BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9513
(1491 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W252|RAD50_DROME DNA repair protein RAD50 OS=Drosophila melanogaster GN=rad50 PE=2
SV=4
Length = 1318
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 392/1366 (28%), Positives = 677/1366 (49%), Gaps = 146/1366 (10%)
Query: 1 MALLDQLHIMGIRNFP--ADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++ L I GIR+F AD + ++F P+TLI+GENGCGKTT++EC+K+ALT E P G
Sbjct: 1 MSSIESLSIQGIRSFGTYADDLQSIKFSSPVTLILGENGCGKTTVVECLKYALTGECPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ GK+FVH DP+I +E A +K+Q V + R+
Sbjct: 61 SDRGKSFVH--------------------DPKIFGLNEVLAQIKMQVRDRRGAQVSICRT 100
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGV-------QKNLGCLQQESVLEMCNLIGVSKAI 171
+ +S K K + T D+TI+ F TG Q +L + + + + +GVSKAI
Sbjct: 101 MKVSKKRNKMSFETMDSTIN---FLTGAGQSKREKQDSLSGRSVDIDVAISDFMGVSKAI 157
Query: 172 LNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHY 231
+NNV+FCHQE+SSWPLDE KK+KE FD IF T+YNKAL+ I R +E+ +A+
Sbjct: 158 INNVLFCHQEDSSWPLDESKKLKEKFDAIFGITEYNKALDKIIKLRKEAMEELKIKEANI 217
Query: 232 QATLNYKKEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMST 291
+ K+E + K + +K D + EE MKPI +LV++ RN+
Sbjct: 218 KHVAYLKQEMEVKTLNLQKAQRKCDAIKAQCSECEEEMKPIEARLVEI----RNVEFEIG 273
Query: 292 QYQTKKTERDMIQESCNE----LESSIKQLFSGDKAELQSKLNLFK---INLDEKCSELE 344
+YQ +K E D ++C + L IK+ F G EL +++ F + + +K +E+E
Sbjct: 274 KYQAQKVEMDTKHKNCKDQISTLTLKIKKPFRGTLDELDQEISNFDQRMLEMRQKRTEVE 333
Query: 345 N------------QERLKSQYIQEEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKL 392
QE+L +Q + H +E + L+R +E ++L+
Sbjct: 334 GDLSQIKRSSVAEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVKEFCRELH------- 386
Query: 393 NNLADTLCLDTTAKSQYTPEE-GEGLIKMSQTTIDKYLSDIKILERTFSDNENTKQAEIN 451
+ +D Q PE+ GE L + I K+ +I+E+ + ++Q +I+
Sbjct: 387 ------IPIDCDLVEQ--PEKMGEVLRDIEAMIITKHCEITEIVEQN-EKADRSRQVKID 437
Query: 452 ALIVEKVELESKIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQ 511
L +E + E + + ++Q E +K++ + +I ++ S L+ L+ ++N VN +
Sbjct: 438 ELRIELTKSEQSVTAQEKQRESSKRESETLGVEIKKIETSMQDLKKLEKEINEVNELYES 497
Query: 512 LSKSLDPDQLKNEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRK-ESKL 570
+K++D +K+ I E + + +D +++ L + +AE SLK ++ + K
Sbjct: 498 ATKNIDQQAIKDAIARKKASIAENQIQFKKLDEQLTFLGSMAKLVAEC-SLKQKELDKKN 556
Query: 571 ADINLLKERHDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEA 630
+++ ++ RH F LF N++ S+ + +I + E N ++ + E
Sbjct: 557 QEVHRVRSRHSDHFGKLFKEPITCNYRRSMQVVYEKLRREIQELNEKANTQKLKEQSYEI 616
Query: 631 NVSNSSKTLRDQKRTLAELMDRMELVLG---SKPFEDELDRVTLELKREQEEVSMMTSTQ 687
N + D R EL D EL+ S P++D L+R + + Q + + S++
Sbjct: 617 KRKN---LISDISRMEKELKDSEELIYQKCRSTPYDDLLERSKTTISKLQFDHGALKSSE 673
Query: 688 YLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCK 747
L+ YI K++E EP CPLC SD + L ++L +I+++P+ + +
Sbjct: 674 ALYKKYIQKMDE-EPSCPLCHHNMTSDEAC-DLTSELTDEIQKLPDNITRAEKALKAEQI 731
Query: 748 QQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKT 807
+ +L +LKP + +L+D+ +P + +L ++EE + ++ E + L + P +
Sbjct: 732 KYENLLQLKPTILKVKELKDS-LPQKKEELKKVEELLGDSVSEYETLIALIGEPTHNMEL 790
Query: 808 ALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFR 867
A S+ GD++LLD+ +++ L ++L+ Q+ ++ + V +D + A++ + EL T R
Sbjct: 791 ANSMMGDMSLLDEALKDSARLTKDLDLQKGQLPASYDSSVSMDDLQAEKSKVSKELETER 850
Query: 868 SKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQT 927
++ES Q + + L L+++KN + +Q+ ++ G L L++R +L + +
Sbjct: 851 KELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVAS 910
Query: 928 ELEELGRKVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILN 987
E+ EL K+ P++ L A E + LKK +KL + +K Y +++R+ E +
Sbjct: 911 EISELKAKIQPLKLNLRAAIEEKERLKKSESEKLAQLNSKYNSYKSTDHDIQRLNKEAED 970
Query: 988 YTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLT 1047
Y K ++ L E + + + A+ + + I +NQ E DLK+N
Sbjct: 971 YAKLDLRNEIKKLDEIIMASKDKLRKLEAEISLKTDELETIKTECSNQQTVERDLKDNRE 1030
Query: 1048 LLEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVI-------------------KYHS 1088
L + ++ AKL E ++ + + +L + + E + + HS
Sbjct: 1031 LKQLEDKEAKLRESCQVLDKQLGNLDFHSVSKEKVNLTKQRDKATVRKGELLGQLGEIHS 1090
Query: 1089 QKMRSINRLIRE------------YWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQK 1136
Q +N+L RE + Y+++++ + I DL +Y LE +I++HS+K
Sbjct: 1091 Q----VNKLQREIDEPRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEK 1146
Query: 1137 MRSINRLIREYWTRIYQGNDIDYISIAAD---VGTGSEKRRTYNYRVVQKKNGIEQDMRN 1193
M INRLIREYW +IY+GNDIDYI + D +++R+TYNYRVVQ KN E +MR
Sbjct: 1147 MEMINRLIREYWRKIYRGNDIDYIQVKTDEVSSDASADRRKTYNYRVVQSKNYSEIEMRG 1206
Query: 1194 RCSAGQRVLACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAET 1253
RCSAGQRVLA LIIRL +++ + V+ DE T +DRA + +L E
Sbjct: 1207 RCSAGQRVLASLIIRLALAETFSSNCGVLALDEP----TTNLDRANI-------NSLCEA 1255
Query: 1254 FSRNCGIFALDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAI 1299
NC ++ Q NF LI+ITHDE F+ +L I
Sbjct: 1256 L--NCI------------VEERQSQSNFMLIIITHDENFVSSLGKI 1287
>sp|Q92878|RAD50_HUMAN DNA repair protein RAD50 OS=Homo sapiens GN=RAD50 PE=1 SV=1
Length = 1312
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 373/1367 (27%), Positives = 704/1367 (51%), Gaps = 127/1367 (9%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + + V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
++ + K+ K T + I+R V + C + + EM + +GVSKA+LNNVIFC
Sbjct: 100 MVCTQKSKKTEFKTLEGVITRTKHGEKVSLSSKCAEIDR--EMISSLGVSKAVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KALE+++ R +++ E + + YK
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQYK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + + E + P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLTSSKEIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK +L + R + +E +
Sbjct: 278 RKKQMEKDNSELEEKMEKVFQGTDEQLNDLYHNHQRTVREKERKLVDCHRELEKLNKESR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ +E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQEKSELLVEQGRLQLQADRHQEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
K+ + + L F++ E KQ +I+ + +K +EL+S+I S KQ
Sbjct: 398 KLVRERQEGEAKTANQLMNDFAEKETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQN-- 455
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + + LK E+ + ++
Sbjct: 456 ----ELKNVKYELQQLEGSSDRILELDQELIKAERELSKAEKNSNVETLKMEVISLQNEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRTLRKLDQEMEQLNHHTTTRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASSEQNKNHINNELKRKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ E+++ ++ +M+ +++ +I +L +EN+ CP+C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + K++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR+KL + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ G+DLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEG-MDSVYQTELEELGRKVAPIETQLNLA 946
+ N++ S++L + + LE++ EL + S+Y+ E+++ +V+P+ET L
Sbjct: 864 KSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYR-EIKDAKEQVSPLETTLEKF 922
Query: 947 QSELDAL--KKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESV 1004
Q E + L KK K+ ++ K+ D ++++ + +I NY + G +E+
Sbjct: 923 QQEKEELINKKNTSNKIAQD--KLNDIKEKVKNIHGYMKDIENYIQDGK-DDYKKQKET- 978
Query: 1005 QKLNQRKEDIIAKRGVCERTINEIN-------QSIANQSLEEIDLKNNLTLLEKKEAVAK 1057
+LN+ +IA+ CE+ +IN Q I Q ++E L++NLTL ++ E + +
Sbjct: 979 -ELNK----VIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRNEELKE 1033
Query: 1058 LNEELK-----LSEIMISDLTKYHHTLENCV-------------IKYHSQKMRSINRLIR 1099
+ EE K + ++ + + H LE + K + +++ + +R
Sbjct: 1034 VEEERKQHLKEMGQMQVLQMKSEHQKLEENIDNIKRNHNLALGRQKGYEEEIIHFKKELR 1093
Query: 1100 EYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTR 1150
E R + K E+MI DL Y+ TL+ ++K+HS KM IN++IR+ W
Sbjct: 1094 EPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRS 1153
Query: 1151 IYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLII 1207
Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+VLA LII
Sbjct: 1154 TYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLII 1213
Query: 1208 RLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPT 1267
RL +++ +I DE T +DR + + AL E
Sbjct: 1214 RLALAETFCLNCGIIALDEP----TTNLDRENIESLAH---ALVEI-------------- 1252
Query: 1268 TNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGL 1314
IK+ S Q+NFQL+VITHDE+F+E L + YV + R K +
Sbjct: 1253 ----IKSRSQQRNFQLLVITHDEDFVELLGRSE--YVEKFYRIKKNI 1293
>sp|P70388|RAD50_MOUSE DNA repair protein RAD50 OS=Mus musculus GN=Rad50 PE=1 SV=1
Length = 1312
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 360/1346 (26%), Positives = 681/1346 (50%), Gaps = 159/1346 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ I+G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S KN K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKNKKTEFKTLEGVITRMKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMS-VMSTQYQTKK 297
++A + I + + S E + + E+ ++P+ +L ++ E N+S +M + K
Sbjct: 218 EKACEIRDQITSKEAQLASSQEIVRSYEDELEPLKNRLKEI---EHNLSKIMKLDNEIKA 274
Query: 298 TE--RDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
E + +++ +ELE ++++F G +L + + + EK L + +R + +
Sbjct: 275 LESRKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLNK 334
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGE 415
E + + E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 335 EARLLNQEKAELLVEQGRLQLQADRHQEHIRARDSLIQSLATHLELDGFERGPFSERQIK 394
Query: 416 G---LIKMSQ----TTIDKYLSDIKILERTFSDNENTKQAEINAL------IVEKVELES 462
L+K Q T + LSD+ +D E KQ +++ L + +EL++
Sbjct: 395 NFHELVKERQEREAKTASQLLSDL-------TDKEALKQRQLDELRDRKSGLGRTIELKT 447
Query: 463 KIKSFKQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLK 522
+I + KQ +L +V +++ ++ S + L +L + E+ + K+ + LK
Sbjct: 448 EILTKKQ------SELRHVRSELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLK 501
Query: 523 NEIEAWIRQRNELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDR 582
E+ + ++ +L+ L +D E+ L T +++ L K K I +K RH
Sbjct: 502 AEVMSLQNEKADLDRSLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSD 561
Query: 583 AFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQ 642
L P K L+ L S + +IN+ ++ + K L + E N ++ + L+ +
Sbjct: 562 ELTSLLGYFPN---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKK 618
Query: 643 KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENE 701
+ L+ D++ V GS+ E +L R+ E+++ ++ +M+ +++ +I +L +EN+
Sbjct: 619 EEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQ 678
Query: 702 PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYEN 761
CP+C R F+++ + +++ L++K++ P++ + ++ + + +++ + L PV ++
Sbjct: 679 SCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPVRQS 738
Query: 762 IMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQN 821
I+ L++ +IP LR++L + ++ K ++++ +T L T +E++A D+T++++
Sbjct: 739 IIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERF 798
Query: 822 IRELNTLQRELERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRL 877
EL ++R++ +Q +K+ GVDLD QV +++EK++ L+T SKIE + +
Sbjct: 799 QMELKDVERKIAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHRLDTVTSKIELNRKLI 853
Query: 878 NSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVA 937
E++Q L+ + N++ S++L + + +E++ EL E+++ +++
Sbjct: 854 QDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQSLNREIKDAKEQIS 913
Query: 938 PIETQLNLAQSELDALKKEHKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG--- 992
P+ET L Q E + L H+K + + A KI D ++++ + +I NY + G
Sbjct: 914 PLETALEKLQQEKEELI--HRKHTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDD 971
Query: 993 ----TLTQLAALRESVQKLNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL 1048
T+L + + + + +E I G + Q I Q ++E L++NLTL
Sbjct: 972 YKKQKETELNGVAVQLNECEKHREKINKDMGT-------MRQDIDTQKIQERWLQDNLTL 1024
Query: 1049 LEKKEAVAKLNEELK-----LSEIMISDLTKYHHTLE---NCVIKYHS----------QK 1090
++++ + ++ EE K + ++ + + H LE + + + HS +
Sbjct: 1025 RKRRDELKEVEEEPKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKGYEDE 1084
Query: 1091 MRSINRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSIN 1141
+ + +RE R + K E+MI DL Y+ TL+ ++K+HS KM IN
Sbjct: 1085 ILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEIN 1144
Query: 1142 RLIREYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAG 1198
++IR+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAG
Sbjct: 1145 KIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAG 1204
Query: 1199 QRVLACLIIRLFI---------------------------------------SDQKNFQL 1219
Q+VLA LIIRL + S Q+NFQL
Sbjct: 1205 QKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQL 1264
Query: 1220 IVITHDEEFIENLTAIDRAYVVRIVR 1245
+VITHDE+F+E L + YV + R
Sbjct: 1265 LVITHDEDFVELLGRSE--YVEKFYR 1288
>sp|Q9JIL8|RAD50_RAT DNA repair protein RAD50 OS=Rattus norvegicus GN=Rad50 PE=1 SV=1
Length = 1312
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 351/1330 (26%), Positives = 668/1330 (50%), Gaps = 151/1330 (11%)
Query: 1 MALLDQLHIMGIRNFP-ADKNR-VVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
M+ ++++ +G+R+F DK++ ++ F PLT++VG NG GKTTIIEC+K+ T ++P G
Sbjct: 1 MSRIEKMSTLGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG 60
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRS 118
+ G FVHDP++ ++ + A ++LQ N + V V RS
Sbjct: 61 ---------------------TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVLVQRS 99
Query: 119 LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFC 178
+L S K+ K T + I+R V + C + + EM + +GVSK++LNNVIFC
Sbjct: 100 MLCSQKSKKTEFKTLEGVITRIKHGEKVSLSSKCAEIDR--EMISCLGVSKSVLNNVIFC 157
Query: 179 HQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYK 238
HQE+S+WPL EGK +K+ FDEIF AT+Y KAL++++ R +++ E + + K
Sbjct: 158 HQEDSNWPLSEGKALKQKFDEIFSATRYIKALDTLRQVRQTQGQKVKECQTELKYLRQNK 217
Query: 239 KEADSKKQLIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKT 298
++A + I + + S E + E ++P+ +L ++ + + + + +
Sbjct: 218 EKACEIRDQITSKEAQLASSREIVKAYENELEPLKNRLKEIEHNLSKIMRLDNEIKALDS 277
Query: 299 ERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEK 358
+ +++ +ELE ++++F G +L + + + EK L + +R + +E +
Sbjct: 278 RKKQMEKDNSELEQKMEKVFQGTDEQLNDLYHNHQRTVREKERRLVDCQRELEKLSKEAR 337
Query: 359 QSHTHINEAQMKLGKLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLI 418
+ E ++ G+L+ + H++ + + +LA L LD + ++ + +
Sbjct: 338 LLNQERAELLVEQGRLQLQADRHQEHIRARDSLIQSLAAHLELDGFERGPFSERQIKNFH 397
Query: 419 KMSQTTIDKYLSDIKILERTFSDNENTKQAEINALIVEK------VELESKIKSFKQQIE 472
++ + ++ L +D E KQ +++ + +K +EL+++I + KQ
Sbjct: 398 ELVRERQEREAKTASQLLSDLTDKEALKQRQMDEMRDKKSGLGRMIELKTEILTKKQ--- 454
Query: 473 GNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQR 532
+L NV ++ ++ S + L +L + E+ + K+ + LK EI ++
Sbjct: 455 ---TELRNVRNELQQLEGSSDRILELDQELTKAERELSKAEKNSSIETLKAEILNLQSEK 511
Query: 533 NELEDELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIP 592
+L+ L +D E+ L T +++ L K K I +K RH L P
Sbjct: 512 ADLDRNLRKLDQEMEQLNHHTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLLGYFP 571
Query: 593 EENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNSSKTLRDQKRTLAELMDR 652
K L+ L S + +IN+ ++ + K L + E N ++ + L+ ++ L+ D+
Sbjct: 572 N---KKQLEDWLHSKSKEINQTRDRLAKLNKELASAEQNKNHINNELKKKEEQLSSYEDK 628
Query: 653 MELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL-EENEPRCPLCTRFF 711
+ V GS+ FE +LDR+ ++++ ++ +M+ +++ +I +L +EN+ CP C R F
Sbjct: 629 LFDVCGSQDFESDLDRLKEDIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPGCQRVF 688
Query: 712 ESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIP 771
+++ + +++ L++K++ P++ + ++ + + +++ + L P+ ++I+ L++ +IP
Sbjct: 689 QTEAELQEVISDLQSKLRLAPDKLKSTESELKKKERRRDEMLGLVPMRQSIIDLKEKEIP 748
Query: 772 SLRSKLIELEENVIETKGELKKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRE 831
LR++L + ++ K ++++ +T L T +E++A D+T++++ EL ++R+
Sbjct: 749 ELRNRLQSVNRDIQRLKNDIEEQETLLGTVMPEEESAKVCLTDVTIMERFQMELKDVERK 808
Query: 832 LERQESKISGMRSTGVDLD----QVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSL 887
+ +Q +K+ GVDLD QV +++EK+++L+T SKIE + + E++Q L
Sbjct: 809 IAQQAAKLQ-----GVDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHL 863
Query: 888 QKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQ 947
+ + N++ S++L + + +E++ EL TE++ L R++ + Q+N +
Sbjct: 864 KSKTNELKSEKLQIATNLQRRQQMEEQTVEL-------STEVQSLNREIKDAKEQINPLE 916
Query: 948 SELDALKKE-----HKKKLNEEGA--KIQDYTKQLEEVKRIKLEILNYTKRG----TLTQ 996
L+ L++E H+K + + A KI D ++++ + +I NY + G +
Sbjct: 917 IALEKLQQEKEELIHRKNTSNKMAQDKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQK 976
Query: 997 LAALRESVQKLNQ---RKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTL----- 1048
L E V +LN+ KE I + G + Q I + ++E L++NLTL
Sbjct: 977 ETELNEVVIQLNECDKHKEKINKEMGT-------MRQDIDTKKIQERWLQDNLTLRKRRE 1029
Query: 1049 ---------------LEKKEAVAKLNEELKLSEIMISDLTKYHHTLENCVIKYHSQKMRS 1093
+ + + + NE KL E + D K +H+L K + +++
Sbjct: 1030 ELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENI--DTIKRNHSLALGRQKGYEEEILH 1087
Query: 1094 INRLIREYWTRIYQLKLSEIMI---------SDLTKYHHTLENCVIKYHSQKMRSINRLI 1144
+ +RE R + K E+MI DL Y+ TL++ ++K+HS KM IN++I
Sbjct: 1088 FKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKMEEINKII 1147
Query: 1145 REYWTRIYQGNDIDYISIAADVG---TGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRV 1201
R+ W Y+G DI+YI I +D + S+KRR YNYRVV K DMR RCSAGQ+V
Sbjct: 1148 RDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKV 1207
Query: 1202 LACLIIRLFI---------------------------------------SDQKNFQLIVI 1222
LA LIIRL + S Q+NFQL+VI
Sbjct: 1208 LASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVI 1267
Query: 1223 THDEEFIENL 1232
THDE+F+E L
Sbjct: 1268 THDEDFVELL 1277
>sp|P12753|RAD50_YEAST DNA repair protein RAD50 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD50 PE=1 SV=1
Length = 1312
Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 346/1363 (25%), Positives = 630/1363 (46%), Gaps = 210/1363 (15%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ + +L I GIR+F ++ + F +PLTLIVG NG GKTTIIEC+K+A T + P
Sbjct: 1 MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSL- 119
S G F+HDP+I + + A VKL T N + V R++
Sbjct: 59 -------------------SKGGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQ 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
LL K ++ I +G + L E ++ +GV KAIL VIFCH
Sbjct: 100 LLMKKTTTTFKTLEGQLVA--INNSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCH 157
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIP-EIKAHYQATLNYK 238
QE+S WPL E +K+ FDEIF A K+ KAL+++K ++K++ +IK Q+ + K
Sbjct: 158 QEDSLWPLSEPSNLKKKFDEIFQAMKFTKALDNLK----SIKKDMSVDIKLLKQSVEHLK 213
Query: 239 KEADSKKQLIYNNTQ---KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQT 295
+ D K + N Q K DQ EE+ IE + I EK +L + ++ + ++ +
Sbjct: 214 LDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLNEITEKSDKLFKSNQDFQKILSKVEN 273
Query: 296 KKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQ 355
K + I + L +SI + K +LQ+ L F L +K ++L + E S
Sbjct: 274 LKNTKLSISDQVKRLSNSI-DILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKD 332
Query: 356 EEKQSHTHINEAQMKLGKLERDEETHKK-------LNDTLKTKLNNLADTLCLDTTAKSQ 408
+ + N + G+LE +ET++K L + + K L++ D A+
Sbjct: 333 RQSSLQSLSNSLIRRQGELEAGKETYEKNRNHLSSLKEAFQHKFQGLSNIENSDM-AQVN 391
Query: 409 YTPEEGEGLIKMSQT-TIDKYLSDIKILERTFSDNENTKQAEINALIVEKVELESKIKSF 467
+ + + I T TID++ DI++ E SD +++ + ++S
Sbjct: 392 HEMSQFKAFISQDLTDTIDQFAKDIQLKETNLSD------------LIKSITVDS----- 434
Query: 468 KQQIEGNKKDLTNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQLS------KSLDPDQL 521
Q +E NKKD + +I E+ + + + L T+ + +N E++ L +S + + +
Sbjct: 435 -QNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQ-DSLNHELENLKTYKEKLQSWESENI 492
Query: 522 KNEIEAWIRQRNELEDELCVIDAEISILQ-------AQNITLAEIKSLKNRKESKLADIN 574
++ I ++N +E+ +++ +I Q Q A++ +K +KL ++
Sbjct: 493 IPKLNQKIEEKN---NEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKSINTKLDELQ 549
Query: 575 LLKER--HDRAFHLLFDMIPEENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANV 632
+ E+ +D +F + E F+ + D + IN +Q++I K ++ L+
Sbjct: 550 KITEKLQNDSRIRQVFPLTQE--FQRA-DLEMDFQKLFIN-MQKNIAINNKKMHELDRRY 605
Query: 633 SNS-------SKTLRDQKRTLAELMDRMELVLGSKP-------FEDELDRVTLELKREQE 678
+N+ K L+D +++ +++ +L+ + P + D L+ L K E
Sbjct: 606 TNALYNLNTIEKDLQDNQKSKEKVI---QLLSENLPEDCTIDEYNDVLEETELSYKTALE 662
Query: 679 EVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNK 738
+ M +T FN ++ E + C LC+R FE++ L+ +LKTK N +
Sbjct: 663 NLKMHQTT-LEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKT-----DANFE 716
Query: 739 KTHIDQLCKQQRSLQELKPVYENIMKLQDTD--IPSLRSKLIELEENVIETKGELKKLKT 796
KT D + ++ L L+ + ++I+ L + I + + L + +E +K +L +L+
Sbjct: 717 KTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELE- 775
Query: 797 ALETPKTKEKTALS------LQGDLTLLDQNIREL----NTLQRELERQESKISGMRSTG 846
+++ K K++ L+ L T L++ +++L T+ EL + G+++
Sbjct: 776 -VDSTKLKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQT-- 832
Query: 847 VDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAG 906
+D++ QQ++ + L R I Q +EK++ + N I K+LTV
Sbjct: 833 --VDELRDQQRKMNDSLRELRKTISDLQME---KDEKVRENSRMINLIKEKELTVSEIES 887
Query: 907 ML-------KSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK 959
L S+ ++ + +DS ++EL ++ ++ + + AQS LD +K E
Sbjct: 888 SLTQKQNIDDSIRSKRENINDIDS----RVKELEARIISLKNKKDEAQSVLDKVKNERDI 943
Query: 960 KLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRG 1019
++ + + D + ++ + I E++++ +G L+ ++++L K ++ +
Sbjct: 944 QVRNKQKTVADINRLIDRFQTIYNEVVDFEAKG----FDELQTTIKELELNKAQMLELKE 999
Query: 1020 VCERTINEINQS---IANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLSEIMISDLTKYH 1076
+ NE+N+ +A+ + EE +LK NL L+E K + + E+ ++ ++ +
Sbjct: 1000 QLDLKSNEVNEEKRKLADSNNEEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDK 1059
Query: 1077 HTLENCVIKYHSQKMRSINR--------------------------LIREYWTRIYQLKL 1110
+ E+ ++ +K+ S N + + Y +L+
Sbjct: 1060 YQEESLRLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQT 1119
Query: 1111 SEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADVGTGS 1170
+ D+ Y L++ ++KYH KM+ INR+I E W R Y G DID I I +D + +
Sbjct: 1120 RSFVTDDIDVYSKALDSAIMKYHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSST 1179
Query: 1171 EKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD----------------- 1213
K ++YNYRVV K +E DMR RCSAGQ+VLA +IIRL +S+
Sbjct: 1180 VKGKSYNYRVVMYKQDVELDMRGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTN 1239
Query: 1214 ----------------------QKNFQLIVITHDEEFIENLTA 1234
QKNFQLIVITHDE+F+ ++ A
Sbjct: 1240 LDEENIESLAKSLHNIINMRRHQKNFQLIVITHDEKFLGHMNA 1282
>sp|Q9SL02|RAD50_ARATH DNA repair protein RAD50 OS=Arabidopsis thaliana GN=RAD50 PE=1 SV=2
Length = 1316
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 122/215 (56%), Gaps = 22/215 (10%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M+ +D++ I GIR+F + VV F RPLTLIVG NG GKTTIIEC+K + T E P A
Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNAR 60
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQC-TCENNDTVCVVRSL 119
SG +F+HDP++ +G+ ET A +KL+ T D VC +RS
Sbjct: 61 SGHSFIHDPKV---------AGET-----------ETKAQIKLRFKTAAGKDVVC-IRSF 99
Query: 120 LLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCH 179
L+ K K ++ + TG + L + E+ L+GVSKAIL NVIF H
Sbjct: 100 QLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVH 159
Query: 180 QENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
Q+ S+WPL + +K+ FD+IF AT+Y KALE IK
Sbjct: 160 QDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIK 194
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 57/209 (27%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+ ++ ++ QLK +E+ DL +Y++ L+ ++++H+ KM IN++IRE W + Y+G D+D
Sbjct: 1117 KRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMD 1176
Query: 1159 YISIAADV-GTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQKNF 1217
YI I +D G G+ R+Y+Y+V+ + E +MR RCSAGQ+VLA LIIRL
Sbjct: 1177 YIRIHSDSEGAGT---RSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRL-------- 1225
Query: 1218 QLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKNASD 1277
ALAETF NCGI ALDEPTTNLD N+
Sbjct: 1226 -------------------------------ALAETFCLNCGILALDEPTTNLDGPNSES 1254
Query: 1278 --------------QKNFQLIVITHDEEF 1292
Q+NFQLIVITHDE F
Sbjct: 1255 LAGALLRIMEDRKGQENFQLIVITHDERF 1283
>sp|Q54CS9|RAD50_DICDI DNA repair protein RAD50 OS=Dictyostelium discoideum GN=rad50 PE=3
SV=1
Length = 1351
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 165/652 (25%), Positives = 310/652 (47%), Gaps = 100/652 (15%)
Query: 662 FEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKLEENEPRCPLCTRFFESDYSVPGLV 721
FE++++ + L L++ ++ ++ S L+ YI K +++ C LC + + V
Sbjct: 691 FENKINEMKLSLEKLEKSFIVLESEDILYKEYIEKANQDK-ECSLCKNEMNGN-ELTSFV 748
Query: 722 NKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELE 781
+ L+T +IP Q K I Q +L P+ +L + IP L+ E +
Sbjct: 749 HTLETHCNDIPNQLKQLKIEISNSKIQLEKFNKLLPIIVKREELIEKSIPELK----ESQ 804
Query: 782 ENVIETKGELKKLKTALETPKTKE----KTALSLQGDLTL--LDQNIRELNTLQRELERQ 835
+N++E +LK + LE E ++ L Q L +DQ + + +++ E++++
Sbjct: 805 KNLLEQ--QLKSNEMVLEKQNQIESLESQSVLYQQVTLVFQYIDQTKQSIQSIESEIQKE 862
Query: 836 ESKI----SGMRSTG-VDLDQVLAQQKEK--KNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
E +I S +R+ VD D + Q++ K + E++ F +K ++ Q + +L S++
Sbjct: 863 EKEIMKQSSDLRTIEEVDKDLEIQQEQLKTIEKEISNFTNKQKNDQIGIFEKERQLISIK 922
Query: 889 KQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQS 948
Q T++ +G++ L D K EL+ + Q E+E L + + ++
Sbjct: 923 NQLT-------TIKSASGIIDHLRDTKKELQSNNQQLQLEIENLQQSIDQSNNDAKQLEN 975
Query: 949 ELDALKKEHKKKLNEEGAKIQDYTKQLEEVKRIKLEILNYTKRGTLTQLAALRESVQKLN 1008
E L+ E +KK++ + ++ +L+ + ++ +IL+ ++ QL ++E Q+L
Sbjct: 976 EFQQLEIEFEKKIDAYSKEKNTFSVRLDSINSLQSKILDPSE--LCKQLNEIQEKNQELE 1033
Query: 1009 QRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELK----- 1063
+ + ++ I+ I Q+++++ + + + +N++ + K V ++ ++
Sbjct: 1034 SNLSTLSQDYLIGQQHISTIQQNLSSKDITKRAISDNISFRQHKNNVEQIIRQISRKNEL 1093
Query: 1064 LSEIMISDLTKYHHTLENCV---------IKYHSQKMRS-INRLIREYWTRIYQ------ 1107
+ E+M S L + LE + I + ++S IN +E Y+
Sbjct: 1094 IKEMMQSQLEIDSNKLEQEINSLKSKFDQITGQTAVLQSQINSNRQELSKPTYKNIDDVN 1153
Query: 1108 ------LKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYIS 1161
L+ +E + DL KY+ L+ ++KYH+ KM INR I+E W Y+G+DID I
Sbjct: 1154 KDLLIKLQTTETVGKDLDKYYKALDKSLMKYHTLKMDEINRSIKEIWQTTYKGSDIDTIE 1213
Query: 1162 I-AADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD------- 1213
I + + GT + +T NYRVV K +E DMR RCSAGQ+VLACL+IRL +++
Sbjct: 1214 IRSEESGTAN---KTINYRVVMIKGDVELDMRGRCSAGQKVLACLVIRLALAENFCSNCG 1270
Query: 1214 --------------------------------QKNFQLIVITHDEEFIENLT 1233
QK FQLI+ITHDEEF++ L+
Sbjct: 1271 ILALDEPTSHLDRANIESFANSLLNIIESRKSQKGFQLIIITHDEEFVQYLS 1322
>sp|C6KSQ6|RAD50_PLAF7 Probable DNA repair protein RAD50 OS=Plasmodium falciparum (isolate
3D7) GN=PFF0285c PE=3 SV=1
Length = 2236
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 57/217 (26%)
Query: 1099 REYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDID 1158
+EY +I ++ + + +I DL +H + + +IK+HS KM+ IN I+ W R+Y DID
Sbjct: 2033 KEYKKKIIEIFVYKNLIKDLQNFHFSFDQAIIKFHSLKMQEINLSIKNLWRRVYNSADID 2092
Query: 1159 YISIAADVGT----GSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISDQ 1214
YI I +D+ T S +RR+YNYRVV K+ E DM+ RCS+GQ+VL+ +IIRL
Sbjct: 2093 YIYIKSDIQTEPTDKSSQRRSYNYRVVMVKDNCELDMKGRCSSGQKVLSSIIIRL----- 2147
Query: 1215 KNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFALDEPTTNLDIKN 1274
ALAE+FS CGI ALDEPTTNLD N
Sbjct: 2148 ----------------------------------ALAESFSIKCGILALDEPTTNLDKAN 2173
Query: 1275 ASD--------------QKNFQLIVITHDEEFIENLT 1297
+ + +FQLI+ITHD F++ L+
Sbjct: 2174 SRNLASLLANIVELRKSSSSFQLILITHDNYFVDILS 2210
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 42/226 (18%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
M L+++ I GIR++ + ++ F P+T+I G NG GK+TIIEC+K + T ++P A
Sbjct: 1 MTTLEKIGIQGIRSYNDEDVEILEFATPITIIYGNNGSGKSTIIECLKVSCTGDFPPNAE 60
Query: 61 SGKNFVHDPRIGKKDEASASSGK--NFVHDPRIG---------KKDETHAIVKLQCTCEN 109
GK+F+HDP I K N ++ RIG KD+ + +N
Sbjct: 61 KGKSFLHDPLISNKMNIRGKIDVLLNNYNNKRIGISRSYNLFYSKDKNKKVKHTFRALDN 120
Query: 110 NDTVCVVRS--LLLSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGV 167
N + + L+++NK C + I + L+GV
Sbjct: 121 NIIIKKEKGDDLIITNK-----CVDINNHIPK------------------------LMGV 151
Query: 168 SKAILNNVIFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESI 213
SKA+L NVIFCH + + WP E K+K+ FDE+F ++K LE +
Sbjct: 152 SKALLENVIFCHHDENLWPFSESIKIKKKFDELFGDDHFSKILEEL 197
>sp|Q8SRK6|RAD50_ENCCU DNA repair protein RAD50 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RAD50 PE=1 SV=1
Length = 1247
Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 110/217 (50%), Gaps = 25/217 (11%)
Query: 1 MALLDQLHIMGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGAS 60
MA + +L I G+R+F ++ + F PLTLIVG NG GKTTIIE +K+A T P
Sbjct: 1 MASIKKLMIRGVRSFSHKESNTLEFYSPLTLIVGANGTGKTTIIESLKYATTGSLPPN-- 58
Query: 61 SGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLL 120
S G F+HDP + E VKL T + +T+ R++
Sbjct: 59 -------------------SRGGAFIHDPSVAGLAEVQGQVKLLFTNVHGETMICSRTIQ 99
Query: 121 LSNKNGKDNCATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ 180
L+ + + T ++ I + GV G + E M GVS +IL ++IFCHQ
Sbjct: 100 LAQRRDRREQKTLESVIWAERDGEGVSGRSGDVDAE----MPQHFGVSGSILESIIFCHQ 155
Query: 181 ENSSWPLDEGKKVKEIFDEIFDATKYNKALESIKIQR 217
E S+WPL E VK+ D+IF + KY KAL+S+K R
Sbjct: 156 EESTWPLGEPVVVKKKLDDIFASAKYGKALDSLKSSR 192
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 29/249 (11%)
Query: 1083 VIKYHSQKMRSINRLIREYWTRIYQLKLSEIMISDLTKYHHTLENCVIKYHSQKMRSINR 1142
V Y + ++ R + Y ++K E+ DL K L+ ++ +H+ K+ +N
Sbjct: 1025 VKSYKQELLKDHGRTVENYNKCFIEVKALELSCMDLDKCIQALDKAIVDFHTSKLEEVNA 1084
Query: 1143 LIREYWTRIYQGNDIDYISIAADVGTGSEKRRTYNYRVVQKKNGIEQDMRNRCSAGQRVL 1202
+++ WT Y+G+D+D+I I T S +RTYNY+VV K G+E DMR R SAGQ+++
Sbjct: 1085 TLKDLWTNTYRGDDVDWIKIK----TESSGQRTYNYKVVFVKGGVELDMRGRSSAGQKMI 1140
Query: 1203 ACLIIRLFISDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKALAETFSRNCGIFA 1262
A ++IRL ++D V+ D E T +DR + ++LA T SR
Sbjct: 1141 ASILIRLALADSFASSCSVLALD----EPTTNLDRDNI-------ESLAFTLSRV----- 1184
Query: 1263 LDEPTTNLDIKNASDQKNFQLIVITHDEEFIENLTAIDRAYVVRIVRDHKGLSDIHLRSL 1322
I +FQLIVITHDE+F++ L+ Y R+ R G S I S+
Sbjct: 1185 ---------ISRHRRDADFQLIVITHDEDFVQLLSRGGPEYFYRLSRSESGDSMIVRHSI 1235
Query: 1323 LSSRLLSRN 1331
+R + N
Sbjct: 1236 YGTREMGPN 1244
>sp|Q9UTJ8|RAD50_SCHPO DNA repair protein rad50 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad50 PE=1 SV=3
Length = 1285
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 87/172 (50%), Gaps = 46/172 (26%)
Query: 1117 DLTKYHHTLENCVIKYHSQKMRSINRLIREYWTRIYQGNDIDYISIAADV-GTGSEKRRT 1175
DL KY L+ +++ HS KM INR++ E W + Y G DID I I +D G G+ RT
Sbjct: 1106 DLGKYAKALDVAIMQLHSMKMNEINRIVDELWKQTYCGTDIDTILIRSDSEGKGN---RT 1162
Query: 1176 YNYRVVQKKNGIEQDMRNRCSAGQRVLACLIIRLFISD---------------------- 1213
YNYRV K E DMR RCSAGQ+VLAC+IIRL +++
Sbjct: 1163 YNYRVCMVKGDAELDMRGRCSAGQKVLACIIIRLALAECLGVNCGILALDEPTTNLDEEN 1222
Query: 1214 -----------------QKNFQLIVITHDEEFIENLTAIDR--AYVVRIVRD 1246
Q NFQLIVITHDE+FI L D +Y R+ RD
Sbjct: 1223 ICSLAKNLSRIVEFRRKQANFQLIVITHDEQFI-RLVNSDAYCSYYYRVKRD 1273
>sp|O44199|RAD50_CAEEL DNA repair protein rad-50 OS=Caenorhabditis elegans GN=rad-50 PE=2
SV=1
Length = 1298
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 1 MALLDQLHIMGIRNFPADKNRV--VRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
MA +LHI GIR+ + + V + F P TLI G NG GKTT IE + F T + P
Sbjct: 1 MAKFLRLHIRGIRSVGDEDHDVHKIDFLSPCTLISGPNGTGKTTTIEALNFVTTGQMP-- 58
Query: 59 ASSGKNFVHDPRIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVV-R 117
+NF+H + +K AS F+ K E A+ +L T
Sbjct: 59 TQKKQNFIHSTDVARKTRVDASVTLEFID----VKGRECTAVRRLVVTSGTKAAALAEEH 114
Query: 118 SLLLSNKNGKDNCATRDTTISRKI--FATGVQKNLGCLQQESVLEMCNLIGVSKAILNNV 175
+L + +G N T+S K+ F T + K+LG V +A+ V
Sbjct: 115 TLAIKYPDGTVN------TLSSKVCDFNTALLKHLG---------------VPRAVFKYV 153
Query: 176 IFCHQENSSWPLDEGKKVKEIFDEIFDATKYNKALESIK 214
IFCHQE+S+WPL E K++K+ FD+IF TK+ KA E +K
Sbjct: 154 IFCHQEDSTWPLSEPKELKKRFDDIFQLTKFVKAQERMK 192
>sp|Q9UZC8|RAD50_PYRAB DNA double-strand break repair Rad50 ATPase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=rad50 PE=3 SV=1
Length = 880
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 233/565 (41%), Gaps = 143/565 (25%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDPRI 71
+ NF + + VVRF++ + LI+G+NG GK+++++ I L Y +
Sbjct: 8 VYNFRSHEETVVRFRKGINLIIGQNGSGKSSLLDAILVGL---YWSKKLRLRGL------ 58
Query: 72 GKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDNCA 131
KKDE RIG K T +++ EN+D+ V+
Sbjct: 59 -KKDEFR-----------RIGGKGGT----RIEIKFENDDSKYVL--------------- 87
Query: 132 TRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILN-----NVIFCHQENSSWP 186
RD SR + VQ+N G + S M ++ + IL N I+ Q
Sbjct: 88 FRD--FSRNVAYLKVQEN-GKWRHASEPSMESVSSYIERILPYNVFLNAIYIRQGQIDAI 144
Query: 187 LDEGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATLNYKKEADSKKQ 246
L+ + ++ EI + K A E++K IK + + +SKK
Sbjct: 145 LESDETRDKVVREILNLDKLESAYENLK-----------RIKTNINLLI------ESKKS 187
Query: 247 LIYNNTQKRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQES 306
I NIEE +K NE +LT+K ++ +S++ + E + ++E+
Sbjct: 188 FIART-----------ENIEELIKA-NED--ELTKKLSEINEISSKLPPIRGELEKVREN 233
Query: 307 CNELESSIKQLFSGDKAELQSKLNLFKINLDEKCSELENQERLKSQYIQEEKQSHTHINE 366
ELE SIK S K +++ KL K L+EK ++E + I+E+K + + E
Sbjct: 234 VKELE-SIKGKISELKIQVE-KLKGRKKGLEEKIVQIE-------RSIEEKKAKISELEE 284
Query: 367 AQMKLGKLERDEETHKKLN---DTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQT 423
+ KL+ E+ ++KL D ++KL L L
Sbjct: 285 IVKDIPKLQEKEKEYRKLKGFRDEYESKLRRLEKELS----------------------- 321
Query: 424 TIDKYLSDIKILERTFSDNENTKQ-AEINALIVEKVELESKIKSFKQQIEGNKKDLTNVI 482
K+ S++K +E + E K+ AE E+ K+ ++++E +L +
Sbjct: 322 ---KWESELKAIEEVIKEGEKKKERAE---------EIREKLSEIEKRLE----ELKPYV 365
Query: 483 TQINEVNQSQSTLQVLQTKLNRVNSEIDQLSKSLDPDQLKNEIEAWIRQRNELEDELCVI 542
++ + Q Q ++ L+ +L K L P ++ ++E+ ++R E+E+ + I
Sbjct: 366 EELEDAKQVQKQIERLKARL-----------KGLSPGEVIEKLESLEKERTEIEEAIKEI 414
Query: 543 DAEISIL-QAQNITLAEIKSLKNRK 566
I + Q +N + I+ L+ K
Sbjct: 415 TTRIGQMEQEKNERMKAIEELRKAK 439
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 235/530 (44%), Gaps = 81/530 (15%)
Query: 421 SQTTIDKYLSDIKILERTFSDNENTKQAE--INALIVEKVELESKIKSFKQQIEGNKKDL 478
S T DK + +I L++ S EN K+ + IN LI K ++ ++ ++ I+ N+ +L
Sbjct: 147 SDETRDKVVREILNLDKLESAYENLKRIKTNINLLIESKKSFIARTENIEELIKANEDEL 206
Query: 479 TNVITQINEVNQSQSTLQVLQTKLNRVNSEIDQL-SKSLDPDQLKNEIEAWIRQRNELED 537
T +++INE++ S L ++ +L +V + +L S +LK ++E ++ LE+
Sbjct: 207 TKKLSEINEIS---SKLPPIRGELEKVRENVKELESIKGKISELKIQVEKLKGRKKGLEE 263
Query: 538 ELCVIDAEISILQAQNITLAEIKSLKNRKESKLADINLLKERHDRAFHLLFDMIPEENFK 597
++ I+ I +A+ L EI + DI L+E+ ++ + L E K
Sbjct: 264 KIVQIERSIEEKKAKISELEEI----------VKDIPKLQEK-EKEYRKLKGFRDEYESK 312
Query: 598 -NSLDKALSSITFDINRIQEDINAKEK---HLYTLEANVSNSSKTLRDQKRTLAELMDRM 653
L+K LS ++ I+E I EK + +S K L + K + EL D
Sbjct: 313 LRRLEKELSKWESELKAIEEVIKEGEKKKERAEEIREKLSEIEKRLEELKPYVEELED-- 370
Query: 654 ELVLGSKPFEDELDRVTLELKR-------------EQEEVSMMTSTQYLFNSYIGKLEE- 699
+K + +++R+ LK E+E + + + + + IG++E+
Sbjct: 371 -----AKQVQKQIERLKARLKGLSPGEVIEKLESLEKERTEIEEAIKEI-TTRIGQMEQE 424
Query: 700 -NE------------PRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLC 746
NE +CP+C R ++ L+ + +IK+I E+ +L
Sbjct: 425 KNERMKAIEELRKAKGKCPVCGRELTEEHK-KELMERYTLEIKKIEEELKRTTEEERKLR 483
Query: 747 KQQRSLQELKPVYENIMKLQDTDIPSLRSKLI-----ELEENVIETKG---ELKKLKTAL 798
R L E+K ++M+ I L SKL ELE+ E +G E KLK L
Sbjct: 484 VNLRKL-EIKLREFSVMRDIAEQIKELESKLKGFNLEELEQKEREFEGLNEEFNKLKGEL 542
Query: 799 ETPKTKEKTALSLQGDLTLLDQNIR----ELNTLQRELERQESKISGMRSTGVDLDQV-- 852
+ K +L+G L+++ +R EL L R+L +E + + + ++
Sbjct: 543 LGLERDLKRIKALEGRRKLIEEKVRKAKEELENLHRQL--RELGFESVEELNLRIQELEE 600
Query: 853 ----LAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQ 898
+ K+ ++EL ++K+E +T L+ E L ++ N+I K+
Sbjct: 601 FHDKYVEAKKSESELRELKNKLEKEKTELDQAFEMLADVE---NEIEEKE 647
>sp|P62134|RAD50_METMP DNA double-strand break repair Rad50 ATPase OS=Methanococcus
maripaludis (strain S2 / LL) GN=rad50 PE=3 SV=1
Length = 993
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 55/227 (24%)
Query: 10 MGIRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQGASSGKNFVHDP 69
+ + NF + +N + F + +T I+G+NG GK++I + + FAL A G NF
Sbjct: 6 IKMENFRSHRNTSINFSKGITSIIGQNGSGKSSIFQAMNFALF------APRGNNF---- 55
Query: 70 RIGKKDEASASSGKNFVHDPRIGKKDETHAIVKLQCTCENNDTVCVVRSLLLSNKNGKDN 129
RI + A+S F + T+ + + + + +D + V NGK N
Sbjct: 56 RIENLMQQGAAS---FSVELEFEMMGNTYLVKRKRFQHKTDDKLYV---------NGKLN 103
Query: 130 CATRDTTISRKIFATGVQKNLGCLQQESVLEMCNLIGVSKAILNNVIFCHQ-ENSSWPLD 188
A + I++KI E +LE+ N ++ +N I+ Q E ++
Sbjct: 104 -AESASEINKKI--------------EEILEIDN------SVFSNAIYIKQGEIANLIQM 142
Query: 189 EGKKVKEIFDEIFDATKYNKALESIKIQRDRLRKEIPEIKAHYQATL 235
+ KE+ ++ KY KA E + I +K Y+ TL
Sbjct: 143 TPRDRKEVIGKLLGIEKYEKASEKMNI-----------VKKSYEETL 178
>sp|Q97WH0|RAD50_SULSO DNA double-strand break repair Rad50 ATPase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=rad50 PE=3 SV=1
Length = 864
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 1249 ALAETFSRNCGIFALDEPTTNLD---------IKNASDQKNFQLIVITHDEEFIENLTAI 1299
A+A+ N F LDEPT +LD I A+ + Q+IV+THDEE ++ A
Sbjct: 789 AIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQIIVVTHDEEVVQ---AA 845
Query: 1300 DRAYVVRI 1307
D YV+R+
Sbjct: 846 D--YVIRV 851
Score = 40.8 bits (94), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 14 NFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQG 58
NF + ++ ++F + +IVG+NG GK++II+ I F+L + +G
Sbjct: 10 NFLSHEHSEIQFMGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRG 54
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 836 ESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIH 895
ESKI + + V LD++ K+KK L + +++ Q + + E++ +Q +N +
Sbjct: 583 ESKILDLENKRVKLDEM----KKKKGILEDYIRQVKLLQEEVKNLREEVNIIQFDENRYN 638
Query: 896 SKQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGRKVAPIETQLNLAQSELDALKK 955
+ ++ LK E+RK +EG + ++EE+ ++A E QL + ++A+ K
Sbjct: 639 ELKTSLDAYNLSLKEKENRKSRIEGELESLEKDIEEISNRIANYELQLKDREKIINAINK 698
Query: 956 EHKKKLNEEGAKIQDY----TKQLEE-------------VKRIKLEILNYTKRG 992
K + K+Q Y TKQL E +K +++EI+ T RG
Sbjct: 699 LEKIRSALGERKLQSYIIMTTKQLIENNLNDIISKFDLSIKNVEMEIMPKTGRG 752
>sp|O33600|RAD50_SULAC DNA double-strand break repair Rad50 ATPase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929
/ NBRC 15157 / NCIMB 11770) GN=rad50 PE=3 SV=1
Length = 886
Score = 41.2 bits (95), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFAL 51
++NF + ++ V+F+ + +I+G NG GK++II+ I F L
Sbjct: 8 LQNFLSHEDTTVKFEGSINVIIGNNGAGKSSIIDGILFGL 47
>sp|Q1D823|AGLZ_MYXXD Adventurous-gliding motility protein Z OS=Myxococcus xanthus
(strain DK 1622) GN=aglZ PE=1 SV=1
Length = 1395
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 158/341 (46%), Gaps = 57/341 (16%)
Query: 254 KRDQSFEELHNIEESMKPINEKLVQLTEKERNMSVMSTQYQTKKTERDMIQESCNELESS 313
+RDQ F EL ++ + E+L Q TE+ER+ +V + + + E E + ++
Sbjct: 395 ERDQRFAELDG---EIQALQERLQQ-TEQERDTTVRGLEARAARAE-----EHGTQADAE 445
Query: 314 IKQLFSGDKAELQSKLNLFKINLDEKCSE-LENQERLKSQYIQEEKQSHTHINEAQMKLG 372
I +L + ++ L++KL+ +L+ + + +++L+ +E + I E KLG
Sbjct: 446 IHRL-NAERDALEAKLSQQVADLEADLARTMGERDQLRLDKDAQEAELTQRIEERDAKLG 504
Query: 373 KLERDEETHKKLNDTLKTKLNNLADTLCLDTTAKSQYTPEEGEGLIKMSQTTIDKYLSDI 432
LER+ L++T+ A++++T E I+ I + ++
Sbjct: 505 TLERE------LSETI----------------ARNEHTEAELNANIQQQLERIGELEGEV 542
Query: 433 KILERTFSDNENTKQAEINALIVEKVELES----KIKSFKQQIEGNKKDLTNVITQINEV 488
+ ++ D EN AE+ AL K ELE+ ++++ Q + + DL+ Q+ E+
Sbjct: 543 EAVKTHLEDRENELTAELQALGQAKDELETDLNDRLQALSQAKDALEADLSR---QLEEL 599
Query: 489 NQSQSTLQV-LQTKLNRVNSEIDQLSKSLDPDQLKNE--------IEAWIRQR----NEL 535
+++ L+ L ++ + S++++ + LD Q E +E + QR L
Sbjct: 600 RSAKAELEADLTGQIQALTSQLEETQRQLDDSQRTGEQLSARVAQLEDTVSQRESTIESL 659
Query: 536 EDELCVIDAEIS----ILQAQNITLAEIKSLKNRKESKLAD 572
+ ++ D IS L+A + TLA+ + + E +LAD
Sbjct: 660 QGDVAARDQRISELSGDLEATSQTLAQTQQTLAQTEQQLAD 700
>sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=5
Length = 1939
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 82/148 (55%), Gaps = 14/148 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + +++++ + SL ++LE+ V +
Sbjct: 976 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQVEEDKVNSLSKSKVKLEQQVDD 1035
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++I +L L+ +L+++E I
Sbjct: 1036 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDLENDKLQLEEKLKKKEFDI 1089
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELNTFR 867
+ +++ ++ +QVLA Q +KK + N R
Sbjct: 1090 N-QQNSKIEDEQVLALQLQKKLKENQAR 1116
>sp|C5DJH6|SP110_LACTC Spindle pole body component 110 OS=Lachancea thermotolerans (strain
ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=SPC110 PE=3 SV=1
Length = 838
Score = 38.1 bits (87), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 130/567 (22%), Positives = 242/567 (42%), Gaps = 99/567 (17%)
Query: 582 RAFHLLFDMIPE------ENFKNSLDKALSSITFDINRIQEDINAKEKHLYTLEANVSNS 635
R+ L FD E S +K + S+ + QE + +K + +LE + NS
Sbjct: 178 RSLQLKFDQSEHKDQADLEQDARSNEKEMRSLQKKLQEYQEQVTQSKKLVESLENKLGNS 237
Query: 636 ---SKTLRDQ----KRTLAELMDRMELVLGSKPFEDELDRVTLELKREQEEVSMMTSTQY 688
SK +++Q L E +D++E L +K E E++R E+ + +
Sbjct: 238 ASGSKEIKEQFEHKSSLLQERIDKLESELAAKDKELEINR---------NEIKNLQNDLQ 288
Query: 689 LFNSYIGKLEENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQ 748
N L + + L TR E + L N+LK+ ++E + + L K+
Sbjct: 289 KANHDSSSLADQK----LQTRSKE----IENLNNRLKSAVRE--------REAAEHLLKE 332
Query: 749 -QRSLQELKPVY-----ENIMKLQDTDIPSLRSKLIELEENVIETKGELKKLKTALETPK 802
Q +L+ L+ E+ KL D + +S+ + L+E + E + ++L+ +
Sbjct: 333 SQNALRSLRAELSTLRQESDRKLDDLSVAKEKSERV-LKERLEERTSQSERLQ---QRAN 388
Query: 803 TKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNE 862
+ E+ A L L L DQ I+ L REL++ +I + + G D +++ AQ + +
Sbjct: 389 SLEQNAAELSSRLQLRDQRIKALEDEARELQKMNQRIQDL-NDGKDSEKLQAQNQ----K 443
Query: 863 LNTFRSKIESGQTRLNSHNEKLQSLQKQKNDIHSKQLTVQGGAGMLKSLEDRKCELEGMD 922
L+ RS+IE R+ + E+L+ + ND K++ Q RK LE
Sbjct: 444 LDGLRSEIE----RIKNEKEELE----RDNDKLKKRIVAQATKSPALKANSRKS-LEK-- 492
Query: 923 SVYQTELEELGRKVAPIETQLNLAQSELDALKKEHKK-----KLNEEGAKIQDYT--KQL 975
E E+L +V +E +L +++ L+ L+ +++ KL EGA+ + + L
Sbjct: 493 ---DAEAEKLRSRVRELEQELRVSKDALNKLRHNYRRDTDELKLQLEGAETDQVSAKRSL 549
Query: 976 E-EVKRIKLEILNYTKRGTLTQLAALRESVQKLNQRKEDIIAKRGVC-----------ER 1023
E E+ R+K EI + + ++A + L + E + + G ++
Sbjct: 550 EKEIDRLKFEI-DSLRESRKDEIAIMENRFNLLRRENEQLSGQGGSQLASLQKSLTEKQK 608
Query: 1024 TINEINQSIANQSLEEIDLKNNLTLLEKKEAVAKLNEELKLS---EIMISDLTKYHHTLE 1080
INE+ Q ++ +++ + L L ++ E+ K E KLS E + + KY
Sbjct: 609 EINELVQRCSDNTMDRLKLNRELAKAQEAESEGK-REASKLSARLEFITKEFVKYKEA-- 665
Query: 1081 NCVIKYHSQKMRSINRLIREYWTRIYQ 1107
+Q + + E W+ YQ
Sbjct: 666 ------KTQGGEAGADRLNEKWSEKYQ 686
>sp|Q9UKX2|MYH2_HUMAN Myosin-2 OS=Homo sapiens GN=MYH2 PE=1 SV=1
Length = 1941
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L I+LE+ V +
Sbjct: 980 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDD 1039
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++I ++ L +L+++E +I
Sbjct: 1040 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESIMDIENEKQQLDEKLKKKEFEI 1093
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q L Q +KK
Sbjct: 1094 SNLQSK-IEDEQALGIQLQKK 1113
>sp|P12882|MYH1_HUMAN Myosin-1 OS=Homo sapiens GN=MYH1 PE=1 SV=3
Length = 1939
Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L I+LE+ V +
Sbjct: 978 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDD 1037
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1038 LEGSLEQEKKIRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1091
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
SG++S ++ +Q L Q +KK
Sbjct: 1092 SGLQSK-IEDEQALGMQLQKK 1111
>sp|Q8TXI4|RAD50_METKA DNA double-strand break repair Rad50 ATPase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=rad50 PE=3 SV=1
Length = 876
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 12 IRNFPADKNRVVRFQRPLTLIVGENGCGKTTIIECIKFALTNEYPQ 57
I N + + + F+ + ++VG NG GKTT++E I AL +P+
Sbjct: 7 IENLRSHSSTEIEFREGINVLVGPNGAGKTTVLEAITLAL---FPR 49
>sp|P02563|MYH6_RAT Myosin-6 OS=Rattus norvegicus GN=Myh6 PE=2 SV=2
Length = 1938
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 975 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDD 1034
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++I +L L+ +L+++E I
Sbjct: 1035 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDLENDKLQLEEKLKKKEFDI 1088
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELNTFR 867
S +++ ++ +Q LA Q +KK + N R
Sbjct: 1089 S-QQNSKIEDEQALALQLQKKLKENQAR 1115
>sp|Q02566|MYH6_MOUSE Myosin-6 OS=Mus musculus GN=Myh6 PE=1 SV=2
Length = 1938
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 976 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDD 1035
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++I +L L+ +L+++E I
Sbjct: 1036 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDLENDKLQLEEKLKKKEFDI 1089
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELNTFR 867
S +++ ++ +Q LA Q +KK + N R
Sbjct: 1090 S-QQNSKIEDEQALALQLQKKLKENQAR 1116
>sp|Q9TV63|MYH2_PIG Myosin-2 OS=Sus scrofa GN=MYH2 PE=2 SV=1
Length = 1939
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 978 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1037
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++I ++ L +L+++E +I
Sbjct: 1038 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESIMDIENEKQQLDEKLKKKEFEI 1091
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1092 SNLQSK-IEDEQALAIQLQKK 1111
>sp|Q076A7|MYH2_CANFA Myosin-2 OS=Canis familiaris GN=MYH2 PE=3 SV=1
Length = 1940
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L I+LE+ V +
Sbjct: 979 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDD 1038
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++I ++ L +L+++E ++
Sbjct: 1039 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESIMDIENEKQQLDEKLKKKEFEM 1092
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q L Q +KK
Sbjct: 1093 SNLQSK-IEDEQALGIQLQKK 1112
>sp|Q076A6|MYH1_CANFA Myosin-1 OS=Canis familiaris GN=MYH1 PE=3 SV=2
Length = 1939
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L I+LE+ V +
Sbjct: 978 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDD 1037
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1038 LEGSLEQEKKIRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1091
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1092 SNLQSK-IEDEQALAMQLQKK 1111
>sp|Q8BL66|EEA1_MOUSE Early endosome antigen 1 OS=Mus musculus GN=Eea1 PE=1 SV=2
Length = 1411
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 33/202 (16%)
Query: 721 VNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIEL 780
KL+ +++E+ + K + QL +QQR +E ++ ++LQ ++ L KL+E
Sbjct: 374 AQKLREELREVESTRQHLKVEVKQL-QQQREEKE-----QHGLQLQ-GEVSQLHCKLLET 426
Query: 781 EENVIETKGELKKLKT-ALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQ 835
E + E G LK+ + + E KE+ LQ L+ L++ ++E T LQ +LE+
Sbjct: 427 ERQLGEAHGRLKEQRQLSSEKLMEKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLEKS 486
Query: 836 E-----------SKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
+ S + +R DL+QVL Q +K ++ + ++ G+ E +
Sbjct: 487 KQQHQEQQALQQSATAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKGK-------ESV 539
Query: 885 QSLQKQKNDIHSKQLTVQGGAG 906
L+K++ D+++K +Q G G
Sbjct: 540 SLLEKEREDLYAK---IQAGEG 558
>sp|P13539|MYH6_MESAU Myosin-6 OS=Mesocricetus auratus GN=MYH6 PE=2 SV=2
Length = 1939
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 976 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDD 1035
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL + ++I +L L+ +L+++E I
Sbjct: 1036 LEGSLEQEKKVRMDLERAKRK------LEGDLNVTQESIMDLENDKLQLEEKLKKKEFDI 1089
Query: 840 SGMRSTGVDLDQVLAQQKEKKNELNTFR 867
S +++ ++ +Q LA Q +KK + N R
Sbjct: 1090 S-QQNSKIEDEQALALQLQKKLKENQAR 1116
>sp|Q15075|EEA1_HUMAN Early endosome antigen 1 OS=Homo sapiens GN=EEA1 PE=1 SV=2
Length = 1411
Score = 35.8 bits (81), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 721 VNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIEL 780
KLK ++ E+ + + K QL +QQR +E ++ ++LQ ++I L SKL+E
Sbjct: 374 TQKLKEELSEVETKYQHLKAEFKQL-QQQREEKE-----QHGLQLQ-SEINQLHSKLLET 426
Query: 781 EENVIETKGELKKLKT-ALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQ---- 835
E + E G LK+ + + E KE+ LQ L+ L++ ++E T EL+ Q
Sbjct: 427 ERQLGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKT 486
Query: 836 -----------ESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKL 884
+S + +R DL+QVL Q + KI++ + L E +
Sbjct: 487 KQQHQEQQALQQSTTAKLREAQNDLEQVLRQ-------IGDKDQKIQNLEALLQKSKENI 539
Query: 885 QSLQKQKNDIHSKQLTVQGGAG 906
L+K++ D+++K +Q G G
Sbjct: 540 SLLEKEREDLYAK---IQAGEG 558
>sp|Q9TV62|MYH4_PIG Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
Length = 1937
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ +I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 976 KVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1035
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1036 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1089
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1090 SNLQSK-IEDEQALAMQLQKK 1109
>sp|A2AL36|CNTRL_MOUSE Centriolin OS=Mus musculus GN=Cntrl PE=2 SV=2
Length = 2334
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 278 QLTEKERNMSVMSTQYQTKKTERDMIQESCNELESSIKQLFSGDKAELQSKLNLFKINLD 337
Q+T +++ ++V+ ++ ++ E ++Q+S + KA+LQ L L + +
Sbjct: 1591 QVTSQQQELAVLDSELGHRREELLLLQDS-----------LAQAKADLQEALTLGETEVA 1639
Query: 338 EKCSELENQERLKSQYIQEEKQSHTHINEAQMKLGKLERD-EETHKKLNDTL------KT 390
EKCS + + L + ++ + + HI+E + +L ++++ E+ K L L KT
Sbjct: 1640 EKCSHIREVKSLLEELSFQKGELNVHISEKKTQLALIQQEMEKEEKNLQVVLQQLSRHKT 1699
Query: 391 KLNNLADTLCLDTT 404
+L N+AD L L+T+
Sbjct: 1700 ELKNVADILQLETS 1713
>sp|Q9BE41|MYH2_BOVIN Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
Length = 1940
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 979 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1038
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++I ++ L +L+++E +I
Sbjct: 1039 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESIMDIENEKQQLDEKLKKKEFEI 1092
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q L Q +KK
Sbjct: 1093 SNLQSK-IEDEQALGIQLQKK 1112
>sp|Q8MJV0|MYH1_HORSE Myosin-1 OS=Equus caballus GN=MYH1 PE=2 SV=1
Length = 1938
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 977 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1036
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1037 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1090
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1091 SNLQSK-IEDEQALAMQLQKK 1110
>sp|Q9BE40|MYH1_BOVIN Myosin-1 OS=Bos taurus GN=MYH1 PE=2 SV=2
Length = 1938
Score = 35.0 bits (79), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 977 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1036
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1037 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1090
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1091 SNLQSK-IEDEQALAMQLQKK 1110
>sp|Q9TV61|MYH1_PIG Myosin-1 OS=Sus scrofa GN=MYH1 PE=2 SV=1
Length = 1939
Score = 35.0 bits (79), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 978 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1037
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1038 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1091
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1092 SNLQSK-IEDEQALAMQLQKK 1111
>sp|Q076A5|MYH4_CANFA Myosin-4 OS=Canis familiaris GN=MYH4 PE=3 SV=1
Length = 1939
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 978 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1037
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1038 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESTMDVENDKQQLDEKLKKKEFEM 1091
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1092 SNLQSK-IEDEQALAMQLQKK 1111
>sp|Q8MJU9|MYH7_HORSE Myosin-7 OS=Equus caballus GN=MYH7 PE=2 SV=1
Length = 1935
Score = 34.7 bits (78), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 29/165 (17%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE++V +
Sbjct: 974 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQHVDD 1033
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+G L KK++ LE K K L+GDL L ++I +L E ++Q+
Sbjct: 1034 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDL-----ENDKQQ------- 1075
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
LD+ L K+K ELN ++IE Q + +KL+ LQ
Sbjct: 1076 -----LDERL---KKKDFELNALNARIEDEQALGSQLQKKLKELQ 1112
>sp|Q9BE39|MYH7_BOVIN Myosin-7 OS=Bos taurus GN=MYH7 PE=2 SV=1
Length = 1935
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 29/165 (17%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE++V +
Sbjct: 974 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQHVDD 1033
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+G L KK++ LE K K L+GDL L ++I +L E ++Q+
Sbjct: 1034 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDL-----ENDKQQ------- 1075
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
LD+ L K+K ELN ++IE Q + +KL+ LQ
Sbjct: 1076 -----LDERL---KKKDFELNALNARIEDEQALGSQLQKKLKELQ 1112
>sp|Q5SX39|MYH4_MOUSE Myosin-4 OS=Mus musculus GN=Myh4 PE=1 SV=1
Length = 1939
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ +I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 978 KVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1037
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1038 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1091
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q L Q +KK
Sbjct: 1092 SNLQSK-IEDEQALGMQLQKK 1111
>sp|Q5SX40|MYH1_MOUSE Myosin-1 OS=Mus musculus GN=Myh1 PE=1 SV=1
Length = 1942
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L I+LE+ V +
Sbjct: 981 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDD 1040
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1041 LEGSLEQEKKIRMDLERAKRK------LEGDLKLAQESTMDVENDKQQLDEKLKKKEFEM 1094
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q L Q +KK
Sbjct: 1095 SNLQSK-IEDEQALGMQLQKK 1114
>sp|P79293|MYH7_PIG Myosin-7 OS=Sus scrofa GN=MYH7 PE=2 SV=2
Length = 1935
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 29/165 (17%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE++V +
Sbjct: 974 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQHVDD 1033
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+G L KK++ LE K K L+GDL L ++I +L E ++Q+
Sbjct: 1034 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDL-----ENDKQQ------- 1075
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
LD+ L K+K ELN ++IE Q + +KL+ LQ
Sbjct: 1076 -----LDERL---KKKDFELNALNARIEDEQALGSQLQKKLKELQ 1112
>sp|Q7Z7A1|CNTRL_HUMAN Centriolin OS=Homo sapiens GN=CNTRL PE=1 SV=2
Length = 2325
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 146/316 (46%), Gaps = 41/316 (12%)
Query: 768 TDIPSLRSKLIELEENVIETKGELKKLKTALETPKTKE--KTAL--SLQGDLTLLDQNIR 823
T + L ++ + E+ ++ E K+L+ A++ K E K L L G L L+++ +
Sbjct: 451 TRLSELHDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRLQLVNKLRQ 510
Query: 824 ELNTLQRELERQESKISGMRSTGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEK 883
E L+ ++E+Q+ +I+G + DL + K + + +++ + +L+ N++
Sbjct: 511 EALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSKDPKHSHMKAQKSGKEQQLDIMNKQ 570
Query: 884 LQSLQKQKNDIHS---------KQLTVQGGAGMLKSLEDRKCELEGMDSVYQTELEELGR 934
Q L+ + ++I S K L Q G + + E K +LEG+ S Q E LG
Sbjct: 571 YQQLESRLDEILSRIAKETEEIKDLEEQLTEGQIAANEALKKDLEGVISGLQ---EYLG- 626
Query: 935 KVAPIETQLNLAQSELDALKKEHKKKLNEEGAKIQDYTKQLEEV--KRIKLEILNYTKRG 992
I+ Q AQ+E L+ E + L ++L EV +R +LEI+
Sbjct: 627 ---TIKGQATQAQNECRKLRDEKETLL-----------QRLTEVEQERDQLEIVAMDAEN 672
Query: 993 TLTQLAALRESVQK-------LNQRKEDIIAKRGVCERTINEINQSIANQSLEEIDLKNN 1045
+LA L ++Q+ L Q + D+ A E +N + + ANQ EE++
Sbjct: 673 MRKELAELESALQEQHEVNASLQQTQGDLSAYEAELEARLN-LRDAEANQLKEELEKVTR 731
Query: 1046 LTLLEKKEAVAKLNEE 1061
LT LE+ A+L +E
Sbjct: 732 LTQLEQSALQAELEKE 747
>sp|P13540|MYH7_MESAU Myosin-7 OS=Mesocricetus auratus GN=MYH7 PE=2 SV=2
Length = 1934
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 973 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDD 1032
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+G L KK++ LE K K L+GDL L ++I +L E ++Q+
Sbjct: 1033 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDL-----ENDKQQ------- 1074
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
LD+ L K+K ELN ++IE Q + +KL+ LQ
Sbjct: 1075 -----LDEKL---KKKDFELNALNARIEDEQALGSQLQKKLKELQ 1111
>sp|P12883|MYH7_HUMAN Myosin-7 OS=Homo sapiens GN=MYH7 PE=1 SV=5
Length = 1935
Score = 34.3 bits (77), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 974 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDD 1033
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+G L KK++ LE K K L+GDL L ++I +L E ++Q+
Sbjct: 1034 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDL-----ENDKQQ------- 1075
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
LD+ L K+K ELN ++IE Q + +KL+ LQ
Sbjct: 1076 -----LDERL---KKKDFELNALNARIEDEQALGSQLQKKLKELQ 1112
>sp|P29616|MYSC_CHICK Myosin heavy chain, cardiac muscle isoform (Fragment) OS=Gallus
gallus PE=1 SV=1
Length = 1102
Score = 34.3 bits (77), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 639 LRDQKRTLAELMDRMELVLGSK-PFEDELDRVTLELKREQEEVSMMTSTQYLFNSYIGKL 697
L+ ++ TLA+ +R +L++ SK E ++ +T ++ E+E S +TS + +L
Sbjct: 57 LQAEQDTLADAEERCDLLIKSKIQLEAKVKELTERVEDEEEMNSELTSKKRKLEDECSEL 116
Query: 698 EENEPRCPLCTRFFESDYSVPGLVNKLKTKIKEIPEQTNNKKTHIDQLCKQQRSLQELKP 757
+++ + E + + K+K + E+ +I +L K+++SLQE
Sbjct: 117 KKDIDDLEITLAKVEKEKHAT------ENKVKNLTEEMATLDENISKLTKEKKSLQEAHQ 170
Query: 758 VYENIMKLQDTDIPSLRSKLIELEENVIETKGEL---KKLKTALETPKTKEKTALSLQGD 814
+ ++ ++ + +L ++LE+ V + +G L KK++ LE K K L+GD
Sbjct: 171 QVLDDLQAEEDKVNTLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRK------LEGD 224
Query: 815 LTLLDQNIREL 825
L L +++ +L
Sbjct: 225 LKLTQESVMDL 235
>sp|Q28641|MYH4_RABIT Myosin-4 OS=Oryctolagus cuniculus GN=MYH4 PE=2 SV=1
Length = 1938
Score = 34.3 bits (77), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 977 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1036
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KK++ LE K K L+GDL L ++ ++ L +L+++E ++
Sbjct: 1037 LEGSLEQEKKIRMDLERAKRK------LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEM 1090
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q LA Q +KK
Sbjct: 1091 SNLQSK-IEDEQALAMQLQKK 1110
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult OS=Gallus gallus PE=1 SV=4
Length = 1939
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + +++++ + +L +LE+ V +
Sbjct: 977 KVKNLTEEMAVLDETIAKLTKEKKALQEAHQQTLDDLQVEEDKVNTLTKAKTKLEQQVDD 1036
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L +I +L L +L++++ +I
Sbjct: 1037 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAHDSIMDLENDKQQLDEKLKKKDFEI 1090
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
S ++S ++ +Q L Q +KK
Sbjct: 1091 SQIQSK-IEDEQALGMQLQKK 1110
>sp|P49824|MYH7_CANFA Myosin-7 OS=Canis familiaris GN=MYH7 PE=1 SV=3
Length = 1935
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L ++LE+ V +
Sbjct: 974 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDD 1033
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNTLQRELERQESKISGMR 843
+G L KK++ LE K K L+GDL L ++I +L E ++Q+
Sbjct: 1034 LEGSLEQEKKVRMDLERAKRK------LEGDLKLTQESIMDL-----ENDKQQ------- 1075
Query: 844 STGVDLDQVLAQQKEKKNELNTFRSKIESGQTRLNSHNEKLQSLQ 888
LD+ L K+K ELN ++IE Q + +KL+ LQ
Sbjct: 1076 -----LDERL---KKKDFELNALNARIEDEQALGSQLQKKLKELQ 1112
>sp|Q8MJV1|MYH2_HORSE Myosin-2 OS=Equus caballus GN=MYH2 PE=2 SV=1
Length = 1937
Score = 33.9 bits (76), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 727 KIKEIPEQTNNKKTHIDQLCKQQRSLQELKPVYENIMKLQDTDIPSLRSKLIELEENVIE 786
K+K + E+ I +L K++++LQE + ++ ++ + +L +LE+ V +
Sbjct: 976 KVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDD 1035
Query: 787 TKGEL---KKLKTALETPKTKEKTALSLQGDLTLLDQNIRELNT----LQRELERQESKI 839
+G L KKL+ LE K K L+GDL L ++I ++ L +L+++E +I
Sbjct: 1036 LEGSLEQEKKLRMDLERAKRK------LEGDLKLAQESIMDIENEKQQLDEKLKKKEFEI 1089
Query: 840 SGMRSTGVDLDQVLAQQKEKK 860
++S ++ +Q L Q +KK
Sbjct: 1090 GNLQSK-IEDEQALGIQLQKK 1109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,838,505
Number of Sequences: 539616
Number of extensions: 21929945
Number of successful extensions: 102868
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 3270
Number of HSP's that attempted gapping in prelim test: 83987
Number of HSP's gapped (non-prelim): 12584
length of query: 1491
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1360
effective length of database: 120,879,763
effective search space: 164396477680
effective search space used: 164396477680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)