQQLTGDIAAKEELVRTIQQRAKSLEPQLKELHAVTAALSAVEQGAEGLAREAAM 278
Query: 277 VQ--LTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKI 334
+Q + EK+ ++S M+ T E +M+ E + + G +A+ K NL +
Sbjct: 279 IQGRIDEKQESLSRMTLPPMTLTIE-EML-----EFKQGFAERIKGLEADASDKANLLEK 332
Query: 335 NLDEK--CSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLND 386
+K C E + R +++++++++ + E++M+L + ++ T L D
Sbjct: 333 AEAKKQQCEETALRLRSTTEFLEQQERQY---KESRMELQGIVKNVSTGLVLGD 383
>gi|402077911|gb|EJT73260.1| DNA repair protein RAD50 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1317
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 189/730 (25%), Positives = 316/730 (43%), Gaps = 121/730 (16%)
Query: 640 RDQKRTLAELMDRMELV----LGSKPFEDE----LDRVTLELKREQEEVSMMTSTQYLFN 691
RD++R L + ++R E V L EDE ++ L +E++S + LF+
Sbjct: 612 RDEERALTKELERCEAVARKALSQVKREDEPEPQIESFLATLTATEEDLSTTETDIALFD 671
Query: 692 SYIG-------KLEENEPRCPLCTRFF-ESDYSVPGLV-NKLKTKIKE--IPEQTNNKKT 740
+ + KL E+ +C LC R F E D GL +KL KI + P + N K
Sbjct: 672 ALLKHYGAADKKLNEDN-KCSLCERTFGERD----GLAKSKLMRKIAKHLDPAEKNILKE 726
Query: 741 HIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALET 800
L + L+ + YE + Q++ +P + K+ +LE + +L+ AL
Sbjct: 727 EKVVLSRNVVILKNARKSYEAYQRAQES-LPGAQDKIKDLESSKDAVVKDLEAHDAALRD 785
Query: 801 PKTKEKTALSLQGDLTLLDQNIRELNTLQRELER---QESKISGMRSTGVDLDQVLAQQK 857
+ K + S+ + + + ++E+ER Q+S IS +RS ++ L
Sbjct: 786 AEEKLREVESMAKAVRSITDAQARIRETEKEIERLSSQQSSISAVRS-AQEIQDDLVDCS 844
Query: 858 EKKNELNTFRSKIESGQTRLNSHNEKLQ----SLQKQKNDIHSKQLTVQGGAGMLKSLED 913
E+ L+ SK+ + + R +L+ LQ++ ++ K + + +++L+
Sbjct: 845 ERTRALSNKISKLSADRQRRKDMVSQLELDKSGLQRKMSEFEQKLVRKRDLVAQMETLKK 904
Query: 914 RKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTK 973
+ EL ELE+L K+A + L + E+ E K+ ++ T
Sbjct: 905 DRAELAEKKEEDGIELEQLEPKIAKAKA---LREQEVS----EGFIKIQAADSQRSSITS 957
Query: 974 QLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERT--------- 1024
+E++K I EI NY +RG LAA S++ L Q V ERT
Sbjct: 958 TVEKLKSISAEIENYVERGGPGLLAASELSIRNLEQ----------VIERTEKELNKLTA 1007
Query: 1025 -INEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEI---------MISDLTK 1074
IN++ Q +A+ +E ++K+NL + + + L E+ E + ++
Sbjct: 1008 KINKLRQELADSGRKEKNIKDNLNFNKTQRVLETLQREIGQLERRNAEEDWNRIDAEANA 1067
Query: 1075 YHHTLENCVIKYHS--------------------QKMRSINRLIREYWTRIYQLKLSEIM 1114
+ H + K HS Q + RE ++ K +
Sbjct: 1068 FKHKRDMLSGKSHSLMGTISTKEEVLLSNEEMYEQDYKDARTKYREAHIKVETTKAA--- 1124
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV----GTGS 1170
I D+ Y LE ++ +HS KM +NR+ E W YQG DID ISI ++ T S
Sbjct: 1125 IEDMASYVAALEQAILSFHSLKMEEVNRIAGELWRATYQGTDIDTISIKSEAEGSSTTTS 1184
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIE 1230
RR+YNYR+ K +E DMR RCSAGQ+VLA +IIRL +++ ++ D E
Sbjct: 1185 TLRRSYNYRLCMVKGDLEMDMRGRCSAGQKVLASIIIRLALAESFGVSCGLVALD----E 1240
Query: 1231 NLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDE 1290
T +D A + ++LA + ++ I+ Q NFQLI+ITHDE
Sbjct: 1241 PTTNLDEANI-------RSLA------VSLHSI--------IQARQAQANFQLIIITHDE 1279
Query: 1291 EFIENLTAID 1300
F+ + D
Sbjct: 1280 AFLRAMQVSD 1289
>gi|326479028|gb|EGE03038.1| DNA repair protein Rad50 [Trichophyton equinum CBS 127.97]
Length = 690
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 128/245 (52%), Gaps = 35/245 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+D+L I+G+R+F ++ ++F PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 28 IDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPN----- 82
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
S G F+HDP++ + E A VKL + + V RSL L+
Sbjct: 83 ----------------SKGGAFIHDPKLCGEKEVFAQVKLAFKATSAAKMVVTRSLQLTV 126
Query: 124 KNGKDNCATRDTTISRKIFA------TGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
K + T+ ++ T + + L Q M +GVSKA+L++VIF
Sbjct: 127 KK----LTRQQKTLEGQLLMIKEGERTAISSRVAELDQI----MPQYLGVSKAVLDSVIF 178
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CHQ+ S WP+ E +K+ FDEIF+A KY KA+++IK R + +E+ + K +
Sbjct: 179 CHQDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELAKYKIMENHARDD 238
Query: 238 KKEAD 242
K +AD
Sbjct: 239 KDKAD 243
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 92/182 (50%), Gaps = 41/182 (22%)
Query: 1107 QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV 1166
+++ ++ + DL +Y L+ ++KYH KM INR+I E W + Y+G D+D I I +D
Sbjct: 469 KVETTKAAVEDLGRYGGALDKAIMKYHGLKMEEINRIIGELWQKTYRGTDVDTILIRSD- 527
Query: 1167 GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------- 1213
S R+YNYRV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 528 NESSRGNRSYNYRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDE 587
Query: 1214 --------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
Q NFQLIVITHDEEF+ ++ D Y R+ R+
Sbjct: 588 PTTNLDRDNIRSLAESLHEIIRARQQQANFQLIVITHDEEFLRSMQCGDFCDYYYRVSRN 647
Query: 1247 HK 1248
+
Sbjct: 648 ER 649
>gi|86170605|ref|XP_966048.1| DNA repair-like protein, putative [Plasmodium falciparum 3D7]
gi|259551807|sp|C6KSQ6.1|RAD50_PLAF7 RecName: Full=Probable DNA repair protein RAD50
gi|46362290|emb|CAG25228.1| DNA repair-like protein, putative [Plasmodium falciparum 3D7]
Length = 2236
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 57/217 (26%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+EY +I ++ + + +I DL +H + + +IK+HS KM+ IN I+ W R+Y DID
Sbjct: 2033 KEYKKKIIEIFVYKNLIKDLQNFHFSFDQAIIKFHSLKMQEINLSIKNLWRRVYNSADID 2092
Query: 1159 YISIAADVGT----GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
YI I +D+ T S +RR+YNYRVV K+ E DM+ RCS+GQ+VL+ +IIRL
Sbjct: 2093 YIYIKSDIQTEPTDKSSQRRSYNYRVVMVKDNCELDMKGRCSSGQKVLSSIIIRL----- 2147
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
ALAE+FS CGI ALDEPTTNLD N
Sbjct: 2148 ----------------------------------ALAESFSIKCGILALDEPTTNLDKAN 2173
Query: 1275 ASD--------------QKNFQLIVITHDEEFIENLT 1297
+ + +FQLI+ITHD F++ L+
Sbjct: 2174 SRNLASLLANIVELRKSSSSFQLILITHDNYFVDILS 2210
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 42/226 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L+++ I GIR++ + ++ F P+T+I G NG GK+TIIEC+K + T ++P A
Sbjct: 1 MTTLEKIGIQGIRSYNDEDVEILEFATPITIIYGNNGSGKSTIIECLKVSCTGDFPPNAE 60
Query: 61 SGKNFVHDPRIGKKDEASASSGK--NFVHDPRIG---------KKDETHAIVKLQCTCEN 109
GK+F+HDP I K N ++ RIG KD+ + +N
Sbjct: 61 KGKSFLHDPLISNKMNIRGKIDVLLNNYNNKRIGISRSYNLFYSKDKNKKVKHTFRALDN 120
Query: 110 NDTVCVVRS--LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGV 167
N + + L+++NK C + I + L+GV
Sbjct: 121 NIIIKKEKGDDLIITNK-----CVDINNHIPK------------------------LMGV 151
Query: 168 SKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
SKA+L NVIFCH + + WP E K+K+ FDE+F ++K LE +
Sbjct: 152 SKALLENVIFCHHDENLWPFSESIKIKKKFDELFGDDHFSKILEEL 197
>gi|302409644|ref|XP_003002656.1| DNA repair protein RAD50 [Verticillium albo-atrum VaMs.102]
gi|261358689|gb|EEY21117.1| DNA repair protein RAD50 [Verticillium albo-atrum VaMs.102]
Length = 1195
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 36/237 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGA 59
M+ +++L + GIR+F R ++F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSKIEKLSVQGIRSFGTGSGRETMQFFTPLTLIVGYNGSGKTTIIECLKYATTGEQPPN- 59
Query: 60 SSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL 119
S G FVHDP++ + E A VKL T V RSL
Sbjct: 60 --------------------SKGGAFVHDPKLVGEKEVLAQVKLAFTSTTGVKHVVTRSL 99
Query: 120 LLSNKNGKDNCATRDTTIS------RKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILN 173
L+ K + T + +++ R + +T V + E+V L+GVS AIL+
Sbjct: 100 QLTIKKTTRSLKTLEGSLATNNNGERSVLSTRVAQ-----MDEAV---PALLGVSTAILD 151
Query: 174 NVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAH 230
VIFCHQ+ S WP+ E +K+ FD+IF+A +Y KA++++K+ R + +E+ +K H
Sbjct: 152 YVIFCHQDESLWPMSEPGALKKQFDQIFEAMRYTKAIDNLKVLRKKQGEELARLKIH 208
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 173/667 (25%), Positives = 305/667 (45%), Gaps = 95/667 (14%)
Query: 703 RCPLCTRFFESDYSV------PGLVNKLKTKIKE-IPEQTNNKKTHIDQLCKQQRSLQEL 755
+C LC R F+ SV L+ L KE E + K +D+L R ++
Sbjct: 573 KCKLCDRGFDDKQSVNKSRFSDKLIKYLDPSKKEKASEDLDKSKATLDKL----RQVRVH 628
Query: 756 KPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDL 815
YE + ++P L+ LE + + +L++ + + K+ +L +
Sbjct: 629 HETYERSL----GELPGLKEACKTLEAELETHERQLEEHDENVNAEEAKQADVETLNKTV 684
Query: 816 TLLDQNIRELNTLQRELERQESK-ISGMRS-TGVDLDQVLAQQKEKKNELNTFRSKIESG 873
+ Q ++++ + ++ER S+ SGM + T ++ ++ A KE+ +KI +
Sbjct: 685 MNISQTLKDMKDSEAQVERIMSQQSSGMATRTADEIHELQATCKEQMRSTKARLTKITTD 744
Query: 874 QTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM--DSVYQTEL-E 930
+ R+ ++L SL+ +K+++ +K VQ L+ +D + +++ + D Q EL +
Sbjct: 745 RQRMR---DQLNSLELEKSELKNKLSRVQS---QLERKKDFQNQIQTLKEDQANQRELIQ 798
Query: 931 ELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQD---YTKQLEEVKRIKLEILN 987
+ + + IE + A++ D + + K E A +++ + E+K ++ +I +
Sbjct: 799 KADQDLEVIEPSIAEARAVRDDTLQRGRAK---EKAIVEERDLVANSVTELKMVESDIQD 855
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIA--KRGVCERTI--NEINQSIANQSLEEIDLK 1043
Y RG + LAA + ++ L E IA ++ + + T+ N++ Q I N ++ ++
Sbjct: 856 YMDRGGPSNLAANQRAIDGL----EKTIAATEQEISDLTVRTNKLKQDIDNGDRKKQNIS 911
Query: 1044 NNLTLLEKKEAVAKLNEELKLSEIMISD------------LTKYHHTL---ENCVIKYHS 1088
NNL + K + L E+ + +D L H+ L ++
Sbjct: 912 NNLKFRQNKRQLDVLRAEIDDLQSCDADDDYDRLNDEAVQLENRHNMLVAERGSLMGQMK 971
Query: 1089 QKMRSINRLIREYWTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
K + RL+ E W Y +++ ++ I DL +Y L+ +++YH K
Sbjct: 972 TKDEELARLLGE-WEMDYRDASKKYRESHIKVETTKAAIEDLGRYGAALDKAIMQYHGLK 1030
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCS 1196
M +NR+ E W YQG DID I I +D G+ RR+YNYRV K E DMR RCS
Sbjct: 1031 MEEVNRIAGELWQSTYQGTDIDTILIRSD-NEGATGRRSYNYRVCMVKQDTEMDMRGRCS 1089
Query: 1197 AGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
AGQ+VLA +IIRL +++ +I DE T +D+ + K+LAE+
Sbjct: 1090 AGQKVLASIIIRLALAESFGVNCGLIALDEP----TTNLDKDNI-------KSLAESLHH 1138
Query: 1257 NCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLS 1315
IK+ Q NFQLIVITHDEEF+ ++ + R+ RD K S
Sbjct: 1139 I--------------IKSRQAQSNFQLIVITHDEEFLRHMRCSEFCDSFFRVKRDDKQCS 1184
Query: 1316 DIHLRSL 1322
I S+
Sbjct: 1185 VISRESI 1191
>gi|349603499|gb|AEP99321.1| DNA repair protein RAD50-like protein, partial [Equus caballus]
Length = 747
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 140/594 (23%), Positives = 313/594 (52%), Gaps = 27/594 (4%)
Query: 372 GKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSD 431
G+L+ E+ H++ + + +LA L LD + ++ + + K+ + ++
Sbjct: 155 GRLQLQEDRHREHVRARDSLIQSLASQLELDGFERGPFSERQIKNFHKLVRERQEREAET 214
Query: 432 IKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIEGNKKDLTNVITQI 485
L +++ E+ KQ +I+ + +K +EL+S+I + KQ +L NV ++
Sbjct: 215 ASHLMNDYAEKESLKQKQIDEIRDKKTGLGRIIELKSEILTKKQ------NELKNVKYEL 268
Query: 486 NEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAE 545
++ S + L +L + E+ + KS + + LK E+ + ++ +L+ L +D E
Sbjct: 269 QQLEGSSDRILELDQELTKAERELSKAEKSSNVEMLKTEVISLQNEKADLDRTLRKLDQE 328
Query: 546 ISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALS 605
+ L T +++ L K K I +K RH L P K L+ L
Sbjct: 329 MEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPN---KKQLEDWLH 385
Query: 606 SITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDE 665
S + +IN+ ++ + K L + E N ++ + ++ ++ L+ D++ V GS+ F+ +
Sbjct: 386 SKSKEINQTRDRLARLNKELASAEQNKNHINIEIKRKEEQLSSYEDKLFDVCGSQDFDSD 445
Query: 666 LDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFFESDYSVPGLVNKL 724
LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F+++ + +++ L
Sbjct: 446 LDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDL 505
Query: 725 KTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENV 784
++K++ P++ + ++ + + K++ + L PV ++I+ L++ +IP LR+KL + ++
Sbjct: 506 QSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDI 565
Query: 785 IETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRS 844
K ++++ +T L +E++A D++++++ EL ++R++ +Q +K+ G+
Sbjct: 566 QRLKNDVEEQETLLGVIMPEEESAKVCLTDVSIMERFQMELKDVERKIAQQAAKLQGL-- 623
Query: 845 TGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLT 900
DLD QV +++EK+++L+T SKIE + + E++Q L+ N++ S++L
Sbjct: 624 ---DLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKFIQDQQEQIQYLKSITNELKSEKLQ 680
Query: 901 VQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLAQSELDAL 953
+ + LE++ EL + S+Y+ E+++ +V+P+ET L Q E + L
Sbjct: 681 ISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKFQQEKEEL 733
>gi|82595351|ref|XP_725813.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23480956|gb|EAA17378.1| unnamed protein product [Plasmodium yoelii yoelii]
Length = 1919
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 121/237 (51%), Gaps = 58/237 (24%)
Query: 1100 EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
EY ++ ++ + + +I DL+ +H++ + +IK+HS KM+ IN I+ W R+Y DIDY
Sbjct: 1717 EYKKKLIEICVYKNVIKDLSNFHNSFDQAIIKFHSLKMQEINLSIKNLWRRVYNNPDIDY 1776
Query: 1160 ISIAADVGT-GSEK---RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQK 1215
I I +D+ +EK RR+YNYRVV K+ E DM+ RCS+GQ+VL+ +IIRL
Sbjct: 1777 IYIKSDLEIENNEKINQRRSYNYRVVMVKDNCELDMKGRCSSGQKVLSSIIIRL------ 1830
Query: 1216 NFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA 1275
ALAE+FS CGI ALDEPTTNLD N+
Sbjct: 1831 ---------------------------------ALAESFSIKCGILALDEPTTNLDKSNS 1857
Query: 1276 SDQKN--------------FQLIVITHDEEFIENLTAIDRAYVVRIVR-DHKGLSDI 1317
+ N FQLI+ITHD F++ L+ VR D G S I
Sbjct: 1858 KNLANLIANIVDLRKNSSSFQLILITHDTYFVDALSQYGLTNCFYKVRKDRNGYSQI 1914
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 176/386 (45%), Gaps = 62/386 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M LD++ I GIR++ + + + F P+T+I G NG GK+TIIEC+K T ++P A
Sbjct: 30 MTTLDKIGIQGIRSYCDEYPQQLEFSSPITIIYGNNGSGKSTIIECLKVNCTGDFPPNAE 89
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
GK+F+HDP I K GK D L NN + + RS
Sbjct: 90 KGKSFIHDPLISNKMNVR-------------GKID-------LLLKNYNNKKIGISRSFS 129
Query: 121 LSNKNGKDN-----CATRDTTISRK------IFATGVQKNLGCLQQESVLEMCNLIGVSK 169
L K N + D I K I T ++ C + L+GVSK
Sbjct: 130 LYYSKDKQNRIKHTFRSLDNNIIIKKDKGDDIIITNKCVDINC-------HIPKLMGVSK 182
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----KIQRDRLRK--- 222
A+L NVI CH + S WP E K+K+ FDE+F ++K LE + K + L+K
Sbjct: 183 ALLENVILCHHDESLWPFSESTKIKKKFDELFGDDNFSKILEELVKCKKKMNEILKKKNY 242
Query: 223 EIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHN---IEESMKPINEKLVQL 279
E+ IK Y+ N E + + I N Q EEL + + K N L ++
Sbjct: 243 ELINIKDSYEKKKNIFLEIEKNQAEIENEKIFIQQEKEELKKKTILLDQFKNKNNILYKI 302
Query: 280 TEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEK 339
+ V+ ++Q+ IQ+ N +K+++ +EL+ +LFK +L K
Sbjct: 303 SSDIDTYFVLYERHQSD------IQQYKN-----MKEIYEESSSELEKFSDLFKTDLI-K 350
Query: 340 CSELENQERLKSQYIQEEKQSHTHIN 365
C+EL E++ + I+ E++S +N
Sbjct: 351 CNEL--IEKINDEIIKLEEESENCLN 374
>gi|67623709|ref|XP_668137.1| RAD50 DNA repair protein-related [Cryptosporidium hominis TU502]
gi|54659321|gb|EAL37903.1| RAD50 DNA repair protein-related [Cryptosporidium hominis]
Length = 585
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 33/259 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L++L I G+R+F D+ + F+ P+TLIVG+NG GKTTIIEC+K +++ E P +
Sbjct: 1 MSNLEKLVICGVRSFSPDRREGIAFESPITLIVGQNGSGKTTIIECLKASISGELPPSSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG+ F+HDP++ E A + I + +N + +VRS
Sbjct: 61 SGQYFIHDPKLNGSAEVRA----------------QIRLIFR---EYQNKKKIQIVRSFQ 101
Query: 121 LSNKNGK--DNCATRDTTISRKIFATGVQ-KNLGCLQQESVLEMCN--------LIGVSK 169
LS+ + D +T D ++ + +Q K+ Q S+ C L GVS
Sbjct: 102 LSHIKTRKADLKSTGDLKPQFRVLESVLQTKDEESGQVTSISHKCADINAQVPILFGVSN 161
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKA 229
+I+ NV+FCHQE+S+WPL + KVK+ FDE+F +T+Y+KALE I + K+I E KA
Sbjct: 162 SIIENVLFCHQEDSNWPLQDMAKVKKKFDELFGSTRYSKALELITKLKGEYNKKIKE-KA 220
Query: 230 HYQATLNYKKEADSKKQLI 248
+ N K++ D K +I
Sbjct: 221 LFNE--NLKQKIDFLKGII 237
>gi|170594123|ref|XP_001901813.1| rad50 family protein [Brugia malayi]
gi|158590757|gb|EDP29372.1| rad50 family protein [Brugia malayi]
Length = 1329
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 222/950 (23%), Positives = 424/950 (44%), Gaps = 120/950 (12%)
Query: 425 IDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQ 484
I+K DI + + + Q EI+++ +L +KI+ ++ + +D+T +
Sbjct: 429 IEKRKEDISNFKNEMEEKQTNCQKEIDSISGVLAQLTAKIELKNEERKRLDEDITVIKCN 488
Query: 485 INEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDA 544
+ E + S L LQ ++ E++ + ++ + L N +E +RN + +++ ++
Sbjct: 489 LMEASTSSQKLDRLQDEILEQEKELEVMREN---EALGNTVENLRNERNSITNKIELLKK 545
Query: 545 EISILQAQNITLAEIKSLKNRKESKLA----DINLLKERHDRAFHLLFDMIPEENFKNSL 600
E + + + EI++ ++ +LA ++ LK +H A +F E F S
Sbjct: 546 EYCVRE----NVEEIENKIKQRSGELAKFEKELCALKNKHQIALLEIFST-DEPXFPLS- 599
Query: 601 DKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDRM------- 653
+ Q +++ E E VS + L R L +L DR+
Sbjct: 600 ----ERLIIYARNTQNNLSTAEDEFKIREKEVSRAQFALSQVGRELDQLSDRIASCRRKI 655
Query: 654 -ELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFE 712
++V E L+ + L++ Q++ + +L+ + ++ + CPLC E
Sbjct: 656 TKVVTHEDEVEPRLNEIRTLLRKSQQDSGRINGCVFLYEQW-EEIVNMKKCCPLC----E 710
Query: 713 SDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQ----ELKPVYENIMKLQDT 768
YS N LK KI++ E N + + K ++Q E+ P Y ++K ++
Sbjct: 711 QSYSGIENSNVLKEKIRQRKEGFNQDAEKLIRKVKDYEAMQNELLEIVP-YVGMLKQSNS 769
Query: 769 DIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTL 828
+ L+ + EE + + + E K K+ + K LS+Q D++L+D + L+
Sbjct: 770 EKEGLQENFKKAEEKLRDVEVEFAKSKSERDIILQKLNVILSVQIDISLMDNIWKSLSDA 829
Query: 829 QRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
+ +++ +++I T LD + + +E + ++I+ Q + +E+ + ++
Sbjct: 830 KHDIKLLKTEIDASECTKQSLDDMRIEIRENEKRFTELINRIDMIQA---AASERSKLVE 886
Query: 889 KQKNDIH---SKQLTVQGGAGML------KSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
K N SK+L ++ KSLE ++ ELE + L++L + +
Sbjct: 887 KAMNPFQLNASKELRTALCEKIVQFDSIKKSLEIKEKELEK----NKQNLQKLKEQKPVV 942
Query: 940 ETQLNLAQSELDALKKEHKKKLNE--------EGA---------KIQDYTKQLEEVK--- 979
E +L + + + ++ E K K E E A K+QD +++K
Sbjct: 943 EAELQMKKEQRFIIQNETKNKEAELLCLLRDAEDAAKELEMIDKKLQDAVDSTDDLKDRE 1002
Query: 980 ----RIKLEI--LNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIA 1033
+I EI N R Q+ L S Q+ R +D + K + ER +
Sbjct: 1003 KDLLKIDTEIGASNAKMRHLTGQIDCLN-SKQERKHRLDDQLRKLELQERIKS------L 1055
Query: 1034 NQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI-----SDLTKYHHTLENCVIKYHS 1088
++SLEE + + E +E ++ L+ ++ ++MI + L K T+E +
Sbjct: 1056 DKSLEETEWYGK-AIPELREELSSLSNQVNDLQLMIENKRGAKLRKRLATMEKFLASSEY 1114
Query: 1089 QKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYW 1148
+ ++ E+ + + + + +I DL Y ++ V+K+H+QKM IN ++ W
Sbjct: 1115 AEFKA------EFKKEVVKKCVIKRVIEDLANYIRAVDESVVKFHAQKMEEINEVLSSLW 1168
Query: 1149 TRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIR 1208
++Y GNDI+ I I ++ +EK+++YNYRVV G E DM RCSAGQ++LA ++IR
Sbjct: 1169 EQVYHGNDIETIQIKSESAGENEKKKSYNYRVVMYVGGTEIDMPGRCSAGQKMLASILIR 1228
Query: 1209 LFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTT 1268
+ +SD + +I DE NL V+++ LA+ S C
Sbjct: 1229 IALSDVFCDKCSIIALDEP-TANLD------VLKVKNLGDMLADIISARC---------- 1271
Query: 1269 NLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDI 1317
A++ K FQLI+ITHD F+E+L + R +V + +D GLS +
Sbjct: 1272 ------ANNAKMFQLIIITHDNRFVEHLRQLCRPEWVYSVSKDDAGLSRV 1315
>gi|302851366|ref|XP_002957207.1| hypothetical protein VOLCADRAFT_32846 [Volvox carteri f.
nagariensis]
gi|300257457|gb|EFJ41705.1| hypothetical protein VOLCADRAFT_32846 [Volvox carteri f.
nagariensis]
Length = 178
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 106/206 (51%), Gaps = 36/206 (17%)
Query: 9 IMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHD 68
I GIR+F D ++ F +PLT++VG NG GKTTIIEC++ A T E P G+ FVHD
Sbjct: 1 IKGIRSFSPDNEYIIEFYKPLTIVVGSNGAGKTTIIECLRNATTGELPPNTRQGQGFVHD 60
Query: 69 PRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKD 128
P++ + E A +KL + V RS L+ K
Sbjct: 61 PKVAGETEVKAQ--------------------IKLSFKTATGQPIYVTRSFQLTQKKTAL 100
Query: 129 NCATRDTTISRKIFATGVQKNLGCLQQESVLEMC--------NLIGVSKAILNNVIFCHQ 180
+ D +S + +N G Q+ESV C L+GVSKA+L NVIF HQ
Sbjct: 101 QFKSLDAVLSCR------NRNTG--QRESVTYRCADLDRMVPTLMGVSKAVLENVIFVHQ 152
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKY 206
E S+WPL EGK +KE FD+IF ATKY
Sbjct: 153 EESNWPLAEGKVLKEKFDDIFAATKY 178
>gi|384248477|gb|EIE21961.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1431
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 114/220 (51%), Gaps = 28/220 (12%)
Query: 1105 IYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAA 1164
+ +LK +E+ SDL KYH LE ++ +H+ KM IN++++E W + Y+ DIDYI IAA
Sbjct: 1238 LIELKTTEMAASDLDKYHKALEKALLAFHTAKMADINKIVKELWQKTYRNQDIDYIQIAA 1297
Query: 1165 DVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITH 1224
D G+ R+YNYRV G E DMR RCSAGQ+VLACLIIRL +++ ++
Sbjct: 1298 DADHGAA--RSYNYRVTMVAGGAELDMRGRCSAGQKVLACLIIRLALAETFCLNCGILAL 1355
Query: 1225 DEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLI 1284
DE T +D A + AL + ++ Q NFQL+
Sbjct: 1356 DEP----TTNLDEANSASLA---DALRQIMAQRAA------------------QANFQLV 1390
Query: 1285 VITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDIHLRSLL 1323
VITHDE F + + ++ RI +D S I LL
Sbjct: 1391 VITHDERFANMIGTREHTEFMWRITKDQDQHSHIAQEPLL 1430
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 123/273 (45%), Gaps = 60/273 (21%)
Query: 9 IMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHD 68
I GIR+F D V+ F +PLTLIVG NG GKT
Sbjct: 221 IKGIRSFSPDNQHVIEFYKPLTLIVGHNGAGKT--------------------------- 253
Query: 69 PRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKD 128
I ++E A +KL+ V ++R+ L+ K
Sbjct: 254 ----------------------IAGENEVKAQIKLRFKTATGQPVVIIRAFQLTQKKTAL 291
Query: 129 NCATRDTTISRKIFATGVQKNLG--CLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWP 186
D T+ T ++ L C + ++ +L+GVSKAIL NVIF HQE+S+WP
Sbjct: 292 QFKALDQTLQTINRDTNKKEALSYRCADMDRIVP--SLMGVSKAILENVIFVHQEDSNWP 349
Query: 187 LDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQ 246
L EG+ +K+ FD+IF ATKY KALE+++ R ++ E K + N + D+ +
Sbjct: 350 LAEGQILKKRFDDIFAATKYTKALEALRKLRTEKMADVKEFKLRLE---NLRTHKDNAAR 406
Query: 247 LIYNNTQKRDQSFEELHNIEESMKPINEKLVQL 279
L + + Q + L +I + I+E+L QL
Sbjct: 407 LRRDVEEGEAQERKLLDHI----RAIDEQLTQL 435
>gi|380495103|emb|CCF32653.1| DNA repair protein RAD50, partial [Colletotrichum higginsianum]
Length = 679
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 36/234 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D+L + GIR+F + + F PLTLIVG NG GKTTIIEC+K+A T E P
Sbjct: 1 MSKIDKLSVQGIRSFGGSRE-TISFYTPLTLIVGYNGSGKTTIIECLKYATTGEQPPN-- 57
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP++ + E A VKL T + RSL
Sbjct: 58 -------------------SKGGAFVHDPKLCGEKEVLAQVKLAFTSTSGHKCVSTRSLQ 98
Query: 121 LSNKNGKDNCATRDTTI------SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNN 174
L+ K + T + ++ R + ++ V + + +E +GVS+AIL+
Sbjct: 99 LTVKKNSRSLKTLEGSLVYNNNGERTVISSRVAQMDEFIPRE--------LGVSRAILDY 150
Query: 175 VIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK 228
VIFCHQ+ S WP+ E +K+ FD+IF+A +Y KA++++K+ R + +E+ ++K
Sbjct: 151 VIFCHQDESLWPMSEPAALKKQFDQIFEAMRYTKAIDNLKVLRKKQGEELAKLK 204
>gi|401826947|ref|XP_003887566.1| Rad50-like protein [Encephalitozoon hellem ATCC 50504]
gi|392998572|gb|AFM98585.1| Rad50-like protein [Encephalitozoon hellem ATCC 50504]
Length = 1249
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 156/330 (47%), Gaps = 39/330 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L I GIR+F ++ + F PLTLIVG NG GKTTIIE +K+ T P
Sbjct: 1 MSSLKKLMIRGIRSFSHRESNTLEFYSPLTLIVGANGTGKTTIIESLKYISTGSLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F++DP++ E VKL T + +T+ RS+
Sbjct: 59 -------------------SRGGAFIYDPKVAGLAEVQGSVKLLFTNVHGETMVCTRSMQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L+ + GK T ++ + + GV G + E M GVS ++L N+IFCHQ
Sbjct: 100 LTQRRGKREQKTLESVVWAERDGGGVSGRSGDVDAE----MPQHFGVSSSVLENIIFCHQ 155
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKE 240
E S+WPL E VK+ DEIF + KY KAL+S+K + ++ +IK Q +K
Sbjct: 156 EESTWPLGEPVVVKKKLDEIFASAKYGKALDSLKSSK---KECASDIKMKMQELEFLRKM 212
Query: 241 ADSKKQL----------IYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMS 290
+ K+ L I N K + E+ E+ ++ IN +L E ER ++
Sbjct: 213 KERKECLEARIKSGCASIERNEAKLEAYGNEIRRCEDVVEEINVELRNNEEAERRAYMLR 272
Query: 291 TQYQTKKTERDMIQESCNELESSIKQLFSG 320
+++ K D +E LE + K + SG
Sbjct: 273 NEHEELKRFIDGFKEKALPLEEA-KGILSG 301
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 29/223 (13%)
Query: 1095 NRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQG 1154
+R + +Y +LK E+ DL K L+ +I +H+ K+ +N +++ W Y+G
Sbjct: 1037 SRTVEDYNKCFIELKALELSCLDLDKCIQALDRAIIDFHTSKLEEVNATLKDLWESTYKG 1096
Query: 1155 NDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
+D+D+I I T S ++TYNY+VV K G+E DMR R S+GQ+++A ++IRL +++
Sbjct: 1097 DDVDWIEIK----TESLGQKTYNYKVVFIKGGVELDMRGRSSSGQKMIASILIRLALANS 1152
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
++ D E T +DR + ++LA T SR I
Sbjct: 1153 FASNCNILALD----EPTTNLDRDNI-------ESLAFTLSRV--------------ISR 1187
Query: 1275 ASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDI 1317
+ +FQLIVITHDE+F++ L+ Y ++ R+ G S I
Sbjct: 1188 HKENSDFQLIVITHDEDFVQLLSRDGPEYFYKLNRNENGDSVI 1230
>gi|405123859|gb|AFR98622.1| telomere maintenance protein [Cryptococcus neoformans var. grubii
H99]
Length = 927
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 206/863 (23%), Positives = 367/863 (42%), Gaps = 150/863 (17%)
Query: 542 IDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLF------------- 588
I AE+++L + + A++ +N E K + I+ L + H+ F L
Sbjct: 106 ISAELAVLNRKADSRAKLDLQRNELEGKNSQISTLLKTHEAKFRELVEADIHDVKPEDIE 165
Query: 589 ------------DMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTL----EANV 632
D+I EEN ++L++ S + ++R +E++ K++ ++ + EA +
Sbjct: 166 DKVISAISRKDRDLIQEENGASALNRDYSQVQASLSRAREELAIKKREIHNMQREIEAAI 225
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNS 692
N ++ ++ E +K + D E++ Q + ++ ++
Sbjct: 226 YNVNQPAEGEEVPAEE----------AKDLAEAFDICRSEIETVQRAIMDKQGSRVVWEG 275
Query: 693 YIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
+ ++ C C R + + + ++ KI+++ E ++ +D + ++S
Sbjct: 276 LLTTVKTG-GVCEACNRGIKHEEK-NAVTRHMEAKIRQLMEA---EQAGVDAEIEVEKSW 330
Query: 753 QEL-------KPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKE 805
E+ +P I LQ IP L +++ E EE + E+ KT+++ K+
Sbjct: 331 TEILDTLIRVEPHEAKIQDLQRRVIPRLETQIKEGEEKLRSLVKEVDDSKTSIQKLKSAS 390
Query: 806 KTALSLQGDLTLLDQNIRELNTLQRELERQESKI--SGMRSTGVDLDQVLAQQKEKKNEL 863
+ +L+ + +++ E L+ ++R ++++ SG T +++V + E+
Sbjct: 391 RDLQNLKATASYINRLYIEAGDLKANVKRLQTELESSGNSKT---VEEVQKEVDRVSQEI 447
Query: 864 NTFRSKIESGQTRLNSHNE-KLQSLQKQKNDIHSKQLTVQGGAGMLKS-LEDRKCELEGM 921
T + Q L S E K+ +L+ +++I K L + G LK+ L+ RK E E +
Sbjct: 448 KTLSRE----QQALTSEKELKVNALRATQDEIGRKSLHI----GRLKAQLDKRKMEEEAL 499
Query: 922 DSVYQT------ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQL 975
+ T EL++L + V E L + E E +++ Y L
Sbjct: 500 SDMQNTLGALHDELQDLDQTVHAAEAPWKEKNETLGRFRTERANTEKEASTQVRTYQSSL 559
Query: 976 EEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAK---RGVCERTINEINQSI 1032
E++ Y G ++ RE+ +++ K I R E I+ ++ +
Sbjct: 560 GEIEGKHKACQAYVAEGNDRKI---RENEIAMSEIKRQISQSSDLRAALEAEISSLSSEL 616
Query: 1033 ANQSLEEIDLKNNLTLLE-------------------KKEAVAKLNEELKLSEIMISDLT 1073
+ + ++++NL E E+ AK N+E K M+ + T
Sbjct: 617 SKSESLKANIRSNLKYREDGKKIEMVQAELDELDLDSAAESRAKFNKEYKG---MLDEET 673
Query: 1074 KYHHTLENCV-----IKYHSQKMR-----SINRLIREYWTRIYQLKLSEIMISDLTKYHH 1123
+ + ++ + QKM + +E+ ++ + +SE +DL KY
Sbjct: 674 EAQGLMAITQGGLLEMRANRQKMEKSLKMDYKNIDKEHKEQLIKTTISEYANNDLEKYGK 733
Query: 1124 TLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS-EKRRTYNYRVVQ 1182
L+N ++KYHS KM IN I W + YQG DID I I +D S R++YNYRVV
Sbjct: 734 ALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTSTRKSYNYRVVM 793
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVR 1242
KN +E DMR RCSAGQ+VLA +IIRL +++ V+ DE L DR R
Sbjct: 794 VKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDESV---LPLRDRNRADR 850
Query: 1243 IVRDHKALAETFSRNCGIFALDEPTTNLD--------------IKNASDQKNFQLIVITH 1288
SR PTTNLD I+ Q NFQLIVITH
Sbjct: 851 ------------SR---------PTTNLDQENINALAESLAEIIRERRQQANFQLIVITH 889
Query: 1289 DEEFIENLTAIDRA-YVVRIVRD 1310
DE F++ L D Y R+ RD
Sbjct: 890 DEGFLQRLAEQDVVEYYWRVSRD 912
>gi|156100779|ref|XP_001616083.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804957|gb|EDL46356.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1785
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 112/223 (50%), Gaps = 58/223 (26%)
Query: 1114 MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS--- 1170
+I D+ ++++ + +IK+HS KM+ IN IR W R+Y DIDYI I ++ T S
Sbjct: 1597 VIKDICNFYNSFDQAIIKFHSLKMQEINLSIRNLWRRVYNSADIDYIYIKSEAQTESNGK 1656
Query: 1171 -EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFI 1229
++RR+YNYRVV K+ E DM+ RCS+GQ+VL+ +IIRL
Sbjct: 1657 VQQRRSYNYRVVMVKDNCELDMKGRCSSGQKVLSSIIIRL-------------------- 1696
Query: 1230 ENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA-------------- 1275
ALAE+FS CGI ALDEPTTNLD N+
Sbjct: 1697 -------------------ALAESFSIKCGILALDEPTTNLDKSNSKNLASLIANIVDLR 1737
Query: 1276 SDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVR-DHKGLSDI 1317
D FQLI+ITHD F++ L+ VR D +G S I
Sbjct: 1738 KDSSAFQLILITHDTHFVDVLSQYGLTNCFYKVRKDRRGYSTI 1780
Score = 120 bits (300), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 176/361 (48%), Gaps = 47/361 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L+++ I GIR++ ++ + + F P+T+I G NG GK+TIIEC+K + T ++P A
Sbjct: 1 MTTLEKIGIQGIRSYGDEEAQELEFASPITVIYGNNGSGKSTIIECLKMSCTGDFPPNAD 60
Query: 61 SGKNFVHDPRIGKKDEASASSG---KNFVHDPRIG---------KKDETHAIVKLQCTCE 108
GK+F+HDP I K KN+ +D RIG KD+ I +
Sbjct: 61 KGKSFIHDPLISNKMNIRGKINLLLKNY-NDKRIGISRSFTLFYSKDKNKKIKHTFRALD 119
Query: 109 NNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVS 168
N S+++ + G++ D I+ K CL + L+GVS
Sbjct: 120 N--------SIIIKKEEGQE-----DVIITNK-----------CLDINE--HIPKLMGVS 153
Query: 169 KAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK 228
KA+L NVI CH E S WP E K+K+ FDE+F ++K L+ + RK + ++
Sbjct: 154 KALLENVILCHHEESLWPFSESLKIKKKFDELFGDDHFSKILDEF----TKCRKTMNDVL 209
Query: 229 AHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEE-SMKPINEKLVQLTEKERNMS 287
+ L +E KK+ I ++ +Q E + + ++ I E ++ L E+ S
Sbjct: 210 KRKEYELATLRECYGKKKNIALEIRRNEQEIGECQTVMQLDVEQIEESVLILDTLEKKRS 269
Query: 288 VMSTQYQTKKTERDMIQESCNELES--SIKQLFSGDKAELQSKLNLFKINLDEKCSELEN 345
++ + + ++ ++L++ ++K+++ D +EL+ LF+++L KC+ L
Sbjct: 270 LLGKLTSSIDMFFAIHEKFQDDLQNYKALKEIYEEDVSELEDFARLFQMDL-AKCNSLIE 328
Query: 346 Q 346
Q
Sbjct: 329 Q 329
>gi|320580809|gb|EFW95031.1| DNA repair protein RAD50 [Ogataea parapolymorpha DL-1]
Length = 732
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 185/401 (46%), Gaps = 99/401 (24%)
Query: 911 LEDRKCELEGMDSVYQTELEELGRKVAPIE-----------TQLNLAQSELDALKKEHKK 959
+E R +L Y T + E GR E + L Q+ LDAL E+
Sbjct: 328 IESRSAQLARAREEYNTSVREEGRLRGLFERHEQNRSEKQRLEQQLDQTRLDALAAEYAD 387
Query: 960 KLNEEGAKIQDYTKQLEEVK-------------RIKLEILNYTKRGTLTQLAALRESVQK 1006
K A ++D +L +K R ++ L TKR Q+ +L S Q
Sbjct: 388 KEAAHKAALEDVEFELTTLKEELAREAQHAEYVRNDVDALE-TKRAKFQQILSLSSSNQA 446
Query: 1007 LNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSE 1066
+R ERT +A + LE L+++ L E +A+ ++++ E
Sbjct: 447 RLER-----------ERT------ELAAEELELQQLRDSSPLAAINEKIAQTEKQIRQLE 489
Query: 1067 IMI--------SDLTKYHHTLENCVIKYHSQK-MRSIN-RLIREYWTRIYQLKLSEIMIS 1116
+ ++T+ +++ +K+ Q+ + I+ R +EY + Q KLS M++
Sbjct: 490 TQLQSEYSTKLGEMTQLSRQIQS--VKHELQRDYKDIDERYTKEYAS--LQTKLS--MVT 543
Query: 1117 DLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV--GTGSEKRR 1174
DLT Y+ +++ V+++H KM+ INR+I E W + Y GND+D I + AD + + R
Sbjct: 544 DLTTYYKAIDSAVMEFHQVKMKEINRIIDELWKKTYMGNDVDSIMVRADPIKSSTAATMR 603
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------------- 1213
+YNYRVV KNG E DMR RCSAGQRVLA LIIRL +++
Sbjct: 604 SYNYRVVMVKNGTELDMRGRCSAGQRVLAALIIRLALAECFGLNFGMIALDEPTTNLDDD 663
Query: 1214 ------------------QKNFQLIVITHDEEFIENLTAID 1236
Q+NFQLIVITHDE+F+ + A+D
Sbjct: 664 NIESLAKALANIIQERATQRNFQLIVITHDEKFLRAMNAVD 704
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 25/216 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA + +L + G+R+F D + ++F+RPLTLIVG NG GKTTIIE +++A T + P +
Sbjct: 1 MASIYKLSVSGVRSFSGDTHETIQFERPLTLIVGANGSGKTTIIEALRYATTGDLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
+G FV+DP + ET A VKL N ++ + +SL
Sbjct: 61 NGA---------------------FVNDPSMTGATETKAQVKLAFQNVNRTSMVLTKSLA 99
Query: 120 -LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ + G + TR+ + G ++ + + + +GVS+A+LN VIFC
Sbjct: 100 AFKNARTGTTSFKTRENQLV--AIHNGEKQTVTSKMADIETAVPQQLGVSRAVLNYVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
HQ+ S WP+ + +K+ FDEIFD+ K+ K LE+ +
Sbjct: 158 HQDESLWPISDSASLKKRFDEIFDSVKFIKVLETFR 193
>gi|403162315|ref|XP_003322557.2| hypothetical protein PGTG_04094 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172554|gb|EFP78138.2| hypothetical protein PGTG_04094 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1359
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 120/219 (54%), Gaps = 27/219 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
++ +D+L I GIR+F V++F PLT+IVG NG GKTTIIE +K+ T + P
Sbjct: 54 LSQIDKLAIRGIRSFDNQSIAVIQFYSPLTVIVGHNGSGKTTIIESLKYITTGDLPPNTK 113
Query: 61 SGKNFVHDPRIGKKDEASAS---SGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G FVHDP I + A KN I + +LQ + + N T ++
Sbjct: 114 GGA-FVHDPSIAGESVVMAEVLLRFKNLAGAKLIASR-------RLQVSKKKN-TALTMK 164
Query: 118 SLLLSNKNGKDNCA--TRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+L + D+ A ++ TIS K C + +S E+ +G+SKAIL NV
Sbjct: 165 TLEGTLSYNDDSSAPNSKRRTISTK-----------CAEMDS--EVPRHLGISKAILENV 211
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
IFCHQE S+WPL E +K+ FDEIF+ATKY KAL++IK
Sbjct: 212 IFCHQEESNWPLSEPASLKKKFDEIFEATKYTKALDNIK 250
>gi|310790058|gb|EFQ25591.1| hypothetical protein GLRG_00735 [Glomerella graminicola M1.001]
Length = 1307
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 173/672 (25%), Positives = 306/672 (45%), Gaps = 114/672 (16%)
Query: 697 LEENEPRCPLCTRFFESDYSVPG------LVNKLKTKIKEIPEQT-NNKKTHIDQLCKQQ 749
LE+N +C LC R F+ +V L+ L KE E+ N +D
Sbjct: 680 LEKN--KCRLCDRSFDDKSNVAKSRFSDKLIKFLDPNKKEKAEEDLANSTALLD------ 731
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTAL 809
SL+++K YE +L ++PS++ ++ LE + EL++ + + K
Sbjct: 732 -SLRKVKAQYETYQRLM-AELPSVKEEVASLEYECETLERELEEHDAIVGAEEGKLTDIE 789
Query: 810 SLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV---DLDQVLAQQKEKKNELNTF 866
SL + + Q ++++ R+ E Q +I +S+G +D++ Q ++ +
Sbjct: 790 SLNKTVISITQALKDI----RDSEAQVDRIMTQQSSGTVSRSVDEIHELQALCNEQIRSM 845
Query: 867 RSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM--DSV 924
++KI + +++ SL+ +K+++ + + L+ +D + +++ + D V
Sbjct: 846 KNKISKTTSDRQRMKDQINSLELEKSELRN---NLSKALNQLERKKDFQNQIQTLKEDQV 902
Query: 925 YQTELE-ELGRKVAPIETQLNLAQS-ELDALKKEHKKK--LNEEGAKIQDYTKQLEEVKR 980
+Q +L +++ IE ++ A+S D L++ K+ + EE K+ D + E+K
Sbjct: 903 HQRDLIIRADQELESIEPEIAEARSVRDDTLQRGRAKEQAIAEERDKVAD---SVTELKM 959
Query: 981 IKLEILNYTKRGTLTQLAA-------LRESVQKLNQRKEDIIAKRGVCERTINEINQSIA 1033
++ +I +Y RG + LAA L +S+ L++ D+ + N++ Q I
Sbjct: 960 VENDIQDYIDRGGPSNLAANQRAIASLEKSIASLDKEISDLTVR-------TNKLKQDID 1012
Query: 1034 NQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1093
N ++ ++ NNL + + + L +++ E+ D + + TL I Q
Sbjct: 1013 NGDRKKQNISNNLKYRQNLQQLEILRRDIE--ELESRDADEDYRTL----ITEAKQLENR 1066
Query: 1094 INRLIREYWTRIYQLKL--------------------------------SEIMISDLTKY 1121
NRL+ + + + Q+K ++ I DL +Y
Sbjct: 1067 HNRLVADRGSIMGQMKTKDEELERLLLEWEQEYKSAAKKYRESHIKVETTKAAIEDLGRY 1126
Query: 1122 HHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVV 1181
L+ +++YHS KM +NR+ E W YQG DID I I +D + RR+YNYRV
Sbjct: 1127 ISALDTAIMRYHSLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNENATTGRRSYNYRVC 1186
Query: 1182 QKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVV 1241
K E DMR RCSAGQ+VLA +IIRL +++ +I DE T +D+ +
Sbjct: 1187 MVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEP----TTNLDKDNI- 1241
Query: 1242 RIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDR 1301
K+LAE+ + A+ IK Q NFQLIVITHDEEF+ ++ D
Sbjct: 1242 ------KSLAES------LHAI--------IKARQAQSNFQLIVITHDEEFLRHMRCNDF 1281
Query: 1302 A-YVVRIVRDHK 1312
R+ RD K
Sbjct: 1282 CDSFFRVRRDDK 1293
>gi|209881510|ref|XP_002142193.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557799|gb|EEA07844.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 1092
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 47/256 (18%)
Query: 1079 LENC---VIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQ 1135
LE C +I+Y + +L EY I++L + I++ DL KY L+ ++K+H+
Sbjct: 859 LEKCKEDMIRYSP-----LEKLSYEYKQNIFKLNVISIIVDDLEKYQWALQKALMKFHAT 913
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE-------------KRRTYNYRVVQ 1182
KM+ INR I+E W Y+G DIDYI+I +DV E +++NYRVV
Sbjct: 914 KMKEINRTIKELWKVTYKGRDIDYIAIRSDVDNDQEDDAKLSVSSKSVSSTKSFNYRVVM 973
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVR 1242
+ G+E DM+ RCSAGQRVLAC++IRL +++ ++ DE T +DR +
Sbjct: 974 VQKGVELDMKGRCSAGQRVLACILIRLALAESFCVNCGILALDEP----TTNLDRDNI-- 1027
Query: 1243 IVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA 1302
+ LA S IK Q+NFQLI+ITHDEEF+ +
Sbjct: 1028 -----EGLANALSYL--------------IKYRKSQQNFQLILITHDEEFVRIMAHAQHC 1068
Query: 1303 -YVVRIVRDHKGLSDI 1317
+ +IV+D G S I
Sbjct: 1069 NHFYKIVKDDDGYSTI 1084
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 24/221 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L++L I GIR+F D+ ++F P+TLIVG NG GKTTIIEC+K ++T + P
Sbjct: 1 MSSLEKLIISGIRSFTPDRREAIQFDHPITLIVGPNGSGKTTIIECLKVSVTGDLPPNVK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS-- 118
SG+NFVHDP++ +D + I K + + Q + N + + +S
Sbjct: 61 SGQNFVHDPKL--RDSPDTKGQVRLIFRDSIKNK-KIQIVRSFQLSYIKNKKLGINQSDP 117
Query: 119 ------LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAIL 172
+L S KD+ +IS K Q + L G+S AI+
Sbjct: 118 IKTQFRVLESVLQTKDDETGEIASISHKCVDINNQ-------------VPKLFGISPAII 164
Query: 173 NNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
NVIFCHQE+S+WPL + K+K+ FD++F AT+++K+L++
Sbjct: 165 ENVIFCHQEDSNWPLQDTAKIKKKFDDLFGATRFSKSLDTF 205
>gi|294892700|ref|XP_002774190.1| RAD50 DNA repair protein, putative [Perkinsus marinus ATCC 50983]
gi|239879407|gb|EER06006.1| RAD50 DNA repair protein, putative [Perkinsus marinus ATCC 50983]
Length = 548
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 251/577 (43%), Gaps = 138/577 (23%)
Query: 791 LKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLD 850
+K+ + ALE +T+E+ A L QN R++ L+ E K S + T +
Sbjct: 5 VKESRRALEACRTEEERAEQELARRESLCQNQRQV------LQSLEFKSSTLERTKANSG 58
Query: 851 QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG---M 907
Q+L++ KE + E++ KI S + N S + Q+ + ++L ++ G +
Sbjct: 59 QMLSEAKETEREISEVERKIAS------TSNNAEASARLQEIEQALRKLMIEKGENQREL 112
Query: 908 LKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSE---LDALKKEHKKKL--- 961
++LE + DS TE E L R V + + +E LD+ +++
Sbjct: 113 ARALE--SVQRLNQDSGVATEAEVLSRNVESLRLTMQRIITENPGLDSTSPRDAEQILHR 170
Query: 962 NEEGAKIQDYT---KQLEEVK-------RIKLEILNYTKRGTLT----QLAALRESVQK- 1006
+ E A+ Q + KQ E + R++LE RG L QL+ +E+ ++
Sbjct: 171 SIEAARAQKDSAGAKQKEAISTRAAASARVELE------RGQLKDAEDQLSIYQEAAERS 224
Query: 1007 LNQRKEDIIAKRGVCE-------RTINEINQSIANQSLEE------------------ID 1041
E++ KRG CE R E+ Q+I +SL+ +D
Sbjct: 225 ATDTVEELRTKRGQCEGELREKERCREEVVQNIRLKSLQRELSEFEQEVETLQQEYGVVD 284
Query: 1042 LKNNLTLLEK-KEAVAKLNEELKLSEIMISDLT----KYHHTLENCVIKYHSQKMRSINR 1096
+E + AV L E E +S L H L++ + K + RS
Sbjct: 285 FAGKAKQVEDLRSAVLSLREHKSRIEGKVSQLVDQQRAVSHQLDSSLYKNIDDRHRSA-- 342
Query: 1097 LIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGND 1156
+ Q ++S + DL++YH L+ +++YH KM INR+IRE W ++Y+G D
Sbjct: 343 --------LIQHEVSAMATQDLSRYHSALDKALMRYHVSKMMEINRVIRELWQQVYRGRD 394
Query: 1157 IDYISIAADVGTGSE------KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLF 1210
IDYI+I +D G+ + R+YNYRVV G+E DMR RCSAGQRVLA LIIRL
Sbjct: 395 IDYIAIRSDTEDGAANVTSATRLRSYNYRVVMTCQGVEVDMRGRCSAGQRVLASLIIRLA 454
Query: 1211 ISD---------------------------------------QKNFQLIVITHDEEFIEN 1231
+++ NFQL++ITHDEEF+
Sbjct: 455 LAESFCCNCGILALDEPTTNLDSTNIEGLADALADLIETRRNSSNFQLLLITHDEEFVRK 514
Query: 1232 LTA-----IDRAYVVRIVRDHKALAETFSRNCGIFAL 1263
L D Y R+ +D++ +F R C + L
Sbjct: 515 LVTGPTHPCD--YYYRVAKDNEGF--SFIRQCNVIDL 547
>gi|307175801|gb|EFN65619.1| Putative uncharacterized transposon-derived protein F52C9.6
[Camponotus floridanus]
Length = 184
Score = 137 bits (344), Expect = 6e-29, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 1319 LRSLLSSRLLSRNSKLTLYNTIIKPVLLYGSETWSVTKREEHQMQVFENKVYRTIFGPYF 1378
+ LL SR+LS+ K+ +Y TII PV+LYGSETWS+T ++E + +VFENK+ R I G
Sbjct: 16 VNKLLGSRVLSKRLKIRIYRTIILPVVLYGSETWSLTLKDEKKFRVFENKILRKIMGAKR 75
Query: 1379 DHQTQSWKRRHNSDIHALSKQPNIVATMNTNRLRWLGHLMRIDKNRAVWKIFTNTPHQGK 1438
D +T W++ HN ++H L P+I+ + + RLRW GH+ R+ ++R +KI P+ GK
Sbjct: 76 DEETGEWRKIHNVELHRLYNSPDIINVIKSRRLRWAGHVARMSEDRTAYKILMGKPN-GK 134
Query: 1439 RLPGRPRSCWINEMKRLCNRWGLN--DWEELTQHRVLWRQAVWFSRN 1483
R GRPR W + ++ N G +W++L Q R WR V+ + N
Sbjct: 135 RPLGRPRRRWEDNIRMDLNEMGYEGREWKDLAQGREHWRDLVFAAMN 181
>gi|340897447|gb|EGS17037.1| hypothetical protein CTHT_0073630 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1315
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 182/365 (49%), Gaps = 42/365 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +++L I+G+R+F + F PLTLIVG NG GKTT+IEC+K+A T E P ++
Sbjct: 1 MSKIEKLSILGVRSFGPHHPETIAFNTPLTLIVGYNGSGKTTVIECLKYATTGELPPNST 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
F+HDP + +G+K E A VKL ++ V R++
Sbjct: 61 RNGAFIHDPDL-------------------VGEK-EVRAQVKLSFRSTIGESYVVTRNIQ 100
Query: 120 LLSNKNGKDNCATRDTTI------SRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILN 173
LL +N K T + ++ R + +T V + L L E +GV AIL+
Sbjct: 101 LLVQRNNKRTQKTLEGSLLLRNNGERTVISTRVAE-LDKLVSEK-------LGVPPAILD 152
Query: 174 NVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQA 233
VIFCHQ++S WP+ E +K+ FDEIF+A KY K +E+I++ + + E+ +K
Sbjct: 153 AVIFCHQDDSLWPMSEPAALKKRFDEIFEAQKYTKVIENIRLLKKKKGDELKILKEREVQ 212
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
K+ A+ +L+ T++ ++ E+ + + + M+ + K+ E+ + +
Sbjct: 213 DKANKERAEKVDRLMAQLTREILEAREKCNELSKQMEEESAKIKDKYEQANSFLKIMNDL 272
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKA------ELQSKLNLFKINLDEKCSELEN-Q 346
QTK + + +++ EL S I++L D+ E + +N + D K ++ + Q
Sbjct: 273 QTKTEKLEYKKDAIVELRSRIEELPDPDEVLRNTLDEYEQTINRIVADRDHKAAQFHDLQ 332
Query: 347 ERLKS 351
LKS
Sbjct: 333 AELKS 337
>gi|443726522|gb|ELU13642.1| hypothetical protein CAPTEDRAFT_122168 [Capitella teleta]
Length = 219
Score = 136 bits (343), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 25/214 (11%)
Query: 2 ALLDQLHIMGIRNFPADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
A L++L I GIR+F + N+ V P+TLI+G NG GKTTIIE +++ T ++P G
Sbjct: 3 ACLEKLDISGIRSFSPELNQGSVELMTPVTLILGPNGTGKTTIIESLRYVTTGQFPPG-- 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G FVHDP+I + E A V+L+ CV RSL+
Sbjct: 61 -------------------SKGAGFVHDPKIAHETEVKAQVRLRFRNTQGLASCVTRSLI 101
Query: 121 LSNKNGKDNCATRDTTIS-RKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
+ K + D R + + CLQ + EM +GVS+AIL+NVIFCH
Sbjct: 102 ATQKPKGVTVRSLDGVFQMRALNGEKAAISSKCLQLDR--EMVAHLGVSRAILDNVIFCH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
QE+S+WPL E K++K+ F++IF T+Y KAL++I
Sbjct: 160 QEDSNWPLGESKQLKQKFEDIFACTRYAKALDNI 193
>gi|389584754|dbj|GAB67486.1| DNA repair protein RAD50 [Plasmodium cynomolgi strain B]
Length = 1784
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 119/233 (51%), Gaps = 58/233 (24%)
Query: 1104 RIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIA 1163
+I ++ + + +I D+ ++++ + +IK+HS KM+ IN IR W R+Y DIDYI I
Sbjct: 1586 KIIEIFVYKNVIKDICNFYNSFDQAIIKFHSLKMQEINLSIRNLWRRVYNSADIDYIYIK 1645
Query: 1164 ADVGTGS----EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
++V T + +RR+YNYRVV K+ E DM+ RCS+GQ+VL+ +IIRL
Sbjct: 1646 SEVQTENNGKVNQRRSYNYRVVMVKDNCELDMKGRCSSGQKVLSSIIIRL---------- 1695
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA---- 1275
ALAE+FS CGI ALDEPTTNLD N+
Sbjct: 1696 -----------------------------ALAESFSIKCGILALDEPTTNLDKSNSKNLA 1726
Query: 1276 ----------SDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDI 1317
D FQLI+ITHD F++ L+ R+ ++ +G S I
Sbjct: 1727 SLIANIVDLRKDSSAFQLILITHDTHFVDVLSQYGLTNCFYRVRKNQRGYSTI 1779
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 37/387 (9%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L+++ I GIR++ ++ + + F P+T+I G NG GK+TIIEC+K + T ++P A
Sbjct: 1 MTTLEKIGIQGIRSYGDEEAQELEFASPITVIYGNNGSGKSTIIECLKMSCTGDFPPNAD 60
Query: 61 SGKNFVHDPRIGKKDEASASSG---KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
GK+F+HDP I K KN+ ++ RIG + + C +N T R
Sbjct: 61 KGKSFIHDPLISNKMNVKGKINLLLKNY-NNKRIGI---SRSFSLFYCKDKNKKTKHSFR 116
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
+L + K+ D I+ K C+ + L+GVSKA+L NVI
Sbjct: 117 ALDNNIIIKKEKEGQNDVIITNK-----------CIDINE--HIPKLMGVSKALLENVIL 163
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNY 237
CH E S WP E K+K+ FDE+F ++K L+ + RK I ++ + L
Sbjct: 164 CHHEESLWPFSESVKIKKKFDELFGDDHFSKILDEFT----KCRKTINDVLKRKEYELAT 219
Query: 238 KKEADSKKQLIYNNTQKRDQSFEELHNIEESMK-PINEKLVQLTEKERNMSVMSTQYQTK 296
KE KK+ I + Q+ +Q E I + K I E + L E+ S + +
Sbjct: 220 LKECYDKKKKIALDIQRNEQEIGECQTIMQLDKEEIEESFLILNTLEKKKSSLGKITSSI 279
Query: 297 KTERDMIQESCNELES--SIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYI 354
+ ++ ++L++ ++K+++ D +EL+ LF+ +L KC+ L E++ +++
Sbjct: 280 DMYFAIHEKFQDDLQNYKTVKEIYEEDASELEHFAQLFQEDL-AKCNSL--IEQVSNEFA 336
Query: 355 QEEKQSHTHI---NEAQMKLGKLERDE 378
EKQ+ I +EA +K +RDE
Sbjct: 337 LLEKQTCLPIRSCDEADVK----QRDE 359
>gi|429327275|gb|AFZ79035.1| DNA repair protein rad50, putative [Babesia equi]
Length = 1123
Score = 136 bits (342), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 174/357 (48%), Gaps = 56/357 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L+ L + GIR+F DK + F++PLTLIVG NG GKTT+IEC+K + P +
Sbjct: 1 MTTLNSLEVQGIRSFSPDKLECLYFEKPLTLIVGHNGSGKTTLIECLKAVTSGILPPNSD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
GK FV+D R+ +E +KL T NN+ V V RS
Sbjct: 61 KGKCFVYDYRLNNSNEVRGH--------------------IKLSFTTFNNEKVSVSRSYS 100
Query: 121 LSNK---------NGKDNCATRDTTISRKIFATGVQ-KNLGCLQQESV---LEMCNLIGV 167
++ G +N + + I+ +Q + C+ ++ L + +L+G
Sbjct: 101 IAGDKYNHKKTTFKGTENILEVELHNGKVIYDNHIQIQQKRCVTMKTTDIDLTLPSLMGF 160
Query: 168 SKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----KIQRDRLRKE 223
++AI++NVIFCHQ+ ++WPLD+ KVK FD++ + ++Y KAL I K Q D +R +
Sbjct: 161 TRAIIDNVIFCHQDENNWPLDDLAKVKARFDDLLETSRYTKALVVINKAKKEQEDVIRNK 220
Query: 224 IPEIKAHYQATLNYKKEADSKKQLIYNNTQKRD--QSFEELHNIEESMKPINEKLVQLTE 281
+++ + L AD KKQL + K D ++ E+ +E S+K E L L
Sbjct: 221 QKQLEIYKSQILQI---ADIKKQL---DNDKDDIIKTKLEIEALENSLKQSTEILTTLKS 274
Query: 282 KERNMSVMSTQYQT-------KKTERDMIQESCNEL--ES--SIKQLFSGDKAELQS 327
K ++ +Y+ K E D + ES E+ ES IKQ + AEL++
Sbjct: 275 KYDKIASNLDEYRNTEGFYLKTKEEHDKLHESLAEIYEESLDDIKQYHATLTAELRT 331
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 148/306 (48%), Gaps = 88/306 (28%)
Query: 1022 ERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEE-----LKLSEIMISDLTKYH 1076
E ++EI + I Q+++ +D + + K+N E LK++ + LTK
Sbjct: 855 EEKLHEIKKQIGEQNIDGLDFE-----------ITKMNRECAEITLKIATLNGMVLTKEE 903
Query: 1077 HT------LENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVI 1130
H LE+ IK ++QKM Y +LK + DL +Y LE+ +
Sbjct: 904 HVDKLNTLLESKSIK-NAQKM---------YTETCIELKSHHMTKEDLERYSKVLESGLH 953
Query: 1131 KYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTG---SE-KRRTYNYRVVQK-KN 1185
KYHS+K+ IN +++ W +Y GN IDYI+I ++V SE ++YNYR++ +N
Sbjct: 954 KYHSEKIDYINNVLKRVWRDVYSGNYIDYIAIQSNVDENISLSELTSKSYNYRIIMVLQN 1013
Query: 1186 GIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVR 1245
G++ DM+ CSAG+R+L+ LIIR+
Sbjct: 1014 GMKMDMKGHCSAGERILSSLIIRI------------------------------------ 1037
Query: 1246 DHKALAETFSRNCGIFALDEPTTNLDIKNASDQK------------NFQLIVITHDEEFI 1293
AL E+FS NCGI ALDEPTTNLD +N + NFQLI+ITHDEEF
Sbjct: 1038 ---ALIESFSENCGILALDEPTTNLDKENIRSLELSLSKLVNESFHNFQLIIITHDEEFA 1094
Query: 1294 ENLTAI 1299
+ + +
Sbjct: 1095 KRMATL 1100
>gi|221058216|ref|XP_002261616.1| DNA repair protein RAD50 [Plasmodium knowlesi strain H]
gi|194247621|emb|CAQ41021.1| DNA repair protein RAD50, putative [Plasmodium knowlesi strain H]
Length = 1804
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 57/217 (26%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
++Y ++ ++ + +I D+ ++++ + +IK+HS KM+ IN IR W R+Y DID
Sbjct: 1601 KKYREKVIEIFVYRSVIGDICNFYNSFDQAIIKFHSLKMQEINLSIRNLWRRVYNSADID 1660
Query: 1159 YISIAADVGTGS----EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
YI I +++ T + +RR+YNYRVV K+ E DMR RCS+GQ+VL+ +IIRL
Sbjct: 1661 YIYIKSEIQTENNGKVHQRRSYNYRVVMVKDNCELDMRGRCSSGQKVLSSIIIRL----- 1715
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
ALAE+FS CGI ALDEPTTNLD N
Sbjct: 1716 ----------------------------------ALAESFSIRCGILALDEPTTNLDKSN 1741
Query: 1275 A--------------SDQKNFQLIVITHDEEFIENLT 1297
+ + FQLI+ITHD F++ L+
Sbjct: 1742 SKNLAALIANIVDLRKESSAFQLILITHDTHFVDVLS 1778
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 200/414 (48%), Gaps = 59/414 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L+++ I GIR++ ++ + + F P+T+I G NG GK+TIIEC+K + T ++P A
Sbjct: 1 MTTLEKIGIQGIRSYGDEEAQELEFASPITVIYGNNGSGKSTIIECLKVSCTGDFPPNAD 60
Query: 61 SGKNFVHDPRIGKKDEASASSG---KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
GK+F+HDP I K + +N+ ++ RIG + + C N R
Sbjct: 61 KGKSFIHDPLISNKMNSRGKINLLLRNY-NNKRIGI---SRSFSLFYCKDRNKKMKHTFR 116
Query: 118 SL----LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILN 173
+L ++ G+D D I+ K CL + L+GVSKA+L
Sbjct: 117 ALDNNIIIKKGEGQD-----DVIITNK-----------CLDINE--HIPKLMGVSKALLE 158
Query: 174 NVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----KIQRDRLRKEIPEIKA 229
NVI CH E S WP E K+K+ FDE+F ++K L+ K+ D L+K K
Sbjct: 159 NVILCHHEESLWPFSESVKIKKKFDELFGDDHFSKILDEFTKCRKVMNDELKK-----KE 213
Query: 230 HYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMK-PINEKLVQLTEKERNMSV 288
+ ATL KE +++ I + Q+ +Q EE I + K I L+ L E S+
Sbjct: 214 YELATL---KECYDRRKNIALDIQRNEQEIEECQTIIQLDKDKIEGSLLILNTLEGKKSL 270
Query: 289 MSTQYQTKKTERDMIQESCNELES--SIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ 346
+ + + + ++LE+ S+++++ D +EL+ +LF+ +L KC+ L
Sbjct: 271 LRKLTSSIDMYFAVQGKFLDDLENYKSVEEIYEEDASELEHFADLFQRDL-AKCNFL--I 327
Query: 347 ERLKSQYIQEEKQSHTHIN---EAQMK--------LGKLERD-EETHKKLNDTL 388
E+ +++ EKQ+ IN EA +K L LE+ EE H + D L
Sbjct: 328 EQASNEFALLEKQTSLPINSCDEADIKQRDEICSNLFHLEKQREEAHTLIKDIL 381
>gi|307179238|gb|EFN67634.1| Putative uncharacterized transposon-derived protein F52C9.6
[Camponotus floridanus]
Length = 179
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Query: 1322 LLSSRLLSRNSKLTLYNTIIKPVLLYGSETWSVTKREEHQMQVFENKVYRTIFGPYFDHQ 1381
LL SR+LS+ K+ +Y TII PV+LYGSETWS+T ++E + +VFENK+ R I G D +
Sbjct: 19 LLGSRVLSKRLKIRIYRTIILPVVLYGSETWSLTLKDEKKFRVFENKILRKIMGAKRDEE 78
Query: 1382 TQSWKRRHNSDIHALSKQPNIVATMNTNRLRWLGHLMRIDKNRAVWKIFTNTPHQGKRLP 1441
T W++ HN ++H L P+I+ + + RLRW GH+ R+ ++R +KI P+ GKR
Sbjct: 79 TGEWRKIHNVELHRLYNSPDIINVIKSRRLRWAGHVARMSEDRTAYKILMGKPN-GKRPL 137
Query: 1442 GRPRSCWINEMKRLCNRWGL--NDWEELTQHRVLWRQAV 1478
GRPR W + ++ N G +W++L Q R WR V
Sbjct: 138 GRPRRRWEDNIRMDLNEMGYEGREWKDLAQGREHWRDLV 176
>gi|198413452|ref|XP_002120395.1| PREDICTED: similar to RAD50 homolog, partial [Ciona intestinalis]
Length = 438
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 170/368 (46%), Gaps = 73/368 (19%)
Query: 934 RKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGT 993
R +AP+ ++ +S+ + + K+ + +Q +L+E++R+ I N+ K
Sbjct: 39 RSIAPLVREVENLESKKKKVAISNNDKITKARDVLQTLQNKLKELERVNKNIDNFNKSSV 98
Query: 994 LTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL----- 1048
T+L + +++L + D K I + + IA + + DL++N L
Sbjct: 99 PTKLQRTSKEIEELESKIVDFENKMKKLRTDIARLQKEIATCTDRQRDLEDNSALRERNR 158
Query: 1049 ---------LEKKEAVAKLNEELKLSEIMISDLTKYHHTL----ENCVIKYHS--QKMRS 1093
LE +E + +N SE+ LTK H L E C ++ S + +RS
Sbjct: 159 EIEDVRKKLLEMEEKLGGMNAAKLDSEV--RQLTKEHSDLTKEKERCKVRQESLGENVRS 216
Query: 1094 INR-LIRE--------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLI 1144
+ + L RE Y + E+ I DL KY+ L+ V+KYH KM IN++I
Sbjct: 217 LQQELSRENFKFADKRYKDCLVSATTLELAIGDLDKYYKALDRAVMKYHQIKMDEINKII 276
Query: 1145 REYWTRIYQGNDIDYISIAA--DVGTGSEKRRTYNYRVVQK-KNGIEQDMRNRCSAGQRV 1201
RE W Y+G DI+YI I + D G + RRT+NYRVV +G DMR RCSAGQ+V
Sbjct: 277 RELWQETYKGRDIEYIQICSSEDTGGSTAARRTFNYRVVMYCYSGTPMDMRGRCSAGQKV 336
Query: 1202 LACLIIRLFI---------------------------------------SDQKNFQLIVI 1222
LA L+IRL + S Q+NFQL+VI
Sbjct: 337 LASLVIRLALAETFCINCGILALDEPTTNLDRPNVLSLAEALLSIIQSRSQQRNFQLVVI 396
Query: 1223 THDEEFIE 1230
THDEEF+E
Sbjct: 397 THDEEFVE 404
>gi|402587270|gb|EJW81205.1| hypothetical protein WUBG_07886, partial [Wuchereria bancrofti]
Length = 513
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 120/230 (52%), Gaps = 35/230 (15%)
Query: 1 MALLDQLHIMGIRNF---PADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
M+LLD + + G+R+ P + N V+ F PLT+I G NG GKTTIIE +K+ T E P+
Sbjct: 9 MSLLDTIELQGVRSVGVGPQNAN-VIEFLSPLTIICGPNGAGKTTIIEALKYVTTGELPK 67
Query: 58 GASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G S + F+HD R+ + A VKL+ + V R
Sbjct: 68 G----------------------SFQTFIHDMRLADRSRVDASVKLKFKDIRGRSCVVTR 105
Query: 118 SLLLS-NKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
++ S GK + ++TI+ + +G K+L + E+ NL+G+ AIL V+
Sbjct: 106 RIMQSKGAKGKITNKSEESTIAIE-KESGEWKSLSSKVVDCKKEILNLLGLPTAILEYVV 164
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPE 226
FCHQE SSWPLDE KK+KE FDEIF T Y KA+E LRKE E
Sbjct: 165 FCHQEESSWPLDEPKKLKERFDEIFQVTGYVKAIEV-------LRKEFKE 207
>gi|380491100|emb|CCF35557.1| DNA repair protein RAD50, partial [Colletotrichum higginsianum]
Length = 778
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 179/707 (25%), Positives = 319/707 (45%), Gaps = 126/707 (17%)
Query: 672 ELKREQEEVSMMTSTQYLFNS----YIG--KLEENEPRCPLCTRFFESDYSVPG------ 719
E+K +E+V T+ L ++ Y G K+ + + +C LC R F+ +V
Sbjct: 118 EVKMHEEDVETYTTDISLLDALADYYRGCQKMLQEKNKCRLCDRVFDDKSNVSKSRFSDK 177
Query: 720 LVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIE 779
LV L KE E+ T + +L+++K YE +L ++PS++ ++
Sbjct: 178 LVKFLDPNKKEKAEEDLANSTAL------LNALRKVKKQYETYQRLM-AELPSVKEEVAS 230
Query: 780 LEENVIETKG-ELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELER---Q 835
LE ET G +L++ + + K SL + + Q ++++ + +++R Q
Sbjct: 231 LEAE-FETLGRQLEEHDAVVSAEEGKLNDIESLNKTVINITQAVKDIKDSEAQVDRIMSQ 289
Query: 836 ESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIH 895
+S + RS D+ ++ A E+ SK S + R+ +++ +L+ +K+++
Sbjct: 290 QSSGTVSRSAD-DIHELQASCNEQIRSTKNKLSKTTSDRQRMK---DQVNALELEKSELR 345
Query: 896 SKQLTVQGGAGMLKSLEDRKCELEGM--DSVYQTEL-EELGRKVAPIETQLNLAQS-ELD 951
+K + L+ +D + +++ + D +Q EL + +++ IE ++ A+S D
Sbjct: 346 NK---LSKALNQLERKKDFQNQIQTLKEDQAHQRELISQADQELESIEPEIAEARSIRDD 402
Query: 952 ALKKEHKKK--LNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA-------LRE 1002
L++ K+ + EE K+ D + E+K ++ +I +Y RG + LAA L +
Sbjct: 403 TLQRGRAKEQAIAEERDKVAD---SVTELKMVESDIRDYIDRGGPSNLAANQRAIASLEK 459
Query: 1003 SVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEEL 1062
S+ L++ D+ + N++ Q I N ++ ++ NNL K + L
Sbjct: 460 SIAALDKEISDLTVR-------TNKLKQDIDNGDRKKQNISNNL----------KYRQNL 502
Query: 1063 KLSEIMISDLTKYHHTLENCVIKYHSQKMRSI----NRLIREYWTRIYQLKL-------- 1110
+ EI+ D+ + + K + R + NRL+ + + + Q+K
Sbjct: 503 QQLEILRRDIEELESRDADEDYKSLITEARQLENRHNRLVADRGSIMGQMKTKDEELERL 562
Query: 1111 ------------------------SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE 1146
++ I DL +Y L+ +++YHS KM +NR+ E
Sbjct: 563 LLEWEQEYKSAAKKYRESHIKVETTKAAIEDLGRYISALDTAIMRYHSLKMEEVNRIAGE 622
Query: 1147 YWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLI 1206
W YQG DID I I +D + RR+YNYRV K E DMR RCSAGQ+VLA +I
Sbjct: 623 LWQSTYQGTDIDTILIRSDNENATTGRRSYNYRVCMVKQDTEMDMRGRCSAGQKVLASII 682
Query: 1207 IRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEP 1266
IRL +++ +I DE T +D+ + K+LAE+ I +
Sbjct: 683 IRLALAESFGVNCGLIALDEP----TTNLDKDNI-------KSLAESLH---AIIKARQA 728
Query: 1267 TTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1312
+N FQLIVITHDEEF+ ++ D R+ RD K
Sbjct: 729 QSN-----------FQLIVITHDEEFLRHMRCSDFCDSFFRVRRDDK 764
>gi|323455275|gb|EGB11144.1| hypothetical protein AURANDRAFT_22479, partial [Aureococcus
anophagefferens]
Length = 211
Score = 135 bits (339), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 126/229 (55%), Gaps = 28/229 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA +++L I GIR F ++ + FQ PLT+IVG NGCGKTT+IE + T P G++
Sbjct: 1 MACIEKLAIRGIRAFSPEREEAIEFQTPLTMIVGANGCGKTTVIE---YGTTGCAPPGSN 57
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SG+ FVH DP++ E A +KL+ + VVRS+
Sbjct: 58 SGRAFVH--------------------DPKVSGVTEVKAQLKLRFKNYAGQRMVVVRSMQ 97
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNL--GCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ + D I R A+G + + C + + + M LIGVSKA+L +VIFC
Sbjct: 98 LTQRKTTATFKQMDGVI-RANDASGERTSYTHKCGELDKTVPM--LIGVSKAVLESVIFC 154
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEI 227
HQE SSWPL EG +K+ FD+IF++ +Y+KAL+ ++ QR ++ E+
Sbjct: 155 HQEESSWPLQEGAVLKKKFDDIFESARYSKALDELRKQRLAKNAQVKEL 203
>gi|449018684|dbj|BAM82086.1| DNA repair protein RAD50 [Cyanidioschyzon merolae strain 10D]
Length = 1322
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 24/216 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L +L G+R+F D+ + +RFQ P+T+I+G NG GKTTI+EC++ A T E P
Sbjct: 1 MSRLIKLGFSGVRSFGPDEEQRLRFQAPITVILGANGTGKTTIVECLRLATTGELPPLVD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR-SL 119
G FVHDPR+ + E A + + +G++ + ++L+ T + V SL
Sbjct: 61 KGAAFVHDPRLRESKETKAKI--RLLFEDALGRQITVNRQLQLRLTTAGKQSFSTVETSL 118
Query: 120 LLSNKNGKD-NCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+ +K+G+ + R I+ A +GV +A+L NVIF
Sbjct: 119 SIRDKDGQHIKTSNRCNDINAMAPA--------------------FLGVRQAVLENVIFV 158
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
HQE S WPL + KKVKE FD+IF+A Y KAL +I+
Sbjct: 159 HQEESLWPLQDPKKVKEKFDDIFEARGYAKALIAIQ 194
>gi|452844632|gb|EME46566.1| hypothetical protein DOTSEDRAFT_70544 [Dothistroma septosporum NZE10]
Length = 1305
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 154/622 (24%), Positives = 268/622 (43%), Gaps = 103/622 (16%)
Query: 699 ENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELK-- 756
E+ C CTR F S G LK +++++ EQ K L + + LQ K
Sbjct: 677 ESHNACKTCTRDFGSKDPRRGR-QLLKAQVEKVLEQNRPKNDANATLEETEDVLQTAKAA 735
Query: 757 -PVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDL 815
P YE+ KL++ P LRS++ +LE + L++ A E K+
Sbjct: 736 GPAYESWDKLKNKTFPDLRSEISKLEVECDQLTSRLEQQDMAAEVKKSANA--------- 786
Query: 816 TLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEK--KNELNTFRSKIESG 873
++N L R ++ +S S + +++ +QKE L +S I+
Sbjct: 787 --------DVNALSRTVQTMVKYVSDTSSFAGQIQELMTKQKEAGLSRGLEAIQSDIKKA 838
Query: 874 QTRLNS----HNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLE---DRKCELEGMDSVYQ 926
+ + ++E S + + I S +L + G L+ E +K L+ + Y+
Sbjct: 839 NDQSKAAKARNSEATSSRDRSRTRISSLELQLSDAKGKLRDAEYEVQQKKSLQTQEDDYK 898
Query: 927 TELEELGRKVAPIETQLNLAQSELDALKKEH---KKKLNEEGAKIQD----YTKQLEEVK 979
+ E + + ++ +L SEL + +H K++ ++ +QD TK + E++
Sbjct: 899 GLIAEQRKNITTLDAELQNLASELSIERAKHDEIKRRRGDQDRILQDKAGKLTKSVSELE 958
Query: 980 RIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEE 1039
+I Y R QL + V+ + + A + R I E+ Q + +
Sbjct: 959 SADRDIQAYHDRAGDEQLRRAQREVENTQEELARMEASQSDAVRRIKELEQRTRDDEGTK 1018
Query: 1040 IDLKNNLTLLEKKEAVAKL-NEELKLSEIMI-SDLTKYHHTL-------ENCVIKYHS-- 1088
+ + NN + +A+ L NE +L + +D +Y + + K S
Sbjct: 1019 VSIINNQRYRKDLKALDNLRNEIAELEDTNAEADKKRYEQQVGSHERRRQEAASKQASVT 1078
Query: 1089 QKMRSINRLIREY---WTRIY------------QLKLSEIMISDLTKYHHTLENCVIKYH 1133
++ SI+ +++ W Y Q++ ++ I DL +Y L+ ++KYH
Sbjct: 1079 GQLTSISDQLQQLEQDWATTYANAGREFRKAHIQVETTKAAIEDLGRYAGALDKAIMKYH 1138
Query: 1134 SQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
S KM +IN +I E W + YQG+D+D I I ++ T + ++YNYRV K +E DMR
Sbjct: 1139 SLKMEAINGIIGELWRKTYQGSDVDTILIRSESET-VKANKSYNYRVCMMKQDVEMDMRG 1197
Query: 1194 RCSAGQRVLACLIIRLFISD---------------------------------------Q 1214
RCSAGQ+VLA +IIRL +++ Q
Sbjct: 1198 RCSAGQKVLASIIIRLALAECFGVNCGMIALDEPTTNLDQENIEALARSLAEIISVRRTQ 1257
Query: 1215 KNFQLIVITHDEEFIENLTAID 1236
NFQLIVITHDE F++ +++ D
Sbjct: 1258 SNFQLIVITHDEAFLKAMSSSD 1279
>gi|440296841|gb|ELP89602.1| DNA double-strand break repair Rad50 atpase, partial [Entamoeba
invadens IP1]
Length = 775
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 122/234 (52%), Gaps = 39/234 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M +L I GIR+ + K + F +PLTLI G NG GKTT+IE ++FA T YP +
Sbjct: 1 MTTFQKLEIAGIRSVDSHKPVEIEFFKPLTLIQGPNGAGKTTLIESLRFACTGVYPPNSQ 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G+ F+ DP + P +T A VKL+ + V + R
Sbjct: 61 TGRLFLRDPN----------------NSPT----RKTEAYVKLKLKTVKGEEVDITRKAS 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+S +NGK T++ +I A G ++ES + + S +L++VIFCHQ
Sbjct: 101 VSLENGKLKLTTKEV----EILADG--------KEESKDFIGQTVETSNEMLSSVIFCHQ 148
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQAT 234
E++SWP +EGKK+KE FDEIF TKY+K +E +KEI ++K+ + T
Sbjct: 149 EDASWPFEEGKKLKERFDEIFGTTKYSKLIEDT-------QKEIKDLKSQQKET 195
>gi|403221740|dbj|BAM39872.1| DNA repair protein Rad50 [Theileria orientalis strain Shintoku]
Length = 991
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 152/562 (27%), Positives = 272/562 (48%), Gaps = 78/562 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKT---------TIIECIKFAL 51
M L+ L I GIR+F D+ ++F++PLTLIVG+NG GKT T++EC+K
Sbjct: 1 MTTLNSLEIKGIRSFTPDRTECLKFEKPLTLIVGKNGSGKTFQRDSTYIQTLVECLKAVT 60
Query: 52 TNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENND 111
P P GK G+NF+ + ++ K E + +K+ + NN+
Sbjct: 61 CGILP------------PSQGK--------GRNFIFNSKLKKCSEVKSSIKMTFSSHNNE 100
Query: 112 TVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESV---LEMCNLIGVS 168
T+ RS +SN T T S + T NL L +S + + +G+S
Sbjct: 101 TIAASRSYCISNDKYDPKKLTFKATDS-TLDITSADGNLRTLSLKSTQMDTTVPSYMGMS 159
Query: 169 KAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIK 228
+A+L+NVIFCHQ+ ++WPL++ K+K FD++ + + KAL+S+ + RKE +
Sbjct: 160 RALLDNVIFCHQDENNWPLEDASKIKARFDDLLETAGFTKALQSLS----KARKE----Q 211
Query: 229 AHYQATLNYKKEADSKKQLIYNNTQKRDQSF--EELHNI---EESMKPINEKLVQ---LT 280
Y +LN K EA K+++I +T ++ + +E+ I +ES+K + L+ L
Sbjct: 212 ETYILSLNSKLEA-HKQEIIRIDTLRKKWNVIKDEIDRIKREQESLKNKSTVLIDEIALV 270
Query: 281 EKE-RNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEK 339
+K+ + S + +Y +T+ ++E CN L + +++ E+ F +L E+
Sbjct: 271 QKDYESASAIYNEYNKCETDYLKLKEECNLLYEHLSEIYDESLEEILK----FHSDLSEE 326
Query: 340 CSELENQERLKSQYIQEE-KQSH------THINEAQMKLGKLERDEETHKKLNDTLKTKL 392
E E + S+ I E KQ + T I + ++ +L D E ++K D L+T+
Sbjct: 327 LRESETKNDELSRTIHELCKQLYDYNKKLTDIGSLENRVTRLREDYEVNEKRIDQLRTE- 385
Query: 393 NNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLS-DIKILERTFSDNE----NTKQ 447
L +D + + E L +S ++++ L+ + + LE F+ + NTK
Sbjct: 386 --LCTAFSIDEVNFGELIESKLELLSTIS--SMEEQLTLEGQNLEDEFNSLQSSLLNTKG 441
Query: 448 AEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNS 507
N LI+ S I S + +E +++ + ++++E+N S+ L KL+ +
Sbjct: 442 TAHNRLIIRVAAFHS-ISSTLKSVESKIREIEALTSKLDELNDSKDD---LNKKLDEATN 497
Query: 508 EIDQLSKSLDPDQLKNEIEAWI 529
E+ +L + L L+NE E +
Sbjct: 498 EVAELEQRL--TNLQNEKEKML 517
>gi|294887375|ref|XP_002772078.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983]
gi|239876016|gb|EER03894.1| DNA repair protein RAD50, putative [Perkinsus marinus ATCC 50983]
Length = 1328
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 35/232 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L++L I GIR+F +++ + F++P+TLIVG NG GKTT+IEC+K A T P
Sbjct: 1 MTTLNKLGIQGIRSFSSERIEAIEFEKPVTLIVGHNGAGKTTVIECLKMATTGVLPPNCD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G FV DP N P E +KL V + R
Sbjct: 61 KGHGFVFDP--------------NVAGVP------EVKGQIKLMFRSAAAKQVVMSRIFQ 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMC--------NLIGVSKAIL 172
L+N+ ++ TT + V+ G Q ++ + C L+GV KA+L
Sbjct: 101 LTNQ--RNRAGVLKTTFKQLESLIKVKGENGAPTQ-TITKKCADMDVLIPQLMGVPKAVL 157
Query: 173 NNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEI 224
NVIFCHQE+S+WPL + +K+ FD+IF + +Y KALESI ++ RKE+
Sbjct: 158 ENVIFCHQEDSNWPLADKAALKKKFDDIFGSARYTKALESI----EKCRKEL 205
>gi|19074483|ref|NP_585989.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|74697545|sp|Q8SRK6.1|RAD50_ENCCU RecName: Full=DNA repair protein RAD50
gi|19069125|emb|CAD25593.1| RAD50-LIKE DNA REPAIR PROTEIN [Encephalitozoon cuniculi GB-M1]
Length = 1247
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 110/217 (50%), Gaps = 25/217 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA + +L I G+R+F ++ + F PLTLIVG NG GKTTIIE +K+A T P
Sbjct: 1 MASIKKLMIRGVRSFSHKESNTLEFYSPLTLIVGANGTGKTTIIESLKYATTGSLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP + E VKL T + +T+ R++
Sbjct: 59 -------------------SRGGAFIHDPSVAGLAEVQGQVKLLFTNVHGETMICSRTIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L+ + + T ++ I + GV G + E M GVS +IL ++IFCHQ
Sbjct: 100 LAQRRDRREQKTLESVIWAERDGEGVSGRSGDVDAE----MPQHFGVSGSILESIIFCHQ 155
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
E S+WPL E VK+ D+IF + KY KAL+S+K R
Sbjct: 156 EESTWPLGEPVVVKKKLDDIFASAKYGKALDSLKSSR 192
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 29/249 (11%)
Query: 1083 VIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
V Y + ++ R + Y ++K E+ DL K L+ ++ +H+ K+ +N
Sbjct: 1025 VKSYKQELLKDHGRTVENYNKCFIEVKALELSCMDLDKCIQALDKAIVDFHTSKLEEVNA 1084
Query: 1143 LIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVL 1202
+++ WT Y+G+D+D+I I T S +RTYNY+VV K G+E DMR R SAGQ+++
Sbjct: 1085 TLKDLWTNTYRGDDVDWIKIK----TESSGQRTYNYKVVFVKGGVELDMRGRSSAGQKMI 1140
Query: 1203 ACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFA 1262
A ++IRL ++D V+ D E T +DR + ++LA T SR
Sbjct: 1141 ASILIRLALADSFASSCSVLALD----EPTTNLDRDNI-------ESLAFTLSRV----- 1184
Query: 1263 LDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIHLRSL 1322
I +FQLIVITHDE+F++ L+ Y R+ R G S I S+
Sbjct: 1185 ---------ISRHRRDADFQLIVITHDEDFVQLLSRGGPEYFYRLSRSESGDSMIVRHSI 1235
Query: 1323 LSSRLLSRN 1331
+R + N
Sbjct: 1236 YGTREMGPN 1244
>gi|344301138|gb|EGW31450.1| hypothetical protein SPAPADRAFT_67510 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1307
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 166/668 (24%), Positives = 300/668 (44%), Gaps = 135/668 (20%)
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQ 749
FN + E +C LC R FE+D S+ + +LK + E K H +Q + +
Sbjct: 672 FNVTAISIAEKNNQCLLCKRSFEAD-SLQKFIAELKLTVDE----KKIKAIH-NQSVEIK 725
Query: 750 RSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+ L ++K + +I+ L++ I + +S EL+E +L++ K L+T ++
Sbjct: 726 KELDDVKAINLDIINLRECQKQIETFKSIKKELQEKESLLLEQLQQAKVELQTQQSSLDV 785
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR 867
L+L+ ++ + + E+N + +++ +++ + + ++ A Q+EK + + R
Sbjct: 786 GLNLRRPISEIVRLNTEVNDTEMQVDELSEELNDFGTVVLSYSELQALQQEKNSLMKEER 845
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
K+ + +LQ L+ + DI + ++ +K+++D E E
Sbjct: 846 LKVNNYTESKYVAQRELQRLENRVKDIRLQISKLETSLSEIKNIKDSITETEA------- 898
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKE-------------HKKKL------------- 961
LE+L + + + LN EL+++K E H +K+
Sbjct: 899 NLEKLEKNIDQSKITLN----ELNSIKAERITTLKQVQEEHHHAEKMIHNDVEKVSRLSS 954
Query: 962 -------------NEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
N + K+++ T ++++V +++ L T L+ ++AL + V + +
Sbjct: 955 SFKVLQEAIFTFENHDSVKLEENTSKMQQVSS-EIDTLKDTIEENLSSVSALEKQVYESS 1013
Query: 1009 QRKEDIIA---------KRGVCERTINEINQSIANQSLEEID-----LKNNLTLLEKKEA 1054
+ + +IIA K E IN I+ A EE L+ +T L + A
Sbjct: 1014 RIEHNIIANIDYRAQLRKLEQAEFEINGIDIENAQNRKEEYQEKSRKLRQEITNLTSQHA 1073
Query: 1055 VAKLNEELKLSEI-MISDLTK-YHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSE 1112
K+ E+ I D K H LE + +++N+ E W + L+ +
Sbjct: 1074 G-------KIGEVKQIKDQIKGLHKELET--------EYKNVNQAYHEEWIK---LQTNM 1115
Query: 1113 IMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK 1172
++ +D+ Y L+N ++KYHS KM INR++ E W++ Y+G+DI I+I +DV ++
Sbjct: 1116 LVSNDIQNYSKALDNAIMKYHSIKMEDINRILGELWSQTYKGSDISTIAIKSDVNLQAKG 1175
Query: 1173 RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------- 1213
R+YNYRVV KN E DMR RCSAGQ+VLA ++IRL +++
Sbjct: 1176 NRSYNYRVVMVKNASELDMRGRCSAGQKVLASILIRLALAECFGANCGMIALDEPTTNLD 1235
Query: 1214 --------------------QKNFQLIVITHDEEFIENLTAIDRA--YVVRIVRDHKALA 1251
Q NFQLIVITHDE+F+ ++ DR + RI RD +
Sbjct: 1236 SENSESLAEALNHIIEYRKAQSNFQLIVITHDEKFLTHIRG-DRFTDHFYRIQRDEGNKS 1294
Query: 1252 ETFSRNCG 1259
+S G
Sbjct: 1295 RIYSLPIG 1302
>gi|308198054|ref|XP_001386802.2| DNA repair protein [Scheffersomyces stipitis CBS 6054]
gi|149388833|gb|EAZ62779.2| DNA repair protein [Scheffersomyces stipitis CBS 6054]
Length = 1306
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 174/665 (26%), Positives = 299/665 (44%), Gaps = 139/665 (20%)
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKL-----KTKIKEIPEQTNNKKTHIDQ 744
FN + E E C LC R F+S + +++L K KIKE +Q K
Sbjct: 671 FNITAISIAEKEQHCLLCKRTFDS-RGLQKFIDELQHSVKKEKIKETEDQAQEIK----- 724
Query: 745 LCKQQRSLQELKPVYENIMKLQDTDIPSLR--SKLIELEENVIETKGELKKLKTALETPK 802
+ L+ +K + ++ +D+ S+ +L +L E K +L + LE +
Sbjct: 725 -----KELESVKSINSQVLSYRDSIKSSVEIIKRLDDLNATYEEQKFDLDAHEELLEESR 779
Query: 803 TKEKTALSLQ---GDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEK 859
K+ L L+ G++ L+ I EL Q +++ +I G+ S + + ++ Q+ K
Sbjct: 780 NKKDEVLMLRKSLGEIVRLNGEILEL---QNQVKEVSEEIDGLGSVVLSISELQKLQQSK 836
Query: 860 KNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELE 919
++ + R ++ + ++Q L+ N + +L + + + KSL D
Sbjct: 837 SLQIKSIRLEVTDDTEAKHDIQREIQRLE---NKVKDTRLAI---SNLEKSLAD------ 884
Query: 920 GMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVK 979
++++ + + EL K+ + T L+ + L L E++ KL+ E A ++ + + + K
Sbjct: 885 -INNI-KNSISELEEKILSLGTTLSNTKERLTELY-ENRDKLSSEFANTKETNRNVLDSK 941
Query: 980 RIKLEILNYTKRGTLTQLAA------------LRES------VQKLNQRKEDIIAKRGVC 1021
+ L N R +TQL+A LRE+ V+K+ + ED + + V
Sbjct: 942 QKALNDSNEIVR-VITQLSAAIKDYETHDINKLRENLSEQERVRKVMEALEDKM--KAVR 998
Query: 1022 ERTINEINQS----------IAN-------QSLEEIDLKNNLTLLEKKEAVAKLNEELKL 1064
+ N +Q IAN + LEEID N + L+ + A A+ E +
Sbjct: 999 DEIKNLESQMMNFKDSKHHYIANLDYRAQLRKLEEID--NEIEALDIENAQARKEEYQER 1056
Query: 1065 SEIM---ISDLTKYHHTLENCVIKYHSQ----------KMRSINRLIREYWTRIYQLKLS 1111
S + I++LT H V + Q +++N + R W + L+ +
Sbjct: 1057 SRSLRQEITNLTSEHAGKIGEVKQIKDQVKGLQKELETDFKNVNEIYRAEWIK---LQTN 1113
Query: 1112 EIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSE 1171
+ +D+ Y L+N ++KYHS KM INR++ E W++ Y+G+DI I+I +DV S+
Sbjct: 1114 MFISNDIQTYSKALDNAIMKYHSIKMEDINRILGELWSQTYKGSDISTIAIKSDVNLQSK 1173
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------ 1213
R+YNYRVV KN E DMR RCSAGQ+VLA ++IRL +++
Sbjct: 1174 GNRSYNYRVVMYKNSNELDMRGRCSAGQKVLASILIRLALAECFGVNCGIIALDEPTTNL 1233
Query: 1214 ---------------------QKNFQLIVITHDEEFIENLTA---IDRAYVVRIVRDHKA 1249
Q+NFQLIVITHDE F+ ++ D Y R+ RD +
Sbjct: 1234 DHENSEALAEALNNIIEYRKAQRNFQLIVITHDENFLTHINGGKFTDHFY--RVQRDEQQ 1291
Query: 1250 LAETF 1254
+ F
Sbjct: 1292 NSRIF 1296
>gi|347838982|emb|CCD53554.1| similar to DNA repair protein rad50 [Botryotinia fuckeliana]
Length = 1316
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 188/395 (47%), Gaps = 32/395 (8%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ ++++ I G+R+F + F PLTLIVG NG GKTTIIEC+K+A T P
Sbjct: 1 MSKIEKMRICGVRSFDHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTGAQP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
++ G F+HDP++ + E A VKL + + R +
Sbjct: 57 ----------------PNSKVGGAFIHDPKLCGEKEVLAQVKLSFQSTTGSRMVITRCMQ 100
Query: 121 LSNKNGKDNCATRDT--TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
L+ T D ++ T V +G + + M +GVS+A+L+NVIFC
Sbjct: 101 LTVTKTARKMKTLDAGLMVNNGGERTAVSHKVGEIDKI----MQTALGVSEAVLDNVIFC 156
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQ++S WP+ E ++K+ FD+IF+ATKY KA++S+K + ++I + A + K
Sbjct: 157 HQDDSLWPMSEPSQLKKKFDDIFEATKYTKAVDSLKSLKKDYAQQIKGMIADESIAKDNK 216
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
+ + K + + DQ EE + +M+ + E + + + + +T K
Sbjct: 217 DKGEKTKSRCEELSAQIDQLSEEALKDKANMEAVREVVDAKQAQAAEFWELVQKLRTNKE 276
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ-ERLKSQYIQEE 357
+E+ L+ IK L D+ L+S L+ + ++ E+E Q E L+ QY ++
Sbjct: 277 RVKFSEENLESLQKRIKPLSESDEW-LKSTLDQYA----DRILEMEQQDEELQKQYRDQQ 331
Query: 358 KQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
++ + E K L R + + + L++++
Sbjct: 332 QKVSANTTELGKKQADLGRQQALKQAYEEELESRI 366
>gi|326427583|gb|EGD73153.1| hypothetical protein PTSG_04865 [Salpingoeca sp. ATCC 50818]
Length = 1087
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 29/222 (13%)
Query: 1100 EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
E+ + + + ++ + DL KY+ L+N ++K+H+ KM SINR+I+E W + YQGNDIDY
Sbjct: 886 EFQRKSIECQATKQLQEDLNKYYSALDNAIVKFHALKMESINRIIKEIWQKTYQGNDIDY 945
Query: 1160 ISIAADVGTGSEKRR--TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
+ I +DV E R +Y YRVV K DMR RCSAGQ+V+A +IIRL ++D
Sbjct: 946 VEIVSDVEKKKETTRGKSYQYRVVMVKGDTRLDMRGRCSAGQKVMASIIIRLALADCFCA 1005
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
V+T D E T +D + +ALA+ + + +P
Sbjct: 1006 NCGVLTLD----EPTTNLD-------YENKEALAKCLADIVNDRKVKQP----------- 1043
Query: 1278 QKNFQLIVITHDEEFIENLT--AIDRAYVVRIVRDHKGLSDI 1317
NFQL++ITHDE+F+E L ++ R Y R+ +D +G S I
Sbjct: 1044 --NFQLLLITHDEKFLELLHRFSLGRIY-YRVSKDERGHSVI 1082
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 34/45 (75%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIE 45
M+ +++L I G+R++ + ++V+ F P+T+I+G NGCGKTT ++
Sbjct: 1 MSTVEKLLIKGVRSYDPESHQVIEFLHPMTVIIGANGCGKTTKLD 45
>gi|346972249|gb|EGY15701.1| DNA repair protein rad50 [Verticillium dahliae VdLs.17]
Length = 1292
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 169/667 (25%), Positives = 302/667 (45%), Gaps = 94/667 (14%)
Query: 703 RCPLCTRFFESDYSV------PGLVNKLKTKIKE-IPEQTNNKKTHIDQLCKQQRSLQEL 755
+C LC R F+ SV L+ L KE E K +D+L R ++
Sbjct: 669 KCKLCDRGFDDKQSVNKSRFSDKLIKYLDPSKKEKASEDLEKSKATLDKL----RQVRVQ 724
Query: 756 KPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDL 815
YE + ++P L+ LE + + +L++ + + K+ +L +
Sbjct: 725 HETYERSL----GELPGLKEACKTLEAELETHERQLEEHDENVNAEEAKQADVEALNKTV 780
Query: 816 TLLDQNIRELNTLQRELER-QESKISGMRSTGVD-LDQVLAQQKEKKNELNTFRSKIESG 873
+ Q ++++ + ++ER + SGM + D + ++ A KE+ +KI +
Sbjct: 781 MNISQTLKDMKDSEAQVERIMSQQSSGMATRTADAIHELQATCKEQMRSTKARLTKITTD 840
Query: 874 QTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM--DSVYQTEL-E 930
+ R+ ++L SL+ +++++ +K VQ L+ +D + +++ + D Q EL +
Sbjct: 841 RQRMR---DQLNSLELERSELKNKLSKVQS---QLERKKDFQNQIQALKEDQANQRELIQ 894
Query: 931 ELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQD---YTKQLEEVKRIKLEILN 987
+ + + IE + A++ D + + K E A +++ + E+K ++ +I +
Sbjct: 895 KADQDLEVIEPSIAEARAVRDDTLQRGRAK---EKAIVEERDLVANSVTELKMVESDIQD 951
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIA--KRGVCERTI--NEINQSIANQSLEEIDLK 1043
Y RG + LAA + ++ L E IA ++ + + T+ N++ Q I N ++ ++
Sbjct: 952 YMDRGGPSNLAANQRAIDGL----EKTIAATEQEISDLTVRTNKLKQDIDNGDRKKQNIS 1007
Query: 1044 NNLTLLEKKEAVAKLNEELKLSEIMISD------------LTKYHHTL---ENCVIKYHS 1088
NNL + K + L E+ + +D L H+ L ++
Sbjct: 1008 NNLKFRQNKRQLDVLRAEIDDLQSCDADDDYDRLNDEAVQLENRHNMLVAERGSLMGQMK 1067
Query: 1089 QKMRSINRLI------------REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
K + RL+ ++Y +++ ++ I DL +Y L+ +++YH K
Sbjct: 1068 TKDEELARLLGRVGKWDYRDASKKYRESHIKVETTKAAIEDLGRYGAALDKAIMQYHGLK 1127
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCS 1196
M +NR+ E W YQG DID I I +D G+ RR+YNYRV K E DMR RCS
Sbjct: 1128 MEEVNRIAGELWQSTYQGTDIDTILIRSD-NEGATGRRSYNYRVCMVKQDTEMDMRGRCS 1186
Query: 1197 AGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
AGQ+VLA +IIRL +++ +I DE T +D+ + K+LAE+
Sbjct: 1187 AGQKVLASIIIRLALAESFGVNCGLIALDEP----TTNLDKDNI-------KSLAESLHH 1235
Query: 1257 NCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLS 1315
IK+ Q NFQLIVITHDEEF+ ++ + R+ RD K S
Sbjct: 1236 I--------------IKSRQAQSNFQLIVITHDEEFLRHMRCSEFCDSFFRVKRDDKQCS 1281
Query: 1316 DIHLRSL 1322
I S+
Sbjct: 1282 VISRESI 1288
>gi|84995674|ref|XP_952559.1| DNA repair protein rad50 [Theileria annulata strain Ankara]
gi|65302720|emb|CAI74827.1| DNA repair protein rad50, putative [Theileria annulata]
Length = 1139
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 150/303 (49%), Gaps = 60/303 (19%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M ++ + I GIR+F + ++F++PLTLIVG+NG GKTT++E +K + P G S
Sbjct: 1 MTTINSIEIRGIRSFTPYRTEFLQFEKPLTLIVGKNGSGKTTLVESLKAVTSGTLPPGQS 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ FV + ++ K E AS +K+ N+TV RS
Sbjct: 61 KGRTFVFNNKLNKSSEVKAS--------------------IKITFNTHTNETVSASRSY- 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQES-----VLEMCN-------LIGVS 168
T D T +K+ G + L Q+ L+ + L+G+S
Sbjct: 100 ---------TVTTDKTDPKKLTFKGTENVLNVTSQDGKKKSLALKTTDMDIAVPLLMGMS 150
Query: 169 KAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI--------------K 214
KA+L+NVIFCHQ+ ++WPL++ K+K FD++ + ++Y KAL+SI K
Sbjct: 151 KALLDNVIFCHQDENNWPLEDPSKIKSRFDDLLETSRYTKALQSIQRAKREQEDMIILKK 210
Query: 215 IQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINE 274
+ D + +I ++K LN + AD +KQL + Q+ ++ +E+ ++ M +NE
Sbjct: 211 SKLDAYKSQILQVKF---LNLNLSQIADLRKQL-ETSRQEISKTKKEIELTQKQMNEMNE 266
Query: 275 KLV 277
K++
Sbjct: 267 KML 269
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 101/245 (41%), Gaps = 77/245 (31%)
Query: 1093 SINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIY 1152
S +R +Y +LK + DL KY+ LE+ + YH +K+ +IN ++ W +Y
Sbjct: 911 SFSRAQSQYMETYIELKSHIVAKMDLEKYYKYLESSLHNYHLEKINNINSSLKRIWREVY 970
Query: 1153 QGNDIDYIS-------------------------IAADVGTGSEKRRTYNYRVVQ-KKNG 1186
G IDYI + DV +Y+YRVV NG
Sbjct: 971 TGTHIDYIQSEEINMDFLDILVNTRFICCLVQSKVDKDVSPTEISSHSYSYRVVMVTPNG 1030
Query: 1187 IEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRD 1246
+E DM+ CSAG+R+L+ L++R+
Sbjct: 1031 VELDMKGHCSAGERILSSLVVRM------------------------------------- 1053
Query: 1247 HKALAETFSRNCGIFALDEPTTNLDIKNASDQK------------NFQLIVITHDEEFIE 1294
AL E FS NC I ALDEPTTNLD N + NFQL++ITHDE F
Sbjct: 1054 --ALIECFSTNCTILALDEPTTNLDKDNTQSLENSLSKLVNESNLNFQLMIITHDEGFAN 1111
Query: 1295 NLTAI 1299
+ +
Sbjct: 1112 KMATL 1116
>gi|440637483|gb|ELR07402.1| hypothetical protein GMDG_02537 [Geomyces destructans 20631-21]
Length = 1319
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 164/659 (24%), Positives = 283/659 (42%), Gaps = 93/659 (14%)
Query: 699 ENEPRCPLCTRFFESDYSVPG----LVNKLKTKI-KEIPEQTNNKKTHIDQLCKQQRSLQ 753
E E +C LC R F+ PG ++KL++K+ K+ E + ++ +C Q
Sbjct: 695 ERENQCHLCDRKFQ-----PGEKSATISKLRSKLAKDARETLTVELKEMEDMCG---DAQ 746
Query: 754 ELKPVYENIMKLQDTDIPSL----------RSKLIELEENVIETKGELKKLKTALETPKT 803
++ YE ++L ++P+L RS LI+ E + E + K +E+
Sbjct: 747 AVRSQYETHVRLSTAELPALEKDIKKLDDQRSTLIKRLEGQDNSVREEESAKLDIESLAK 806
Query: 804 KEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNEL 863
T + D+T ++ I + + Q K+SG + + ++ + +QQ+ +
Sbjct: 807 SVSTIVRYVTDITGFEEQIASIASQQ--------KLSG---SHLSVNDIQSQQEICNKKS 855
Query: 864 NTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDS 923
+ +S+I + ++ L+ D SK + + L R E++ +++
Sbjct: 856 DELKSQIAKLVKEKDESRSRINLLELDLRDAGSKMVEANHQMQRKEELLQRIQEMKEVNA 915
Query: 924 VYQTELEELGRKVAPIETQLNLAQSELDALKKEHK---KKLNEEGAKIQDYTKQLEEVKR 980
Q + + +E ++ A+++L ++ E K K + +E KI + +L +
Sbjct: 916 GQQEAINRADSSLKSLEPEIKNAEAKLTNIRNEGKTKEKAVGDESFKISETVNKLRLADK 975
Query: 981 IKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEI 1040
I +Y +L A +S+ L + I A+ N I + I N +
Sbjct: 976 A---IRDYIDDDGPGKLKACEQSIIDLEREISRIDAEISDVTEKANAIKEQIDNSERIKR 1032
Query: 1041 DLKNNLTLLEKKEAVAKLNEE-------------LKLSEIMISDLTKYHHTLEN-----C 1082
++ +N+ + K A+ LN E L+LS ++ L N
Sbjct: 1033 NISDNIKYRKFKRALDVLNAEIVELELRNANEDLLRLSREAEKQNMRHQKLLANRGPILG 1092
Query: 1083 VIKYHSQKMRSI--------NRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHS 1134
++ ++R I + Y ++++++ I DL +Y L+ ++KYHS
Sbjct: 1093 AMRAKDDELRGILLDWETEYKDAAKNYRESHIKVEITKAAIEDLARYGTALDQAIMKYHS 1152
Query: 1135 QKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
KM INR+ E W YQG D+D I I +D + R YNYRV K E DMR R
Sbjct: 1153 LKMEEINRIAGELWQSTYQGTDVDTILIRSDAENAA-GRSNYNYRVCMVKQDAEMDMRGR 1211
Query: 1195 CSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETF 1254
CSAGQRVLA +IIRL +++ +I DE T +DR + ++LAE+
Sbjct: 1212 CSAGQRVLASIIIRLALAECFGVNCGLIALDEP----TTNLDRDNI-------RSLAESL 1260
Query: 1255 SRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1312
GI + +N FQLIVITHDEEF+ + D + RI RD K
Sbjct: 1261 H---GIIRTRQAQSN-----------FQLIVITHDEEFLRYMKCADFCDHYYRISRDDK 1305
>gi|298204349|gb|ADI61823.1| endonuclease-reverse transcriptase [Bombyx mori]
Length = 997
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Query: 1319 LRSLLSSRLLSRNSKLTLYNTIIKPVLLYGSETWSVTKREEHQMQVFENKVYRTIFGPYF 1378
L S++LSRN K+ LY T+++P+L+YGSETW ++K++E+++ VFE K+ R IFG
Sbjct: 832 LLKYFCSKILSRNIKILLYKTLLRPILIYGSETWVLSKKDENRLLVFERKILRRIFGAV- 890
Query: 1379 DHQTQSWKRRHNSDIHALSKQPNIVATMNTNRLRWLGHLMRIDKNRAVWKIFTNTPHQGK 1438
+ Q W+ R+N +++ + K PNI+ T+ RLRW GH++R++ R ++ P +G+
Sbjct: 891 -RENQIWRTRYNHELYDVYKDPNIITTIKIGRLRWAGHVVRMESTRMPRQLLYGKP-EGR 948
Query: 1439 RLPGRPRSCWINEMKRLCNRWGLNDWEELTQHRVLWR 1475
R GRP+ W++ ++R G+ +W+E +R +WR
Sbjct: 949 RSRGRPKLRWLDGVERDLKNIGVKNWKEKALNRAVWR 985
>gi|384499176|gb|EIE89667.1| hypothetical protein RO3G_14378 [Rhizopus delemar RA 99-880]
Length = 1115
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 40/175 (22%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y +K E+ I DL KY L+ ++KYH+ KM+ +N++IRE W YQG DIDYI
Sbjct: 930 YGELFIDVKSKELAIGDLEKYSKILQMAIMKYHTLKMQDLNKMIRELWVNTYQGGDIDYI 989
Query: 1161 SIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------- 1213
+ AD G+ R++NYRVV +NG E +MR RCSAGQ+VLA +IIRL +++
Sbjct: 990 EVRAD-DEGTTANRSFNYRVVMIQNGSELNMRGRCSAGQKVLASIIIRLALAETFCVNCG 1048
Query: 1214 --------------------------------QKNFQLIVITHDEEFIENLTAID 1236
Q NFQ +VITHDEEF+E L+ D
Sbjct: 1049 VFTLDEPTTNLDRENIESLAQSIVRIIQRKRGQSNFQFVVITHDEEFVEYLSRYD 1103
>gi|156089429|ref|XP_001612121.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799375|gb|EDO08553.1| conserved hypothetical protein [Babesia bovis]
Length = 1121
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 167/322 (51%), Gaps = 26/322 (8%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ L L I GIR F + + + F++PLTLIVG NG GKTTI+EC+K L P A
Sbjct: 1 MSTLKSLQIQGIRCFSPNNAQSIEFEKPLTLIVGPNGAGKTTIMECLKMGLCGILPPNAD 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
GK+F++D ++ ++ E A +I ET+ K+Q N +V R
Sbjct: 61 RGKSFIYDSKMSEQREVRA----------QITLGVETYQ--KVQIFATRNYSVTRER--- 105
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
N K T ++ + R I V+ NLG + + +++G+S+A++++V+ CHQ
Sbjct: 106 --NDGSKPTFKTGESKM-RVIGPDEVESNLGMKMSDIDTSLPSMMGLSRALIDSVVVCHQ 162
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----KIQRDRLRKEIPEIKAHYQATLN 236
+ S+W LD+ K K FD++ + ++Y KAL ++ K Q + +++E+ IK Y A
Sbjct: 163 DESNWALDDLSKFKSKFDDLLETSRYTKALTALQKEKKEQNEAIKREM--IKLEY-AKAQ 219
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+ A+ K Q +N +QS E L +E +K INE L ++ + + + T+ +
Sbjct: 220 ITQVAELKNQF-KSNADNIEQSKERLALLESELKQINETAQMLRKEYEHAAAVCTEIRHT 278
Query: 297 KTERDMIQESCNELESSIKQLF 318
K + + + ++ +I +++
Sbjct: 279 KEAIERLSNDIHIMQQNIGEIY 300
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 102/211 (48%), Gaps = 56/211 (26%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
++Y + +K + DL Y TLE + +YHS+K+ IN +++ W +Y G ++D
Sbjct: 914 QDYAEIMLAVKSHSMAFEDLNLYTKTLEIKLHQYHSEKIEQINTVLKRVWREVYTGTNVD 973
Query: 1159 YISIAAD----VGTGSEKRRTYNYRVVQ-KKNGIEQDMRNRCSAGQRVLACLIIRLFISD 1213
YI I ++ V T R+YNYR+V NG+E DMR RCSAG+RVLA LI+R+
Sbjct: 974 YIEIQSNIDTVVATTGLAPRSYNYRMVMVNHNGVEMDMRGRCSAGERVLASLILRI---- 1029
Query: 1214 QKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIK 1273
L E F NC I ALDEPTTNLD +
Sbjct: 1030 -----------------------------------TLTEAFCYNCNILALDEPTTNLDKE 1054
Query: 1274 NASDQK------------NFQLIVITHDEEF 1292
N + + +FQLI+ITHDE F
Sbjct: 1055 NIASLETSLAKLVNDCSIDFQLILITHDEGF 1085
>gi|320031598|gb|EFW13558.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 322
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 48/262 (18%)
Query: 4 LDQLHIMG-------------IRNFPADKNRVVRFQRPLTLIVGENGCGKT--------T 42
+D+L I+G +R+F ++ ++F PLTLIVG NG GKT T
Sbjct: 40 IDKLSILGFVHGLVTIQAQYRVRSFDNTRSETIQFHTPLTLIVGYNGSGKTVCGVNRDNT 99
Query: 43 IIECIKFALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVK 102
IIEC+K+A T E P S G F+HDP++ + E A VK
Sbjct: 100 IIECLKYATTGELPPN---------------------SKGGAFIHDPKLCHEKEVLAQVK 138
Query: 103 LQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFAT--GVQKNLGCLQQESVLE 160
L + + V RSL L+ K + T+ ++ T G + ++ E
Sbjct: 139 LAFKSTSGARMVVTRSLQLTVKK----TTRQQKTLEGQLLMTKEGERTSISSRVAELDQI 194
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M +GVS+AIL+NVIFCHQ+ S WPL E +K+ FDEIF+A KY KA+++IK R +
Sbjct: 195 MPQYLGVSRAILDNVIFCHQDESLWPLSEPSVLKKKFDEIFEAQKYTKAIDNIKALRKKQ 254
Query: 221 RKEIPEIKAHYQATLNYKKEAD 242
+E+ + K Q K +AD
Sbjct: 255 NEELAKYKIMEQYAKEDKDKAD 276
>gi|71030162|ref|XP_764723.1| RAD50 DNA repair protein [Theileria parva strain Muguga]
gi|68351679|gb|EAN32440.1| RAD50 DNA repair protein, putative [Theileria parva]
Length = 1002
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M ++ L I GIR+F + + F++PLTLIVG+NG GKTT++E +K + P G S
Sbjct: 1 MTTINSLEIRGIRSFTPYRTEFLEFEKPLTLIVGKNGSGKTTLVESLKAVTSGILPPGQS 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ F+ + ++ K E AS +K+ N+TV RS
Sbjct: 61 KGRTFLFNNKLNKSSEVKAS--------------------IKITFNTHTNETVSASRSYS 100
Query: 121 LSNKNGKDNCATRDTT--ISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ T T + I G +K+L + + + L+G+SKA+L+NVIFC
Sbjct: 101 VTTDKVDPKKLTFKGTENVLNVIAQDGKKKSLALKTTDMDMAVPLLMGMSKALLDNVIFC 160
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
HQ+ ++WPLD+ K+K FD++ + ++Y KAL+SI+
Sbjct: 161 HQDENNWPLDDPSKIKSRFDDLLETSRYTKALQSIQ 196
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 94/213 (44%), Gaps = 57/213 (26%)
Query: 1100 EYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
+Y +LK + +DL KY+ LE+ + YH K+ IN ++ W +Y G IDY
Sbjct: 811 QYMETYIELKSHIVAKTDLDKYYKYLESSLHNYHLDKINHINSSLKRIWREVYTGTHIDY 870
Query: 1160 ISIAADVGTGSEKRRTYNYRVVQ-KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
I I TG T + RVV +G+E DM+ CSAG+R+L+ L++R+
Sbjct: 871 IQI-----TGLSTLPTISIRVVMVTPSGVELDMKGHCSAGERILSSLVVRM--------- 916
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNA--- 1275
AL E FS +C I ALDEPTTNLD N
Sbjct: 917 ------------------------------ALIECFSAHCTILALDEPTTNLDRDNIQSL 946
Query: 1276 ---------SDQKNFQLIVITHDEEFIENLTAI 1299
NFQL++ITHDE F + +
Sbjct: 947 ENSLSRLVNESSMNFQLMIITHDEAFANKMATL 979
>gi|448521108|ref|XP_003868427.1| Rad50 DNA double-strand break repair factor [Candida orthopsilosis Co
90-125]
gi|380352767|emb|CCG25523.1| Rad50 DNA double-strand break repair factor [Candida orthopsilosis]
Length = 1302
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 43/202 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
++++ + E W + L+ + ++ +D+ Y L+N ++KYHS KM INR++ E W++
Sbjct: 1098 KNVDEMYHEEWIK---LQTNLLVSNDIQNYSKALDNAIMKYHSIKMEDINRILTELWSQT 1154
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
YQG DI I+I +DV ++ R+YNYRVV K+ E DMR RCSAGQ+VLA ++IRL +
Sbjct: 1155 YQGTDISTIAIKSDVNLQTKGNRSYNYRVVMVKDSSELDMRGRCSAGQKVLASILIRLAL 1214
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
++ Q NFQLIVITHDE+F+ +L
Sbjct: 1215 AECFGSNCGIIALDEPTTNLDSENAEALATALNRVIDYRKRQSNFQLIVITHDEKFLSHL 1274
Query: 1233 TAIDRAYVVRIVRDHKALAETF 1254
Y RI RD K+ + +
Sbjct: 1275 RGFTDHY-YRIDRDEKSKSRIY 1295
>gi|300121231|emb|CBK21612.2| unnamed protein product [Blastocystis hominis]
Length = 206
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 122/222 (54%), Gaps = 31/222 (13%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA + ++ I GIR+F + + ++F +PLT+IVG+NGCGKTTIIEC+K T + P +
Sbjct: 1 MAEISKMTIQGIRSFSPREEKTIKFLKPLTIIVGDNGCGKTTIIECLKAGCTGDLPPECN 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ FV DP + GK E +KL+ +C + V VRS
Sbjct: 61 RGQLFVTDP--------TFYPGK------------EVKGQIKLELSCLDESKVHCVRSYT 100
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVL-----EMCNLIGVSKAILNNV 175
+ K + D T+ KI V KN + ++ L+G+S+AI+NNV
Sbjct: 101 VRATGTKLVFHSLDQTV--KI----VDKNGNTAADSKRVSDISQQIPRLLGMSRAIINNV 154
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
IFCHQE S+WPL + ++K+ FD IF++T Y K+LE++K +R
Sbjct: 155 IFCHQEESNWPLSDRLELKKRFDSIFESTYYTKSLEALKKER 196
>gi|154320740|ref|XP_001559686.1| hypothetical protein BC1G_01842 [Botryotinia fuckeliana B05.10]
Length = 1310
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 32/389 (8%)
Query: 7 LHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFV 66
+ I G+R+F + F PLTLIVG NG GKTTIIEC+K+A T P
Sbjct: 1 MRICGVRSFDHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTGAQP---------- 50
Query: 67 HDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNG 126
++ G F+HDP++ + E A VKL + + R + L+
Sbjct: 51 ----------PNSKVGGAFIHDPKLCGEKEVLAQVKLSFQSTTGSRMVITRCMQLTVTKT 100
Query: 127 KDNCATRDT--TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSS 184
T D ++ T V +G + + M +GVS+A+L+NVIFCHQ++S
Sbjct: 101 ARKMKTLDAGLMVNNGGERTAVSHKVGEIDKI----MQTALGVSEAVLDNVIFCHQDDSL 156
Query: 185 WPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSK 244
WP+ E ++K+ FD+IF+ATKY KA++S+K + ++I + A + K + +
Sbjct: 157 WPMSEPSQLKKKFDDIFEATKYTKAVDSLKSLKKDYAQQIKGMIADESIAKDNKDKGEKT 216
Query: 245 KQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQ 304
K + + DQ EE + +M+ + E + + + + +T K +
Sbjct: 217 KSRCEELSAQIDQLSEEALKDKANMEAVREVVDAKQAQAAEFWELVQKLRTNKERVKFSE 276
Query: 305 ESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ-ERLKSQYIQEEKQSHTH 363
E+ L+ IK L D+ L+S L+ + ++ E+E Q E L+ QY ++++ +
Sbjct: 277 ENLESLQKRIKPLSESDEW-LKSTLDQYA----DRILEMEQQDEELQKQYRDQQQKVSAN 331
Query: 364 INEAQMKLGKLERDEETHKKLNDTLKTKL 392
E K L R + + + L++++
Sbjct: 332 TTELGKKQADLGRQQALKQAYEEELESRI 360
>gi|159470203|ref|XP_001693249.1| DNA repair protein [Chlamydomonas reinhardtii]
gi|158277507|gb|EDP03275.1| DNA repair protein [Chlamydomonas reinhardtii]
Length = 1410
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 89/163 (54%), Gaps = 43/163 (26%)
Query: 1109 KLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-G 1167
K +E+ ++DL KY+ LE ++ +H+ KM IN++I+E W + Y+G DIDYI I AD G
Sbjct: 1236 KTTELAMADLDKYYKALEKALLVFHTSKMADINKIIKEMWQKTYRGQDIDYIQIKADTEG 1295
Query: 1168 TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI---------------- 1211
G+ R+YNYRVV E +MR RCSAGQ+VLACLIIRL +
Sbjct: 1296 AGA---RSYNYRVVMYSGAAELEMRGRCSAGQKVLACLIIRLALAETFCLNCGILALDEP 1352
Query: 1212 -----------------------SDQKNFQLIVITHDEEFIEN 1231
S Q+NFQLIVITHDE F ++
Sbjct: 1353 TTNLDAANSASLAEALAALMKSRSGQENFQLIVITHDEHFAQD 1395
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M ++++ I GIR+F ++ F +PLT+IVG NG GKTTIIE ++ A T E P
Sbjct: 1 MCTVEKILIKGIRSFSPTNEYIIEFYKPLTIIVGSNGAGKTTIIEALRNATTGELPPNTR 60
Query: 61 SGKNFVHDPRIGKKDEASA 79
G+ FVHDP++ + E A
Sbjct: 61 QGQGFVHDPKVAGESEVKA 79
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 27/199 (13%)
Query: 104 QCTCENNDTVCVVR---------SLLLSNK--NGKDNCATRDTTISRKIFATGVQKNLGC 152
Q E + C VR ++L+++ +G A + G++ N G
Sbjct: 209 QVGVEATEVACGVREGAVRGELGGVVLADQGHDGVGGEAEPGVGARERSVPHGIELNGGS 268
Query: 153 LQQES--VLEMCN--LIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNK 208
Q V E+ N +G +AIL NVIF HQE S+WPL EGK + E ++ T+ ++
Sbjct: 269 AQDGGGQVAELRNGAALGAGQAILENVIFVHQEESNWPLAEGKAL-EALRKLR--TEKSQ 325
Query: 209 ALESIKIQRDRLRKEIPEIKAHYQATLNYKKE--ADSKKQLIYNNTQKRD-----QSFE- 260
+L+ ++++ + L K++ ++ AH+ + K AD ++Q+ Q ++ +FE
Sbjct: 326 SLKELRLELETL-KQLKDMAAHHTGERDAAKARVADCQEQIKRLEAQVKELETSRAAFES 384
Query: 261 ELHNIEESMKPINEKLVQL 279
+L IE + + I K QL
Sbjct: 385 KLAAIEAAGRDITAKAGQL 403
>gi|167516574|ref|XP_001742628.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779252|gb|EDQ92866.1| predicted protein [Monosiga brevicollis MX1]
Length = 294
Score = 130 bits (326), Expect = 8e-27, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 109/206 (52%), Gaps = 26/206 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA +++L I GIR+F D++ V+ F P+T++VGENG GKTTI+E ++F T EYP
Sbjct: 1 MAKVNKLLIQGIRSFSPDQHEVLEF-FPITVVVGENGSGKTTIVEALRFITTGEYP---- 55
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
SGK FVHDPRI + A +KL T + + R L
Sbjct: 56 --------------------SGKCFVHDPRIADRPSVDARIKLSFTTTDGQQMVCTRQLT 95
Query: 121 LSNKNGKDNCATRDTTISRKIF-ATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
K TR + K TG + ++ +M +GVSKAIL+NVIFCH
Sbjct: 96 AQQKANASVPTTRSIEGTVKYSDETGQLITVASCASCAMWQMITKLGVSKAILSNVIFCH 155
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATK 205
Q++S+WP EGKK+KE FD IF A +
Sbjct: 156 QDDSNWPFLEGKKLKEKFDAIFSAVR 181
>gi|340500394|gb|EGR27278.1| rad50, putative [Ichthyophthirius multifiliis]
Length = 285
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 116/231 (50%), Gaps = 62/231 (26%)
Query: 1086 YHSQKMRSINRLI--REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1143
Y+ + ++ I+ I ++Y ++ +L + + +D+ Y LE +I YH +KM IN+
Sbjct: 55 YYMKLIQEIDEKIIQQDYSQKLIELDIKNGLCNDIDVYIDELEKTLINYHKEKMLQINKT 114
Query: 1144 IREYWTRIYQGNDIDYISIAA-DVGTGSEKRRTYNYRVVQKKNGIEQ------DMRNRCS 1196
I W +IYQGNDI I I A +VG R+++NYR+V G Q DM+ RCS
Sbjct: 115 IISTWRKIYQGNDISKIEIKAEEVGENQAGRKSFNYRIVMYIIGKNQDDLKEIDMKGRCS 174
Query: 1197 AGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
+GQ+VLAC+IIRL ALAE F+
Sbjct: 175 SGQKVLACIIIRL---------------------------------------ALAEAFTI 195
Query: 1257 NCGIFALDEPTTNLD--------------IKNASDQKNFQLIVITHDEEFI 1293
NCGI ALDEPTTNLD I++ Q++FQLI+I+HD FI
Sbjct: 196 NCGILALDEPTTNLDQEHTIKLAQSLSDLIESRKGQESFQLIIISHDNNFI 246
>gi|429963093|gb|ELA42637.1| hypothetical protein VICG_00389 [Vittaforma corneae ATCC 50505]
Length = 1257
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 124/228 (54%), Gaps = 32/228 (14%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
R Y T ++K E+ + D+ K + L+ ++ +HS K+ +N+ +R+ W+ Y+GNDID
Sbjct: 1061 RNYLTCAVEIKTLELGLDDMDKCINGLDKAIVDFHSSKIEEVNKTLRDLWSNTYKGNDID 1120
Query: 1159 YISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
YI + ++ S + R YNYR+V K+G+E DMR R SAGQ+++A ++ R+ ++D +
Sbjct: 1121 YIELKSE----SSETRAYNYRMVMVKSGVELDMRGRSSAGQKMIASILFRIALADSFSCG 1176
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQ 1278
V+ DE T +DR + ++LA+T S L IK +D
Sbjct: 1177 CNVLALDEP----TTNLDRENI-------ESLAQTLS--------------LIIKERTD- 1210
Query: 1279 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIHLRSLLSSR 1326
FQLIVITHDEEF++ L Y R+ RD KG I S+ + +
Sbjct: 1211 --FQLIVITHDEEFVQLLNREGTEYFYRLKRDSKGNGHIERHSIYAKK 1256
>gi|255716126|ref|XP_002554344.1| KLTH0F03058p [Lachancea thermotolerans]
gi|238935727|emb|CAR23907.1| KLTH0F03058p [Lachancea thermotolerans CBS 6340]
Length = 1298
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 43/197 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+ ++ + ++ W QL+ ++ D+ Y L++ ++KYHS KM INR+I E W R
Sbjct: 1090 KDVDSIYQKEWV---QLQTKTLVTDDIDVYSKALDSAIMKYHSLKMHDINRIIDELWKRT 1146
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
Y G D+D I I +D T S + ++YNYRVV K E DMR RCSAGQ+VLA +IIRL +
Sbjct: 1147 YSGTDVDTIKIKSDEVTTSARGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASIIIRLAL 1206
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
S+ QKNFQLIVITHDE+F+ +
Sbjct: 1207 SETFGVNCGVIALDEPTTNLDEENIESLAKSLNNIIEFRRHQKNFQLIVITHDEKFLRYM 1266
Query: 1233 TAIDRA-YVVRIVRDHK 1248
A D + ++ RD +
Sbjct: 1267 GAADFTDHFYKVKRDDR 1283
>gi|156040445|ref|XP_001587209.1| hypothetical protein SS1G_12239 [Sclerotinia sclerotiorum 1980]
gi|154696295|gb|EDN96033.1| hypothetical protein SS1G_12239 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1336
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 184/384 (47%), Gaps = 32/384 (8%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+R+F + F PLTLIVG NG GKTTIIEC+K+A T P
Sbjct: 32 VRSFDHKGWENISFNTPLTLIVGLNGSGKTTIIECLKYATTGAQP--------------- 76
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
++ G F+HDP++ + E A VKL + + RS+ L+
Sbjct: 77 -----PNSKVGGAFIHDPKLCGEKEVLAQVKLSFQSTTGSRMVITRSMQLTVTKTARKMK 131
Query: 132 TRDT--TISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDE 189
T D ++ T V +G + + M + +GVS+A+L+NVIFCHQ++S WP+ E
Sbjct: 132 TLDAGLMVNNGGERTAVSHKVGEIDKI----MQSALGVSEAVLDNVIFCHQDDSLWPMSE 187
Query: 190 GKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIY 249
+K+ FD+IF+ATKY KA++S+K + ++I + A + K + + K
Sbjct: 188 PSHLKKKFDDIFEATKYTKAVDSLKSLKKDYAQQIKGMIAEEAIAKDNKDKGEKTKSRCE 247
Query: 250 NNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE 309
+ DQ EE + +M+ + E + + + + +T K +E+
Sbjct: 248 ELASQIDQLSEEALKDKANMEAVREVVDAKQRQAAEFWELVQKLRTNKERVKFSEENLES 307
Query: 310 LESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQ-ERLKSQYIQEEKQSHTHINEAQ 368
L+ IK L D+ L+S L+ + ++ E+E Q E+L++QY ++++ + +E
Sbjct: 308 LQKRIKPLSESDEW-LKSTLDQYA----DRILEMEQQDEQLQNQYRDQQQKMSANASELG 362
Query: 369 MKLGKLERDEETHKKLNDTLKTKL 392
K +L R + + + L++++
Sbjct: 363 KKQAELGRQQALKQAYEEELESRV 386
>gi|402591654|gb|EJW85583.1| hypothetical protein WUBG_03505 [Wuchereria bancrofti]
Length = 257
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 29/235 (12%)
Query: 1089 QKMRSINRLIRE---YWTRIYQLK--LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1143
++++S+N+ ++E Y I +L+ LS + DL Y ++ V+K+H+QKM IN +
Sbjct: 32 ERIKSLNKSLKETEWYVKAIPELREELSSLSHQDLANYIRAVDESVVKFHAQKMEEINEV 91
Query: 1144 IREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLA 1203
+ W ++Y GNDI+ I I ++ +EK+++YNYRVV G E DM RCSAGQ++LA
Sbjct: 92 LSSLWEQVYHGNDIETIQIKSESAGENEKKKSYNYRVVMHVGGTEIDMPGRCSAGQKMLA 151
Query: 1204 CLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFAL 1263
++IR+ +SD + +I DE NL V+++ LA+ S C
Sbjct: 152 SILIRIALSDVFCDKCSIIALDEP-TANLD------VLKVKNLGDMLADIISARC----- 199
Query: 1264 DEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDI 1317
A++ K FQLIVITHD F+E+L + R +V + +D GLS +
Sbjct: 200 -----------ANNAKMFQLIVITHDNRFVEHLRQLCRPEWVYSVSKDDAGLSRV 243
>gi|118398608|ref|XP_001031632.1| hypothetical protein TTHERM_00773790 [Tetrahymena thermophila]
gi|89285963|gb|EAR83969.1| hypothetical protein TTHERM_00773790 [Tetrahymena thermophila SB210]
Length = 1303
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 106/213 (49%), Gaps = 60/213 (28%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y + +L++ ++ D+ +Y L+ +I YH KM IN+ I + W +IYQG DI +
Sbjct: 1092 YCRALVELEVKNGLLKDIQEYLEELDKTLINYHKDKMEQINKCIADTWKKIYQGQDIVKV 1151
Query: 1161 SIAADVGTGSEKRRTYNYRVV------QKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
I A+ G K + YNYR+V + K+ E DM+ RCSAGQ+VLA +IIRL
Sbjct: 1152 EIKAEEAEGRGK-KIYNYRIVMFIYDEKDKDLKEIDMKGRCSAGQKVLASIIIRL----- 1205
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--- 1271
ALAE F+ NCGI ALDEPTTNLD
Sbjct: 1206 ----------------------------------ALAEAFTMNCGILALDEPTTNLDKLH 1231
Query: 1272 -----------IKNASDQKNFQLIVITHDEEFI 1293
I++ Q +FQLI+I+HD++FI
Sbjct: 1232 AQKLGEQLCELIESRKGQSSFQLIIISHDKDFI 1264
>gi|324501252|gb|ADY40559.1| DNA repair protein rad-50 [Ascaris suum]
Length = 1292
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 160/674 (23%), Positives = 310/674 (45%), Gaps = 98/674 (14%)
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPR----CPLCTRF 710
++ + E++L V+ L + + ++ + +YL+ + E E R CPLC R
Sbjct: 624 VISAGEDAENKLAEVSTLLTKTRNDLGQLDGCRYLYEKW-----EEEVRKTNCCPLCDRK 678
Query: 711 FESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQ---- 766
+ S L K+ K E+P++ + + + + Q L E+ P + + +L
Sbjct: 679 YGSTQEASQLATKVNRKRAELPDEIERLQRRVREYEETQNELMEVVPYVKIVKRLSQDKE 738
Query: 767 --DTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
++D KL + E VI + + +K T K KE S+Q D +L+D+
Sbjct: 739 ELESDFKVAEKKLHTIGEEVINARNDREK------TLKKKE-AFRSVQADASLMDKTWNT 791
Query: 825 LNTLQRELERQESKISGMRSTGVD---LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHN 881
L+ QRE++R ++++ GV+ L ++ A+ ++ ++ N + I+ Q ++ N
Sbjct: 792 LSEKQREIKRLKAEVDV--CDGVERRSLAELRAELEQYQHNYNDLIASIDEAQASISERN 849
Query: 882 ---EKLQSLQKQKNDIHSKQLTVQGGAGMLK----SLEDRKCELEGMDSVYQTELEELGR 934
EKL L++++ ++ K LK +L++R+ L+ +++ EL
Sbjct: 850 NLIEKLNVLRERRVELMEKSRQHDRLIESLKEKQNNLDERRINLKELNTKLPIVEAELQA 909
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTL 994
K+A ET + E L E ++ ++ A+I K++E K E+ K G L
Sbjct: 910 KLAERETTQTKGKGEESRLV-EIRRAIDAVRAQIGSIEKRMEGSKGDVTEL--KMKEGRL 966
Query: 995 TQL----AALRESVQKLNQRKEDIIAKRGVCERTINEINQ-------SIANQSLEEI--D 1041
++L + E ++ LN +++ K+ R ++ + N++LE++ D
Sbjct: 967 SELKSKIVVVDEKIRSLNGDFDNVNTKQERKRRLDEQLKKLELAARIKSLNENLEQLRWD 1026
Query: 1042 LKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE- 1100
K + LL++++ + + E L + T+ + I +K+ S + L E
Sbjct: 1027 GKPVVELLKEEQRLQRACNETSLE----MERTRGEMGQQKKRITEMKEKLNSRDFLKSEE 1082
Query: 1101 -YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
+ + ++E +I DL Y ++ ++++H++KM IN ++ W ++Y+G D++
Sbjct: 1083 DFKKEVITKCVTEKVIEDLEIYIRAMDESIVEFHAKKMEEINEVLASLWEKVYRGCDVEK 1142
Query: 1160 ISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------ 1213
+ I ++ +E+R++YNYRVV +G E DM RCSAGQ++LA ++IR+ +SD
Sbjct: 1143 VQIKSESVDETERRKSYNYRVVMFMDGKEIDMPGRCSAGQKMLASILIRIALSDVFCDKC 1202
Query: 1214 -----------------------------------QKNFQLIVITHDEEFIENLTAIDRA 1238
QK FQLIVITHD F+E+L + R
Sbjct: 1203 SIIALDEPTTNLDVLKVENLGDMLAEVIEERSVSSQKAFQLIVITHDYRFVEHLRQLCRP 1262
Query: 1239 -YVVRIVRDHKALA 1251
+V + +D L+
Sbjct: 1263 EWVYSLTKDTDGLS 1276
>gi|328852754|gb|EGG01897.1| hypothetical protein MELLADRAFT_49933 [Melampsora larici-populina
98AG31]
Length = 1303
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 213/482 (44%), Gaps = 75/482 (15%)
Query: 824 ELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEK 883
E + L+RE++R E ++ ST + V AQ + +L R ++ S T ++
Sbjct: 804 EADDLEREIQRLEFELENSGSTKTS-EVVEAQLEALTTKLAEVRKEVNSLVTERDNKRAS 862
Query: 884 LQSLQKQKN----DIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPI 939
+Q L+ Q + D+++K+ ++ G K E+ + E+ +D + + E + PI
Sbjct: 863 IQVLENQIHQIELDLNNKRQQIKEREGFEKQKEESRTEIAQLDEMIKKIDEHIRTFAEPI 922
Query: 940 ETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAA 999
+ ++EL L + E K+Q Y K L +++ I EI + + G T +
Sbjct: 923 ----SRLENELKELSARNSGAELEVVKKVQMYNKSLNQIETINREIAKFVESGIETSMQR 978
Query: 1000 LRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVA--- 1056
+ + +L Q + ++T+ +++Q E ++ +N+ L ++ +A
Sbjct: 979 CQGEIDRLEQLIKQATQMLAESQQTLIDLDQESTKAKEFERNISDNIRLRAHRDEIAGLE 1038
Query: 1057 ----------------KLNEELKLSEIMISDLTKYHHTLENCV------IKYHSQKMR-S 1093
K +EE + + +D H L + +K +M
Sbjct: 1039 SALQELDVEGAREANRKYDEEYHKARKLQADFQADHARLGGEIGMDRKNLKDKKSEMDVE 1098
Query: 1094 INRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
+ + ++ ++K EI DL KY L+ ++KYHS KM IN I+ W + YQ
Sbjct: 1099 FKDIFNRHRNQLIKVKTVEIANQDLDKYAKALDQAIMKYHSHKMAEINDTIQTLWQKTYQ 1158
Query: 1154 GNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFIS- 1212
G DID I I ++ ++ R+YNYRVV K+ +E DMR RCSAGQ+VLA +IIRL ++
Sbjct: 1159 GTDIDKILIKSE-NENAKSNRSYNYRVVMLKDQVEMDMRGRCSAGQKVLASIIIRLALAE 1217
Query: 1213 --------------------------------------DQKNFQLIVITHDEEFIENLTA 1234
DQ NFQL+VITHDE+F+ L
Sbjct: 1218 SFGTNCGILALDEPTTNLDKDNINALANALSEIIKERRDQANFQLVVITHDEDFLNQLGQ 1277
Query: 1235 ID 1236
D
Sbjct: 1278 SD 1279
>gi|324501531|gb|ADY40679.1| DNA repair protein rad-50 [Ascaris suum]
Length = 887
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 161/674 (23%), Positives = 313/674 (46%), Gaps = 98/674 (14%)
Query: 655 LVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPR----CPLCTRF 710
++ + E++L V+ L + + ++ + +YL+ + E E R CPLC R
Sbjct: 219 VISAGEDAENKLAEVSTLLTKTRNDLGQLDGCRYLYEKW-----EEEVRKTNCCPLCDRK 273
Query: 711 FESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQ---- 766
+ S L K+ K E+P++ + + + + Q L E+ P + + +L
Sbjct: 274 YGSTQEASQLATKVNRKRAELPDEIERLQRRVREYEETQNELMEVVPYVKIVKRLSQDKE 333
Query: 767 --DTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRE 824
++D KL + E VI + + +K T K KE S+Q D +L+D+
Sbjct: 334 ELESDFKVAEKKLHTIGEEVINARNDREK------TLKKKE-AFRSVQADASLMDKTWNT 386
Query: 825 LNTLQRELERQESKISGMRSTGVD---LDQVLAQQKEKKNELNTFRSKIESGQTRLNSHN 881
L+ QRE++R ++++ GV+ L ++ A+ ++ ++ N + I+ Q ++ N
Sbjct: 387 LSEKQREIKRLKAEVDV--CDGVERRSLAELRAELEQYQHNYNDLIASIDEAQASISERN 444
Query: 882 ---EKLQSLQKQKNDIHSKQLTVQGGAGMLK----SLEDRKCELEGMDSVYQTELEELGR 934
EKL L++++ ++ K LK +L++R+ L+ +++ EL
Sbjct: 445 NLIEKLNVLRERRVELMEKSRQHDRLIESLKEKQNNLDERRINLKELNTKLPIVEAELQA 504
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTL 994
K+A ET + E L E ++ ++ A+I K++E K E+ K G L
Sbjct: 505 KLAERETTQTKGKGEESRLV-EIRRAIDAVRAQIGSIEKRMEGSKGDVTEL--KMKEGRL 561
Query: 995 TQLAA----LRESVQKLNQRKEDIIAKRGVCERTINEINQ-SIA------NQSLEEI--D 1041
++L + + E ++ LN +++ K+ R ++ + +A N++LE++ D
Sbjct: 562 SELKSKIVVVDEKIRSLNGDFDNVNTKQERKRRLDEQLKKLELAARIKSLNENLEQLRWD 621
Query: 1042 LKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIRE- 1100
K + LL++++ + + E L + T+ + I +K+ S + L E
Sbjct: 622 GKPVVELLKEEQRLQRACNETSLE----MERTRGEMGQQKKRITEMKEKLNSRDFLKSEE 677
Query: 1101 -YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDY 1159
+ + ++E +I DL Y ++ ++++H++KM IN ++ W ++Y+G D++
Sbjct: 678 DFKKEVITKCVTEKVIEDLEIYIRAMDESIVEFHAKKMEEINEVLASLWEKVYRGCDVEK 737
Query: 1160 ISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------ 1213
+ I ++ +E+R++YNYRVV +G E DM RCSAGQ++LA ++IR+ +SD
Sbjct: 738 VQIKSESVDETERRKSYNYRVVMFMDGKEIDMPGRCSAGQKMLASILIRIALSDVFCDKC 797
Query: 1214 -----------------------------------QKNFQLIVITHDEEFIENLTAIDRA 1238
QK FQLIVITHD F+E+L + R
Sbjct: 798 SIIALDEPTTNLDVLKVENLGDMLAEVIEERSVSSQKAFQLIVITHDYRFVEHLRQLCRP 857
Query: 1239 -YVVRIVRDHKALA 1251
+V + +D L+
Sbjct: 858 EWVYSLTKDTDGLS 871
>gi|238880625|gb|EEQ44263.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1332
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 45/209 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+++N+ E W + L+ + ++ +D+ Y L+N ++KYHS KM INR++ E W++
Sbjct: 1123 KNVNQSYHEEWIK---LQTNLLVSNDIQIYSKALDNGIMKYHSMKMEEINRILNELWSQT 1179
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
Y+G+DI I+I +DV ++ R+YNYRVV K E DMR RCSAGQ+VLA ++IRL +
Sbjct: 1180 YKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSAGQKVLASILIRLAL 1239
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
++ Q NFQLIVITHDE+F+ ++
Sbjct: 1240 AECFGANCGMIALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQLIVITHDEKFLTHI 1299
Query: 1233 TAIDRA--YVVRIVRDHKALAETFSRNCG 1259
DR + RI RD + + +S G
Sbjct: 1300 QG-DRFTDHFYRIQRDESSKSRIYSLPIG 1327
>gi|354545490|emb|CCE42218.1| hypothetical protein CPAR2_807670 [Candida parapsilosis]
Length = 1315
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 43/197 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
++++ + E W + L+ + ++ +D+ Y L+N ++KYHS KM INR++ E W++
Sbjct: 1111 KNVDEMYHEEWIK---LQTNLLVSNDIQNYSKALDNAIMKYHSIKMEDINRILTELWSQT 1167
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
YQG DI I+I +DV ++ R+YNYRVV K+ E DMR RCSAGQ+VL+ ++IRL +
Sbjct: 1168 YQGTDISTIAIKSDVNLQAKGNRSYNYRVVMVKDSSELDMRGRCSAGQKVLSSILIRLAL 1227
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
++ Q NFQLIVITHDE F+ +L
Sbjct: 1228 AECFGSNCGIIALDEPTTNLDSENAEALATALNRVIDYRKRQSNFQLIVITHDEMFLSHL 1287
Query: 1233 TAIDRAYVVRIVRDHKA 1249
Y +I RD K+
Sbjct: 1288 RGFTDHY-YKIDRDEKS 1303
>gi|68468331|ref|XP_721725.1| hypothetical protein CaO19.1648 [Candida albicans SC5314]
gi|68468574|ref|XP_721606.1| hypothetical protein CaO19.9217 [Candida albicans SC5314]
gi|46443529|gb|EAL02810.1| hypothetical protein CaO19.9217 [Candida albicans SC5314]
gi|46443657|gb|EAL02937.1| hypothetical protein CaO19.1648 [Candida albicans SC5314]
Length = 1332
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 45/209 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+++N+ E W + L+ + ++ +D+ Y L+N ++KYHS KM INR++ E W++
Sbjct: 1123 KNVNQSYHEEWIK---LQTNLLVSNDIQIYSKALDNGIMKYHSMKMEEINRILNELWSQT 1179
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
Y+G+DI I+I +DV ++ R+YNYRVV K E DMR RCSAGQ+VLA ++IRL +
Sbjct: 1180 YKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSAGQKVLASILIRLAL 1239
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
++ Q NFQLIVITHDE+F+ ++
Sbjct: 1240 AECFGANCGMIALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQLIVITHDEKFLTHI 1299
Query: 1233 TAIDRA--YVVRIVRDHKALAETFSRNCG 1259
DR + RI RD + + +S G
Sbjct: 1300 QG-DRFTDHFYRIQRDESSKSRIYSLPIG 1327
>gi|241952833|ref|XP_002419138.1| DNA repair protein Rad50 homologue, putative [Candida dubliniensis
CD36]
gi|223642478|emb|CAX42727.1| DNA repair protein Rad50 homologue, putative [Candida dubliniensis
CD36]
Length = 1307
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 45/209 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+++N+ E W + L+ + ++ +D+ Y L+N ++KYHS KM INR++ E W++
Sbjct: 1098 KNVNQSYHEEWIK---LQTNLLVSNDIQIYSKALDNGIMKYHSMKMEEINRILNELWSQT 1154
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
Y+G+DI I+I +DV ++ R+YNYRVV K E DMR RCSAGQ+VLA ++IRL +
Sbjct: 1155 YKGSDISTIAIKSDVNLQAKGNRSYNYRVVMVKESSELDMRGRCSAGQKVLASILIRLAL 1214
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
++ Q NFQLIVITHDE+F+ ++
Sbjct: 1215 AECFGANCGMIALDEPTTNLDAENAEALAAALNRIIEYRKSQSNFQLIVITHDEKFLTHI 1274
Query: 1233 TAIDR--AYVVRIVRDHKALAETFSRNCG 1259
DR + RI RD + + +S G
Sbjct: 1275 QG-DRFTDHFYRIQRDESSKSRIYSLPIG 1302
>gi|167516572|ref|XP_001742627.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779251|gb|EDQ92865.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 104/185 (56%), Gaps = 28/185 (15%)
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG---TGSE 1171
ISDL +H L+ + KYH KM IN++I+E W Y+G+DIDYI I + G + +
Sbjct: 23 ISDLQSFHRALDRAITKYHDLKMDEINKIIKELWQNTYRGHDIDYIEIDTNWGDETSTTS 82
Query: 1172 KRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIEN 1231
KR NYRVV K DMRNRCSAGQRV+A LIIRL +++ V+T DE
Sbjct: 83 KRNAVNYRVVMIKGDTRLDMRNRCSAGQRVMASLIIRLALAEAFCINCGVMTLDEP---- 138
Query: 1232 LTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEE 1291
T +DR + N F L +N+ +K+ S Q+NFQL++ITHDE+
Sbjct: 139 TTNLDRENI----------------NSLAFCL----SNI-VKHRSQQRNFQLLIITHDEQ 177
Query: 1292 FIENL 1296
F+E L
Sbjct: 178 FLEQL 182
>gi|198427247|ref|XP_002124412.1| PREDICTED: similar to arsA arsenite transporter, ATP-binding, homolog
1, partial [Ciona intestinalis]
Length = 1106
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 183/744 (24%), Positives = 340/744 (45%), Gaps = 52/744 (6%)
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----KIQRDRLRK---EIPEIKAHYQA 233
E S+WPL EGK VK+ FD+IF AT+Y KALE I K Q+ LR E +K H +
Sbjct: 340 EESNWPLSEGKSVKQKFDDIFAATRYIKALEEIRKVQKSQKADLRDNKVESTHLKVHCEG 399
Query: 234 TLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQY 293
A K++ + K S + I + +KP+ +++L K+ + VMS Q
Sbjct: 400 -------AAEKRRNLQTTETKLQASKVSVEKITQQIKPLETHIIELRGKQSKIEVMSGQV 452
Query: 294 QTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQER----L 349
+ K+ + + +L+S IK F G +L N + +D K S+ + ER L
Sbjct: 453 EATKSRLQQMLDDEKKLKSRIKNTFHGTDEQLAQLQNDQEKIVDRKRSQQLDCERQLQPL 512
Query: 350 KSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQY 409
+ Q KQ + E Q KL ++ ++ E +K D L + ++ + L S
Sbjct: 513 EEQINDFSKQKMKYSVE-QGKLQQVVKNAEEQRKHRDEL-IRGSSEEYNISLPYIG-SDL 569
Query: 410 TPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSFKQ 469
+ +E + + QT D + ++ L+ +N + KVELE K K+
Sbjct: 570 SSQEATTFLHLFQTHADSEENKLQSLKIRLDGEQNKVEESYQESWQMKVELEEGNKHLKK 629
Query: 470 QIEGNKKDLTNVITQINEVNQSQ--STLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEA 527
+ K+ +N + + L VLQ +L + ++ ++ +S +++K I
Sbjct: 630 NLMELKEKKARTTRDLNRLQSAADNGQLDVLQNQLQQAEDQLKKVERSNQVEEMKGTIIV 689
Query: 528 WIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLL 587
++ L+ ++ +DA+I +Q + +++ +K +K+SK I+ LK + R L
Sbjct: 690 KNKEMIVLQQQVKQLDADIYSMQKSSEIRTKLEMMKKQKKSKEDLIDQLKRKCQRHLEEL 749
Query: 588 FDMIPEENFKNSLD--KALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRT 645
+ +F + + + + S ++ ++ + K S ++++K+
Sbjct: 750 -GLASHSSFPDKMKMMRWIRSKEEEVRSSRDHFDRKRSEFTEFSTKKKMVSNQIKEKKKR 808
Query: 646 LAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL----EENE 701
+L + + V GS E +L ++ E+K Q + QY++ +I KL +++E
Sbjct: 809 EEKLNETLYDVCGSDDLEQDLTQLDKEIKELQGSKGLADGIQYMYREFIKKLTNETDKSE 868
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYEN 761
CP+C R FE V LV L+TK+ PE+ ++K + + + L + KP+
Sbjct: 869 AACPICMRCFEETSEVDELVEDLQTKLNMAPEKLASQKRQLTSKQARYKVLLDNKPIKME 928
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
+ +LQ +D+P L + + + + +L++ + + K +E TA L D++
Sbjct: 929 LDRLQTSDLPDLERTFTSVSSKISDAEKDLEEAEERWQKIKEEESTAKRLLPDVS----- 983
Query: 822 IRELNTLQRELERQESKISGMRSTGVD-------LDQV------LAQQKEKKN-ELNTFR 867
++++LQ +LE E KI GM T + LDQ+ L+Q K N E++ R
Sbjct: 984 --QIHSLQSDLEEIEEKI-GMHETQLPLNSSTKTLDQMNMDKGNLSQAISKLNQEIDDLR 1040
Query: 868 SKIESGQTRLNSHNEKLQSLQKQK 891
IE+ L+ EK+ ++Q +K
Sbjct: 1041 HMIETKTNFLHQMKEKVNNIQAEK 1064
>gi|255726318|ref|XP_002548085.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134009|gb|EER33564.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1307
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 45/205 (21%)
Query: 1092 RSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRI 1151
+++N+ E W + L+ + ++ +DL Y L+N ++KYHS KM INR++ E W++
Sbjct: 1098 KNVNQNYHEEWIK---LQTNLLVSNDLQNYSKALDNAIMKYHSIKMEEINRILTELWSQT 1154
Query: 1152 YQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI 1211
Y+G+DI I+I +DV ++ R+YNYRVV K+ E DMR RCSAGQ+VLA ++IRL +
Sbjct: 1155 YRGSDIATIAIKSDVNLQAKGNRSYNYRVVMIKDTSELDMRGRCSAGQKVLASILIRLAL 1214
Query: 1212 SD---------------------------------------QKNFQLIVITHDEEFIENL 1232
++ Q NFQLIVITHD++F+ ++
Sbjct: 1215 AECFGANCGMIALDEPTTNLDAENSEALAAALTKIIEYRKAQANFQLIVITHDQKFLTHM 1274
Query: 1233 TAIDR--AYVVRIVRDHKALAETFS 1255
A DR + RI RD + + +S
Sbjct: 1275 QA-DRFTDHFYRIQRDETSKSRIYS 1298
>gi|213404310|ref|XP_002172927.1| DNA repair protein rad50 [Schizosaccharomyces japonicus yFS275]
gi|212000974|gb|EEB06634.1| DNA repair protein rad50 [Schizosaccharomyces japonicus yFS275]
Length = 1296
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 164/644 (25%), Positives = 275/644 (42%), Gaps = 114/644 (17%)
Query: 689 LFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ 748
LF K+ + + C LC R + D + + IP + + + + QL
Sbjct: 629 LFYERAIKVSDEKHACQLCRRGLD-DSERKEFTKYCNSMVLTIPSKAQDLEKELTQLETT 687
Query: 749 QRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTA 808
L+ L P+ E + L +D+ + ++ ELE++ + K+ + +LE K K +
Sbjct: 688 LNQLRSLLPIQERYIAL-SSDLEKAKKEIAELEDDFSSVSKKHKEKQASLELEKEKLQKL 746
Query: 809 LSLQGDLTLLD----------QNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKE 858
+L ++ +D ++IREL T E+ I ++ DL+ Q +
Sbjct: 747 TALSSKMSNVDRMRDEALTTGESIRELETTLSNTGTAET-IESLQEKLKDLE---TQTSQ 802
Query: 859 KKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKND----IHSKQLTVQGGAGMLKSLEDR 914
K+ E F + E + ++L SL+ +K++ + +L ++ + +L D
Sbjct: 803 KREEYRVFENAFEDAK-------KQLVSLESKKSEDSMMLRETKLRLREKQNIQMNLNDN 855
Query: 915 KCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQ 974
K LE + Q + +K++ + ++ +L++LK E + +LN K++ +Q
Sbjct: 856 KSNLEEGEIAVQN----INKKLSSNDEEMQELDKQLNSLKNEAQDELNCFSEKLRIAREQ 911
Query: 975 LEEVKRIKLEILNYTKRGTL-----------TQLAALRESVQ-KLNQRKE---------- 1012
+++ + + I N T L +Q+ E +Q K N+R E
Sbjct: 912 YTKLQSLMVAIKNDTSADALKTAEENCEQTSSQIKNFEEKIQEKTNERAEFEKKLHNLKD 971
Query: 1013 --DIIAKRGVCERTINEINQSIA-----NQSLEEIDLKN-NLTLLEKKEAVAKLNEELK- 1063
IA R +++QS++ + L+ +D +N L KE +LN +
Sbjct: 972 NERNIADNLRYRRLKQQLSQSMSRLQQLKKELQNVDRENFMLNSQNLKEKYGQLNAKRAG 1031
Query: 1064 -LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYH 1122
L E + H+T E I Y K R Y ++ + K + DL KY
Sbjct: 1032 FLGECRQLEGQIAHNTRE-LQIDYKDAKER--------YRRQLIKTKTLDKANEDLGKYG 1082
Query: 1123 HTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQ 1182
L+N ++++HS KM +NR+I E W + Y G DID I I +D T R+YNYRV
Sbjct: 1083 RALDNAIMQFHSLKMNEVNRIIDEAWKQTYCGTDIDTILIRSDNETKG--NRSYNYRVCM 1140
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------------------- 1213
K E DMR RCSAGQ+VLAC+IIRL +++
Sbjct: 1141 VKGDAELDMRGRCSAGQKVLACIIIRLALAECFGINCGILALDEPTTNLDDENICSLAQS 1200
Query: 1214 ----------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
Q+NFQLIVITHDE FI + Y R+ RD
Sbjct: 1201 LARIVEFRRRQRNFQLIVITHDERFIRLMNTESYCDYYYRVTRD 1244
>gi|321265544|ref|XP_003197488.1| DNA repair protein Rad50 [Cryptococcus gattii WM276]
gi|317463968|gb|ADV25701.1| DNA repair protein Rad50, putative [Cryptococcus gattii WM276]
Length = 1289
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 91/178 (51%), Gaps = 41/178 (23%)
Query: 1110 LSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTG 1169
+SE +DL KY L+N ++KYHS KM IN I W + YQG DID I I +D
Sbjct: 1097 ISEYANNDLEKYAKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEA 1156
Query: 1170 S-EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD--------------- 1213
S R++YNYRVV KN +E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 1157 STSTRKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEPT 1216
Query: 1214 ------------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1246
Q NFQLIVITHDE F++ L D Y R+ RD
Sbjct: 1217 TNLDQENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRD 1274
>gi|429964893|gb|ELA46891.1| hypothetical protein VCUG_01589 [Vavraia culicis 'floridensis']
Length = 1215
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 111/221 (50%), Gaps = 57/221 (25%)
Query: 1102 WTRIY-QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
++ IY K+ +IM+ DL K +E V+KY+ K+ +NR ++ W+ Y+GNDID I
Sbjct: 1027 YSEIYTHTKILDIMLKDLDKSIKAIEKSVLKYYENKIEELNRNLKYLWSNTYRGNDIDRI 1086
Query: 1161 SIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLI 1220
+ A++ + Y+Y++V KN +E +MR RCSAGQ+V+A LI RL
Sbjct: 1087 ELKAEITSSK-----YSYKLVMYKNDVELEMRGRCSAGQKVIASLIFRL----------- 1130
Query: 1221 VITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------- 1271
AL+ TFS NC + LDEPTTNLD
Sbjct: 1131 ----------------------------ALSITFSCNCNMLTLDEPTTNLDQSNIESLAR 1162
Query: 1272 -IKNASDQKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRD 1310
+K N QLI+ITHDEEF+ NL + D Y ++ R+
Sbjct: 1163 TLKYLERMSNLQLIIITHDEEFL-NLVSKDSVEYFYKVTRN 1202
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 74/316 (23%)
Query: 3 LLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSG 62
+L++L I GIR++ + + V++F P+TLI+GENG GKTTIIE +++A+T + P
Sbjct: 2 ILNKLMIRGIRSYSPNTSNVIQF-FPMTLILGENGTGKTTIIEALRYAITGDLP------ 54
Query: 63 KNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLS 122
S G FV+DP + +T+A +KL+ C D V RSL L+
Sbjct: 55 ---------------PMSRGGAFVYDPMLNSSTDTNAQIKLKL-C---DRYVVSRSLSLT 95
Query: 123 NKNGK---DNCATRDTTISRKIFAT--------------------------------GVQ 147
++ K N + I + + G++
Sbjct: 96 HRKSKIEQKNTENVFSVIVNDVASESYGNNMENLCNNEELGDALGWKKDDGANNNVEGIK 155
Query: 148 KNLGCLQQESV---LEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDAT 204
K + L ++ +M ++ +K +L++VIFCHQE S+WPL E K+ D+IF +T
Sbjct: 156 KRIKSLSGKAADIDKQMLMVLNTNKPLLDHVIFCHQEESTWPLSEPANFKKKMDDIFCST 215
Query: 205 KYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSF---- 259
Y KA+E++K +RKE ++K Q LN+ +A K++ + ++ ++
Sbjct: 216 VYIKAIENLK----NVRKEKGMQLKMKLQE-LNFALQAKKKREELLARLERANEDLMNNR 270
Query: 260 EELHNIEESMKPINEK 275
+ N+E ++ +NEK
Sbjct: 271 GTISNLEGKLRVLNEK 286
>gi|242065154|ref|XP_002453866.1| hypothetical protein SORBIDRAFT_04g020090 [Sorghum bicolor]
gi|241933697|gb|EES06842.1| hypothetical protein SORBIDRAFT_04g020090 [Sorghum bicolor]
Length = 737
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 94/170 (55%), Gaps = 43/170 (25%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ Y ++ QLK +E+ DL +Y+ L+ ++++HS KM IN++I+E W + Y+G DID
Sbjct: 538 KRYTNQLLQLKTTEMANKDLDRYYTALDKALMRFHSMKMEEINKIIKELWQQTYRGQDID 597
Query: 1159 YISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---- 1213
YISI +D G G+ R+Y+YRVV + E +MR RCSAGQ+VLA LIIRL +++
Sbjct: 598 YISINSDSEGAGT---RSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCL 654
Query: 1214 -----------------------------------QKNFQLIVITHDEEF 1228
Q+NFQLIVITHDE F
Sbjct: 655 NCGILALDEPTTNLDGPNAESLAAALLRIMEARKGQENFQLIVITHDERF 704
>gi|401884942|gb|EJT49074.1| hypothetical protein A1Q1_01723 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1204
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 114/227 (50%), Gaps = 46/227 (20%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKT-------------TIIECIK 48
A L++L I GIR+F +V+ F PLT+IVG NG GKT TIIEC+K
Sbjct: 50 AALNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTVSCLKVVEVADDQTIIECLK 109
Query: 49 FALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCE 108
+A T + P N ++ + E A V+L+
Sbjct: 110 YATTGDLPPNTKGADN-------------------------QMANEKEVKAQVRLRFWNV 144
Query: 109 NNDTVCVVRSL-LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGV 167
N + V RSL + + K G T + +++ G C + + E+ L+GV
Sbjct: 145 NRQRMTVTRSLQVTTKKTGGLTMKTLEGLLAKTDGNDG-----KCSEMDE--EVPLLLGV 197
Query: 168 SKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
SKAIL NVIFCHQE+S+WPL E +K+ FD+IF+ATKY KAL++IK
Sbjct: 198 SKAILENVIFCHQEDSNWPLSEPAALKKKFDDIFEATKYTKALDNIK 244
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 54/129 (41%)
Query: 1197 AGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
AGQ+VLA +IIRL ALAE+F +
Sbjct: 1101 AGQKVLASIIIRL---------------------------------------ALAESFGQ 1121
Query: 1257 NCGIFALDEPTTNLD--------------IKNASDQKNFQLIVITHDEEFIENLTAID-R 1301
CG+ ALDEPTTNLD I+ Q NFQLIVITHDE F++ L A D
Sbjct: 1122 GCGVLALDEPTTNLDQENINALAESLAEIIRERRRQANFQLIVITHDEGFLQRLAAHDVL 1181
Query: 1302 AYVVRIVRD 1310
Y R+ RD
Sbjct: 1182 EYYWRVSRD 1190
>gi|349605880|gb|AEQ00968.1| DNA repair protein RAD50-like protein, partial [Equus caballus]
Length = 368
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 140/297 (47%), Gaps = 80/297 (26%)
Query: 1014 IIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTL------------------ 1048
+IA+ CE+ +IN Q I Q ++E L++NLTL
Sbjct: 39 VIAQLSECEKHKEKINTDMRIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERKHHL 98
Query: 1049 --LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIY 1106
+ + + + NE +L E + D K +H+L K + +++ + +RE R
Sbjct: 99 KEMGQMQVLQMKNEHQELEEKI--DNVKRNHSLAIGRQKGYEEEIIHFKKELREPQFRDA 156
Query: 1107 QLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDI 1157
+ K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W Y+G DI
Sbjct: 157 EEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDI 216
Query: 1158 DYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI--- 1211
+YI I +D + ++KRR YNYRVV K DMR RCSAGQ+VLA LIIRL +
Sbjct: 217 EYIEIRSDADENVSAADKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAET 276
Query: 1212 ------------------------------------SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL+VITHDE+F+E L
Sbjct: 277 FCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELL 333
>gi|387593101|gb|EIJ88125.1| hypothetical protein NEQG_01569 [Nematocida parisii ERTm3]
Length = 983
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 168/347 (48%), Gaps = 68/347 (19%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+++ +L I GIR+F + + Q PLTLIVG NG GKTTI+E +K+A T P +
Sbjct: 1 MSVIGKLKIKGIRSFTEEYPAAIEMQTPLTLIVGHNGTGKTTIVEALKYATTGALPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+G FVHDPR+ ++ E A F +CE + + VVR
Sbjct: 61 NGA-FVHDPRVSQERETKAQIMMKFK-------------------SCEGKEYI-VVRG-- 97
Query: 121 LSNKNGKDNCATRDT-TISRKIFATGVQKNLGCLQQESV-LEMCNLIGVSKAILNNVIFC 178
+S GK T+ ++ ++ +G K + C + V E+ L+G + ++L +VIF
Sbjct: 98 MSQTIGKTKRETKTVESVLWQVTESG--KRMICNKLSEVDSEVPILLGSTPSVLESVIFV 155
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE S+WPL + VK+ D IF +TK+ KA++++ + LRKE K L K
Sbjct: 156 HQEESTWPLGDPSVVKKKMDGIFSSTKFIKAIDALTV----LRKE----KTGELKVLECK 207
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQ------ 292
Y N Q++ Q+ H IE+ + I E+L+ + R +S +S +
Sbjct: 208 ----------YENLQQKTQN---KHIIEQRIARITERLLVV----RKLSQVSNERLRKFQ 250
Query: 293 ---------YQTKKTERDMIQESCNELES-SIKQLFSGDKAELQSKL 329
Y+ +E +++ +EL S K+L SG ELQS L
Sbjct: 251 IDLKESQKKYEHALSEVREKEKAESELAGLSTKELLSGSVVELQSIL 297
>gi|74215662|dbj|BAE21438.1| unnamed protein product [Mus musculus]
Length = 261
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 42/167 (25%)
Query: 1108 LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVG 1167
++ +E++ DL Y+ TL+ ++K+HS KM IN++IR+ W Y+G DI+YI I +D
Sbjct: 60 MRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDAD 119
Query: 1168 ---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI------------- 1211
+ S+KRR YNYRVV K DMR RCSAGQ+VLA LIIRL +
Sbjct: 120 ENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL 179
Query: 1212 --------------------------SDQKNFQLIVITHDEEFIENL 1232
S Q+NFQL+VITHDE+F+E L
Sbjct: 180 DEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELL 226
>gi|119192416|ref|XP_001246814.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 515
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 215/478 (44%), Gaps = 112/478 (23%)
Query: 848 DLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGM 907
D D +++++ E K ++ + + + + + ++++L+ Q D+ +KQ G
Sbjct: 59 DHDAIVSEKGESKRDIESLSKTVAT----IAKYEGEIKTLKVQIQDLSTKQQQ----PGS 110
Query: 908 LKSLEDRKCELEGMDSVYQTELEELGRKVAPI--------------ETQLNLAQSELDAL 953
++LE E++ M + EL R +A I E QL +SELD
Sbjct: 111 SRTLE----EIQDMIATIGEGCRELKRAIAKITNERDQSRTEITELELQLRDVRSELDNA 166
Query: 954 KKEHKKKLNEEGAKIQDY----TKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQ 1009
+ + KK + E A++++Y TKQ E +++ +I +L V K
Sbjct: 167 RFQLDKKASIE-ARLEEYRNLNTKQRESIEKADHDI------------ESLVPEVSKAQA 213
Query: 1010 RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMI 1069
+ +DI A+ ER + + S+++ SL ++DL + E + N+ ++
Sbjct: 214 KFDDINARAEQRERELQQEVSSLSD-SLHQLDLAS--------EDIVSYNDRGGPRQLER 264
Query: 1070 SDLTKYHHTLE-NCVIKYHSQKMRSI----NRLIR-------EYWTRIYQLKLSEI---- 1113
S T E N + + KM + N+L++ +Y ++ K + I
Sbjct: 265 SKQESDRRTREYNFLSATQASKMGEMKSKDNQLLQLLADWNTDYKDAAFKFKEAHIKVET 324
Query: 1114 ---MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ DL +Y L+ ++KYHS KM INR+I E W + Y+G D+D I I +D +
Sbjct: 325 TKAAVEDLGRYGGALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSD-NENA 383
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
+ R+YNYRVV K E DMR RCSAGQ+VLA +IIRL +++
Sbjct: 384 KGNRSYNYRVVMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTN 443
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHK 1248
Q NFQLIVITHDEEF+ ++ D + Y R+ R K
Sbjct: 444 LDRDNIRSLAESLHDIIRTRQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRSDK 501
>gi|254584660|ref|XP_002497898.1| ZYRO0F16038p [Zygosaccharomyces rouxii]
gi|186703715|emb|CAQ43406.1| DNA repair protein RAD50 [Zygosaccharomyces rouxii]
gi|238940791|emb|CAR28965.1| ZYRO0F16038p [Zygosaccharomyces rouxii]
Length = 1304
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 287/630 (45%), Gaps = 105/630 (16%)
Query: 690 FNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHI--DQLCK 747
FN ++ + E C LCTR F+ + ++ +L+ E+T+ K I + L
Sbjct: 665 FNKKALEVAKTESCCYLCTRKFDDEGFKSSILLRLQ-------EKTDGKFNTILKESLES 717
Query: 748 QQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKTALETPKTKE 805
++ L L+ + ++++ L D+ I L K+ ++ ++ + EL + LE+ K +
Sbjct: 718 EKEYLNSLRNLEKDVISLNDSRSRITGLSDKVTDMRNRNVKMREELDTVNKELESMKEDK 777
Query: 806 KTALSLQGDLTLLDQNIRELNTLQRELERQESKISG----MRSTGVDLDQVLAQQKEKKN 861
A + ++ L +NI L ELE I+ RS+ ++ V Q E++N
Sbjct: 778 DHA---EKEVRPLVENIVRLRKASNELESDIKSITDELAIYRSSEGKVETVEELQNEQRN 834
Query: 862 ELNTFRS-KIESGQ------TRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDR 914
+ + R + E GQ T+ H+ L ++++ I + ++ + L+++
Sbjct: 835 KNESLRRLRKEVGQLQDERETKSKEHSNLLNLIREKDLKISEIEKSISMRKNLESDLDNK 894
Query: 915 KCELEGMDSVY---QTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDY 971
K +L+ ++ + +++E RKV ++ L + + E+ K+ + +
Sbjct: 895 KNQLKVLEETVKKLEGDVKEGSRKVNSLKVDLERKTHDFEKSLDENNKEFKAMVLNNERF 954
Query: 972 TKQLEEVKRIKLEI-LNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQ 1030
++VK + L Y K + +L + ++ + L+ E++ + I E+ +
Sbjct: 955 ISINQQVKGFTASVPLEYEK--CVAELESAKKQLVDLDHINENMNS-------GITELAK 1005
Query: 1031 SIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQK 1090
+ + + E+ +LK NL L+E + ++ + ++ +I ++ + + E+ ++ ++
Sbjct: 1006 KLNDSNREKRNLKENLDLMELRADLSSIERQIDELDIQNAEAERDRYQQESMRLRSQFER 1065
Query: 1091 MRSIN------------------RLIR--------EYWTRIYQLKLSEIMISDLTKYHHT 1124
+ S N + +R +Y + +L+ + D+ Y +
Sbjct: 1066 LSSENAGKLGERKQLQNQIDSMQQQLRTDYKDVDVKYQKQWVELQAKTFVTDDIDTYSNA 1125
Query: 1125 LENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYNYRVVQK 1183
L++ +++YH KM INR+I E W R Y G D+D I + + +VG+G K ++YNYRVV
Sbjct: 1126 LDSAIMRYHKLKMEDINRIIDELWKRTYSGTDVDTIQLRSEEVGSGV-KMKSYNYRVVMF 1184
Query: 1184 KNGIEQDMRNRCSAGQRVLACLIIRLFISD------------------------------ 1213
K E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1185 KQDAELDMRGRCSAGQKVLASIIIRLALSETFGVNCGVIALDEPTTNLDEENIESLARSL 1244
Query: 1214 ---------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1245 HNIIELRRHQKNFQLIVITHDEKFLNHMDA 1274
>gi|449329508|gb|AGE95779.1| rad50-like DNA repair protein [Encephalitozoon cuniculi]
Length = 1247
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 29/249 (11%)
Query: 1083 VIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
V Y + ++ R + Y ++K E+ DL K L+ ++ +H+ K+ +N
Sbjct: 1025 VKSYKQELLKDHGRTVENYNKCFIEVKALELSCMDLDKCIQALDKAIVDFHTSKLEEVNA 1084
Query: 1143 LIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVL 1202
+++ WT Y+G+D+D+I I T S +RTYNY+VV K G+E DMR R SAGQ+++
Sbjct: 1085 TLKDLWTNTYRGDDVDWIKIK----TESSGQRTYNYKVVFVKGGVELDMRGRSSAGQKMI 1140
Query: 1203 ACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFA 1262
A ++IRL ++D V+ D E T +DR + ++LA T SR
Sbjct: 1141 ASILIRLALADSFASSCSVLALD----EPTTNLDRDNI-------ESLAFTLSRV----- 1184
Query: 1263 LDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIHLRSL 1322
I +FQLIVITHDE+F++ L+ Y R+ R G S I S+
Sbjct: 1185 ---------ISRHRRDADFQLIVITHDEDFVQLLSRGGPEYFYRLSRSESGDSMIVRHSI 1235
Query: 1323 LSSRLLSRN 1331
+R + N
Sbjct: 1236 YGTREMGPN 1244
>gi|339240229|ref|XP_003376040.1| DNA repair protein RAD50 [Trichinella spiralis]
gi|316975266|gb|EFV58715.1| DNA repair protein RAD50 [Trichinella spiralis]
Length = 948
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 153/617 (24%), Positives = 283/617 (45%), Gaps = 94/617 (15%)
Query: 751 SLQELKPVYENIMKLQDTDIPSL---RSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+L LKP+++ + KL+ IP L R LIE E+ + +L++ + + + +
Sbjct: 369 TLVGLKPLFDIVQKLELQTIPDLEKERKLLIEKSESASQ---QLRQCEARCKIADEEYRQ 425
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQES--KISGMRSTGVDLDQVLAQQKEKKNELNT 865
A ++ D+ LD ++ +L ++ QE K SGM + +L Q + ++ +N L+
Sbjct: 426 ASAILVDVITLDSFLQYERSLCEKIAHQEEFLKASGMTMSSENLQQKI---EDVQNMLSE 482
Query: 866 FRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTV----QGGAGMLKSLEDRKCELEGM 921
+ ++ + + H + LQ+L+ + + K+ V Q A + + R+ EL +
Sbjct: 483 NEAMLQLKRKEQSKHRDMLQNLRDCAHHLTEKKQRVLNQMQQSASLRELESSRRAELSRL 542
Query: 922 DSVY---QTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV 978
++ + + ++E LGR QLN ELD+L++ + L + +++ T L ++
Sbjct: 543 ETNFTNAEKQVEILGR-------QLNERILELDSLRQNSAEILEPLKSGVENLTDSLRQL 595
Query: 979 KRIKLEILNYTKRGTLTQLAALRES-------VQKLNQRKEDIIAKRGVCERTINEINQS 1031
+ Y +QL L++ + L K D + K + ++
Sbjct: 596 DHSADHLKQYNAGKFESQLEQLKQKRMENEQIIHSLEMSKADTVNKLQIMQK-------D 648
Query: 1032 IANQSLEEIDLKNNLTLLEKKEAVAKLNEEL-----KLSEIMISDLTKYHHTL--ENC-- 1082
+ + DL + LL ++ A +L E +L M+ T+ E C
Sbjct: 649 VVRAEMRRRDLHDLKKLLGEEAAQCRLAAEAHHLQTELDSKMVPSGDTDFDTVNEEYCKK 708
Query: 1083 ------VIKYHSQKMRSINRLIREYWTRIYQ---LKLSEIMIS---------DLTKYHHT 1124
+I S+ +I+RL E + +Y+ +K + MI+ DL Y +
Sbjct: 709 LKISHELIGKKSELELTIDRLRGELESNMYKDADVKWRDKMIAHVTLEHAQNDLYHYANA 768
Query: 1125 LENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAA--DVGTGSEKRRTYNYRVVQ 1182
LE ++++H KM+ +N ++++ W +YQG+D+DYI I + D+ KRR YNYRVV
Sbjct: 769 LEQAIMQFHKIKMQEVNAILKDLWEAVYQGSDVDYIEIKSEEDLQDNFGKRRNYNYRVVM 828
Query: 1183 KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVR 1242
DMR RCSAGQ+VLA +IIR+ +++ + +T DE NL + + A + R
Sbjct: 829 HVGKEVLDMRGRCSAGQKVLASIIIRIALAEVFSTNCGFMTLDEP-TTNLDSKNSANLAR 887
Query: 1243 IVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRA 1302
+ D ++ S +K+FQLI+ITHD+ F+E +T
Sbjct: 888 ALVDL------------------------LRVRSLEKHFQLILITHDDSFVEQITRFWPV 923
Query: 1303 YVV-RIVRDHKGLSDIH 1318
V R+ ++ G S ++
Sbjct: 924 EVFYRVKKNDAGCSKLY 940
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 7 LHIMGIRNFP-ADKNRVVRFQRPLTLIVGENGCGKT 41
+ I G R+F +K + ++FQ+PLTLIVG NG GKT
Sbjct: 1 MMIRGFRSFGLEEKGQTIKFQKPLTLIVGSNGSGKT 36
>gi|297822949|ref|XP_002879357.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp.
lyrata]
gi|297325196|gb|EFH55616.1| hypothetical protein ARALYDRAFT_344958 [Arabidopsis lyrata subsp.
lyrata]
Length = 1234
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 154/636 (24%), Positives = 271/636 (42%), Gaps = 129/636 (20%)
Query: 704 CPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNN---KKTHIDQLCKQQRSLQELKPVYE 760
CP C R F +D V K + K EQ + ++ D + +Q L +L+ V+E
Sbjct: 664 CPCCERSFTTDEE-NSFVKKQRVKASTTGEQLKKLAVESSNADSVFQQ---LDKLRAVFE 719
Query: 761 NIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQ 820
KL IP L E E + + L + K + + +L L D+
Sbjct: 720 EYSKLTSEIIPLAEKSLQEHTEELGQKSQALDDVLGISAQIKADKDSIEALVHPLENADR 779
Query: 821 NIRELNTLQRELERQESKISGMRSTGV----DLDQVLAQQKEKKNELNTFRSKIESGQTR 876
+E+ + Q+++E E K+ R GV ++ L+ + K++L+ K+ Q
Sbjct: 780 TFQEIVSYQKQIEDLEYKLD-FRGLGVKTMEEIQSELSSLQSSKDKLHGELEKLRDDQIY 838
Query: 877 LNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGM---DSVYQTELEELG 933
+ LQ+ H+ + A +L+ + + +LE + S +++ L
Sbjct: 839 MERDISCLQAR------WHAVREEKAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLA 892
Query: 934 RKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGT 993
+ P+ + S+ + +K ++ E K ++Y +++E + + +I Y
Sbjct: 893 EALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRNYQQEVEALLKASSKINEYA-YSC 951
Query: 994 LTQLAALRESVQKLNQRKEDIIAKRGV-------CERTINEINQSI-------ANQSLEE 1039
T+ L++ ++LN DI K+ + CE NE+ + NQ
Sbjct: 952 FTRYHDLKKG-ERLN----DIQEKQRLSESQLQSCEARKNELAGELNRNKDLMRNQDQLR 1006
Query: 1040 IDLKNNLTLLEKKEAVAKLNEELKLSEIMI------SDLTKYHHTLENCVIKYHSQKMRS 1093
++++NL K V +L + L +M+ ++ Y ++ ++ + + +
Sbjct: 1007 RNIEDNLNYRTTKAKVEELTP-IHLFSMMLRLNRCRGTVSVYESSISKNRVELKAAQYKD 1065
Query: 1094 INRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQ 1153
I++ ++ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W + Y+
Sbjct: 1066 IDK---RHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYR 1122
Query: 1154 GNDIDYISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFIS 1212
G D+DYI I +D G G+ R+Y+Y+V LA LIIRL
Sbjct: 1123 GQDMDYIRIHSDSEGAGT---RSYSYKV---------------------LASLIIRL--- 1155
Query: 1213 DQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDI 1272
ALAETF NCGI ALDEPTTNLD
Sbjct: 1156 ------------------------------------ALAETFCLNCGILALDEPTTNLDG 1179
Query: 1273 KNASD--------------QKNFQLIVITHDEEFIE 1294
N+ Q+NFQLIVITHDE F +
Sbjct: 1180 PNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQ 1215
>gi|71400066|ref|XP_802939.1| DNA repair protein RAD50 [Trypanosoma cruzi strain CL Brener]
gi|70865366|gb|EAN81493.1| DNA repair protein RAD50, putative [Trypanosoma cruzi]
Length = 631
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 202/470 (42%), Gaps = 117/470 (24%)
Query: 848 DLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQS----LQKQKNDIHSKQLTVQG 903
+L++VLA+ K ++N + I +GQ L +LQS LQ+ + D + Q
Sbjct: 191 ELEEVLARYKGEENGYRERIAAINAGQEGLREELLRLQSRLDTLQRARQD---AECAAQQ 247
Query: 904 G------------AGMLKSLEDRKCELEG---MDSVYQTELEELGRKVAPIET-QLNLAQ 947
G G+L + D G + Q +L E R A E QL A
Sbjct: 248 GRIGKIEESARMLVGILPKMRDYFASKHGEQLFRAREQMQLAEASRLRAVDEVRQLREAI 307
Query: 948 SELDALKKEHKKKLNEEGAKIQDYTKQ---------LEEVKRIKLEILNYTKRGTLTQLA 998
E + E ++ E G I+ + ++ L+EV+R E+ + RG L
Sbjct: 308 QESRRVVDEQHRQAVEVGKHIEAFKRRQSIGEDQARLQEVERSLTEMKSREIRGVAAILG 367
Query: 999 ALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKL 1058
A D+IA T++ I + I + ++ LE+ A +
Sbjct: 368 A-------------DVIAGE-----TVSRIRELI----------REKVSELERSRAQQEG 399
Query: 1059 NEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDL 1118
N E M+ D+ L KYH + R Y + +++ +EI ++D+
Sbjct: 400 N-----VEAMMQDIANLRSQLARE--KYHDIEKR--------YRSTFLKVQTTEIAVADI 444
Query: 1119 TKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYN 1177
KY+ LE V YH +K+ IN+++ + W + Y+G+DID + + + D T + RR+Y+
Sbjct: 445 EKYYRALEKAVQSYHQEKIAQINQILADLWRQTYKGSDIDTVELRSEDDVTSTTARRSYS 504
Query: 1178 YRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ----------------------- 1214
YRVV K+ E DMR RCSAGQ+VLA ++IRL +S+
Sbjct: 505 YRVVMKRGNSEMDMRGRCSAGQKVLASVLIRLALSEAFCCDCGILALDEPTTNLDEDNAR 564
Query: 1215 ----------------KNFQLIVITHDEEFIENLT--AIDRAYVVRIVRD 1246
K+FQLIVITHDE+F+ L A+D Y + RD
Sbjct: 565 SLAESLRLLIENHRAVKHFQLIVITHDEQFVRALGGQALDTFYYIHKDRD 614
>gi|393909326|gb|EJD75408.1| hypothetical protein LOAG_17434 [Loa loa]
Length = 223
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 26/204 (12%)
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRR 1174
I DL Y ++ V+++H+QKM IN ++ W ++Y GNDI+ I I ++ +EK++
Sbjct: 31 IEDLANYIRAVDKSVVEFHTQKMEEINEVLSSLWEQVYHGNDIEAIQIKSESAGENEKKK 90
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTA 1234
+YNYRVV G E DM RCSAGQ++LA ++IR+ +SD + +I DE NL
Sbjct: 91 SYNYRVVMYVGGTEIDMPGRCSAGQKMLASILIRIALSDVFCDKCSIIALDEP-TANLD- 148
Query: 1235 IDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
V++ + D LA+ S C A++ + FQLIVITHD F+E
Sbjct: 149 -----VLKNLGD--MLADIISARC----------------ANNARMFQLIVITHDNRFVE 185
Query: 1295 NLTAIDRA-YVVRIVRDHKGLSDI 1317
+L + R +V + +D GLS +
Sbjct: 186 HLRQLCRPEWVYSVSKDDTGLSRV 209
>gi|452821102|gb|EME28136.1| DNA repair protein RAD5 [Galdieria sulphuraria]
Length = 1320
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 47/199 (23%)
Query: 1086 YHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIR 1145
+ +Q RS N + RE ++ +LK ++ + DL +YH+ L+ ++ +H+ KM+ IN++++
Sbjct: 1107 HKAQSTRS-NEMYRE---KLVELKTLDLSLKDLEQYHNALDRSLMTFHTLKMKEINKVVK 1162
Query: 1146 EYWTRIYQGNDIDYISIAADVGTG-SEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLAC 1204
E W Y+G DIDYI I +D S +R+YNYRV+ + +MR RCSAGQ++LA
Sbjct: 1163 ELWQATYRGKDIDYIEIVSDSEMDQSGSKRSYNYRVLMHRGDASLEMRGRCSAGQKILAS 1222
Query: 1205 LIIRLFISD---------------------------------------QKNFQLIVITHD 1225
L+IRL +++ Q+NFQLI+ITHD
Sbjct: 1223 LVIRLALAESFCLECGILALDEPTTNLDKENIESLANALSDIIRARRIQENFQLILITHD 1282
Query: 1226 EEFIENLTA---IDRAYVV 1241
E FIE L + D Y+V
Sbjct: 1283 EHFIELLGSREVTDTYYLV 1301
>gi|341882968|gb|EGT38903.1| hypothetical protein CAEBREN_31573 [Caenorhabditis brenneri]
Length = 1333
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 113/245 (46%), Gaps = 64/245 (26%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y I +L L E I DL KY L+ +I +H++KM ++N +I E W ++Y DI I
Sbjct: 1113 YRDAIIELALHEEAIEDLNKYRKCLDASLITFHTEKMAAVNVIIDELWRKVYNSTDITTI 1172
Query: 1161 SIAADVGTGS-EKRRTYNYRVVQ-KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
I +D + S K+ Y+Y V+ ++G E +MR RCSAGQ++LA L+IR+
Sbjct: 1173 RIRSDAASESTSKKVAYDYNVMMVYESGSEVEMRGRCSAGQKMLASLLIRI--------- 1223
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD------- 1271
ALAE F C + ALDEPTTNLD
Sbjct: 1224 ------------------------------ALAEVFGGLCSMIALDEPTTNLDEWKVDGM 1253
Query: 1272 ---------IKNASDQ------KNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLS 1315
+ DQ ++ Q++VITHDE + LT R Y+ + +D G+S
Sbjct: 1254 ANVLSDLIEARRGYDQDGNLRGRDMQMVVITHDERLVNKLTISCRPEYIYCLAKDEHGVS 1313
Query: 1316 DIHLR 1320
+ R
Sbjct: 1314 YLSKR 1318
>gi|449677079|ref|XP_002160990.2| PREDICTED: DNA repair protein RAD50-like, partial [Hydra
magnipapillata]
Length = 1104
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 182/820 (22%), Positives = 365/820 (44%), Gaps = 89/820 (10%)
Query: 160 EMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDR 219
E+ + +GV ++L NVIFCHQE+++WPL EGK +K+ FD IF ATKY +ALE I+
Sbjct: 233 EIVSRLGVPMSVLENVIFCHQEDANWPLSEGKILKQKFDSIFAATKYIQALECIR----N 288
Query: 220 LRKEIPEIKAHYQATLNYKKEADSKKQLIYNN---TQKRDQSF-EELHNIEESMKPINEK 275
LRK+ ++ Y L + + K Q I ++ Q + Q+ ++L I +M+PI +
Sbjct: 289 LRKDQVQLVKDYNRDLVHLTQKKDKAQEIQSDLCRAQGQLQTTKDQLKKIVSAMQPIECQ 348
Query: 276 LVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKIN 335
L QL + +S + ++ E ++ + L+ +++ + SG + +++ KLN + N
Sbjct: 349 LEQL-------NSVSEEVFKREKELGTLEATKEHLKKNLQTMISGFETDIK-KLNETRAN 400
Query: 336 LDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNL 395
LD + H GKL+++ +TH L + +
Sbjct: 401 LD---------------------KEH----------GKLQQEAQTHSVLVAERDNFIKKI 429
Query: 396 ADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIV 455
+ L L + +TPE + ++ + +S+ K + NT + EI
Sbjct: 430 SSKLDLSGFNEDTFTPECADQFLQKLKDLFQSIVSEGKKSRSNYESQLNTLEEEIKNCEK 489
Query: 456 EKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKS 515
E +E + + I N + + + ++ + + LQ L+++ V E+D+ +S
Sbjct: 490 EINGIEGAVNEKQSIINNNLVKIRRIENDLGSLSSTATRLQSLESQSKTVKEELDEYKQS 549
Query: 516 LDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINL 575
+D + + +IE ++ E + +L + E S++ Q+ ++S + SK +I
Sbjct: 550 VDSNTINKDIERLKIKKKEADAKLAKLKQEQSMIYQQSKAQNNVESFLKDQVSKRDNIEA 609
Query: 576 LKERHDRAFHLLFD---MIPEENFKNSLDKALSSITFDINRIQEDINAKEKH------LY 626
L H LF + P+E+ K L T+ + E N ++KH L
Sbjct: 610 LLNTHLPKLESLFGFKKVPPKEDLKKEL------YTYIKKKESEVKNERQKHFEVAQRLA 663
Query: 627 TLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTST 686
E+N L++++ + + V + D + ++++ + M +
Sbjct: 664 GFESNQKTIINQLKEKELEFQKKEKEVYNVCKDNNYSTYKDSIQQKIEKISNSLVEMGAF 723
Query: 687 QYLFNSYIGKLEE---NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHID 743
+ ++ YI KL++ E CPLC R F++ V L+ +L K++ +P++ + I+
Sbjct: 724 EKIYQKYISKLQQENSQEKGCPLCHREFKNTKEVKNLIEELSCKLESVPKKRLQNEKLIE 783
Query: 744 QLCKQQRSLQELKPVYENI---MKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALE- 799
+ + L+ L P+ ++ K+ + D RS I++ + + + +LK+L T +E
Sbjct: 784 EEKNLHKKLESLIPIKASLDEKFKIAEGDEKKARSMEIDISK-INDYISDLKELDTKIER 842
Query: 800 ---------TPKTKEKTALSL---QGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV 847
+T + A ++ + ++ +NI L + + E RS +
Sbjct: 843 ERINLVGIMPGRTLQSIADAVNDAESEVGNFSKNINVQEQLDEKFKIAEGDEKKARSMEI 902
Query: 848 DLDQVLAQQKEKKNELNTFRSKIESGQTRLNS--HNEKLQSLQKQKNDIHSKQLTVQGGA 905
D+ ++ + ++L +KIE + L LQS+ ND S +L +Q
Sbjct: 903 DISKI----NDYISDLKELDTKIERERINLVGIMPGRTLQSIADAVNDAES-ELFLQSKL 957
Query: 906 GMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNL 945
+LE + EL+ + Y E+++ K+ P+ ++L++
Sbjct: 958 QERLTLESQLKELKSTNETYNHEIKDSSIKLQPLRSKLSV 997
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTT 42
MAL++++ I GIR++P + V+ FQ PLTLIVG+NG GKT
Sbjct: 1 MALIEKMQIQGIRSYPPHDSAVIEFQTPLTLIVGKNGTGKTA 42
>gi|308503629|ref|XP_003113998.1| CRE-RAD-50 protein [Caenorhabditis remanei]
gi|308261383|gb|EFP05336.1| CRE-RAD-50 protein [Caenorhabditis remanei]
Length = 1311
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 63/239 (26%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y I ++ L + ISDL KY L+ +I++H++KM ++N +I E W ++Y DI I
Sbjct: 1092 YRDAIIEIALVKESISDLEKYRKCLDVSLIQFHTEKMTAVNVIIDELWRKVYNSTDITTI 1151
Query: 1161 SIAADVGTGSEKRRTYNYRVVQ-KKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQL 1219
I +D + + +R Y+Y V+ +++G E +MR RCSAGQ++LA L+IR+
Sbjct: 1152 RIRSDAASETTSKRAYDYNVMMVQESGAEVEMRGRCSAGQKMLASLLIRI---------- 1201
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD-------- 1271
ALAE F C + ALDEPTTNLD
Sbjct: 1202 -----------------------------ALAEVFGGLCSMIALDEPTTNLDEGKVDGMA 1232
Query: 1272 --------IKNASDQ------KNFQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLS 1315
+ + D+ ++ Q+++ITHDE + +T R Y+ + +D G+S
Sbjct: 1233 NVLSDLIAARRSYDEDGNVRGRDMQMVIITHDERLVNKITLGCRPEYIYCLGKDEHGVS 1291
>gi|378755672|gb|EHY65698.1| hypothetical protein NERG_01305 [Nematocida sp. 1 ERTm2]
Length = 1278
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 27/212 (12%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
+ +L + GIR F ++ + PLTLIVG NG GKTTI+E +K+A T P A +G
Sbjct: 3 IKKLKLFGIRAFTQEQPAALEMHAPLTLIVGHNGTGKTTIVEALKYATTGGLPPNARNGA 62
Query: 64 NFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSN 123
FVH DPRI ++ ET A + ++ T D VVR LS
Sbjct: 63 -FVH--------------------DPRISQERETKAQIMMKFTSCAGDEYIVVRG--LSQ 99
Query: 124 KNGKDNCATRDT-TISRKIFATGVQKNLGCLQQESV-LEMCNLIGVSKAILNNVIFCHQE 181
GK T+ T ++ K+ TG K + C + V LE+ L+G + +L NVIF HQE
Sbjct: 100 TLGKIKRETKTTESVLWKVERTG--KRMICNKLSEVDLEVPILMGTTGPVLENVIFVHQE 157
Query: 182 NSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
S+WP + VK+ D IF ++++ KA++++
Sbjct: 158 ESAWPFSDPSAVKKKIDGIFSSSRFVKAIDAL 189
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 34/200 (17%)
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRR 1174
ISDL KY +++ +++YH++K+ +N +I+E W Y+G DID I I + +
Sbjct: 1100 ISDLEKYIQSVQAAIVRYHAEKLAEVNAIIKEIWCIAYKGTDIDEIKIISHMDK------ 1153
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTA 1234
Y +V KNG E DMR R SAGQ+V+A ++IRL +++ + +T D E T
Sbjct: 1154 --TYSLVMVKNGSEIDMRGRVSAGQKVIASIVIRLALAEAFSVNCGFLTLD----EPTTN 1207
Query: 1235 IDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
+D+ + + KAL+ I+ + NFQL+VITHDE+F+
Sbjct: 1208 LDKENIAGLA---KALSSI------------------IQARKAEGNFQLLVITHDEDFVR 1246
Query: 1295 NLTAID-RAYVVRIVRDHKG 1313
L + + Y R+ RD G
Sbjct: 1247 ELLSTECTEYFYRLERDTIG 1266
>gi|298708489|emb|CBJ30613.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 448
Score = 116 bits (291), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 99/197 (50%), Gaps = 41/197 (20%)
Query: 1077 HTLENCVIKYHSQKMRSINRLIREYWTR-IYQLKLSEIMISDLTKYHHTLENCVIKYHSQ 1135
H L+ + Y ++ R I E R + + + +E+ ++DL KY L+ ++++H+
Sbjct: 211 HGLKGQIRGYEAKLNSDTYRNIEEKHRRKMIEHRTTEMAVTDLDKYWTALDKALLRFHTM 270
Query: 1136 KMRSINRLIREYWTRIYQGNDIDYISI-AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNR 1194
K+ IN++IRE W Y G DID I I + D + +R+YNYRVV +KN DM+ R
Sbjct: 271 KIADINKIIRELWAMTYSGEDIDMIEIVSGDDEDSGKAKRSYNYRVVMRKNDATLDMKGR 330
Query: 1195 CSAGQRVLACLIIRLFI---------------------------------------SDQK 1215
CSAGQRVLA ++IRL + S Q
Sbjct: 331 CSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHNNKVGLAHALAKIISSRSKQA 390
Query: 1216 NFQLIVITHDEEFIENL 1232
NFQLI ITHDEEF++ +
Sbjct: 391 NFQLITITHDEEFVQTM 407
>gi|164663069|ref|XP_001732656.1| hypothetical protein MGL_0431 [Malassezia globosa CBS 7966]
gi|159106559|gb|EDP45442.1| hypothetical protein MGL_0431 [Malassezia globosa CBS 7966]
Length = 1164
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 41/176 (23%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y ++ +K++ + DL Y L+ +++YH+ KM +N+ + W + YQG DID I
Sbjct: 1016 YMRQLVHIKVAGMANHDLDIYCGALQQAILQYHAIKMEEVNQTLDYLWKKTYQGTDIDSI 1075
Query: 1161 SIAADVG--TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQ 1218
SI +D + R+Y YRV K+ +E DMR RCSAGQ+VLAC++IRL
Sbjct: 1076 SIRSDTEGRVSANGLRSYQYRVCMVKDAVELDMRGRCSAGQKVLACILIRL--------- 1126
Query: 1219 LIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
ALA++F +CG ALDEPT NLD +N
Sbjct: 1127 ------------------------------ALADSFGGSCGFMALDEPTANLDREN 1152
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%)
Query: 160 EMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDR 219
EM +L+GVS AIL NV+FCHQE S+WPL E +K+ FDEIF+ ++Y KAL+SI+ R +
Sbjct: 73 EMASLLGVSHAILENVLFCHQEESNWPLSEPAILKKRFDEIFEVSRYTKALDSIRALRKQ 132
Query: 220 LRKEIPEIKAHYQATLNYKKEADSKKQLI 248
++ +A +A N K+ A++ + I
Sbjct: 133 RAQDARVDEAELRALQNEKERAENIRATI 161
>gi|407042503|gb|EKE41365.1| RecF/RecN/SMC N terminal domain containing protein [Entamoeba
nuttalli P19]
Length = 1241
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 32/218 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M D+L I GIR+ DK + F +PLTLI G NG GKTTIIE +++A T P ++
Sbjct: 1 MTTFDKLEIAGIRSINPDKPVEIEFFKPLTLITGPNGAGKTTIIESVRYACTGTPPPNSN 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
G+ FV DP + + A N D GK + + R L
Sbjct: 61 GGRLFVRDPTMSATKKTDAYI--NLSLDTSKGK-------------------LTISRKLG 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+S GK ++++ + + + N G L + I S +L++V+FCHQ
Sbjct: 100 VSISLGKTKFSSKEAKLE--LDGQKHEINDGTL--------TSTIETSAVMLDSVLFCHQ 149
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESI-KIQR 217
E+S WP +E KK+KE FD++F + Y K L+ + K+Q+
Sbjct: 150 EDSFWPFEEPKKLKEKFDDVFGTSNYTKFLDDVSKLQK 187
>gi|67474252|ref|XP_652875.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469773|gb|EAL47489.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449709485|gb|EMD48743.1| DNA double strand break repair Rad50 ATPase, putative [Entamoeba
histolytica KU27]
Length = 1241
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 108/228 (47%), Gaps = 61/228 (26%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M D+L I GIR+ DK + F +PLTLI G NG GKTTIIE +++A T P
Sbjct: 1 MTTFDKLEIAGIRSINPDKPVEIEFFKPLTLITGPNGAGKTTIIESVRYACTGTSP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+++ GK FV DP + +T A + +L
Sbjct: 57 ----------------PNSNGGKLFVRDPTMSATKKTDAYI----------------NLS 84
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQ---QESVLEM------------CNLI 165
L GK TISRK+ GV NLG + +E+ LE+ + I
Sbjct: 85 LDTSKGK-------LTISRKL---GVSINLGKTKFSAKEAKLELDGQKHDINDGTLTSTI 134
Query: 166 GVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
S +L++V+FCHQE+S WP +E KK+KE FD++F + Y K L+ +
Sbjct: 135 ETSAVMLDSVLFCHQEDSFWPFEEPKKLKEKFDDVFGTSNYTKFLDDV 182
>gi|313231327|emb|CBY08442.1| unnamed protein product [Oikopleura dioica]
Length = 1335
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 29/222 (13%)
Query: 1 MALLDQLHIMGIRNF-PADKNRV-VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M L + I GIR+ P +++ V ++FQRP TLI G+NG GKTTIIEC+K+A + +P G
Sbjct: 1 MVFLKTIKISGIRSIGPGEEHEVEIKFQRPFTLISGQNGAGKTTIIECLKYATSGSFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GKK +A N P + +++ C V + R
Sbjct: 61 TTKA------TVTGKKRKAV-----NTTKVPA-----QVFLELEIPSECGKPQLVQINRK 104
Query: 119 LLLSNKNGKDNCATRDTTISRK------IFATGVQKNLGCLQQESVLEMCNLIGVSKAIL 172
L + K+G + + TI+ K I ++ VQK +E + L+GV+K +L
Sbjct: 105 LEGTLKDGDFTTKSLEGTITVKDKRSGEIISSKVQKV-----EELNKHIRGLLGVNKPVL 159
Query: 173 NNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
+FCHQ+ + WP +E K +K FDEIF + +Y K+LE IK
Sbjct: 160 EYAVFCHQDETLWPFEEAKLLKAKFDEIFQSAEYVKSLEQIK 201
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 60/225 (26%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
RE++ ++++ E DL K+ L +I+ H ++M +N +I W YQG+DID
Sbjct: 1116 REFFRSTIRVRIEESFARDLDKFSKALGTAIIEVHQKQMTKLNSIITSLWKTSYQGSDID 1175
Query: 1159 YISIAA-DVGTGSEKRRTYNYRV-VQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKN 1216
ISI+A D G+ R +Y V + + +G MR R SAGQR+LA L++RL
Sbjct: 1176 TISISAKDTRVGASTRSNMDYCVNMHRPDGAVLSMRGRASAGQRMLASLVLRL------- 1228
Query: 1217 FQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD----- 1271
AL ETFS + GI LDEPTTNLD
Sbjct: 1229 --------------------------------ALMETFS-SSGILTLDEPTTNLDKDAIR 1255
Query: 1272 ------IKNASDQKNF----QLIVITHDEEFIE---NLTAIDRAY 1303
+ A + + Q I+ITHD+EF E +L ++ AY
Sbjct: 1256 KFAETVVSLAKTARGYNMKTQFIIITHDKEFTEILQDLATVEAAY 1300
>gi|145512287|ref|XP_001442060.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409332|emb|CAK74663.1| unnamed protein product [Paramecium tetraurelia]
Length = 1237
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 105/226 (46%), Gaps = 57/226 (25%)
Query: 1114 MISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEK- 1172
ISDL KY LE +++ H QKM+ IN+ + + W +IY G DI +I + D +K
Sbjct: 1048 FISDLKKYLQILEATMLECHGQKMKEINKYLLDTWQKIYNGQDIKFIEVKFDEIPNQKKI 1107
Query: 1173 RRTYNYRVVQKK-NGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIEN 1231
+ YNYR+V + N E DM+ RCS GQ++LA ++ R+
Sbjct: 1108 SKKYNYRLVMRTMNNTEIDMKGRCSMGQKMLASIVFRM---------------------- 1145
Query: 1232 LTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD---IKNASDQKN-------- 1280
ALAE F NC ALDEPT+NLD IK ++Q N
Sbjct: 1146 -----------------ALAECFGSNCCFLALDEPTSNLDRKHIKTLAEQLNSLIELMKQ 1188
Query: 1281 ----FQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIHLRSL 1322
QLI+ITHD + ++ L +Y + I + G S I R +
Sbjct: 1189 HEQQIQLIIITHDMDLVKLLKRHSESYYM-ISKKENGFSGIEERKI 1233
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 42/243 (17%)
Query: 1 MALLDQLHIMGIRNF------------PADKNRVVRFQRPLTLIVGENGCGKTTIIECIK 48
M+ L L + GIR++ A +++ + F++PLTLI G NG GKTTIIE ++
Sbjct: 1 MSSLLHLKLDGIRSYCHVGQVKEDSRRAAQQSQSIYFKQPLTLIWGHNGSGKTTIIEALR 60
Query: 49 FALTNEYPQGASSGKNFVHDPRIGKKDEASASSGKNF--VHDPRIGKKDETHAIVKLQCT 106
T P + G++F+ D + + + A +F +++ I + + +
Sbjct: 61 TITTGMQPPNSEKGRSFLTDSHLLGQSKTDACIELSFKSINNREIVARRHFSIVYDSPNS 120
Query: 107 CENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIG 166
C+ +RS L + D T +T ++K + C +G
Sbjct: 121 CK----FSSLRSTLQTRSLETDKLETLHST------CANIEKQIPC-----------FLG 159
Query: 167 VSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPE 226
VS ILNNV+ CHQE W + +K IFDE+F+ T L +I++ RLR+++ E
Sbjct: 160 VSVPILNNVLLCHQEEQLWMFSDNSTLKGIFDELFETT----DLVNIEV---RLREQLKE 212
Query: 227 IKA 229
++
Sbjct: 213 AES 215
>gi|295443032|ref|XP_001713090.2| DNA repair protein Rad50 [Schizosaccharomyces pombe 972h-]
gi|259016326|sp|Q9UTJ8.3|RAD50_SCHPO RecName: Full=DNA repair protein rad50
gi|254745547|emb|CAB96041.3| DNA repair protein Rad50 [Schizosaccharomyces pombe]
Length = 1285
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 87/172 (50%), Gaps = 46/172 (26%)
Query: 1117 DLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRT 1175
DL KY L+ +++ HS KM INR++ E W + Y G DID I I +D G G+ RT
Sbjct: 1106 DLGKYAKALDVAIMQLHSMKMNEINRIVDELWKQTYCGTDIDTILIRSDSEGKGN---RT 1162
Query: 1176 YNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------------- 1213
YNYRV K E DMR RCSAGQ+VLAC+IIRL +++
Sbjct: 1163 YNYRVCMVKGDAELDMRGRCSAGQKVLACIIIRLALAECLGVNCGILALDEPTTNLDEEN 1222
Query: 1214 -----------------QKNFQLIVITHDEEFIENLTAIDR--AYVVRIVRD 1246
Q NFQLIVITHDE+FI L D +Y R+ RD
Sbjct: 1223 ICSLAKNLSRIVEFRRKQANFQLIVITHDEQFI-RLVNSDAYCSYYYRVKRD 1273
>gi|219118128|ref|XP_002179845.1| RAD50 recombination protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408898|gb|EEC48831.1| RAD50 recombination protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1436
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 186/412 (45%), Gaps = 59/412 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGK----TTIIECIKFALTNEYP 56
MA +++L I GIR+F + V ++ + K T II C + ++ +
Sbjct: 1 MASVNKLSIRGIRSFSPEDAEQVSHDLAFSVEYDADTHAKLDRHTHIIVCRTRSSSSTFR 60
Query: 57 QGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVV 116
+ SG+ D I +G+ FVHDPR + + A VKL+ T + T+ VV
Sbjct: 61 AQSLSGQT---DAEITGSFPPGNKAGQAFVHDPRTIGQPQVKANVKLRFTSRSGQTMVVV 117
Query: 117 RSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
RS+ ++ K D + TG + +L E ++ L+GVSK+IL +V+
Sbjct: 118 RSMEVNQKKTAMTFKQLDGVLRMMDPNTGQRVSLSHKCTELDKQLPALLGVSKSILEHVV 177
Query: 177 FCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI----------------------- 213
FCHQE++SWPL EG +K+ FD+IFD+T+Y KAL++
Sbjct: 178 FCHQEDASWPLMEGAVLKKRFDDIFDSTRYTKALDAFRKTEKEMTATVKDLKIELAGLNS 237
Query: 214 -KIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPI 272
KI D RK++ YQ L +E +KQ + + D+ + IE + +
Sbjct: 238 SKIAADGFRKDL----VGYQEALETLEE---EKQQVVEGIAEADRDIQVYQGIEAKINNV 290
Query: 273 NEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLF 332
+ K+ L ++ + Q + T + M++E + S + EL+ L+ F
Sbjct: 291 DAKIDSLKNQQAQL------VQVRMTRQQMLEEDLTKKHS---------QQELEQMLDDF 335
Query: 333 KINLDEKCSELENQERLKSQYIQEEKQSHTHINEA---QMKLGKLERDEETH 381
+ E +L+ ++++ +Y EK+ T +E LGKL ++E H
Sbjct: 336 GGKVSE---QLDQHQKMQQRYEGMEKEVDTLRHEEIRLNSLLGKLSAEKEAH 384
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 39/158 (24%)
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
++I DL KY + L+ ++K+H K+ IN+++RE W Y+G DI I + + GS
Sbjct: 1234 TQIASEDLKKYGNALDKAILKFHHVKIDDINKIVRELWLLTYKGEDISSIELVSGQEAGS 1293
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI------------------- 1211
+++YNYRVV K + DMR RCSAGQRVLA ++IRL +
Sbjct: 1294 RAQKSYNYRVVMTKGTSKLDMRGRCSAGQRVLASIVIRLALAETFCINCGCIALDEPTVN 1353
Query: 1212 --------------------SDQKNFQLIVITHDEEFI 1229
S Q+NFQLI+ITHDEEF+
Sbjct: 1354 LDHRTKKGLAVALAQIIASRSQQRNFQLILITHDEEFV 1391
>gi|219118130|ref|XP_002179846.1| Rad50 DNA repair/recombination protein [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408899|gb|EEC48832.1| Rad50 DNA repair/recombination protein [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 1387
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 39/158 (24%)
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
++I DL KY + L+ ++K+H K+ IN+++RE W Y+G DI I + + GS
Sbjct: 1185 TQIASEDLKKYGNALDKAILKFHHVKIDDINKIVRELWLLTYKGEDISSIELVSGQEAGS 1244
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFI------------------- 1211
+++YNYRVV K + DMR RCSAGQRVLA ++IRL +
Sbjct: 1245 RAQKSYNYRVVMTKGTSKLDMRGRCSAGQRVLASIVIRLALAETFCINCGCIALDEPTVN 1304
Query: 1212 --------------------SDQKNFQLIVITHDEEFI 1229
S Q+NFQLI+ITHDEEF+
Sbjct: 1305 LDHRTKKGLAVALAQIIASRSQQRNFQLILITHDEEFV 1342
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 154/328 (46%), Gaps = 52/328 (15%)
Query: 81 SGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRK 140
+G+ FVHDPR + + A VKL+ T + T+ VVRS+ ++ K D +
Sbjct: 33 AGQAFVHDPRTIGQPQVKANVKLRFTSRSGQTMVVVRSMEVNQKKTAMTFKQLDGVLRMM 92
Query: 141 IFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEI 200
TG + +L E ++ L+GVSK+IL +V+FCHQE++SWPL EG +K+ FD+I
Sbjct: 93 DPNTGQRVSLSHKCTELDKQLPALLGVSKSILEHVVFCHQEDASWPLMEGAVLKKRFDDI 152
Query: 201 FDATKYNKALESI------------------------KIQRDRLRKEIPEIKAHYQATLN 236
FD+T+Y KAL++ KI D RK++ YQ L
Sbjct: 153 FDSTRYTKALDAFRKTEKEMTATVKDLKIELAGLNSSKIAADGFRKDL----VGYQEALE 208
Query: 237 YKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTK 296
+E +KQ + + D+ + IE + ++ K+ L ++ + Q +
Sbjct: 209 TLEE---EKQQVVEGIAEADRDIQVYQGIEAKINNVDAKIDSLKNQQAQL------VQVR 259
Query: 297 KTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQE 356
T + M++E + S + EL+ L+ F + E +L+ ++++ +Y
Sbjct: 260 MTRQQMLEEDLTKKHS---------QQELEQMLDDFGGKVSE---QLDQHQKMQQRYEGM 307
Query: 357 EKQSHTHINEA---QMKLGKLERDEETH 381
EK+ T +E LGKL ++E H
Sbjct: 308 EKEVDTLRHEEIRLNSLLGKLSAEKEAH 335
>gi|209946172|gb|ACI97317.1| RAD50 [Drosophila melanogaster]
Length = 593
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 18/231 (7%)
Query: 113 VCVVRSLLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLI 165
V + + +S K K + T D+TI+ F TG Q +L + + + + +
Sbjct: 31 VSIXXXMKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFM 87
Query: 166 GVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP 225
GVSKAI+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+
Sbjct: 88 GVSKAIINNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELK 147
Query: 226 EIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERN 285
+A+ + K+E + K + +K D + EE MKPI +LV++ RN
Sbjct: 148 IKEANIKHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RN 203
Query: 286 MSVMSTQYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLF 332
+ +YQ K E D ++C + L IK+ F G EL +++ F
Sbjct: 204 VEFEIGKYQAXKVEMDTKHKNCKDQISTLTLKIKKPFRGTLDELDQEISNF 254
Score = 41.6 bits (96), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 447 QAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVN 506
Q +I+ L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N++N
Sbjct: 369 QVKIDELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINQIN 428
Query: 507 SEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK 566
+ +K++D +K+ I E + + +D +++ L + +AE SLK ++
Sbjct: 429 ELYESATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKE 487
Query: 567 -ESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHL 625
+ K +++ ++ RH F LF N++ S+ + +I + E N ++
Sbjct: 488 LDKKNQEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKE 547
Query: 626 YTLEANVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDR 668
+ E N + D R EL D EL+ S P++D L+R
Sbjct: 548 QSYEIKRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLER 590
>gi|328701931|ref|XP_003241752.1| PREDICTED: hypothetical protein LOC100568495 [Acyrthosiphon pisum]
Length = 1766
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 72/111 (64%)
Query: 1319 LRSLLSSRLLSRNSKLTLYNTIIKPVLLYGSETWSVTKREEHQMQVFENKVYRTIFGPYF 1378
L +L S+ LS+ K+ +Y T++KP++LYGSETW++ K EE ++ +FE KV R IFGP +
Sbjct: 1337 LEKVLKSKALSKALKIKMYMTLLKPIVLYGSETWALRKTEESRLMIFERKVLRKIFGPIY 1396
Query: 1379 DHQTQSWKRRHNSDIHALSKQPNIVATMNTNRLRWLGHLMRIDKNRAVWKI 1429
D QT W++ HN+++ L ++PNIV + +L W GH R N W I
Sbjct: 1397 DRQTSEWRKLHNAELQRLFQRPNIVREITKRKLSWAGHAWRKQGNLVKWVI 1447
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 24/139 (17%)
Query: 1342 KPVLLYGSETWSVTKREEHQMQVFENKVYRTIFGPYFDHQTQSWKRRHNSDIHALSKQPN 1401
+ ++LYGSETW++ K EE ++ +FE KV R IFGP +D QT W++ HN ++ L ++PN
Sbjct: 1458 RSIVLYGSETWALRKTEESRLMIFERKVLRKIFGPIYDRQTSEWRKLHNVELQGLFQRPN 1517
Query: 1402 IVATMNTNRLRWLGHLMRIDKNRAVWKIFTNTPHQGKRLPGRPRSCWINEMKRLCNRW-- 1459
I G L++ W + P+ GKR GRP+ W + +K+ +
Sbjct: 1518 I------------GILVK-------W-VIEEEPN-GKRPLGRPKLRWEDGVKKEVEKIEP 1556
Query: 1460 GLNDWEELTQHRVLWRQAV 1478
G+ W E+ + R W+ V
Sbjct: 1557 GVK-WREVAEDRDRWQNLV 1574
>gi|300708743|ref|XP_002996545.1| hypothetical protein NCER_100357 [Nosema ceranae BRL01]
gi|239605855|gb|EEQ82874.1| hypothetical protein NCER_100357 [Nosema ceranae BRL01]
Length = 1147
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 27/228 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L +L I G+R++ +K + + FQ PLTLIVG+NG GKTT+IEC+K+ T P +
Sbjct: 1 MTFLHKLVIKGVRSYNPNKAQTIDFQHPLTLIVGQNGTGKTTLIECLKYITTGTLPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSG---KNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVR 117
G F++D + E A NF +D I + +K + T + ++
Sbjct: 61 GGA-FIYDGGLANNTEVKAEIKLYLHNF-YDKEIVIQKIIQTSIKQKKTEQK-----ILE 113
Query: 118 SLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIF 177
+ N N K+ F ++ + G + ++ ++ +++ ++ +IL N+IF
Sbjct: 114 FNVWVNNNPKEIID----------FDNTLRSSCGKINKD---DLSSILEINTSILENIIF 160
Query: 178 CHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP 225
CHQE++ W L E +K+ FDEIF +T+Y+K LE++K + +KEI
Sbjct: 161 CHQEDTMWYLAEPATIKKKFDEIFSSTRYSKILENLK----KAKKEIA 204
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 32/209 (15%)
Query: 1109 KLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGT 1168
K+ E+ +D+ K L+ +I YH K+ IN ++E W+ Y+GNDIDYI + +
Sbjct: 966 KIIELSCNDIDKCITVLDKSIIDYHYNKIEEINLNLKELWSNCYKGNDIDYIKLIIN-EN 1024
Query: 1169 GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEF 1228
GS + Y+Y+++ KN IE DMRNR SAGQ+++ +++R+ +S V+T DE
Sbjct: 1025 GS---KNYSYKMMIVKNNIELDMRNRSSAGQKMIGNILLRMALSRVFCCNFNVLTLDEP- 1080
Query: 1229 IENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITH 1288
T +D+ V ++LA T ++ TN N QLI+ITH
Sbjct: 1081 ---TTNLDKENV-------ESLAYTL--------VNITKTN---------PNLQLIIITH 1113
Query: 1289 DEEFIENLTAIDRAYVVRIVRDHKGLSDI 1317
DE+F+ + ++ R+ R+ G S I
Sbjct: 1114 DEDFLSIMCRESLSFYYRLTRNVNGDSVI 1142
>gi|193208595|ref|NP_001122999.1| Protein RAD-50, isoform b [Caenorhabditis elegans]
gi|148472886|emb|CAN86608.1| Protein RAD-50, isoform b [Caenorhabditis elegans]
Length = 1312
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA +LHI GIR+ + + V + F P TLI G NG GKTT IE + F T + P
Sbjct: 15 MAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMP-- 72
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVV-R 117
+NF+H + +K AS F+ K E A+ +L T
Sbjct: 73 TQKKQNFIHSTDVARKTRVDASVTLEFID----VKGRECTAVRRLVVTSGTKAAALAEEH 128
Query: 118 SLLLSNKNGKDNCATRDTTISRKI--FATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+L + +G N T+S K+ F T + K+LG V +A+ V
Sbjct: 129 TLAIKYPDGTVN------TLSSKVCDFNTALLKHLG---------------VPRAVFKYV 167
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
IFCHQE+S+WPL E K++K+ FD+IF TK+ KA E +K
Sbjct: 168 IFCHQEDSTWPLSEPKELKKRFDDIFQLTKFVKAQERMK 206
>gi|68062825|ref|XP_673421.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491259|emb|CAI02389.1| hypothetical protein PB300714.00.0 [Plasmodium berghei]
Length = 197
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 105/224 (46%), Gaps = 38/224 (16%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M LD++ I GIR++ + ++ + F P+T+I G NG GK+TIIEC+K T ++P
Sbjct: 1 MTTLDKIGIQGIRSYCDEYSQQLEFSSPITIIYGNNGSGKSTIIECLKVNCTGDFP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+A GK+F+HDP I K + L NN + + RS
Sbjct: 57 ----------------PNAEKGKSFIHDPLISNKMNVRGKIDLLLKNYNNKKIGISRSFS 100
Query: 121 LSNKNGKDN-----CATRDTTISRK------IFATGVQKNLGCLQQESVLEMCNLIGVSK 169
L K N + D I K I T ++ C + L+GVSK
Sbjct: 101 LYYSKDKQNRIKHTFRSLDNNIIIKKDKGDDIIITNKCVDINC-------HIPKLMGVSK 153
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
A+L NVI CH + S WP E K+K+ FDE+F ++K LE +
Sbjct: 154 ALLENVILCHHDESLWPFSESTKIKKKFDELFGDDNFSKILEEL 197
>gi|269860026|ref|XP_002649736.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348]
gi|220066795|gb|EED44266.1| DNA repair protein RAD50 [Enterocytozoon bieneusi H348]
Length = 1180
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 36/279 (12%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L L I GIR+F K+ + F PLTLIVG+NG GKTTIIEC+K+ T E P +
Sbjct: 1 MIRLISLDIKGIRSFDPHKSNRIEFDVPLTLIVGQNGTGKTTIIECLKYLTTGELPPNSK 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDET-HAIVKLQCTCENNDTVCVVRSL 119
G FV D ++ + + + +F ++ I + + H+ KL+ E C
Sbjct: 61 QGV-FVFDAKLINELDVKSELVLHFSNNTDIYQVNRILHSTYKLK-KIEQKQIECSFNQY 118
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
KNG +S KI + V K L + +S +IL N+IFCH
Sbjct: 119 ----KNG------NKLLLSNKI--SDVDK-LVPIYLDSF----------PSILENIIFCH 155
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKK 239
QE +WP+ + +K DEIF TKYNK L+ +KI + L + + ++K H A L K
Sbjct: 156 QEEMAWPVGDPVILKRKIDEIFGNTKYNKTLQQLKITKKELEQSV-KLKTHDLAYLYKNK 214
Query: 240 EADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQ 278
S + I +N + H I + M I+E L++
Sbjct: 215 STKSNIEKIIDNLK---------HEITKKMCKIDEILIE 244
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 44/195 (22%)
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
+++ + +++Y +LKL E+ I D+ K LE V++YHS K+ IN +++E W+
Sbjct: 978 LKAYSDALKQYNEAAIELKLLELSIEDINKSVMALEKTVLEYHSNKIEEINDILKELWSE 1037
Query: 1151 IYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKK----NGIEQDMRNRCSAGQRVLACLI 1206
Y G DI+ I + +D+ + + YNY+++ K N E +MR RCSAGQ+++A ++
Sbjct: 1038 TYNGKDIERIELKSDLTSTN-----YNYKLIMYKLNNNNISELEMRGRCSAGQKMIASIL 1092
Query: 1207 IRLFISD-----------------------------------QKNFQLIVITHDEEFIEN 1231
R+ + + +KN QLI+ITHDEEF+
Sbjct: 1093 FRIALMEVFSNINVLALDEPTTNLDKANIECLAKTLNNLLLRKKNMQLIIITHDEEFVSM 1152
Query: 1232 LTAIDRAYVVRIVRD 1246
L I I RD
Sbjct: 1153 LNTIGCDVYYTIERD 1167
>gi|387596186|gb|EIJ93808.1| hypothetical protein NEPG_01380 [Nematocida parisii ERTm1]
Length = 1278
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 34/204 (16%)
Query: 1115 ISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGSEKRR 1174
ISDL KY ++ +++YHS+K+ +N +I+E W Y+G DID I I + +
Sbjct: 1100 ISDLEKYIKGVQAAIVRYHSEKLAEVNAIIKEIWGLAYKGTDIDEIKIVSHLDK------ 1153
Query: 1175 TYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTA 1234
+Y +V KNGIE DMR R SAGQ+VLA ++IRL +++ + ++ D E T
Sbjct: 1154 --SYSLVMVKNGIEIDMRGRVSAGQKVLASIVIRLALAEAFSLNCGFLSLD----EPTTN 1207
Query: 1235 IDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIE 1294
+D A + LA+ S I+ + FQL+VITHDE+F+
Sbjct: 1208 LDSANI-------SGLAKALSS--------------IIQARKAEGGFQLLVITHDEDFVR 1246
Query: 1295 NLTAID-RAYVVRIVRDHKGLSDI 1317
L A + Y R+ RD G+ I
Sbjct: 1247 ELLATECTEYFYRLERDIVGVPKI 1270
>gi|17563838|ref|NP_506070.1| Protein RAD-50, isoform a [Caenorhabditis elegans]
gi|68062283|sp|O44199.1|RAD50_CAEEL RecName: Full=DNA repair protein rad-50
gi|2687855|emb|CAA99730.1| RAD50 homologue ceRAD50 [Caenorhabditis elegans]
gi|4008379|emb|CAB01581.1| Protein RAD-50, isoform a [Caenorhabditis elegans]
Length = 1298
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA +LHI GIR+ + + V + F P TLI G NG GKTT IE + F T + P
Sbjct: 1 MAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMP-- 58
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVV-R 117
+NF+H + +K AS F+ K E A+ +L T
Sbjct: 59 TQKKQNFIHSTDVARKTRVDASVTLEFID----VKGRECTAVRRLVVTSGTKAAALAEEH 114
Query: 118 SLLLSNKNGKDNCATRDTTISRKI--FATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+L + +G N T+S K+ F T + K+LG V +A+ V
Sbjct: 115 TLAIKYPDGTVN------TLSSKVCDFNTALLKHLG---------------VPRAVFKYV 153
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
IFCHQE+S+WPL E K++K+ FD+IF TK+ KA E +K
Sbjct: 154 IFCHQEDSTWPLSEPKELKKRFDDIFQLTKFVKAQERMK 192
>gi|440492134|gb|ELQ74728.1| DNA repair protein RAD50, ABC-type ATPase/SMC superfamily
[Trachipleistophora hominis]
Length = 337
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 46/304 (15%)
Query: 3 LLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSG 62
+L++L I GIR++ + V++F P+TLI+GENG GKTTIIE +++A+T + P S G
Sbjct: 2 ILNKLMIKGIRSYSPSTSNVIQF-FPMTLILGENGTGKTTIIEALRYAITGDLPP-MSRG 59
Query: 63 KNFVHDPRIGKKDEASASSGKNFVHDPRIGKK-DETHAIVKL-QCTCENNDTVCVVRSLL 120
FV+DP + + +A + + TH K+ Q EN +V V S+
Sbjct: 60 GAFVYDPTLSNSTDTNAQIKLKLCDRYVVSRSLSLTHRKSKIEQKNTENVFSVIVNDSVS 119
Query: 121 LSNKNGKDNCA--------------------TRDTTISRKIFATGVQKNLGCLQQESVLE 160
S N +N T++T RK+ K+L + +
Sbjct: 120 ESYGNNMENLCNNDEVGNVLGWKKEEETNDRTKNTETKRKM------KSLSGKAADIDKQ 173
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK-IQRDR 219
M ++ +K +L++VIFCHQE S+WPL E K+ D+IF +T Y KA+E++K +++D+
Sbjct: 174 MLMVLNTNKPLLDHVIFCHQEESTWPLSEPANFKKRMDDIFCSTVYIKAVENLKNVRKDK 233
Query: 220 ---LRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEE----LHNIEESMKPI 272
L+ ++ E LN+ +A K + + ++ ++ F + N++ ++ +
Sbjct: 234 NVQLKMKLQE--------LNFALQAKKKHKELLARLERANEDFMNNSGVISNLQSKLQVL 285
Query: 273 NEKL 276
NEKL
Sbjct: 286 NEKL 289
>gi|402467932|gb|EJW03151.1| hypothetical protein EDEG_02456 [Edhazardia aedis USNM 41457]
Length = 1457
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 59/234 (25%)
Query: 1101 YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
Y+ +L+ +++ SD K +E + +YH + M +N +++ W YQGNDIDYI
Sbjct: 1268 YYKAYLELETLKLIKSDTLKCLQEIEKRIKEYHEEMMLEVNSKLKDLWVNTYQGNDIDYI 1327
Query: 1161 SIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLI 1220
I D+ +T NY +V KN + DM+ R SAGQ++LAC+++R+
Sbjct: 1328 QIDTDIN-----EKTLNYTLVLVKNNTKLDMKGRSSAGQKMLACILVRI----------- 1371
Query: 1221 VITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLD--------- 1271
AL + FS + + ALDEPTTNLD
Sbjct: 1372 ----------------------------ALCDVFSNDFRVLALDEPTTNLDNNNVEALAI 1403
Query: 1272 -IKNASDQKNFQLIVITHDEEFIENLTAIDRA--YVVRIVRDHKGLSDIHLRSL 1322
I N + N Q ++ITHD F + ID + V ++RD G S I +S+
Sbjct: 1404 TINNVIKKCNLQFVLITHDFRFAK---MIDNSEETVYHVIRDENGDSCIFKKSI 1454
>gi|70946900|ref|XP_743118.1| DNA repair protein RAD50 [Plasmodium chabaudi chabaudi]
gi|56522461|emb|CAH80533.1| DNA repair protein RAD50, putative [Plasmodium chabaudi chabaudi]
Length = 346
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 71/369 (19%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M LD++ I GIR++ + + + F P+T+I G NG GK+TIIEC+K T ++P
Sbjct: 1 MTTLDKIGIQGIRSYCDEYAQQLEFSSPITIIYGNNGSGKSTIIECLKVNCTGDFP---- 56
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
+A GK+F+HDP I K + L NN + + RS
Sbjct: 57 ----------------PNAEKGKSFIHDPLISNKMNVRGKIDLLLKNYNNKKIGISRSFS 100
Query: 121 LSNKNGKDN-----CATRDTTISRK------IFATGVQKNLGCLQQESVLEMCNLIGVSK 169
L K N + D I K I T ++ C + L+GVSK
Sbjct: 101 LYYSKDKQNRIKHTFRSLDNNIIIKKDKGDDIIITNKCVDINC-------HIPKLMGVSK 153
Query: 170 AILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKA 229
A+L NVI CH + S W E K+K+ FDE+F ++K LE + + +K++ E+
Sbjct: 154 ALLENVILCHHDESLW-FSESTKIKKKFDELFGDDNFSKILEELV----KCKKKMNEVLK 208
Query: 230 HYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKE--RNMS 287
L K++ KK+ I+ +K E NEK+ EKE + +
Sbjct: 209 KKNYELINIKDSYEKKKNIFLEIEKNQAEIE------------NEKIFIQQEKEELKKKT 256
Query: 288 VMSTQYQTK-----KTERDMI--------QESCNELESSIKQLFSGDKAELQSKLNLFKI 334
V+ Q++ K K D+ +S E +K+++ +EL+ +LFK
Sbjct: 257 VLLDQFKNKNNILYKISSDIDTYFVLYERHQSDIEQYKDMKEIYEESSSELEKFSDLFKT 316
Query: 335 NLDEKCSEL 343
+L KC+EL
Sbjct: 317 DL-AKCNEL 324
>gi|396081692|gb|AFN83307.1| Rad50-like DNA repair protein [Encephalitozoon romaleae SJ-2008]
Length = 1249
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 144/288 (50%), Gaps = 42/288 (14%)
Query: 1035 QSLEEIDLKNNLTLLEKKEAVAKLNEELKLS-----EIMISDLTKYHHTLENCVIKYHSQ 1089
+ L E D + TL EKK +L EE K++ +++ + + +++C K Q
Sbjct: 980 KELSETDFEYLATLKEKK----RLLEEKKMNLISQKSLLLGECKQIALGIKSC--KQELQ 1033
Query: 1090 KMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWT 1149
K S R + +Y +LK E+ DL K L+ +I +H+ K+ IN +++ W
Sbjct: 1034 KDHS--RTVEKYNKCFIELKALEMACLDLDKCIQALDKAIIDFHTSKLEEINATLKDLWE 1091
Query: 1150 RIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRL 1209
Y+G+D+D+I I T S ++TY+Y+VV K G+E +MR R SAGQ+++A ++IRL
Sbjct: 1092 HTYRGDDVDWIEIK----TESLGQKTYSYKVVFIKGGVELEMRGRSSAGQKMIASILIRL 1147
Query: 1210 FISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTN 1269
+S+ ++ D E T +DR + ++LA T SR
Sbjct: 1148 ALSNSFASNCNILALD----EPTTNLDRDNI-------ESLAFTLSRV------------ 1184
Query: 1270 LDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDI 1317
I + FQLIVITHDE+F++ L+ + R+ R+ G S I
Sbjct: 1185 --ISRHKENSGFQLIVITHDEDFVQLLSRDGPEHFYRLNRNEDGDSVI 1230
>gi|349805793|gb|AEQ18369.1| putative rad50 protein [Hymenochirus curtipes]
Length = 301
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Query: 86 VHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCATRDTTISRKIFATG 145
VHDP++ + + A ++LQ N + V V RS+L + K + + I+R
Sbjct: 1 VHDPKVAHETDVRAQIRLQLKDVNGERVAVHRSMLCTQKGKSMEFKSLEGVITRVKHGEK 60
Query: 146 VQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATK 205
V + C + + EM + +GVS A+LNN IFCHQE+S+WPL EG+++K + DEIF AT+
Sbjct: 61 VSLSTKCAEMDK--EMISALGVSAAVLNNAIFCHQEDSNWPLSEGRQLK-VKDEIFSATR 117
Query: 206 YNKALESIKIQR-----DRLRKE 223
Y KALE+++ R DR+ KE
Sbjct: 118 YIKALETLRQVRHQREMDRVNKE 140
>gi|84784049|gb|ABC61989.1| Rad50-like protein [Trichomonas vaginalis]
Length = 1216
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 81/163 (49%), Gaps = 45/163 (27%)
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+E+ I DLTK+ L N + +YH +K+ IN L++ +W + YQ DI+ ISI A T +
Sbjct: 1095 TEMTIKDLTKFAEQLNNSIXEYHQRKVLEINELLKAFWEKSYQSMDIENISIVAHSSTEN 1154
Query: 1171 EK----RRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLIVITHDE 1226
+ R +Y+Y+VV K+G E +M RCS GQ+VLA LIIR+
Sbjct: 1155 NESKSGRISYDYKVVMFKSGQEVEMSGRCSEGQKVLASLIIRM----------------- 1197
Query: 1227 EFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTN 1269
ALA+ F C I ALDEPTTN
Sbjct: 1198 ----------------------ALAKAFG--CSILALDEPTTN 1216
>gi|440492136|gb|ELQ74730.1| DNA repair protein RAD50, ABC-type ATPase/SMC superfamily, partial
[Trachipleistophora hominis]
Length = 499
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 37/223 (16%)
Query: 1102 WTRIY-QLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYI 1160
++ IY K+ ++++ DL K +E V+KY+ K+ +NR ++ W+ Y+GNDID I
Sbjct: 311 YSEIYTHTKILDVVLKDLDKSIKAIEKSVLKYYENKIEELNRNLKYLWSNTYKGNDIDKI 370
Query: 1161 SIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNFQLI 1220
+ A++ Y+Y+++ KN +E +MR RCSAGQ+V+A LI RL +S +
Sbjct: 371 ELKAEITNSK-----YSYKLMMYKNDVELEMRGRCSAGQKVIASLIFRLALSITFSGNCN 425
Query: 1221 VITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASDQKN 1280
V+T DE T +D+ + + R K L E +NL
Sbjct: 426 VLTLDEP----TTNLDQCNIESLARTLKYL--------------ERMSNL---------- 457
Query: 1281 FQLIVITHDEEFIENLTAIDRA-YVVRIVRDHKGLSDIHLRSL 1322
QL++ITHDEEF+ NL + D Y ++ R+ S I S+
Sbjct: 458 -QLVIITHDEEFL-NLVSKDSVEYFYKVRRNSSCESVIERHSV 498
>gi|344246901|gb|EGW03005.1| DNA repair protein RAD50 [Cricetulus griseus]
Length = 376
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 96/165 (58%)
Query: 161 MCNLIGVSKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRL 220
M + +GVSKA+LNNVIFCHQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R
Sbjct: 1 MISCLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQ 60
Query: 221 RKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLT 280
+++ E + + K++A + I + + S E + + E ++P+ +L ++
Sbjct: 61 GQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLASSQEIVKSYENELEPLKNRLKEIE 120
Query: 281 EKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAEL 325
+ + + + + + +++ +ELE ++++F G +L
Sbjct: 121 HNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGTDEQL 165
>gi|406694678|gb|EKC98002.1| hypothetical protein A1Q2_07799 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1137
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 92/204 (45%), Gaps = 57/204 (27%)
Query: 2 ALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASS 61
A L++L I GIR+F +V+ F PLT+IVG NG GKT + NE
Sbjct: 25 AALNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKT---------MANEK------ 69
Query: 62 GKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL-L 120
E A V+L+ N + V RSL +
Sbjct: 70 ----------------------------------EVKAQVRLRFWNVNRQRMTVTRSLQV 95
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+ K G T + +++ G C + + E+ L+GVSKAIL NVIFCHQ
Sbjct: 96 TTKKTGGLTMKTLEGLLAKTDGNDG-----KCSEMDE--EVPLLLGVSKAILENVIFCHQ 148
Query: 181 ENSSWPLDEGKKVKEIFDEIFDAT 204
E+S+WPL E +K+ FD+IF+AT
Sbjct: 149 EDSNWPLSEPAALKKKFDDIFEAT 172
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 54/129 (41%)
Query: 1197 AGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSR 1256
AGQ+VLA +IIRL ALAE+F +
Sbjct: 1034 AGQKVLASIIIRL---------------------------------------ALAESFGQ 1054
Query: 1257 NCGIFALDEPTTNLD--------------IKNASDQKNFQLIVITHDEEFIENLTAID-R 1301
CG+ ALDEPTTNLD I+ Q NFQLIVITHDE F++ L A D
Sbjct: 1055 GCGVLALDEPTTNLDQENINALAESLAEIIRERRRQANFQLIVITHDEGFLQRLAAHDVL 1114
Query: 1302 AYVVRIVRD 1310
Y R+ RD
Sbjct: 1115 EYYWRVSRD 1123
>gi|123444611|ref|XP_001311074.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121892870|gb|EAX98144.1| hypothetical protein TVAG_332540 [Trichomonas vaginalis G3]
Length = 755
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 1 MALLDQLHIMGIRNF---PADKN-RVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYP 56
M+ L L + GIR F P D++ + + +TLI G NG GKTTI E I++AL
Sbjct: 1 MSKLLSLTVKGIRLFNPDPKDESTQTIDLDDKMTLITGPNGSGKTTIFEAIQYAL----- 55
Query: 57 QGASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVV 116
IG E S G +D ++ K++ A +L+ +N +V
Sbjct: 56 --------------IGVSQENSGGIG--LFYDRKVLGKEQYTAECRLKFRGVDNHIYQIV 99
Query: 117 RSLLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVI 176
R +++ ++ D + I++T E ++ L G SK+I+ NVI
Sbjct: 100 RKRNITDDLNREISQILDEQ-GKIIYSTKA---------EIDFQIPRLFGSSKSIIKNVI 149
Query: 177 FCHQENSSWPLD-EGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
FC Q +WP++ G K+KE FD+IF YNKA + I L+ +I E+K
Sbjct: 150 FCKQFEQTWPIEMAGSKLKERFDKIFGIEAYNKAHDEI---YKALKSKISELKEENNVYP 206
Query: 236 NYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKE 283
KK D KK + T D+ + E+ I+E M+ I ++ + EK+
Sbjct: 207 LIKKSFDKKKIIEQRIT---DEQY-EISRIKEQMEQIAAEIAEKNEKQ 250
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 236/473 (49%), Gaps = 45/473 (9%)
Query: 445 TKQAEINALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNR 504
T+ ++N LI +K E ++K +QIE KK+ V +NE+ + +Q++ +L
Sbjct: 251 TRYNDLNNLISQK---EGELKGIIEQIENYKKENCEVTKTLNELGNEE--VQII-DELES 304
Query: 505 VNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKN 564
+ +ID SK+++ ++ KNEIE ++ E+ + ++++ SI I E K KN
Sbjct: 305 I--KIDINSKNIEINKFKNEIEQLDGEKKEI---IKKLESQRSI--NNQINDNEQKISKN 357
Query: 565 RKESKLADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKH 624
+KE K + IN +KE L+ + I EENF + + S+ + N I+ + + ++
Sbjct: 358 KKEIK-SKINEIKE-------LIHEEIDEENFSKIIKEKQKSLNNEENSIRVETDKEKTK 409
Query: 625 LYTLEANVSNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMT 684
+ + + K+L ++ +T ++ + LGS FE+E + E + Q+ +S+ T
Sbjct: 410 YEKSQIELDSKEKSLENKNKTKNDIESDLIENLGSTDFENEYKKYKNEQENLQKLISLDT 469
Query: 685 STQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLV-NKLKTKIKEIPEQTNNKKTHID 743
+Q ++ ++ + +CPLC R F+ + + N+L+ +K++P + + + +
Sbjct: 470 KSQSIYEEFVSESRSESCQCPLCKRKFKDNSERDEFIKNELEKVLKDLPSKIASNEEKLR 529
Query: 744 QLCKQQRSLQELKP-------VYENIMKLQDTDIPSLRSKL---IELEENVIETKGELKK 793
++ ++ S++ L+ V E+I KL++ +I +L+SK E + + + E++
Sbjct: 530 KVSEKIESIENLRDKHFIYQQVLEDIPKLEE-EIDTLKSKRDQNFEEYQQIKQNYDEIRS 588
Query: 794 LKTALETPKTKEKTALS-LQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQV 852
K E + K ++ L D + ++NI+ L + + ES + + + GV D++
Sbjct: 589 KKEKFEHEVIQLKNSIDLLNNDCSSYEENIKRLQSNLSDSIYIESLENSLNNIGVQQDKL 648
Query: 853 ----------LAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIH 895
+ ++ +K+ L +SKI+ + LN+ EKL + + +++H
Sbjct: 649 KSNIENYQKEIDEKSKKQISLYNMKSKIDRVKVYLNNK-EKLNQVTHEIDELH 700
>gi|26352888|dbj|BAC40074.1| unnamed protein product [Mus musculus]
Length = 301
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 458 VELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLD 517
+EL+++I + KQ +L +V +++ ++ S + L +L + E+ + K+
Sbjct: 1 IELKTEILTKKQS------ELRHVRSELQQLEGSSDRVLELDQELTKAERELSKAEKNSS 54
Query: 518 PDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLK 577
+ LK E+ + ++ +L+ L +D E+ L T +++ L K K I +K
Sbjct: 55 IETLKAEVMSLQNEKADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIK 114
Query: 578 ERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSK 637
RH L P K L+ L S + +IN+ ++ + K L + E N ++ +
Sbjct: 115 SRHSDELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINN 171
Query: 638 TLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL 697
L+ ++ L+ D++ V GS+ E +L R+ E+++ ++ +M+ +++ +I +L
Sbjct: 172 ELKKKEEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQL 231
Query: 698 -EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELK 756
+EN+ CP+C R F+++ + +++ L++K++ P++ + ++ + + +++ + L
Sbjct: 232 TDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESALKKKERRRDEMLGLV 291
Query: 757 PVYENIMKLQ 766
PV ++I+ L+
Sbjct: 292 PVRQSIIDLK 301
>gi|336122538|ref|YP_004577313.1| DNA double-strand break repair rad50 ATPase [Methanothermococcus
okinawensis IH1]
gi|334857059|gb|AEH07535.1| DNA double-strand break repair rad50 ATPase [Methanothermococcus
okinawensis IH1]
Length = 997
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 10 MGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNF 65
+ IRNF + KN + F + +T I+G NG GK++I E + +AL Y +G+ S N
Sbjct: 6 INIRNFRSHKNTQISFDKGITTIIGHNGSGKSSIFEAMNYAL---YARGSVSNVNI 58
>gi|333986794|ref|YP_004519401.1| DNA double-strand break repair rad50 ATPase [Methanobacterium sp.
SWAN-1]
gi|333824938|gb|AEG17600.1| DNA double-strand break repair rad50 ATPase [Methanobacterium sp.
SWAN-1]
Length = 900
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 26/267 (9%)
Query: 716 SVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRS 775
S V ++++KI + ++ +N KTH L ++ ++EL+ V + + T P R
Sbjct: 415 STEAKVEEIRSKINGVQQEISNLKTHNKNL---EKPVKELENVKDKCPVCKSTISPDKRD 471
Query: 776 KLIEL--------EENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT 827
+LIE ++ + + ELK LK+ +K ++ D+ L + I+ L
Sbjct: 472 ELIEGYDCEIKSNKDRIFQLDHELKGLKSQKHVLTSKFAEIQNINVDI--LKERIKTLEQ 529
Query: 828 LQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIES------GQTRLNSHN 881
Q+ELE S + G+ L+++ + KEKK N + K ES L +N
Sbjct: 530 SQKELESISSDLEGLEPKVSKLNEIDSLLKEKKTNQNEIKGKYESYISVKGSLESLGDYN 589
Query: 882 EKLQSLQKQKNDIHS-----KQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKV 936
K + L+K + +I S QLT + G LK+LE + ELE + S Y E+ +K
Sbjct: 590 SKNEDLKKIQTEIMSLNVNVHQLTEKSGTN-LKNLESKILELENLKSEYNHLSGEISQKN 648
Query: 937 APIETQLNLAQSELDALKKEHKKKLNE 963
+ IE +L+L ++ +K+E K NE
Sbjct: 649 SLIE-KLDLLDKDITGIKEETVKLDNE 674
Score = 47.0 bits (110), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 10 MGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDP 69
+ ++NF + ++ + F +++I+GENG GK++I+E + FAL ++ SGK
Sbjct: 6 LTMKNFKSHRDTHIDFSTGISVIMGENGAGKSSILEAVSFALFKQH-----SGKKIEQLI 60
Query: 70 RIGKK 74
+IG+K
Sbjct: 61 KIGQK 65
>gi|14521425|ref|NP_126901.1| chromosome segregation protein [Pyrococcus abyssi GE5]
gi|18203527|sp|Q9UZC8.1|RAD50_PYRAB RecName: Full=DNA double-strand break repair Rad50 ATPase
gi|5458643|emb|CAB50131.1| Rad50 purine ntpase [Pyrococcus abyssi GE5]
gi|380742022|tpe|CCE70656.1| TPA: chromosome segregation protein [Pyrococcus abyssi GE5]
Length = 880
Score = 48.1 bits (113), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 233/565 (41%), Gaps = 143/565 (25%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+ NF + + VVRF++ + LI+G+NG GK+++++ I L Y +
Sbjct: 8 VYNFRSHEETVVRFRKGINLIIGQNGSGKSSLLDAILVGL---YWSKKLRLRGL------ 58
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
KKDE RIG K T +++ EN+D+ V+
Sbjct: 59 -KKDEFR-----------RIGGKGGT----RIEIKFENDDSKYVL--------------- 87
Query: 132 TRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILN-----NVIFCHQENSSWP 186
RD SR + VQ+N G + S M ++ + IL N I+ Q
Sbjct: 88 FRD--FSRNVAYLKVQEN-GKWRHASEPSMESVSSYIERILPYNVFLNAIYIRQGQIDAI 144
Query: 187 LDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQ 246
L+ + ++ EI + K A E++K IK + + +SKK
Sbjct: 145 LESDETRDKVVREILNLDKLESAYENLK-----------RIKTNINLLI------ESKKS 187
Query: 247 LIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQES 306
I NIEE +K NE +LT+K ++ +S++ + E + ++E+
Sbjct: 188 FIART-----------ENIEELIKA-NED--ELTKKLSEINEISSKLPPIRGELEKVREN 233
Query: 307 CNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINE 366
ELE SIK S K +++ KL K L+EK ++E + I+E+K + + E
Sbjct: 234 VKELE-SIKGKISELKIQVE-KLKGRKKGLEEKIVQIE-------RSIEEKKAKISELEE 284
Query: 367 AQMKLGKLERDEETHKKLN---DTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT 423
+ KL+ E+ ++KL D ++KL L L
Sbjct: 285 IVKDIPKLQEKEKEYRKLKGFRDEYESKLRRLEKELS----------------------- 321
Query: 424 TIDKYLSDIKILERTFSDNENTKQ-AEINALIVEKVELESKIKSFKQQIEGNKKDLTNVI 482
K+ S++K +E + E K+ AE E+ K+ ++++E +L +
Sbjct: 322 ---KWESELKAIEEVIKEGEKKKERAE---------EIREKLSEIEKRLE----ELKPYV 365
Query: 483 TQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVI 542
++ + Q Q ++ L+ +L K L P ++ ++E+ ++R E+E+ + I
Sbjct: 366 EELEDAKQVQKQIERLKARL-----------KGLSPGEVIEKLESLEKERTEIEEAIKEI 414
Query: 543 DAEISIL-QAQNITLAEIKSLKNRK 566
I + Q +N + I+ L+ K
Sbjct: 415 TTRIGQMEQEKNERMKAIEELRKAK 439
>gi|374339075|ref|YP_005095811.1| DNA repair ATPase [Marinitoga piezophila KA3]
gi|372100609|gb|AEX84513.1| ATPase involved in DNA repair [Marinitoga piezophila KA3]
Length = 932
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 141/307 (45%), Gaps = 41/307 (13%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
++N+ + ++V F+ + L++G+NG GK++I E + A+ + P+ S KN V+
Sbjct: 8 LKNYRNHREKIVEFREGINLLLGKNGTGKSSIFEALGIAMFDIEPRDKSL-KNAVN---- 62
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
K +A+ F+ + D+ IV+ + ++ ++L KNG
Sbjct: 63 --KGAKTATITVEFIGN------DDNEYIVERKIGGQS--------KVILKEKNGTVLSE 106
Query: 132 TRDTTISRKIFATGVQKNLGCLQQESVLEMC-NLIGVSKAILNNVIFCHQENSSWPLDEG 190
+D I RKI GV L ++ +++ E+ N+I ++ N++I E S
Sbjct: 107 RKDDVI-RKI---GV---LAGIKGKNIKEIFRNVISANQ---NDIIGVFNETPSSR---- 152
Query: 191 KKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYN 250
KE+F++IFD Y + +++ + ++I ++ + L + E + K L
Sbjct: 153 ---KELFNKIFDTEVYEQLYSILQLSEKKYNEQILSFESKVE-ILEKQIEEYAGKDLELE 208
Query: 251 NTQKRDQSFE-ELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNE 309
+K ++ E EL ++E +EK L EK + + + K + +++QE +
Sbjct: 209 KVKKEIENLENELSKLKEKAARYDEKKKSLEEKINRLKEYEHKLDSLKLKEEVLQEKILK 268
Query: 310 LESSIKQ 316
LE I Q
Sbjct: 269 LEKDIDQ 275
>gi|418576383|ref|ZP_13140529.1| chromosome segregation SMC protein [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325445|gb|EHY92577.1| chromosome segregation SMC protein [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 1189
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 36/145 (24%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L + G ++F N V+F +T IVG NG GK+ I + IK+ L G
Sbjct: 1 MVYLKSIDAFGFKSFAEHTN--VQFDEGVTAIVGPNGSGKSNITDAIKWVL------GEQ 52
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S K+ G K E SG +K + +A VKL+
Sbjct: 53 SAKSLR-----GAKMEDIIFSGAEH-------RKAQNYAEVKLK---------------- 84
Query: 121 LSNKNGKDNCATRDTTISRKIFATG 145
L N +GK + + T++R+++ +G
Sbjct: 85 LENSSGKLQVDSTEVTVTRRLYRSG 109
>gi|45358904|ref|NP_988461.1| SMC domain-containing protein [Methanococcus maripaludis S2]
gi|49036441|sp|P62134.1|RAD50_METMP RecName: Full=DNA double-strand break repair Rad50 ATPase
gi|45047770|emb|CAF30897.1| DNA double-strand break repair rad50 ATPase [Methanococcus
maripaludis S2]
Length = 993
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 55/227 (24%)
Query: 10 MGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDP 69
+ + NF + +N + F + +T I+G+NG GK++I + + FAL A G NF
Sbjct: 6 IKMENFRSHRNTSINFSKGITSIIGQNGSGKSSIFQAMNFALF------APRGNNF---- 55
Query: 70 RIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDN 129
RI + A+S F + T+ + + + + +D + V NGK N
Sbjct: 56 RIENLMQQGAAS---FSVELEFEMMGNTYLVKRKRFQHKTDDKLYV---------NGKLN 103
Query: 130 CATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ-ENSSWPLD 188
A + I++KI E +LE+ N ++ +N I+ Q E ++
Sbjct: 104 -AESASEINKKI--------------EEILEIDN------SVFSNAIYIKQGEIANLIQM 142
Query: 189 EGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
+ KE+ ++ KY KA E + I +K Y+ TL
Sbjct: 143 TPRDRKEVIGKLLGIEKYEKASEKMNI-----------VKKSYEETL 178
>gi|333910220|ref|YP_004483953.1| DNA double-strand break repair rad50 ATPase [Methanotorris igneus
Kol 5]
gi|333750809|gb|AEF95888.1| DNA double-strand break repair rad50 ATPase [Methanotorris igneus
Kol 5]
Length = 999
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 52/170 (30%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+RNF + N + F + +T+I+G NG GK++I + + +AL PR+
Sbjct: 8 MRNFKSHVNSEITFNKGITVIIGHNGSGKSSIFDAMHYAL---------------FKPRV 52
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCE-NNDTVCVVRSLLLSNKNGKDNC 130
G +D + GKKD + ++ T E T VVR
Sbjct: 53 GYEDLVTK------------GKKD-----LSVELTFEVGGKTYKVVRE------------ 83
Query: 131 ATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
+ +++A G K + +E E+ N++G+ + + N I+ Q
Sbjct: 84 -----RGNERLYANG--KLIAKGSREVTKEIENILGIDEKVFTNSIYIKQ 126
>gi|433655083|ref|YP_007298791.1| chromosome segregation protein SMC [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293272|gb|AGB19094.1| chromosome segregation protein SMC [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 1183
Score = 44.3 bits (103), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 64/376 (17%)
Query: 3 LLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSG 62
L +L I+G ++F ADK V+ F++ +T IVG NG GK+ I + ++ L + +
Sbjct: 2 FLKRLEIIGFKSF-ADK-VVLNFEKGITAIVGPNGSGKSNISDAVRLVLGEQSIKSLRGN 59
Query: 63 K----NFVH-DPR-----------IGKKDEASASSGKNFVHDPRIGKKDETHAIV-KLQC 105
K FV D R + D V +I + E+ + K QC
Sbjct: 60 KLEDVIFVGTDKRKPLSFAEVNLTLDNSDHTLPLDFTEVVITRKIFRSGESEFYINKTQC 119
Query: 106 TCENNDTVCVVRSLLLSNKNGKDNCAT------RDTTISR-----KIF--ATGVQKNLGC 152
++ V L + G+D + + +SR +IF A+G+ K
Sbjct: 120 RLKD------VYELFMDTGIGRDGYSIIGQGKIDEILVSRPEDRRQIFEEASGISK--YK 171
Query: 153 LQQESVLEMCNLIGVSKAILN-NVIFCHQENSSWPLDEGKKVKEIFDEI----------- 200
++E L+ LI ++ I N I C +N PL E K+ E++ ++
Sbjct: 172 YKKEEALK--KLIATNENINRINDILCEIQNQLEPLYEQKEKAEMYTKLQEEKKRVDITI 229
Query: 201 --FDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQS 258
FD + K L ++K ++D + KEI + ++ + + K D+++ I N ++ D +
Sbjct: 230 HYFDVEELFKKLNNLKEEQDIIEKEILKFQSEIE---DRNKTLDNEESEINNLKKELDIN 286
Query: 259 FEELHNIEESMKPINEKLVQLTEK----ERNMSVMSTQYQTKKTERDMIQESCNELESSI 314
E+ N ++ IN K+ L EK + N+ + KT+ + + +++ I
Sbjct: 287 KEDYFNSLNDIETINGKIDLLNEKIKNSQENIDRLKKSLDEGKTKSTTVLKDIENIKNDI 346
Query: 315 KQLFSGDKAELQSKLN 330
K+L S K EL++ LN
Sbjct: 347 KRLESR-KMELEANLN 361
>gi|3986196|dbj|BAA34955.1| myosin heavy chain [Dugesia japonica]
Length = 1743
Score = 44.3 bits (103), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 235/539 (43%), Gaps = 83/539 (15%)
Query: 520 QLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNR---KESKLADINLL 576
+LK E E + + +LE++ +++LQA+N ++++ ++ E K++ + L
Sbjct: 649 KLKEEFEKSEKYKKDLEEQ------NVTLLQAKNDLFLQLQTEQDSLADAEEKVSKLVLQ 702
Query: 577 KERHDRAFHLLFDMIPEE-NFKNSLDKALSSITFDINRIQEDINAKEKHLYTLE---ANV 632
K + L D + EE N +L++A + +I +++D+ + E L E A
Sbjct: 703 KADMEGRIKELEDQLSEEENSATTLEEAKKKLNGEIEELKKDVESLESSLQKAEQEKAAK 762
Query: 633 SNSSKTLRDQKRTLAELMDRMELVLGSKPFEDELDRVTLE-LKREQEEVSMMTSTQYLFN 691
KTL D R E + +M+ K DEL + T E L+ E+E+VS + +
Sbjct: 763 DQQIKTLNDNVREKEEQITKMQ---KEKKAADELQKKTEESLRAEEEKVSNLNKAKAKLE 819
Query: 692 SYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNN----KKTHIDQLCK 747
+ ++EEN +R + V K++ ++K+ E N+ K +QL +
Sbjct: 820 QAVDEMEEN------LSREQKVRADVEKAKRKVEGELKQNQEMLNDLERVKSELEEQLKR 873
Query: 748 QQRSLQELKPVYE---NIMKLQDTDIPSLRSKLIELEENV---IETKGELKKLKTALETP 801
++ L E N++ I L++++ ELEE++ + + + +K K LE
Sbjct: 874 KEMELNGANSKIEDENNLVATLQRKIKELQARIQELEEDLEAERQARAKAEKAKHQLEAE 933
Query: 802 KTKEKTALSLQGDLTLLDQNIR-----ELNTLQRELERQESKISGMRSTGVDLDQVLAQQ 856
+ L QG T ++ EL L+R+LE + +Q + Q
Sbjct: 934 IEEVTERLEEQGGATQAQTDLNKKREAELMKLKRDLE----------EANMQHEQAIMQT 983
Query: 857 KEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGG----AGMLKSLE 912
++K+ Q N ++L LQK K+ I ++ ++G +G L+SL
Sbjct: 984 RKKQ-------------QDTANEFADQLDQLQKSKSKIEREKNELRGDIEDLSGQLESLN 1030
Query: 913 DRKCELEGMDSVYQTELEELGRKVAPIETQLNLA----------QSELDALKKEHKKKLN 962
K LE + + + EL K+ + QL+ A SEL ++ + ++N
Sbjct: 1031 KAKINLEKSNKGLEATISELQNKLDELTKQLSDAGNSNNRNQHENSELHKSLEDAESQIN 1090
Query: 963 EEGAKIQDYTKQLEEVK-------RIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDI 1014
+ Q QLEE K R K + LN R L+ L A+RES+++ + K D+
Sbjct: 1091 QLSKAKQQLQAQLEEAKQNLEDESRAKSK-LNGDLRNALSDLDAMRESLEEEQEGKSDV 1148
>gi|304316937|ref|YP_003852082.1| chromosome segregation protein SMC [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778439|gb|ADL68998.1| chromosome segregation protein SMC [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 1183
Score = 43.9 bits (102), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 64/376 (17%)
Query: 3 LLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSG 62
L +L I+G ++F ADK V+ F++ +T IVG NG GK+ I + ++ L + +
Sbjct: 2 FLKRLEIIGFKSF-ADK-VVLNFEKGITAIVGPNGSGKSNISDAVRLVLGEQSIKSLRGN 59
Query: 63 K----NFVH-DPR-----------IGKKDEASASSGKNFVHDPRIGKKDETHAIV-KLQC 105
K FV D R + D V +I + E+ + K QC
Sbjct: 60 KLEDVIFVGTDKRKPLSFAEVNLTLDNSDHTLPLDFTEVVITRKIFRSGESEFYINKTQC 119
Query: 106 TCENNDTVCVVRSLLLSNKNGKDNCAT------RDTTISR-----KIF--ATGVQKNLGC 152
++ V L + G+D + + +SR +IF A+G+ K
Sbjct: 120 RLKD------VYELFMDTGIGRDGYSIIGQGKIDEILVSRPEDRRQIFEEASGISKY--K 171
Query: 153 LQQESVLEMCNLIGVSKAILN-NVIFCHQENSSWPLDEGKKVKEIFDEI----------- 200
++E L+ LI ++ I N I C +N PL E K+ E++ ++
Sbjct: 172 YKKEEALK--KLIATNENINRINDILCEIQNQLEPLYEQKEKAEMYTKLQEEKKRVDITI 229
Query: 201 --FDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQLIYNNTQKRDQS 258
FD + K L ++K ++D + KEI + ++ + + K D+++ I N ++ D +
Sbjct: 230 HYFDVEELFKKLNNLKEEQDIIEKEILKFQSEIE---DRNKTLDNEESEINNLKKELDIN 286
Query: 259 FEELHNIEESMKPINEKLVQLTEK----ERNMSVMSTQYQTKKTERDMIQESCNELESSI 314
E+ N ++ IN K+ L EK + N+ + KT+ + + +++ I
Sbjct: 287 KEDYFNSLNDIETINGKIDLLNEKIKNSQENIDRLKKSLDEGKTKSTTVLKDIENIKNDI 346
Query: 315 KQLFSGDKAELQSKLN 330
K+L S K EL++ LN
Sbjct: 347 KRLESR-KMELEANLN 361
>gi|383786616|ref|YP_005471185.1| putative S-layer protein [Fervidobacterium pennivorans DSM 9078]
gi|383109463|gb|AFG35066.1| putative S-layer protein [Fervidobacterium pennivorans DSM 9078]
Length = 970
Score = 43.9 bits (102), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 192/402 (47%), Gaps = 57/402 (14%)
Query: 706 LCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKL 765
L + F S + V ++ ++ ++P+Q+ Q+ ++S++ LK ++
Sbjct: 73 LYSLFDSSLREIDNKVTNIQARLSDMPQQS--------QISDVKQSVETLKKEQNDLKSN 124
Query: 766 QDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIREL 825
+DI LR+ L +L +++ + +LK +AL KT SL +DQ + +L
Sbjct: 125 FKSDIEELRTSLNKLSQDLKKVSEDLKSYVSAL------NKTNSSLNA----VDQKVDKL 174
Query: 826 N----TLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHN 881
+ +L+ LE SK S + S LD+ + +++N ++E+ LNS
Sbjct: 175 SATQESLKTSLEELNSKYSNLNSRLETLDKSSKALSDSISKINNTLKELEAT---LNSKL 231
Query: 882 EKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIET 941
++L+S + + LTV+ +K L++R LE + +T++E+L +KV I+
Sbjct: 232 KELESSLQVREPTSEDTLTVETE---IKELKERVSLLE----LLKTDVEKLSKKVIEIQN 284
Query: 942 QLNLAQSELDALKK----EHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTK--RGTLT 995
+ SEL LK+ + + NEE D +K L E+ I+ I N +K +
Sbjct: 285 SI----SELKTLKEKTIPQQPQPPNEE-----DISKILSEINIIQESIANLSKSDQDIQN 335
Query: 996 QLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAV 1055
Q+ +++ V +++ ED++ + ++ ++E ++ I S + T ++++E
Sbjct: 336 QVKLIKQRVDSVSKALEDLLGENQEIKKRLDEFSKEIQKLS--------DKTSVKQEETS 387
Query: 1056 AKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRL 1097
+L+ ELK SE +I +L LEN IK + ++ ++ +
Sbjct: 388 MQLSTELKYSETIIEELK--AKILENAEIKAFEESLKRLSSI 427
>gi|145351776|ref|XP_001420239.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580473|gb|ABO98532.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 3608
Score = 43.5 bits (101), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 160/802 (19%), Positives = 356/802 (44%), Gaps = 162/802 (20%)
Query: 327 SKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLND 386
+KLN LD+K ++ + L+S +++++ H++E + +LG E E + + D
Sbjct: 1211 AKLNTTLEELDKKSTDFAS---LESASVEQKRNFEKHVDELEKRLGASE--AEVQRLIQD 1265
Query: 387 ---TLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYL-SDIKILERTFSDN 442
++ K N + + +SQ+ I L S+ L +D
Sbjct: 1266 RDLAIEAKDNEMVSKI--------------------LSQSAIVSDLESERDALRSQLADL 1305
Query: 443 ENTKQAEINALIVEKVELESKIKSFKQQIE------------------GNKKDLTNVITQ 484
+ + +E+ ++ + +LES+++ ++ IE + +L V++Q
Sbjct: 1306 SSARDSELASV---RADLESQLREREEDIERVRSELDESKAALESERDALQSELERVLSQ 1362
Query: 485 INEVNQSQSTL-QVLQTKLNRVNSEIDQLSKSLDPD--QLKNEIEAWIRQ--------RN 533
+ EV+ SQS + L+++ + + S++ LS + D + ++ ++E+ +R+ R+
Sbjct: 1363 VPEVDASQSAIVSDLESERDALRSQLADLSSARDSELASVRADLESQLREREEDIERVRS 1422
Query: 534 ELEDELCVIDAEISILQAQ-NITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
EL++ +++E LQ++ L+++ + + + ++D L+ D L D+
Sbjct: 1423 ELDESKAALESERDALQSELERVLSQVPEVDASQSAAVSD---LESERDALRSQLADL-- 1477
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
++ D L+S+ D ++ + +E+ + + + + S L ++ L ++R
Sbjct: 1478 ----SSARDSELASVRAD---LESQLREREEDIERVRSELDESKAALESERDALQSELER 1530
Query: 653 MELVLGSKPFEDELD----RVTLELKREQEEV------------SMMTSTQYLFNSYIGK 696
VL P E+D + +L+ E++ + S + S + S + +
Sbjct: 1531 ---VLSQVP---EVDASQSAIVSDLESERDALRSQLADLSSARDSELASVRADLESQLRE 1584
Query: 697 LEENEPRCPLCTRFFESDYSVP----GLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSL 752
EE+ R + ES ++ L ++L+ + ++PE ++ + L ++ +
Sbjct: 1585 REEDIERVR--SELDESKAALESERDALQSELERVLSQVPEVDASQSAAVSDLESERDA- 1641
Query: 753 QELKPVYENIMKLQDTDIPSLR----SKLIELEENVIETKGELKKLKTALETPKTKEKTA 808
L+ ++ +D+++ S+R S+L E EE++ + EL + K ALE+ +
Sbjct: 1642 --LRSQLADLSSARDSELASVRADLESQLREREEDIERVRSELDESKAALESERD----- 1694
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQ-ESKISGMRSTGVDL----DQVLA--------Q 855
+LQ +L + + E++ Q + ES+ +RS DL D LA Q
Sbjct: 1695 -ALQSELERVLSQVPEVDASQSAIVSDLESERDALRSQLADLSSARDSELASVRADLESQ 1753
Query: 856 QKEKKNELNTFRSKIESGQTRLNSHNEKLQS-LQKQKNDIHSKQLTVQGGAGMLKSLED- 913
+E++ ++ RS+++ + L S + LQS L++ + + + L+S D
Sbjct: 1754 LREREEDIERVRSELDESKAALESERDALQSELERVLSQVPEVDASQSAAVSDLESERDA 1813
Query: 914 -----------RKCELEGMDSVYQTELEELGRKVAPIETQLNLA----QSELDALKKEHK 958
R EL + + +++L E + + ++L+ + +SE DAL+ E +
Sbjct: 1814 LRSQLADLSSARDSELASVRADLESQLREREEDIERVRSELDESKAALESERDALQSELE 1873
Query: 959 KKLNE-------EGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRK 1011
+ L++ + A + D + + + R +L L+ + L + A ES +L +R+
Sbjct: 1874 RVLSQVPEVDASQSAAVSDLESERDAL-RSQLADLSSARDSELASVRADLES--QLRERE 1930
Query: 1012 EDIIAKRGVCERTINEINQSIA 1033
EDI ER +E+++S A
Sbjct: 1931 EDI-------ERVRSELDESKA 1945
>gi|15899022|ref|NP_343627.1| purine NTPase [Sulfolobus solfataricus P2]
gi|284175108|ref|ZP_06389077.1| purine NTPase [Sulfolobus solfataricus 98/2]
gi|384432612|ref|YP_005641970.1| Rad50 zinc hook domain protein [Sulfolobus solfataricus 98/2]
gi|18202628|sp|Q97WH0.1|RAD50_SULSO RecName: Full=DNA double-strand break repair Rad50 ATPase
gi|13815551|gb|AAK42417.1| Purine NTPase [Sulfolobus solfataricus P2]
gi|261600766|gb|ACX90369.1| Rad50 zinc hook domain protein [Sulfolobus solfataricus 98/2]
Length = 864
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 1249 ALAETFSRNCGIFALDEPTTNLD---------IKNASDQKNFQLIVITHDEEFIENLTAI 1299
A+A+ N F LDEPT +LD I A+ + Q+IV+THDEE ++ A
Sbjct: 789 AIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQIIVVTHDEEVVQ---AA 845
Query: 1300 DRAYVVRI 1307
D YV+R+
Sbjct: 846 D--YVIRV 851
Score = 40.8 bits (94), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 14 NFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
NF + ++ ++F + +IVG+NG GK++II+ I F+L + +G
Sbjct: 10 NFLSHEHSEIQFMGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRG 54
>gi|340714734|ref|XP_003395880.1| PREDICTED: major antigen-like [Bombus terrestris]
Length = 2044
Score = 43.1 bits (100), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 214/498 (42%), Gaps = 75/498 (15%)
Query: 422 QTTIDKYLSDIKILERTFSD------NENTKQAEINALIVEKVELESKIKSFKQQIEGNK 475
Q IDK +D LE+ D ++ +AE+ L VEK EL+ K+ Q+E +
Sbjct: 1211 QVDIDKSKAD---LEKALKDLLECQASKKALEAEMYRLKVEKGELDKKLVDLTSQLEQQE 1267
Query: 476 KDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNEL 535
K + + N+ S + + +L+ + E+ +L D ++ + EI+ RQ
Sbjct: 1268 KAYE---AEKSARNKGDSEIAASKEELDALKKELGKLRA--DNNRYRIEIDDLGRQLAVT 1322
Query: 536 EDELCVIDAEISILQAQNITLAE----IKSLKNRKESKLADINLLKERHDRAFHLLFDMI 591
++EL E+S+L+ N TL +KSLK+ AD++ LKE++ +LL D
Sbjct: 1323 KNELEKCKEEVSVLRDANNTLKSQLDLLKSLKDEYNKLKADLDSLKEKN---VNLLQDR- 1378
Query: 592 PEENFKNS---LDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAE 648
+NF++ L +I+R++ ++NA+E L A++ N ++ L E
Sbjct: 1379 --KNFEDEYIRLKGEGDGQKAEIDRLRSNLNAEEAAAEKLRADLQNCQTENDRLQKQLNE 1436
Query: 649 LMDRM-ELVLGSKPFEDELDRVTLELKR--------EQEEVSMMTSTQYLFNSYIGKLEE 699
+ + + EL G+ ++E+DR+ L E E ++T + L N
Sbjct: 1437 VKNELDELTKGNNRIKNEIDRLKKALADAEAKIKLLETELSDLLTEKKELVNELY----- 1491
Query: 700 NEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVY 759
RF E +L + E+ EQ K +L + L LK
Sbjct: 1492 ---------RFHE----------QLNNRTNELEEQMAAKDVAKKELADMKDELTALKAAL 1532
Query: 760 ENIMKLQD----------TDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKE-KTA 808
+ + D ++ L +L L+++ + E LK K K
Sbjct: 1533 DKVRSKNDKLRNENEKLNVELTKLNGQLETLKDDNAKLGNENANLKNENANLKNDNAKLT 1592
Query: 809 LSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRS 868
L G L + ++LN L++E + +KI+ + +T +L+ + Q ++ K EL+ RS
Sbjct: 1593 AELTGTKNKLAEAEKQLNNLEKENDDSNNKIADLENTVNELEPLKKQLEDAKKELDRLRS 1652
Query: 869 KIESGQTRLNSHNEKLQS 886
+++ L S N +LQ+
Sbjct: 1653 ELDG----LKSENSELQN 1666
>gi|392971836|ref|ZP_10337228.1| chromosome segregation protein Smc [Staphylococcus equorum subsp.
equorum Mu2]
gi|392509549|emb|CCI60518.1| chromosome segregation protein Smc [Staphylococcus equorum subsp.
equorum Mu2]
Length = 1189
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 36/145 (24%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L + G ++F N V+F +T IVG NG GK+ I + IK+ L G
Sbjct: 1 MVYLKSIDAFGFKSFAEHTN--VQFDEGVTAIVGPNGSGKSNITDAIKWVL------GEQ 52
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S K+ G K E SG +K + +A VKL+
Sbjct: 53 SAKSLR-----GAKMEDIIFSGAEH-------RKAQNYAEVKLK---------------- 84
Query: 121 LSNKNGKDNCATRDTTISRKIFATG 145
L N +GK + ++R+++ +G
Sbjct: 85 LDNSSGKLQLDATEIVVTRRLYRSG 109
>gi|261330551|emb|CBH13535.1| kinesin, putative, (fragment) [Trypanosoma brucei gambiense DAL972]
Length = 1426
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 190/415 (45%), Gaps = 75/415 (18%)
Query: 611 INRIQEDINAKEKHLYTLEANVSNSSKTLRDQ----KRTLAELMDRMELVL--------- 657
+ R+QE+I+ +K L + + + L D + L EL RM+ ++
Sbjct: 543 VARLQEEISTYQKSLADADLELQQQRRVLYDSEVMLEEQLKELNTRMQEMIEENEETTEN 602
Query: 658 -GSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGK-LEENEPRCP-LCTRFFESD 714
++ + +R+ +E KR +EEV ++ + I + L++++ +C L T F++
Sbjct: 603 LLAECRKKHTERLEVEQKRHEEEVDVLLKSHEFELERINQLLQDSDTKCAELTTTLFKTK 662
Query: 715 YSV---PGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRS------------LQELKPV- 758
+ GLV++++ ++E+ E + +T + +Q RS Q+LK
Sbjct: 663 EDLRKTDGLVDEMQMALEELGEASKATETELYGYVEQLRSENSRLSTAIDTLRQQLKESE 722
Query: 759 -----YENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTK-EKTALSLQ 812
+N +K +T + +LR +L E E +V + LK+ +T+L+T + + +++ S++
Sbjct: 723 ASVEDRDNRLKEHETSLDTLRQQLKESEASVEDRDNRLKEHETSLDTLRQQLKESEASVE 782
Query: 813 GDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR----- 867
L ++ L+TL+++L+ E+ + D D L KE + L+T R
Sbjct: 783 DRDNRLKEHEESLDTLRQQLKESEASVE-------DRDNRL---KEHETSLDTLRQQLKE 832
Query: 868 --SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVY 925
+ +E RL H L +L++Q + + S+EDR L+ ++
Sbjct: 833 SEASVEDRDNRLKEHETSLDTLRQQLKESEA-------------SVEDRDNRLKEHETSL 879
Query: 926 QTELEELGRKVAPIE---TQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEE 977
T ++L A +E +L ++ LD L +++L E A ++D +L+E
Sbjct: 880 DTLRQQLKESEASVEDRDNRLKEHETSLDTL----RQQLKESEASVEDRDNRLKE 930
>gi|42519392|ref|NP_965322.1| chromosome partitioning protein Smc [Lactobacillus johnsonii NCC
533]
gi|41583680|gb|AAS09288.1| chromosome partitioning protein Smc [Lactobacillus johnsonii NCC
533]
Length = 1186
Score = 42.0 bits (97), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
L QL + G ++F ADK +RF +T IVG NG GK+ I E I++ + E + G+
Sbjct: 3 LQQLVLNGFKSF-ADKT-TIRFNNGITGIVGPNGSGKSNITEAIRWVM-GEGSAKSLRGE 59
Query: 64 NFVHDPRIGKKDEASASSGK-NFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLS 122
N G + A + + V D R H + +ND V V R +L
Sbjct: 60 NMKDVIFAGSQMRAPMNHAEVELVFDNR------DHQL------ASDNDEVVVTRKIL-- 105
Query: 123 NKNGKDNC-----ATRDTTISRKIFATGVQKN-LGCLQQESVLEMCN 163
+NG+ + R + +G+ + LG + Q V E+ N
Sbjct: 106 -RNGESDYLLNHHPVRLKDVRTLFIESGMSSDSLGIISQGKVDEILN 151
>gi|227826474|ref|YP_002828253.1| Rad50 zinc hook domain-containing protein [Sulfolobus islandicus
M.14.25]
gi|229583636|ref|YP_002842137.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.16.27]
gi|227458269|gb|ACP36955.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.14.25]
gi|228018685|gb|ACP54092.1| Rad50 zinc hook domain protein [Sulfolobus islandicus M.16.27]
Length = 864
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 1249 ALAETFSRNCGIFALDEPTTNLD---------IKNASDQKNFQLIVITHDEEFIENLTAI 1299
A+A+ N F LDEPT +LD I A+ + Q++V+THDEE ++ A
Sbjct: 789 AIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQILVVTHDEEVVQ---AA 845
Query: 1300 DRAYVVRI 1307
D YV+R+
Sbjct: 846 D--YVIRV 851
Score = 40.4 bits (93), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 154/331 (46%), Gaps = 46/331 (13%)
Query: 704 CPLCTRFFESDY------SVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKP 757
CP+C R + ++ +++L+ E+ E+ ++++ K+ R L K
Sbjct: 426 CPVCGRPLDEEHKQKIVEEAKSYISRLELDKNELEEELKKTTDELNKIEKEYRKLSNNKA 485
Query: 758 VYENIMKLQ---DTDIPSLRSK---LIELEENVIETKGELKKLKTALETP----KTKEKT 807
Y+N++K + +I +L ++ L ++EE + + E+K LK E K EK
Sbjct: 486 NYDNVIKQLRKLNEEIENLHNRIEALKDIEEEIKKINVEIKDLKQYYEEFMRLFKYDEK- 544
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGV-----DLD---QVLAQQKEK 859
L+ LD+ ++ +++E+ E+++ G+ + DL+ ++L + K+K
Sbjct: 545 --ELERKKNRLDEMNKKKVEIEKEMRALENELQGLDRKELENKISDLERKKKILDEMKKK 602
Query: 860 KNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELE 919
+ L + ++E Q + EKL +Q +N + + ++ LK E+RK +E
Sbjct: 603 RGVLEDYIGQVELLQEDVKKLREKLNIIQFDENKYNELKTSLDVHNASLKEKENRKSRVE 662
Query: 920 G-MDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDY----TKQ 974
G +DS+ + ++EE+ ++ E QL + ++ + K K + K+Q Y TKQ
Sbjct: 663 GELDSLGK-DIEEISNRIKNYELQLKDKEKIINGINKLEKIRDALGERKLQSYIIMATKQ 721
Query: 975 LEE-------------VKRIKLEILNYTKRG 992
L E +K +++EI+ T RG
Sbjct: 722 LIENNLNDIISKFDLSIKNVEMEIMPKTSRG 752
>gi|94733248|emb|CAK04882.1| novel protein similar to vertebrate early endosome antigen 1, 162kD
(EEA1) [Danio rerio]
Length = 1341
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 55/249 (22%)
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKT-ALETPKTKEKTA 808
+ LQ+ + EN Q ++I L +KL+E E V E +G LK+ + + E K +E+ A
Sbjct: 337 KQLQQQREDKENQGLQQQSEISQLHAKLLEAERQVGELQGRLKEQRQLSGEKLKDREQQA 396
Query: 809 LSLQGDLTLLDQNIRELNT----LQRELER-----------QESKISGMRSTGVDLDQVL 853
LQ L+ L++ ++E +T LQ +L++ Q+S +R DL+QVL
Sbjct: 397 ADLQLKLSRLEEELKESSTKSTDLQHQLDKSKQQHQELQTLQQSTNGKLREAQNDLEQVL 456
Query: 854 AQ-----------------QKEKKNELNTFR----SKIESGQTR---LNSHNEKLQSLQK 889
Q KE ++L T R +KI++G+ LN EK SLQ+
Sbjct: 457 RQIGDKDQKIQNLEALLQKSKESVSQLETEREDLCAKIQAGEGEAAVLNQLQEKNHSLQE 516
Query: 890 Q--------KNDIHS-KQL------TVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGR 934
Q KN S KQ VQ L+S +DR LE + T+L E
Sbjct: 517 QITQLTDKLKNQSESHKQAQDNLHEQVQEQKTHLRSAQDRCQGLETTVTELNTQLTESRE 576
Query: 935 KVAPIETQL 943
K+A ++TQL
Sbjct: 577 KIAQLDTQL 585
>gi|417837336|ref|ZP_12483575.1| chromosome partition protein smc [Lactobacillus johnsonii pf01]
gi|338762531|gb|EGP13799.1| chromosome partition protein smc [Lactobacillus johnsonii pf01]
Length = 1186
Score = 42.0 bits (97), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
L QL + G ++F ADK +RF +T IVG NG GK+ I E I++ + E + G+
Sbjct: 3 LQQLVLNGFKSF-ADKT-TIRFNNGITGIVGPNGSGKSNITEAIRWVM-GEGSAKSLRGE 59
Query: 64 NFVHDPRIGKKDEASASSGK-NFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLS 122
N G + A + + V D R H + +ND V V R +L
Sbjct: 60 NMKDVIFAGSQMRAPMNHAEVELVFDNR------DHQL------ASDNDEVVVTRKIL-- 105
Query: 123 NKNGKDNC-----ATRDTTISRKIFATGVQKN-LGCLQQESVLEMCN 163
+NG+ + R + +G+ + LG + Q V E+ N
Sbjct: 106 -RNGESDYLLNHHPVRLKDVRTLFIESGMSSDSLGIISQGKVDEILN 151
>gi|385825639|ref|YP_005861981.1| chromosome partitioning protein Smc [Lactobacillus johnsonii DPC
6026]
gi|329667083|gb|AEB93031.1| chromosome partitioning protein Smc [Lactobacillus johnsonii DPC
6026]
Length = 1186
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
L QL + G ++F ADK +RF +T IVG NG GK+ I E I++ + E + G+
Sbjct: 3 LQQLVLNGFKSF-ADKT-TIRFNNGITGIVGPNGSGKSNITEAIRWVM-GEGSAKSLRGE 59
Query: 64 NFVHDPRIGKKDEASASSGK-NFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLS 122
N G + A + + V D R H + +ND V V R +L
Sbjct: 60 NMKDVIFAGSQMRAPMNHAEVELVFDNR------DHQL------ASDNDEVVVTRKIL-- 105
Query: 123 NKNGKDNC-----ATRDTTISRKIFATGVQKN-LGCLQQESVLEMCN 163
+NG+ + R + +G+ + LG + Q V E+ N
Sbjct: 106 -RNGESDYLLNHHPVRLKDVRTLFIESGMSSDSLGIISQGKVDEILN 151
>gi|148704364|gb|EDL36311.1| mCG142372 [Mus musculus]
Length = 1806
Score = 42.0 bits (97), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 112/225 (49%), Gaps = 24/225 (10%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 974 KVKNLTEEMAGLDEIIVKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDD 1033
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++I +L L L++++ ++
Sbjct: 1034 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDLENDKQQLDERLKKKDFEL 1087
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELNTFRSKIE----SGQTRLNSHNEKLQSLQKQKNDIH 895
+ + + ++ +Q L Q +KK L ++ +E + + ++N H K + Q+ ND+
Sbjct: 1088 NALNAR-IEDEQALGSQLQKK--LKELQANLEKMCRTLEDQMNEHRSKAEETQRSVNDLT 1144
Query: 896 SKQLTVQGGAGMLKSLEDRK----CELEGMDSVYQTELEELGRKV 936
S++ +Q G L D K +L Y +LE+L R++
Sbjct: 1145 SQRAKLQTENGELSRQLDEKEALISQLTRGKLTYTQQLEDLKRQL 1189
>gi|227890257|ref|ZP_04008062.1| chromosome segregation protein Smc [Lactobacillus johnsonii ATCC
33200]
gi|227849071|gb|EEJ59157.1| chromosome segregation protein Smc [Lactobacillus johnsonii ATCC
33200]
Length = 1186
Score = 42.0 bits (97), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGK 63
L QL + G ++F ADK +RF +T IVG NG GK+ I E I++ + E + G+
Sbjct: 3 LQQLVLNGFKSF-ADKT-TIRFNNGITGIVGPNGSGKSNITEAIRWVM-GEGSAKSLRGE 59
Query: 64 NFVHDPRIGKKDEASASSGK-NFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLS 122
N G + A + + V D R H + +ND V V R +L
Sbjct: 60 NMKDVIFAGSQMRAPMNHAEVELVFDNR------DHQL------ASDNDEVVVTRKIL-- 105
Query: 123 NKNGKDNC-----ATRDTTISRKIFATGVQKN-LGCLQQESVLEMCN 163
+NG+ + R + +G+ + LG + Q V E+ N
Sbjct: 106 -RNGESDYLLNHHPVRLKDVRTLFIESGMSSDSLGIISQGKVDEILN 151
>gi|326676024|ref|XP_003200485.1| PREDICTED: early endosome antigen 1 [Danio rerio]
Length = 1398
Score = 42.0 bits (97), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 55/249 (22%)
Query: 750 RSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKT-ALETPKTKEKTA 808
+ LQ+ + EN Q ++I L +KL+E E V E +G LK+ + + E K +E+ A
Sbjct: 383 KQLQQQREDKENQGLQQQSEISQLHAKLLEAERQVGELQGRLKEQRQLSGEKLKDREQQA 442
Query: 809 LSLQGDLTLLDQNIRELNT----LQRELER-----------QESKISGMRSTGVDLDQVL 853
LQ L+ L++ ++E +T LQ +L++ Q+S +R DL+QVL
Sbjct: 443 ADLQLKLSRLEEELKESSTKSTDLQHQLDKSKQQHQELQTLQQSTNGKLREAQNDLEQVL 502
Query: 854 AQ-----------------QKEKKNELNTFR----SKIESGQTR---LNSHNEKLQSLQK 889
Q KE ++L T R +KI++G+ LN EK SLQ+
Sbjct: 503 RQIGDKDQKIQNLEALLQKSKESVSQLETEREDLCAKIQAGEGEAALLNQLQEKNHSLQE 562
Query: 890 Q--------KNDIHS-KQL------TVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGR 934
Q KN S KQ VQ L+S +DR LE + T+L E
Sbjct: 563 QITQLTDKLKNQSESHKQAQDNLHEQVQEQKTHLRSAQDRCQGLETTVTELNTQLTESRE 622
Query: 935 KVAPIETQL 943
K+A ++TQL
Sbjct: 623 KIAQLDTQL 631
>gi|260583708|ref|ZP_05851456.1| cell division protein Smc [Granulicatella elegans ATCC 700633]
gi|260158334|gb|EEW93402.1| cell division protein Smc [Granulicatella elegans ATCC 700633]
Length = 1186
Score = 42.0 bits (97), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFAL 51
L+++ + G ++F ADK V+ F + +T +VG NG GK+ + E IK+ L
Sbjct: 3 LEKIEMSGFKSF-ADKT-VIEFDKGVTAVVGPNGSGKSNLSEAIKWVL 48
>gi|268319231|ref|YP_003292887.1| chromosome partitioning protein Smc [Lactobacillus johnsonii
FI9785]
gi|262397606|emb|CAX66620.1| chromosome partitioning protein Smc [Lactobacillus johnsonii
FI9785]
Length = 1186
Score = 41.6 bits (96), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 4 LDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFAL 51
L QL + G ++F ADK +RF +T IVG NG GK+ I E I++ +
Sbjct: 3 LQQLVLNGFKSF-ADKT-TIRFNNGITGIVGPNGSGKSNITEAIRWVM 48
>gi|426232734|ref|XP_004010376.1| PREDICTED: LOW QUALITY PROTEIN: myosin-6 [Ovis aries]
Length = 1886
Score = 40.8 bits (94), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 183/423 (43%), Gaps = 85/423 (20%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 971 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLAKSKVKLEQQVDD 1030
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++I +L+ L+ +L+++E I
Sbjct: 1031 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDLDNDKLQLEEKLKKKEFDI 1084
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELN---------------TFRSKIE---SGQTR----- 876
+ + S ++ +Q LA Q +KK + N T R+K+E S R
Sbjct: 1085 NQLNSK-IEDEQALALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSAAPRAALRK 1143
Query: 877 -----LNSHNEKLQSLQKQKNDIHSK----QLTVQGGAGMLKSLEDRKCELEGMDSV--- 924
+ +E++ +LQ+ K + + +L + ++ + K LE M
Sbjct: 1144 KHADSVAELSEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKMSRTLED 1203
Query: 925 ----YQTELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQ-------DYTK 973
Y+ +LEE R + TQ Q+E E ++L E+ A I YT+
Sbjct: 1204 QANEYRAKLEEAQRSLNDFSTQRAKLQTE----NGELSRQLEEKEALISQLTRGKLSYTQ 1259
Query: 974 QLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIA 1033
QLE++KR +LE K L + R L ++ E+ + +R +++ N +A
Sbjct: 1260 QLEDLKR-QLEEEGKAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVA 1318
Query: 1034 -------------NQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYHHTLE 1080
+ LEE K L + +EAV +N + S L K H L+
Sbjct: 1319 QWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNAK-------CSSLEKTKHRLQ 1371
Query: 1081 NCV 1083
N +
Sbjct: 1372 NEI 1374
>gi|395502097|ref|XP_003755422.1| PREDICTED: uncharacterized protein C10orf118 homolog [Sarcophilus
harrisii]
Length = 906
Score = 40.4 bits (93), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 723 KLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEE 782
KLK E+ +Q K ++ + + L++LK ++ M ++ +LR+K+ LE+
Sbjct: 463 KLKVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGM----DELRTLRTKVKCLED 518
Query: 783 NVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGM 842
+ T+ EL K K + K + + L + +++Q +L + ++E+E ++ +
Sbjct: 519 ERLRTEDELSKYKEIINRQKAEIQNLLDR---VKIVEQLQDQLQSGKQEIENLSEEVGSL 575
Query: 843 RSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL---------QKQKND 893
S DL + + +++++EL F K+ S +L S + LQS Q Q +
Sbjct: 576 NSLINDLQEDIEGSRKRESELLLFTEKLTSKNAQLQSESNSLQSQFDKLSCSESQLQSHY 635
Query: 894 IHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDAL 953
H KQ + +LK E RK E + + Q EL +++ + TQ+ + EL
Sbjct: 636 EHMKQTNTDLESRLLKEEELRKNESQAL----QAELTSREKELKTLNTQVEELKDELVTQ 691
Query: 954 KKEHKKKLNEEGAKIQDYTKQLEEVKR 980
+++H + ++D TKQL++ +R
Sbjct: 692 RRKH-------ASNLKDLTKQLQQARR 711
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,189,663,448
Number of Sequences: 23463169
Number of extensions: 880564485
Number of successful extensions: 4062450
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 72772
Number of HSP's that attempted gapping in prelim test: 3534096
Number of HSP's gapped (non-prelim): 324645
length of query: 1491
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1335
effective length of database: 8,698,941,003
effective search space: 11613086239005
effective search space used: 11613086239005
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 84 (37.0 bits)