Query psy9514
Match_columns 611
No_of_seqs 400 out of 2140
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:34:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9514.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9514hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 100.0 1.1E-41 3.7E-46 357.7 20.7 228 255-595 1-228 (318)
2 3b0p_A TRNA-dihydrouridine syn 100.0 4.2E-40 1.4E-44 350.0 24.3 240 256-598 1-243 (350)
3 3gr7_A NADPH dehydrogenase; fl 100.0 3.3E-37 1.1E-41 326.4 22.1 295 246-610 5-340 (340)
4 2r14_A Morphinone reductase; H 100.0 5.5E-37 1.9E-41 328.8 18.6 292 246-604 11-352 (377)
5 1z41_A YQJM, probable NADH-dep 100.0 1.1E-36 3.7E-41 322.3 20.3 285 246-602 5-329 (338)
6 1icp_A OPR1, 12-oxophytodienoa 100.0 8.2E-37 2.8E-41 327.4 14.2 292 246-605 16-355 (376)
7 2hsa_B 12-oxophytodienoate red 100.0 2.3E-36 7.9E-41 326.3 17.4 299 246-604 18-372 (402)
8 1vyr_A Pentaerythritol tetrani 100.0 2.2E-35 7.4E-40 315.2 22.1 289 246-602 5-345 (364)
9 3kru_A NADH:flavin oxidoreduct 100.0 3E-35 1E-39 311.4 19.4 279 246-594 4-321 (343)
10 3l5a_A NADH/flavin oxidoreduct 100.0 1.7E-35 5.8E-40 320.9 17.7 294 246-604 27-370 (419)
11 2gou_A Oxidoreductase, FMN-bin 100.0 5.8E-35 2E-39 312.0 20.7 287 246-601 5-343 (365)
12 3k30_A Histamine dehydrogenase 100.0 6E-35 2.1E-39 335.5 19.1 295 246-605 14-349 (690)
13 3hgj_A Chromate reductase; TIM 100.0 2.8E-34 9.6E-39 305.1 22.6 297 246-602 4-340 (349)
14 3l5l_A Xenobiotic reductase A; 100.0 4.7E-34 1.6E-38 304.8 18.8 295 246-598 4-343 (363)
15 4ab4_A Xenobiotic reductase B; 100.0 6.6E-34 2.3E-38 302.9 19.2 286 246-601 4-329 (362)
16 3gka_A N-ethylmaleimide reduct 100.0 7.2E-34 2.5E-38 302.5 19.1 286 246-601 12-337 (361)
17 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.9E-33 6.6E-38 322.0 21.5 292 246-604 5-334 (671)
18 1o94_A Tmadh, trimethylamine d 100.0 2.3E-33 8E-38 324.3 18.0 297 246-604 9-345 (729)
19 3tjl_A NADPH dehydrogenase; OL 100.0 1.3E-33 4.4E-38 303.8 9.8 293 246-601 14-367 (407)
20 3aty_A Tcoye, prostaglandin F2 100.0 1.9E-32 6.4E-37 293.7 18.7 294 246-604 7-360 (379)
21 4a3u_A NCR, NADH\:flavin oxido 100.0 1.6E-30 5.3E-35 277.1 16.2 292 246-600 4-335 (358)
22 4gbu_A NADPH dehydrogenase 1; 100.0 6.5E-29 2.2E-33 268.3 17.0 294 246-600 17-368 (400)
23 1jub_A Dihydroorotate dehydrog 100.0 5.6E-27 1.9E-31 244.6 25.2 271 249-597 3-289 (311)
24 2e6f_A Dihydroorotate dehydrog 99.9 2E-26 6.8E-31 240.7 25.5 271 249-597 5-291 (314)
25 4ef8_A Dihydroorotate dehydrog 99.9 1.4E-26 4.6E-31 245.7 23.0 271 249-596 38-323 (354)
26 1f76_A Dihydroorotate dehydrog 99.9 1.4E-26 4.8E-31 244.3 22.2 268 248-596 45-335 (336)
27 3oix_A Putative dihydroorotate 99.9 9.5E-26 3.3E-30 238.6 21.7 268 249-596 39-321 (345)
28 1ep3_A Dihydroorotate dehydrog 99.9 2.9E-26 1E-30 238.4 17.6 264 249-597 8-287 (311)
29 1tv5_A Dhodehase, dihydroorota 99.9 7.1E-25 2.4E-29 238.6 23.2 279 246-597 80-420 (443)
30 3zwt_A Dihydroorotate dehydrog 99.9 5.6E-24 1.9E-28 227.0 23.8 276 249-596 51-344 (367)
31 3i65_A Dihydroorotate dehydrog 99.9 1.5E-23 5E-28 225.6 22.4 277 246-596 82-391 (415)
32 1gte_A Dihydropyrimidine dehyd 99.9 1.5E-22 5.3E-27 241.9 26.7 283 250-596 535-833 (1025)
33 3tjx_A Dihydroorotate dehydrog 99.8 3.3E-19 1.1E-23 189.5 24.1 273 249-596 38-323 (354)
34 1p0k_A Isopentenyl-diphosphate 99.8 2.8E-19 9.6E-24 189.6 21.7 228 249-587 46-287 (349)
35 2nli_A Lactate oxidase; flavoe 99.8 1.4E-18 4.9E-23 185.5 19.9 235 249-585 71-318 (368)
36 2nzl_A Hydroxyacid oxidase 1; 99.7 2.1E-17 7.1E-22 177.8 18.9 243 249-586 85-342 (392)
37 1gox_A (S)-2-hydroxy-acid oxid 99.7 8E-17 2.8E-21 172.2 21.1 238 249-586 62-315 (370)
38 1kbi_A Cytochrome B2, L-LCR; f 99.7 2E-16 6.9E-21 175.4 22.6 231 249-587 180-439 (511)
39 1vcf_A Isopentenyl-diphosphate 99.7 8.2E-17 2.8E-21 169.6 15.5 236 249-587 49-292 (332)
40 2z6i_A Trans-2-enoyl-ACP reduc 99.7 4.6E-15 1.6E-19 156.2 21.6 205 255-604 9-221 (332)
41 3vkj_A Isopentenyl-diphosphate 99.6 1.4E-14 4.8E-19 154.5 17.8 241 250-585 51-301 (368)
42 1p4c_A L(+)-mandelate dehydrog 99.6 4.4E-14 1.5E-18 151.5 16.6 227 249-587 63-314 (380)
43 3sr7_A Isopentenyl-diphosphate 99.5 2.6E-13 9E-18 144.3 18.2 228 250-585 78-312 (365)
44 1ypf_A GMP reductase; GUAC, pu 99.5 5.1E-13 1.8E-17 140.9 18.8 199 250-585 38-244 (336)
45 1mzh_A Deoxyribose-phosphate a 99.5 3.2E-13 1.1E-17 134.8 14.5 146 371-595 64-215 (225)
46 2gjl_A Hypothetical protein PA 99.4 2E-11 6.7E-16 128.1 23.1 133 394-606 95-233 (328)
47 2y88_A Phosphoribosyl isomeras 99.4 1.1E-12 3.7E-17 131.3 12.8 154 369-595 75-240 (244)
48 3bo9_A Putative nitroalkan dio 99.4 1.9E-11 6.7E-16 128.3 22.1 191 254-588 22-213 (326)
49 2agk_A 1-(5-phosphoribosyl)-5- 99.4 6.8E-13 2.3E-17 135.2 10.6 201 321-595 36-254 (260)
50 2yzr_A Pyridoxal biosynthesis 99.4 4.3E-12 1.5E-16 131.6 15.4 174 394-588 36-281 (330)
51 2qr6_A IMP dehydrogenase/GMP r 99.4 1.3E-11 4.4E-16 132.7 19.4 157 422-588 140-314 (393)
52 3o07_A Pyridoxine biosynthesis 99.4 6.8E-12 2.3E-16 126.8 15.9 170 393-590 29-241 (291)
53 1eep_A Inosine 5'-monophosphat 99.4 1.2E-11 4E-16 133.5 17.6 150 370-590 143-295 (404)
54 1m9o_A Tristetraproline; Cys3H 99.3 2.8E-13 9.6E-18 112.6 2.9 64 72-138 10-75 (77)
55 3bw2_A 2-nitropropane dioxygen 99.3 8.2E-11 2.8E-15 125.4 22.6 228 258-590 10-247 (369)
56 3khj_A Inosine-5-monophosphate 99.3 1.1E-10 3.9E-15 124.1 19.5 132 394-593 116-249 (361)
57 1vzw_A Phosphoribosyl isomeras 99.2 4.4E-11 1.5E-15 119.8 13.2 154 370-595 77-237 (244)
58 1jvn_A Glutamine, bifunctional 99.2 2.9E-11 9.9E-16 135.6 12.5 175 394-595 359-541 (555)
59 3tdn_A FLR symmetric alpha-bet 99.2 3.4E-12 1.2E-16 128.4 3.1 154 370-596 81-245 (247)
60 3r2g_A Inosine 5'-monophosphat 99.2 3.6E-10 1.2E-14 119.9 17.8 201 251-588 35-236 (361)
61 3q58_A N-acetylmannosamine-6-p 99.2 6.6E-10 2.3E-14 111.1 17.6 177 379-592 34-221 (229)
62 3sgz_A Hydroxyacid oxidase 2; 99.1 1.1E-09 3.9E-14 115.6 19.0 237 249-586 60-307 (352)
63 1ka9_F Imidazole glycerol phos 99.1 4.4E-10 1.5E-14 112.8 13.4 152 371-595 78-240 (252)
64 3igs_A N-acetylmannosamine-6-p 99.1 1.9E-09 6.6E-14 107.9 17.6 176 380-592 35-221 (232)
65 2nv1_A Pyridoxal biosynthesis 99.1 8.4E-10 2.9E-14 114.7 14.3 173 394-595 40-256 (305)
66 1h5y_A HISF; histidine biosynt 99.1 9.5E-10 3.2E-14 109.4 14.1 153 371-595 80-242 (253)
67 1thf_D HISF protein; thermophI 99.1 6.7E-10 2.3E-14 111.6 12.9 152 371-595 77-239 (253)
68 1y0e_A Putative N-acetylmannos 99.1 3.1E-09 1.1E-13 104.7 16.6 196 368-593 6-216 (223)
69 1qo2_A Molecule: N-((5-phospho 99.0 6E-10 2.1E-14 111.5 10.6 127 415-595 101-238 (241)
70 4fo4_A Inosine 5'-monophosphat 99.0 8E-09 2.8E-13 109.9 19.1 129 394-590 119-250 (366)
71 2w6r_A Imidazole glycerol phos 99.0 9.9E-10 3.4E-14 111.2 10.3 153 370-595 76-244 (266)
72 3tdn_A FLR symmetric alpha-bet 99.0 1.9E-09 6.5E-14 108.3 10.6 103 441-596 22-124 (247)
73 1yxy_A Putative N-acetylmannos 98.9 7.8E-09 2.7E-13 102.8 14.5 178 382-589 37-223 (234)
74 3ffs_A Inosine-5-monophosphate 98.9 4.6E-08 1.6E-12 105.1 20.9 128 394-589 155-284 (400)
75 1jcn_A Inosine monophosphate d 98.9 1.2E-08 4E-13 113.4 14.5 129 394-589 266-396 (514)
76 2cqe_A KIAA1064 protein; CCCH 98.9 4.9E-10 1.7E-14 97.5 2.3 56 72-143 11-66 (98)
77 4fxs_A Inosine-5'-monophosphat 98.8 9.1E-09 3.1E-13 113.8 11.8 126 394-587 242-370 (496)
78 4avf_A Inosine-5'-monophosphat 98.8 3E-08 1E-12 109.5 14.1 140 379-588 227-369 (490)
79 1qo2_A Molecule: N-((5-phospho 98.7 1.7E-08 5.7E-13 100.9 8.9 99 441-593 13-115 (241)
80 2zbt_A Pyridoxal biosynthesis 98.7 2.6E-07 8.8E-12 95.3 17.8 169 394-586 40-244 (297)
81 2pgw_A Muconate cycloisomerase 98.7 3.1E-07 1E-11 98.2 18.4 148 369-594 137-285 (384)
82 2c6q_A GMP reductase 2; TIM ba 98.7 4.8E-07 1.7E-11 95.8 19.3 125 394-587 131-259 (351)
83 2qjg_A Putative aldolase MJ040 98.7 6.9E-07 2.4E-11 90.7 19.5 57 536-595 190-252 (273)
84 4adt_A Pyridoxine biosynthetic 98.6 1.3E-06 4.3E-11 90.4 19.5 164 394-588 40-246 (297)
85 1geq_A Tryptophan synthase alp 98.6 5.6E-07 1.9E-11 90.0 16.0 197 370-586 6-226 (248)
86 1vrd_A Inosine-5'-monophosphat 98.6 7E-07 2.4E-11 98.5 16.8 139 384-591 239-380 (494)
87 3f4w_A Putative hexulose 6 pho 98.6 9.6E-07 3.3E-11 86.1 15.3 179 379-593 11-200 (211)
88 1wv2_A Thiazole moeity, thiazo 98.6 6.9E-06 2.4E-10 82.6 21.5 137 379-588 85-226 (265)
89 3usb_A Inosine-5'-monophosphat 98.5 4.8E-07 1.6E-11 100.4 13.3 126 394-587 267-395 (511)
90 2rdx_A Mandelate racemase/muco 98.5 1.6E-06 5.4E-11 92.5 16.1 143 370-593 136-280 (379)
91 4gj1_A 1-(5-phosphoribosyl)-5- 98.5 1.3E-06 4.4E-11 87.9 14.3 200 320-594 28-238 (243)
92 1wa3_A 2-keto-3-deoxy-6-phosph 98.5 1.4E-06 4.9E-11 84.5 14.1 175 368-588 9-185 (205)
93 1xm3_A Thiazole biosynthesis p 98.5 6.1E-06 2.1E-10 83.9 19.3 49 537-588 167-215 (264)
94 1mdl_A Mandelate racemase; iso 98.5 1.7E-06 5.9E-11 91.4 15.7 148 369-593 134-283 (359)
95 3qja_A IGPS, indole-3-glycerol 98.5 3.5E-06 1.2E-10 86.1 17.3 147 428-594 103-256 (272)
96 2ovl_A Putative racemase; stru 98.4 2.3E-06 7.9E-11 91.0 14.5 139 379-594 146-286 (371)
97 1thf_D HISF protein; thermophI 98.4 6.9E-07 2.4E-11 89.4 9.5 89 455-596 31-119 (253)
98 1rd5_A Tryptophan synthase alp 98.4 5.2E-06 1.8E-10 83.9 15.8 194 371-585 20-235 (262)
99 3tsm_A IGPS, indole-3-glycerol 98.4 1.2E-05 4E-10 82.2 17.5 147 428-594 110-263 (272)
100 2nql_A AGR_PAT_674P, isomerase 98.4 4.4E-06 1.5E-10 89.3 15.1 147 369-594 153-302 (388)
101 2qdd_A Mandelate racemase/muco 98.3 5.3E-06 1.8E-10 88.4 15.5 145 369-594 135-281 (378)
102 1qop_A Tryptophan synthase alp 98.3 1.7E-05 5.7E-10 80.8 18.4 195 371-585 19-239 (268)
103 1ka9_F Imidazole glycerol phos 98.3 1.1E-06 3.8E-11 87.9 9.0 91 454-597 31-121 (252)
104 1rvk_A Isomerase/lactonizing e 98.3 1.4E-05 4.8E-10 85.1 17.9 145 378-593 148-295 (382)
105 2p8b_A Mandelate racemase/muco 98.3 7.8E-06 2.7E-10 86.7 15.8 148 368-593 130-280 (369)
106 2gl5_A Putative dehydratase pr 98.3 6.9E-06 2.4E-10 88.4 15.5 140 379-580 150-299 (410)
107 3ajx_A 3-hexulose-6-phosphate 98.3 1E-05 3.5E-10 78.4 14.4 179 376-593 8-199 (207)
108 3eez_A Putative mandelate race 98.3 9.7E-06 3.3E-10 86.5 15.4 146 368-594 134-281 (378)
109 2hzg_A Mandelate racemase/muco 98.3 1.8E-05 6E-10 85.0 17.2 145 377-593 143-290 (401)
110 1nu5_A Chloromuconate cycloiso 98.3 2.3E-05 7.8E-10 83.1 17.7 147 371-593 134-282 (370)
111 2v82_A 2-dehydro-3-deoxy-6-pho 98.2 1.3E-05 4.4E-10 78.2 14.0 173 368-586 6-182 (212)
112 3vnd_A TSA, tryptophan synthas 98.2 1.2E-05 4.1E-10 81.9 14.0 194 371-584 20-239 (267)
113 2d9n_A Cleavage and polyadenyl 98.2 5.9E-07 2E-11 74.5 3.4 54 72-137 8-61 (77)
114 2ps2_A Putative mandelate race 98.2 2.8E-05 9.7E-10 82.5 16.5 145 368-593 135-282 (371)
115 1h5y_A HISF; histidine biosynt 98.2 4.3E-06 1.5E-10 82.8 9.4 89 455-596 34-122 (253)
116 2poz_A Putative dehydratase; o 98.2 1.1E-05 3.9E-10 86.3 13.4 142 377-580 135-280 (392)
117 1rpx_A Protein (ribulose-phosp 98.2 4.4E-05 1.5E-09 75.4 16.6 195 369-593 11-220 (230)
118 3nav_A Tryptophan synthase alp 98.1 1.6E-05 5.4E-10 81.2 13.1 192 379-585 32-242 (271)
119 2y88_A Phosphoribosyl isomeras 98.1 5.9E-06 2E-10 82.2 9.7 88 455-596 32-119 (244)
120 1xg4_A Probable methylisocitra 98.1 1.5E-05 5.1E-10 82.3 12.9 153 370-585 80-240 (295)
121 1tkk_A Similar to chloromucona 98.1 6.3E-05 2.1E-09 79.6 17.8 148 369-593 130-281 (366)
122 2qgy_A Enolase from the enviro 98.1 3.1E-05 1.1E-09 82.9 15.5 140 377-593 147-288 (391)
123 3ozy_A Putative mandelate race 98.1 4E-05 1.4E-09 82.1 16.1 148 369-593 139-290 (389)
124 1vzw_A Phosphoribosyl isomeras 98.1 6.5E-06 2.2E-10 82.0 9.2 88 455-596 33-120 (244)
125 2og9_A Mandelate racemase/muco 98.1 3.6E-05 1.2E-09 82.4 15.1 128 379-583 162-291 (393)
126 1vc4_A Indole-3-glycerol phosp 98.1 3.4E-05 1.2E-09 78.0 14.0 145 428-594 96-250 (254)
127 3rcy_A Mandelate racemase/muco 98.1 4.6E-05 1.6E-09 82.8 15.9 150 378-593 145-297 (433)
128 2ox4_A Putative mandelate race 98.1 3.1E-05 1.1E-09 83.0 14.3 139 379-582 146-292 (403)
129 2qq6_A Mandelate racemase/muco 98.1 4.1E-05 1.4E-09 82.4 14.9 136 379-579 149-290 (410)
130 2rhk_C Cleavage and polyadenyl 98.1 9.4E-07 3.2E-11 72.4 1.5 52 72-135 14-65 (72)
131 1ujp_A Tryptophan synthase alp 98.0 3.8E-05 1.3E-09 78.4 13.6 184 381-586 30-235 (271)
132 3vk5_A MOEO5; TIM barrel, tran 98.0 0.00011 3.9E-09 74.8 16.7 80 509-596 192-274 (286)
133 3cwo_X Beta/alpha-barrel prote 98.0 1.4E-05 4.9E-10 77.5 9.8 86 506-595 133-218 (237)
134 2o56_A Putative mandelate race 98.0 5.2E-05 1.8E-09 81.5 14.9 137 379-580 152-296 (407)
135 2fli_A Ribulose-phosphate 3-ep 98.0 0.00018 6.2E-09 70.2 17.4 188 371-593 6-211 (220)
136 2ekc_A AQ_1548, tryptophan syn 98.0 7.1E-05 2.4E-09 75.9 14.9 188 379-586 29-240 (262)
137 3stp_A Galactonate dehydratase 98.0 6.5E-05 2.2E-09 81.1 15.4 148 368-586 167-317 (412)
138 1h1y_A D-ribulose-5-phosphate 98.0 0.00019 6.6E-09 70.9 17.4 194 371-593 9-214 (228)
139 2oz8_A MLL7089 protein; struct 98.0 0.00017 5.7E-09 77.1 18.2 125 379-580 145-273 (389)
140 2qde_A Mandelate racemase/muco 98.0 7.5E-05 2.6E-09 80.0 15.5 136 370-583 136-273 (397)
141 1tqj_A Ribulose-phosphate 3-ep 98.0 0.00012 4.1E-09 72.8 15.1 190 370-594 6-215 (230)
142 1xi3_A Thiamine phosphate pyro 98.0 0.00013 4.6E-09 70.6 15.0 160 394-593 38-203 (215)
143 1viz_A PCRB protein homolog; s 97.9 4.8E-05 1.7E-09 76.3 11.8 59 534-595 167-226 (240)
144 2pp0_A L-talarate/galactarate 97.9 0.00012 4.2E-09 78.4 15.1 127 379-582 175-303 (398)
145 2w6r_A Imidazole glycerol phos 97.9 2E-05 6.9E-10 79.4 8.2 88 455-595 31-121 (266)
146 2zad_A Muconate cycloisomerase 97.9 0.00035 1.2E-08 73.3 17.9 150 369-595 129-282 (345)
147 3d2q_A Muscleblind-like protei 97.9 2.7E-06 9.3E-11 69.2 1.1 59 72-136 4-63 (70)
148 1zfj_A Inosine monophosphate d 97.9 0.00015 5.2E-09 79.7 15.4 129 394-590 244-375 (491)
149 4af0_A Inosine-5'-monophosphat 97.9 0.00076 2.6E-08 74.3 20.6 135 379-585 279-417 (556)
150 2gdq_A YITF; mandelate racemas 97.9 0.00015 5E-09 77.4 14.6 126 378-580 135-266 (382)
151 2tps_A Protein (thiamin phosph 97.8 0.00045 1.5E-08 67.6 16.6 76 509-589 129-209 (227)
152 3i4k_A Muconate lactonizing en 97.8 0.00043 1.5E-08 73.9 17.5 149 369-593 138-288 (383)
153 3bjs_A Mandelate racemase/muco 97.8 0.00016 5.5E-09 78.3 14.3 126 377-580 182-311 (428)
154 3sjn_A Mandelate racemase/muco 97.8 0.00012 4E-09 78.0 12.5 127 380-580 147-275 (374)
155 1yad_A Regulatory protein TENI 97.8 8.5E-05 2.9E-09 72.9 10.4 144 423-594 55-206 (221)
156 4e5t_A Mandelate racemase / mu 97.8 0.0002 6.8E-09 77.0 13.8 141 378-584 150-293 (404)
157 1ea0_A Glutamate synthase [NAD 97.8 0.00013 4.6E-09 88.4 13.6 116 422-585 976-1098(1479)
158 2htm_A Thiazole biosynthesis p 97.7 0.0032 1.1E-07 63.5 21.0 48 536-585 164-212 (268)
159 3rr1_A GALD, putative D-galact 97.7 0.00027 9.2E-09 76.1 14.3 144 368-580 114-259 (405)
160 2hxt_A L-fuconate dehydratase; 97.7 0.00022 7.6E-09 77.5 13.7 128 378-580 197-324 (441)
161 3r4e_A Mandelate racemase/muco 97.7 0.00013 4.4E-09 78.9 11.5 151 368-583 132-304 (418)
162 4e4u_A Mandalate racemase/muco 97.7 0.00035 1.2E-08 75.3 14.8 142 377-584 142-286 (412)
163 3sbf_A Mandelate racemase / mu 97.7 0.00026 8.9E-09 76.0 13.7 163 369-593 123-295 (401)
164 1i4n_A Indole-3-glycerol phosp 97.7 0.00028 9.5E-09 71.2 13.0 146 428-594 91-244 (251)
165 1ofd_A Ferredoxin-dependent gl 97.7 0.00011 3.8E-09 89.3 11.7 116 422-585 1011-1133(1520)
166 2e5s_A Otthump00000018578; ZF- 97.7 3.8E-06 1.3E-10 72.9 -0.7 59 72-136 18-77 (98)
167 3jr2_A Hexulose-6-phosphate sy 97.7 0.00015 5.1E-09 71.2 10.6 173 379-588 17-202 (218)
168 3ovp_A Ribulose-phosphate 3-ep 97.7 0.002 6.7E-08 64.0 18.4 188 371-593 7-210 (228)
169 1tzz_A Hypothetical protein L1 97.7 0.00047 1.6E-08 73.7 14.8 126 379-580 165-295 (392)
170 2yw3_A 4-hydroxy-2-oxoglutarat 97.6 0.00059 2E-08 66.7 13.8 172 369-588 13-186 (207)
171 3jva_A Dipeptide epimerase; en 97.6 0.00078 2.7E-08 71.0 15.3 146 370-593 130-277 (354)
172 2f6u_A GGGPS, (S)-3-O-geranylg 97.6 0.00063 2.2E-08 67.9 13.0 54 534-590 175-228 (234)
173 3ctl_A D-allulose-6-phosphate 97.5 0.0014 4.8E-08 65.2 15.1 179 372-588 4-204 (231)
174 3tji_A Mandelate racemase/muco 97.5 0.00051 1.7E-08 74.3 12.4 163 369-593 144-316 (422)
175 1tqx_A D-ribulose-5-phosphate 97.5 0.0033 1.1E-07 62.4 17.3 186 371-593 8-214 (227)
176 1me8_A Inosine-5'-monophosphat 97.5 0.00032 1.1E-08 77.6 10.9 124 455-585 242-386 (503)
177 3tj4_A Mandelate racemase; eno 97.5 0.0015 5.2E-08 69.3 15.8 125 379-579 151-277 (372)
178 3oa3_A Aldolase; structural ge 97.5 0.0016 5.4E-08 66.7 15.0 128 394-584 138-269 (288)
179 4a29_A Engineered retro-aldol 97.5 0.002 6.8E-08 64.8 15.4 150 428-597 94-250 (258)
180 3ugv_A Enolase; enzyme functio 97.5 0.0018 6.2E-08 69.2 16.1 139 368-582 157-302 (390)
181 3toy_A Mandelate racemase/muco 97.5 0.0021 7.1E-08 68.6 16.3 136 369-580 157-294 (383)
182 4dwd_A Mandelate racemase/muco 97.5 0.0021 7.1E-08 68.9 16.3 143 368-582 125-273 (393)
183 3v3w_A Starvation sensing prot 97.4 0.0011 3.7E-08 71.8 13.9 153 369-584 139-311 (424)
184 3ro6_B Putative chloromuconate 97.4 0.00098 3.4E-08 70.3 13.0 141 369-586 130-272 (356)
185 2uva_G Fatty acid synthase bet 97.4 0.0033 1.1E-07 79.7 19.1 62 537-601 744-822 (2060)
186 3inp_A D-ribulose-phosphate 3- 97.4 0.0048 1.6E-07 62.0 16.8 189 370-593 29-236 (246)
187 3ddm_A Putative mandelate race 97.4 0.0011 3.9E-08 70.9 13.0 126 377-580 153-281 (392)
188 3vcn_A Mannonate dehydratase; 97.4 0.0011 3.7E-08 71.8 12.8 151 369-584 140-312 (425)
189 3dg3_A Muconate cycloisomerase 97.4 0.0023 7.9E-08 67.8 14.9 137 368-580 128-266 (367)
190 3my9_A Muconate cycloisomerase 97.3 0.0028 9.7E-08 67.3 15.1 141 369-586 136-278 (377)
191 1sjd_A N-acylamino acid racema 97.3 0.0019 6.5E-08 68.2 13.5 121 378-579 140-262 (368)
192 3gd6_A Muconate cycloisomerase 97.3 0.0041 1.4E-07 66.5 16.2 145 369-593 128-281 (391)
193 1pii_A N-(5'phosphoribosyl)ant 97.3 0.0019 6.6E-08 70.2 13.8 147 428-595 98-251 (452)
194 3q45_A Mandelate racemase/muco 97.3 0.0035 1.2E-07 66.4 15.4 137 370-584 131-269 (368)
195 3tcs_A Racemase, putative; PSI 97.3 0.0045 1.5E-07 66.2 16.3 141 379-588 146-288 (388)
196 3ngj_A Deoxyribose-phosphate a 97.3 0.0034 1.2E-07 62.6 14.3 123 394-584 107-235 (239)
197 3o63_A Probable thiamine-phosp 97.3 0.0018 6.1E-08 65.0 12.3 83 509-594 148-233 (243)
198 3lab_A Putative KDPG (2-keto-3 97.3 0.0026 9E-08 62.6 13.2 172 368-589 12-195 (217)
199 1w8s_A FBP aldolase, fructose- 97.3 0.0084 2.9E-07 60.7 17.2 55 537-593 184-244 (263)
200 3r12_A Deoxyribose-phosphate a 97.2 0.0029 9.8E-08 63.9 13.3 124 394-585 123-252 (260)
201 4e38_A Keto-hydroxyglutarate-a 97.2 0.002 6.9E-08 64.1 12.0 174 369-588 34-209 (232)
202 3vzx_A Heptaprenylglyceryl pho 97.2 0.0015 5.2E-08 64.8 11.0 57 536-595 167-223 (228)
203 1chr_A Chloromuconate cycloiso 97.2 0.0059 2E-07 64.6 15.9 136 370-582 133-271 (370)
204 4gj1_A 1-(5-phosphoribosyl)-5- 97.2 0.00071 2.4E-08 67.8 8.3 59 534-595 61-119 (243)
205 3go2_A Putative L-alanine-DL-g 97.2 0.0069 2.4E-07 65.1 16.4 141 378-580 142-292 (409)
206 3tha_A Tryptophan synthase alp 97.2 0.001 3.4E-08 67.1 9.0 183 379-585 26-232 (252)
207 3ndo_A Deoxyribose-phosphate a 97.2 0.0039 1.3E-07 62.0 13.0 126 394-585 92-226 (231)
208 4e4f_A Mannonate dehydratase; 97.2 0.0024 8.1E-08 69.2 12.5 153 369-583 139-312 (426)
209 3p3b_A Mandelate racemase/muco 97.1 0.001 3.6E-08 71.0 9.2 129 381-579 150-284 (392)
210 2d9m_A Zinc finger CCCH-type d 97.1 0.00027 9.1E-09 56.9 3.1 30 73-106 19-48 (69)
211 3zwt_A Dihydroorotate dehydrog 97.1 0.0062 2.1E-07 64.6 14.4 151 313-474 146-327 (367)
212 1q6o_A Humps, 3-keto-L-gulonat 97.1 0.002 7E-08 62.9 9.9 143 428-589 45-200 (216)
213 3t6c_A RSPA, putative MAND fam 97.1 0.0059 2E-07 66.3 14.4 158 369-588 145-329 (440)
214 4ef8_A Dihydroorotate dehydrog 97.0 0.0048 1.7E-07 65.2 13.1 147 313-474 126-306 (354)
215 2czd_A Orotidine 5'-phosphate 97.0 0.013 4.3E-07 56.9 15.2 138 429-589 42-194 (208)
216 3i6e_A Muconate cycloisomerase 97.0 0.015 5.3E-07 61.8 17.1 139 369-584 138-277 (385)
217 3r0u_A Enzyme of enolase super 97.0 0.014 5E-07 62.0 16.9 139 368-584 131-273 (379)
218 3oix_A Putative dihydroorotate 97.0 0.0051 1.7E-07 64.8 12.7 155 311-474 126-304 (345)
219 1ub3_A Aldolase protein; schif 97.0 0.007 2.4E-07 59.8 12.9 123 394-585 83-212 (220)
220 3d2n_A Muscleblind-like protei 97.0 0.0002 6.9E-09 60.1 1.5 57 72-136 7-64 (83)
221 3fv9_G Mandelate racemase/muco 97.0 0.012 4.2E-07 62.7 15.7 143 368-586 134-279 (386)
222 3fcp_A L-Ala-D/L-Glu epimerase 96.9 0.021 7.3E-07 60.6 17.1 149 369-593 137-287 (381)
223 3dgb_A Muconate cycloisomerase 96.9 0.017 5.7E-07 61.5 16.1 138 370-584 139-279 (382)
224 1wbh_A KHG/KDPG aldolase; lyas 96.9 0.0096 3.3E-07 58.4 12.8 175 369-588 16-192 (214)
225 3mqt_A Mandelate racemase/muco 96.9 0.0095 3.2E-07 63.7 13.8 129 382-584 155-286 (394)
226 4e8g_A Enolase, mandelate race 96.9 0.017 5.8E-07 61.7 15.7 139 368-586 153-294 (391)
227 3cu2_A Ribulose-5-phosphate 3- 96.8 0.016 5.6E-07 57.7 14.5 183 371-593 16-229 (237)
228 3ceu_A Thiamine phosphate pyro 96.8 0.0035 1.2E-07 61.1 9.0 150 394-587 25-179 (210)
229 3i65_A Dihydroorotate dehydrog 96.8 0.011 3.9E-07 63.5 13.5 150 313-474 181-374 (415)
230 3mkc_A Racemase; metabolic pro 96.8 0.01 3.6E-07 63.4 13.2 126 382-581 160-288 (394)
231 3iwp_A Copper homeostasis prot 96.7 0.028 9.4E-07 57.4 15.1 180 370-578 39-236 (287)
232 1tv5_A Dhodehase, dihydroorota 96.7 0.017 5.7E-07 62.8 14.3 151 313-474 179-402 (443)
233 1vhc_A Putative KHG/KDPG aldol 96.7 0.015 5.3E-07 57.4 12.8 173 370-587 18-192 (224)
234 3w01_A Heptaprenylglyceryl pho 96.6 0.0022 7.7E-08 63.8 6.0 57 536-595 173-229 (235)
235 2p10_A MLL9387 protein; putati 96.6 0.015 5E-07 59.2 12.1 165 368-587 94-266 (286)
236 1r0m_A N-acylamino acid racema 96.6 0.011 3.8E-07 62.5 11.7 121 378-579 147-268 (375)
237 1jub_A Dihydroorotate dehydrog 96.6 0.012 4.2E-07 60.4 11.6 153 313-474 93-271 (311)
238 2zc8_A N-acylamino acid racema 96.6 0.013 4.4E-07 61.8 11.9 122 378-580 140-262 (369)
239 2qr6_A IMP dehydrogenase/GMP r 96.5 0.0062 2.1E-07 65.0 9.4 100 453-582 141-241 (393)
240 2rpp_A Muscleblind-like protei 96.5 0.00055 1.9E-08 58.1 0.8 58 72-137 15-73 (89)
241 1jvn_A Glutamine, bifunctional 96.5 0.0075 2.6E-07 67.4 10.2 91 455-595 281-395 (555)
242 3mwc_A Mandelate racemase/muco 96.5 0.023 7.9E-07 60.8 13.4 138 369-587 150-292 (400)
243 4hnl_A Mandelate racemase/muco 96.5 0.026 9E-07 60.7 13.8 152 368-579 142-301 (421)
244 1n7k_A Deoxyribose-phosphate a 96.4 0.035 1.2E-06 55.3 13.4 120 394-585 100-228 (234)
245 2h6r_A Triosephosphate isomera 96.4 0.016 5.5E-07 56.9 10.4 44 549-594 170-213 (219)
246 1nsj_A PRAI, phosphoribosyl an 96.3 0.032 1.1E-06 54.3 12.5 180 372-587 3-187 (205)
247 1f76_A Dihydroorotate dehydrog 96.3 0.089 3.1E-06 54.6 16.1 151 313-474 133-318 (336)
248 1v5x_A PRA isomerase, phosphor 96.2 0.099 3.4E-06 50.8 15.1 175 372-587 2-181 (203)
249 3glc_A Aldolase LSRF; TIM barr 96.2 0.11 3.7E-06 53.4 15.9 40 548-589 222-266 (295)
250 1ep3_A Dihydroorotate dehydrog 96.2 0.032 1.1E-06 57.0 11.9 151 313-474 98-270 (311)
251 2e6f_A Dihydroorotate dehydrog 96.1 0.021 7.2E-07 58.7 10.5 154 312-474 92-273 (314)
252 4a35_A Mitochondrial enolase s 96.1 0.094 3.2E-06 56.9 15.7 127 377-580 199-329 (441)
253 1mxs_A KDPG aldolase; 2-keto-3 96.1 0.027 9.3E-07 55.7 10.4 172 371-587 28-201 (225)
254 3dip_A Enolase; structural gen 96.0 0.033 1.1E-06 59.8 11.7 124 394-580 170-295 (410)
255 2cu0_A Inosine-5'-monophosphat 96.0 0.0092 3.2E-07 65.5 7.5 45 538-585 318-362 (486)
256 3exr_A RMPD (hexulose-6-phosph 95.9 0.04 1.4E-06 54.2 10.9 173 379-589 16-205 (221)
257 4dye_A Isomerase; enolase fami 95.9 0.1 3.5E-06 55.8 14.7 128 380-586 169-297 (398)
258 1vkf_A Glycerol uptake operon 95.9 0.044 1.5E-06 52.6 10.5 134 426-588 45-185 (188)
259 1to3_A Putative aldolase YIHT; 95.9 0.066 2.3E-06 55.3 12.6 48 536-586 205-260 (304)
260 1p1x_A Deoxyribose-phosphate a 95.8 0.12 4.1E-06 52.2 14.0 115 394-571 97-220 (260)
261 3u9g_A Zinc finger CCCH-type a 95.8 0.0054 1.8E-07 60.2 3.8 62 72-139 87-178 (229)
262 3eoo_A Methylisocitrate lyase; 95.8 0.21 7.1E-06 51.4 15.9 95 379-476 96-193 (298)
263 4dxk_A Mandelate racemase / mu 95.6 0.035 1.2E-06 59.4 9.7 125 394-580 166-291 (400)
264 1eix_A Orotidine 5'-monophosph 95.5 0.076 2.6E-06 52.9 11.0 51 540-593 173-234 (245)
265 1m9o_A Tristetraproline; Cys3H 95.5 0.0024 8.4E-08 52.2 0.0 28 73-103 49-76 (77)
266 1twd_A Copper homeostasis prot 95.4 0.46 1.6E-05 47.7 16.2 180 372-580 3-198 (256)
267 3ru6_A Orotidine 5'-phosphate 95.3 0.49 1.7E-05 48.7 16.6 176 378-589 34-239 (303)
268 3zen_D Fatty acid synthase; tr 95.3 0.057 1.9E-06 70.9 11.5 148 421-587 463-653 (3089)
269 3ik4_A Mandelate racemase/muco 95.2 0.27 9.2E-06 51.8 14.9 135 369-580 133-270 (365)
270 1ypf_A GMP reductase; GUAC, pu 95.2 0.17 5.7E-06 52.8 13.1 102 416-579 73-176 (336)
271 2a4a_A Deoxyribose-phosphate a 95.2 0.097 3.3E-06 53.4 10.9 117 394-571 118-247 (281)
272 2uv8_G Fatty acid synthase sub 95.2 0.13 4.6E-06 65.1 14.3 156 421-587 625-809 (2051)
273 2fc6_A Nuclear, target of EGR1 95.2 0.0041 1.4E-07 46.4 0.5 28 72-102 18-45 (50)
274 2agk_A 1-(5-phosphoribosyl)-5- 95.2 0.017 5.8E-07 58.3 5.2 55 536-595 64-123 (260)
275 1vcv_A Probable deoxyribose-ph 95.2 0.25 8.6E-06 48.8 13.4 126 394-575 78-211 (226)
276 3khj_A Inosine-5-monophosphate 95.1 0.097 3.3E-06 55.3 11.1 95 422-580 79-173 (361)
277 3nl6_A Thiamine biosynthetic b 95.1 0.1 3.5E-06 58.0 11.5 78 509-590 121-219 (540)
278 3kts_A Glycerol uptake operon 95.1 0.024 8.2E-07 54.7 5.5 48 538-588 140-187 (192)
279 3ve9_A Orotidine-5'-phosphate 95.0 0.11 3.9E-06 50.9 10.3 143 428-590 40-190 (215)
280 3r2g_A Inosine 5'-monophosphat 94.9 0.048 1.7E-06 57.6 8.0 71 454-580 99-169 (361)
281 3b8i_A PA4872 oxaloacetate dec 94.9 0.77 2.6E-05 46.9 16.6 93 379-476 95-190 (287)
282 3ih1_A Methylisocitrate lyase; 94.9 0.39 1.3E-05 49.5 14.4 92 379-476 102-197 (305)
283 1s2w_A Phosphoenolpyruvate pho 94.8 1.1 3.7E-05 45.9 17.6 94 379-476 92-192 (295)
284 2hjp_A Phosphonopyruvate hydro 94.8 0.82 2.8E-05 46.7 16.6 162 267-477 20-189 (290)
285 4aaj_A N-(5'-phosphoribosyl)an 94.7 0.64 2.2E-05 45.9 15.0 179 363-584 13-206 (228)
286 3k30_A Histamine dehydrogenase 94.7 0.14 4.6E-06 58.5 11.5 136 326-476 156-325 (690)
287 2gou_A Oxidoreductase, FMN-bin 94.6 0.23 8E-06 52.4 12.4 125 326-473 161-321 (365)
288 1zlp_A PSR132, petal death pro 94.6 1.2 4E-05 46.2 17.2 96 379-476 114-211 (318)
289 3lab_A Putative KDPG (2-keto-3 94.6 0.21 7.4E-06 49.0 11.0 92 439-595 13-104 (217)
290 1vyr_A Pentaerythritol tetrani 94.5 0.3 1E-05 51.5 12.9 128 326-476 161-324 (364)
291 2ze3_A DFA0005; organic waste 94.3 1.3 4.4E-05 45.0 16.5 92 376-476 87-190 (275)
292 3m47_A Orotidine 5'-phosphate 94.3 0.5 1.7E-05 46.5 13.1 147 428-592 54-214 (228)
293 1vqt_A Orotidine 5'-phosphate 94.2 0.48 1.6E-05 46.2 12.7 133 429-593 50-205 (213)
294 4eiv_A Deoxyribose-phosphate a 94.2 0.28 9.6E-06 50.1 11.3 72 394-476 112-188 (297)
295 4fo4_A Inosine 5'-monophosphat 94.1 0.17 5.9E-06 53.5 10.0 98 422-580 80-177 (366)
296 1o66_A 3-methyl-2-oxobutanoate 94.1 0.96 3.3E-05 45.9 14.8 27 267-293 22-48 (275)
297 4e38_A Keto-hydroxyglutarate-a 94.0 0.46 1.6E-05 47.0 12.3 100 428-595 26-125 (232)
298 3hgj_A Chromate reductase; TIM 94.0 0.54 1.9E-05 49.1 13.5 134 327-477 153-320 (349)
299 1o94_A Tmadh, trimethylamine d 93.9 0.35 1.2E-05 55.5 12.9 137 326-473 149-320 (729)
300 1ps9_A 2,4-dienoyl-COA reducta 93.9 0.37 1.3E-05 54.6 13.0 137 326-476 141-311 (671)
301 1hg3_A Triosephosphate isomera 93.9 0.54 1.8E-05 46.3 12.4 45 548-594 175-219 (225)
302 2d9m_A Zinc finger CCCH-type d 93.9 0.019 6.5E-07 46.1 1.5 23 113-136 20-42 (69)
303 2yyu_A Orotidine 5'-phosphate 93.8 0.5 1.7E-05 46.9 12.2 49 540-590 167-225 (246)
304 1wa3_A 2-keto-3-deoxy-6-phosph 93.8 0.41 1.4E-05 45.6 11.3 132 439-596 10-147 (205)
305 1dbt_A Orotidine 5'-phosphate 93.5 0.77 2.6E-05 45.3 12.9 50 540-591 166-225 (239)
306 3lye_A Oxaloacetate acetyl hyd 93.5 2.8 9.5E-05 43.2 17.3 94 379-476 101-200 (307)
307 1m3u_A 3-methyl-2-oxobutanoate 93.2 0.62 2.1E-05 47.0 11.7 26 267-292 22-47 (264)
308 1w0m_A TIM, triosephosphate is 93.1 0.63 2.1E-05 45.9 11.4 44 548-593 172-215 (226)
309 1oy0_A Ketopantoate hydroxymet 93.1 0.98 3.4E-05 45.9 13.0 27 267-293 39-65 (281)
310 1vc4_A Indole-3-glycerol phosp 93.1 0.76 2.6E-05 46.0 12.1 53 536-593 94-146 (254)
311 3va8_A Probable dehydratase; e 93.0 0.97 3.3E-05 48.9 13.8 123 378-579 190-313 (445)
312 2qiw_A PEP phosphonomutase; st 93.0 1.3 4.5E-05 44.4 13.7 155 266-476 24-190 (255)
313 3tr2_A Orotidine 5'-phosphate 92.9 3.3 0.00011 41.0 16.5 46 428-476 50-95 (239)
314 4avf_A Inosine-5'-monophosphat 92.8 0.2 6.7E-06 55.1 8.0 41 537-580 258-298 (490)
315 3ldv_A Orotidine 5'-phosphate 92.8 2 6.8E-05 43.1 14.7 47 428-477 69-115 (255)
316 3vdg_A Probable glucarate dehy 92.7 1.1 3.9E-05 48.4 13.7 123 378-579 192-315 (445)
317 4ab4_A Xenobiotic reductase B; 92.5 1.4 4.9E-05 46.3 13.9 122 327-477 154-310 (362)
318 2pge_A MENC; OSBS, NYSGXRC, PS 92.5 1.4 4.7E-05 46.4 13.9 85 369-471 152-239 (377)
319 4hpn_A Putative uncharacterize 92.4 1.4 4.8E-05 46.2 13.7 111 394-579 158-268 (378)
320 3gka_A N-ethylmaleimide reduct 92.3 1.6 5.4E-05 46.0 13.9 121 328-477 163-318 (361)
321 1xg4_A Probable methylisocitra 92.3 1.1 3.8E-05 45.9 12.3 82 393-477 35-117 (295)
322 3tsm_A IGPS, indole-3-glycerol 92.2 0.34 1.2E-05 49.2 8.2 50 536-588 108-157 (272)
323 1wuf_A Hypothetical protein LI 92.0 1.3 4.6E-05 46.8 13.1 120 378-579 160-281 (393)
324 3tfx_A Orotidine 5'-phosphate 92.0 2.4 8.3E-05 42.5 14.2 46 428-476 47-92 (259)
325 2cqe_A KIAA1064 protein; CCCH 91.9 0.056 1.9E-06 46.5 1.8 25 74-101 36-60 (98)
326 4fxs_A Inosine-5'-monophosphat 91.9 0.3 1E-05 53.7 8.0 41 537-580 260-300 (496)
327 4h83_A Mandelate racemase/muco 91.8 1.3 4.6E-05 46.8 12.8 128 378-579 163-290 (388)
328 2chr_A Chloromuconate cycloiso 91.8 4.7 0.00016 42.0 16.9 129 377-580 141-269 (370)
329 4h1z_A Enolase Q92ZS5; dehydra 91.8 1.7 5.7E-05 46.5 13.6 128 376-579 185-312 (412)
330 1qap_A Quinolinic acid phospho 91.8 0.88 3E-05 46.7 10.9 33 549-584 252-284 (296)
331 3qja_A IGPS, indole-3-glycerol 91.7 0.35 1.2E-05 49.0 7.7 50 537-589 102-151 (272)
332 3eoo_A Methylisocitrate lyase; 91.6 1.5 5.1E-05 45.0 12.3 82 393-478 40-122 (298)
333 3vc5_A Mandelate racemase/muco 91.4 2 6.7E-05 46.4 13.7 123 378-579 187-310 (441)
334 4dbe_A Orotidine 5'-phosphate 91.4 1.5 5E-05 43.0 11.6 136 428-589 42-196 (222)
335 3u9i_A Mandelate racemase/muco 91.4 2.4 8.2E-05 45.0 14.2 142 369-580 155-300 (393)
336 2b7n_A Probable nicotinate-nuc 91.4 0.77 2.6E-05 46.5 9.8 39 547-588 227-265 (273)
337 3s5s_A Mandelate racemase/muco 91.3 2.5 8.6E-05 44.7 14.2 134 369-580 134-271 (389)
338 4h3d_A 3-dehydroquinate dehydr 90.9 8.3 0.00028 38.5 16.8 93 370-477 21-123 (258)
339 4af0_A Inosine-5'-monophosphat 90.9 0.39 1.3E-05 53.0 7.4 43 537-582 310-352 (556)
340 1jcn_A Inosine monophosphate d 90.7 0.43 1.5E-05 52.5 7.8 42 537-581 284-325 (514)
341 2bdq_A Copper homeostasis prot 90.7 1.5 5.1E-05 43.1 10.7 181 373-579 4-206 (224)
342 3ffs_A Inosine-5-monophosphate 90.6 0.65 2.2E-05 49.7 8.8 65 508-580 148-212 (400)
343 2fc6_A Nuclear, target of EGR1 90.6 0.07 2.4E-06 39.8 0.9 25 110-134 17-41 (50)
344 3fa4_A 2,3-dimethylmalate lyas 90.5 4 0.00014 41.8 14.3 94 379-476 93-192 (302)
345 2ozt_A TLR1174 protein; struct 90.2 6 0.00021 40.7 15.6 127 378-579 115-244 (332)
346 1y0e_A Putative N-acetylmannos 90.2 2.8 9.6E-05 40.2 12.3 108 454-580 23-146 (223)
347 1p0k_A Isopentenyl-diphosphate 90.1 11 0.00037 39.0 17.6 94 436-580 114-209 (349)
348 3vav_A 3-methyl-2-oxobutanoate 90.1 4.6 0.00016 40.9 14.0 151 392-556 46-215 (275)
349 3igs_A N-acetylmannosamine-6-p 90.0 2.1 7E-05 42.2 11.3 52 538-592 59-120 (232)
350 2hjp_A Phosphonopyruvate hydro 90.0 1.3 4.5E-05 45.2 10.1 80 393-477 33-113 (290)
351 3o1n_A 3-dehydroquinate dehydr 89.9 15 0.0005 37.1 17.8 96 370-477 41-143 (276)
352 3ih1_A Methylisocitrate lyase; 89.9 1.7 5.9E-05 44.6 10.9 81 393-478 47-128 (305)
353 1zfj_A Inosine monophosphate d 89.7 0.54 1.8E-05 51.2 7.5 43 536-581 261-303 (491)
354 1zlp_A PSR132, petal death pro 89.7 2.3 7.9E-05 44.0 11.8 81 393-477 57-139 (318)
355 3usb_A Inosine-5'-monophosphat 89.7 1.1 3.7E-05 49.5 9.9 42 537-581 285-326 (511)
356 2gjl_A Hypothetical protein PA 89.4 3 0.0001 42.8 12.5 96 422-581 51-147 (328)
357 1vrd_A Inosine-5'-monophosphat 89.3 0.68 2.3E-05 50.5 7.9 42 536-580 265-306 (494)
358 2ze3_A DFA0005; organic waste 89.3 1.9 6.4E-05 43.7 10.5 58 420-477 58-115 (275)
359 2opj_A O-succinylbenzoate-COA 89.1 1.7 5.7E-05 45.0 10.3 86 369-471 70-155 (327)
360 1qpo_A Quinolinate acid phosph 88.4 1.8 6.2E-05 44.1 9.8 38 548-588 240-277 (284)
361 3l5l_A Xenobiotic reductase A; 88.4 3.3 0.00011 43.4 12.1 132 328-476 160-326 (363)
362 3b8i_A PA4872 oxaloacetate dec 88.3 1.8 6E-05 44.2 9.6 83 393-478 39-121 (287)
363 4h2h_A Mandelate racemase/muco 88.2 8.3 0.00028 40.4 15.2 134 368-579 139-273 (376)
364 1pii_A N-(5'phosphoribosyl)ant 88.0 28 0.00097 37.6 19.3 170 372-587 256-434 (452)
365 1eep_A Inosine 5'-monophosphat 87.8 0.9 3.1E-05 48.3 7.4 41 537-580 182-222 (404)
366 1s2w_A Phosphoenolpyruvate pho 87.8 3.3 0.00011 42.3 11.3 79 394-477 38-117 (295)
367 1yxy_A Putative N-acetylmannos 87.8 6 0.0002 38.2 12.9 106 455-577 37-157 (234)
368 2jbm_A Nicotinate-nucleotide p 87.5 1.4 4.9E-05 45.1 8.5 39 547-588 242-280 (299)
369 2d9n_A Cleavage and polyadenyl 87.5 0.45 1.5E-05 38.8 3.8 37 74-121 38-74 (77)
370 2c6q_A GMP reductase 2; TIM ba 87.0 1.2 3.9E-05 46.8 7.6 42 536-580 148-189 (351)
371 3vnd_A TSA, tryptophan synthas 87.0 2.5 8.7E-05 42.5 9.8 137 425-596 4-146 (267)
372 1vhc_A Putative KHG/KDPG aldol 87.0 5.8 0.0002 38.8 12.1 92 439-595 17-108 (224)
373 1o4u_A Type II quinolic acid p 86.8 1.1 3.6E-05 45.8 6.9 38 548-588 239-276 (285)
374 3b0p_A TRNA-dihydrouridine syn 86.8 0.3 1E-05 51.2 2.9 106 454-596 112-218 (350)
375 1vs1_A 3-deoxy-7-phosphoheptul 86.7 5.1 0.00017 40.5 11.9 53 415-474 127-180 (276)
376 1x1o_A Nicotinate-nucleotide p 86.7 2.3 7.7E-05 43.4 9.3 37 549-588 240-276 (286)
377 2yci_X 5-methyltetrahydrofolat 86.5 2.7 9.1E-05 42.5 9.6 53 379-444 32-84 (271)
378 3bw2_A 2-nitropropane dioxygen 86.3 6.3 0.00022 41.1 12.9 123 421-581 45-174 (369)
379 3iv3_A Tagatose 1,6-diphosphat 86.3 12 0.00042 38.8 14.7 52 531-586 228-286 (332)
380 3d0c_A Dihydrodipicolinate syn 86.1 13 0.00045 38.0 14.9 82 379-475 31-114 (314)
381 2v82_A 2-dehydro-3-deoxy-6-pho 86.0 3 0.0001 39.8 9.4 91 438-593 6-97 (212)
382 3gr7_A NADPH dehydrogenase; fl 85.8 4.7 0.00016 41.9 11.4 133 326-476 144-308 (340)
383 1gox_A (S)-2-hydroxy-acid oxid 85.8 7.6 0.00026 40.7 13.2 44 533-580 210-253 (370)
384 3bo9_A Putative nitroalkan dio 85.7 5.1 0.00018 41.2 11.6 52 422-477 61-112 (326)
385 3q58_A N-acetylmannosamine-6-p 85.1 5.9 0.0002 38.8 11.2 50 538-590 59-118 (229)
386 3tjx_A Dihydroorotate dehydrog 85.0 9.3 0.00032 39.6 13.3 156 312-474 125-306 (354)
387 3cyj_A Mandelate racemase/muco 84.8 21 0.00072 37.1 16.0 123 380-579 145-269 (372)
388 1mxs_A KDPG aldolase; 2-keto-3 84.6 6.5 0.00022 38.4 11.2 100 426-593 16-115 (225)
389 3qld_A Mandelate racemase/muco 84.5 12 0.0004 39.5 13.9 130 369-580 138-270 (388)
390 1z41_A YQJM, probable NADH-dep 84.3 5.7 0.0002 41.0 11.2 133 326-476 144-308 (338)
391 3paj_A Nicotinate-nucleotide p 84.2 7 0.00024 40.4 11.6 31 548-581 274-304 (320)
392 2ffc_A Orotidine 5-monophospha 84.2 5 0.00017 42.0 10.7 50 425-477 149-199 (353)
393 3fa4_A 2,3-dimethylmalate lyas 83.7 6.5 0.00022 40.3 11.1 54 424-478 65-119 (302)
394 3sr7_A Isopentenyl-diphosphate 83.6 5.5 0.00019 41.9 10.8 38 538-579 196-236 (365)
395 1o60_A 2-dehydro-3-deoxyphosph 83.6 8 0.00027 39.4 11.7 55 415-476 114-168 (292)
396 4adt_A Pyridoxine biosynthetic 83.6 1 3.5E-05 46.2 5.0 85 507-595 32-121 (297)
397 3e96_A Dihydrodipicolinate syn 83.4 18 0.00063 36.9 14.5 81 379-474 31-113 (316)
398 1wbh_A KHG/KDPG aldolase; lyas 83.4 6.4 0.00022 38.1 10.5 91 439-594 16-106 (214)
399 3mzn_A Glucarate dehydratase; 83.2 13 0.00043 40.1 13.8 125 377-579 180-310 (450)
400 3qw3_A Orotidine-5-phosphate d 83.2 21 0.00073 35.5 14.4 52 379-450 88-139 (255)
401 1vhn_A Putative flavin oxidore 83.1 1.4 4.8E-05 45.2 6.0 126 329-477 74-215 (318)
402 1f6y_A 5-methyltetrahydrofolat 83.0 3.8 0.00013 41.0 8.9 54 379-445 23-76 (262)
403 2qiw_A PEP phosphonomutase; st 82.9 3.2 0.00011 41.6 8.2 56 419-477 61-116 (255)
404 1wue_A Mandelate racemase/muco 82.8 8.6 0.00029 40.4 12.0 43 535-579 239-281 (386)
405 2vc6_A MOSA, dihydrodipicolina 82.8 30 0.001 34.8 15.7 83 379-475 19-103 (292)
406 3p0w_A Mandelate racemase/muco 82.7 11 0.00038 40.9 13.1 125 377-579 198-328 (470)
407 3d0c_A Dihydrodipicolinate syn 82.0 1.6 5.5E-05 45.0 5.8 86 452-588 31-121 (314)
408 3fok_A Uncharacterized protein 81.8 24 0.00082 36.1 14.3 43 541-585 230-278 (307)
409 3lye_A Oxaloacetate acetyl hyd 81.8 9.1 0.00031 39.3 11.3 55 423-478 71-127 (307)
410 2ekc_A AQ_1548, tryptophan syn 81.8 9.2 0.00031 38.0 11.2 119 426-580 4-129 (262)
411 1vr6_A Phospho-2-dehydro-3-deo 81.7 5.6 0.00019 41.7 9.8 52 415-473 195-246 (350)
412 1m5w_A Pyridoxal phosphate bio 81.1 14 0.00049 36.5 11.8 126 454-588 25-163 (243)
413 2wqp_A Polysialic acid capsule 81.1 48 0.0016 34.5 16.7 186 371-577 22-233 (349)
414 3tr9_A Dihydropteroate synthas 81.0 9.5 0.00033 39.3 11.1 103 379-525 47-157 (314)
415 1o66_A 3-methyl-2-oxobutanoate 81.0 21 0.00072 36.0 13.5 82 392-476 34-117 (275)
416 2wkj_A N-acetylneuraminate lya 81.0 42 0.0014 34.0 16.0 83 379-475 30-114 (303)
417 1f6k_A N-acetylneuraminate lya 80.8 47 0.0016 33.3 16.3 84 379-475 22-107 (293)
418 1vli_A Spore coat polysacchari 80.8 30 0.001 36.6 15.1 188 370-577 30-245 (385)
419 3tqv_A Nicotinate-nucleotide p 80.6 7.6 0.00026 39.5 10.1 31 548-581 241-271 (287)
420 2r8w_A AGR_C_1641P; APC7498, d 80.5 40 0.0014 34.7 15.9 83 379-475 53-137 (332)
421 1xky_A Dihydrodipicolinate syn 80.5 46 0.0016 33.6 16.2 83 379-475 31-115 (301)
422 2yw3_A 4-hydroxy-2-oxoglutarat 80.5 16 0.00056 34.9 12.1 113 439-579 13-130 (207)
423 3fxg_A Rhamnonate dehydratase; 80.3 4.4 0.00015 44.0 8.7 117 394-579 179-297 (455)
424 3m5v_A DHDPS, dihydrodipicolin 80.2 44 0.0015 33.7 15.9 83 379-475 26-111 (301)
425 1qop_A Tryptophan synthase alp 80.2 7.1 0.00024 38.9 9.8 126 426-587 4-136 (268)
426 3dz1_A Dihydrodipicolinate syn 80.2 5 0.00017 41.2 8.8 29 452-480 27-55 (313)
427 3gk0_A PNP synthase, pyridoxin 80.1 19 0.00067 36.1 12.6 126 454-588 53-191 (278)
428 3ekg_A Mandelate racemase/muco 79.8 9.7 0.00033 40.5 11.2 117 394-579 173-292 (404)
429 3a5f_A Dihydrodipicolinate syn 79.7 4 0.00014 41.4 7.8 87 452-588 20-111 (291)
430 3l21_A DHDPS, dihydrodipicolin 79.5 56 0.0019 33.1 16.7 83 379-475 34-118 (304)
431 2z6i_A Trans-2-enoyl-ACP reduc 79.4 7.5 0.00026 40.0 9.9 52 422-477 47-98 (332)
432 3daq_A DHDPS, dihydrodipicolin 79.2 4.8 0.00016 40.9 8.2 86 452-588 21-112 (292)
433 1xky_A Dihydrodipicolinate syn 79.1 4.3 0.00015 41.4 7.9 87 452-588 31-122 (301)
434 1zco_A 2-dehydro-3-deoxyphosph 79.1 9.7 0.00033 38.1 10.3 53 415-474 112-165 (262)
435 2qkf_A 3-deoxy-D-manno-octulos 78.9 11 0.00036 38.2 10.6 55 415-476 111-165 (280)
436 3k13_A 5-methyltetrahydrofolat 78.9 4.7 0.00016 41.3 8.0 54 379-445 35-91 (300)
437 1o5k_A DHDPS, dihydrodipicolin 78.9 54 0.0019 33.2 16.1 83 379-475 31-115 (306)
438 2yxg_A DHDPS, dihydrodipicolin 78.7 57 0.0019 32.7 16.7 83 379-475 19-103 (289)
439 3flu_A DHDPS, dihydrodipicolin 78.7 4.5 0.00015 41.2 7.8 87 452-588 26-117 (297)
440 3m5v_A DHDPS, dihydrodipicolin 78.7 3.6 0.00012 41.9 7.2 87 452-588 26-118 (301)
441 3qze_A DHDPS, dihydrodipicolin 78.6 4 0.00014 41.9 7.5 86 452-588 42-133 (314)
442 3b4u_A Dihydrodipicolinate syn 78.5 4.9 0.00017 40.8 8.1 86 452-587 22-113 (294)
443 2ojp_A DHDPS, dihydrodipicolin 78.5 4.2 0.00014 41.2 7.5 87 453-588 21-111 (292)
444 2yxg_A DHDPS, dihydrodipicolin 78.4 4.4 0.00015 41.0 7.7 87 452-588 19-110 (289)
445 3na8_A Putative dihydrodipicol 78.4 54 0.0018 33.4 16.0 83 379-475 43-127 (315)
446 3cpr_A Dihydrodipicolinate syn 78.3 4.4 0.00015 41.4 7.7 87 452-588 35-126 (304)
447 2ehh_A DHDPS, dihydrodipicolin 78.3 59 0.002 32.6 17.2 83 379-475 19-103 (294)
448 3nav_A Tryptophan synthase alp 78.2 13 0.00044 37.4 10.9 137 425-596 6-148 (271)
449 3q94_A Fructose-bisphosphate a 78.1 62 0.0021 32.8 18.8 142 374-584 87-240 (288)
450 1gvf_A Tagatose-bisphosphate a 78.0 62 0.0021 32.7 16.6 48 534-584 188-236 (286)
451 1f6k_A N-acetylneuraminate lya 78.0 4.7 0.00016 40.9 7.7 86 453-588 23-114 (293)
452 3pfr_A Mandelate racemase/muco 78.0 16 0.00054 39.5 12.3 125 378-579 184-313 (455)
453 2ehh_A DHDPS, dihydrodipicolin 78.0 4.4 0.00015 41.1 7.5 87 452-588 19-110 (294)
454 2rfg_A Dihydrodipicolinate syn 77.9 3.9 0.00013 41.6 7.1 87 452-588 19-110 (297)
455 2v9d_A YAGE; dihydrodipicolini 77.9 54 0.0019 33.9 16.0 83 379-475 50-134 (343)
456 3gnn_A Nicotinate-nucleotide p 77.9 8.5 0.00029 39.4 9.5 32 548-582 252-283 (298)
457 2wkj_A N-acetylneuraminate lya 77.7 4.8 0.00016 41.1 7.7 86 453-588 31-121 (303)
458 2vef_A Dihydropteroate synthas 77.6 4.5 0.00015 41.7 7.4 104 379-525 31-138 (314)
459 3si9_A DHDPS, dihydrodipicolin 77.6 65 0.0022 32.8 16.3 83 379-475 41-125 (315)
460 2r8w_A AGR_C_1641P; APC7498, d 77.6 4.1 0.00014 42.2 7.3 87 452-588 53-144 (332)
461 3cpr_A Dihydrodipicolinate syn 77.3 65 0.0022 32.6 16.1 83 379-475 35-119 (304)
462 3sz8_A 2-dehydro-3-deoxyphosph 77.2 23 0.00079 35.9 12.4 56 415-477 116-172 (285)
463 1q7z_A 5-methyltetrahydrofolat 77.2 94 0.0032 34.4 21.3 222 263-577 106-410 (566)
464 1o5k_A DHDPS, dihydrodipicolin 77.0 5.2 0.00018 40.9 7.7 87 452-588 31-122 (306)
465 3tak_A DHDPS, dihydrodipicolin 77.0 4.8 0.00016 40.8 7.4 86 452-588 20-111 (291)
466 3l21_A DHDPS, dihydrodipicolin 76.9 5.2 0.00018 40.9 7.7 86 452-588 34-125 (304)
467 3qze_A DHDPS, dihydrodipicolin 76.8 67 0.0023 32.7 16.1 83 379-475 42-126 (314)
468 1vli_A Spore coat polysacchari 76.6 25 0.00086 37.1 13.0 118 443-569 33-178 (385)
469 4g8t_A Glucarate dehydratase; 76.4 22 0.00075 38.4 12.9 128 379-579 202-330 (464)
470 2rfg_A Dihydrodipicolinate syn 76.3 58 0.002 32.8 15.3 83 379-475 19-103 (297)
471 3v5c_A Mandelate racemase/muco 75.9 13 0.00046 39.1 10.8 82 380-471 149-232 (392)
472 3c2e_A Nicotinate-nucleotide p 75.7 1.2 4E-05 45.7 2.4 63 513-588 216-285 (294)
473 3sgz_A Hydroxyacid oxidase 2; 75.7 9.8 0.00033 39.8 9.5 45 531-579 200-244 (352)
474 3b4u_A Dihydrodipicolinate syn 75.6 49 0.0017 33.3 14.6 83 379-475 22-106 (294)
475 3ijl_A Muconate cycloisomerase 75.4 13 0.00044 38.4 10.3 77 374-471 129-205 (338)
476 2v9d_A YAGE; dihydrodipicolini 75.3 5 0.00017 41.7 7.2 87 452-588 50-141 (343)
477 2r91_A 2-keto-3-deoxy-(6-phosp 75.3 5.1 0.00017 40.5 7.0 85 452-587 17-105 (286)
478 1sfl_A 3-dehydroquinate dehydr 75.2 47 0.0016 32.4 13.9 95 370-477 5-107 (238)
479 3na8_A Putative dihydrodipicol 74.5 4.9 0.00017 41.3 6.8 87 452-588 43-134 (315)
480 1m3u_A 3-methyl-2-oxobutanoate 74.2 42 0.0014 33.6 13.3 81 393-476 35-116 (264)
481 1w3i_A EDA, 2-keto-3-deoxy glu 73.8 5.8 0.0002 40.3 7.0 85 453-587 19-106 (293)
482 3flu_A DHDPS, dihydrodipicolin 73.7 79 0.0027 31.8 16.1 83 379-475 26-110 (297)
483 3fkr_A L-2-keto-3-deoxyarabona 73.6 59 0.002 33.0 14.7 83 379-475 27-111 (309)
484 3s5o_A 4-hydroxy-2-oxoglutarat 73.6 8 0.00027 39.5 8.1 29 452-480 33-61 (307)
485 2fym_A Enolase; RNA degradosom 73.6 16 0.00056 39.0 10.9 45 534-579 294-340 (431)
486 2hmc_A AGR_L_411P, dihydrodipi 73.3 6.6 0.00023 40.9 7.5 29 452-480 45-73 (344)
487 3l0g_A Nicotinate-nucleotide p 73.2 14 0.00049 37.7 9.7 30 548-580 250-279 (300)
488 3eb2_A Putative dihydrodipicol 73.2 81 0.0028 31.8 15.5 130 379-577 23-163 (300)
489 3tqp_A Enolase; energy metabol 73.1 23 0.0008 37.9 11.9 45 534-580 290-337 (428)
490 3si9_A DHDPS, dihydrodipicolin 73.0 6.4 0.00022 40.4 7.2 87 452-588 41-132 (315)
491 3vkj_A Isopentenyl-diphosphate 72.8 36 0.0012 35.6 13.1 41 536-579 175-217 (368)
492 3fkr_A L-2-keto-3-deoxyarabona 72.8 7.8 0.00027 39.6 7.8 29 452-480 27-55 (309)
493 2ojp_A DHDPS, dihydrodipicolin 72.8 50 0.0017 33.1 13.8 83 379-475 20-104 (292)
494 2vc6_A MOSA, dihydrodipicolina 72.8 4.9 0.00017 40.7 6.2 87 452-588 19-110 (292)
495 2yr1_A 3-dehydroquinate dehydr 72.8 77 0.0026 31.3 18.7 96 370-477 21-124 (257)
496 3noy_A 4-hydroxy-3-methylbut-2 72.5 24 0.00081 37.0 11.2 51 538-593 74-125 (366)
497 1w6t_A Enolase; bacterial infe 72.4 40 0.0014 36.0 13.7 45 534-579 306-352 (444)
498 2nuw_A 2-keto-3-deoxygluconate 72.2 5.7 0.0002 40.2 6.5 85 453-587 19-106 (288)
499 3dz1_A Dihydrodipicolinate syn 72.1 69 0.0024 32.5 14.8 82 379-474 27-109 (313)
500 1oy0_A Ketopantoate hydroxymet 71.8 52 0.0018 33.2 13.4 81 392-476 51-135 (281)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1.1e-41 Score=357.66 Aligned_cols=228 Identities=30% Similarity=0.557 Sum_probs=191.1
Q ss_pred eeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHHHHHH
Q psy9514 255 IDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTKCTQL 334 (611)
Q Consensus 255 l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~~a~~ 334 (611)
++|+||++||||+++++++||++++++|++++||||+.+.++..+.+..|..+ .|..+.++++||+|++
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~---------- 69 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSE---------- 69 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSC----------
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCC----------
Confidence 46899999999999999999999999999999999999998887777777777 6666666666665544
Q ss_pred HhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccc
Q psy9514 335 LEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQG 414 (611)
Q Consensus 335 l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g 414 (611)
|+.+.++|+++.+ + ||+||||+|||..++++++
T Consensus 70 ---------------------------------------------~~~~~~aa~~a~~-~-~d~Iein~gcP~~~~r~~~ 102 (318)
T 1vhn_A 70 ---------------------------------------------PNELSEAARILSE-K-YKWIDLNAGCPVRKVVKEG 102 (318)
T ss_dssp ---------------------------------------------HHHHHHHHHHHTT-T-CSEEEEEECCCCHHHHHTT
T ss_pred ---------------------------------------------HHHHHHHHHHHHH-h-CCEEEEECCCCcHhcCCCC
Confidence 4455566666654 4 9999999999999999999
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHH
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKC 494 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~ 494 (611)
||++|++|++++.+++++|++++++||+||+|.|+.... ..++++.++++|+++|+||+|++.+.|
T Consensus 103 ~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~--~~~~a~~l~~~G~d~i~v~g~~~~~~~------------ 168 (318)
T 1vhn_A 103 AGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE--VEEIYRILVEEGVDEVFIHTRTVVQSF------------ 168 (318)
T ss_dssp CGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCC--HHHHHHHHHHTTCCEEEEESSCTTTTT------------
T ss_pred cccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHH--HHHHHHHHHHhCCCEEEEcCCCccccC------------
Confidence 999999999999999999999999999999999986643 348999999999999999999876663
Q ss_pred hhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCc
Q psy9514 495 AQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSI 574 (611)
Q Consensus 495 ~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~a 574 (611)
.++++|+++.++.+ ++|||+||||.|++|+.++++.+ +|
T Consensus 169 -------------------------------------~~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~-ga 207 (318)
T 1vhn_A 169 -------------------------------------TGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEES-GC 207 (318)
T ss_dssp -------------------------------------SSCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHH-CC
T ss_pred -------------------------------------CCCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcC-CC
Confidence 33444544444433 79999999999999999999954 49
Q ss_pred cEEEEcHHhhhCCchHHHHHc
Q psy9514 575 SGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 575 D~VmIGRgaL~dP~lf~ei~~ 595 (611)
|+|||||++|.|||+|.++++
T Consensus 208 d~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 208 DGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp SEEEESGGGTTCTTHHHHHHH
T ss_pred CEEEECHHHHhCcchHHHHHH
Confidence 999999999999999999988
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=4.2e-40 Score=350.01 Aligned_cols=240 Identities=23% Similarity=0.389 Sum_probs=194.4
Q ss_pred eecCcEEeccCCCCCCHHHHHHHHHcCC-CEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHHHHHH
Q psy9514 256 DWQGKLYLSPLTTVGNLPFRRLCKKWGA-DITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTKCTQL 334 (611)
Q Consensus 256 ~l~nrivlAPMt~~gnlpfRrl~~~~Ga-~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~~a~~ 334 (611)
.|+||++||||+++++.+||.+++.+|+ +++||||+.+.+++.+... .+...|..+.
T Consensus 1 ~l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~--~~~~~~~~~~-------------------- 58 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE--RLLAFRPEEH-------------------- 58 (350)
T ss_dssp -CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHH--HHHCCCGGGC--------------------
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHH--HHhccCCCCC--------------------
Confidence 3789999999999999999999999986 9999999998877544331 1222233333
Q ss_pred HhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccc
Q psy9514 335 LEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQG 414 (611)
Q Consensus 335 l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g 414 (611)
++++|++|++|+.+.++|+++.+ .|||+||||+|||..++++++
T Consensus 59 -----------------------------------p~~vQL~g~~p~~~~~aA~~a~~-~G~D~IeIn~gcP~~~~~~d~ 102 (350)
T 3b0p_A 59 -----------------------------------PIALQLAGSDPKSLAEAARIGEA-FGYDEINLNLGCPSEKAQEGG 102 (350)
T ss_dssp -----------------------------------SEEEEEECSCHHHHHHHHHHHHH-TTCSEEEEEECCCSHHHHHTT
T ss_pred -----------------------------------eEEEEeCCCCHHHHHHHHHHHHH-cCCCEEEECCcCCCCcCcCCC
Confidence 45566666666667777777653 599999999999999999999
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCc--hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHH
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDN--NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIE 492 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~--~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~ 492 (611)
||++|+++++++.+||++|++++++||+||+|+|+.+.. .++.++++.++++|+++|+||+|++.+.++...
T Consensus 103 ~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~------ 176 (350)
T 3b0p_A 103 YGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKA------ 176 (350)
T ss_dssp CGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC-------------
T ss_pred cchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCccc------
Confidence 999999999999999999999999999999999987643 367899999999999999999998654321000
Q ss_pred HHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCC
Q psy9514 493 KCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSP 572 (611)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~ 572 (611)
.++..+.+|++++++.+...++|||+||||.|++|+.++++ |
T Consensus 177 ------------------------------------~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-G- 218 (350)
T 3b0p_A 177 ------------------------------------NREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-R- 218 (350)
T ss_dssp ---------------------------------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-T-
T ss_pred ------------------------------------ccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-C-
Confidence 01334568999999877655899999999999999999997 7
Q ss_pred CccEEEEcHHhhhCCchHHHHHcccC
Q psy9514 573 SISGVMIGRGALIKPWIFQEIKEKKL 598 (611)
Q Consensus 573 ~aD~VmIGRgaL~dP~lf~ei~~g~~ 598 (611)
||+|||||++|.|||||.+++++-.
T Consensus 219 -aD~V~iGRa~l~~P~l~~~i~~~l~ 243 (350)
T 3b0p_A 219 -VDGVMLGRAVYEDPFVLEEADRRVF 243 (350)
T ss_dssp -SSEEEECHHHHHCGGGGTTHHHHTT
T ss_pred -CCEEEECHHHHhCcHHHHHHHHHhc
Confidence 9999999999999999999987543
No 3
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=3.3e-37 Score=326.40 Aligned_cols=295 Identities=13% Similarity=0.103 Sum_probs=215.3
Q ss_pred CCCcccccCeeecCcEEeccCCCCCC-----------HHHHHHHHHcCCCEEEecCcccchhhcCChh-----------h
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGN-----------LPFRRLCKKWGADITCSEMAVATELLKSSPQ-----------E 303 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gn-----------lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~-----------e 303 (611)
=|+|+++++++|+||++||||++... +.|..-.++.|++||+||.+.+++..++.+. .
T Consensus 5 Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~ 84 (340)
T 3gr7_A 5 LFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAG 84 (340)
T ss_dssp TTSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHH
T ss_pred cCCCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHH
Confidence 48999999999999999999987421 2344444567999999999999877665432 3
Q ss_pred hHhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchH
Q psy9514 304 WALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPY 381 (611)
Q Consensus 304 ~~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~ 381 (611)
|..+ ..|..+.++++||+|.+..... +...+- ..+++........++|+.+++.-+ .+
T Consensus 85 ~~~~~~~vh~~G~~i~~QL~H~Gr~~~~----------~~~~~~---pS~~~~~~~~~~p~~mt~~eI~~i-------i~ 144 (340)
T 3gr7_A 85 LRELVGLVKEHGAAIGIQLAHAGRKSQV----------PGEIIA---PSAVPFDDSSPTPKEMTKADIEET-------VQ 144 (340)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCCS----------SSCCEE---SSSCCSSTTSCCCEECCHHHHHHH-------HH
T ss_pred HHHHHHHHHhCCCeEEEEeccCCCccCC----------CCCccC---CCCccccCCCCCCccCCHHHHHHH-------HH
Confidence 4433 3377788888888877643211 000000 001111000112345555554433 45
Q ss_pred HHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc--
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH-- 450 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~-- 450 (611)
.|++||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++.||.||++....
T Consensus 145 ~f~~aA~~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 145 AFQNGARRAK-EAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHH-HHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCST
T ss_pred HHHHHHHHHH-HcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 6777777775 3699999999996 999999999999999999999999999999999999999987421
Q ss_pred --CCchHHHHHHHHHHHcCCCEEEEEcc-ccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 451 --KDNNIIHNFMPKFRDWGASLITLHGR-TREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 451 --~~~~~a~~la~~l~~aGvd~ItvhgR-~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
.+.+++.++++.|+++|+|+|+||.+ ...+...
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~-------------------------------------------- 259 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMN-------------------------------------------- 259 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCC--------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCC--------------------------------------------
Confidence 23467899999999999999999954 3211100
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCcc---cc
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDIY---AI 604 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~dis---~~ 604 (611)
.....++++++++.+. .++|||++|+|+|+++++++++.| .||+|||||++|.||||+++++++...++. ..
T Consensus 260 ---~~~~~~~~~~~~ik~~-~~iPVi~~GgI~s~e~a~~~L~~G-~aD~V~iGR~~lanPdl~~ki~~~l~~~~~~~~~~ 334 (340)
T 3gr7_A 260 ---VYPGYQVPFAELIRRE-ADIPTGAVGLITSGWQAEEILQNG-RADLVFLGRELLRNPYWPYAAARELGAKISAPVQY 334 (340)
T ss_dssp ---CCTTTTHHHHHHHHHH-TTCCEEEESSCCCHHHHHHHHHTT-SCSEEEECHHHHHCTTHHHHHHHHTTCCCCCCGGG
T ss_pred ---CCccccHHHHHHHHHH-cCCcEEeeCCCCCHHHHHHHHHCC-CeeEEEecHHHHhCchHHHHHHHHCCCCCCCCchh
Confidence 1122356777777665 489999999999999999999998 899999999999999999999998765554 44
Q ss_pred cccccC
Q psy9514 605 VWKWRY 610 (611)
Q Consensus 605 e~~~~~ 610 (611)
.++|+|
T Consensus 335 ~~~~~~ 340 (340)
T 3gr7_A 335 ERGWRF 340 (340)
T ss_dssp TTTSCC
T ss_pred hhccCC
Confidence 555654
No 4
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=5.5e-37 Score=328.77 Aligned_cols=292 Identities=12% Similarity=0.069 Sum_probs=216.8
Q ss_pred CCCcccccCeeecCcEEeccCCCC-------CCHHHHHHHHHcCCCEEEecCcccchhhcCCh-----------hhhHhH
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTV-------GNLPFRRLCKKWGADITCSEMAVATELLKSSP-----------QEWALI 307 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~-------gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~~l~ 307 (611)
=|+|+++++++|+||++||||++. ++..++.++.+.|++||+|||+.+++...+.+ ..|..+
T Consensus 11 Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 90 (377)
T 2r14_A 11 LFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGV 90 (377)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHH
T ss_pred cCCCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHH
Confidence 589999999999999999999976 67889999999999999999999987665532 247766
Q ss_pred h--hccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcc--hhh-----------ccCCCcccccccccee
Q psy9514 308 K--RHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIE--FIY-----------KQGSGSGLLQRANLFG 372 (611)
Q Consensus 308 ~--~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~--~~~-----------~~~~~~~l~~~~~~~i 372 (611)
. .|..+.++++||+|.+...... +...+ ...+- .+..|.+ ..+ .....++|+.+++..
T Consensus 91 ~~avh~~G~~i~~QL~H~Gr~~~~~----~~~~~-~~~~a-pS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~- 163 (377)
T 2r14_A 91 VEAVHAKGGRIALQLWHVGRVSHEL----VQPDG-QQPVA-PSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPG- 163 (377)
T ss_dssp HHHHHHTTCCEEEEEECCTTSCCTT----TSGGG-CCCEE-SSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHH-
T ss_pred HHHHhhcCCeEEEEccCCccccccc----cccCC-CcccC-CCcccccccccccccccccccccCCCCCccCCHHHHHH-
Confidence 3 5888999999999876432211 00000 00000 0001100 000 001223444444443
Q ss_pred eecccCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCC-CEE
Q psy9514 373 VQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL-PIT 442 (611)
Q Consensus 373 vQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~-Pvt 442 (611)
..+.|+++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++. ||.
T Consensus 164 ------~i~~f~~aA~~a~-~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~ 236 (377)
T 2r14_A 164 ------IVEDYRQAAQRAK-RAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVG 236 (377)
T ss_dssp ------HHHHHHHHHHHHH-HHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred ------HHHHHHHHHHHHH-HcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEE
Confidence 3467888888775 3699999999998 9999999999999999999999999999999963 999
Q ss_pred EEEEcccc-------CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhc
Q psy9514 443 VKTRTGIH-------KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDW 515 (611)
Q Consensus 443 VKiR~g~~-------~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~ 515 (611)
||++.... .+.+++.++++.|+++|+++|+||+|+..+.
T Consensus 237 vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~---------------------------------- 282 (377)
T 2r14_A 237 IRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGG---------------------------------- 282 (377)
T ss_dssp EEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------------------------------------
T ss_pred EEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCC----------------------------------
Confidence 99987421 1235688999999999999999999863221
Q ss_pred CCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 516 GASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 516 G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.. ..|++++++.+. .++|||+||+| ++++++++++.| .||+||+||++|.||||++++++
T Consensus 283 ---------------~~~-~~~~~~~~ik~~-~~iPvi~~Ggi-~~~~a~~~l~~g-~aD~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 283 ---------------DIT-YPEGFREQMRQR-FKGGLIYCGNY-DAGRAQARLDDN-TADAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp -----------------C-CCTTHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHHHH
T ss_pred ---------------CCc-chHHHHHHHHHH-CCCCEEEECCC-CHHHHHHHHHCC-CceEEeecHHHHhCchHHHHHHc
Confidence 111 135566666554 58999999999 699999999998 89999999999999999999999
Q ss_pred ccCCCcccc
Q psy9514 596 KKLFDIYAI 604 (611)
Q Consensus 596 g~~~dis~~ 604 (611)
|+.+....+
T Consensus 344 g~~l~~~~~ 352 (377)
T 2r14_A 344 GAALNEPDP 352 (377)
T ss_dssp TCCCCCCCG
T ss_pred CCCCCCCCH
Confidence 987754443
No 5
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=1.1e-36 Score=322.28 Aligned_cols=285 Identities=13% Similarity=0.108 Sum_probs=214.3
Q ss_pred CCCcccccCeeecCcEEeccCCCCCC-----HH-------HHHHHHHcCCCEEEecCcccchhhcCCh-----------h
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGN-----LP-------FRRLCKKWGADITCSEMAVATELLKSSP-----------Q 302 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gn-----lp-------fRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~ 302 (611)
=|+|+++++++|+||++||||++... .| |++.+ ++|++||+|||+.+++...+.+ .
T Consensus 5 Lf~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~ 83 (338)
T 1z41_A 5 LFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIE 83 (338)
T ss_dssp GGSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHH
T ss_pred cCCCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCHHHHH
Confidence 48999999999999999999997642 34 44444 5799999999999887655432 2
Q ss_pred hhHhHh--hccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCch
Q psy9514 303 EWALIK--RHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNP 380 (611)
Q Consensus 303 e~~l~~--~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p 380 (611)
.|..+. .|..+.++++||+|.+...... ....+.+.+ |.+. ......+|+.+++.- ..
T Consensus 84 ~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~-----~~~~~pS~~------~~~~--~~~~p~~mt~~eI~~-------~i 143 (338)
T 1z41_A 84 GFAKLTEQVKEQGSKIGIQLAHAGRKAELE-----GDIFAPSAI------AFDE--QSATPVEMSAEKVKE-------TV 143 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCCS-----SCCEESSSC------CSST--TSCCCEECCHHHHHH-------HH
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCcccCCC-----CCCcCCCCC------CCCC--CCCCCccCCHHHHHH-------HH
Confidence 466553 5888999999999876432110 000011111 1100 011223444444332 34
Q ss_pred HHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc-
Q psy9514 381 YVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH- 450 (611)
Q Consensus 381 ~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~- 450 (611)
+.|+++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+|+++|+++++.||.||++....
T Consensus 144 ~~~~~aA~~a~-~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~ 222 (338)
T 1z41_A 144 QEFKQAAARAK-EAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYT 222 (338)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCS
T ss_pred HHHHHHHHHHH-HcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccC
Confidence 78888888886 4799999999998 888999999999999999999999999999999999999987311
Q ss_pred ---CCchHHHHHHHHHHHcCCCEEEEEccccc-cccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 451 ---KDNNIIHNFMPKFRDWGASLITLHGRTRE-QRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 451 ---~~~~~a~~la~~l~~aGvd~ItvhgR~r~-qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
.+.+++.++++.|++.|+++|+||+++.. +.+
T Consensus 223 ~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~-------------------------------------------- 258 (338)
T 1z41_A 223 DKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADI-------------------------------------------- 258 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCC--------------------------------------------
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCC--------------------------------------------
Confidence 13457889999999999999999998632 100
Q ss_pred ccccccC-CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCcc
Q psy9514 527 REQRYTK-QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDIY 602 (611)
Q Consensus 527 r~g~~~~-~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~dis 602 (611)
..+ ..++++++++.+.. ++|||++|+|.|+++++++++.| .||+|||||++|.||||+++++++...+|.
T Consensus 259 ----~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G-~aD~V~iGR~~i~nPdl~~ki~~~~~~~i~ 329 (338)
T 1z41_A 259 ----NVFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNG-RADLIFIGRELLRDPFFARTAAKQLNTEIP 329 (338)
T ss_dssp ----CCCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTT-SCSEEEECHHHHHCTTHHHHHHHHTTCCCC
T ss_pred ----CCCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcC-CceEEeecHHHHhCchHHHHHHcCCCcccC
Confidence 111 12567777776654 89999999999999999999998 899999999999999999999999887765
No 6
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=8.2e-37 Score=327.43 Aligned_cols=292 Identities=11% Similarity=0.069 Sum_probs=210.7
Q ss_pred CCCcccccCeeecCcEEeccCCCCC---CHH-------HHHHHHHcCCCEEEecCcccchhhcCCh-----------hhh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG---NLP-------FRRLCKKWGADITCSEMAVATELLKSSP-----------QEW 304 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g---nlp-------fRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~ 304 (611)
-|+|+++++++|+||++||||++.. +.| |+++++ |++||+||++.+++...+.+ ..|
T Consensus 16 Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 93 (376)
T 1icp_A 16 LMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAW 93 (376)
T ss_dssp GGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHH
T ss_pred cCCCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHHH
Confidence 5899999999999999999999864 344 666654 79999999999987665532 247
Q ss_pred HhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhh--------ccCCCccccccccceeee
Q psy9514 305 ALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIY--------KQGSGSGLLQRANLFGVQ 374 (611)
Q Consensus 305 ~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~--------~~~~~~~l~~~~~~~ivQ 374 (611)
..+ ..|..+.++++||+|.+...... +...+ ...+. .+..|.+..+ ......+|+.+++.
T Consensus 94 k~l~~avh~~G~~i~~QL~H~Gr~~~~~----~~~~~-~~~~a-pS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~---- 163 (376)
T 1icp_A 94 KPIVDAVHAKGGIFFCQIWHVGRVSNKD----FQPNG-EDPIS-CTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIP---- 163 (376)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTSSCTT----TSGGG-CCCEE-SSSCCCCCEECTTSSCEECCCCCEECCTTTHH----
T ss_pred HHHHHHHHhcCCeEEEEeecCCCCcCcc----cccCC-Cceec-CCCCCCccccccccccccCCCCCCcCCHHHHH----
Confidence 666 45999999999999976443211 00000 00000 0011110000 00112344444333
Q ss_pred cccCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCC-CEEEE
Q psy9514 375 LCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL-PITVK 444 (611)
Q Consensus 375 i~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~-PvtVK 444 (611)
..++.|+++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++. ||.||
T Consensus 164 ---~~i~~f~~AA~~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vr 239 (376)
T 1icp_A 164 ---QIVNEFRVAARNAI-EAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIR 239 (376)
T ss_dssp ---HHHHHHHHHHHHHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred ---HHHHHHHHHHHHHH-HcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEE
Confidence 34578888888886 4799999999998 9899999999999999999999999999999963 99999
Q ss_pred EEcccc-------CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCC
Q psy9514 445 TRTGIH-------KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGA 517 (611)
Q Consensus 445 iR~g~~-------~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~ 517 (611)
++.... ...+.+.++++.|+++|+++|++|+|+..+.+
T Consensus 240 ls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~----------------------------------- 284 (376)
T 1icp_A 240 ISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAW----------------------------------- 284 (376)
T ss_dssp ECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC-------------------------------------
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCC-----------------------------------
Confidence 986421 12245789999999999999999998643210
Q ss_pred ceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHccc
Q psy9514 518 SLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKK 597 (611)
Q Consensus 518 ~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~ 597 (611)
....+|.+++++.+. .++|||+||+| ++++++++++.| .||+|||||++|.||||++++++|+
T Consensus 285 --------------~~~~~~~~~~~vr~~-~~iPvi~~G~i-~~~~a~~~l~~g-~aD~V~~gR~~l~~P~l~~k~~~g~ 347 (376)
T 1icp_A 285 --------------EKIECTESLVPMRKA-YKGTFIVAGGY-DREDGNRALIED-RADLVAYGRLFISNPDLPKRFELNA 347 (376)
T ss_dssp ------------------CCCCSHHHHHH-CCSCEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred --------------CccccHHHHHHHHHH-cCCCEEEeCCC-CHHHHHHHHHCC-CCcEEeecHHHHhCccHHHHHHcCC
Confidence 000122334444444 58999999999 999999999998 8999999999999999999999998
Q ss_pred CCCccccc
Q psy9514 598 LFDIYAIV 605 (611)
Q Consensus 598 ~~dis~~e 605 (611)
.+....++
T Consensus 348 ~l~~~~~~ 355 (376)
T 1icp_A 348 PLNKYNRD 355 (376)
T ss_dssp CCCCCCGG
T ss_pred CCCCCCHH
Confidence 87654443
No 7
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=2.3e-36 Score=326.35 Aligned_cols=299 Identities=12% Similarity=0.088 Sum_probs=212.9
Q ss_pred CCCcccccCeeecCcEEeccCCCCC---CHH-------HHHHHHHcCCCEEEecCcccchhhcCCh-----------hhh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG---NLP-------FRRLCKKWGADITCSEMAVATELLKSSP-----------QEW 304 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g---nlp-------fRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~ 304 (611)
=|+|+++++++|+||++||||++.. +.| |+++++ |++||+||++.+++...+.+ ..|
T Consensus 18 Lf~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~ 95 (402)
T 2hsa_B 18 LFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREW 95 (402)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHH
T ss_pred cCCCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCCCCcccCCHHHHHHH
Confidence 5899999999999999999999865 355 455443 69999999999987655432 247
Q ss_pred HhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcch---hh-------ccCCCcccccccccee
Q psy9514 305 ALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEF---IY-------KQGSGSGLLQRANLFG 372 (611)
Q Consensus 305 ~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~---~~-------~~~~~~~l~~~~~~~i 372 (611)
..+ ..|..+.++++||+|.+...... +... +...+. ....|.+. .+ ......+|+.+++.
T Consensus 96 k~l~~avh~~G~~i~~QL~H~Gr~~~~~----~~~~-g~~~~a-pS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~-- 167 (402)
T 2hsa_B 96 KKIVDVVHAKGAVIFCQLWHVGRASHEV----YQPA-GAAPIS-STEKPISNRWRILMPDGTHGIYPKPRAIGTYEIS-- 167 (402)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTSCCGG----GCTT-CCCCEE-SCSCCCCTTCEEECTTSCEEECCCCEECCGGGHH--
T ss_pred HHHHHHHHhcCCeEEEEeccCCcccccc----cccC-CCcccc-CCCcccccccccccccccccCCCCCccCCHHHHH--
Confidence 665 45888999999999876443211 0000 000000 00001000 00 00112333333333
Q ss_pred eecccCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcC-CCEE
Q psy9514 373 VQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPIT 442 (611)
Q Consensus 373 vQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~Pvt 442 (611)
...+.|++||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++ .||.
T Consensus 168 -----~ii~~f~~AA~~a~-~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~ 241 (402)
T 2hsa_B 168 -----QVVEDYRRSALNAI-EAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVG 241 (402)
T ss_dssp -----HHHHHHHHHHHHHH-HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred -----HHHHHHHHHHHHHH-HcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEE
Confidence 34567888888876 4799999999998 999999999999999999999999999999996 5999
Q ss_pred EEEEcccc-----C--CchHHHHHHHHHHHcC------CCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcc
Q psy9514 443 VKTRTGIH-----K--DNNIIHNFMPKFRDWG------ASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFM 509 (611)
Q Consensus 443 VKiR~g~~-----~--~~~~a~~la~~l~~aG------vd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~ 509 (611)
||++.... . ..+++.++++.|+++| +++|+||+++..+.+..+...
T Consensus 242 vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~--------------------- 300 (402)
T 2hsa_B 242 VRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGR--------------------- 300 (402)
T ss_dssp EEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTT---------------------
T ss_pred EEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCcccc---------------------
Confidence 99987521 1 1246889999999999 999999998743311000000
Q ss_pred hhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 510 PKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 510 ~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
+ ..+...|++++++.+. .++|||+||+| |+++++++|+.| .||+|||||++|.||||
T Consensus 301 --~------------------~~~~~~~~~~~~vk~~-~~iPvi~~G~i-~~~~a~~~l~~g-~aD~V~igR~~l~dP~l 357 (402)
T 2hsa_B 301 --L------------------GSEEEEARLMRTLRNA-YQGTFICSGGY-TRELGIEAVAQG-DADLVSYGRLFISNPDL 357 (402)
T ss_dssp --T------------------THHHHHHHHHHHHHHH-CSSCEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHHCTTH
T ss_pred --c------------------cCCcchHHHHHHHHHH-CCCCEEEeCCC-CHHHHHHHHHCC-CCceeeecHHHHhCchH
Confidence 0 0011246666666554 58999999999 999999999998 89999999999999999
Q ss_pred HHHHHcccCCCcccc
Q psy9514 590 FQEIKEKKLFDIYAI 604 (611)
Q Consensus 590 f~ei~~g~~~dis~~ 604 (611)
++++++|+.+....+
T Consensus 358 ~~k~~~g~~l~~~~~ 372 (402)
T 2hsa_B 358 VMRIKLNAPLNKYNR 372 (402)
T ss_dssp HHHHHHTCCCCCCCG
T ss_pred HHHHHhCCCCCCCCh
Confidence 999999987754433
No 8
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=2.2e-35 Score=315.20 Aligned_cols=289 Identities=13% Similarity=0.121 Sum_probs=216.3
Q ss_pred CCCcccccCeeecCcEEeccCCCC---------CCHHHHHHHHHcCCCEEEecCcccchhhcCCh-----------hhhH
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTV---------GNLPFRRLCKKWGADITCSEMAVATELLKSSP-----------QEWA 305 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~---------gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~~ 305 (611)
=|+|+++++++|+||++||||++. ++..++.++.+.|++||+|||+.+++...+.+ ..|.
T Consensus 5 Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~ 84 (364)
T 1vyr_A 5 LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWK 84 (364)
T ss_dssp TTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHH
T ss_pred cCCCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHH
Confidence 489999999999999999999975 45778889988899999999999886665532 2477
Q ss_pred hHh--hccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcch-h-----------hccCCCccccccccce
Q psy9514 306 LIK--RHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEF-I-----------YKQGSGSGLLQRANLF 371 (611)
Q Consensus 306 l~~--~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~-~-----------~~~~~~~~l~~~~~~~ 371 (611)
.+. .|..+.++++||+|.+...... +...+ ...+. ....|.+. . ......++|+.+++..
T Consensus 85 ~l~~~vh~~g~~i~~QL~H~Gr~~~~~----~~~~g-~~~~a-pS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~ 158 (364)
T 1vyr_A 85 KITAGVHAEDGRIAVQLWHTGRISHSS----IQPGG-QAPVS-ASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPG 158 (364)
T ss_dssp HHHHHHHHTTCCEEEEEECCTTSSCGG----GSGGG-CCCEE-SSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHH
T ss_pred HHHHHHHhcCCeEEEEeccCCcccCcc----cccCC-Ccccc-CCCcccccccccccccccccccCCCCCCcCCHHHHHH
Confidence 663 5888999999999877543211 00000 00000 00011000 0 0001223444444443
Q ss_pred eeecccCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcC-CCE
Q psy9514 372 GVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPI 441 (611)
Q Consensus 372 ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~Pv 441 (611)
.+++++++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++ .||
T Consensus 159 -------~i~~f~~aA~~a~-~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v 230 (364)
T 1vyr_A 159 -------IVNDFRQAVANAR-EAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRI 230 (364)
T ss_dssp -------HHHHHHHHHHHHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGE
T ss_pred -------HHHHHHHHHHHHH-HcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcE
Confidence 3578888888876 4699999999998 888999999999999999999999999999995 499
Q ss_pred EEEEEcc--ccC------CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhH
Q psy9514 442 TVKTRTG--IHK------DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFR 513 (611)
Q Consensus 442 tVKiR~g--~~~------~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~ 513 (611)
.|||+.+ +.. +.+++.+++++|+++|+++|++|+|+..+.
T Consensus 231 ~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-------------------------------- 278 (364)
T 1vyr_A 231 GIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-------------------------------- 278 (364)
T ss_dssp EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--------------------------------
T ss_pred EEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC--------------------------------
Confidence 9999976 221 234678899999999999999999763211
Q ss_pred hcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 514 DWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 514 ~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
. ...|.+++++.+. .++|||+||+| |+++++++++.| .||+|||||++|.||||++++
T Consensus 279 -----------------~--~~~~~~~~~v~~~-~~iPvi~~Ggi-t~~~a~~~l~~g-~aD~V~~gR~~l~~P~~~~~~ 336 (364)
T 1vyr_A 279 -----------------K--PYSEAFRQKVRER-FHGVIIGAGAY-TAEKAEDLIGKG-LIDAVAFGRDYIANPDLVARL 336 (364)
T ss_dssp -----------------C--CCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHH
T ss_pred -----------------C--cccHHHHHHHHHH-CCCCEEEECCc-CHHHHHHHHHCC-CccEEEECHHHHhChhHHHHH
Confidence 0 1235666666554 58999999999 999999999998 899999999999999999999
Q ss_pred HcccCCCcc
Q psy9514 594 KEKKLFDIY 602 (611)
Q Consensus 594 ~~g~~~dis 602 (611)
++|+.+...
T Consensus 337 ~~g~~l~~~ 345 (364)
T 1vyr_A 337 QKKAELNPQ 345 (364)
T ss_dssp HHTCCCCCC
T ss_pred HcCCCCCCC
Confidence 999876543
No 9
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=3e-35 Score=311.44 Aligned_cols=279 Identities=16% Similarity=0.123 Sum_probs=203.7
Q ss_pred CCCcccccCeeecCcEEeccCCCCCC----------HHHHHHHHHcCCCEEEecCcccchhhcCChh-----------hh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGN----------LPFRRLCKKWGADITCSEMAVATELLKSSPQ-----------EW 304 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gn----------lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~-----------e~ 304 (611)
=|+|+++++++|+||++||||++... +.|..-.++.|++||+||.+.+++..++.+. .|
T Consensus 4 Lf~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~ 83 (343)
T 3kru_A 4 LHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKEL 83 (343)
T ss_dssp GGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHH
T ss_pred ccccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHH
Confidence 48999999999999999999987422 2344444567999999999999887665442 34
Q ss_pred HhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHH
Q psy9514 305 ALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYV 382 (611)
Q Consensus 305 ~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~ 382 (611)
+.+ ..|..+.++++||+|.+..... .+...+- -.+++.........+|+.+++.-+ .+.
T Consensus 84 ~~~~~~vh~~G~~i~~QL~H~Gr~~~~---------~g~~~~a---pS~i~~~~~~~~p~~mt~~eI~~i-------i~~ 144 (343)
T 3kru_A 84 KKIVDICKANGAVMGIQLAHAGRKCNI---------SYEDVVG---PSPIKAGDRYKLPRELSVEEIKSI-------VKA 144 (343)
T ss_dssp HHHHHHHHHTTCEEEEEEECCGGGCCC---------TTSCCEE---SSSCCSSTTSCCCEECCHHHHHHH-------HHH
T ss_pred HHHHHHHhcCCceEeeehhhccCccCc---------chhhccC---CCcCCCCccccCchhcCHHHHHHH-------HHH
Confidence 433 3488888888999887643211 0000000 001111000112345555544433 467
Q ss_pred HHHHHHHHHHhcccceEEec---------cCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccc-c
Q psy9514 383 LTKCTQLLEEQMVVDFVDVN---------LGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGI-H 450 (611)
Q Consensus 383 ~~~aA~~l~~~~g~D~IELN---------~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~-~ 450 (611)
|++||+++.+ +|||+|||| +.||..|.+.+.||++|++|++++.+||++|+++++ .||.||++... .
T Consensus 145 f~~AA~~a~~-aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~ 223 (343)
T 3kru_A 145 FGEAAKRANL-AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYM 223 (343)
T ss_dssp HHHHHHHHHH-HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSS
T ss_pred HHHHHhhccc-cCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhh
Confidence 7777777753 699999999 669999999999999999999999999999999994 78999888631 1
Q ss_pred ---CCchHHHHHHHHHHHcCCCEEEEE-ccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 451 ---KDNNIIHNFMPKFRDWGASLITLH-GRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 451 ---~~~~~a~~la~~l~~aGvd~Itvh-gR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
.+.+++.++++.|+++ +|+|+|+ |+...+...
T Consensus 224 ~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~------------------------------------------- 259 (343)
T 3kru_A 224 EGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDIN------------------------------------------- 259 (343)
T ss_dssp TTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCC-------------------------------------------
T ss_pred ccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeec-------------------------------------------
Confidence 1346789999999999 9999994 654321100
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
.....++.+++++.+. .++|||+||+|+|+++++++++.| .||+||+||++|.||||+++++
T Consensus 260 ----~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~Ae~~l~~G-~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 260 ----LYPGYQVKYAETIKKR-CNIKTSAVGLITTQELAEEILSNE-RADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp ----CCTTTTHHHHHHHHHH-HTCEEEEESSCCCHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHTC
T ss_pred ----ccCceeehHHHHHHHh-cCcccceeeeeeHHHHHHHHHhch-hhHHHHHHHHHhcCCeEEEEEe
Confidence 1122356777776655 489999999999999999999998 8999999999999999999999
No 10
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-35 Score=320.92 Aligned_cols=294 Identities=12% Similarity=0.067 Sum_probs=209.5
Q ss_pred CCCcccc-cCeeecCcEEeccCCCCCC----H------HHHHHHHHcCCCEEEecCcccchhhcCCh-----------hh
Q psy9514 246 KIKNSEK-KKIDWQGKLYLSPLTTVGN----L------PFRRLCKKWGADITCSEMAVATELLKSSP-----------QE 303 (611)
Q Consensus 246 ~f~p~ei-~~l~l~nrivlAPMt~~gn----l------pfRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e 303 (611)
=|+|+++ ++++|+||++||||++... . .|..-.+. |++||+||.+.+++..++.+ ..
T Consensus 27 Lf~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~-G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~ 105 (419)
T 3l5a_A 27 LLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPG 105 (419)
T ss_dssp GGSCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SCSEEEEEEEESSGGGCCSTTCEECSSGGGHHH
T ss_pred cCCCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhc-CCcEEEecceEeCcccccCCCccccccHHHHHH
Confidence 5899999 9999999999999987421 1 22222223 89999999999988776644 23
Q ss_pred hHhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchH
Q psy9514 304 WALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPY 381 (611)
Q Consensus 304 ~~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~ 381 (611)
|..+ ..|..+.++++||+|.+.........- ....+.+.+..... ......+|+.+++.-+ .+
T Consensus 106 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~-~~~vapS~i~~~~~-------~~~~pr~mt~~eI~~i-------i~ 170 (419)
T 3l5a_A 106 LTNMASTMKQHGSLAIIQLAHAGRFSNQAILNF-GKVYGPSPMTLHSP-------IEHVVIAMSHEKINSI-------IQ 170 (419)
T ss_dssp HHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHH-SEEEESSCEEECSS-------SSEEEEECCHHHHHHH-------HH
T ss_pred HHHHHHHHHhcCCEEEEEeccCCCcccccccCC-CceeCCCCCccccC-------CCCCCccCCHHHHHHH-------HH
Confidence 4444 348889999999999876543322110 00011111211100 0011235555554443 45
Q ss_pred HHHHHHHHHHHhcccceEEeccCC---------Cccceecccccccc-ccChHHHHHHHHHHHhhc------CCCEEEEE
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGL-LQRANILQSVITCMNEVS------SLPITVKT 445 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaL-l~r~~~l~eIv~av~~~~------~~PvtVKi 445 (611)
.|++||+++. .+|||+||||++| |..|.+.+.||+++ ++|++++.+||++|++++ +.||.||+
T Consensus 171 ~F~~AA~rA~-~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRi 249 (419)
T 3l5a_A 171 QYRDATLRAI-KAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRA 249 (419)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHH-HcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEec
Confidence 7777887775 4699999999999 99999999999999 999999999999999988 35666666
Q ss_pred Eccc------cCCchHHHHHHHHHHH-cCCCEEEEEccccccc-cccCcChhHHHHHhhhcccCchhhhhcchhhHhcCC
Q psy9514 446 RTGI------HKDNNIIHNFMPKFRD-WGASLITLHGRTREQR-YTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGA 517 (611)
Q Consensus 446 R~g~------~~~~~~a~~la~~l~~-aGvd~ItvhgR~r~qr-~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~ 517 (611)
+... .-..+++.++++.|++ +|+|+|+||++...+. +..
T Consensus 250 s~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~--------------------------------- 296 (419)
T 3l5a_A 250 TPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTS--------------------------------- 296 (419)
T ss_dssp CSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBC---------------------------------
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCcccccccc---------------------------------
Confidence 5411 0134678899999999 9999999999864211 000
Q ss_pred ceEEeccccccccccCC-ccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 518 SLITLHGRTREQRYTKQ-ADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 518 ~~itihgrtr~g~~~~~-a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
.+.+. .++.+++.+.+... ++|||+||+|+|+++++++++. +|+||+||++|.||||++++++
T Consensus 297 ------------~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~---aDlVaiGR~~IanPdlv~ki~~ 361 (419)
T 3l5a_A 297 ------------RTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH---ADMVGMSSPFVTEPDFVHKLAE 361 (419)
T ss_dssp ------------CCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG---CSEEEESTHHHHCTTHHHHHHT
T ss_pred ------------CCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh---CCcHHHHHHHHHCcHHHHHHHc
Confidence 01111 13344555544433 6999999999999999999987 9999999999999999999999
Q ss_pred ccCCCcccc
Q psy9514 596 KKLFDIYAI 604 (611)
Q Consensus 596 g~~~dis~~ 604 (611)
|+..+|..|
T Consensus 362 G~~~~I~~c 370 (419)
T 3l5a_A 362 QRPHDINLE 370 (419)
T ss_dssp TCGGGCCCC
T ss_pred CCcccceec
Confidence 999999866
No 11
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=5.8e-35 Score=312.00 Aligned_cols=287 Identities=8% Similarity=0.038 Sum_probs=213.4
Q ss_pred CCCcccccCeeecCcEEeccCCCCC---------CHHHHHHHHHcCCCEEEecCcccchhhcCCh-----------hhhH
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG---------NLPFRRLCKKWGADITCSEMAVATELLKSSP-----------QEWA 305 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g---------nlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~~ 305 (611)
=|+|+++++++|+||++||||++.. +..++.++.+.|++||+|||+.+++...+.+ ..|.
T Consensus 5 Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~ 84 (365)
T 2gou_A 5 LFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWR 84 (365)
T ss_dssp GGSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHH
T ss_pred cCCCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHH
Confidence 4899999999999999999999763 4678888988899999999999887665542 2477
Q ss_pred hHh--hccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCc-c-hhh-----------ccCCCccccccccc
Q psy9514 306 LIK--RHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPI-E-FIY-----------KQGSGSGLLQRANL 370 (611)
Q Consensus 306 l~~--~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~-~-~~~-----------~~~~~~~l~~~~~~ 370 (611)
.+. .|..+.++++||+|.+....... . .+...+. .+..|. + ..+ .....++|+.+++.
T Consensus 85 ~l~~~vh~~g~~i~~QL~H~Gr~~~~~~---~---~g~~~~a-pS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~ 157 (365)
T 2gou_A 85 IVTEAVHAKGCAIFAQLWHVGRVTHPDN---I---DGQQPIS-SSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIA 157 (365)
T ss_dssp HHHHHHHHHSCEEEEEEECCTTSSCGGG---T---TTCCCEE-SSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHH
T ss_pred HHHHHHHhcCCeEEEEeecCCCcccccc---c---CCCCccC-CCCccccccccccccccccccccCCCCCCcCCHHHHH
Confidence 663 58889999999998764432110 0 0000000 000010 0 000 00112333333333
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCC-C
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL-P 440 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~-P 440 (611)
. ..++|+++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++. |
T Consensus 158 ~-------~i~~f~~aA~~a~-~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~p 229 (365)
T 2gou_A 158 Q-------VIADYRQAALNAM-EAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAER 229 (365)
T ss_dssp H-------HHHHHHHHHHHHH-HTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGG
T ss_pred H-------HHHHHHHHHHHHH-HcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCc
Confidence 2 3478888888876 4799999999998 8889999999999999999999999999999864 9
Q ss_pred EEEEEEcc-cc------CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhH
Q psy9514 441 ITVKTRTG-IH------KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFR 513 (611)
Q Consensus 441 vtVKiR~g-~~------~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~ 513 (611)
|.|||+.. +. ...+++.++++.|+++|+++|++|+++....
T Consensus 230 v~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-------------------------------- 277 (365)
T 2gou_A 230 VGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA-------------------------------- 277 (365)
T ss_dssp EEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--------------------------------
T ss_pred EEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC--------------------------------
Confidence 99999873 21 1235688999999999999999999762100
Q ss_pred hcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 514 DWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 514 ~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
....|++++++.+. .++|||+||+| |+++++++++.| .||+|||||++|.||||++++
T Consensus 278 -------------------~~~~~~~~~~i~~~-~~iPvi~~Ggi-~~~~a~~~l~~g-~aD~V~igR~~i~~P~l~~~~ 335 (365)
T 2gou_A 278 -------------------PDTPVSFKRALREA-YQGVLIYAGRY-NAEKAEQAINDG-LADMIGFGRPFIANPDLPERL 335 (365)
T ss_dssp -------------------CCCCHHHHHHHHHH-CCSEEEEESSC-CHHHHHHHHHTT-SCSEEECCHHHHHCTTHHHHH
T ss_pred -------------------CCccHHHHHHHHHH-CCCcEEEeCCC-CHHHHHHHHHCC-CcceehhcHHHHhCchHHHHH
Confidence 00135566666555 58999999999 999999999998 899999999999999999999
Q ss_pred HcccCCCc
Q psy9514 594 KEKKLFDI 601 (611)
Q Consensus 594 ~~g~~~di 601 (611)
++|+.+..
T Consensus 336 ~~g~~l~~ 343 (365)
T 2gou_A 336 RHGYPLAE 343 (365)
T ss_dssp HHTCCCCC
T ss_pred HcCCCCCC
Confidence 99987653
No 12
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=6e-35 Score=335.53 Aligned_cols=295 Identities=13% Similarity=0.139 Sum_probs=213.6
Q ss_pred CCCcccccCeeecCcEEeccCCCCCCH-------HHHHHHHHcCCCEEEecCcccchhhcCCh------------hhhHh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGNL-------PFRRLCKKWGADITCSEMAVATELLKSSP------------QEWAL 306 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gnl-------pfRrl~~~~Ga~li~tEm~~~~~l~~g~~------------~e~~l 306 (611)
=|+|+++++++|+||++||||++.... .|+..+++.|++||+|||+.+++...+.+ ..|..
T Consensus 14 lf~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (690)
T 3k30_A 14 LFEPVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKR 93 (690)
T ss_dssp GGCCCEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHH
T ss_pred cCCCeeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHH
Confidence 489999999999999999999875332 36777788999999999999987665432 23443
Q ss_pred H--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchh---hccCCCccccccccceeeecccCchH
Q psy9514 307 I--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFI---YKQGSGSGLLQRANLFGVQLCGNNPY 381 (611)
Q Consensus 307 ~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~---~~~~~~~~l~~~~~~~ivQi~g~~p~ 381 (611)
+ ..|..+.++++||+|.+...... . .+...+- -.+++.. +.....++|+.+++. ...+
T Consensus 94 ~~~~vh~~g~~i~~Ql~h~Gr~~~~~----~---~~~~~~~---ps~~~~~~~~~~~~~p~~~t~~ei~-------~~i~ 156 (690)
T 3k30_A 94 IADAIHEGGGLAGIELAHNGMNAPNQ----L---SRETPLG---PGHLPVAPDTIAPIQARAMTKQDID-------DLRR 156 (690)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCCT----T---TCCCCEE---SSSCBSCSSCCCSCBCEECCHHHHH-------HHHH
T ss_pred HHHHHHhcCCEEEEEccCCccccccc----c---cCCCccC---CCCCcccccccCCCCCCcCCHHHHH-------HHHH
Confidence 3 34888889999999877532110 0 0000000 0001100 001112344433333 3456
Q ss_pred HHHHHHHHHHHhcccceEEeccCCCc----------cceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVNLGCPI----------EFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK 451 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN~gCP~----------~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~ 451 (611)
.|++||+++. .+|||+||||++|++ .|.+.+.||++|++|++|+.+|+++|+++++.+++|.+|++..+
T Consensus 157 ~f~~aA~~a~-~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~ 235 (690)
T 3k30_A 157 WHRNAVRRSI-EAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEE 235 (690)
T ss_dssp HHHHHHHHHH-HHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCC
T ss_pred HHHHHHHHHH-HcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccc
Confidence 7788888876 469999999998765 78999999999999999999999999999987777777876543
Q ss_pred C------chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 452 D------NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 452 ~------~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
. .+++.++++.|++ |+|+|+||+++..... .+
T Consensus 236 ~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~--------------------------~~--------------- 273 (690)
T 3k30_A 236 EIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDS--------------------------VT--------------- 273 (690)
T ss_dssp CSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHT--------------------------CC---------------
T ss_pred cCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccC--------------------------CC---------------
Confidence 2 3568899999988 8999999987522110 00
Q ss_pred cccccccCCc-cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCcccc
Q psy9514 526 TREQRYTKQA-DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDIYAI 604 (611)
Q Consensus 526 tr~g~~~~~a-~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~dis~~ 604 (611)
.++.+.+ .+.+++++ ++..++|||+||+|+++++++++++.| .||+||+||++|.||||++++++|+..+|+.|
T Consensus 274 ---~~~~~~~~~~~~~~~i-~~~~~~pvi~~G~i~~~~~a~~~l~~g-~~d~v~~gR~~~~~P~~~~~~~~g~~~~i~~c 348 (690)
T 3k30_A 274 ---SRFAPEGRQEEFVAGL-KKLTTKPVVGVGRFTSPDAMVRQIKAG-ILDLIGAARPSIADPFLPNKIRDGRLNLIREC 348 (690)
T ss_dssp ---TTTCCTTTTHHHHTTS-GGGCSSCEEECSCCCCHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHHHTTCGGGCCCC
T ss_pred ---CccCCccccHHHHHHH-HHHcCCeEEEeCCCCCHHHHHHHHHCC-CcceEEEcHHhHhCccHHHHHHcCCccccccc
Confidence 0022222 34555444 455699999999999999999999998 89999999999999999999999999999877
Q ss_pred c
Q psy9514 605 V 605 (611)
Q Consensus 605 e 605 (611)
=
T Consensus 349 ~ 349 (690)
T 3k30_A 349 I 349 (690)
T ss_dssp C
T ss_pred c
Confidence 3
No 13
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=2.8e-34 Score=305.09 Aligned_cols=297 Identities=14% Similarity=0.091 Sum_probs=209.4
Q ss_pred CCCcccccCeeecCcEEeccCCCCCC----------HHHHHHHHHcCCCEEEecCcccchhhcCCh-----------hhh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGN----------LPFRRLCKKWGADITCSEMAVATELLKSSP-----------QEW 304 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gn----------lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~ 304 (611)
=|+|+++++++|+||++||||++... +.|..-.++.|++||+||.+.+++..++.+ ..|
T Consensus 4 Lf~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~ 83 (349)
T 3hgj_A 4 LFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGL 83 (349)
T ss_dssp GGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHH
T ss_pred CCCCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHH
Confidence 48999999999999999999997421 234444456799999999999988766544 234
Q ss_pred HhH--hhccCCCeEEEEecCCChhhHHHHHHHHhh-hccceeeeccCCCCcchhhccCCCccccccccceeeecccCchH
Q psy9514 305 ALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEE-QMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPY 381 (611)
Q Consensus 305 ~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~-~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~ 381 (611)
..+ ..|..+..+++||+|.+......... ... ..+...+- -.+++.........+|+.+++.- -.+
T Consensus 84 ~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~-~~~~~~~~~~~~---pS~~~~~~~~~~p~~mt~~eI~~-------ii~ 152 (349)
T 3hgj_A 84 KELARRIREAGAVPGIQLAHAGRKAGTARPW-EGGKPLGWRVVG---PSPIPFDEGYPVPEPLDEAGMER-------ILQ 152 (349)
T ss_dssp HHHHHHHHHTTCEEEEEEECCGGGCCBCCGG-GTCCBCCCCCEE---SSSCCSSTTCCCCEECCHHHHHH-------HHH
T ss_pred HHHHHHHHhCCCeEEEEeccCCccccccccc-cccccCCCcccC---CCcccccCCCCCCccCCHHHHHH-------HHH
Confidence 444 34888888888988876432100000 000 00000000 00111100011233455444443 456
Q ss_pred HHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccc-
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGI- 449 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~- 449 (611)
.|+++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|++++ +.||.||++...
T Consensus 153 ~f~~aA~~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~ 231 (349)
T 3hgj_A 153 AFVEGARRAL-RAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW 231 (349)
T ss_dssp HHHHHHHHHH-HTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC
T ss_pred HHHHHHHHHH-HcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 7888888876 4799999999999 99999999999999999999999999999999 478888887621
Q ss_pred ---cCCchHHHHHHHHHHHcCCCEEEEEc-cccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 450 ---HKDNNIIHNFMPKFRDWGASLITLHG-RTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 450 ---~~~~~~a~~la~~l~~aGvd~Itvhg-R~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
..+.+++.++++.|++.|+|+|+++. +..... ..+
T Consensus 232 ~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~-~~~---------------------------------------- 270 (349)
T 3hgj_A 232 GEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRV-RIP---------------------------------------- 270 (349)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSS-CCC----------------------------------------
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCccc-ccC----------------------------------------
Confidence 11346788999999999999999994 432110 000
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCcc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDIY 602 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~dis 602 (611)
.....++++++++.+. .++|||++|+|+|+++++++++.| .||+||+||++|.||+|+++++++-..++.
T Consensus 271 -----~~~~~~~~~~~~ir~~-~~iPVi~~Ggi~t~e~a~~~l~~G-~aD~V~iGR~~lanPdl~~k~~~~l~~~~~ 340 (349)
T 3hgj_A 271 -----LAPGFQVPFADAVRKR-VGLRTGAVGLITTPEQAETLLQAG-SADLVLLGRVLLRDPYFPLRAAKALGVAPE 340 (349)
T ss_dssp -----CCTTTTHHHHHHHHHH-HCCEEEECSSCCCHHHHHHHHHTT-SCSEEEESTHHHHCTTHHHHHHHHTTCCCC
T ss_pred -----CCccccHHHHHHHHHH-cCceEEEECCCCCHHHHHHHHHCC-CceEEEecHHHHhCchHHHHHHHHCCCCCC
Confidence 0112356677776665 489999999999999999999998 899999999999999999999987655543
No 14
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=4.7e-34 Score=304.83 Aligned_cols=295 Identities=10% Similarity=0.071 Sum_probs=206.1
Q ss_pred CCCcccccCeeecCcEEeccCCCCCC---------HHHHHHHHHcCCCEEEecCcccchhhcCChh-----------hhH
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGN---------LPFRRLCKKWGADITCSEMAVATELLKSSPQ-----------EWA 305 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gn---------lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~-----------e~~ 305 (611)
=|+|+++++++|+||++||||++... +-|..-.++.|++||+||.+.+++..++.+. .|+
T Consensus 4 Lf~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 83 (363)
T 3l5l_A 4 LFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFV 83 (363)
T ss_dssp GGSCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHH
T ss_pred cCCCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHH
Confidence 48999999999999999999997432 2344444567999999999999887665442 344
Q ss_pred hH--hhccCCCeEEEEecCCChhhHHHHHH----HH--hhhccceeeeccCCCCcchhhc-cCCCccccccccceeeecc
Q psy9514 306 LI--KRHESEDLFGVQLCGNNPYVLTKCTQ----LL--EEQMAVDFVDVNLGCPIEFIYK-QGSGSGLLQRANLFGVQLC 376 (611)
Q Consensus 306 l~--~~h~~e~~~~vQi~g~~p~~~~~~a~----~l--~~~~~v~~idln~gcp~~~~~~-~~~~~~l~~~~~~~ivQi~ 376 (611)
.+ ..|..+..+++||+|.+........- .+ ....+...+. -.+++.... .....+|+.+++.-
T Consensus 84 ~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~---pS~~~~~~~~~~~p~~mt~~eI~~----- 155 (363)
T 3l5l_A 84 PVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIA---PSAIAFGAHLPKVPREMTLDDIAR----- 155 (363)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEE---SSSCCCBTTBCCCCEECCHHHHHH-----
T ss_pred HHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccC---CCCCccCCCCCCCCccCCHHHHHH-----
Confidence 33 34888888899998876432100000 00 0000000000 001111000 11223454444443
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
-.+.|++||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++ .||.||+
T Consensus 156 --ii~~f~~aA~~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRi 232 (363)
T 3l5l_A 156 --VKQDFVDAARRAR-DAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARF 232 (363)
T ss_dssp --HHHHHHHHHHHHH-HHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEE
T ss_pred --HHHHHHHHHHHHH-HcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 3467777777775 3699999999985 999999999999999999999999999999995 6788888
Q ss_pred Ecccc-----CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceE
Q psy9514 446 RTGIH-----KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLI 520 (611)
Q Consensus 446 R~g~~-----~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~i 520 (611)
+.... .+.+++.++++.|+++|+|+|+|+++........+
T Consensus 233 s~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~----------------------------------- 277 (363)
T 3l5l_A 233 GVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIP----------------------------------- 277 (363)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCC-----------------------------------
T ss_pred cchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccC-----------------------------------
Confidence 76311 12357889999999999999999986421100000
Q ss_pred EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccC
Q psy9514 521 TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKL 598 (611)
Q Consensus 521 tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~ 598 (611)
.....++.+++.+.+. .++|||++|+|+|+++++++++.| .||+|++||++|.||+|+++++++..
T Consensus 278 ----------~~~~~~~~~~~~ir~~-~~iPVi~~GgI~s~e~a~~~l~~G-~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 278 ----------WGPAFMGPIAERVRRE-AKLPVTSAWGFGTPQLAEAALQAN-QLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp ----------CCTTTTHHHHHHHHHH-HTCCEEECSSTTSHHHHHHHHHTT-SCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred ----------CCcchhHHHHHHHHHH-cCCcEEEeCCCCCHHHHHHHHHCC-CccEEEecHHHHhCchHHHHHHHHcC
Confidence 0111246666666555 489999999999999999999998 89999999999999999999998754
No 15
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=6.6e-34 Score=302.91 Aligned_cols=286 Identities=13% Similarity=0.067 Sum_probs=200.1
Q ss_pred CCCcccccCeeecCcEEeccCCCCC----CHHHH----HHHHHcCCCEEEecCcccchhhcCCh-----------hhhHh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG----NLPFR----RLCKKWGADITCSEMAVATELLKSSP-----------QEWAL 306 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g----nlpfR----rl~~~~Ga~li~tEm~~~~~l~~g~~-----------~e~~l 306 (611)
=|+|+++++++|+||++||||++.. ..|-. .+..+..++||+||.+.+++..++.+ ..|+.
T Consensus 4 Lf~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~ 83 (362)
T 4ab4_A 4 LFDPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNN 83 (362)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHH
T ss_pred cCCCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHH
Confidence 4899999999999999999998742 12211 22222238999999999988766544 23444
Q ss_pred H--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCc-chh-hccCCCccccccccceeeecccCchHH
Q psy9514 307 I--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPI-EFI-YKQGSGSGLLQRANLFGVQLCGNNPYV 382 (611)
Q Consensus 307 ~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~-~~~-~~~~~~~~l~~~~~~~ivQi~g~~p~~ 382 (611)
+ ..|..+.++++||+|.+......... -....+.+.+... +.+. +.. .......+|+.+++.- -.+.
T Consensus 84 l~~avH~~G~~i~~QL~H~Gr~~~~~~~~-g~~~vapS~i~~~-~~~~~~~~~~~~~~pr~mt~~eI~~-------ii~~ 154 (362)
T 4ab4_A 84 VTKAVHAAGGRIFLQLWHVGRISHPSYLN-GELPVAPSAIQPK-GHVSLVRPLSDYPTPRALETEEIND-------IVEA 154 (362)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSCCGGGTT-TCCCEESSCCCCS-SBCSSCSSCCBCCCCEECCHHHHHH-------HHHH
T ss_pred HHHHHHhcCCEEEEEeccCcccccccccC-CCcccCCCCCCCC-ccccccccccCCCCCCcCCHHHHHH-------HHHH
Confidence 3 34888888999998876432211000 0000011111100 0000 000 0011223444444433 4467
Q ss_pred HHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCC-CEEEEEEcccc--
Q psy9514 383 LTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL-PITVKTRTGIH-- 450 (611)
Q Consensus 383 ~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~-PvtVKiR~g~~-- 450 (611)
|++||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++. ||.||++....
T Consensus 155 f~~AA~~a~-~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~ 233 (362)
T 4ab4_A 155 YRSGAENAK-AAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAH 233 (362)
T ss_dssp HHHHHHHHH-HTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHH-HcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccccc
Confidence 788888876 4699999999999 9999999999999999999999999999999963 89998886421
Q ss_pred -----CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 451 -----KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 451 -----~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
+..+++..+++.|+++|+++|+||++.. .
T Consensus 234 g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~-------------------------------------------- 267 (362)
T 4ab4_A 234 DMGDADRAETFTYVARELGKRGIAFICSREREA--D-------------------------------------------- 267 (362)
T ss_dssp SCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC--T--------------------------------------------
T ss_pred ccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC--C--------------------------------------------
Confidence 1134678999999999999999998751 0
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDI 601 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~di 601 (611)
. .+++++.+ ..++|||+||+| |+++++++++.| .||+||+||++|.||||++++++|..+..
T Consensus 268 -----~------~~~~~ik~-~~~iPvi~~Ggi-t~e~a~~~l~~g-~aD~V~iGR~~lanPdl~~k~~~g~~l~~ 329 (362)
T 4ab4_A 268 -----D------SIGPLIKE-AFGGPYIVNERF-DKASANAALASG-KADAVAFGVPFIANPDLPARLAADAPLNE 329 (362)
T ss_dssp -----T------CCHHHHHH-HHCSCEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHHHTTCCCCC
T ss_pred -----H------HHHHHHHH-HCCCCEEEeCCC-CHHHHHHHHHcC-CccEEEECHHhHhCcHHHHHHHcCCCCCC
Confidence 0 11233333 347899999999 999999999998 89999999999999999999999987754
No 16
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=7.2e-34 Score=302.52 Aligned_cols=286 Identities=12% Similarity=0.045 Sum_probs=200.7
Q ss_pred CCCcccccCeeecCcEEeccCCCCC----CHHHHHHHH----HcCCCEEEecCcccchhhcCCh-----------hhhHh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG----NLPFRRLCK----KWGADITCSEMAVATELLKSSP-----------QEWAL 306 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g----nlpfRrl~~----~~Ga~li~tEm~~~~~l~~g~~-----------~e~~l 306 (611)
-|+|+++++++|+||++||||++.. ..|-..+.. +..++||+||.+.+++..++.+ ..|+.
T Consensus 12 ~f~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~ 91 (361)
T 3gka_A 12 LFDPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRL 91 (361)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHH
T ss_pred ccCCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeecccccCCCCCCccCCHHHHHHHHH
Confidence 6999999999999999999998742 122222222 2237999999999988766543 23444
Q ss_pred H--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCc-chh-hccCCCccccccccceeeecccCchHH
Q psy9514 307 I--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPI-EFI-YKQGSGSGLLQRANLFGVQLCGNNPYV 382 (611)
Q Consensus 307 ~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~-~~~-~~~~~~~~l~~~~~~~ivQi~g~~p~~ 382 (611)
+ ..|..+.++++||+|.+......... -....+.+.+... +.+. +.. ......++|+.+++.- -.+.
T Consensus 92 l~~avH~~G~~i~~QL~H~Gr~~~~~~~~-g~~~vapS~i~~~-~~~~~~~g~~~~~~pr~mt~~eI~~-------ii~~ 162 (361)
T 3gka_A 92 VTDAVHAAGGRIFLQLWHVGRVSDPVFLD-GALPVAPSAIAPG-GHVSLVRPQRPYVTPRALELDEIPG-------VVAA 162 (361)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSCCGGGTT-TCCCEESSSCCCS-SBCSSCSSCCBCCCCEECCGGGHHH-------HHHH
T ss_pred HHHHHHhcCCeEEEeeccCCccccccccC-CCCcccCCCCCCC-CcccccccccCCCCCccCCHHHHHH-------HHHH
Confidence 4 34888888999998876432211000 0000001111000 0000 000 0011223444444443 4467
Q ss_pred HHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCC-CEEEEEEccc---
Q psy9514 383 LTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL-PITVKTRTGI--- 449 (611)
Q Consensus 383 ~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~-PvtVKiR~g~--- 449 (611)
|++||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++. ||.||++...
T Consensus 163 f~~AA~~A~-~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~ 241 (361)
T 3gka_A 163 FRRGAENAR-AAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAH 241 (361)
T ss_dssp HHHHHHHHH-HTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHH-HcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccC
Confidence 788888876 4699999999999 9999999999999999999999999999999964 8999888631
Q ss_pred --cC--CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 450 --HK--DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 450 --~~--~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.. ..+++..+++.|+++|+++|+||++.. .
T Consensus 242 g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~-------------------------------------------- 275 (361)
T 3gka_A 242 TMGDSDPAATFGHVARELGRRRIAFLFARESFG--G-------------------------------------------- 275 (361)
T ss_dssp SCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS--T--------------------------------------------
T ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC--C--------------------------------------------
Confidence 11 124678999999999999999998751 0
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDI 601 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~di 601 (611)
+ .+++++.+ ..++|||+||+| |+++++++++.| .||+||+||++|.||||++++++|..+..
T Consensus 276 --------~---~~~~~ik~-~~~iPvi~~Ggi-t~e~a~~~l~~G-~aD~V~iGR~~ladPdl~~k~~~g~~l~~ 337 (361)
T 3gka_A 276 --------D---AIGQQLKA-AFGGPFIVNENF-TLDSAQAALDAG-QADAVAWGKLFIANPDLPRRFKLNAPLNE 337 (361)
T ss_dssp --------T---CCHHHHHH-HHCSCEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHHCTTHHHHHHHTCCCCC
T ss_pred --------H---HHHHHHHH-HcCCCEEEeCCC-CHHHHHHHHHcC-CccEEEECHHhHhCcHHHHHHHhCCCCCC
Confidence 0 11233333 347899999999 999999999998 89999999999999999999999987754
No 17
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=1.9e-33 Score=321.95 Aligned_cols=292 Identities=13% Similarity=0.036 Sum_probs=213.0
Q ss_pred CCCcccccCeeecCcEEeccCCC-CCC--HHHHHHHH------HcCCCEEEecCcccchhhcCCh-----------hhhH
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTT-VGN--LPFRRLCK------KWGADITCSEMAVATELLKSSP-----------QEWA 305 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~-~gn--lpfRrl~~------~~Ga~li~tEm~~~~~l~~g~~-----------~e~~ 305 (611)
=|+|+++++++|+||++||||++ .++ .++++++. ++|++||+|||+.+++...+.+ ..|.
T Consensus 5 lf~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (671)
T 1ps9_A 5 LFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHR 84 (671)
T ss_dssp TTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHH
T ss_pred cCCCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHH
Confidence 48999999999999999999997 333 33444443 4599999999999876554432 2466
Q ss_pred hH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHH
Q psy9514 306 LI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVL 383 (611)
Q Consensus 306 l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~ 383 (611)
.+ ..|..+.++++||+|.+...... ...+.+.+ |.+. .....++|+.+++.- ..+.|
T Consensus 85 ~~~~~vh~~g~~i~~Ql~h~Gr~~~~~------~~~~ps~~------~~~~--~~~~p~~~t~~ei~~-------~i~~~ 143 (671)
T 1ps9_A 85 TITEAVHQEGGKIALQILHTGRYSYQP------HLVAPSAL------QAPI--NRFVPHELSHEEILQ-------LIDNF 143 (671)
T ss_dssp HHHHHHHHTTCCEEEEECCCGGGSBST------TCEESSSC------CCTT--CSSCCEECCHHHHHH-------HHHHH
T ss_pred HHHHHHHhcCCEEEEEeccCCcccCCC------CCcCCCCc------cccc--CCCCCccCCHHHHHH-------HHHHH
Confidence 55 35888899999999986432110 00011111 1110 011223444444332 34577
Q ss_pred HHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEcccc--
Q psy9514 384 TKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIH-- 450 (611)
Q Consensus 384 ~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~-- 450 (611)
+++|+++. .+|||+||||++| |..|.+.+.||++|++|++++.+|+++|++++| .||.||++....
T Consensus 144 ~~aA~~a~-~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~ 222 (671)
T 1ps9_A 144 ARCAQLAR-EAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE 222 (671)
T ss_dssp HHHHHHHH-HTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST
T ss_pred HHHHHHHH-HcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCC
Confidence 88888876 4699999999998 888999999999999999999999999999994 677778775211
Q ss_pred --CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccc
Q psy9514 451 --KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTRE 528 (611)
Q Consensus 451 --~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~ 528 (611)
.+.+++.++++.|+++|+++|++|+++.++.... .
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~-------------------------------------------~ 259 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTGIGWHEARIPT-------------------------------------------I 259 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCS-------------------------------------------S
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcCCCcccccccc-------------------------------------------c
Confidence 1345788999999999999999998764332100 0
Q ss_pred ccccCCcc-HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCcccc
Q psy9514 529 QRYTKQAD-WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDIYAI 604 (611)
Q Consensus 529 g~~~~~a~-~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~dis~~ 604 (611)
..+.+.+. +++++++ ++..++|||++|+|+|+++++++++.| .+|+||+||++|.||||++++++|+..+|..|
T Consensus 260 ~~~~~~~~~~~~~~~i-~~~~~iPvi~~Ggi~~~~~a~~~l~~g-~aD~V~~gR~~l~~P~l~~k~~~g~~~~~~~c 334 (671)
T 1ps9_A 260 ATPVPRGAFSWVTRKL-KGHVSLPLVTTNRINDPQVADDILSRG-DADMVSMARPFLADAELLSKAQSGRADEINTC 334 (671)
T ss_dssp STTSCTTTTHHHHHHH-TTSCSSCEEECSSCCSHHHHHHHHHTT-SCSEEEESTHHHHCTTHHHHHHTTCGGGCCCC
T ss_pred cccCCcchHHHHHHHH-HHhcCceEEEeCCCCCHHHHHHHHHcC-CCCEEEeCHHHHhCcHHHHHHHcCCCCCcccc
Confidence 00222233 4556665 445699999999999999999999998 89999999999999999999999999988854
No 18
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=2.3e-33 Score=324.30 Aligned_cols=297 Identities=14% Similarity=0.107 Sum_probs=212.4
Q ss_pred CCCcccccCeeecCcEEeccCCCC-C-CHHH-----HHHHHHcCCCEEEecCcccchhhcCCh------------hhhHh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTV-G-NLPF-----RRLCKKWGADITCSEMAVATELLKSSP------------QEWAL 306 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~-g-nlpf-----Rrl~~~~Ga~li~tEm~~~~~l~~g~~------------~e~~l 306 (611)
=|+|+++++++|+||++||||++. + +.|. .+..+++|++||+||++.+++...+.+ ..|..
T Consensus 9 Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (729)
T 1o94_A 9 LFEPIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKA 88 (729)
T ss_dssp GGSCEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHH
T ss_pred cCCCeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHH
Confidence 589999999999999999999875 2 3452 222236799999999999976554432 24665
Q ss_pred H--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHH
Q psy9514 307 I--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLT 384 (611)
Q Consensus 307 ~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~ 384 (611)
+ ..|..+.++++||+|.+....... .+...+- .+..|.+. ......++|+.+++. ...+.|+
T Consensus 89 ~~~~vh~~g~~i~~Ql~h~Gr~~~~~~-------~~~~~~~-ps~~~~~~-~~~~~p~~~t~~eI~-------~~i~~f~ 152 (729)
T 1o94_A 89 MTDEVHKYGALAGVELWYGGAHAPNME-------SRATPRG-PSQYASEF-ETLSYCKEMDLSDIA-------QVQQFYV 152 (729)
T ss_dssp HHHHHHTTTCEEEEEEECCGGGSCCTT-------TCCCCEE-SSCCBCSS-STTCBCEECCHHHHH-------HHHHHHH
T ss_pred HHHHHHhCCCeEEEEecCCCccccccc-------cCCCCcC-CCcccccc-cCCCCCCcCCHHHHH-------HHHHHHH
Confidence 5 358889999999999764321100 0000000 00001000 000112334333332 3457788
Q ss_pred HHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEcc-----
Q psy9514 385 KCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTG----- 448 (611)
Q Consensus 385 ~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g----- 448 (611)
+||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+|+++|++++ +.||.||++..
T Consensus 153 ~aA~~a~-~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~ 231 (729)
T 1o94_A 153 DAAKRSR-DAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGP 231 (729)
T ss_dssp HHHHHHH-HTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCT
T ss_pred HHHHHHH-HcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCC
Confidence 8888886 4799999999999 99999999999999999999999999999999 57888888752
Q ss_pred --ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 449 --IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 449 --~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
++. .+++.++++.|++ |+|+|+||++.... |. +.+
T Consensus 232 ~G~~~-~~~~~~~~~~l~~-~~d~~~v~~g~~~~-------~~----------------------------------~~~ 268 (729)
T 1o94_A 232 GQIEA-EVDGQKFVEMADS-LVDMWDITIGDIAE-------WG----------------------------------EDA 268 (729)
T ss_dssp TSCCT-TTHHHHHHHHHGG-GCSEEEEEECCSTT-------GG----------------------------------GTS
T ss_pred CCCCc-hHHHHHHHHHHHh-hcCEEEEeeecccc-------cc----------------------------------ccc
Confidence 210 3467889999987 79999999875210 10 000
Q ss_pred ccccccCCc-cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCCcccc
Q psy9514 527 REQRYTKQA-DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFDIYAI 604 (611)
Q Consensus 527 r~g~~~~~a-~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~dis~~ 604 (611)
....+.+.+ ++.+++++.+ ..++|||+||+|+|+++++++++.| .||+||+||++|.||||++++++|+..+|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~i~~-~~~~pvi~~G~i~~~~~a~~~l~~g-~aD~V~~gR~~l~~P~~~~~~~~g~~~~~~~c 345 (729)
T 1o94_A 269 GPSRFYQQGHTIPWVKLVKQ-VSKKPVLGVGRYTDPEKMIEIVTKG-YADIIGCARPSIADPFLPQKVEQGRYDDIRVC 345 (729)
T ss_dssp CCTTTCCTTTTHHHHHHHHT-TCSSCEECCSCCCCHHHHHHHHHTT-SCSBEEESHHHHHCTTHHHHHHTTCGGGCCCC
T ss_pred CCccccCccccHHHHHHHHH-HCCCEEEEeCCCCCHHHHHHHHHCC-CCCEEEeCchhhcCchHHHHHHcCCccccccc
Confidence 000133333 4666666654 4699999999999999999999998 89999999999999999999999999999866
No 19
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=100.00 E-value=1.3e-33 Score=303.79 Aligned_cols=293 Identities=13% Similarity=0.094 Sum_probs=202.4
Q ss_pred CCCcccccCeeecCcEEeccCCCCC----CHH------HHHHHHHcCCCEEEecCcccchhhcCChh------------h
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG----NLP------FRRLCKKWGADITCSEMAVATELLKSSPQ------------E 303 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g----nlp------fRrl~~~~Ga~li~tEm~~~~~l~~g~~~------------e 303 (611)
=|+|+++++++|+||++||||++.. ..| |..-.++.|++||+||.+.+++..++.+. .
T Consensus 14 Lf~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~ 93 (407)
T 3tjl_A 14 AFQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKA 93 (407)
T ss_dssp GGSCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHH
T ss_pred CCCCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHH
Confidence 5999999999999999999998632 222 22222345899999999999877665433 3
Q ss_pred hHhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcch------hhccCCCccccccccceeeec
Q psy9514 304 WALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEF------IYKQGSGSGLLQRANLFGVQL 375 (611)
Q Consensus 304 ~~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~------~~~~~~~~~l~~~~~~~ivQi 375 (611)
|..+ ..|..+..+++||+|.+....... .... +...+.- +..|.+. .......++|+.+++.-++
T Consensus 94 ~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~---~~~~-g~~~vap-S~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii-- 166 (407)
T 3tjl_A 94 WKVITDKVHANGSFVSTQLIFLGRVADPAV---MKTR-GLNPVSA-SATYESDAAKEAAEAVGNPVRALTTQEVKDLV-- 166 (407)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGSCHHH---HHHT-TCCCEES-SSCCSSHHHHHHHHHTTCCCEECCHHHHHHHH--
T ss_pred HHHHHHHHHhcCCEEEEEeccCCCccchhh---cccC-CCcccCC-CCcccccccccccccCCCCCCcCCHHHHHHHH--
Confidence 4444 348889999999998875433221 1110 0111100 0011100 0011233455555554443
Q ss_pred ccCchHH-HHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEE
Q psy9514 376 CGNNPYV-LTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVK 444 (611)
Q Consensus 376 ~g~~p~~-~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVK 444 (611)
+. |++||+++. .+|||+||||++| |..|.+.+.||++|++|++++.+||++|+++++ .||.||
T Consensus 167 -----~~~~~~aa~~a~-~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r 240 (407)
T 3tjl_A 167 -----YEAYTNAAQKAM-DAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIR 240 (407)
T ss_dssp -----HTHHHHHHHHHH-HTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred -----HHHHHHHHHHHH-HhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEE
Confidence 45 667777765 4699999999999 999999999999999999999999999999997 478877
Q ss_pred EEccc-----cC--C----chHHHHHHHHH---HHcC--CCEEEEE-ccccccccccCcChhHHHHHhhhcccCchhhhh
Q psy9514 445 TRTGI-----HK--D----NNIIHNFMPKF---RDWG--ASLITLH-GRTREQRYTKQADWDYIEKCAQLCSRDNNIIHN 507 (611)
Q Consensus 445 iR~g~-----~~--~----~~~a~~la~~l---~~aG--vd~Itvh-gR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~ 507 (611)
++... .. + .+....+++.| .+.| +++|+|| +|...+.+. .+.
T Consensus 241 ~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~-~~~-------------------- 299 (407)
T 3tjl_A 241 ISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDV-SEE-------------------- 299 (407)
T ss_dssp ECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEEC-CGG--------------------
T ss_pred ECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcC-Ccc--------------------
Confidence 76411 11 2 34578899999 8899 9999999 555332210 000
Q ss_pred cchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHc---CCCccEEEEcHHhh
Q psy9514 508 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKK---SPSISGVMIGRGAL 584 (611)
Q Consensus 508 ~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~---G~~aD~VmIGRgaL 584 (611)
+ .|..+..+.+ ..++|||+||+|.+.+++.++++. | ++|+||+||++|
T Consensus 300 -----------------------~----~~~~~~~ir~-~~~~PvI~~Ggi~~~~dA~~~i~~~~~g-~aDlVa~GR~~i 350 (407)
T 3tjl_A 300 -----------------------D----QAGDNEFVSK-IWKGVILKAGNYSYDAPEFKTLKEDIAD-KRTLVGFSRYFT 350 (407)
T ss_dssp -----------------------G----CCCCSHHHHH-HCCSEEEEESCGGGGTTTTHHHHHHHTT-SSEEEECSHHHH
T ss_pred -----------------------c----hhHHHHHHHH-HhCCCEEecCCCCCHHHHHHHHHhhccC-CCeEEEeChhhh
Confidence 1 1112222222 347899999999999988888876 7 799999999999
Q ss_pred hCCchHHHHHcccCCCc
Q psy9514 585 IKPWIFQEIKEKKLFDI 601 (611)
Q Consensus 585 ~dP~lf~ei~~g~~~di 601 (611)
.||||++++++|..+..
T Consensus 351 aNPdL~~ri~~g~~l~~ 367 (407)
T 3tjl_A 351 SNPNLVWKLRDGIDLVP 367 (407)
T ss_dssp HCTTHHHHHHHTCCBCC
T ss_pred hCchHHHHHHcCCCCCC
Confidence 99999999999987653
No 20
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=100.00 E-value=1.9e-32 Score=293.74 Aligned_cols=294 Identities=10% Similarity=0.101 Sum_probs=208.0
Q ss_pred CCCcccccCeeecCcEEeccCCCCC-----CHHH-HHHH----HHcCCCEEEecCcccchhhcCCh-----------hhh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG-----NLPF-RRLC----KKWGADITCSEMAVATELLKSSP-----------QEW 304 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g-----nlpf-Rrl~----~~~Ga~li~tEm~~~~~l~~g~~-----------~e~ 304 (611)
=|+|+++++++|+||++||||++.. ..|- ..+. .+-|++||+||.+.+++..++.+ ..|
T Consensus 7 Lf~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~~ 86 (379)
T 3aty_A 7 LLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEW 86 (379)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTTSSEEEEEEEESSTTCCSSSSCCBSSSHHHHHHH
T ss_pred cCCCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhCCCeEEECceecccccccCCCCCCcCCHHHHHHH
Confidence 5999999999999999999998632 2333 3333 23389999999999987666543 235
Q ss_pred HhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhh-cccee-----eeccCCCCcch----hh--------ccCCCccc
Q psy9514 305 ALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQ-MAVDF-----VDVNLGCPIEF----IY--------KQGSGSGL 364 (611)
Q Consensus 305 ~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~-~~v~~-----idln~gcp~~~----~~--------~~~~~~~l 364 (611)
..+ ..|..+.++++||+|.+....... .+... .+... +. .+..|.+. .+ .....++|
T Consensus 87 k~~~~avh~~G~~i~~QL~H~Gr~~~~~~--~~~~~~~g~~~~~~~~~a-pS~i~~~~~~~~~~~~~~g~~~~~~~pr~l 163 (379)
T 3aty_A 87 RKIVDAVHKKGGLIFLQLIHAGRAGIPEK--ILQQSKSDQDPLAGRLLA-ASAIPIKDHRIPAYFAASGEKETYGVPEEL 163 (379)
T ss_dssp HHHHHHHHHTTCCEEEEEECCGGGSCHHH--HTTSCCCSSSTTTTCCEE-SSSCCCCSCCBCTTTSTTSSCBCCCCCEEC
T ss_pred HHHHHHHHhcCCEEEEEeccCCcccCccc--ccccccCCCCCccCcccC-CCCCccccccccccccccccccCCCCCccC
Confidence 544 348889999999999875543210 01100 00000 00 00011100 00 00122344
Q ss_pred cccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCC---------Ccccee-cccccc-ccccChHHHHHHHHHH
Q psy9514 365 LQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIY-KQGSGS-GLLQRANILQSVITCM 433 (611)
Q Consensus 365 ~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~-~~g~Gs-aLl~r~~~l~eIv~av 433 (611)
+.+++. ...+++|+++|+++.+.+|||+||||++| |..|.+ .+.||+ +|++|++++.+||++|
T Consensus 164 t~~eI~------~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aV 237 (379)
T 3aty_A 164 TDDEVR------DGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSV 237 (379)
T ss_dssp CHHHHH------HTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHH
T ss_pred CHHHHh------HHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHH
Confidence 444443 04467888999888635799999999997 888888 999999 9999999999999999
Q ss_pred HhhcC-CCEEEEEEccc-------cCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhh
Q psy9514 434 NEVSS-LPITVKTRTGI-------HKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNII 505 (611)
Q Consensus 434 ~~~~~-~PvtVKiR~g~-------~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~ 505 (611)
+++++ .||.|||+... ....+++.++++.|++.|+++|++|+++....
T Consensus 238 r~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~------------------------ 293 (379)
T 3aty_A 238 CDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQ------------------------ 293 (379)
T ss_dssp HHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSC------------------------
T ss_pred HHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCC------------------------
Confidence 99996 47888887631 11235688999999999999999998752100
Q ss_pred hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 506 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 506 ~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
.+ + .+ ++++.+ ..++|||++|+| |+++++++++.| .||+|||||++|.
T Consensus 294 ------------------------~~---~-~~-~~~ir~-~~~iPvi~~G~i-t~~~a~~~l~~g-~aD~V~igR~~l~ 341 (379)
T 3aty_A 294 ------------------------QI---G-DV-VAWVRG-SYSGVKISNLRY-DFEEADQQIREG-KVDAVAFGAKFIA 341 (379)
T ss_dssp ------------------------CC---C-CH-HHHHHT-TCCSCEEEESSC-CHHHHHHHHHTT-SCSEEEESHHHHH
T ss_pred ------------------------Cc---c-HH-HHHHHH-HCCCcEEEECCC-CHHHHHHHHHcC-CCeEEEecHHHHh
Confidence 01 1 13 455444 468999999999 999999999998 8999999999999
Q ss_pred CCchHHHHHcccCCCcccc
Q psy9514 586 KPWIFQEIKEKKLFDIYAI 604 (611)
Q Consensus 586 dP~lf~ei~~g~~~dis~~ 604 (611)
||||++++++|..+....+
T Consensus 342 ~P~l~~k~~~g~~l~~~~~ 360 (379)
T 3aty_A 342 NPDLVERAQQNWPLNEPRP 360 (379)
T ss_dssp CTTHHHHHHHTCCCCCCCG
T ss_pred CcHHHHHHHcCCCCCCCCH
Confidence 9999999999987754433
No 21
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.97 E-value=1.6e-30 Score=277.15 Aligned_cols=292 Identities=12% Similarity=0.063 Sum_probs=195.5
Q ss_pred CCCcccccCeeecCcEEeccCCCCC----C----HHHHHHHHHcCCCEEEecCcccchhhcCChh-----------hhHh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVG----N----LPFRRLCKKWGADITCSEMAVATELLKSSPQ-----------EWAL 306 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~g----n----lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~-----------e~~l 306 (611)
=|+|+++++++|+||++||||++.. . .....+..+.++|||+||.+.+++..++.+. .|..
T Consensus 4 LF~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~ 83 (358)
T 4a3u_A 4 LFDPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLP 83 (358)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHH
T ss_pred CCCCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECccccCCCCCcccCchHhHHHHHH
Confidence 3899999999999999999998632 1 2233333444789999999999887666542 3443
Q ss_pred H--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCC-CcchhhccCCCccccccccceeeecccCchHHH
Q psy9514 307 I--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGC-PIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVL 383 (611)
Q Consensus 307 ~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gc-p~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~ 383 (611)
+ ..|..+.++++||+|.+......... ....+.+.+...... ...........++|+.+++.- -.+.|
T Consensus 84 l~~avh~~G~~i~~QL~H~Gr~~~~~~~g--~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~-------ii~~F 154 (358)
T 4a3u_A 84 ITQAVHDAGGLIFAQLWHMGRMVPSNVSG--MQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPR-------LLDDY 154 (358)
T ss_dssp HHHHHHHTTCCEEEEEECCGGGCCHHHHS--SCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHH-------HHHHH
T ss_pred HHHHHHhcCCceeeccccccccccccccc--cCCCCCcccccCCcccccCCCCCCccCccCCHHHHHH-------HHHHH
Confidence 3 34888899999999887543221100 000011111110000 000000001123444444443 34677
Q ss_pred HHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC---
Q psy9514 384 TKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK--- 451 (611)
Q Consensus 384 ~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~--- 451 (611)
++||+++. .+|||+||||++| |..|.|++.||+++.+|.+|+.+||++|+++++..+ |-+|++..+
T Consensus 155 ~~AA~rA~-~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~-v~vRls~~~~~~ 232 (358)
T 4a3u_A 155 EKAARHAL-KAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKER-TAVRLSPNGEIQ 232 (358)
T ss_dssp HHHHHHHH-HTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGG-EEEEECCSSCBT
T ss_pred HHHHHHHH-HcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccc-eEEEeccCcccC
Confidence 88888876 4799999999997 999999999999999999999999999999997433 345654332
Q ss_pred ------CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 452 ------DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 452 ------~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.......+++.+.+.|++.++++.......+
T Consensus 233 g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------------------------------- 269 (358)
T 4a3u_A 233 GTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTF------------------------------------------- 269 (358)
T ss_dssp TBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSS-------------------------------------------
T ss_pred CCcccchHHHHHHHHHhhhccCccccccccccccCcc-------------------------------------------
Confidence 1234567788899999999999876432110
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcccCCC
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKKLFD 600 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~~~d 600 (611)
.. .....++..+++...+||+ .|++++++.++++|+.| .+|+|++||++|+||+|++++++|+.+.
T Consensus 270 ------~~-~~~~~~a~~ik~~~~~~v~-~~g~~~~~~ae~~l~~G-~aD~V~~gR~~ladPdlp~k~~~g~pl~ 335 (358)
T 4a3u_A 270 ------GK-TDQPKLSPEIRKVFKPPLV-LNQDYTFETAQAALDSG-VADAISFGRPFIGNPDLPRRFFEKAPLT 335 (358)
T ss_dssp ------SB-CSSCCCHHHHHHHCCSCEE-EESSCCHHHHHHHHHHT-SCSEEEESHHHHHCTTHHHHHHHTCCCC
T ss_pred ------cc-cccHHHHHHHHHhcCCcEE-EeCCCCHHHHHHHHHcC-CceEeHhhHHHHhChhHHHHHHhCCCCC
Confidence 00 0000112223344566776 56678999999999998 8999999999999999999999999774
No 22
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.96 E-value=6.5e-29 Score=268.32 Aligned_cols=294 Identities=13% Similarity=0.083 Sum_probs=190.3
Q ss_pred CCCcccccCeeecCcEEeccCCCC-----CC-------HHHHHHHHHcCCCEEEecCcccchhhcCChh-----------
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTV-----GN-------LPFRRLCKKWGADITCSEMAVATELLKSSPQ----------- 302 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~-----gn-------lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~----------- 302 (611)
=|+|+++++++|+||+|||||++. |+ +.|..-.++.|++||+||.+.+++..++.+.
T Consensus 17 LF~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~ 96 (400)
T 4gbu_A 17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMV 96 (400)
T ss_dssp GGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHH
T ss_pred CCCCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHH
Confidence 399999999999999999999863 22 2234444567999999999999887766542
Q ss_pred hhHhH--hhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCC------cchhhccCCCccccccccceeee
Q psy9514 303 EWALI--KRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCP------IEFIYKQGSGSGLLQRANLFGVQ 374 (611)
Q Consensus 303 e~~l~--~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp------~~~~~~~~~~~~l~~~~~~~ivQ 374 (611)
.|..+ ..|..+..+++||.|.+....... +...+ ...+......+ ..........++|+.+++.-+
T Consensus 97 ~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~---~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~i-- 170 (400)
T 4gbu_A 97 EWTKIFNAIHEKKSFVWVQLAVLGWAAFPDN---LARDG-LRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQY-- 170 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGSCHHH---HHHTT-CCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHH--
T ss_pred HHHHHHHHHHhcCCceEEeeeecCcccCccc---cccCC-CcccCccccccCCCCcccccccCCCCCccCCHHHHHHH--
Confidence 34433 348889999999998875433221 11111 11110000000 000001112335555454433
Q ss_pred cccCchHHHHHHHHHHHHhcccceEEeccCC---------CccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEE
Q psy9514 375 LCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC---------PIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVK 444 (611)
Q Consensus 375 i~g~~p~~~~~aA~~l~~~~g~D~IELN~gC---------P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVK 444 (611)
.+.|++||+++. .+|||+||||++| |..|.|++.||+++.||.+|+.|||++|+++++ .||.
T Consensus 171 -----i~~F~~AA~rA~-~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vg-- 242 (400)
T 4gbu_A 171 -----IKEYVQAAKNSI-AAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVG-- 242 (400)
T ss_dssp -----HHHHHHHHHHHH-HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEE--
T ss_pred -----HHHHHHHHHHHH-hcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEE--
Confidence 456777777775 4799999999998 999999999999999999999999999999996 4554
Q ss_pred EEccccCC------------chHHHHHHHHHHHcC-----CCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhh
Q psy9514 445 TRTGIHKD------------NNIIHNFMPKFRDWG-----ASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHN 507 (611)
Q Consensus 445 iR~g~~~~------------~~~a~~la~~l~~aG-----vd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~ 507 (611)
+|++..+. ......++..|...+ .+.+++........+...
T Consensus 243 vRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 300 (400)
T 4gbu_A 243 LRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTE---------------------- 300 (400)
T ss_dssp EEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCT----------------------
T ss_pred EEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCccccc----------------------
Confidence 55543221 123445555555432 344444332111000000
Q ss_pred cchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 508 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 508 ~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
..+.|... .... +++..++|||++|+|.+..++.+.+..+ ++|+|.+||++|+||
T Consensus 301 -------------------~~~~~~~~-~~~~----ir~~~~~pvi~~G~~~~~~~~~~~~~~~-~aDlV~~gR~~iadP 355 (400)
T 4gbu_A 301 -------------------GEGEYEGG-SNDF----VYSIWKGPVIRAGNFALHPEVVREEVKD-KRTLIGYGRFFISNP 355 (400)
T ss_dssp -------------------TTTCCCSC-CSTH----HHHHCCSCEEEESSCTTCHHHHHHHTTS-TTEEEECCHHHHHCT
T ss_pred -------------------ccchhhhH-HHHH----HHHHhCCCEEEeCCCCChHHHHHHHHcC-CCeEhHHHHHHHHCc
Confidence 00001111 1112 3445689999999999888888777777 799999999999999
Q ss_pred chHHHHHcccCCC
Q psy9514 588 WIFQEIKEKKLFD 600 (611)
Q Consensus 588 ~lf~ei~~g~~~d 600 (611)
+|++++++|+.+.
T Consensus 356 dl~~k~~~G~pl~ 368 (400)
T 4gbu_A 356 DLVDRLEKGLPLN 368 (400)
T ss_dssp THHHHHHHTCCCB
T ss_pred HHHHHHHcCCCCC
Confidence 9999999999774
No 23
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.95 E-value=5.6e-27 Score=244.59 Aligned_cols=271 Identities=11% Similarity=0.058 Sum_probs=192.8
Q ss_pred cccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEec-------
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLC------- 321 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~------- 321 (611)
|.++.+++|+|++++||.+...+.++++.+.++|+++++|+|+...+.. +.+. +-..++.
T Consensus 3 ~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~-gn~~------------pr~~~~~~~~in~~ 69 (311)
T 1jub_A 3 NTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKRE-GNPL------------PRYVDLELGSINSM 69 (311)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBC-CSCS------------CCEEEETTEEEECC
T ss_pred ceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccC-CCCC------------CcEEecccceeecC
Confidence 5788999999999999866335899999999999999999999987642 2211 1111211
Q ss_pred CCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCcccccc--ccceeeecccCchHHHHHHHHHHHHhcccc-e
Q psy9514 322 GNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQR--ANLFGVQLCGNNPYVLTKCTQLLEEQMVVD-F 398 (611)
Q Consensus 322 g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~--~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D-~ 398 (611)
|-.........+.+.. ..... +.++++|++|.+++++.++++++.+ .|+| +
T Consensus 70 g~~~~g~~~~~~~~~~-------------------------~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~-~g~d~~ 123 (311)
T 1jub_A 70 GLPNLGFDYYLDYVLK-------------------------NQKENAQEGPIFFSIAGMSAAENIAMLKKIQE-SDFSGI 123 (311)
T ss_dssp CCCBSCHHHHHHHHHH-------------------------HHHHTCSSSCCEEEECCSSHHHHHHHHHHHHH-SCCCSE
T ss_pred CCCCccHHHHHHHHHH-------------------------HHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHh-cCCCeE
Confidence 1000001110011100 00011 4688999999999999999999974 6899 9
Q ss_pred EEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccc
Q psy9514 399 VDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTR 478 (611)
Q Consensus 399 IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r 478 (611)
||||++||. . . .|..|..+++.+.++++++++.+++||+||++.++ +.....++++.++++|+|+|++|+++.
T Consensus 124 iein~~~P~---~-~-g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~--~~~~~~~~a~~~~~~G~d~i~v~~~~~ 196 (311)
T 1jub_A 124 TELNLSCPN---V-P-GEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF--DLVHFDIMAEILNQFPLTYVNSVNSIG 196 (311)
T ss_dssp EEEESCCCC---S-S-SCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC--SHHHHHHHHHHHTTSCCCEEEECCCEE
T ss_pred EEEeccCCC---C-C-CcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCC--CHHHHHHHHHHHHHcCCcEEEecCCCC
Confidence 999999995 3 2 25677778999999999999999999999999775 335677889999999999999999863
Q ss_pred ccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC----ccHHHHHHHHhhCC-CCcEE
Q psy9514 479 EQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ----ADWDYIEKCAQLCS-PAPLY 553 (611)
Q Consensus 479 ~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~----a~~~~i~~~~k~~~-~iPVI 553 (611)
..... +.. . ....++.....+.+++. ..|++++++.+... ++|||
T Consensus 197 ~g~~i---~~~---------------~------------~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi 246 (311)
T 1jub_A 197 NGLFI---DPE---------------A------------ESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQII 246 (311)
T ss_dssp EEECE---ETT---------------T------------TEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEE
T ss_pred cCcee---ccC---------------C------------CCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEE
Confidence 21100 000 0 00000000011223333 34788888876543 89999
Q ss_pred EecCCCCHHHHHHHHHcCCCccEEEEcHHhhh-CCchHHHHHccc
Q psy9514 554 GNGDILSYEDYTESLKKSPSISGVMIGRGALI-KPWIFQEIKEKK 597 (611)
Q Consensus 554 gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~-dP~lf~ei~~g~ 597 (611)
++|||.|++|+.+++..| ||+|||||+++. +||+|++|+++.
T Consensus 247 ~~GGI~~~~da~~~l~~G--Ad~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 247 GTGGIETGQDAFEHLLCG--ATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp EESSCCSHHHHHHHHHHT--CSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcC--CCEEEEchHHHhcCcHHHHHHHHHH
Confidence 999999999999999987 999999999997 999999998764
No 24
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.95 E-value=2e-26 Score=240.75 Aligned_cols=271 Identities=11% Similarity=0.083 Sum_probs=193.4
Q ss_pred cccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEec-------
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLC------- 321 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~------- 321 (611)
|.++.+++|+|++++|+++...+..+++.+.++|+++++|+|+...+.. +.+. .+ ..++.
T Consensus 5 ~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~-gn~~----------pr--~~~~~~~~in~~ 71 (314)
T 2e6f_A 5 KLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRD-GNPE----------PR--YMAFPLGSINSM 71 (314)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBC-CSCS----------CC--EEEETTEEEECC
T ss_pred ceEECCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccC-CCCC----------Cc--EEecccceeecC
Confidence 6789999999999999987335788888899999999999999988642 2211 11 11111
Q ss_pred CCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccc---e
Q psy9514 322 GNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVD---F 398 (611)
Q Consensus 322 g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D---~ 398 (611)
|-.........+.+... ....+.++++|++|.+++++.++++++.+ .|+| +
T Consensus 72 g~~~~g~~~~~~~~~~~-------------------------~~~~~~p~~~~i~g~~~~~~~~~a~~~~~-~g~d~~~~ 125 (314)
T 2e6f_A 72 GLPNLGFDFYLKYASDL-------------------------HDYSKKPLFLSISGLSVEENVAMVRRLAP-VAQEKGVL 125 (314)
T ss_dssp CCCBSCHHHHHHHHHHT-------------------------CCTTTCCEEEEECCSSHHHHHHHHHHHHH-HHHHHCCE
T ss_pred CCCCcCHHHHHHHHHHH-------------------------hhcCCCcEEEEeCCCCHHHHHHHHHHHHH-hCCCcCce
Confidence 10000011111111110 00024688999999999999999999975 5899 9
Q ss_pred EEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcC-CCEEEEEccc
Q psy9514 399 VDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWG-ASLITLHGRT 477 (611)
Q Consensus 399 IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aG-vd~ItvhgR~ 477 (611)
||||++||. . . .|..+..+++.+.++++++++.+++||+||++.++ +.....++++.++++| +++|++|+++
T Consensus 126 iein~~~P~---~-~-g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~--~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 126 LELNLSCPN---V-P-GKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYF--DIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp EEEECCCCC---S-T-TCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCC--CHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred EEEEcCCCC---C-C-CchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCC--CHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 999999995 3 2 25667778999999999999999999999999775 3456788899999999 9999999987
Q ss_pred cccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC----ccHHHHHHHHhhCCCCcEE
Q psy9514 478 REQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ----ADWDYIEKCAQLCSPAPLY 553 (611)
Q Consensus 478 r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~----a~~~~i~~~~k~~~~iPVI 553 (611)
..... .+ ... ....+......+.+++. ..|++++++.+...++|||
T Consensus 199 ~~~~~-----i~-------------~~~------------~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi 248 (314)
T 2e6f_A 199 GNGLV-----ID-------------AES------------ESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVF 248 (314)
T ss_dssp EEEEC-----EE-------------TTT------------TEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEE
T ss_pred Ccccc-----cc-------------CCC------------CCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEE
Confidence 31100 00 000 00000000111223332 3578888887764489999
Q ss_pred EecCCCCHHHHHHHHHcCCCccEEEEcHHhhh-CCchHHHHHccc
Q psy9514 554 GNGDILSYEDYTESLKKSPSISGVMIGRGALI-KPWIFQEIKEKK 597 (611)
Q Consensus 554 gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~-dP~lf~ei~~g~ 597 (611)
++|||.|++|+.+++..| ||+|||||+++. +||+|++|+++.
T Consensus 249 ~~GGI~~~~da~~~l~~G--Ad~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 249 GCGGVYSGEDAFLHILAG--ASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp EESSCCSHHHHHHHHHHT--CSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcC--CCEEEEchhhHhcCcHHHHHHHHHH
Confidence 999999999999999987 999999999997 999999998764
No 25
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.95 E-value=1.4e-26 Score=245.73 Aligned_cols=271 Identities=12% Similarity=0.076 Sum_probs=193.5
Q ss_pred cccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhH
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVL 328 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~ 328 (611)
..++.+|+|+|++++|.=+...+..+-+.....|++.+++..+...+. .|.+.. .++ +.+ .. .+.-.|-....+
T Consensus 38 ~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq-~GNp~P-R~~-~~~-~~--~iN~~G~~n~G~ 111 (354)
T 4ef8_A 38 QVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALR-EGNPTP-RYQ-ALP-LG--SINSMGLPNNGF 111 (354)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCB-CCSCSC-CEE-EET-TE--EEECCCCCBCCH
T ss_pred ceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCccc-CCCCCC-cEE-ecc-hh--hhccCCCCCcCH
Confidence 578899999999999976554566666666788999998887776542 122110 000 000 00 011111111111
Q ss_pred HHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHH--hcccceEEeccCCC
Q psy9514 329 TKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEE--QMVVDFVDVNLGCP 406 (611)
Q Consensus 329 ~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~--~~g~D~IELN~gCP 406 (611)
....+.+.+. ....+.++++||+|.+++++.++|+++.+ ..|+|+||||+|||
T Consensus 112 ~~~~~~l~~~-------------------------~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCP 166 (354)
T 4ef8_A 112 DFYLAYAAEQ-------------------------HDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCP 166 (354)
T ss_dssp HHHHHHHHHT-------------------------CCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSC
T ss_pred HHHHHHHHHH-------------------------hhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCC
Confidence 1111111110 00124689999999999999999999974 45899999999999
Q ss_pred ccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcC-CCEEEEEccccccccccC
Q psy9514 407 IEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWG-ASLITLHGRTREQRYTKQ 485 (611)
Q Consensus 407 ~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aG-vd~ItvhgR~r~qr~~~~ 485 (611)
... | |.+|+.+++.+.+|+++|++++++||+||+|.+++ .....++++.++++| +|+|++++++....
T Consensus 167 ---n~~-g-g~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d--~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~---- 235 (354)
T 4ef8_A 167 ---NVP-G-KPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFD--FAHFDAAAEILNEFPKVQFITCINSIGNGL---- 235 (354)
T ss_dssp ---CST-T-SCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCS--HHHHHHHHHHHHTCTTEEEEEECCCEEEEE----
T ss_pred ---CCC-C-chhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCC--HHHHHHHHHHHHhCCCccEEEEecccCcce----
Confidence 443 3 68898999999999999999999999999999863 455678888888998 99999988762100
Q ss_pred cChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc-------ccccccCC----ccHHHHHHHHhhCCCCcEEE
Q psy9514 486 ADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT-------REQRYTKQ----ADWDYIEKCAQLCSPAPLYG 554 (611)
Q Consensus 486 adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt-------r~g~~~~~----a~~~~i~~~~k~~~~iPVIg 554 (611)
.|.+|+|+ ..++|+++ .+|+.++++.+...++|||+
T Consensus 236 ---------------------------------~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~ 282 (354)
T 4ef8_A 236 ---------------------------------VIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFG 282 (354)
T ss_dssp ---------------------------------CEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ---------------------------------eeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEE
Confidence 01112221 22335553 57999999988755899999
Q ss_pred ecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC-CchHHHHHcc
Q psy9514 555 NGDILSYEDYTESLKKSPSISGVMIGRGALIK-PWIFQEIKEK 596 (611)
Q Consensus 555 nGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d-P~lf~ei~~g 596 (611)
+|||.|++|+.+++..| ||+|||||+++.+ ||+|.+|.++
T Consensus 283 ~GGI~s~~da~~~l~aG--Ad~V~vgra~l~~GP~~~~~i~~~ 323 (354)
T 4ef8_A 283 CGGVYTGEDAFLHVLAG--ASMVQVGTALQEEGPSIFERLTSE 323 (354)
T ss_dssp ESCCCSHHHHHHHHHHT--EEEEEECHHHHHHCTTHHHHHHHH
T ss_pred ECCcCCHHHHHHHHHcC--CCEEEEhHHHHHhCHHHHHHHHHH
Confidence 99999999999999987 9999999999999 9999999875
No 26
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.95 E-value=1.4e-26 Score=244.29 Aligned_cols=268 Identities=13% Similarity=0.116 Sum_probs=185.6
Q ss_pred CcccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChh-hhHhHhhccCCCeEEEEecCCChh
Q psy9514 248 KNSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQ-EWALIKRHESEDLFGVQLCGNNPY 326 (611)
Q Consensus 248 ~p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~-e~~l~~~h~~e~~~~vQi~g~~p~ 326 (611)
.|.++.+++|+||+++|++.+ .+..|++.+.++|+++++|+++.+.+.. +.+. .|.. ...+.- .+.-.|-...
T Consensus 45 l~~~i~g~~l~npi~~aag~~-~~~~~~~~~a~~G~g~i~~~~~~~~~~~-g~~~pr~~~---~~~d~~-~in~~g~~~~ 118 (336)
T 1f76_A 45 KPVNCMGLTFKNPLGLAAGLD-KDGECIDALGAMGFGSIEIGTVTPRPQP-GNDKPRLFR---LVDAEG-LINRMGFNNL 118 (336)
T ss_dssp CCEEETTEEESSSEEECTTSS-TTCCCHHHHHHTTCSEEEEEEECSSCBC-CSCSCCEEE---ETTTTE-EEECCCCCBC
T ss_pred CCeEECCEEcCCCcEeCcccC-CcHHHHHHHHHcCccEEEeCCCCCCCCC-CCCCcceee---ccccce-eeecCCCCCc
Confidence 368999999999999998643 3334888889999999999999887542 2110 1100 000000 0100111111
Q ss_pred hHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCc-------hHHHHHHHHHHHHhcccceE
Q psy9514 327 VLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNN-------PYVLTKCTQLLEEQMVVDFV 399 (611)
Q Consensus 327 ~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~-------p~~~~~aA~~l~~~~g~D~I 399 (611)
......+.++.. ..+.++++|++++. ++++.++++++.+ |+|+|
T Consensus 119 g~~~~~~~~~~~---------------------------~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~--g~d~i 169 (336)
T 1f76_A 119 GVDNLVENVKKA---------------------------HYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA--YAGYI 169 (336)
T ss_dssp CHHHHHHHHHHC---------------------------CCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG--GCSEE
T ss_pred CHHHHHHHHHhc---------------------------ccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc--cCCEE
Confidence 112222222220 01236889999887 8999999998863 89999
Q ss_pred EeccCCCccceeccccccccccChHHHHHHHHHHHhhc---------CCCEEEEEEccccCCchHHHHHHHHHHHcCCCE
Q psy9514 400 DVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS---------SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 400 ELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~---------~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
|||++||..+ |..++++++++.+++++|++.+ ++||+||++.+++ .+++.++++.++++|+|+
T Consensus 170 ein~~sP~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~--~~~~~~~a~~l~~~Gvd~ 241 (336)
T 1f76_A 170 AINISSPNTP------GLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLS--EEELIQVADSLVRHNIDG 241 (336)
T ss_dssp EEECCCSSST------TGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCC--HHHHHHHHHHHHHTTCSE
T ss_pred EEEccCCCCC------CcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCC--HHHHHHHHHHHHHcCCcE
Confidence 9999999532 3456778999999999999988 7999999886543 356789999999999999
Q ss_pred EEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC----ccHHHHHHHHhh
Q psy9514 471 ITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ----ADWDYIEKCAQL 546 (611)
Q Consensus 471 ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~----a~~~~i~~~~k~ 546 (611)
|+||+++..... .. .+.+ .+..+.+.++ ..+.+++++.+.
T Consensus 242 i~vsn~~~~~~~-----~~-------------------~~~~------------~~~~gg~~g~~~~~~~~~~i~~i~~~ 285 (336)
T 1f76_A 242 VIATNTTLDRSL-----VQ-------------------GMKN------------CDQTGGLSGRPLQLKSTEIIRRLSLE 285 (336)
T ss_dssp EEECCCBCCCTT-----ST-------------------TSTT------------TTCSSEEEEGGGHHHHHHHHHHHHHH
T ss_pred EEEeCCcccccc-----cc-------------------cccc------------cccCCCcCCchhHHHHHHHHHHHHHH
Confidence 999998632110 00 0000 0011113332 235677777665
Q ss_pred CC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh-CCchHHHHHcc
Q psy9514 547 CS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI-KPWIFQEIKEK 596 (611)
Q Consensus 547 ~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~-dP~lf~ei~~g 596 (611)
.. ++|||++|||.|++|+.++++.| ||+|||||++|. +||||.+|+++
T Consensus 286 ~~~~ipVi~~GGI~~~~da~~~l~~G--Ad~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 286 LNGRLPIIGVGGIDSVIAAREKIAAG--ASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp HTTSSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHHHCHHHHHHHHHH
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHCC--CCEEEeeHHHHhcCcHHHHHHHhh
Confidence 43 79999999999999999999987 999999999998 99999999875
No 27
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.94 E-value=9.5e-26 Score=238.57 Aligned_cols=268 Identities=13% Similarity=0.088 Sum_probs=189.7
Q ss_pred cccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhH
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVL 328 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~ 328 (611)
+.++.+|+|+|++++|.=+...+..+.+.+...|++.+++.++...+.. |.+.. +++. -+ . -.+.-.|-....+
T Consensus 39 ~~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~-gnp~P-R~~~-~~--~-~~iN~~G~~n~G~ 112 (345)
T 3oix_A 39 HTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERA-GNPQP-RYAD-TK--L-GSINSMGLPNLGI 112 (345)
T ss_dssp CEEETTEEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBC-CSCSC-CEEE-CS--S-EEEECCCCCBSCH
T ss_pred CeEECCEECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCC-CCCCC-cEEe-cc--c-chhccCCCCChhH
Confidence 5789999999999999665556778888888999999999998876532 22110 0000 00 0 0111112111111
Q ss_pred HHHHHHHhhhccceeeeccCCCCcchhhccCCCccc-cccccceeeecccCchHHHHHHHHHHHHhcccc-eEEeccCCC
Q psy9514 329 TKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGL-LQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVD-FVDVNLGCP 406 (611)
Q Consensus 329 ~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l-~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D-~IELN~gCP 406 (611)
....+.+.+. + ...+.++++||+|.+++++.++|+++++ .+++ +||||+|||
T Consensus 113 ~~~~~~l~~~-------------------------~~~~~~~pvivsI~g~~~~d~~~~a~~l~~-~g~~d~ielNisCP 166 (345)
T 3oix_A 113 NYYLDYVTEL-------------------------QKQPDSKNHFLSLVGMSPEETHTILXMVEA-SKYQGLVELNLSCP 166 (345)
T ss_dssp HHHHHHHHHH-------------------------HHSTTCCCCEEEECCSSHHHHHHHHHHHHH-SSCCSEEEEECSCC
T ss_pred HHHHHHHHHH-------------------------hhccCCCCEEEEecCCCHHHHHHHHHHHhc-cCCCcEEEEecCCC
Confidence 1111111110 0 0124689999999999999999999964 4676 999999999
Q ss_pred ccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCc
Q psy9514 407 IEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA 486 (611)
Q Consensus 407 ~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~a 486 (611)
... | |.+|+.+++.+.+|+++|++.+++||+||+|.+. +..++++.++.+|++.|++++++....
T Consensus 167 ---n~~-G-~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~-----~~~~~a~~~~~aga~~i~~int~nt~g----- 231 (345)
T 3oix_A 167 ---NVP-G-XPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYF-----DIVHFDQAAAIFNXYPLTFVNCINSIG----- 231 (345)
T ss_dssp ---CST-T-CCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC-----CHHHHHHHHHHHTTSCCSEEEECCCEE-----
T ss_pred ---CcC-C-chhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCC-----CHHHHHHHHHHhCCCceEEEEeecccc-----
Confidence 444 3 5788899999999999999999999999999763 346778888888887777666552100
Q ss_pred ChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc-------cccccccCCcc----HHHHHHHHhhCC-CCcEEE
Q psy9514 487 DWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR-------TREQRYTKQAD----WDYIEKCAQLCS-PAPLYG 554 (611)
Q Consensus 487 dw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr-------tr~g~~~~~a~----~~~i~~~~k~~~-~iPVIg 554 (611)
..+++|.+ +..++|++++. |++++++.+... ++|||+
T Consensus 232 -------------------------------~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg 280 (345)
T 3oix_A 232 -------------------------------NGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIG 280 (345)
T ss_dssp -------------------------------EEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEE
T ss_pred -------------------------------cceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEE
Confidence 01122222 22344666664 788888877653 799999
Q ss_pred ecCCCCHHHHHHHHHcCCCccEEEEcHH-hhhCCchHHHHHcc
Q psy9514 555 NGDILSYEDYTESLKKSPSISGVMIGRG-ALIKPWIFQEIKEK 596 (611)
Q Consensus 555 nGgI~s~eda~~~l~~G~~aD~VmIGRg-aL~dP~lf~ei~~g 596 (611)
+|||.|++|+.+++..| ||+|||||+ ++.+||+|.+|.++
T Consensus 281 ~GGI~s~~da~~~l~aG--Ad~V~igra~~~~gP~~~~~i~~~ 321 (345)
T 3oix_A 281 TGGVXTGRDAFEHILCG--ASMVQIGTALHQEGPQIFKRITKE 321 (345)
T ss_dssp ESSCCSHHHHHHHHHHT--CSEEEESHHHHHHCTHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHhC--CCEEEEChHHHhcChHHHHHHHHH
Confidence 99999999999999987 999999999 89999999999875
No 28
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.94 E-value=2.9e-26 Score=238.37 Aligned_cols=264 Identities=16% Similarity=0.191 Sum_probs=186.7
Q ss_pred cccccCeeecCcEEecc-CCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEec---CCC
Q psy9514 249 NSEKKKIDWQGKLYLSP-LTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLC---GNN 324 (611)
Q Consensus 249 p~ei~~l~l~nrivlAP-Mt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~---g~~ 324 (611)
|.++.+++|+||+++|| |++.+. +|++.+...|+++++|+.+...|...... ..+. ....+ .++-. ..+
T Consensus 8 ~~~~~g~~l~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~--p~l~-~~~~g---~~~~~g~~~~~ 80 (311)
T 1ep3_A 8 SVKLPGLDLKNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPT--PRVA-ETASG---MLNAIGLQNPG 80 (311)
T ss_dssp CEEETTEEESSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCS--CCEE-EETTE---EEECCCCCBCC
T ss_pred ceEECCEECCCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCC--CeEE-ECCcc---cccccCCCCcC
Confidence 67899999999999999 877654 67777767789999998877665432111 0111 00000 11111 111
Q ss_pred hhhHHH-HHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEecc
Q psy9514 325 PYVLTK-CTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNL 403 (611)
Q Consensus 325 p~~~~~-~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~ 403 (611)
++.+.+ ..+.+.+. ..+.++++|+++++++.+.++++.+.+..|+|+||||+
T Consensus 81 ~~~~~~~~~~~~~~~---------------------------~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~ 133 (311)
T 1ep3_A 81 LEVIMTEKLPWLNEN---------------------------FPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNI 133 (311)
T ss_dssp HHHHHHTHHHHHHHH---------------------------CTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHhc---------------------------CCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeC
Confidence 221111 00000000 01457899999999999999999986437999999999
Q ss_pred CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccc
Q psy9514 404 GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 483 (611)
Q Consensus 404 gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~ 483 (611)
+||. .+.| |..+..+++++.++++++++.+++||.||++.++. ...++++.++++|+|+|++.++.....
T Consensus 134 ~~p~---~~~g-~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~----~~~~~a~~l~~~G~d~i~v~~~~~g~~-- 203 (311)
T 1ep3_A 134 SCPN---VKHG-GQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVT----DIVPIAKAVEAAGADGLTMINTLMGVR-- 203 (311)
T ss_dssp CSEE---GGGT-TEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSS----CSHHHHHHHHHTTCSEEEECCCEEECC--
T ss_pred CCCC---CCCc-hhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChH----HHHHHHHHHHHcCCCEEEEeCCCcccc--
Confidence 9995 3333 56677899999999999999999999999996653 345789999999999999976542110
Q ss_pred cCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc-------cccccCCcc----HHHHHHHHhhCCCCcE
Q psy9514 484 KQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR-------EQRYTKQAD----WDYIEKCAQLCSPAPL 552 (611)
Q Consensus 484 ~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr-------~g~~~~~a~----~~~i~~~~k~~~~iPV 552 (611)
+|.+++ .+.+++++. +++++++.+. .++||
T Consensus 204 --------------------------------------i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~-~~ipv 244 (311)
T 1ep3_A 204 --------------------------------------FDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD-VDIPI 244 (311)
T ss_dssp --------------------------------------BCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT-CSSCE
T ss_pred --------------------------------------cCcccCCccccCCCCcccCccchHHHHHHHHHHHHh-cCCCE
Confidence 111111 122444444 4677777654 48999
Q ss_pred EEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHccc
Q psy9514 553 YGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKK 597 (611)
Q Consensus 553 IgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~ 597 (611)
|++|||.|++|+.++++.| ||+|||||+++.+|+++++++++.
T Consensus 245 ia~GGI~~~~d~~~~l~~G--Ad~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 245 IGMGGVANAQDVLEMYMAG--ASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp EECSSCCSHHHHHHHHHHT--CSEEEECTHHHHCTTHHHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHcC--CCEEEECHHHHcCcHHHHHHHHHH
Confidence 9999999999999999987 999999999999999999998763
No 29
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.93 E-value=7.1e-25 Score=238.57 Aligned_cols=279 Identities=15% Similarity=0.142 Sum_probs=193.2
Q ss_pred CCCcccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCCh
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNP 325 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p 325 (611)
+..|.++.+++|+|+++||++..-....++.+ .++|+++++++++...+.. |++. ..+++..+ . .-.+.-.|-+-
T Consensus 80 ~~l~~~i~Gl~~~NPvglAAG~dk~~~~~~~l-~~~GfG~v~~gtvT~~pq~-GNp~-PR~~rl~e-~-~~iiN~~GfnN 154 (443)
T 1tv5_A 80 IYACTNIKHLDFINPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQT-GNAK-PRIFRDVE-S-RSIINSCGFNN 154 (443)
T ss_dssp GGGCEEETTEEESSSEEECTTTTTTCSSHHHH-HTTTCSEEEEEEECSSCBC-CSCS-CCEEEETT-T-TEEEECCCSCB
T ss_pred ccCCeEECCEEeCCCcEECCcccCccHHHHHH-HhcCCCEEEEeeeecCCCC-CCCC-ccEEeccc-c-ceeeeccccCC
Confidence 34578999999999999999886544567775 6789999999999876532 2111 01111001 1 11122223221
Q ss_pred hhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCc-----hHHHHHHHHHHHHhcccceEE
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNN-----PYVLTKCTQLLEEQMVVDFVD 400 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~-----p~~~~~aA~~l~~~~g~D~IE 400 (611)
..+...++.+.....- . . .+. .....++++|++++. ++++.++++.+.+ ++|+||
T Consensus 155 ~G~~~~~~~l~~~~~~-~-~------~~~----------~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~--~aD~ie 214 (443)
T 1tv5_A 155 MGCDKVTENLILFRKR-Q-E------EDK----------LLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGR--YADYIA 214 (443)
T ss_dssp SCHHHHHHHHHHHHHH-H-H------HCS----------TTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGG--GCSEEE
T ss_pred hhHHHHHHHHHHHhhh-c-c------ccc----------ccCCceEEEEecCcccchHHHHHHHHHHHHHhc--CCCEEE
Confidence 2222223333221000 0 0 000 001246899999998 8999999999864 799999
Q ss_pred eccCCCccceeccccccccccChHHHHHHHHHHHhh--------------------------------------------
Q psy9514 401 VNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEV-------------------------------------------- 436 (611)
Q Consensus 401 LN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~-------------------------------------------- 436 (611)
||+||| ... |..++++++++.+|+++|++.
T Consensus 215 iNiscP---nt~---Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~ 288 (443)
T 1tv5_A 215 INVSSP---NTP---GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNF 288 (443)
T ss_dssp EECCCT---TST---TGGGGGSHHHHHHHHHHHHHHHHHHC--------------------------------------C
T ss_pred EeccCC---CCc---ccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcc
Confidence 999999 443 678899999999999999864
Q ss_pred ------cCCC-EEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcc
Q psy9514 437 ------SSLP-ITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFM 509 (611)
Q Consensus 437 ------~~~P-vtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~ 509 (611)
.++| |+||++.++++ ++..++++.++++|+|+|++|+|+..+- +..
T Consensus 289 ~~~~~~~~~P~V~vKispd~~~--ed~~~iA~~~~~aGaDgI~v~ntt~~~~-----d~~-------------------- 341 (443)
T 1tv5_A 289 LWFNTTKKKPLVFVKLAPDLNQ--EQKKEIADVLLETNIDGMIISNTTTQIN-----DIK-------------------- 341 (443)
T ss_dssp CCCSSSSSCCEEEEEECSCCCH--HHHHHHHHHHHHTTCSEEEECCCBSCCC-----CCG--------------------
T ss_pred hhcccCCCCCeEEEEeCCCCCH--HHHHHHHHHHHHcCCCEEEEECCCcccc-----ccc--------------------
Confidence 2578 99999976542 4678999999999999999999986321 000
Q ss_pred hhhHhcCCceEEeccccccccccCCc----cHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 510 PKFRDWGASLITLHGRTREQRYTKQA----DWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 510 ~~l~~~G~~~itihgrtr~g~~~~~a----~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.+ ....+++++++ .++.++++.+... ++|||++|||.|++|+.+++..| ||+|||||+++
T Consensus 342 -~~------------~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG--Ad~Vqigrall 406 (443)
T 1tv5_A 342 -SF------------ENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG--ASVCQLYSCLV 406 (443)
T ss_dssp -GG------------TTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT--EEEEEESHHHH
T ss_pred -cc------------ccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHH
Confidence 00 00112244443 3577888776643 89999999999999999999987 99999999988
Q ss_pred h-CCchHHHHHccc
Q psy9514 585 I-KPWIFQEIKEKK 597 (611)
Q Consensus 585 ~-dP~lf~ei~~g~ 597 (611)
. +||++.+|+++.
T Consensus 407 ~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 407 FNGMKSAVQIKREL 420 (443)
T ss_dssp HHGGGHHHHHHHHH
T ss_pred hcChHHHHHHHHHH
Confidence 7 999999998764
No 30
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.92 E-value=5.6e-24 Score=227.00 Aligned_cols=276 Identities=15% Similarity=0.149 Sum_probs=183.5
Q ss_pred cccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhH
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVL 328 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~ 328 (611)
+.++.+++|+|++++|.=+.-....++.+. .+|+|.+.+..+...+. .|++.. ++++ .+.+. -.+.-.|-.-..+
T Consensus 51 ~~~~~Gl~~~NPvglAaG~~~~~~~~~~~~-~~g~G~v~~ktvt~~pq-~GNp~P-R~~~-~~~~~-~~iN~~G~~N~G~ 125 (367)
T 3zwt_A 51 EVRVLGHKFRNPVGIAAGFDKHGEAVDGLY-KMGFGFVEIGSVTPKPQ-EGNPRP-RVFR-LPEDQ-AVINRYGFNSHGL 125 (367)
T ss_dssp CEEETTEEESSSEEECTTSSTTSSSHHHHH-HTTCSEEEEEEECSSCB-CCSCSC-CEEE-EGGGT-EEEECCCCCBCCH
T ss_pred cEEECCEEcCCCCEeCCCcCCCHHHHHHHH-hcCcCeEEeCCccCCCC-CCCCCC-eEEE-ecCcc-ceeeccCCCCccH
Confidence 478899999999999964432223455555 46999999998876552 122210 0110 01000 0111112111111
Q ss_pred HHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccC-----chHHHHHHHHHHHHhcccceEEecc
Q psy9514 329 TKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGN-----NPYVLTKCTQLLEEQMVVDFVDVNL 403 (611)
Q Consensus 329 ~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~-----~p~~~~~aA~~l~~~~g~D~IELN~ 403 (611)
....+.+.+.. .. .........++++||+++ ++++++++++.+.+ ++|+||||+
T Consensus 126 ~~~~~~l~~~~-------------~~------~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~--~ad~ielNi 184 (367)
T 3zwt_A 126 SVVEHRLRARQ-------------QK------QAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP--LADYLVVNV 184 (367)
T ss_dssp HHHHHHHHTTH-------------HH------HHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG--GCSEEEEEC
T ss_pred HHHHHHHHHHh-------------hh------ccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh--hCCEEEEEC
Confidence 11111111100 00 000001245899999997 78999999999864 689999999
Q ss_pred CCCccceeccccccccccChHHHHHHHHHHHhh-------cCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 404 GCPIEFIYKQGSGSGLLQRANILQSVITCMNEV-------SSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 404 gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~-------~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
||| ... |..++++++.+.+++++|+++ .++||+||+|.++++ ++..++++.++++|+|+|++|+|
T Consensus 185 sCP---n~~---G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~--~~~~~ia~~~~~aGadgi~v~nt 256 (367)
T 3zwt_A 185 SSP---NTA---GLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS--QDKEDIASVVKELGIDGLIVTNT 256 (367)
T ss_dssp CCT---TST---TGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH--HHHHHHHHHHHHHTCCEEEECCC
T ss_pred CCC---CCC---CccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCH--HHHHHHHHHHHHcCCCEEEEeCC
Confidence 999 443 345789999999999999865 679999999987543 56789999999999999999999
Q ss_pred ccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc----cHHHHHHHHhhCC-CCc
Q psy9514 477 TREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA----DWDYIEKCAQLCS-PAP 551 (611)
Q Consensus 477 ~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a----~~~~i~~~~k~~~-~iP 551 (611)
+..+..... +.+ ....+++++++ .++.++++.+... ++|
T Consensus 257 t~~r~~~~~------------------------~~~------------~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ip 300 (367)
T 3zwt_A 257 TVSRPAGLQ------------------------GAL------------RSETGGLSGKPLRDLSTQTIREMYALTQGRVP 300 (367)
T ss_dssp BSCCCTTCC------------------------CTT------------TTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred Ccccccccc------------------------ccc------------ccccCCcCCcccchhHHHHHHHHHHHcCCCce
Confidence 843210000 000 00112245544 4578888877653 799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh-hCCchHHHHHcc
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSISGVMIGRGAL-IKPWIFQEIKEK 596 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL-~dP~lf~ei~~g 596 (611)
||++|||.|++|+.+++..| ||+|||||+++ .+||+|.+|.++
T Consensus 301 vI~~GGI~s~~da~~~l~~G--Ad~V~vgra~l~~gP~~~~~i~~~ 344 (367)
T 3zwt_A 301 IIGVGGVSSGQDALEKIRAG--ASLVQLYTALTFWGPPVVGKVKRE 344 (367)
T ss_dssp EEEESSCCSHHHHHHHHHHT--CSEEEESHHHHHHCTHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHcC--CCEEEECHHHHhcCcHHHHHHHHH
Confidence 99999999999999999987 99999999996 579999999876
No 31
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.91 E-value=1.5e-23 Score=225.61 Aligned_cols=277 Identities=16% Similarity=0.141 Sum_probs=182.5
Q ss_pred CCCcccccCeeecCcEEeccCCC-CCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCC
Q psy9514 246 KIKNSEKKKIDWQGKLYLSPLTT-VGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNN 324 (611)
Q Consensus 246 ~f~p~ei~~l~l~nrivlAPMt~-~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~ 324 (611)
++.+.++.+++|+|++.+|.=+. .+. .++.+. ++|++++.+..+...|- .|++. -++++..+.+ -.+.-.|-+
T Consensus 82 ~~l~v~~~Gl~f~NPvglAAG~dk~~~-~~~~l~-~lGfG~vevgtvT~~pq-~GNp~-PRlfrl~e~~--aiiN~~Gfn 155 (415)
T 3i65_A 82 IYACTNIKHLDFINPFGVAAGFDKNGV-CIDSIL-KLGFSFIEIGTITPRGQ-TGNAK-PRIFRDVESR--SIINSCGFN 155 (415)
T ss_dssp GGGCEEETTEEESSSEEECTTSSTTCS-SHHHHH-TTTCSEEEEEEECSSCB-CCSCS-CCEEEEGGGT--EEEECCCSC
T ss_pred ccccEEECCEECCCCCEECCCCCCCHH-HHHHHH-HcCCCeEEeCcccCCcC-CCCCC-CeEEeccCCC--ceeecCCCC
Confidence 44578899999999999996443 332 344444 78999998887765542 22221 1111100111 122222322
Q ss_pred hhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCc-----hHHHHHHHHHHHHhcccceE
Q psy9514 325 PYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNN-----PYVLTKCTQLLEEQMVVDFV 399 (611)
Q Consensus 325 p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~-----p~~~~~aA~~l~~~~g~D~I 399 (611)
-..+....+.+.+... . .....+ ....++++||+++. +++|.++++.+.+ .+|.|
T Consensus 156 N~G~d~~~~~l~~~~~-~---~~~~~~--------------~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~--~ad~i 215 (415)
T 3i65_A 156 NMGCDKVTENLILFRK-R---QEEDKL--------------LSKHIVGVSIGKNKDTVNIVDDLKYCINKIGR--YADYI 215 (415)
T ss_dssp BCCHHHHHHHHHHHHH-H---HTTCGG--------------GTTCEEEEEECCCTTCSCHHHHHHHHHHHHGG--GCSEE
T ss_pred chhHHHHHHHHHHHHh-h---cccccc--------------ccCceEEEEeccccCccccHHHHHHHHHHHHh--hCCEE
Confidence 1122222222211000 0 000000 01246889999997 8999999999975 39999
Q ss_pred EeccCCCccceeccccccccccChHHHHHHHHHHHhhc--------------------CCC-EEEEEEccccCCchHHHH
Q psy9514 400 DVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--------------------SLP-ITVKTRTGIHKDNNIIHN 458 (611)
Q Consensus 400 ELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--------------------~~P-vtVKiR~g~~~~~~~a~~ 458 (611)
|||+||| +.. |..++++++.+.+|+++|++.. .+| |+|||+.++++ +...+
T Consensus 216 eiNiScP---Nt~---Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~--~~i~~ 287 (415)
T 3i65_A 216 AINVSSP---NTP---GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQ--EQKKE 287 (415)
T ss_dssp EEECCCC---C-----------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCH--HHHHH
T ss_pred EEECCCC---CCC---CcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCH--HHHHH
Confidence 9999999 543 6789999999999999998862 589 99999987643 46789
Q ss_pred HHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH-
Q psy9514 459 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW- 537 (611)
Q Consensus 459 la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~- 537 (611)
++++++++|+|+|++|+|+..+- +.. .+ ....|.+++++.|
T Consensus 288 iA~~a~~aGaDgIiv~Ntt~~r~-----dl~---------------------~~------------~~~~GGlSG~a~~p 329 (415)
T 3i65_A 288 IADVLLETNIDGMIISNTTTQIN-----DIK---------------------SF------------ENKKGGVSGAKLKD 329 (415)
T ss_dssp HHHHHHHHTCSEEEECCCBSCCC-----CCG---------------------GG------------TTCCSEEEEGGGHH
T ss_pred HHHHHHHcCCcEEEEeCCCcccc-----ccc---------------------cc------------ccccCCcCCccchH
Confidence 99999999999999999986421 100 00 0112336666655
Q ss_pred ---HHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC-CchHHHHHcc
Q psy9514 538 ---DYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK-PWIFQEIKEK 596 (611)
Q Consensus 538 ---~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d-P~lf~ei~~g 596 (611)
+.++++.+... ++|||++|||.|++|+.+++..| ||+|||||+++.+ ||+|.+|.++
T Consensus 330 ~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aG--Ad~VqIgra~l~~GP~~~~~i~~~ 391 (415)
T 3i65_A 330 ISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG--ASVCQLYSCLVFNGMKSAVQIKRE 391 (415)
T ss_dssp HHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHT--EEEEEESHHHHHHGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHhcCHHHHHHHHHH
Confidence 78888877643 79999999999999999999987 9999999999988 9999999875
No 32
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.90 E-value=1.5e-22 Score=241.85 Aligned_cols=283 Identities=13% Similarity=0.115 Sum_probs=196.7
Q ss_pred ccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChh--hhHhH----hhccC-CCeEEEEecC
Q psy9514 250 SEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQ--EWALI----KRHES-EDLFGVQLCG 322 (611)
Q Consensus 250 ~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~--e~~l~----~~h~~-e~~~~vQi~g 322 (611)
.++-++.|+|++++|||+..++.++.+.+...|+++++++++...+-.-+... -+.+. ...+. +..+-..+..
T Consensus 535 ~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~ 614 (1025)
T 1gte_A 535 VEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELIS 614 (1025)
T ss_dssp EEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSC
T ss_pred eeeccccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeecccc
Confidence 46678999999999999998999999999999999999998876532212211 11100 00000 0011101111
Q ss_pred -CChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeec-ccCchHHHHHHHHHHHHhcccceEE
Q psy9514 323 -NNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQL-CGNNPYVLTKCTQLLEEQMVVDFVD 400 (611)
Q Consensus 323 -~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi-~g~~p~~~~~aA~~l~~~~g~D~IE 400 (611)
...+.+.+....+.+. ..+.++++++ +|.+++.+.++++++. ..|+|+||
T Consensus 615 ~~~~~~~~~~i~~~~~~---------------------------~~~~~~i~~i~~g~~~~~~~~~a~~~~-~~g~d~ie 666 (1025)
T 1gte_A 615 EKTAAYWCQSVTELKAD---------------------------FPDNIVIASIMCSYNKNDWMELSRKAE-ASGADALE 666 (1025)
T ss_dssp SSCHHHHHHHHHHHHHH---------------------------CTTSEEEEEECCCSCHHHHHHHHHHHH-HTTCSEEE
T ss_pred chhHHHHHHHHHHHHhc---------------------------CCCCCeEEEecCCCCHHHHHHHHHHHH-hcCCCEEE
Confidence 1122221111111110 0123567766 6789999999999986 36999999
Q ss_pred eccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccccc
Q psy9514 401 VNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQ 480 (611)
Q Consensus 401 LN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~q 480 (611)
||++||.. ...+++|++|+++++++.++++++++.+++||+||++.+. .+..++++.++++|+|+|++++++...
T Consensus 667 in~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~----~~~~~~a~~~~~~G~d~i~v~Nt~~~~ 741 (1025)
T 1gte_A 667 LNLSCPHG-MGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNV----TDIVSIARAAKEGGADGVTATNTVSGL 741 (1025)
T ss_dssp EECCCBCC-CC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCS----SCHHHHHHHHHHHTCSEEEECCCEEEC
T ss_pred EECCCCCC-CCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCCh----HHHHHHHHHHHHcCCCEEEEecccccc
Confidence 99999977 5677899999999999999999999999999999998644 347789999999999999998875331
Q ss_pred ccc--cCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH----HHHHHHHhhCCCCcEEE
Q psy9514 481 RYT--KQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW----DYIEKCAQLCSPAPLYG 554 (611)
Q Consensus 481 r~~--~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~----~~i~~~~k~~~~iPVIg 554 (611)
..- ....| ..+..|+|+..+.+.+++.| ++++++.+...++|||+
T Consensus 742 ~~~~~~~~~~-----------------------------~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~ 792 (1025)
T 1gte_A 742 MGLKADGTPW-----------------------------PAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILA 792 (1025)
T ss_dssp CCBCTTSCBS-----------------------------SCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEE
T ss_pred cccccccccc-----------------------------ccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEE
Confidence 100 00000 01112677777778887775 67888877765899999
Q ss_pred ecCCCCHHHHHHHHHcCCCccEEEEcHHhhh-CCchHHHHHcc
Q psy9514 555 NGDILSYEDYTESLKKSPSISGVMIGRGALI-KPWIFQEIKEK 596 (611)
Q Consensus 555 nGgI~s~eda~~~l~~G~~aD~VmIGRgaL~-dP~lf~ei~~g 596 (611)
+|||.|++|+.+++..| +|+|||||++|. .|.+++++.++
T Consensus 793 ~GGI~s~~da~~~l~~G--a~~v~vg~~~l~~~~~~~~~~~~~ 833 (1025)
T 1gte_A 793 TGGIDSAESGLQFLHSG--ASVLQVCSAVQNQDFTVIQDYCTG 833 (1025)
T ss_dssp ESSCCSHHHHHHHHHTT--CSEEEESHHHHTSCTTHHHHHHHH
T ss_pred ecCcCCHHHHHHHHHcC--CCEEEEeeccccCCccHHHHHHHH
Confidence 99999999999999987 999999999998 66688877654
No 33
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.83 E-value=3.3e-19 Score=189.50 Aligned_cols=273 Identities=11% Similarity=0.060 Sum_probs=173.2
Q ss_pred cccccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEE-----EEecCC
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFG-----VQLCGN 323 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~-----vQi~g~ 323 (611)
..++-+++|+|++++|.-+-..+..+-......|++.+.+..+.-.+. .|++ ..+.|- +.-.|-
T Consensus 38 ~v~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq-~GNp----------~PR~~~l~~~~iN~~G~ 106 (354)
T 3tjx_A 38 QVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALR-EGNP----------TPRYQALPLGSINSMGL 106 (354)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCB-CCSC----------SCCEEEETTEEEECCCC
T ss_pred eEEECCEEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCcccc-cCCC----------CCeEEEccccccccccc
Confidence 477889999999999964333466665566678999888876654432 1222 111111 111111
Q ss_pred ChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHh--cccceEEe
Q psy9514 324 NPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQ--MVVDFVDV 401 (611)
Q Consensus 324 ~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~--~g~D~IEL 401 (611)
+-..+....+.+.. .......++++++.|.+++.+.+.++.+.+. .++|.|||
T Consensus 107 ~n~G~~~~~~~~~~-------------------------~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~iel 161 (354)
T 3tjx_A 107 PNNGFDFYLAYAAE-------------------------QHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILEL 161 (354)
T ss_dssp CBCCHHHHHHHHHH-------------------------TCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCHHHHHHHHHHHH-------------------------hhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEe
Confidence 11111111111110 0011246889999999999998888877653 37999999
Q ss_pred ccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHc-CCCEEEEEcccccc
Q psy9514 402 NLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDW-GASLITLHGRTREQ 480 (611)
Q Consensus 402 N~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~a-Gvd~ItvhgR~r~q 480 (611)
|++|| ... .|..|..++..+.++++++++.+..|+.+|++..+.. ......+..+.+. +++.++...+....
T Consensus 162 NiScP---n~~--g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~--~~~~~~~~~~~~~~~~~~i~~i~t~~~~ 234 (354)
T 3tjx_A 162 NLSCP---NVP--GKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDF--AAFDAAAEILNEFPKVQFITCINSIGNG 234 (354)
T ss_dssp ECC--------------CTTSHHHHHHHHHHHHHHCCSCEEEEECCCCSH--HHHHHHHHHHHTCTTEEEEEECCCEEEE
T ss_pred eeCCC---CCc--chhhhccCHHHHHHHHHHHHHHhhcccccccCCCCCc--hhHHHHHHHHHhhcccchhheecccccc
Confidence 99999 443 3678888999999999999999999999999987643 2223344455444 44544443322110
Q ss_pred ccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH----HHHHHHhhCCCCcEEEec
Q psy9514 481 RYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD----YIEKCAQLCSPAPLYGNG 556 (611)
Q Consensus 481 r~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~----~i~~~~k~~~~iPVIgnG 556 (611)
. ..+.....+.++.++..|.+++++.|. .++++.+....+||||+|
T Consensus 235 ~------------------------------~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~G 284 (354)
T 3tjx_A 235 L------------------------------VIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCG 284 (354)
T ss_dssp E------------------------------CEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEES
T ss_pred c------------------------------ccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEEeC
Confidence 0 000111222334455556688888764 455555666789999999
Q ss_pred CCCCHHHHHHHHHcCCCccEEEEcHHhh-hCCchHHHHHcc
Q psy9514 557 DILSYEDYTESLKKSPSISGVMIGRGAL-IKPWIFQEIKEK 596 (611)
Q Consensus 557 gI~s~eda~~~l~~G~~aD~VmIGRgaL-~dP~lf~ei~~g 596 (611)
||.|++|+.+++..| ||+||||+|++ .+||+|.+|.++
T Consensus 285 GI~s~~Da~e~i~aG--As~Vqv~Ta~~y~GP~~~~~I~~~ 323 (354)
T 3tjx_A 285 GVYTGEDAFLHVLAG--ASMVQVGTALQEEGPSIFERLTSE 323 (354)
T ss_dssp SCCSHHHHHHHHHHT--EEEEEECHHHHHHCTTHHHHHHHH
T ss_pred CcCCHHHHHHHHHcC--CCEEEEChhhhhcCchHHHHHHHH
Confidence 999999999999998 99999999975 789999999875
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.82 E-value=2.8e-19 Score=189.57 Aligned_cols=228 Identities=13% Similarity=0.153 Sum_probs=148.3
Q ss_pred cccccCeeecCcEEeccCCCCC-------CHHHHHHHHHcCCCEEEecCcccchhhcCChhhh-HhHhhccCCCeEEEEe
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVG-------NLPFRRLCKKWGADITCSEMAVATELLKSSPQEW-ALIKRHESEDLFGVQL 320 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~g-------nlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~-~l~~~h~~e~~~~vQi 320 (611)
..++.+++|++++++|||++.+ ++++++.|.++|+.+++++|+.. +-+-....| .+++....+
T Consensus 46 ~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~------- 116 (349)
T 1p0k_A 46 STKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA--LKDPSERLSYEIVRKENPN------- 116 (349)
T ss_dssp CEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT--TTCHHHHHHHHHHHHHCSS-------
T ss_pred eeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc--ccCcccccceehhhhhCCC-------
Confidence 4677899999999999999888 78999999999999999998764 111000111 111111112
Q ss_pred cCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecc-cCchHHHHHHHHHHHHhcccceE
Q psy9514 321 CGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLC-GNNPYVLTKCTQLLEEQMVVDFV 399 (611)
Q Consensus 321 ~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~-g~~p~~~~~aA~~l~~~~g~D~I 399 (611)
.++++|+. +.+++.+.++++. .|+|+|
T Consensus 117 ------------------------------------------------~pv~~~i~~~~~~~~~~~~~~~----~gad~i 144 (349)
T 1p0k_A 117 ------------------------------------------------GLIFANLGSEATAAQAKEAVEM----IGANAL 144 (349)
T ss_dssp ------------------------------------------------SCEEEEEETTCCHHHHHHHHHH----TTCSEE
T ss_pred ------------------------------------------------ceeEEeecCCCCHHHHHHHHHh----cCCCeE
Confidence 23455555 4455555444332 489999
Q ss_pred EeccCCCccceeccccccccccChHH--HHHHHHHHHhhcCCCEEEEEE-ccccCCchHHHHHHHHHHHcCCCEEEE--E
Q psy9514 400 DVNLGCPIEFIYKQGSGSGLLQRANI--LQSVITCMNEVSSLPITVKTR-TGIHKDNNIIHNFMPKFRDWGASLITL--H 474 (611)
Q Consensus 400 ELN~gCP~~~v~~~g~GsaLl~r~~~--l~eIv~av~~~~~~PvtVKiR-~g~~~~~~~a~~la~~l~~aGvd~Itv--h 474 (611)
|||++||...... .| ++.+ +.++++.+++.+++||.+|+. .+.+ .+.++.+.++|+|+|+| |
T Consensus 145 ~i~~~~~~~~~~~--~~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~------~~~a~~a~~~Gad~I~v~~~ 211 (349)
T 1p0k_A 145 QIHLNVIQEIVMP--EG-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS------KASAGKLYEAGAAAVDIGGY 211 (349)
T ss_dssp EEEECTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC------HHHHHHHHHHTCSEEEEEC-
T ss_pred EecccchhhhcCC--CC-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC------HHHHHHHHHcCCCEEEEcCC
Confidence 9999999543221 11 3333 778999999989999999984 3221 35688899999999999 5
Q ss_pred ccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEE
Q psy9514 475 GRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYG 554 (611)
Q Consensus 475 gR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIg 554 (611)
|++.... +..... . + + .....+.+.+.+..+.++.+...++|||+
T Consensus 212 ggt~~~~---------~e~~r~---------------~---~-------~-~~~~~~~g~~~~~~l~~v~~~~~~ipvia 256 (349)
T 1p0k_A 212 GGTNFSK---------IENLRR---------------Q---R-------Q-ISFFNSWGISTAASLAEIRSEFPASTMIA 256 (349)
T ss_dssp -----------------------------------------C-------C-GGGGTTCSCCHHHHHHHHHHHCTTSEEEE
T ss_pred CCcchhh---------HHHhhc---------------c---c-------c-hhhhhccCccHHHHHHHHHHhcCCCeEEE
Confidence 5441110 000000 0 0 0 00001345567788888877655899999
Q ss_pred ecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 555 NGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 555 nGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
+|||.|++|+.+++..| ||+|||||+++..+
T Consensus 257 ~GGI~~~~d~~k~l~~G--Ad~V~iG~~~l~~~ 287 (349)
T 1p0k_A 257 SGGLQDALDVAKAIALG--ASCTGMAGHFLKAL 287 (349)
T ss_dssp ESSCCSHHHHHHHHHTT--CSEEEECHHHHHHH
T ss_pred ECCCCCHHHHHHHHHcC--CCEEEEcHHHHHHH
Confidence 99999999999999987 99999999988753
No 35
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.80 E-value=1.4e-18 Score=185.48 Aligned_cols=235 Identities=15% Similarity=0.122 Sum_probs=153.7
Q ss_pred cccccCeeecCcEEeccCC--CCC----CHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecC
Q psy9514 249 NSEKKKIDWQGKLYLSPLT--TVG----NLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCG 322 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt--~~g----nlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g 322 (611)
..++.+.+|..++++|||+ +.+ ++++++.|+++|+.+++|+|... ++- + +..+..+.++.+||++
T Consensus 71 st~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~-~le-----~---v~~~~~~~~~~~QLy~ 141 (368)
T 2nli_A 71 STEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGA-TFE-----E---ISEGLNGGPRWFQIYM 141 (368)
T ss_dssp CEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSS-CHH-----H---HHHHHTTCCEEEEECC
T ss_pred ceEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhH-HHH-----H---HHHhCCCCCEEEEEec
Confidence 3577889999999999998 444 48999999999999999999862 221 1 1122235678888876
Q ss_pred -CChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEe
Q psy9514 323 -NNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDV 401 (611)
Q Consensus 323 -~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IEL 401 (611)
.++..+...++.+.. .+++.++++++||..-.- ..++. ..+..++. +..+.. .+
T Consensus 142 ~~d~~~~~~~~~ra~~-aG~~ai~it~d~p~~g~r----~~d~~---~~~~~p~~---~~~~~~---~~----------- 196 (368)
T 2nli_A 142 AKDDQQNRDILDEAKS-DGATAIILTADSTVSGNR----DRDVK---NKFVYPFG---MPIVQR---YL----------- 196 (368)
T ss_dssp BSSHHHHHHHHHHHHH-TTCSCEEEESBCC---CB----C-----------CCSC---CHHHHH---HH-----------
T ss_pred cCCHHHHHHHHHHHHH-CCCCEEEEcCCCCcccch----hHHHh---hcccCcch---hhhhhc---cc-----------
Confidence 555555555555533 346667777777652200 00000 00000000 000000 00
Q ss_pred ccCCCccceecccccccc---c--cChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 402 NLGCPIEFIYKQGSGSGL---L--QRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 402 N~gCP~~~v~~~g~GsaL---l--~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
...+.|+.+ + .++.+..++|+.+++.++.||+||.-. ..+.++++.++|+|+|+|+++
T Consensus 197 ---------~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~--------~~e~a~~a~~~Gad~I~vs~~ 259 (368)
T 2nli_A 197 ---------RGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQ--------HPEDADMAIKRGASGIWVSNH 259 (368)
T ss_dssp ---------TTSGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEEC--------SHHHHHHHHHTTCSEEEECCG
T ss_pred ---------ccCCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcCC--------CHHHHHHHHHcCCCEEEEcCC
Confidence 012345554 2 367778889999999999999999431 246688999999999999765
Q ss_pred ccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEe
Q psy9514 477 TREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGN 555 (611)
Q Consensus 477 ~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgn 555 (611)
.+.+. +.+++.|+.+.++.+... ++|||++
T Consensus 260 ggr~~-------------------------------------------------~~g~~~~~~l~~v~~~v~~~ipVia~ 290 (368)
T 2nli_A 260 GARQL-------------------------------------------------YEAPGSFDTLPAIAERVNKRVPIVFD 290 (368)
T ss_dssp GGTSC-------------------------------------------------SSCCCHHHHHHHHHHHHTTSSCEEEC
T ss_pred CcCCC-------------------------------------------------CCCCChHHHHHHHHHHhCCCCeEEEE
Confidence 43222 345667777877766543 6999999
Q ss_pred cCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 556 GDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 556 GgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
|||.+.+|+.+++..| ||+|||||++|.
T Consensus 291 GGI~~g~D~~kalalG--Ad~V~iGr~~l~ 318 (368)
T 2nli_A 291 SGVRRGEHVAKALASG--ADVVALGRPVLF 318 (368)
T ss_dssp SSCCSHHHHHHHHHTT--CSEEEECHHHHH
T ss_pred CCCCCHHHHHHHHHcC--CCEEEECHHHHH
Confidence 9999999999999987 999999996654
No 36
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.75 E-value=2.1e-17 Score=177.82 Aligned_cols=243 Identities=17% Similarity=0.125 Sum_probs=155.5
Q ss_pred cccccCeeecCcEEeccCCCCCCH-------HHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEec
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNL-------PFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLC 321 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnl-------pfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~ 321 (611)
..++.+.++..++++||| +++.+ .+++.|.++|+.+++|+|... ++- + +..+..+.++.+||+
T Consensus 85 st~i~G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~-~le-----~---v~~~~~~~~~~~QLy 154 (392)
T 2nzl_A 85 STSVLGQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS-SIE-----E---VAEAGPEALRWLQLY 154 (392)
T ss_dssp CEEETTEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS-CHH-----H---HHHHCTTSEEEEEEC
T ss_pred ceEECCEecCCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH-HHH-----H---HHHhcCCCcEEEEEE
Confidence 356788999999999999 45554 499999999999999998852 221 1 122323578899998
Q ss_pred C-CChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEE
Q psy9514 322 G-NNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVD 400 (611)
Q Consensus 322 g-~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IE 400 (611)
+ .++.......+.+.. .+++.++++++||..- .. ..++.. ...+...+...+.... +. +
T Consensus 155 ~~~d~~~~~~~~~ra~~-~G~~al~itvd~p~~g-~R---~~d~r~-~~~lp~~~~~~n~~~~--~~-------~----- 214 (392)
T 2nzl_A 155 IYKDREVTKKLVRQAEK-MGYKAIFVTVDTPYLG-NR---LDDVRN-RFKLPPQLRMKNFETS--TL-------S----- 214 (392)
T ss_dssp CBSSHHHHHHHHHHHHH-TTCCCEEEECSCSSCC-CC---HHHHHH-TCCCCTTCCCTTC--------------------
T ss_pred ecCCHHHHHHHHHHHHH-CCCCEEEEeCCCCCcc-ch---hHhHhh-ccCCccccchhhhhhh--hc-------c-----
Confidence 6 566666666666543 4678888999998741 00 000000 0000000000000000 00 0
Q ss_pred eccCCCccceecccccc---cccc---ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 401 VNLGCPIEFIYKQGSGS---GLLQ---RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 401 LN~gCP~~~v~~~g~Gs---aLl~---r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
.-|..+. +.|+ +++. ++++..++|+.+++.++.||+||.-. ..+.++.++++|+|+|+|+
T Consensus 215 ---~~p~~~~---~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~--------~~e~A~~a~~aGad~I~vs 280 (392)
T 2nzl_A 215 ---FSPEENF---GDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGIL--------RGDDAREAVKHGLNGILVS 280 (392)
T ss_dssp -----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEEC--------CHHHHHHHHHTTCCEEEEC
T ss_pred ---cCccccc---cCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecC--------CHHHHHHHHHcCCCEEEeC
Confidence 0000000 1122 2434 77777888999999999999999431 1356889999999999997
Q ss_pred ccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEE
Q psy9514 475 GRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLY 553 (611)
Q Consensus 475 gR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVI 553 (611)
++.+.+. +.+++.|+.+.++.+... ++|||
T Consensus 281 ~~ggr~~-------------------------------------------------~~g~~~~~~l~~v~~av~~~ipVi 311 (392)
T 2nzl_A 281 NHGARQL-------------------------------------------------DGVPATIDVLPEIVEAVEGKVEVF 311 (392)
T ss_dssp CGGGTSS-------------------------------------------------TTCCCHHHHHHHHHHHHTTSSEEE
T ss_pred CCCCCcC-------------------------------------------------CCCcChHHHHHHHHHHcCCCCEEE
Confidence 7653222 345667777777766543 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 554 GNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 554 gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
++|||.|.+|+.+++..| ||+|||||++|..
T Consensus 312 a~GGI~~g~Dv~kalalG--Ad~V~iGr~~l~~ 342 (392)
T 2nzl_A 312 LDGGVRKGTDVLKALALG--AKAVFVGRPIVWG 342 (392)
T ss_dssp ECSSCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred EECCCCCHHHHHHHHHhC--CCeeEECHHHHHH
Confidence 999999999999999987 9999999987754
No 37
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.74 E-value=8e-17 Score=172.15 Aligned_cols=238 Identities=16% Similarity=0.127 Sum_probs=153.5
Q ss_pred cccccCeeecCcEEeccCCCCCCHH-------HHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEec
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGNLP-------FRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLC 321 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gnlp-------fRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~ 321 (611)
..++.+.++..++++||| .+++++ +++.|+++|+.+++|+|.... + ..+.... +.+..+||+
T Consensus 62 ~t~i~G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~-i--------eev~~~~-~~~~~~QLy 130 (370)
T 1gox_A 62 TTTILGFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS-V--------EEVASTG-PGIRFFQLY 130 (370)
T ss_dssp CEEETTEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC-H--------HHHHTTC-CCCEEEEEC
T ss_pred ceEECCcccCCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC-H--------HHHHhhc-CCCceEEEe
Confidence 456778899999999999 677776 999999999999999988642 1 1111121 257788985
Q ss_pred -CCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCcccccc-ccceeeecccCchHHHHHHHHHHHHhcccceE
Q psy9514 322 -GNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQR-ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFV 399 (611)
Q Consensus 322 -g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~-~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~I 399 (611)
+.+++.....++.+.. .+++.++++++||..... ...+... ..++.+ ...+.. +
T Consensus 131 ~~~d~~~~~~~~~~a~~-~G~~ai~it~d~p~~g~r----~~d~r~~~~~p~~~--~~~~~~---~-------------- 186 (370)
T 1gox_A 131 VYKDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRR----EADIKNRFVLPPFL--TLKNFE---G-------------- 186 (370)
T ss_dssp CBSSHHHHHHHHHHHHH-TTCCEEEEECSCSSCCCC----HHHHHTTCCCCTTC--CCGGGS---S--------------
T ss_pred cCCCchHHHHHHHHHHH-CCCCEEEEeCCCCccccc----HHHHHhccCCCccc--chhhhh---h--------------
Confidence 7777666666665533 567788888888754200 0000000 000000 000000 0
Q ss_pred EeccCCCccceecccccccc------ccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 400 DVNLGCPIEFIYKQGSGSGL------LQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 400 ELN~gCP~~~v~~~g~GsaL------l~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
-+.. ....+.|+.+ +.++.+..++|+.+++.+++||.+|.+.. .+.++.+.++|+|+|.|
T Consensus 187 -----~~~~-~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~--------~e~a~~a~~~Gad~I~v 252 (370)
T 1gox_A 187 -----IDLG-KMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVIT--------AEDARLAVQHGAAGIIV 252 (370)
T ss_dssp -----SCCC----------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCS--------HHHHHHHHHTTCSEEEE
T ss_pred -----hhhh-ccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCC--------HHHHHHHHHcCCCEEEE
Confidence 0000 0001223333 34566666779999999999999997632 25678899999999999
Q ss_pred EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcE
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPL 552 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPV 552 (611)
++....+. +..++.++.+.++.+... ++||
T Consensus 253 s~~ggr~~-------------------------------------------------~~~~~~~~~l~~v~~~~~~~ipv 283 (370)
T 1gox_A 253 SNHGARQL-------------------------------------------------DYVPATIMALEEVVKAAQGRIPV 283 (370)
T ss_dssp CCGGGTSS-------------------------------------------------TTCCCHHHHHHHHHHHTTTSSCE
T ss_pred CCCCCccC-------------------------------------------------CCcccHHHHHHHHHHHhCCCCEE
Confidence 54321111 234567788888776543 7999
Q ss_pred EEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 553 YGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 553 IgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
|++|||.+.+|+.+++..| ||+|||||++|..
T Consensus 284 ia~GGI~~~~D~~k~l~~G--AdaV~iGr~~l~~ 315 (370)
T 1gox_A 284 FLDGGVRRGTDVFKALALG--AAGVFIGRPVVFS 315 (370)
T ss_dssp EEESSCCSHHHHHHHHHHT--CSEEEECHHHHHH
T ss_pred EEECCCCCHHHHHHHHHcC--CCEEeecHHHHHH
Confidence 9999999999999999987 9999999988864
No 38
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.72 E-value=2e-16 Score=175.44 Aligned_cols=231 Identities=16% Similarity=0.136 Sum_probs=145.5
Q ss_pred cccccCeeecCcEEeccCCC-------CCCHHHHHHHHH--cCCCEEEecCcccc-hhhcCChhhhHhHhhc-cCCCeEE
Q psy9514 249 NSEKKKIDWQGKLYLSPLTT-------VGNLPFRRLCKK--WGADITCSEMAVAT-ELLKSSPQEWALIKRH-ESEDLFG 317 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~-------~gnlpfRrl~~~--~Ga~li~tEm~~~~-~l~~g~~~e~~l~~~h-~~e~~~~ 317 (611)
..++.+.++..++++|||+. .+++++++.|++ +|+.+++|||+... ..+. ... ..+.++.
T Consensus 180 st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~---------~~~~~~~~~~~ 250 (511)
T 1kbi_A 180 STDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEII---------EAAPSDKQIQW 250 (511)
T ss_dssp CEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHH---------HTCCCSSCCEE
T ss_pred ccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHH---------hhcCCCCCCeE
Confidence 46778899999999999985 357999999999 99999999995542 2110 011 1235667
Q ss_pred EEec-CCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhccc
Q psy9514 318 VQLC-GNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVV 396 (611)
Q Consensus 318 vQi~-g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~ 396 (611)
+||. +.++..+..+++.+.. .+++.+.++..||+.- .-+.++.. +
T Consensus 251 ~QLy~~~d~~~~~~~~~rae~-aG~~al~itvd~p~~g-----------------------~R~~~~r~---------g- 296 (511)
T 1kbi_A 251 YQLYVNSDRKITDDLVKNVEK-LGVKALFVTVDAPSLG-----------------------QREKDMKL---------K- 296 (511)
T ss_dssp EEECCCSSHHHHHHHHHHHHH-HTCSCEEEECSCSSCC-----------------------CCHHHHHH---------H-
T ss_pred EEEeecCCHHHHHHHHHHHHH-cCCCEEEEeCCCCCcc-----------------------ccHHHHhc---------c-
Confidence 7876 6666655555544433 2334333333344310 00000000 0
Q ss_pred ceEEeccCCCcccee-------ccccc-cccc---cChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHH
Q psy9514 397 DFVDVNLGCPIEFIY-------KQGSG-SGLL---QRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRD 465 (611)
Q Consensus 397 D~IELN~gCP~~~v~-------~~g~G-saLl---~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~ 465 (611)
+.+|...+. ..+.| +.++ .++.+..++|+.+++.+++||+||.-. . .+.++++++
T Consensus 297 ------~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~----~----~e~A~~a~~ 362 (511)
T 1kbi_A 297 ------FSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQ----R----TEDVIKAAE 362 (511)
T ss_dssp ------HTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEEC----S----HHHHHHHHH
T ss_pred ------CCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCC----C----HHHHHHHHH
Confidence 001100011 01112 1233 477777889999999999999999321 1 456888999
Q ss_pred cCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHh
Q psy9514 466 WGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQ 545 (611)
Q Consensus 466 aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k 545 (611)
+|+|+|+|++..+-|.+ ...+.|+.+.++.+
T Consensus 363 aGad~I~vs~hgG~~~d-------------------------------------------------~~~~~~~~l~~v~~ 393 (511)
T 1kbi_A 363 IGVSGVVLSNHGGRQLD-------------------------------------------------FSRAPIEVLAETMP 393 (511)
T ss_dssp TTCSEEEECCTTTTSST-------------------------------------------------TCCCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCccCC-------------------------------------------------CCCchHHHHHHHHH
Confidence 99999999654322322 22334555555544
Q ss_pred hC------CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 546 LC------SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 546 ~~------~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
.. .++|||++|||.|.+|+.++|..| ||+|||||++|...
T Consensus 394 ~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalG--AdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 394 ILEQRNLKDKLEVFVDGGVRRGTDVLKALCLG--AKGVGLGRPFLYAN 439 (511)
T ss_dssp HHHTTTCBTTBEEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHHHH
T ss_pred HHHhhccCCCcEEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHHHH
Confidence 33 379999999999999999999998 99999999777543
No 39
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.71 E-value=8.2e-17 Score=169.59 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=146.8
Q ss_pred cccccCeeecCcEEeccCCCCCC------HHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecC
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTVGN------LPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCG 322 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~gn------lpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g 322 (611)
..++.+.+|++++++|||+..+. .++++.|+++|+.++++||..+ +..-....|.-++....+.+++..
T Consensus 49 ~~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~~~~~ql~~~~~d~pv~~~--- 123 (332)
T 1vcf_A 49 TTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEALRSFRVRKVAPKALLIAN--- 123 (332)
T ss_dssp CEEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTTHHHHCCTTTCSSSCEEEE---
T ss_pred ceEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCccceEEeeccCCCceeecc---
Confidence 45678899999999999987553 5999999999999999999875 221111112111111101111000
Q ss_pred CChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEec
Q psy9514 323 NNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVN 402 (611)
Q Consensus 323 ~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN 402 (611)
.-..|+++.+++.+.++++.+ +++++++|
T Consensus 124 -----------------------------------------------~~~~q~~~~~~~~~~~a~~~~----~~~a~~i~ 152 (332)
T 1vcf_A 124 -----------------------------------------------LGLAQLRRYGRDDLLRLVEML----EADALAFH 152 (332)
T ss_dssp -----------------------------------------------EEGGGGGTCCHHHHHHHHHHH----TCSEEEEE
T ss_pred -----------------------------------------------cChhhhhccChHHHHHHHhhc----CCCceeec
Confidence 012466777778777776654 57777776
Q ss_pred cCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE--Ecccccc
Q psy9514 403 LGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL--HGRTREQ 480 (611)
Q Consensus 403 ~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv--hgR~r~q 480 (611)
..+..... . .+.. +.+.+.++++++++ +++||+||. ++.. .+.+.++.+.++|+|+|+| ||++.
T Consensus 153 ~n~~~~~~-~---~~~~--~~~~~~~~i~~vr~-~~~Pv~vK~-v~~g----~~~e~a~~~~~~G~d~I~vs~~ggt~-- 218 (332)
T 1vcf_A 153 VNPLQEAV-Q---RGDT--DFRGLVERLAELLP-LPFPVMVKE-VGHG----LSREAALALRDLPLAAVDVAGAGGTS-- 218 (332)
T ss_dssp CCHHHHHH-T---TSCC--CCTTHHHHHHHHCS-CSSCEEEEC-SSSC----CCHHHHHHHTTSCCSEEECCCBTSCC--
T ss_pred cchHHHHh-c---CCCc--cHHHHHHHHHHHHc-CCCCEEEEe-cCCC----CCHHHHHHHHHcCCCEEEeCCCCCCc--
Confidence 65432111 0 1111 11236788999999 999999994 2221 1234578899999999999 44431
Q ss_pred ccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCC
Q psy9514 481 RYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILS 560 (611)
Q Consensus 481 r~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s 560 (611)
|..+..... . +.+ ++ ....+.+.+.++.+.++.+...++|||++|||.|
T Consensus 219 -------~~~~~~~r~--------------~--~~~-------~~-~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~ 267 (332)
T 1vcf_A 219 -------WARVEEWVR--------------F--GEV-------RH-PELCEIGIPTARAILEVREVLPHLPLVASGGVYT 267 (332)
T ss_dssp -------HHHHHHTC--------------------------------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCS
T ss_pred -------chhHHHhhc--------------c--ccc-------hh-hhHhhccccHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 111100000 0 000 00 0001345567888888877654799999999999
Q ss_pred HHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 561 YEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 561 ~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
++|+.+++..| ||+|||||++|..+
T Consensus 268 ~~d~~kal~~G--Ad~V~igr~~l~~~ 292 (332)
T 1vcf_A 268 GTDGAKALALG--ADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHHHHHHHT--CSEEEECGGGHHHH
T ss_pred HHHHHHHHHhC--CChHhhhHHHHHHH
Confidence 99999999997 99999999988644
No 40
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.66 E-value=4.6e-15 Score=156.19 Aligned_cols=205 Identities=15% Similarity=0.164 Sum_probs=143.0
Q ss_pred eeecCcEEeccCCCCCCHHHHHHHHHcCC-CEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHHHHH
Q psy9514 255 IDWQGKLYLSPLTTVGNLPFRRLCKKWGA-DITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTKCTQ 333 (611)
Q Consensus 255 l~l~nrivlAPMt~~gnlpfRrl~~~~Ga-~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~~a~ 333 (611)
+.+++++++|||.++++..+...+.+.|+ +++.++++....+. .....++.. .+.+++||++..
T Consensus 9 l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~----~~i~~i~~~-~~~p~gvnl~~~---------- 73 (332)
T 2z6i_A 9 LKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVK----ANIDKIKSL-TDKPFGVNIMLL---------- 73 (332)
T ss_dssp HTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHH----HHHHHHHHH-CCSCEEEEECTT----------
T ss_pred hCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHH----HHHHHHHHh-cCCCEEEEecCC----------
Confidence 34789999999999999999999988886 88888764332221 011111111 123445554432
Q ss_pred HHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceecc
Q psy9514 334 LLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQ 413 (611)
Q Consensus 334 ~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~ 413 (611)
++. +.+.++.+. ..|+|+|++|++||.
T Consensus 74 ---------------------------------------------~~~-~~~~~~~a~-~~g~d~V~~~~g~p~------ 100 (332)
T 2z6i_A 74 ---------------------------------------------SPF-VEDIVDLVI-EEGVKVVTTGAGNPS------ 100 (332)
T ss_dssp ---------------------------------------------STT-HHHHHHHHH-HTTCSEEEECSSCGG------
T ss_pred ---------------------------------------------CCC-HHHHHHHHH-HCCCCEEEECCCChH------
Confidence 221 222333332 359999999999982
Q ss_pred ccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHH
Q psy9514 414 GSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEK 493 (611)
Q Consensus 414 g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~ 493 (611)
++++.+++ .++|+.+++. ..+.++.+++.|+|+|.++|+... .
T Consensus 101 --------------~~i~~l~~-~g~~v~~~v~---------~~~~a~~~~~~GaD~i~v~g~~~G-G------------ 143 (332)
T 2z6i_A 101 --------------KYMERFHE-AGIIVIPVVP---------SVALAKRMEKIGADAVIAEGMEAG-G------------ 143 (332)
T ss_dssp --------------GTHHHHHH-TTCEEEEEES---------SHHHHHHHHHTTCSCEEEECTTSS-E------------
T ss_pred --------------HHHHHHHH-cCCeEEEEeC---------CHHHHHHHHHcCCCEEEEECCCCC-C------------
Confidence 24556665 3788887751 235677888999999999876311 1
Q ss_pred HhhhcccCchhhhhcchhhHhcCCceEEecccccccccc-CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCC
Q psy9514 494 CAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT-KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSP 572 (611)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~-~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~ 572 (611)
+. ....|..+.++.+. .++|||++|||.+++++.+++..|
T Consensus 144 -------------------------------------~~g~~~~~~ll~~i~~~-~~iPViaaGGI~~~~~~~~al~~G- 184 (332)
T 2z6i_A 144 -------------------------------------HIGKLTTMTLVRQVATA-ISIPVIAAGGIADGEGAAAGFMLG- 184 (332)
T ss_dssp -------------------------------------ECCSSCHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHTT-
T ss_pred -------------------------------------CCCCccHHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcC-
Confidence 11 23567778877665 489999999999999999999987
Q ss_pred CccEEEEcHHhhhCCchH------HHHHcccCCCcccc
Q psy9514 573 SISGVMIGRGALIKPWIF------QEIKEKKLFDIYAI 604 (611)
Q Consensus 573 ~aD~VmIGRgaL~dP~lf------~ei~~g~~~dis~~ 604 (611)
+|+|++||+++.+|+.. +.+.+++..|+.-+
T Consensus 185 -AdgV~vGs~~l~~~e~~~~~~~k~~~~~~~~~d~~~~ 221 (332)
T 2z6i_A 185 -AEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTIS 221 (332)
T ss_dssp -CSEEEECHHHHTBTTCCSCHHHHHHHHHCCTTCEEEE
T ss_pred -CCEEEecHHHhcCccccccHHHHHHHHhCCCcCEEEE
Confidence 99999999999999877 88888888887654
No 41
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.60 E-value=1.4e-14 Score=154.46 Aligned_cols=241 Identities=15% Similarity=0.112 Sum_probs=144.5
Q ss_pred ccccCeeecCcEEeccCCCCCCHHH------HHHHHHcCCCEEEecCccc--chhhcCChhhhHhHhhccCCCeEEEEec
Q psy9514 250 SEKKKIDWQGKLYLSPLTTVGNLPF------RRLCKKWGADITCSEMAVA--TELLKSSPQEWALIKRHESEDLFGVQLC 321 (611)
Q Consensus 250 ~ei~~l~l~nrivlAPMt~~gnlpf------Rrl~~~~Ga~li~tEm~~~--~~l~~g~~~e~~l~~~h~~e~~~~vQi~ 321 (611)
.++.+.+|+.++++||||+.+..++ +++|+++|+.+.++||..+ +|.... ....++.+..+.++..
T Consensus 51 t~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~---s~~~vr~~ap~~~~~a--- 124 (368)
T 3vkj_A 51 TKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARE---SFAIVRKVAPTIPIIA--- 124 (368)
T ss_dssp EEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSH---HHHHHHHHCSSSCEEE---
T ss_pred eEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHh---hHHHHHHhCcCcceec---
Confidence 4677999999999999999888774 8999999999999999554 333211 1111111111111110
Q ss_pred CCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeeccc-CchHHHHHHHHHHHHhcccceEE
Q psy9514 322 GNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCG-NNPYVLTKCTQLLEEQMVVDFVD 400 (611)
Q Consensus 322 g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g-~~p~~~~~aA~~l~~~~g~D~IE 400 (611)
|. -.+|+.+ .+++.+.++++.+ .+++..|+
T Consensus 125 -------------------------nl----------------------g~~ql~~~~~~~~~~~av~~~--~a~al~Ih 155 (368)
T 3vkj_A 125 -------------------------NL----------------------GMPQLVKGYGLKEFQDAIQMI--EADAIAVH 155 (368)
T ss_dssp -------------------------EE----------------------EGGGGGTTCCHHHHHHHHHHT--TCSEEEEE
T ss_pred -------------------------Cc----------------------CeeecCCCCCHHHHHHHHHHh--cCCCeEEE
Confidence 11 1235555 5566666666655 23444455
Q ss_pred eccCCCccceeccccccccccChH-HHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccc
Q psy9514 401 VNLGCPIEFIYKQGSGSGLLQRAN-ILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTRE 479 (611)
Q Consensus 401 LN~gCP~~~v~~~g~GsaLl~r~~-~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~ 479 (611)
||.... +.. ..|. .+.. ...++|+.+++.+++||+||. +|+.-. .+.++.+.++|+++|+|+|+.+.
T Consensus 156 ln~~~~---~~~-p~g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~s----~~~A~~l~~aGad~I~V~g~GGt 223 (368)
T 3vkj_A 156 LNPAQE---VFQ-PEGE---PEYQIYALEKLRDISKELSVPIIVKE-SGNGIS----METAKLLYSYGIKNFDTSGQGGT 223 (368)
T ss_dssp CCHHHH---HHS-SSCC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCCC----HHHHHHHHHTTCCEEECCCBTSB
T ss_pred ecchhh---hhC-CCCC---chhhHHHHHHHHHHHHHcCCCEEEEe-CCCCCC----HHHHHHHHhCCCCEEEEeCCCCC
Confidence 553221 111 0111 1111 367788999999999999996 543222 36788999999999999665211
Q ss_pred cccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCC
Q psy9514 480 QRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDIL 559 (611)
Q Consensus 480 qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~ 559 (611)
.|..|.....+... .....+...+.+ .+.+....+.++.+...++|||++|||.
T Consensus 224 -------~~~~iE~~R~~~~~--~~~~~~~~~~~~-----------------~g~pt~~~l~~v~~~~~~ipvia~GGI~ 277 (368)
T 3vkj_A 224 -------NWIAIEMIRDIRRG--NWKAESAKNFLD-----------------WGVPTAASIMEVRYSVPDSFLVGSGGIR 277 (368)
T ss_dssp -------CHHHHHHHHHHHTT--CTHHHHHHHTTT-----------------CSCBHHHHHHHHHHHSTTCEEEEESSCC
T ss_pred -------cccchhhhhccccc--ccchhhcccccc-----------------ccccHHHHHHHHHHHcCCCcEEEECCCC
Confidence 23333322211000 000000000111 1222335566666665569999999999
Q ss_pred CHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 560 SYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 560 s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
|+.|+.+++..| ||+|||||++|.
T Consensus 278 ~~~d~~kal~lG--A~~v~ig~~~l~ 301 (368)
T 3vkj_A 278 SGLDAAKAIALG--ADIAGMALPVLK 301 (368)
T ss_dssp SHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CHHHHHHHHHcC--CCEEEEcHHHHH
Confidence 999999999998 999999998884
No 42
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.55 E-value=4.4e-14 Score=151.46 Aligned_cols=227 Identities=12% Similarity=0.076 Sum_probs=141.9
Q ss_pred cccccCeeecCcEEeccCCC--C----CCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecC
Q psy9514 249 NSEKKKIDWQGKLYLSPLTT--V----GNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCG 322 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~--~----gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g 322 (611)
..++.+++|++++++|||.. . +++++++.|.++|+.++++++... ++.. +... .+.+...||..
T Consensus 63 st~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~-~le~--------i~~~-~~~~~~fQly~ 132 (380)
T 1p4c_A 63 QAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNM-SIED--------LARQ-CDGDLWFQLYV 132 (380)
T ss_dssp CEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSS-CHHH--------HHHH-CCSCEEEEECC
T ss_pred eeEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccccC-CHHH--------HHhc-cCCCeEEEEEe
Confidence 46778999999999999954 3 789999999999999999984332 2221 1111 25677889975
Q ss_pred CChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEec
Q psy9514 323 NNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVN 402 (611)
Q Consensus 323 ~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN 402 (611)
..+.......+.+.+ .++..+-+....|.. |-...|+|
T Consensus 133 ~~~~~~~~~i~~a~~-aG~~al~vTvd~p~~-----------------------------------------g~r~~d~~ 170 (380)
T 1p4c_A 133 IHREIAQGMVLKALH-TGYTTLVLTTDVAVN-----------------------------------------GYRERDLH 170 (380)
T ss_dssp SSHHHHHHHHHHHHH-TTCCEEEEECSCSSC-----------------------------------------CCCHHHHH
T ss_pred chHHHHHHHHHHHHH-cCCCEEEEeecCccc-----------------------------------------cchhHHHh
Confidence 443333333333333 223222211111110 00001122
Q ss_pred cCCCcc---ce----------ecccccccc---cc---ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHH
Q psy9514 403 LGCPIE---FI----------YKQGSGSGL---LQ---RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKF 463 (611)
Q Consensus 403 ~gCP~~---~v----------~~~g~GsaL---l~---r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l 463 (611)
.||+.+ .. .....+.++ +. +|.+..++|+.+++.+++||+||.- .+.+.++.+
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv--------~t~e~a~~a 242 (380)
T 1p4c_A 171 NRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGL--------LSAEDADRC 242 (380)
T ss_dssp HTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEE--------CCHHHHHHH
T ss_pred cCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEec--------CcHHHHHHH
Confidence 233110 00 000011111 12 6666779999999999999999942 123568899
Q ss_pred HHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHH
Q psy9514 464 RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKC 543 (611)
Q Consensus 464 ~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~ 543 (611)
.++|+|+|.|.+..+.+. +.++++++.+.++
T Consensus 243 ~~aGad~I~vs~~gg~~~-------------------------------------------------d~~~~~~~~l~~v 273 (380)
T 1p4c_A 243 IAEGADGVILSNHGGRQL-------------------------------------------------DCAISPMEVLAQS 273 (380)
T ss_dssp HHTTCSEEEECCGGGTSC-------------------------------------------------TTCCCGGGTHHHH
T ss_pred HHcCCCEEEEcCCCCCcC-------------------------------------------------CCCcCHHHHHHHH
Confidence 999999999943221122 2334567777777
Q ss_pred HhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 544 AQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 544 ~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
.+.. ++|||++|||.+.+|+.+++..| ||+|||||++|...
T Consensus 274 ~~~~-~~pVia~GGI~~~~dv~kal~~G--AdaV~iGr~~l~~~ 314 (380)
T 1p4c_A 274 VAKT-GKPVLIDSGFRRGSDIVKALALG--AEAVLLGRATLYGL 314 (380)
T ss_dssp HHHH-CSCEEECSSCCSHHHHHHHHHTT--CSCEEESHHHHHHH
T ss_pred HHHc-CCeEEEECCCCCHHHHHHHHHhC--CcHhhehHHHHHHH
Confidence 6654 67999999999999999999987 99999999998654
No 43
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.51 E-value=2.6e-13 Score=144.33 Aligned_cols=228 Identities=14% Similarity=0.133 Sum_probs=128.2
Q ss_pred ccccCeeecCcEEeccCCCCCCH------HHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCC
Q psy9514 250 SEKKKIDWQGKLYLSPLTTVGNL------PFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGN 323 (611)
Q Consensus 250 ~ei~~l~l~nrivlAPMt~~gnl------pfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~ 323 (611)
.++.+.+|+.++++|||+..+.. .+++.|+++|+.+.+++|.....-... ..+. ++|..
T Consensus 78 t~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~--~~~~-----------v~r~~-- 142 (365)
T 3sr7_A 78 THFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDD--TSYQ-----------VKKSR-- 142 (365)
T ss_dssp EEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------------------------------
T ss_pred EEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCccc--cceE-----------ehhhC--
Confidence 46678899999999999876654 499999999999999998764211000 0000 11100
Q ss_pred ChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCc-hHHHHHHHHHHHHhcccceEEec
Q psy9514 324 NPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNN-PYVLTKCTQLLEEQMVVDFVDVN 402 (611)
Q Consensus 324 ~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~-p~~~~~aA~~l~~~~g~D~IELN 402 (611)
| +.+++..+.+.. .+.+.++++. .++|+++||
T Consensus 143 ---------------------------P----------------~~~~ianig~~~~~e~~~~~ve~----~~adal~ih 175 (365)
T 3sr7_A 143 ---------------------------P----------------HLLLATNIGLDKPYQAGLQAVRD----LQPLFLQVH 175 (365)
T ss_dssp ---------------------------------------------CCEEEEEETTSCHHHHHHHHHH----HCCSCEEEE
T ss_pred ---------------------------C----------------CCcEEEEeCCCCCHHHHHHHHHh----cCCCEEEEe
Confidence 0 011222332222 2344444444 388998888
Q ss_pred cCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccccccc
Q psy9514 403 LGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRY 482 (611)
Q Consensus 403 ~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~ 482 (611)
+...+..+...| ..+.+-+.++|+.+++.+++||+||. +|+.. ..+.++.+.++|+|+|+|+|+...+
T Consensus 176 ln~~qe~~~p~G-----d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~----s~e~A~~l~~aGad~I~V~g~GGt~-- 243 (365)
T 3sr7_A 176 INLMQELLMPEG-----EREFRSWKKHLSDYAKKLQLPFILKE-VGFGM----DVKTIQTAIDLGVKTVDISGRGGTS-- 243 (365)
T ss_dssp ECHHHHHTSSSS-----CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCC----CHHHHHHHHHHTCCEEECCCBC-----
T ss_pred ccccccccCCCC-----CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCC----CHHHHHHHHHcCCCEEEEeCCCCcc--
Confidence 765332221111 12334467899999999999999994 44322 2356888999999999998763211
Q ss_pred ccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHH
Q psy9514 483 TKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYE 562 (611)
Q Consensus 483 ~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~e 562 (611)
|..|..... . ....+. -.+.+....+..+.....++|||++|||.|..
T Consensus 244 -----~a~ie~~r~-------~---~~~~~~-----------------~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~ 291 (365)
T 3sr7_A 244 -----FAYIENRRG-------G---NRSYLN-----------------QWGQTTAQVLLNAQPLMDKVEILASGGIRHPL 291 (365)
T ss_dssp --------------------------CGGGT-----------------TCSCBHHHHHHHHGGGTTTSEEEECSSCCSHH
T ss_pred -----cchhhcccc-------c---cccccc-----------------cccccHHHHHHHHHHhcCCCeEEEeCCCCCHH
Confidence 100000000 0 000000 01223334555543323479999999999999
Q ss_pred HHHHHHHcCCCccEEEEcHHhhh
Q psy9514 563 DYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 563 da~~~l~~G~~aD~VmIGRgaL~ 585 (611)
|+.+++..| ||+|||||++|.
T Consensus 292 Dv~KaLalG--AdaV~ig~~~l~ 312 (365)
T 3sr7_A 292 DIIKALVLG--AKAVGLSRTMLE 312 (365)
T ss_dssp HHHHHHHHT--CSEEEESHHHHH
T ss_pred HHHHHHHcC--CCEEEECHHHHH
Confidence 999999998 999999998885
No 44
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.50 E-value=5.1e-13 Score=140.89 Aligned_cols=199 Identities=13% Similarity=0.135 Sum_probs=131.6
Q ss_pred ccccCeeecCcEEeccCCCCCCHHHHH-HHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhH
Q psy9514 250 SEKKKIDWQGKLYLSPLTTVGNLPFRR-LCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVL 328 (611)
Q Consensus 250 ~ei~~l~l~nrivlAPMt~~gnlpfRr-l~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~ 328 (611)
.++.++.+++++++|||++++..++.+ ++..+|.++++++|.-.. ..+++
T Consensus 38 t~i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~---------~~~i~-------------------- 88 (336)
T 1ypf_A 38 VTLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKR---------ISFIR-------------------- 88 (336)
T ss_dssp EEETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGH---------HHHHH--------------------
T ss_pred EEECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHH---------HHHHH--------------------
Confidence 466789999999999999999999965 677778898887653110 00011
Q ss_pred HHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcc--cceEEeccCCC
Q psy9514 329 TKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMV--VDFVDVNLGCP 406 (611)
Q Consensus 329 ~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g--~D~IELN~gCP 406 (611)
+ +.+. +. ++++|+ |..++.+..+ +.+. ..+ ++.|+||+++
T Consensus 89 -~----~~~~----------g~-------------------~v~v~~-g~~~~~~~~a-~~~~-~~g~~~~~i~i~~~~- 130 (336)
T 1ypf_A 89 -D----MQSR----------GL-------------------IASISV-GVKEDEYEFV-QQLA-AEHLTPEYITIDIAH- 130 (336)
T ss_dssp -H----HHHT----------TC-------------------CCEEEE-CCSHHHHHHH-HHHH-HTTCCCSEEEEECSS-
T ss_pred -H----HHhc----------CC-------------------eEEEeC-CCCHHHHHHH-HHHH-hcCCCCCEEEEECCC-
Confidence 0 0000 11 233442 3444444333 3332 235 8999998742
Q ss_pred ccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE--Eccccc-cccc
Q psy9514 407 IEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL--HGRTRE-QRYT 483 (611)
Q Consensus 407 ~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv--hgR~r~-qr~~ 483 (611)
| ++....++|+.+++.++.|+.++-- . ...+.++++.++|+|+|.+ |+++.. ++
T Consensus 131 ---------G-----~~~~~~~~i~~lr~~~~~~~vi~G~--v-----~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~-- 187 (336)
T 1ypf_A 131 ---------G-----HSNAVINMIQHIKKHLPESFVIAGN--V-----GTPEAVRELENAGADATKVGIGPGKVCITK-- 187 (336)
T ss_dssp ---------C-----CSHHHHHHHHHHHHHCTTSEEEEEE--E-----CSHHHHHHHHHHTCSEEEECSSCSTTCHHH--
T ss_pred ---------C-----CcHHHHHHHHHHHHhCCCCEEEECC--c-----CCHHHHHHHHHcCCCEEEEecCCCceeecc--
Confidence 2 5677889999999998644444411 1 1236788999999999999 443210 00
Q ss_pred cCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc--cHHHHHHHHhhCCCCcEEEecCCCCH
Q psy9514 484 KQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA--DWDYIEKCAQLCSPAPLYGNGDILSY 561 (611)
Q Consensus 484 ~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a--~~~~i~~~~k~~~~iPVIgnGgI~s~ 561 (611)
.. .+.+.+ .+..+.++++.. ++|||++|||.|.
T Consensus 188 ---------------------------~~-----------------~~~g~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g 222 (336)
T 1ypf_A 188 ---------------------------IK-----------------TGFGTGGWQLAALRWCAKAA-SKPIIADGGIRTN 222 (336)
T ss_dssp ---------------------------HH-----------------HSCSSTTCHHHHHHHHHHTC-SSCEEEESCCCST
T ss_pred ---------------------------cc-----------------cCcCCchhHHHHHHHHHHHc-CCcEEEeCCCCCH
Confidence 00 012223 567888887654 9999999999999
Q ss_pred HHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 562 EDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 562 eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
.|+.+++..| ||+|||||++|.
T Consensus 223 ~Dv~kalalG--AdaV~iGr~~l~ 244 (336)
T 1ypf_A 223 GDVAKSIRFG--ATMVMIGSLFAG 244 (336)
T ss_dssp HHHHHHHHTT--CSEEEESGGGTT
T ss_pred HHHHHHHHcC--CCEEEeChhhhc
Confidence 9999999987 999999999994
No 45
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.48 E-value=3.2e-13 Score=134.77 Aligned_cols=146 Identities=12% Similarity=0.079 Sum_probs=104.9
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEE--eccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEE---
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVD--VNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKT--- 445 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IE--LN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKi--- 445 (611)
+++|+.++.+..+..+. ..|+|+|| +|+||- + ..++..+.+.++++++.++ |+++|+
T Consensus 64 ~g~~~~~~k~~~~~~A~-----~~Gad~Id~viN~g~~-----~-------~~~~~~~~~~i~~v~~a~~-pv~vKvi~e 125 (225)
T 1mzh_A 64 LGLNKTSVKVKEAVEAV-----RDGAQELDIVWNLSAF-----K-------SEKYDFVVEELKEIFRETP-SAVHKVIVE 125 (225)
T ss_dssp TCCSCHHHHHHHHHHHH-----HTTCSEEEEECCHHHH-----H-------TTCHHHHHHHHHHHHHTCT-TSEEEEECC
T ss_pred CCccchhhhHHHHHHHH-----HcCCCEEEEEecHHHH-----h-------cCChHHHHHHHHHHHHHhc-CceEEEEEe
Confidence 34455555544443332 24999999 799882 1 1234667788999999888 999999
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
+.+++ .+...++++.++++|+|+|.+ ++ ..
T Consensus 126 ~~~l~--~~~~~~~a~~a~eaGad~I~t--st--g~-------------------------------------------- 155 (225)
T 1mzh_A 126 TPYLN--EEEIKKAVEICIEAGADFIKT--ST--GF-------------------------------------------- 155 (225)
T ss_dssp GGGCC--HHHHHHHHHHHHHHTCSEEEC--CC--SC--------------------------------------------
T ss_pred CCCCC--HHHHHHHHHHHHHhCCCEEEE--CC--CC--------------------------------------------
Confidence 55443 246788999999999999822 22 11
Q ss_pred cccccccCCccHHHHHHHHhhC-CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLC-SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~-~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.+.+.|+.++.+.+.. .++||+++|||.|++|+.++++.| +|.|.++++ .++++++++
T Consensus 156 -----~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aG--A~~iG~s~~----~~i~~~~~~ 215 (225)
T 1mzh_A 156 -----APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAG--ADRIGTSSG----ISIAEEFLK 215 (225)
T ss_dssp -----SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT--CSEEEESCH----HHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhC--chHHHHccH----HHHHHHHHh
Confidence 33456777777776553 379999999999999999999987 998777766 467777665
No 46
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.41 E-value=2e-11 Score=128.10 Aligned_cols=133 Identities=12% Similarity=0.101 Sum_probs=99.9
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|+|+|.+|++|| .++++.+++. ++|+.+++. +.+.+..+.+.|+|+|.+
T Consensus 95 ~g~d~V~~~~g~p--------------------~~~~~~l~~~-gi~vi~~v~---------t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 95 AGIRVVETAGNDP--------------------GEHIAEFRRH-GVKVIHKCT---------AVRHALKAERLGVDAVSI 144 (328)
T ss_dssp TTCCEEEEEESCC--------------------HHHHHHHHHT-TCEEEEEES---------SHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEcCCCc--------------------HHHHHHHHHc-CCCEEeeCC---------CHHHHHHHHHcCCCEEEE
Confidence 4899999999887 2345566554 778876542 124466788999999999
Q ss_pred EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEE
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLY 553 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVI 553 (611)
+|+..... .| .....+|..+.++.+. .++|||
T Consensus 145 ~g~~~GG~-----------------------------------------~G------~~~~~~~~~l~~v~~~-~~iPvi 176 (328)
T 2gjl_A 145 DGFECAGH-----------------------------------------PG------EDDIPGLVLLPAAANR-LRVPII 176 (328)
T ss_dssp ECTTCSBC-----------------------------------------CC------SSCCCHHHHHHHHHTT-CCSCEE
T ss_pred ECCCCCcC-----------------------------------------CC------CccccHHHHHHHHHHh-cCCCEE
Confidence 87652110 00 0123578888887664 589999
Q ss_pred EecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc------hHHHHHcccCCCcccccc
Q psy9514 554 GNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW------IFQEIKEKKLFDIYAIVW 606 (611)
Q Consensus 554 gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~------lf~ei~~g~~~dis~~e~ 606 (611)
+.|||.+++++.+++..| +|+|+|||+++..|+ +-+.+.+.+..|+..+..
T Consensus 177 aaGGI~~~~~v~~al~~G--AdgV~vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~ 233 (328)
T 2gjl_A 177 ASGGFADGRGLVAALALG--ADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMR 233 (328)
T ss_dssp EESSCCSHHHHHHHHHHT--CSEEEESHHHHTSSSSCSCHHHHHHHHHCCTTCEEEECG
T ss_pred EECCCCCHHHHHHHHHcC--CCEEEECHHHHcCccccccHHHHHHHHhcccccEEEeec
Confidence 999999999999999987 999999999999998 777787888888776543
No 47
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.41 E-value=1.1e-12 Score=131.34 Aligned_cols=154 Identities=14% Similarity=0.219 Sum_probs=115.9
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--C--CC----
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--S--LP---- 440 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~--~P---- 440 (611)
.++.+-.+-.+++++..+.+ .|+|+|-+ |+.++.+|.++.++++.+...+ + .+
T Consensus 75 ipv~v~ggi~~~~~~~~~l~-----~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~ 135 (244)
T 2y88_A 75 VQVELSGGIRDDESLAAALA-----TGCARVNV--------------GTAALENPQWCARVIGEHGDQVAVGLDVQIIDG 135 (244)
T ss_dssp SEEEEESSCCSHHHHHHHHH-----TTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CcEEEECCCCCHHHHHHHHH-----cCCCEEEE--------------CchHhhChHHHHHHHHHcCCCEEEEEeccccCC
Confidence 34455445557776555533 25666544 5677888999999999876432 2 22
Q ss_pred -EEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCce
Q psy9514 441 -ITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASL 519 (611)
Q Consensus 441 -vtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 519 (611)
.+|++| |+.+...+..++++.+++.|++.|.+|+|++.+.
T Consensus 136 ~~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~-------------------------------------- 176 (244)
T 2y88_A 136 EHRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGT-------------------------------------- 176 (244)
T ss_dssp EEEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTT--------------------------------------
T ss_pred CCEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccc--------------------------------------
Confidence 357777 6655444678888999999999999998876533
Q ss_pred EEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHc---CCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 520 ITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKK---SPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 520 itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~---G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.+ .+|+.++++.+. .++|||++|||.+++|+.++++. | +|+||+||+++.+||+|.++.+
T Consensus 177 -----------~~g-~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~G--ad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 177 -----------LGG-PNLDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRG--VEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp -----------TSC-CCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGT--EEEEEECHHHHTTSSCHHHHHH
T ss_pred -----------cCC-CCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCC--CCEEEEcHHHHCCCcCHHHHHH
Confidence 333 378888887764 58999999999999999999987 7 9999999999999999999865
No 48
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.40 E-value=1.9e-11 Score=128.28 Aligned_cols=191 Identities=13% Similarity=0.182 Sum_probs=125.4
Q ss_pred CeeecCcEEeccCCCCCCHHHHHHHHHcCC-CEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHHHH
Q psy9514 254 KIDWQGKLYLSPLTTVGNLPFRRLCKKWGA-DITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTKCT 332 (611)
Q Consensus 254 ~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga-~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~~a 332 (611)
.+.++.++++|||+++++..+...+...|+ +++.+.+.....+. .....++. ..+.+|+|++.
T Consensus 22 ~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~----~~i~~i~~-~~~~p~gVnl~----------- 85 (326)
T 3bo9_A 22 LLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLR----KAISELRQ-KTDKPFGVNII----------- 85 (326)
T ss_dssp HHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHH----HHHHHHHT-TCSSCEEEEEE-----------
T ss_pred hcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHH----HHHHHHHH-hcCCCEEEEEe-----------
Confidence 466788999999999999999999888875 67765543221110 00011111 11234444443
Q ss_pred HHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceec
Q psy9514 333 QLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYK 412 (611)
Q Consensus 333 ~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~ 412 (611)
..++. +.+.++.+. ..|+|.|.+|++||.
T Consensus 86 --------------------------------------------~~~~~-~~~~~~~~~-~~g~d~V~l~~g~p~----- 114 (326)
T 3bo9_A 86 --------------------------------------------LVSPW-ADDLVKVCI-EEKVPVVTFGAGNPT----- 114 (326)
T ss_dssp --------------------------------------------TTSTT-HHHHHHHHH-HTTCSEEEEESSCCH-----
T ss_pred --------------------------------------------ccCCC-HHHHHHHHH-HCCCCEEEECCCCcH-----
Confidence 32221 111222221 248999999998882
Q ss_pred cccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHH
Q psy9514 413 QGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIE 492 (611)
Q Consensus 413 ~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~ 492 (611)
++++.++. .++++.+++. ..+.++.+.+.|+|+|.++++.....
T Consensus 115 ---------------~~~~~l~~-~g~~v~~~v~---------s~~~a~~a~~~GaD~i~v~g~~~GG~----------- 158 (326)
T 3bo9_A 115 ---------------KYIRELKE-NGTKVIPVVA---------SDSLARMVERAGADAVIAEGMESGGH----------- 158 (326)
T ss_dssp ---------------HHHHHHHH-TTCEEEEEES---------SHHHHHHHHHTTCSCEEEECTTSSEE-----------
T ss_pred ---------------HHHHHHHH-cCCcEEEEcC---------CHHHHHHHHHcCCCEEEEECCCCCcc-----------
Confidence 23444544 3778877642 13556778899999999998642211
Q ss_pred HHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCC
Q psy9514 493 KCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSP 572 (611)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~ 572 (611)
.....+|..+.++.+. .++|||+.|||.|++++.+++..|
T Consensus 159 --------------------------------------~G~~~~~~ll~~i~~~-~~iPviaaGGI~~~~dv~~al~~G- 198 (326)
T 3bo9_A 159 --------------------------------------IGEVTTFVLVNKVSRS-VNIPVIAAGGIADGRGMAAAFALG- 198 (326)
T ss_dssp --------------------------------------CCSSCHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHT-
T ss_pred --------------------------------------CCCccHHHHHHHHHHH-cCCCEEEECCCCCHHHHHHHHHhC-
Confidence 0123577888887765 489999999999999999999987
Q ss_pred CccEEEEcHHhhhCCc
Q psy9514 573 SISGVMIGRGALIKPW 588 (611)
Q Consensus 573 ~aD~VmIGRgaL~dP~ 588 (611)
+|+|+||++++..|+
T Consensus 199 -A~gV~vGs~~~~~~e 213 (326)
T 3bo9_A 199 -AEAVQMGTRFVASVE 213 (326)
T ss_dssp -CSEEEESHHHHTBSS
T ss_pred -CCEEEechHHHcCcc
Confidence 999999999998876
No 49
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.40 E-value=6.8e-13 Score=135.20 Aligned_cols=201 Identities=9% Similarity=0.036 Sum_probs=127.3
Q ss_pred cCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccc---cccccceeeecccCchHHHHHHHHHHHHhcccc
Q psy9514 321 CGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGL---LQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVD 397 (611)
Q Consensus 321 ~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l---~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D 397 (611)
.+.+|..+++...... -..+.++||+. . .. ++ +....++.+|++|... .. .+.+.+ +|++
T Consensus 36 ~~~dp~~~A~~~~~~G-a~~l~vvDL~~--~-n~--------~~i~~i~~~~~~pv~vgGGir-~~-~~~~~l---~Ga~ 98 (260)
T 2agk_A 36 SQHPSSYYAKLYKDRD-VQGCHVIKLGP--N-ND--------DAAREALQESPQFLQVGGGIN-DT-NCLEWL---KWAS 98 (260)
T ss_dssp -CCCHHHHHHHHHHTT-CTTCEEEEESS--S-CH--------HHHHHHHHHSTTTSEEESSCC-TT-THHHHT---TTCS
T ss_pred cCCCHHHHHHHHHHcC-CCEEEEEeCCC--C-CH--------HHHHHHHhcCCceEEEeCCCC-HH-HHHHHh---cCCC
Confidence 3456776666543321 12467888874 1 11 12 2234567788888865 23 444443 3554
Q ss_pred eEEeccCCCccceeccccccccccC-----hHHHHHHHHHHH-hhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 398 FVDVNLGCPIEFIYKQGSGSGLLQR-----ANILQSVITCMN-EVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 398 ~IELN~gCP~~~v~~~g~GsaLl~r-----~~~l~eIv~av~-~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
-| -.|++++.+ |+++.++++.+. +.+-+++.+|+|-+ + | -.|
T Consensus 99 ~V--------------iigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~---~--------------g-~~V 146 (260)
T 2agk_A 99 KV--------------IVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQD---G--------------R-WIV 146 (260)
T ss_dssp CE--------------EECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEET---T--------------E-EEE
T ss_pred EE--------------EECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCC---C--------------c-eEE
Confidence 33 268899999 999999999997 44445666665511 0 0 013
Q ss_pred EEEccccccccccCcChhHHHHHhhhcccCchhhh-hcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC--
Q psy9514 472 TLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIH-NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-- 548 (611)
Q Consensus 472 tvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~-~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-- 548 (611)
.++|+..... .... +++..+.++ ++.+++|+++++|.+.++ +|+.++++.+..+
T Consensus 147 ~~~gw~~~t~---------------------~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~ 203 (260)
T 2agk_A 147 AMNKWQTLTD---------------------LELNADTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDY 203 (260)
T ss_dssp EETTTTEEEE---------------------EEESHHHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTC
T ss_pred EEcCCccccC---------------------ccHHHHHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhccc
Confidence 3344321110 1122 445566666 777777777777778775 9999999887643
Q ss_pred -CCcEEEecCCCCHHHHHHHHHc--CCCccEEEEcHHh--hhCC-chHHHHHc
Q psy9514 549 -PAPLYGNGDILSYEDYTESLKK--SPSISGVMIGRGA--LIKP-WIFQEIKE 595 (611)
Q Consensus 549 -~iPVIgnGgI~s~eda~~~l~~--G~~aD~VmIGRga--L~dP-~lf~ei~~ 595 (611)
++|||++|||.|++|+.++++. | +|+||+||++ +.+| |.|.++++
T Consensus 204 ~~iPVIasGGi~s~ed~~~l~~~~~G--~~gvivg~al~l~~g~~~~~~~~~~ 254 (260)
T 2agk_A 204 DDLKIVYAGGAKSVDDLKLVDELSHG--KVDLTFGSSLDIFGGNLVKFEDCCR 254 (260)
T ss_dssp SSCEEEEESCCCCTHHHHHHHHHHTT--CEEEECCTTBGGGTCSSBCHHHHHH
T ss_pred CCceEEEeCCCCCHHHHHHHHHhcCC--CCEEEeeCCHHHcCCCCCCHHHHHH
Confidence 8999999999999999999987 6 9999999997 9999 99999875
No 50
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=4.3e-12 Score=131.61 Aligned_cols=174 Identities=14% Similarity=0.206 Sum_probs=116.3
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|+++|-... |.+...+.+.|++++++|+.+.+|.+ ++.+||+.|+|+|+. .-++.++.+|+|+|-.
T Consensus 36 aGA~aI~~l~--~v~~d~~~~~G~arm~~p~~i~~I~~----av~iPV~~K~rig~~-------~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 36 AGAVAVMALE--RVPADIRAAGGVARMSDPALIEEIMD----AVSIPVMAKCRIGHT-------TEALVLEAIGVDMIDE 102 (330)
T ss_dssp HTCSEEEECS--SCHHHHC--CCCCCCCCHHHHHHHHH----HCSSCEEEEEETTCH-------HHHHHHHHTTCSEEEE
T ss_pred cCCCEEEecC--CccccccCCcchhhcCCHHHHHHHHH----hcCCCeEEEEeecch-------HHHHHHHHcCCCEEeh
Confidence 4999993322 77777788889999999999977754 568999999999972 4467888899999976
Q ss_pred EccccccccccCc-ChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc--------------cc------------
Q psy9514 474 HGRTREQRYTKQA-DWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG--------------RT------------ 526 (611)
Q Consensus 474 hgR~r~qr~~~~a-dw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg--------------rt------------ 526 (611)
+.+.+.......- -+.| ...+-..-....+....+ +.|+++|+.|| ||
T Consensus 103 s~~l~p~d~~~~i~k~~~----~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~ 177 (330)
T 2yzr_A 103 SEVLTQADPFFHIYKKKF----NVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMT 177 (330)
T ss_dssp ETTSCCSCSSCCCCGGGC----SSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSC
T ss_pred hccCCHHHHHHHhhhhhc----ccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCC
Confidence 6554321100000 0000 000000001123344455 78999999999 66
Q ss_pred cccccc----CCccH-------------------------------------HHHHHHHhhCCCCcE--EEecCCCCHHH
Q psy9514 527 REQRYT----KQADW-------------------------------------DYIEKCAQLCSPAPL--YGNGDILSYED 563 (611)
Q Consensus 527 r~g~~~----~~a~~-------------------------------------~~i~~~~k~~~~iPV--IgnGgI~s~ed 563 (611)
.++.+. ..++| +.++++.+. .++|| |++|||.|++|
T Consensus 178 ~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~-~~IPVV~VAeGGI~Tped 256 (330)
T 2yzr_A 178 DEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKL-GRLPVVNFAAGGVATPAD 256 (330)
T ss_dssp HHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHH-TSCSSEEEECSCCCSHHH
T ss_pred HHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHh-CCCCeEEEEECCCCCHHH
Confidence 322221 12344 777777654 47898 69999999999
Q ss_pred HHHHHHcCCCccEEEEcHHhh--hCCc
Q psy9514 564 YTESLKKSPSISGVMIGRGAL--IKPW 588 (611)
Q Consensus 564 a~~~l~~G~~aD~VmIGRgaL--~dP~ 588 (611)
+.++++.| ||+||||++++ .||.
T Consensus 257 a~~~l~~G--aDgV~VGsaI~~a~dP~ 281 (330)
T 2yzr_A 257 AALMMQLG--SDGVFVGSGIFKSENPL 281 (330)
T ss_dssp HHHHHHTT--CSCEEESHHHHTSSCHH
T ss_pred HHHHHHcC--cCEEeeHHHHhcCCCHH
Confidence 99999987 99999999999 5664
No 51
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=1.3e-11 Score=132.71 Aligned_cols=157 Identities=12% Similarity=0.066 Sum_probs=110.8
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCc-ChhHHHHHhhhccc
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA-DWDYIEKCAQLCSR 500 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~a-dw~~i~~~~~~~~~ 500 (611)
+++.+.++++.+++. +.|+.++++.. ...++++.+.++|+++|.+|++...+.+..+. .|..|..+....+-
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~------~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 212 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ------NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDV 212 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT------THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSS
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc------cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCC
Confidence 677788888888875 88999987631 23567788888999999999875433343332 78888777665321
Q ss_pred ----CchhhhhcchhhHhcCCceEEecccc----ccccccCCccHHHHHHHHhh-------CC--CCcEEEecCCCCHHH
Q psy9514 501 ----DNNIIHNFMPKFRDWGASLITLHGRT----REQRYTKQADWDYIEKCAQL-------CS--PAPLYGNGDILSYED 563 (611)
Q Consensus 501 ----~~~~~~~~~~~l~~~G~~~itihgrt----r~g~~~~~a~~~~i~~~~k~-------~~--~iPVIgnGgI~s~ed 563 (611)
......+.+..+.+.|++.|.+ |.. +.-...+.+.+..+.++.+. .. ++|||+.|||.+.+|
T Consensus 213 pvi~ggi~t~e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~d 291 (393)
T 2qr6_A 213 PVIAGGVNDYTTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGD 291 (393)
T ss_dssp CEEEECCCSHHHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHH
T ss_pred CEEECCcCCHHHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHH
Confidence 0112334567788899999998 441 11112346677888776654 32 399999999999999
Q ss_pred HHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 564 YTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 564 a~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.+++..| ||+|||||++|..+.
T Consensus 292 v~kalalG--A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 292 VVKAIACG--ADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHHHHT--CSEEEECGGGGGSTT
T ss_pred HHHHHHcC--CCEEEECHHHHcCCC
Confidence 99999998 999999999998875
No 52
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.37 E-value=6.8e-12 Score=126.81 Aligned_cols=170 Identities=14% Similarity=0.184 Sum_probs=118.5
Q ss_pred hcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 393 QMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 393 ~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.+|+.+|-...+||.+.. .. .|.+.+.+|..+ ++|++++.+||..|.|+|. ..-++.|+++|+|+|-
T Consensus 29 ~aGa~av~~l~~~p~d~r-~~-gGv~Rm~dp~~I----~~I~~aVsIPVm~k~righ-------~~EAqilea~GaD~ID 95 (291)
T 3o07_A 29 KSGACAVMALESIPADMR-KS-GKVCRMSDPKMI----KDIMNSVSIPVMAKVRIGH-------FVEAQIIEALEVDYID 95 (291)
T ss_dssp HHTCSEEEECSSCHHHHH-TT-TCCCCCCCHHHH----HHHHTTCSSCEEEEEETTC-------HHHHHHHHHTTCSEEE
T ss_pred HhCchhhhhccCCCchhh-hc-CCccccCCHHHH----HHHHHhCCCCeEEEEecCc-------HHHHHHHHHcCCCEEe
Confidence 359999999999997633 33 377889999876 5556777999999999985 3457789999999995
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchh------hhhcch--hhHhcCCceEEec---------------------
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNI------IHNFMP--KFRDWGASLITLH--------------------- 523 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~------~~~~~~--~l~~~G~~~itih--------------------- 523 (611)
-+-+. .|+|+.+ .+.+.+.. ..++-. ...+.|+++|-.+
T Consensus 96 esevl------tpad~~~------~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~ 163 (291)
T 3o07_A 96 ESEVL------TPADWTH------HIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEE 163 (291)
T ss_dssp EETTS------CCSCSSC------CCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHH
T ss_pred cccCC------CHHHHHH------HhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHH
Confidence 55432 1233211 01110000 011112 2336799999544
Q ss_pred -----cc-ccccccc----CCccHHHHHHHHhhCCCCcE--EEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh--CCch
Q psy9514 524 -----GR-TREQRYT----KQADWDYIEKCAQLCSPAPL--YGNGDILSYEDYTESLKKSPSISGVMIGRGALI--KPWI 589 (611)
Q Consensus 524 -----gr-tr~g~~~----~~a~~~~i~~~~k~~~~iPV--IgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~--dP~l 589 (611)
|. |.+..|+ -.++|+.++++.+. .++|| |+||||.|++|+.++++.| ||+||||||++. ||+.
T Consensus 164 i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~G--aDGVmVGrAI~~s~DP~~ 240 (291)
T 3o07_A 164 IKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLG--CDGVFVGSGIFKSSNPVR 240 (291)
T ss_dssp HHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTT--CSCEEECGGGGGSSCHHH
T ss_pred HHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhC--CCEEEEchHHhCCCCHHH
Confidence 44 4443222 25789999998776 58888 5799999999999999887 999999999998 4544
Q ss_pred H
Q psy9514 590 F 590 (611)
Q Consensus 590 f 590 (611)
+
T Consensus 241 ~ 241 (291)
T 3o07_A 241 L 241 (291)
T ss_dssp H
T ss_pred H
Confidence 3
No 53
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.35 E-value=1.2e-11 Score=133.54 Aligned_cols=150 Identities=12% Similarity=0.040 Sum_probs=100.6
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEcc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTG 448 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g 448 (611)
.+++.+... ++.... ++.+. ..|+|+|+||+++- +++.+.++++.+++.+ ++||.++.-
T Consensus 143 ~~~~~i~~~-~~~~~~-a~~~~-~~G~d~i~i~~~~g---------------~~~~~~e~i~~ir~~~~~~pviv~~v-- 202 (404)
T 1eep_A 143 RVGAAVSID-IDTIER-VEELV-KAHVDILVIDSAHG---------------HSTRIIELIKKIKTKYPNLDLIAGNI-- 202 (404)
T ss_dssp CCEEEECSC-TTHHHH-HHHHH-HTTCSEEEECCSCC---------------SSHHHHHHHHHHHHHCTTCEEEEEEE--
T ss_pred eEEEEeCCC-hhHHHH-HHHHH-HCCCCEEEEeCCCC---------------ChHHHHHHHHHHHHHCCCCeEEEcCC--
Confidence 355555542 233333 33332 35999999997651 3578889999999988 789887421
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTRE 528 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~ 528 (611)
...+.++.+.++|+|+|.+.+..... ..++.
T Consensus 203 ------~~~~~a~~a~~~Gad~I~vg~~~G~~-------------------------------------------~~~~~ 233 (404)
T 1eep_A 203 ------VTKEAALDLISVGADCLKVGIGPGSI-------------------------------------------CTTRI 233 (404)
T ss_dssp ------CSHHHHHHHHTTTCSEEEECSSCSTT-------------------------------------------SHHHH
T ss_pred ------CcHHHHHHHHhcCCCEEEECCCCCcC-------------------------------------------cCccc
Confidence 12367888999999999992211000 00000
Q ss_pred ccccCCccHHHHHHHHhh--CCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 529 QRYTKQADWDYIEKCAQL--CSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 529 g~~~~~a~~~~i~~~~k~--~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
....+.+.+..+..+.+. ..++|||++|||.+++|+.+++..| ||+|||||+++..|+..
T Consensus 234 ~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~G--Ad~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 234 VAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAG--ADSVMIGNLFAGTKESP 295 (404)
T ss_dssp HHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHT--CSEEEECHHHHTBTTSS
T ss_pred cCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcC--CCHHhhCHHHhcCCCCC
Confidence 001233345555555432 2489999999999999999999998 99999999999998764
No 54
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=99.34 E-value=2.8e-13 Score=112.58 Aligned_cols=64 Identities=30% Similarity=0.647 Sum_probs=28.3
Q ss_pred CcccCCcccccCCCCCCCCCCCCCCCcCChhHHhh--cCCCCCCCCCcceeccccCCCCCccccCcccc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGEKCKFVHDKNVFMK--SKPEDISEQCYVFLQHGYCPMGIACRFGSSHL 138 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~yl~--~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~h~ 138 (611)
-+..||+.|+.. +.|+||++|+|+||+.+++. .+|...+..|+.|...|.||||.+|||+.++.
T Consensus 10 ~kt~~C~~f~~~---G~C~~G~~C~f~H~~~e~~~~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 10 YKTELCRTYSES---GRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp CCSCCCSGGGGT---SCCTTTTTCSSCSSSCCGGGTC--------------------------------
T ss_pred ccchhCHHhhhC---CCcCCCCCccCCCCChhhccccccccccCCcccchhhCcCCCCcCcCCCCCCCC
Confidence 468999999865 57999999999999999987 34556678999999999999999999987663
No 55
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.34 E-value=8.2e-11 Score=125.43 Aligned_cols=228 Identities=14% Similarity=0.118 Sum_probs=140.2
Q ss_pred cCcEEeccCCC-CCCHHHHHHHHHcCC-CEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChh-----hHHH
Q psy9514 258 QGKLYLSPLTT-VGNLPFRRLCKKWGA-DITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPY-----VLTK 330 (611)
Q Consensus 258 ~nrivlAPMt~-~gnlpfRrl~~~~Ga-~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~-----~~~~ 330 (611)
+.+++.|||.+ +++..+...+.+.|+ +++.++|.....+.. +...++.. .+.+|+|+++...+. ....
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~----~i~~~~~~-~~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQ----EIKRLRGL-TGRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHH----HHHHHHHH-CCSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHH----HHHHHHHh-CCCCeEEEEecCCCCcccHHHHHH
Confidence 77899999995 999999998888875 888777765543321 11222221 246899999876442 2222
Q ss_pred HHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccce
Q psy9514 331 CTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFI 410 (611)
Q Consensus 331 ~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v 410 (611)
.++.+.+.... .|.+.+. ..... ...+.+.++.+. ..|+|.|.+|++||.
T Consensus 85 ~~~~l~~~~~~------~g~~~~~-------------------~~~~~-~~~~~~~~~~~~-~~g~~~V~~~~g~~~--- 134 (369)
T 3bw2_A 85 YAHQLAGEAAW------YETELGD-------------------PDGGR-DDGYDAKLAVLL-DDPVPVVSFHFGVPD--- 134 (369)
T ss_dssp HHHHTHHHHHH------TTCCCCC-------------------SCSCS-STTHHHHHHHHH-HSCCSEEEEESSCCC---
T ss_pred HHHHHHHHHHH------cCCCcCc-------------------ccccc-cccHHHHHHHHH-hcCCCEEEEeCCCCc---
Confidence 23333221100 0111100 00000 011222333332 359999999999982
Q ss_pred eccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhH
Q psy9514 411 YKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDY 490 (611)
Q Consensus 411 ~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~ 490 (611)
.++++.+++ .++++.+++. +.+.++.+++.|+|+|.++|+..... +
T Consensus 135 ----------------~~~i~~~~~-~g~~v~~~v~---------t~~~a~~a~~~GaD~i~v~g~~~GGh-~------- 180 (369)
T 3bw2_A 135 ----------------REVIARLRR-AGTLTLVTAT---------TPEEARAVEAAGADAVIAQGVEAGGH-Q------- 180 (369)
T ss_dssp ----------------HHHHHHHHH-TTCEEEEEES---------SHHHHHHHHHTTCSEEEEECTTCSEE-C-------
T ss_pred ----------------HHHHHHHHH-CCCeEEEECC---------CHHHHHHHHHcCCCEEEEeCCCcCCc-C-------
Confidence 345566655 3777777642 12457788899999999987642110 0
Q ss_pred HHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc-cC--CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHH
Q psy9514 491 IEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY-TK--QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTES 567 (611)
Q Consensus 491 i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~-~~--~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~ 567 (611)
|....... .. ...|..+.++.+. .++|||+.|||.+++++.++
T Consensus 181 ---------------------------------g~~~~~~~~~~~~~~~~~~l~~i~~~-~~iPViaaGGI~~~~~~~~~ 226 (369)
T 3bw2_A 181 ---------------------------------GTHRDSSEDDGAGIGLLSLLAQVREA-VDIPVVAAGGIMRGGQIAAV 226 (369)
T ss_dssp ---------------------------------CCSSCCGGGTTCCCCHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHH
T ss_pred ---------------------------------CCcccccccccccccHHHHHHHHHHh-cCceEEEECCCCCHHHHHHH
Confidence 00000000 01 2347888887665 48999999999999999999
Q ss_pred HHcCCCccEEEEcHHhhhCCchH
Q psy9514 568 LKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 568 l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
+..| +|+|+|||+++.+|++.
T Consensus 227 l~~G--Ad~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 227 LAAG--ADAAQLGTAFLATDESG 247 (369)
T ss_dssp HHTT--CSEEEESHHHHTSTTCC
T ss_pred HHcC--CCEEEEChHHhCCcccC
Confidence 9987 99999999999999874
No 56
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.28 E-value=1.1e-10 Score=124.09 Aligned_cols=132 Identities=17% Similarity=0.101 Sum_probs=92.1
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
+|+|.|.||.++. ++..+.++++.+++..++||.++.- .+.+.++.+.++|+|+|.+
T Consensus 116 aGad~I~ld~a~G---------------~~~~~~~~i~~i~~~~~~~Vivg~v--------~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 116 AGVDVIVLDSAHG---------------HSLNIIRTLKEIKSKMNIDVIVGNV--------VTEEATKELIENGADGIKV 172 (361)
T ss_dssp TTCSEEEECCSCC---------------SBHHHHHHHHHHHHHCCCEEEEEEE--------CSHHHHHHHHHTTCSEEEE
T ss_pred cCcCeEEEeCCCC---------------CcHHHHHHHHHHHHhcCCcEEEccC--------CCHHHHHHHHHcCcCEEEE
Confidence 4899999997652 3466778899998888889888532 1235678899999999998
Q ss_pred EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhh--CCCCc
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL--CSPAP 551 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~--~~~iP 551 (611)
........ .|+.....+.+.+..+.++.+. ..++|
T Consensus 173 G~~~Gs~~-------------------------------------------~tr~~~g~g~p~~~~i~~v~~~~~~~~iP 209 (361)
T 3khj_A 173 GIGPGSIC-------------------------------------------TTRIVAGVGVPQITAIEKCSSVASKFGIP 209 (361)
T ss_dssp CSSCCTTC-------------------------------------------CHHHHTCBCCCHHHHHHHHHHHHHHHTCC
T ss_pred ecCCCcCC-------------------------------------------CcccccCCCCCcHHHHHHHHHHHhhcCCe
Confidence 32211000 0000001223455555555322 13799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
||+.|||.+++|+.+++..| ||+||||++++.-++-..++
T Consensus 210 VIA~GGI~~~~di~kala~G--Ad~V~vGs~~~~t~Esp~~~ 249 (361)
T 3khj_A 210 IIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPGEK 249 (361)
T ss_dssp EEEESCCCSHHHHHHHHHHT--CSEEEESTTTTTBTTSSCEE
T ss_pred EEEECCCCCHHHHHHHHHcC--CCEEEEChhhhcCCcCCcch
Confidence 99999999999999999998 99999999999987755443
No 57
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.24 E-value=4.4e-11 Score=119.78 Aligned_cols=154 Identities=12% Similarity=0.216 Sum_probs=106.6
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEE---E-
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVK---T- 445 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVK---i- 445 (611)
++.+-.+-.+++++..+.+ +|+|+|= .|+.++.+|.++.++++.....+.+.+.++ +
T Consensus 77 pv~v~ggI~~~~~~~~~l~-----~Gad~V~--------------lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~ 137 (244)
T 1vzw_A 77 KVELSGGIRDDDTLAAALA-----TGCTRVN--------------LGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLR 137 (244)
T ss_dssp EEEEESSCCSHHHHHHHHH-----TTCSEEE--------------ECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEEC
T ss_pred cEEEECCcCCHHHHHHHHH-----cCCCEEE--------------ECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEE
Confidence 4444444456776555432 2555554 366778889989888887654333333332 1
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
+.||.+......++++.+++.|++.|.+|++.+...
T Consensus 138 ~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~-------------------------------------------- 173 (244)
T 1vzw_A 138 GRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGT-------------------------------------------- 173 (244)
T ss_dssp CSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------------------------------------------------
T ss_pred EcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccc--------------------------------------------
Confidence 234544333567788888888888888887764432
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHc---CCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKK---SPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~---G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.+ .+|+.+.++.+. .++|||++|||.+++++.++++. | ||+||+||+++.+||.|.++.+
T Consensus 174 -----~~g-~~~~~~~~i~~~-~~ipvia~GGI~~~~d~~~~~~~~~~G--adgv~vG~al~~~~~~~~~~~~ 237 (244)
T 1vzw_A 174 -----LQG-PNLELLKNVCAA-TDRPVVASGGVSSLDDLRAIAGLVPAG--VEGAIVGKALYAKAFTLEEALE 237 (244)
T ss_dssp -------C-CCHHHHHHHHHT-CSSCEEEESCCCSHHHHHHHHTTGGGT--EEEEEECHHHHTTSSCHHHHHH
T ss_pred -----cCC-CCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHhhccCC--CceeeeeHHHHcCCCCHHHHHH
Confidence 333 478888888765 48999999999999999999988 7 9999999999999999988765
No 58
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.23 E-value=2.9e-11 Score=135.58 Aligned_cols=175 Identities=12% Similarity=0.083 Sum_probs=112.0
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHh-hcCCCEEEEEEccccCCchHH-HHHHH--HHHHcCC-
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNE-VSSLPITVKTRTGIHKDNNII-HNFMP--KFRDWGA- 468 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~-~~~~PvtVKiR~g~~~~~~~a-~~la~--~l~~aGv- 468 (611)
+|+|.|-||.+| ..+..+-..++.++.+|+++.++.+.... .+ -+.+-+|.........+ +..++ .....|-
T Consensus 359 aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~i--vv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (555)
T 1jvn_A 359 SGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYGAQAV--VISVDPKRVYVNSQADTKNKVFETEYPGPNGEK 435 (555)
T ss_dssp HTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGE--EEEECEEEEEESSGGGCSSCCEECSSCCTTCCC
T ss_pred cCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhCCCcE--EEEEEccccccccccccccccccccccCCCCCc
Confidence 499999999998 22222233455678899999999998742 21 12222221100000000 00000 0000010
Q ss_pred ---CEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHh
Q psy9514 469 ---SLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQ 545 (611)
Q Consensus 469 ---d~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k 545 (611)
-.++++|+.... .....+++..+.+.|++.|++|+++++|.+.+ .+|+.++++.+
T Consensus 436 ~~~~~v~~~Gw~~~~---------------------~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~ 493 (555)
T 1jvn_A 436 YCWYQCTIKGGRESR---------------------DLGVWELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKD 493 (555)
T ss_dssp EEEEEEEETTTTEEE---------------------EEEHHHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHH
T ss_pred ceeEEEEEecCccCC---------------------CCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHH
Confidence 024455543211 11233456667777778888888888887776 59999999877
Q ss_pred hCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 546 LCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 546 ~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
. +++|||++|||.|++|+.++++.+ ++|+||+||+++.+||.|.++++
T Consensus 494 ~-~~iPVIasGGi~s~~d~~~~~~~~-G~~gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 494 A-VKIPVIASSGAGVPEHFEEAFLKT-RADACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp H-CSSCEEECSCCCSHHHHHHHHHHS-CCSEEEESHHHHTTSCCHHHHHH
T ss_pred h-CCccEEEECCCCCHHHHHHHHHhc-CChHHHHHHHHHcCCCCHHHHHH
Confidence 5 599999999999999999999843 49999999999999999999875
No 59
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.21 E-value=3.4e-12 Score=128.40 Aligned_cols=154 Identities=14% Similarity=0.186 Sum_probs=29.2
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHH-hhc--CCC------
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMN-EVS--SLP------ 440 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~-~~~--~~P------ 440 (611)
|+++.-+-.+++++.++.+ .|+|+| ..|+.++.+|.++.++.+.+. ..+ +++
T Consensus 81 pvi~~Ggi~~~~~~~~~l~-----~Gad~V--------------~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~ 141 (247)
T 3tdn_A 81 PIIASGGAGKMEHFLEAFL-----RGADKV--------------SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 141 (247)
T ss_dssp CEEEESCCCSHHHHHHHHH-----TTCSEE--------------CCSHHHHHCTHHHHHHHHHHC---------------
T ss_pred CEEEeCCCCCHHHHHHHHH-----cCCCee--------------ehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 3444333447777666532 245554 357888899999988888773 211 222
Q ss_pred -EEEEEEccccCC-chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCc
Q psy9514 441 -ITVKTRTGIHKD-NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGAS 518 (611)
Q Consensus 441 -vtVKiR~g~~~~-~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~ 518 (611)
..|+++ |+.+. ...+.++++.+++.|++.|.+|.+.+.
T Consensus 142 ~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~--------------------------------------- 181 (247)
T 3tdn_A 142 EFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD--------------------------------------- 181 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCC---------------------------------------
Confidence 134443 33322 123456667777777777777665433
Q ss_pred eEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 519 LITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 519 ~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
+.+.+ .+++.++++.+. .++|||++|||.|++|+.++++.| +|+|||||+++.+||+|+++++.
T Consensus 182 ----------g~~~g-~~~~~~~~i~~~-~~iPvia~GGI~~~~d~~~~~~~G--ad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 182 ----------GTKSG-YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRG--ADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred ----------CCcCC-CCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHHcC--CcHhhccHHHHcCcHHHHHHHHh
Confidence 22333 467777777654 589999999999999999999997 99999999999999999998764
No 60
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.19 E-value=3.6e-10 Score=119.88 Aligned_cols=201 Identities=14% Similarity=0.043 Sum_probs=129.1
Q ss_pred cccCeeecCcEEeccCCCCCCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHH
Q psy9514 251 EKKKIDWQGKLYLSPLTTVGNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTK 330 (611)
Q Consensus 251 ei~~l~l~nrivlAPMt~~gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~ 330 (611)
+++++.|+-++++|||.++++..+.+.+.+.|.-.+++.+... +.+..
T Consensus 35 ~l~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~--------------------------------ee~~~ 82 (361)
T 3r2g_A 35 RLGKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTI--------------------------------EENIQ 82 (361)
T ss_dssp TTSSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCH--------------------------------HHHHH
T ss_pred EECCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCH--------------------------------HHHHH
Confidence 4578899999999999999999999999888854444433111 11111
Q ss_pred HHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccce
Q psy9514 331 CTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFI 410 (611)
Q Consensus 331 ~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v 410 (611)
. +.+.. .++ .+.+ ..+....+.++++. .+|+|.|+|+.++..
T Consensus 83 ~---i~~~~--~~~---------------------------~~~~--g~~~~~~e~~~~a~-~aGvdvI~id~a~G~--- 124 (361)
T 3r2g_A 83 E---FKKCK--GPV---------------------------FVSV--GCTENELQRAEALR-DAGADFFCVDVAHAH--- 124 (361)
T ss_dssp H---HHTCC--SCC---------------------------BEEE--CSSHHHHHHHHHHH-HTTCCEEEEECSCCS---
T ss_pred H---Hhhcc--eEE---------------------------EEEc--CCCHHHHHHHHHHH-HcCCCEEEEeCCCCC---
Confidence 1 11000 000 0000 11233344455543 359999999876641
Q ss_pred eccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChh
Q psy9514 411 YKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD 489 (611)
Q Consensus 411 ~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~ 489 (611)
+..+.++|+.+++.. ++||.++--. +.+.++.+.++|+|+|.|......+. .
T Consensus 125 ------------~~~~~e~I~~ir~~~~~~~Vi~G~V~--------T~e~A~~a~~aGaD~I~Vg~g~G~~~-------~ 177 (361)
T 3r2g_A 125 ------------AKYVGKTLKSLRQLLGSRCIMAGNVA--------TYAGADYLASCGADIIKAGIGGGSVC-------S 177 (361)
T ss_dssp ------------SHHHHHHHHHHHHHHTTCEEEEEEEC--------SHHHHHHHHHTTCSEEEECCSSSSCH-------H
T ss_pred ------------cHhHHHHHHHHHHhcCCCeEEEcCcC--------CHHHHHHHHHcCCCEEEEcCCCCcCc-------c
Confidence 235678899999887 7899886221 23557889999999999832211000 0
Q ss_pred HHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHH
Q psy9514 490 YIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLK 569 (611)
Q Consensus 490 ~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~ 569 (611)
|+.....+.+.+..|.++++.. . |||+.|||.++.|+.+++.
T Consensus 178 ------------------------------------tr~~~g~g~p~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa 219 (361)
T 3r2g_A 178 ------------------------------------TRIKTGFGVPMLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALA 219 (361)
T ss_dssp ------------------------------------HHHHHCCCCCHHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHH
T ss_pred ------------------------------------ccccCCccHHHHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHH
Confidence 0000012234667777776543 3 9999999999999999999
Q ss_pred cCCCccEEEEcHHhhhCCc
Q psy9514 570 KSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 570 ~G~~aD~VmIGRgaL~dP~ 588 (611)
.| ||+|||||.++.-.+
T Consensus 220 ~G--Ad~V~iGr~f~~t~E 236 (361)
T 3r2g_A 220 FG--ADFVMIGGMLAGSAP 236 (361)
T ss_dssp TT--CSEEEESGGGTTBTT
T ss_pred cC--CCEEEEChHHhCCcc
Confidence 97 999999999998764
No 61
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.17 E-value=6.6e-10 Score=111.05 Aligned_cols=177 Identities=13% Similarity=0.085 Sum_probs=118.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC---CchH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK---DNNI 455 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~---~~~~ 455 (611)
++..+.+.|+... ..|..+|.++ . .+.++.+++.+++||...+|....+ -...
T Consensus 34 ~~~~~~~~A~a~~-~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~ 89 (229)
T 3q58_A 34 KPEIVAAMAQAAA-SAGAVAVRIE-------------------G----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITP 89 (229)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEE-------------------S----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC
T ss_pred CcchHHHHHHHHH-HCCCcEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCc
Confidence 3566666666654 3578887762 1 3557889999999987655542211 1112
Q ss_pred HHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch------hhhhcchhhHhcCCceE--Eeccccc
Q psy9514 456 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN------IIHNFMPKFRDWGASLI--TLHGRTR 527 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~------~~~~~~~~l~~~G~~~i--tihgrtr 527 (611)
..+-+..+.++|+|.|.+....+.. + ..+.++...+++... ...+.+..+.+.|++.| +++|+|.
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~----p---~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~ 162 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSR----P---VDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTG 162 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCC----S---SCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCC----h---HHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCC
Confidence 2344667889999999887654211 1 112222222222111 13345667888999999 4678877
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHH
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~e 592 (611)
.+ ....++|+.+.++.+. ++|||++|||.|++|+.++++.| +|+|||| .+|.+||.+.+
T Consensus 163 ~~-~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~G--adgV~VG-sai~~p~~~~~ 221 (229)
T 3q58_A 163 PI-TPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHG--AWAVTVG-SAITRIEHICQ 221 (229)
T ss_dssp SC-CCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTT--CSEEEEC-HHHHCHHHHHH
T ss_pred CC-cCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcC--CCEEEEc-hHhcChHHHHH
Confidence 54 3456789999998764 89999999999999999999987 9999999 55668986554
No 62
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.15 E-value=1.1e-09 Score=115.64 Aligned_cols=237 Identities=15% Similarity=0.108 Sum_probs=139.9
Q ss_pred cccccCeeecCcEEeccCCCC------CCHHHHHHHHHcCCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEecC
Q psy9514 249 NSEKKKIDWQGKLYLSPLTTV------GNLPFRRLCKKWGADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQLCG 322 (611)
Q Consensus 249 p~ei~~l~l~nrivlAPMt~~------gnlpfRrl~~~~Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g 322 (611)
..++-+.++.-++++||+... |.+..=+-|.+.|.-.+++-+.... +- + +..+..+.++..||.-
T Consensus 60 ~t~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~s-~e-----~---v~~~~~~~~~wfQlY~ 130 (352)
T 3sgz_A 60 RTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYS-LE-----D---IVAAAPEGFRWFQLYM 130 (352)
T ss_dssp CEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSSC-HH-----H---HHHHSTTCEEEEECCC
T ss_pred ceEECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCCC-HH-----H---HHHhccCccceecccc
Confidence 356778889999999998753 3466677788889988887765432 11 1 1112224577889864
Q ss_pred CC-hhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHH---HHHHhcccce
Q psy9514 323 NN-PYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQ---LLEEQMVVDF 398 (611)
Q Consensus 323 ~~-p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~---~l~~~~g~D~ 398 (611)
.. .+......+..+. .++..+-+..-.|+. |.-..+...-.. .+. ...+
T Consensus 131 ~~d~~~~~~l~~ra~~-aG~~alvlTvD~p~~-----------------------g~R~~d~r~~~~~p~~~~-~~~~-- 183 (352)
T 3sgz_A 131 KSDWDFNKQMVQRAEA-LGFKALVITIDTPVL-----------------------GNRRRDKRNQLNLEANIL-KAAL-- 183 (352)
T ss_dssp CSCHHHHHHHHHHHHH-TTCCCEEEECSCSSC-----------------------CCCHHHHHHHHHSCHHHH-TTCC--
T ss_pred CCCHHHHHHHHHHHHH-cCCCEEEEEeCCCCC-----------------------CcchhhhhcCCCCCcccc-hhhh--
Confidence 43 3333333333333 233333222222221 111111000000 000 0000
Q ss_pred EEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccc
Q psy9514 399 VDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTR 478 (611)
Q Consensus 399 IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r 478 (611)
.-+.......+... -.-+|.+.-+.|+.+++.++.||+||..+. .+.++.+.++|+|+|.|+++..
T Consensus 184 -----~~~~~~~~~~~~~~-~~~d~~~~w~~i~~lr~~~~~PvivK~v~~--------~e~A~~a~~~GaD~I~vsn~GG 249 (352)
T 3sgz_A 184 -----RALKEEKPTQSVPV-LFPKASFCWNDLSLLQSITRLPIILKGILT--------KEDAELAMKHNVQGIVVSNHGG 249 (352)
T ss_dssp ---------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECS--------HHHHHHHHHTTCSEEEECCGGG
T ss_pred -----cccccccccchhhh-hccCCCCCHHHHHHHHHhcCCCEEEEecCc--------HHHHHHHHHcCCCEEEEeCCCC
Confidence 00000000000111 223667777889999999999999997732 3568889999999999977543
Q ss_pred ccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecC
Q psy9514 479 EQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGD 557 (611)
Q Consensus 479 ~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGg 557 (611)
-|. ..+++.++.+.++.+... ++|||++||
T Consensus 250 ~~~-------------------------------------------------d~~~~~~~~L~~i~~av~~~ipVia~GG 280 (352)
T 3sgz_A 250 RQL-------------------------------------------------DEVSASIDALREVVAAVKGKIEVYMDGG 280 (352)
T ss_dssp TSS-------------------------------------------------CSSCCHHHHHHHHHHHHTTSSEEEEESS
T ss_pred Ccc-------------------------------------------------CCCccHHHHHHHHHHHhCCCCeEEEECC
Confidence 222 234567777777766542 799999999
Q ss_pred CCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 558 ILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 558 I~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
|.+.+|+.+++..| ||+|||||++|..
T Consensus 281 I~~g~Dv~kaLalG--A~aV~iGr~~l~~ 307 (352)
T 3sgz_A 281 VRTGTDVLKALALG--ARCIFLGRPILWG 307 (352)
T ss_dssp CCSHHHHHHHHHTT--CSEEEESHHHHHH
T ss_pred CCCHHHHHHHHHcC--CCEEEECHHHHHH
Confidence 99999999999987 9999999998864
No 63
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.11 E-value=4.4e-10 Score=112.81 Aligned_cols=152 Identities=14% Similarity=0.090 Sum_probs=104.3
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHh-h--cCCCE------
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNE-V--SSLPI------ 441 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~-~--~~~Pv------ 441 (611)
+++.-+-++++++.++.+. |+|+|= .|..++.+|..+.++++.... . +++++
T Consensus 78 vi~~Ggi~~~~~~~~~~~~-----Gad~V~--------------lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~ 138 (252)
T 1ka9_F 78 LTVGGGVRSLEDARKLLLS-----GADKVS--------------VNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDF 138 (252)
T ss_dssp EEEESSCCSHHHHHHHHHH-----TCSEEE--------------ECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTE
T ss_pred EEEECCcCCHHHHHHHHHc-----CCCEEE--------------EChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCC
Confidence 3333333456666665433 566553 367788899988888887742 1 22222
Q ss_pred -EEEEEccccCC-chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCce
Q psy9514 442 -TVKTRTGIHKD-NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASL 519 (611)
Q Consensus 442 -tVKiR~g~~~~-~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 519 (611)
.|+++ |+.+. .....++++.+++.|++.|.+|++.+...
T Consensus 139 ~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~-------------------------------------- 179 (252)
T 1ka9_F 139 PEVHVA-GGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGT-------------------------------------- 179 (252)
T ss_dssp EEEEET-TTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTT--------------------------------------
T ss_pred EEEEEC-CCccccCCcHHHHHHHHHHcCCCEEEEecccCCCC--------------------------------------
Confidence 23331 33221 12456777777788888877776554322
Q ss_pred EEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 520 ITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 520 itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.+ .+|+.++++.+. .++|||++|||.+++|+.++++.| +|+||||++++..||.+.++++
T Consensus 180 -----------~~g-~~~~~i~~l~~~-~~ipvia~GGI~~~~d~~~~~~~G--adgv~vgsal~~~~~~~~~~~~ 240 (252)
T 1ka9_F 180 -----------KEG-YDLRLTRMVAEA-VGVPVIASGGAGRMEHFLEAFQAG--AEAALAASVFHFGEIPIPKLKR 240 (252)
T ss_dssp -----------CSC-CCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTSSCHHHHHH
T ss_pred -----------cCC-CCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHCC--CHHHHHHHHHHcCCCCHHHHHH
Confidence 333 378888888765 489999999999999999999866 9999999999999998888764
No 64
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.11 E-value=1.9e-09 Score=107.89 Aligned_cols=176 Identities=15% Similarity=0.145 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC---CchHH
Q psy9514 380 PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK---DNNII 456 (611)
Q Consensus 380 p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~---~~~~a 456 (611)
+..+.+.|+... ..|..+|.++ . .+.++.+++.+++||...+|....+ -....
T Consensus 35 ~~~~~~~A~a~~-~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~ 90 (232)
T 3igs_A 35 PEIVAAMALAAE-QAGAVAVRIE-------------------G----IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPF 90 (232)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEE-------------------S----HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCS
T ss_pred cchHHHHHHHHH-HCCCeEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCcceEeCcc
Confidence 566667666664 3477777752 1 3567889999999985444432111 01112
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch------hhhhcchhhHhcCCceE--Eecccccc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN------IIHNFMPKFRDWGASLI--TLHGRTRE 528 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~------~~~~~~~~l~~~G~~~i--tihgrtr~ 528 (611)
.+-+..+.++|+|.|.+....+.. + ..+.++...+++... ...+.+..+.+.|++.| +++|+|..
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~----p---~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~ 163 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQR----P---VAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTP 163 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCC----S---SCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSS
T ss_pred HHHHHHHHHcCCCEEEECccccCC----H---HHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCC
Confidence 334667889999999887653210 1 112222222222111 13345667888999999 46787775
Q ss_pred ccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHH
Q psy9514 529 QRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 529 g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~e 592 (611)
+. ...++|+.+.++.+. ++|||++|||.|++|+.++++.| +|+|+||. +|.+||...+
T Consensus 164 ~~-~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGs-al~~p~~~~~ 221 (232)
T 3igs_A 164 DT-PEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYG--AWAVTVGS-AITRLEHICG 221 (232)
T ss_dssp SC-CSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTT--CSEEEECH-HHHCHHHHHH
T ss_pred CC-CCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcC--CCEEEEeh-HhcCHHHHHH
Confidence 53 355789999998764 89999999999999999999997 99999995 5557875443
No 65
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.08 E-value=8.4e-10 Score=114.66 Aligned_cols=173 Identities=17% Similarity=0.190 Sum_probs=107.7
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|+++|.+.. |.+...+...|+.++.+++.+.+| ++.+++||.+|+|++. ...++.+.++|++.|..
T Consensus 40 ~Ga~~I~~l~--p~~~~~~~~~G~~~~~~~~~i~~I----~~~~~iPv~~k~r~g~-------~~~~~~~~a~GAd~V~~ 106 (305)
T 2nv1_A 40 AGAVAVMALE--RVPADIRAAGGVARMADPTIVEEV----MNAVSIPVMAKARIGH-------IVEARVLEAMGVDYIDE 106 (305)
T ss_dssp TTCSEEEECC--C-------CCCCCCCCCHHHHHHH----HHHCSSCEEEEECTTC-------HHHHHHHHHHTCSEEEE
T ss_pred cCCCEEEEcC--CCcchhhhccCcccCCCHHHHHHH----HHhCCCCEEecccccc-------hHHHHHHHHCCCCEEEE
Confidence 4999994432 544445555677788888776655 4456899999999874 24466777899999963
Q ss_pred EccccccccccCcChhHHHHHhhhcc--cCc-------hhhhhcchhhHhcCCceEEecc--------------cc----
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCS--RDN-------NIIHNFMPKFRDWGASLITLHG--------------RT---- 526 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~--~~~-------~~~~~~~~~l~~~G~~~itihg--------------rt---- 526 (611)
...... .++. .+++ ... ....+.... .+.|++.|.++| ||
T Consensus 107 ~~~l~~------~~~~------~~i~~~~~g~~v~~~~~~~~e~~~a-~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~ 173 (305)
T 2nv1_A 107 SEVLTP------ADEE------FHLNKNEYTVPFVCGCRDLGEATRR-IAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQ 173 (305)
T ss_dssp CTTSCC------SCSS------CCCCGGGCSSCEEEEESSHHHHHHH-HHTTCSEEEECCCTTSCCTHHHHHHHHHHHHH
T ss_pred eccCCH------HHHH------HHHHHhccCCcEEEEeCCHHHHHHH-HHCCCCEEEeccccCccchHHHHhhhhhhhcc
Confidence 222110 0100 0000 000 001122223 367999998843 22
Q ss_pred --------cccccc----CCccHHHHHHHHhhCCCCcEE--EecCCCCHHHHHHHHHcCCCccEEEEcHHhhh--CCc-h
Q psy9514 527 --------REQRYT----KQADWDYIEKCAQLCSPAPLY--GNGDILSYEDYTESLKKSPSISGVMIGRGALI--KPW-I 589 (611)
Q Consensus 527 --------r~g~~~----~~a~~~~i~~~~k~~~~iPVI--gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~--dP~-l 589 (611)
+.+.++ .+.+++++.++.+. .++||+ ++|||.|++|+.+++..| +|+|+|||+++. ||+ .
T Consensus 174 i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~a~GGI~~~~d~~~~~~~G--adgV~vGsai~~~~~p~~~ 250 (305)
T 2nv1_A 174 VRKVVAMSEDELMTEAKNLGAPYELLLQIKKD-GKLPVVNFAAGGVATPADAALMMQLG--ADGVFVGSGIFKSDNPAKF 250 (305)
T ss_dssp HHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHH-TSCSSCEEBCSCCCSHHHHHHHHHTT--CSCEEECGGGGGSSCHHHH
T ss_pred chhhccccchhhhcccccccccHHHHHHHHHh-cCCCEEEEeccCCCCHHHHHHHHHcC--CCEEEEcHHHHcCCCHHHH
Confidence 333222 45678888888765 589998 999999999999999987 999999999996 454 3
Q ss_pred HHHHHc
Q psy9514 590 FQEIKE 595 (611)
Q Consensus 590 f~ei~~ 595 (611)
..++.+
T Consensus 251 ~~~l~~ 256 (305)
T 2nv1_A 251 AKAIVE 256 (305)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 66
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.08 E-value=9.5e-10 Score=109.45 Aligned_cols=153 Identities=14% Similarity=0.094 Sum_probs=108.2
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHh--h-c--CC-----C
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNE--V-S--SL-----P 440 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~--~-~--~~-----P 440 (611)
+++...-.+++.+.++.+ +|+|+|.|+ ..++.+|..+.++++.... . + +. +
T Consensus 80 vi~~g~i~~~~~~~~~~~-----~Gad~V~i~--------------~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~ 140 (253)
T 1h5y_A 80 VLVGGGVRSLEDATTLFR-----AGADKVSVN--------------TAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEY 140 (253)
T ss_dssp EEEESSCCSHHHHHHHHH-----HTCSEEEES--------------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSS
T ss_pred EEEECCCCCHHHHHHHHH-----cCCCEEEEC--------------hHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCc
Confidence 333334446666544433 389998887 2456778888888777542 1 1 22 2
Q ss_pred EEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceE
Q psy9514 441 ITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLI 520 (611)
Q Consensus 441 vtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~i 520 (611)
+.|++|.+..+......++++.+.+.|++.|.++++.+...
T Consensus 141 ~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~--------------------------------------- 181 (253)
T 1h5y_A 141 YEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGT--------------------------------------- 181 (253)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTT---------------------------------------
T ss_pred EEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCC---------------------------------------
Confidence 57777765543334567788889999999999988764321
Q ss_pred EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 521 TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 521 tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
.. ..+++.++++.+. .++||+++|||.+++++.++++.| +|+||+|++++..++-+.++.+
T Consensus 182 ----------~~-~~~~~~i~~l~~~-~~~pvia~GGi~~~~~~~~~~~~G--a~~v~vgsal~~~~~~~~~~~~ 242 (253)
T 1h5y_A 182 ----------GL-GYDVELIRRVADS-VRIPVIASGGAGRVEHFYEAAAAG--ADAVLAASLFHFRVLSIAQVKR 242 (253)
T ss_dssp ----------CS-CCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTSSCHHHHHH
T ss_pred ----------cC-cCCHHHHHHHHHh-cCCCEEEeCCCCCHHHHHHHHHcC--CcHHHHHHHHHcCCCCHHHHHH
Confidence 11 2367888887765 489999999999999999999876 9999999999999876666544
No 67
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.08 E-value=6.7e-10 Score=111.56 Aligned_cols=152 Identities=15% Similarity=0.182 Sum_probs=103.0
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHh-hcCCCE--------
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNE-VSSLPI-------- 441 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~-~~~~Pv-------- 441 (611)
+++--+-.+++++..+.+ .|+|+|=| |+.++.+|..+.++++.+.. .+.+.+
T Consensus 77 vi~~ggI~~~~~~~~~~~-----~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~ 137 (253)
T 1thf_D 77 FTVGGGIHDFETASELIL-----RGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGE 137 (253)
T ss_dssp EEEESSCCSHHHHHHHHH-----TTCSEEEE--------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTE
T ss_pred EEEeCCCCCHHHHHHHHH-----cCCCEEEE--------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCc
Confidence 333333346666555532 26666533 67778889988888887742 221222
Q ss_pred -EEEEEccccCC-chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCce
Q psy9514 442 -TVKTRTGIHKD-NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASL 519 (611)
Q Consensus 442 -tVKiR~g~~~~-~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 519 (611)
.|+++ |+.+. .....++++.+++.|++.|.+|.+.+...
T Consensus 138 ~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~-------------------------------------- 178 (253)
T 1thf_D 138 FMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT-------------------------------------- 178 (253)
T ss_dssp EEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTS--------------------------------------
T ss_pred EEEEEC-CCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCC--------------------------------------
Confidence 33332 33221 12356777777788888887776654322
Q ss_pred EEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 520 ITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 520 itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.+ .+|+.++++.+. .++|||++|||.+++|+.++++.| +|+||+|++++..||.+.++.+
T Consensus 179 -----------~~g-~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~G--adgv~vGsal~~~~~~~~~~~~ 239 (253)
T 1thf_D 179 -----------KSG-YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFREIDVRELKE 239 (253)
T ss_dssp -----------CSC-CCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTCSCHHHHHH
T ss_pred -----------CCC-CCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcC--ChHHHHHHHHHcCCCCHHHHHH
Confidence 333 478888887665 489999999999999999999876 9999999999999987777653
No 68
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.06 E-value=3.1e-09 Score=104.70 Aligned_cols=196 Identities=11% Similarity=0.136 Sum_probs=126.6
Q ss_pred ccceeeecccC----chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEE
Q psy9514 368 ANLFGVQLCGN----NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITV 443 (611)
Q Consensus 368 ~~~~ivQi~g~----~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtV 443 (611)
...+.+|..++ +++...+.|+.+. ..|+++|.++ . .+.++.+++.++.|+..
T Consensus 6 ~~~~~~q~~~~~p~~~~~~~~~~a~~~~-~~Ga~~i~~~-------------------~----~~~i~~i~~~~~~pv~~ 61 (223)
T 1y0e_A 6 GLIVSCQALPDEPLHSSFIMSKMALAAY-EGGAVGIRAN-------------------T----KEDILAIKETVDLPVIG 61 (223)
T ss_dssp EEEEECCCCTTSTTCCHHHHHHHHHHHH-HHTCSEEEEE-------------------S----HHHHHHHHHHCCSCEEE
T ss_pred CeEEEecCCCCCCCCCCccHHHHHHHHH-HCCCeeeccC-------------------C----HHHHHHHHHhcCCCEEe
Confidence 44567888888 6677888887775 3488888663 1 25578888888999843
Q ss_pred EEEccccC---CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC----chhhhhcchhhHhcC
Q psy9514 444 KTRTGIHK---DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD----NNIIHNFMPKFRDWG 516 (611)
Q Consensus 444 KiR~g~~~---~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~----~~~~~~~~~~l~~~G 516 (611)
.++....+ -.....+.+..+.++|++.|++|....... . ..-.+.+..+.+..+.. .....+.+..+.+.|
T Consensus 62 ~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p-~-~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G 139 (223)
T 1y0e_A 62 IVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRP-K-ETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLG 139 (223)
T ss_dssp ECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCS-S-SCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT
T ss_pred eeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCc-c-cCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcC
Confidence 33321111 001123446667889999999997542110 0 01134455555443211 011122345678899
Q ss_pred CceEEe--cccccccccc--CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHH
Q psy9514 517 ASLITL--HGRTREQRYT--KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 517 ~~~iti--hgrtr~g~~~--~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~e 592 (611)
++.|.+ +|+|...... ...+++.++++.+.. ++|||+.|||.|++++.++++.| +|+|++||+++ +|++..+
T Consensus 140 ~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~G--ad~v~vG~al~-~p~~~~~ 215 (223)
T 1y0e_A 140 FDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIAEGNVITPDMYKRVMDLG--VHCSVVGGAIT-RPKEITK 215 (223)
T ss_dssp CSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHH-CHHHHHH
T ss_pred CCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEEecCCCCHHHHHHHHHcC--CCEEEEChHHc-CcHHHHH
Confidence 999965 5565433222 345788888887764 89999999999999999999987 99999999865 4876655
Q ss_pred H
Q psy9514 593 I 593 (611)
Q Consensus 593 i 593 (611)
.
T Consensus 216 ~ 216 (223)
T 1y0e_A 216 R 216 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.04 E-value=6e-10 Score=111.47 Aligned_cols=127 Identities=18% Similarity=0.256 Sum_probs=90.5
Q ss_pred cccccccChHHHHHHHHHHHhhc--CCCE---EEEEEccccCCch-HHHHHHHHHHHcCCCEEEEEccccccccccCcCh
Q psy9514 415 SGSGLLQRANILQSVITCMNEVS--SLPI---TVKTRTGIHKDNN-IIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 488 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~--~~Pv---tVKiR~g~~~~~~-~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw 488 (611)
.|+.++.+|.++.++ +.....+ ++++ .|++ .||.+... ...++++.+++.|++.|.+|++.+.+.
T Consensus 101 lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~-~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~------- 171 (241)
T 1qo2_A 101 VSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF-KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGT------- 171 (241)
T ss_dssp ECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC-TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHH-------
T ss_pred ECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE-CCceecCCCCHHHHHHHHHhCCCCEEEEEeeccccc-------
Confidence 477888899888777 6553211 1222 2222 23433221 456777777788888887777664432
Q ss_pred hHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHH
Q psy9514 489 DYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESL 568 (611)
Q Consensus 489 ~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l 568 (611)
+.+ .+|+.++++.+.. ++|||++|||.+++|+.+++
T Consensus 172 ------------------------------------------~~g-~~~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~ 207 (241)
T 1qo2_A 172 ------------------------------------------LQE-HDFSLTKKIAIEA-EVKVLAAGGISSENSLKTAQ 207 (241)
T ss_dssp ------------------------------------------TCC-CCHHHHHHHHHHH-TCEEEEESSCCSHHHHHHHH
T ss_pred ------------------------------------------CCc-CCHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHH
Confidence 443 4788888887654 89999999999999999999
Q ss_pred Hc-----CCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 569 KK-----SPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 569 ~~-----G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+. | .||+||||++++..+.-+.++++
T Consensus 208 ~~~~~~~G-~adgv~vgsal~~~~~~~~~~~~ 238 (241)
T 1qo2_A 208 KVHTETNG-LLKGVIVGRAFLEGILTVEVMKR 238 (241)
T ss_dssp HHHHHTTT-SEEEEEECHHHHTTSSCHHHHHH
T ss_pred hcccccCC-eEeEEEeeHHHHcCCCCHHHHHH
Confidence 87 4 39999999999999998887754
No 70
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.02 E-value=8e-09 Score=109.92 Aligned_cols=129 Identities=15% Similarity=0.014 Sum_probs=87.9
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
+|+|.|.||.++- ++..+.++++.+++.. ++||.+..- .+.+.++.+.++|+|+|.
T Consensus 119 aGvd~I~idta~G---------------~~~~~~~~I~~ik~~~p~v~Vi~G~v--------~t~e~A~~a~~aGAD~I~ 175 (366)
T 4fo4_A 119 AGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGGNV--------ATAEGARALIEAGVSAVK 175 (366)
T ss_dssp TTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCEEEEEEE--------CSHHHHHHHHHHTCSEEE
T ss_pred CCCCEEEEeCCCC---------------CCHHHHHHHHHHHHhcCCCceEeeee--------CCHHHHHHHHHcCCCEEE
Confidence 4899999986432 2355677888888877 677776422 123567888999999999
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhh--CCCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL--CSPA 550 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~--~~~i 550 (611)
+........ .|+.....+.+.+..+.++++. ..++
T Consensus 176 vG~gpGs~~-------------------------------------------~tr~~~g~g~p~~~~l~~v~~~~~~~~i 212 (366)
T 4fo4_A 176 VGIGPGSIC-------------------------------------------TTRIVTGVGVPQITAIADAAGVANEYGI 212 (366)
T ss_dssp ECSSCSTTB-------------------------------------------CHHHHHCCCCCHHHHHHHHHHHHGGGTC
T ss_pred EecCCCCCC-------------------------------------------CcccccCcccchHHHHHHHHHHHhhcCC
Confidence 821110000 0000001233456666665542 2489
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 551 PLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 551 PVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
|||+.|||.++.|+.+++..| +|+||||+.++.-++-+
T Consensus 213 PVIA~GGI~~~~di~kala~G--Ad~V~vGs~f~~t~Esp 250 (366)
T 4fo4_A 213 PVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAP 250 (366)
T ss_dssp CEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSS
T ss_pred eEEEeCCCCCHHHHHHHHHcC--CCEEEEChHhhcCCCCC
Confidence 999999999999999999998 99999999999876543
No 71
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.00 E-value=9.9e-10 Score=111.22 Aligned_cols=153 Identities=14% Similarity=0.110 Sum_probs=89.2
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccc-c--ChHHHHHHHHHHH---hh--cCCCE
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLL-Q--RANILQSVITCMN---EV--SSLPI 441 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl-~--r~~~l~eIv~av~---~~--~~~Pv 441 (611)
|+++.-+-++++++.++.+. |+|+|=| |+.++ . ++..+.++++... .. +++++
T Consensus 76 Pvi~~ggi~~~~~i~~~~~~-----Gad~v~l--------------g~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~ 136 (266)
T 2w6r_A 76 PIIASGGAGKMEHFLEAFLA-----GADKALA--------------ASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDA 136 (266)
T ss_dssp CEEEESCCCSTHHHHHHHHH-----TCSEEEC--------------CCCC------CHHHHHHCC----CCCEEEEEEEE
T ss_pred CEEEECCCCCHHHHHHHHHc-----CCcHhhh--------------hHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEE
Confidence 44444444567776666432 5665544 55566 3 7778877776554 11 12222
Q ss_pred -------EEEEEccccCCc-hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhH
Q psy9514 442 -------TVKTRTGIHKDN-NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFR 513 (611)
Q Consensus 442 -------tVKiR~g~~~~~-~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~ 513 (611)
.|+++ |+.+.. ....++++.+++.|++.|.++++.+..
T Consensus 137 ~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g--------------------------------- 182 (266)
T 2w6r_A 137 KRVDGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDG--------------------------------- 182 (266)
T ss_dssp EEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTT---------------------------------
T ss_pred EecCCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEEEEeecCCC---------------------------------
Confidence 23332 222111 234567777777888877777655432
Q ss_pred hcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 514 DWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 514 ~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+.+ .+|+.++++.+. .++|||++|||.+++|+.++++.| ||+||||++++..||.+.++
T Consensus 183 ----------------~~~g-~~~~~i~~l~~~-~~ipvia~GGI~~~ed~~~~~~~G--adgv~vgsal~~~~~~~~~~ 242 (266)
T 2w6r_A 183 ----------------TKSG-YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFREIDMREL 242 (266)
T ss_dssp ----------------TCSC-CCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTC---------
T ss_pred ----------------CcCC-CCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHcC--CHHHHccHHHHcCCCCHHHH
Confidence 2333 478888887665 589999999999999999999877 99999999999999999887
Q ss_pred Hc
Q psy9514 594 KE 595 (611)
Q Consensus 594 ~~ 595 (611)
++
T Consensus 243 ~~ 244 (266)
T 2w6r_A 243 KE 244 (266)
T ss_dssp --
T ss_pred HH
Confidence 65
No 72
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.96 E-value=1.9e-09 Score=108.28 Aligned_cols=103 Identities=19% Similarity=0.299 Sum_probs=82.8
Q ss_pred EEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceE
Q psy9514 441 ITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLI 520 (611)
Q Consensus 441 vtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~i 520 (611)
+.|++|-+.........++++.+++.|++.|+++...+...
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~--------------------------------------- 62 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT--------------------------------------- 62 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTC---------------------------------------
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccC---------------------------------------
Confidence 56788855443334678999999999999999987653211
Q ss_pred EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 521 TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 521 tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
....+++.++++.+. .++|||++|+|.|+++++++++.| +|+|+|||++|.+|+++.++.+.
T Consensus 63 -----------~~~~~~~~i~~i~~~-~~ipvi~~Ggi~~~~~~~~~l~~G--ad~V~ig~~~l~dp~~~~~~~~~ 124 (247)
T 3tdn_A 63 -----------KSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLRG--ADKVSINTAAVENPSLITQIAQT 124 (247)
T ss_dssp -----------SSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHTT--CSEECCSHHHHHCTHHHHHHHHH
T ss_pred -----------CCcccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcC--CCeeehhhHHhhChHHHHHHHHH
Confidence 123567888887665 589999999999999999999987 99999999999999999988753
No 73
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.95 E-value=7.8e-09 Score=102.80 Aligned_cols=178 Identities=13% Similarity=0.134 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCC---chHHHH
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKD---NNIIHN 458 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~---~~~a~~ 458 (611)
.+.+.++.+. ..|+++|.++ .+ +.++.+++.+++||..-++-...+. .....+
T Consensus 37 ~~~~~a~~~~-~~G~~~i~~~-------------------~~----~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~ 92 (234)
T 1yxy_A 37 IMPLMAKAAQ-EAGAVGIRAN-------------------SV----RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMT 92 (234)
T ss_dssp SHHHHHHHHH-HHTCSEEEEE-------------------SH----HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHH
T ss_pred hHHHHHHHHH-HCCCcEeecC-------------------CH----HHHHHHHHhCCCCEEeeEcCCCCccccccCChHH
Confidence 5555555554 3488888775 12 4577888888999843333222110 112345
Q ss_pred HHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc----hhhhhcchhhHhcCCceE--Eecccccccccc
Q psy9514 459 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN----NIIHNFMPKFRDWGASLI--TLHGRTREQRYT 532 (611)
Q Consensus 459 la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~----~~~~~~~~~l~~~G~~~i--tihgrtr~g~~~ 532 (611)
.++.+.++|++.|++|....... ......+.|..+....+... ....+.+..+.+.|++.| +++|.+......
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~~-~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~ 171 (234)
T 1yxy_A 93 EVDQLAALNIAVIAMDCTKRDRH-DGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQE 171 (234)
T ss_dssp HHHHHHTTTCSEEEEECCSSCCT-TCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCS
T ss_pred HHHHHHHcCCCEEEEcccccCCC-CCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcCC
Confidence 67788899999999998653210 00011345555555442111 112233566778999999 788876532212
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
...++..++++.+. ++||++.|||+|++++.++++.| +|+|++|++++. |+.
T Consensus 172 ~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~G--ad~v~vGsal~~-p~~ 223 (234)
T 1yxy_A 172 AGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLG--VAGIVVGGAITR-PKE 223 (234)
T ss_dssp SSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTC--CSEEEECHHHHC-HHH
T ss_pred CCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCC--CCEEEEchHHhC-hHH
Confidence 45678889988765 89999999999999999999987 999999998887 753
No 74
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.93 E-value=4.6e-08 Score=105.09 Aligned_cols=128 Identities=17% Similarity=0.121 Sum_probs=89.4
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|+|.|.|+.++. .+..+.++|+.+++..++||.++.- .+.+.++.+.++|+|+|.+
T Consensus 155 aGvdvIvldta~G---------------~~~~~~e~I~~ik~~~~i~Vi~g~V--------~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 155 AGVDVIVLDSAHG---------------HSLNIIRTLKEIKSKMNIDVIVGNV--------VTEEATKELIENGADGIKV 211 (400)
T ss_dssp HTCSEEEECCSCC---------------SBHHHHHHHHHHHTTCCCEEEEEEE--------CSHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEeCCCC---------------CcccHHHHHHHHHhcCCCeEEEeec--------CCHHHHHHHHHcCCCEEEE
Confidence 4899999875532 2345678889998887888887522 1246678899999999998
Q ss_pred EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhC--CCCc
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC--SPAP 551 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~--~~iP 551 (611)
.... ... +.++.....+.+.+..+.++++.. .++|
T Consensus 212 G~g~-Gs~------------------------------------------~~tr~~~g~g~p~~~al~~v~~~~~~~~IP 248 (400)
T 3ffs_A 212 GIGP-GSI------------------------------------------CTTRIVAGVGVPQITAIEKCSSVASKFGIP 248 (400)
T ss_dssp CC----------------------------------------------------CCSCBCCCHHHHHHHHHHHHTTTTCC
T ss_pred eCCC-CcC------------------------------------------cccccccccchhHHHHHHHHHHHHHhcCCC
Confidence 3211 000 001111123345667777766432 4799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
||+.|||.+.+|+.+++..| ||+||||+.++.-++-
T Consensus 249 VIA~GGI~~~~di~kalalG--Ad~V~vGt~f~~t~Es 284 (400)
T 3ffs_A 249 IIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEES 284 (400)
T ss_dssp EEEESCCCSHHHHHHHHTTT--CSEEEECGGGTTBTTS
T ss_pred EEecCCCCCHHHHHHHHHcC--CCEEEEChHHhcCCCC
Confidence 99999999999999999998 9999999999987653
No 75
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.88 E-value=1.2e-08 Score=113.39 Aligned_cols=129 Identities=12% Similarity=0.056 Sum_probs=92.6
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
+|+|+|+||++|. .+++..++++.+++.+ ++||.++-- .+.+.++.+.++|+|+|.
T Consensus 266 aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~v--------~t~~~a~~l~~aGad~I~ 322 (514)
T 1jcn_A 266 AGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGNV--------VTAAQAKNLIDAGVDGLR 322 (514)
T ss_dssp TTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEEE--------CSHHHHHHHHHHTCSEEE
T ss_pred cCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEeccc--------chHHHHHHHHHcCCCEEE
Confidence 6999999998874 2356789999999988 789887611 124568899999999999
Q ss_pred EEcccccccccc-CcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCc
Q psy9514 473 LHGRTREQRYTK-QADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAP 551 (611)
Q Consensus 473 vhgR~r~qr~~~-~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iP 551 (611)
+.........+. ..+|. ......+..++++++. .++|
T Consensus 323 vg~~~G~~~~t~~~~~~g-----------------------------------------~~~~~~~~~~~~~~~~-~~ip 360 (514)
T 1jcn_A 323 VGMGCGSICITQEVMACG-----------------------------------------RPQGTAVYKVAEYARR-FGVP 360 (514)
T ss_dssp ECSSCSCCBTTBCCCSCC-----------------------------------------CCHHHHHHHHHHHHGG-GTCC
T ss_pred ECCCCCcccccccccCCC-----------------------------------------ccchhHHHHHHHHHhh-CCCC
Confidence 832111100000 00010 0112345667776665 4899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
||+.|||.+++|+.+++..| ||+|||||+++..|+.
T Consensus 361 Via~GGI~~~~di~kala~G--Ad~V~iG~~~l~~~e~ 396 (514)
T 1jcn_A 361 IIADGGIQTVGHVVKALALG--ASTVMMGSLLAATTEA 396 (514)
T ss_dssp EEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTSTTS
T ss_pred EEEECCCCCHHHHHHHHHcC--CCeeeECHHHHcCCcC
Confidence 99999999999999999997 9999999999999864
No 76
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=98.87 E-value=4.9e-10 Score=97.49 Aligned_cols=56 Identities=25% Similarity=0.577 Sum_probs=47.8
Q ss_pred CcccCCcccccCCCCCCCCCCCCCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCccccCccCC
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGEKCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGSSHLDENGG 143 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~h~~~~~~ 143 (611)
....+|..|+.+ .|.+|++|+|+|| ...|++|...|.|++|.+|+|...+..+...
T Consensus 11 ~k~~lC~~f~~G----~C~~G~~C~f~H~------------~~~C~~f~~~G~C~~G~~C~f~H~~~~~~~~ 66 (98)
T 2cqe_A 11 KKRELCKFYITG----FCARAENCPYMHG------------DFPCKLYHTTGNCINGDDCMFSHDPLTEETR 66 (98)
T ss_dssp CCCSBCTTTTTT----CCSCSTTCSSBSS------------SSBCSHHHHTSCCSSCTTCSSBCCCCCHHHH
T ss_pred CCCccCcccccC----cCCCCCCCCCCCC------------CCcCcCcccCCcCCCCCCCcccCCCCcccch
Confidence 457899999764 6999999999999 5679999999999999999999877654433
No 77
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.84 E-value=9.1e-09 Score=113.82 Aligned_cols=126 Identities=15% Similarity=0.051 Sum_probs=91.8
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
+|+|.|+||.+|| +...+.++++.+++.. ++||.+.--. +.+.++.+.++|+|+|.
T Consensus 242 aG~d~I~id~a~g---------------~~~~~~~~i~~ir~~~p~~~Vi~g~v~--------t~e~a~~l~~aGaD~I~ 298 (496)
T 4fxs_A 242 AGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGGNVA--------TAEGARALIEAGVSAVK 298 (496)
T ss_dssp TTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCCEEEEEEC--------SHHHHHHHHHHTCSEEE
T ss_pred ccCceEEeccccc---------------cchHHHHHHHHHHHHCCCceEEEcccC--------cHHHHHHHHHhCCCEEE
Confidence 4999999999997 2355778999999988 7899884221 23567889999999999
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhC--CCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC--SPA 550 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~--~~i 550 (611)
|.+...... .++.....+.+.+..+.++++.. .++
T Consensus 299 Vg~g~Gs~~-------------------------------------------~tr~~~g~g~p~~~~i~~v~~~~~~~~i 335 (496)
T 4fxs_A 299 VGIGPGSIC-------------------------------------------TTRIVTGVGVPQITAIADAAGVANEYGI 335 (496)
T ss_dssp ECSSCCTTB-------------------------------------------CHHHHHCCCCCHHHHHHHHHHHHGGGTC
T ss_pred ECCCCCcCc-------------------------------------------ccccccCCCccHHHHHHHHHHHhccCCC
Confidence 854321110 00000023445666676666532 279
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 551 PLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 551 PVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
|||+.|||.+++|+.+++..| ||+|||||.++.-.
T Consensus 336 PVIa~GGI~~~~di~kala~G--Ad~V~iGs~f~~t~ 370 (496)
T 4fxs_A 336 PVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTE 370 (496)
T ss_dssp CEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBT
T ss_pred eEEEeCCCCCHHHHHHHHHcC--CCeEEecHHHhcCC
Confidence 999999999999999999997 99999999988744
No 78
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.80 E-value=3e-08 Score=109.51 Aligned_cols=140 Identities=14% Similarity=0.051 Sum_probs=97.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~ 457 (611)
.++.+..+...+ .+|+|.|+||.+|+. +..+.++++.+++.. ++||.+.--. +.
T Consensus 227 ~~~~~~~a~~l~--~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v~--------t~ 281 (490)
T 4avf_A 227 GADTGERVAALV--AAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNIA--------TA 281 (490)
T ss_dssp STTHHHHHHHHH--HTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEEC--------SH
T ss_pred ccchHHHHHHHh--hcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeeeC--------cH
Confidence 344444444444 359999999999872 345678999999988 6788885221 23
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 537 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~ 537 (611)
+.++.+.++|+|+|.|..+..... .++.....+.+.+
T Consensus 282 e~a~~l~~aGaD~I~vg~g~Gs~~-------------------------------------------~t~~~~g~g~p~~ 318 (490)
T 4avf_A 282 EAAKALAEAGADAVKVGIGPGSIC-------------------------------------------TTRIVAGVGVPQI 318 (490)
T ss_dssp HHHHHHHHTTCSEEEECSSCSTTC-------------------------------------------HHHHHTCBCCCHH
T ss_pred HHHHHHHHcCCCEEEECCCCCcCC-------------------------------------------CccccCCCCccHH
Confidence 567889999999999833211000 0000002344567
Q ss_pred HHHHHHHhhC--CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 538 DYIEKCAQLC--SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 538 ~~i~~~~k~~--~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
..+.++++.. .++|||+.|||.+++|+.+++..| ||+||||++++.-.+
T Consensus 319 ~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~G--Ad~V~vGs~~~~~~E 369 (490)
T 4avf_A 319 SAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAG--AYCVMMGSMFAGTEE 369 (490)
T ss_dssp HHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHT--CSEEEECTTTTTBTT
T ss_pred HHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcC--CCeeeecHHHhcCCC
Confidence 7777776532 379999999999999999999998 999999999887553
No 79
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.74 E-value=1.7e-08 Score=100.92 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=81.1
Q ss_pred EEEEEEccccCCc----hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcC
Q psy9514 441 ITVKTRTGIHKDN----NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWG 516 (611)
Q Consensus 441 vtVKiR~g~~~~~----~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G 516 (611)
..||+|.|+.++. .+..++++.++++|+++|+++.......
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~----------------------------------- 57 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIE----------------------------------- 57 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHH-----------------------------------
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEeccccccc-----------------------------------
Confidence 4678888876554 4678999999999999999987543211
Q ss_pred CceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 517 ASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 517 ~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
....+++.++++. . .++||+.+|+|.+++++.++++.| ||+|++|++++.+|+++.++
T Consensus 58 ---------------~~~~~~~~i~~i~-~-~~ipvi~~Ggi~~~~~~~~~~~~G--ad~V~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 58 ---------------NSGENLPVLEKLS-E-FAEHIQIGGGIRSLDYAEKLRKLG--YRRQIVSSKVLEDPSFLKSL 115 (241)
T ss_dssp ---------------CCCTTHHHHHHGG-G-GGGGEEEESSCCSHHHHHHHHHTT--CCEEEECHHHHHCTTHHHHH
T ss_pred ---------------CCchhHHHHHHHH-h-cCCcEEEECCCCCHHHHHHHHHCC--CCEEEECchHhhChHHHHHH
Confidence 1234577777765 4 589999999999999999999987 99999999999999999999
No 80
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.74 E-value=2.6e-07 Score=95.33 Aligned_cols=169 Identities=15% Similarity=0.121 Sum_probs=106.9
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|+++|+++.+.|.+... ..|..+...++. ++.+++.+++|+.++++.+. .+.++.+.++|++.|..
T Consensus 40 ~Ga~~i~~~e~v~~~~~~--~~G~~~~~~~~~----i~~i~~~~~~Pvi~~~~~~~-------~~~~~~~~~aGad~v~~ 106 (297)
T 2zbt_A 40 AGAVAVMALERVPADIRA--QGGVARMSDPKI----IKEIMAAVSIPVMAKVRIGH-------FVEAMILEAIGVDFIDE 106 (297)
T ss_dssp HTCSEEEECSSCHHHHHH--TTCCCCCCCHHH----HHHHHTTCSSCEEEEEETTC-------HHHHHHHHHTTCSEEEE
T ss_pred CCCcEEEeccccchHHHh--hcCCccCCCHHH----HHHHHHhcCCCeEEEeccCC-------HHHHHHHHHCCCCEEee
Confidence 499999998777643211 234456666654 45667777899999888762 35677888999999954
Q ss_pred EccccccccccCcChhHHHHHhhhcccCc----hhhhhcchhhHhcCCceEEeccc------------------------
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDN----NIIHNFMPKFRDWGASLITLHGR------------------------ 525 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~----~~~~~~~~~l~~~G~~~itihgr------------------------ 525 (611)
+....... + +..+...-.... ....+.+....+.|++.|++||-
T Consensus 107 ~~~~~~~~------~--~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~ 178 (297)
T 2zbt_A 107 SEVLTPAD------E--EHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQ 178 (297)
T ss_dssp ETTSCCSC------S--SCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHH
T ss_pred eCCCChHH------H--HHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcC
Confidence 43211000 0 000000000000 00111123456789999988852
Q ss_pred --ccccc----ccCCccHHHHHHHHhhCCCCcEE--EecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 526 --TREQR----YTKQADWDYIEKCAQLCSPAPLY--GNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 526 --tr~g~----~~~~a~~~~i~~~~k~~~~iPVI--gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
|.... ...+.+++.++++.+. .++||| +.|||.|++++.++++.| +|+|+||++++..
T Consensus 179 g~t~~~~~~~~~~~~~~~~~i~~l~~~-~~~pvi~~a~GGI~~~e~i~~~~~aG--adgvvvGsai~~~ 244 (297)
T 2zbt_A 179 SLREDELMAYAKEIGAPFELVKWVHDH-GRLPVVNFAAGGIATPADAALMMHLG--MDGVFVGSGIFKS 244 (297)
T ss_dssp HSCGGGHHHHHHHHTCCHHHHHHHHHH-SSCSSCEEBCSSCCSHHHHHHHHHTT--CSEEEECGGGGGS
T ss_pred CcCCCCchhhhhcchhhHHHHHHHHHh-cCCCcEEEeeCCCCCHHHHHHHHHcC--CCEEEEchHHhCC
Confidence 11110 0134567888888765 478988 999999999999999987 9999999999953
No 81
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.72 E-value=3.1e-07 Score=98.19 Aligned_cols=148 Identities=10% Similarity=0.057 Sum_probs=117.7
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRT 447 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~ 447 (611)
.++...+.+.+++.+.++|+.+.+ .||++|+|++|| ++++..+++++|+++++ +++.+...-
T Consensus 137 v~~~~~~~~~~~e~~~~~a~~~~~-~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~ 199 (384)
T 2pgw_A 137 VGYFYFLQGETAEELARDAAVGHA-QGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANE 199 (384)
T ss_dssp EEBCEECCCSSHHHHHHHHHHHHH-TTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTT
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH-cCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCC
Confidence 444455566789999888888764 599999999875 57888999999999995 666665544
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
++ +.+++.++++.|++.|+++|. |.
T Consensus 200 ~~--~~~~a~~~~~~l~~~~i~~iE-------qP---------------------------------------------- 224 (384)
T 2pgw_A 200 GW--SVHDAINMCRKLEKYDIEFIE-------QP---------------------------------------------- 224 (384)
T ss_dssp CC--CHHHHHHHHHHHGGGCCSEEE-------CC----------------------------------------------
T ss_pred CC--CHHHHHHHHHHHHhcCCCEEe-------CC----------------------------------------------
Confidence 44 346788999999999998864 21
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
..+.+|+.++++.+. .++||++++.+.+++++.++++.+ .+|.|++..+.+-.++-+.+|.
T Consensus 225 ----~~~~~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i~ 285 (384)
T 2pgw_A 225 ----TVSWSIPAMAHVREK-VGIPIVADQAAFTLYDVYEICRQR-AADMICIGPREIGGIQPMMKAA 285 (384)
T ss_dssp ----SCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHHH
T ss_pred ----CChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEcchhhCCHHHHHHHH
Confidence 133467777777665 489999999999999999999998 8999999999999998777764
No 82
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.71 E-value=4.8e-07 Score=95.79 Aligned_cols=125 Identities=11% Similarity=0.065 Sum_probs=83.3
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.|++.|++++.. | ++..+.+.++.+++.. ++||.++.-+ +.+.++.+.++|+|+|.
T Consensus 131 ~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~--------t~e~A~~a~~aGaD~I~ 187 (351)
T 2c6q_A 131 PQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNVV--------TGEMVEELILSGADIIK 187 (351)
T ss_dssp TTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEEC--------SHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeCC--------CHHHHHHHHHhCCCEEE
Confidence 378888887532 1 3455678899999988 7898876332 23567889999999998
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHH---HhhCCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKC---AQLCSP 549 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~---~k~~~~ 549 (611)
|...... |.. ...+. -.+.+....+.++ ++. .+
T Consensus 188 v~~g~G~--------~~~------------------~r~~~-----------------g~~~p~~~~l~~v~~~~~~-~~ 223 (351)
T 2c6q_A 188 VGIGPGS--------VCT------------------TRKKT-----------------GVGYPQLSAVMECADAAHG-LK 223 (351)
T ss_dssp ECSSCST--------TBC------------------HHHHH-----------------CBCCCHHHHHHHHHHHHHH-TT
T ss_pred ECCCCCc--------CcC------------------ccccC-----------------CCCccHHHHHHHHHHHHhh-cC
Confidence 8532110 000 00000 0112223333333 332 47
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 550 APLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 550 iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
+|||+.|||.++.|+.+++..| ||+|||||.+|.-+
T Consensus 224 ipvIa~GGI~~g~di~kAlalG--A~~V~vG~~fl~~~ 259 (351)
T 2c6q_A 224 GHIISDGGCSCPGDVAKAFGAG--ADFVMLGGMLAGHS 259 (351)
T ss_dssp CEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBT
T ss_pred CcEEEeCCCCCHHHHHHHHHcC--CCceeccHHHhcCc
Confidence 9999999999999999999998 99999999998643
No 83
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.70 E-value=6.9e-07 Score=90.70 Aligned_cols=57 Identities=21% Similarity=0.408 Sum_probs=44.4
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCC--HHHHH----HHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILS--YEDYT----ESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s--~eda~----~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+|+.++++.+.. ++||++.|||.+ ++|+. ++++.| +++|++||+++..||.+..+++
T Consensus 190 ~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~G--a~gv~vg~~i~~~~~~~~~~~~ 252 (273)
T 2qjg_A 190 DIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAG--AAGVAVGRNIFQHDDVVGITRA 252 (273)
T ss_dssp SHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHT--CSEEECCHHHHTSSSHHHHHHH
T ss_pred CHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcC--CcEEEeeHHhhCCCCHHHHHHH
Confidence 456666666554 899999999994 88844 445676 9999999999999998766543
No 84
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.64 E-value=1.3e-06 Score=90.43 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=102.2
Q ss_pred cccceEEe--ccCCCccceecccccc-ccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCE
Q psy9514 394 MVVDFVDV--NLGCPIEFIYKQGSGS-GLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 394 ~g~D~IEL--N~gCP~~~v~~~g~Gs-aLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
.|.++|-+ |..|+.. . +|+ .....++ .|+.+++.+.+||.+|.|.+. ...++.++++|+|+
T Consensus 40 ~GA~~lsvLe~~~~Di~---~--~~g~~R~~~~~----~i~~i~~~v~iPvl~k~~i~~-------ide~qil~aaGAD~ 103 (297)
T 4adt_A 40 AGAIGVMILENIPSELR---N--TDGVARSVDPL----KIEEIRKCISINVLAKVRIGH-------FVEAQILEELKVDM 103 (297)
T ss_dssp HTCSEEEECCCCC----------CCCCCCCCCHH----HHHHHHTTCCSEEEEEEETTC-------HHHHHHHHHTTCSE
T ss_pred cCCCEEEEecCCCCcch---h--cCCcccCCCHH----HHHHHHHhcCCCEEEeccCCc-------HHHHHHHHHcCCCE
Confidence 47777632 7778732 1 222 3444444 457778888999999998764 45677788999999
Q ss_pred EEEEccccccccccCcChhHHHHHhhhcccC--chh------hhhcchhhHhcCCceEEeccccccc-------------
Q psy9514 471 ITLHGRTREQRYTKQADWDYIEKCAQLCSRD--NNI------IHNFMPKFRDWGASLITLHGRTREQ------------- 529 (611)
Q Consensus 471 ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~--~~~------~~~~~~~l~~~G~~~itihgrtr~g------------- 529 (611)
|....... ++++ ...+++. ... ...-+....+.|++.|.++||...|
T Consensus 104 Id~s~~~~------~~~l------i~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~ 171 (297)
T 4adt_A 104 LDESEVLT------MADE------YNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVN 171 (297)
T ss_dssp EEEETTSC------CSCS------SCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHH
T ss_pred EEcCCCCC------HHHH------HHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhh
Confidence 93332211 1111 0111110 000 0011223346799999999872211
Q ss_pred -------------cc----cCCccHHHHHHHHhhCCCCcEE--EecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 530 -------------RY----TKQADWDYIEKCAQLCSPAPLY--GNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 530 -------------~~----~~~a~~~~i~~~~k~~~~iPVI--gnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.+ ....+++.+.++.+. .++||+ +.|||.|++|+.+++..| +|+|+||++++..++
T Consensus 172 ~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~-~~iPVivvA~GGI~t~~dv~~~~~~G--AdgVlVGsai~~a~d 246 (297)
T 4adt_A 172 NEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKL-KRLPVVNFAAGGIATPADAAMCMQLG--MDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHH-TSCSSEEEEESCCCSHHHHHHHHHTT--CSCEEESHHHHTSSC
T ss_pred hhhhhhccccccccccccccCCCCHHHHHHHHHh-cCCCeEEEecCCCCCHHHHHHHHHcC--CCEEEEhHHHHcCCC
Confidence 00 114578888888765 477876 999999999999999997 999999999997544
No 85
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.63 E-value=5.6e-07 Score=90.01 Aligned_cols=197 Identities=14% Similarity=0.162 Sum_probs=120.7
Q ss_pred ceeeecccCch--HHHHHHHHHHHHhcccceEEec--cCCCccceecccccc-----ccc--cChHHHHHHHHHHHhhcC
Q psy9514 370 LFGVQLCGNNP--YVLTKCTQLLEEQMVVDFVDVN--LGCPIEFIYKQGSGS-----GLL--QRANILQSVITCMNEVSS 438 (611)
Q Consensus 370 ~~ivQi~g~~p--~~~~~aA~~l~~~~g~D~IELN--~gCP~~~v~~~g~Gs-----aLl--~r~~~l~eIv~av~~~~~ 438 (611)
.++..+.+.+| +.+.+.++.+.+ . +|.|||+ +++| ......-. +|. .+.....++++.+++.++
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~-~-ad~iel~~p~sdp---~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDE-Y-AGAIELGIPFSDP---IADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGG-G-BSCEEEECCCSCC---TTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHH-c-CCEEEECCCCCCC---CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 46788888888 589999988865 3 9999998 7787 32111100 010 156677899999999888
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch---------hhhhcc
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN---------IIHNFM 509 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~---------~~~~~~ 509 (611)
+||.+...... .......+.++.+.++|++.|+++.-... ....+...+++... ...+.+
T Consensus 81 ~pv~~~~~~~~-~~~~~~~~~~~~~~~~Gad~v~~~~~~~~----------~~~~~~~~~~~~g~~~~~~i~~~t~~e~~ 149 (248)
T 1geq_A 81 TPIVLMTYYNP-IYRAGVRNFLAEAKASGVDGILVVDLPVF----------HAKEFTEIAREEGIKTVFLAAPNTPDERL 149 (248)
T ss_dssp CCEEEEECHHH-HHHHCHHHHHHHHHHHTCCEEEETTCCGG----------GHHHHHHHHHHHTCEEEEEECTTCCHHHH
T ss_pred CCEEEEeccch-hhhcCHHHHHHHHHHCCCCEEEECCCChh----------hHHHHHHHHHHhCCCeEEEECCCCHHHHH
Confidence 89887643110 00011257888999999999999853321 11222222221111 111222
Q ss_pred hhhHhcCCc-eEE---eccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 510 PKFRDWGAS-LIT---LHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 510 ~~l~~~G~~-~it---ihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
..+.+. ++ .+. +.|.+....-..+..++.++++.+.. ++||++.|||++++++.+++..| +|+|.+|++++.
T Consensus 150 ~~~~~~-~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~G--ad~vivGsai~~ 225 (248)
T 1geq_A 150 KVIDDM-TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEG--ANGVVVGSALVK 225 (248)
T ss_dssp HHHHHH-CSSEEEEECCC-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHH
T ss_pred HHHHhc-CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcC--CCEEEEcHHHHh
Confidence 233222 44 332 22222111001123467888887654 89999999999999999999987 999999999886
Q ss_pred C
Q psy9514 586 K 586 (611)
Q Consensus 586 d 586 (611)
.
T Consensus 226 ~ 226 (248)
T 1geq_A 226 I 226 (248)
T ss_dssp H
T ss_pred h
Confidence 5
No 86
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.59 E-value=7e-07 Score=98.52 Aligned_cols=139 Identities=12% Similarity=0.081 Sum_probs=93.2
Q ss_pred HHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHH
Q psy9514 384 TKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPK 462 (611)
Q Consensus 384 ~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~ 462 (611)
.+.+..+. .+|+|+|++|+++- .+....++++.+++.+ ++||.++.-. ..+.++.
T Consensus 239 ~~~a~~l~-~aGvd~v~i~~~~G---------------~~~~~~e~i~~i~~~~p~~pvi~g~~~--------t~e~a~~ 294 (494)
T 1vrd_A 239 MERVEKLV-KAGVDVIVIDTAHG---------------HSRRVIETLEMIKADYPDLPVVAGNVA--------TPEGTEA 294 (494)
T ss_dssp HHHHHHHH-HTTCSEEEECCSCC---------------SSHHHHHHHHHHHHHCTTSCEEEEEEC--------SHHHHHH
T ss_pred HHHHHHHH-HhCCCEEEEEecCC---------------chHHHHHHHHHHHHHCCCceEEeCCcC--------CHHHHHH
Confidence 33444443 35999999986531 2356778999999988 6999885221 1244578
Q ss_pred HHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHH
Q psy9514 463 FRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEK 542 (611)
Q Consensus 463 l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~ 542 (611)
+.++|+|+|.+.+....... . ..+. ..+.+.+..+..
T Consensus 295 l~~~G~d~I~v~~~~G~~~~----~----------------------~~~~-----------------~~g~p~~~~l~~ 331 (494)
T 1vrd_A 295 LIKAGADAVKVGVGPGSICT----T----------------------RVVA-----------------GVGVPQLTAVME 331 (494)
T ss_dssp HHHTTCSEEEECSSCSTTCH----H----------------------HHHH-----------------CCCCCHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCcccc----c----------------------cccC-----------------CCCccHHHHHHH
Confidence 88999999999543210000 0 0000 112234444444
Q ss_pred HHhh--CCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHH
Q psy9514 543 CAQL--CSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQ 591 (611)
Q Consensus 543 ~~k~--~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ 591 (611)
+.+. ..++|||+.|||.+++|+.+++..| ||+||+||+++..|++..
T Consensus 332 v~~~~~~~~ipvia~GGI~~~~di~kala~G--Ad~V~iGr~~l~~~e~~~ 380 (494)
T 1vrd_A 332 CSEVARKYDVPIIADGGIRYSGDIVKALAAG--AESVMVGSIFAGTEEAPG 380 (494)
T ss_dssp HHHHHHTTTCCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSSS
T ss_pred HHHHHhhcCCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHhcCCcCCc
Confidence 4332 2479999999999999999999998 999999999999887743
No 87
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.57 E-value=9.6e-07 Score=86.06 Aligned_cols=179 Identities=16% Similarity=0.129 Sum_probs=115.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhh-cCCCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEV-SSLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~-~~~PvtVKiR~g~~~~~~~a~ 457 (611)
+.+...+.++.+. .|+|.||+-. |.. ... | .++++.+++. .+.||.+-+-+. +. ..
T Consensus 11 ~~~~~~~~~~~~~--~~~diie~G~--p~~--~~~--g----------~~~i~~ir~~~~~~~i~~~~~~~--~~---~~ 67 (211)
T 3f4w_A 11 TLPEAMVFMDKVV--DDVDIIEVGT--PFL--IRE--G----------VNAIKAIKEKYPHKEVLADAKIM--DG---GH 67 (211)
T ss_dssp CHHHHHHHHHHHG--GGCSEEEECH--HHH--HHH--T----------THHHHHHHHHCTTSEEEEEEEEC--SC---HH
T ss_pred CHHHHHHHHHHhh--cCccEEEeCc--HHH--Hhc--c----------HHHHHHHHHhCCCCEEEEEEEec--cc---hH
Confidence 5667777777763 4889988854 521 111 1 3678888877 478875543322 11 22
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch----------hhhhcchhhHhcCCceEEeccccc
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN----------IIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~----------~~~~~~~~l~~~G~~~itihgrtr 527 (611)
.+++.+.++|++.|++|.-... ..+.++.+.+++... ...+.+..+.+.|++.+.++...
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~~---------~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~- 137 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTDV---------LTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGT- 137 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSCH---------HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCH-
T ss_pred HHHHHHHhcCCCEEEEeCCCCh---------hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCC-
Confidence 4688899999999999986521 112222222222111 11234567778999998775221
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+...+...++.++++.+...++||++.|||+ ++++.++++.| +|+|++||+++..++..+.+
T Consensus 138 ~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~G--ad~vvvGsai~~~~d~~~~~ 200 (211)
T 3f4w_A 138 DQQAAGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLG--PDVVIVGSAITHAADPAGEA 200 (211)
T ss_dssp HHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTC--CSEEEECHHHHTCSSHHHHH
T ss_pred cccccCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcC--CCEEEECHHHcCCCCHHHHH
Confidence 11112223678888877665589999999995 99999999987 99999999999877755444
No 88
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.56 E-value=6.9e-06 Score=82.57 Aligned_cols=137 Identities=8% Similarity=0.020 Sum_probs=93.1
Q ss_pred chHHHHHHHHHHHH-hcccceEEecc--CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchH
Q psy9514 379 NPYVLTKCTQLLEE-QMVVDFVDVNL--GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNI 455 (611)
Q Consensus 379 ~p~~~~~aA~~l~~-~~g~D~IELN~--gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~ 455 (611)
+++++...|+.+.+ ..+-+.|-|-. -.+ .|+.++..+.+..+.+.+. |+.+..- + .+
T Consensus 85 ta~eAv~~a~lare~~~~~~~iKlEv~~d~~-----------~llpD~~~tv~aa~~L~~~-Gf~Vlpy--~--~d---- 144 (265)
T 1wv2_A 85 DAVEAVRTCRLARELLDGHNLVKLEVLADQK-----------TLFPNVVETLKAAEQLVKD-GFDVMVY--T--SD---- 144 (265)
T ss_dssp SHHHHHHHHHHHHTTTTSCCEEEECCBSCTT-----------TCCBCHHHHHHHHHHHHTT-TCEEEEE--E--CS----
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEeecCcc-----------ccCcCHHHHHHHHHHHHHC-CCEEEEE--e--CC----
Confidence 67788889888877 56777775542 122 4556666555555544331 3322211 1 12
Q ss_pred HHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc
Q psy9514 456 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA 535 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a 535 (611)
...+++++++.|+++|..++..-.. -.+..
T Consensus 145 d~~~akrl~~~G~~aVmPlg~pIGs--------------------------------------------------G~Gi~ 174 (265)
T 1wv2_A 145 DPIIARQLAEIGCIAVMPLAGLIGS--------------------------------------------------GLGIC 174 (265)
T ss_dssp CHHHHHHHHHSCCSEEEECSSSTTC--------------------------------------------------CCCCS
T ss_pred CHHHHHHHHHhCCCEEEeCCccCCC--------------------------------------------------CCCcC
Confidence 2467889999999998776653110 12334
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh--CCc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI--KPW 588 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~--dP~ 588 (611)
+++.|..+.+. .++|||..|||.+++|+..+++.| +|+|++|.++.. ||.
T Consensus 175 ~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLG--AdgVlVgSAI~~a~dP~ 226 (265)
T 1wv2_A 175 NPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELG--CEAVLMNTAIAHAKDPV 226 (265)
T ss_dssp CHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHT--CSEEEESHHHHTSSSHH
T ss_pred CHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcC--CCEEEEChHHhCCCCHH
Confidence 67888888774 689999999999999999999998 999999998864 464
No 89
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.52 E-value=4.8e-07 Score=100.42 Aligned_cols=126 Identities=14% Similarity=0.092 Sum_probs=87.1
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
+|+|.|.|+..|| +...+.++++.+++..+ .||.++--. +.+.++.+.++|+|+|.
T Consensus 267 aGvd~I~Id~a~g---------------~~~~v~~~i~~i~~~~~~~~vi~g~v~--------t~e~a~~~~~aGad~i~ 323 (511)
T 3usb_A 267 ASVDAIVLDTAHG---------------HSQGVIDKVKEVRAKYPSLNIIAGNVA--------TAEATKALIEAGANVVK 323 (511)
T ss_dssp TTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTSEEEEEEEC--------SHHHHHHHHHHTCSEEE
T ss_pred hccceEEeccccc---------------chhhhhhHHHHHHHhCCCceEEeeeec--------cHHHHHHHHHhCCCEEE
Confidence 5999999998887 23446788999988874 788876321 23568889999999998
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhC--CCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC--SPA 550 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~--~~i 550 (611)
+......-. .++.....+.+.+..+.++++.. .++
T Consensus 324 vg~g~gsi~-------------------------------------------~~~~~~g~g~p~~~~l~~v~~~~~~~~i 360 (511)
T 3usb_A 324 VGIGPGSIC-------------------------------------------TTRVVAGVGVPQLTAVYDCATEARKHGI 360 (511)
T ss_dssp ECSSCSTTC-------------------------------------------CHHHHHCCCCCHHHHHHHHHHHHHTTTC
T ss_pred ECCCCcccc-------------------------------------------ccccccCCCCCcHHHHHHHHHHHHhCCC
Confidence 822211000 00000023345566655543322 369
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 551 PLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 551 PVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
|||+.|||.+++|+.+++..| ||+|||||+++.-.
T Consensus 361 PVIa~GGI~~~~di~kala~G--A~~V~vGs~~~~~~ 395 (511)
T 3usb_A 361 PVIADGGIKYSGDMVKALAAG--AHVVMLGSMFAGVA 395 (511)
T ss_dssp CEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBT
T ss_pred cEEEeCCCCCHHHHHHHHHhC--chhheecHHHhcCc
Confidence 999999999999999999998 99999999876544
No 90
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.50 E-value=1.6e-06 Score=92.50 Aligned_cols=143 Identities=6% Similarity=-0.077 Sum_probs=110.9
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRT 447 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~ 447 (611)
++...+...+++.+.++|+.+. ..||++|+|++|| ++++..+++++|+++++ ++|.+...-
T Consensus 136 ~~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 136 PMYRVAPQRSEAETRAELARHR-AAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EBCEECCCSCSHHHHHHHHHHH-HTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eEEEEecCCCHHHHHHHHHHHH-HcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 3434444468899988888875 3599999999887 36788999999999985 667666555
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
++ +.+++.++++.|++.|+ +|. |.
T Consensus 199 ~~--~~~~a~~~~~~l~~~~i-~iE-------~P---------------------------------------------- 222 (379)
T 2rdx_A 199 GW--RVDNAIRLARATRDLDY-ILE-------QP---------------------------------------------- 222 (379)
T ss_dssp CS--CHHHHHHHHHHTTTSCC-EEE-------CC----------------------------------------------
T ss_pred CC--CHHHHHHHHHHHHhCCe-EEe-------CC----------------------------------------------
Confidence 55 34678899999999988 762 22
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
+. +|+.++++.+. .++||++.+.+++++++.++++.+ .+|.|++-.+.+-.++-+.+|
T Consensus 223 ---~~---~~~~~~~l~~~-~~iPI~~de~i~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 223 ---CR---SYEECQQVRRV-ADQPMKLDECVTGLHMAQRIVADR-GAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp ---SS---SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHT-CCSEEEEETTTTTSHHHHHHH
T ss_pred ---cC---CHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEeccccCCHHHHHHH
Confidence 21 66777776554 589999999999999999999998 899999988877777666555
No 91
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.49 E-value=1.3e-06 Score=87.89 Aligned_cols=200 Identities=14% Similarity=0.171 Sum_probs=120.8
Q ss_pred ecCCChhhHHHHHHHHhhhc--cceeeeccC---CCCcchhhccCCCcccc---ccccceeeecccC--chHHHHHHHHH
Q psy9514 320 LCGNNPYVLTKCTQLLEEQM--AVDFVDVNL---GCPIEFIYKQGSGSGLL---QRANLFGVQLCGN--NPYVLTKCTQL 389 (611)
Q Consensus 320 i~g~~p~~~~~~a~~l~~~~--~v~~idln~---gcp~~~~~~~~~~~~l~---~~~~~~ivQi~g~--~p~~~~~aA~~ 389 (611)
..+.+|-.+++.. .+.+ .+.++||+. |.+... +++ .....+.+|++|. +.+++.++...
T Consensus 28 ~~~~dP~~~a~~~---~~~gad~lhvvDld~a~~~~~~~~--------~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~ 96 (243)
T 4gj1_A 28 VYKYNPLKKFKEY---EKAGAKELHLVDLTGAKDPSKRQF--------ALIEKLAKEVSVNLQVGGGIRSKEEVKALLDC 96 (243)
T ss_dssp ECCCCHHHHHHHH---HHHTCCEEEEEEHHHHHCGGGCCH--------HHHHHHHHHCCSEEEEESSCCCHHHHHHHHHT
T ss_pred EeCCCHHHHHHHH---HHCCCCEEEEEecCcccccchhHH--------HHHHHHHHhcCCCeEeccccccHHHHHHHHHc
Confidence 3456676655442 2222 467788752 222221 232 2356778899988 66776666443
Q ss_pred HHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCC
Q psy9514 390 LEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGA 468 (611)
Q Consensus 390 l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGv 468 (611)
|+|- .-.|++...+|+++.++.+...... -.-+-++.+ .+
T Consensus 97 -----Gadk--------------Vii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~----~~---------------- 137 (243)
T 4gj1_A 97 -----GVKR--------------VVIGSMAIKDATLCLEILKEFGSEAIVLALDTILK----ED---------------- 137 (243)
T ss_dssp -----TCSE--------------EEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEES----SS----------------
T ss_pred -----CCCE--------------EEEccccccCCchHHHHHhcccCceEEEEEEEEeC----CC----------------
Confidence 3333 3356888999999988887764321 111112111 10
Q ss_pred CEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC
Q psy9514 469 SLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS 548 (611)
Q Consensus 469 d~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~ 548 (611)
-.+.++++.... .....+++..+.+.|+..+.++...++|+..+ .|.+.++.+.+...
T Consensus 138 ~~v~~~gw~~~~---------------------~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G-~d~~l~~~l~~~~~ 195 (243)
T 4gj1_A 138 YVVAVNAWQEAS---------------------DKKLMEVLDFYSNKGLKHILCTDISKDGTMQG-VNVRLYKLIHEIFP 195 (243)
T ss_dssp EEEC-----------------------------CCBHHHHHHHHHTTTCCEEEEEETTC-----C-CCHHHHHHHHHHCT
T ss_pred CEEEecCceecc---------------------cchHHHHHHHHhhcCCcEEEeeeecccccccC-CCHHHHHHHHHhcC
Confidence 123445543221 12234556677788888888888889987655 58899998887766
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 549 PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
++|||+.||+.|++|+.++ ..+ +++|.+|++++..---+++++
T Consensus 196 ~ipviasGGv~~~~Dl~~l-~~~--~~gvivg~Al~~g~i~l~ea~ 238 (243)
T 4gj1_A 196 NICIQASGGVASLKDLENL-KGI--CSGVIVGKALLDGVFSVEEGI 238 (243)
T ss_dssp TSEEEEESCCCSHHHHHHT-TTT--CSEEEECHHHHTTSSCHHHHH
T ss_pred CCCEEEEcCCCCHHHHHHH-Hcc--CchhehHHHHHCCCCCHHHHH
Confidence 8999999999999999876 444 999999999988765566554
No 92
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.49 E-value=1.4e-06 Score=84.53 Aligned_cols=175 Identities=11% Similarity=0.087 Sum_probs=113.1
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
..++++.+.+.+++++.+.++.+. ..|++.||+++.+|. ..++++.+++..+..+.+..-
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~-~~G~~~iev~~~~~~------------------~~~~i~~ir~~~~~~~~ig~~- 68 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVF-EGGVHLIEITFTVPD------------------ADTVIKELSFLKEKGAIIGAG- 68 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHH-HTTCCEEEEETTSTT------------------HHHHHHHTHHHHHTTCEEEEE-
T ss_pred hCCEEEEEecCCHHHHHHHHHHHH-HCCCCEEEEeCCChh------------------HHHHHHHHHHHCCCCcEEEec-
Confidence 356788889999999999998885 469999999998871 135677777765433433322
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-cccC-chhhhhcchhhHhcCCceEEeccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-CSRD-NNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-~~~~-~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.-.+. +-++.+.++|+|+| ++..... +.+..+... ++-. .-.+...+....+.|++.+.++..
T Consensus 69 -~v~~~----~~~~~a~~~Gad~i-v~~~~~~---------~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~ 133 (205)
T 1wa3_A 69 -TVTSV----EQCRKAVESGAEFI-VSPHLDE---------EISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPG 133 (205)
T ss_dssp -SCCSH----HHHHHHHHHTCSEE-ECSSCCH---------HHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTH
T ss_pred -ccCCH----HHHHHHHHcCCCEE-EcCCCCH---------HHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCc
Confidence 21222 23566677999999 7655321 111111110 0000 000111233456789998876542
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.. ....+++++.+...++||++.|||+ ++++.+++..| +|+|.+|++++. ++
T Consensus 134 ~~-------~g~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~G--a~~v~vGs~i~~-~d 185 (205)
T 1wa3_A 134 EV-------VGPQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAG--VLAVGVGSALVK-GT 185 (205)
T ss_dssp HH-------HHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHT--CSCEEECHHHHC-SC
T ss_pred cc-------cCHHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCC--CCEEEECccccC-CC
Confidence 11 2356777776655489999999996 89999999998 999999999987 55
No 93
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.49 E-value=6.1e-06 Score=83.91 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=41.5
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
++.++.+.+ ..++||++-|||.+++|+.++++.| +|+|+||++++.-++
T Consensus 167 ~~~l~~i~~-~~~iPviv~gGI~t~eda~~~~~~G--AdgViVGSAi~~a~d 215 (264)
T 1xm3_A 167 PLNLSFIIE-QAKVPVIVDAGIGSPKDAAYAMELG--ADGVLLNTAVSGADD 215 (264)
T ss_dssp HHHHHHHHH-HCSSCBEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTSSS
T ss_pred HHHHHHHHh-cCCCCEEEEeCCCCHHHHHHHHHcC--CCEEEEcHHHhCCCC
Confidence 566666655 4589999999999999999999987 999999999885444
No 94
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=98.48 E-value=1.7e-06 Score=91.44 Aligned_cols=148 Identities=11% Similarity=0.035 Sum_probs=112.9
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.++...+...+++.+.+.|+.+. ..||++|+||+||+ +++...+++++|++++| +++.+...
T Consensus 134 vp~~~~~g~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 134 VQAYDSHSLDGVKLATERAVTAA-ELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp EEEEEECCSCHHHHHHHHHHHHH-HTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eeeeeecCCCCHHHHHHHHHHHH-HcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34444433368888888888775 35999999999883 45778899999999884 67777665
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ .+++.++++.|++.|+++|. |.
T Consensus 198 ~~~~--~~~a~~~~~~l~~~~i~~iE-------~P--------------------------------------------- 223 (359)
T 1mdl_A 198 QSLD--VPAAIKRSQALQQEGVTWIE-------EP--------------------------------------------- 223 (359)
T ss_dssp TCSC--HHHHHHHHHHHHHHTCSCEE-------CC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHHHHhCCCeEE-------CC---------------------------------------------
Confidence 5553 46788999999999998762 22
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+|+.++++.+. .++||++.+.+.|++++.++++.+ .+|.|++-.+.+-.++-+.+|
T Consensus 224 -----~~~~~~~~~~~l~~~-~~iPI~~de~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGi~~~~~i 283 (359)
T 1mdl_A 224 -----TLQHDYEGHQRIQSK-LNVPVQMGENWLGPEEMFKALSIG-ACRLAMPDAMKIGGVTGWIRA 283 (359)
T ss_dssp -----SCTTCHHHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCBTTTTTHHHHHHHH
T ss_pred -----CChhhHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcC-CCCEEeecchhhCCHHHHHHH
Confidence 123467777777654 589999999999999999999998 899999987776666655554
No 95
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.48 E-value=3.5e-06 Score=86.13 Aligned_cols=147 Identities=14% Similarity=0.104 Sum_probs=95.0
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI--- 504 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~--- 504 (611)
+.++.+++.+++||..| +.--+ + .-+..+..+|+|+|.|....-.. ..+.++.+..+.....
T Consensus 103 ~~l~~ir~~v~lPvl~k---dfiid-~---~qv~~A~~~GAD~VlLi~a~l~~--------~~l~~l~~~a~~lGl~~lv 167 (272)
T 3qja_A 103 DDLDAVRASVSIPVLRK---DFVVQ-P---YQIHEARAHGADMLLLIVAALEQ--------SVLVSMLDRTESLGMTALV 167 (272)
T ss_dssp HHHHHHHHHCSSCEEEE---SCCCS-H---HHHHHHHHTTCSEEEEEGGGSCH--------HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCCCCEEEC---ccccC-H---HHHHHHHHcCCCEEEEecccCCH--------HHHHHHHHHHHHCCCcEEE
Confidence 56777888889999866 11111 1 11344567999999986432111 1122222222221111
Q ss_pred ---hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 505 ---IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 505 ---~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+....+.|++.|-+++|+.. +-..+++.+.++++..+ ++|||+.|||+|++|+.+++..| +|+|.||
T Consensus 168 ev~t~ee~~~A~~~Gad~IGv~~r~l~---~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G--adgvlVG 242 (272)
T 3qja_A 168 EVHTEQEADRALKAGAKVIGVNARDLM---TLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG--ADAVLVG 242 (272)
T ss_dssp EESSHHHHHHHHHHTCSEEEEESBCTT---TCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT--CSEEEEC
T ss_pred EcCCHHHHHHHHHCCCCEEEECCCccc---ccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC--CCEEEEc
Confidence 112234455789999988876532 22346677777776654 69999999999999999999998 9999999
Q ss_pred HHhhhCCchHHHHH
Q psy9514 581 RGALIKPWIFQEIK 594 (611)
Q Consensus 581 RgaL~dP~lf~ei~ 594 (611)
++++.-++.-..++
T Consensus 243 sal~~a~dp~~~~~ 256 (272)
T 3qja_A 243 EGLVTSGDPRAAVA 256 (272)
T ss_dssp HHHHTCSCHHHHHH
T ss_pred HHHhCCCCHHHHHH
Confidence 99998776544443
No 96
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.41 E-value=2.3e-06 Score=90.96 Aligned_cols=139 Identities=9% Similarity=0.056 Sum_probs=111.0
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.+.+.|+.+. ..||++|+|++||+ +++...+++++|++++| +++.+...-+++ .+++
T Consensus 146 ~~e~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~--~~~a 207 (371)
T 2ovl_A 146 PVADLKTQADRFL-AGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWT--VDGA 207 (371)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSC--HHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HHHH
Confidence 7888888888775 35999999999985 35678899999999884 778877766653 4678
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+++|. |. ..+.+
T Consensus 208 ~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d 230 (371)
T 2ovl_A 208 IRAARALAPFDLHWIE-------EP--------------------------------------------------TIPDD 230 (371)
T ss_dssp HHHHHHHGGGCCSEEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHHhcCCCEEE-------CC--------------------------------------------------CCccc
Confidence 8999999999998763 22 12346
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
|+.++++.+.. ++||++.+.+.|++++.++++.+ .+|.|++..+.+-.++-+.+|.
T Consensus 231 ~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGi~~~~~i~ 286 (371)
T 2ovl_A 231 LVGNARIVRES-GHTIAGGENLHTLYDFHNAVRAG-SLTLPEPDVSNIGGYTTFRKVA 286 (371)
T ss_dssp HHHHHHHHHHH-CSCEEECTTCCSHHHHHHHHHHT-CCSEECCCTTTTTSHHHHHHHH
T ss_pred HHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcC-CCCEEeeCccccCCHHHHHHHH
Confidence 67777776654 89999999999999999999998 8999999988877777666654
No 97
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.40 E-value=6.9e-07 Score=89.44 Aligned_cols=89 Identities=17% Similarity=0.231 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
+..++++.++++|+++|+++....... ...
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~--------------------------------------------------~~~ 60 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVE--------------------------------------------------KRK 60 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSS--------------------------------------------------HHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhc--------------------------------------------------CCc
Confidence 467888999999999999986542110 112
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
.+++.++++.+. .++||+.+|+|.++++++++++.| ||+|++|+.++.+|+++.++.+.
T Consensus 61 ~~~~~i~~i~~~-~~ipvi~~ggI~~~~~~~~~~~~G--ad~V~lg~~~l~~p~~~~~~~~~ 119 (253)
T 1thf_D 61 TMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRG--ADKVSINTAAVENPSLITQIAQT 119 (253)
T ss_dssp HHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHHCTHHHHHHHHH
T ss_pred ccHHHHHHHHHh-CCCCEEEeCCCCCHHHHHHHHHcC--CCEEEEChHHHhChHHHHHHHHH
Confidence 356677777654 589999999999999999999987 99999999999999999888654
No 98
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.39 E-value=5.2e-06 Score=83.94 Aligned_cols=194 Identities=14% Similarity=0.192 Sum_probs=112.4
Q ss_pred eeeecccCch--HHHHHHHHHHHHhcccceEEeccCCCccceeccc------cccccc--cChHHHHHHHHHHHhhcCCC
Q psy9514 371 FGVQLCGNNP--YVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQG------SGSGLL--QRANILQSVITCMNEVSSLP 440 (611)
Q Consensus 371 ~ivQi~g~~p--~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g------~GsaLl--~r~~~l~eIv~av~~~~~~P 440 (611)
++.-+...++ +.+.+.++.+. ..|+|.|||+..++-+.. +| .-.+|. -++....++++.+++.+++|
T Consensus 20 ~~~~i~~g~~~~~~~~~~~~~l~-~~Gad~ielg~p~~dp~~--dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~P 96 (262)
T 1rd5_A 20 FIPYITAGDPDLATTAEALRLLD-GCGADVIELGVPCSDPYI--DGPIIQASVARALASGTTMDAVLEMLREVTPELSCP 96 (262)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEECCCSCCTT--SCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSC
T ss_pred EEEEeeCCCCCHHHHHHHHHHHH-HcCCCEEEECCCCCCccc--CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 3344444444 67777777775 469999999865531111 11 011111 26788889999999988899
Q ss_pred EEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc--------h-hhhhcchh
Q psy9514 441 ITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN--------N-IIHNFMPK 511 (611)
Q Consensus 441 vtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~--------~-~~~~~~~~ 511 (611)
|.+..+.. +.....++.+.++|++.|+++.-... .+.++...+++.. . ...+.+..
T Consensus 97 v~~m~~~~-----~~~~~~~~~a~~aGadgv~v~d~~~~----------~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~ 161 (262)
T 1rd5_A 97 VVLLSYYK-----PIMFRSLAKMKEAGVHGLIVPDLPYV----------AAHSLWSEAKNNNLELVLLTTPAIPEDRMKE 161 (262)
T ss_dssp EEEECCSH-----HHHSCCTHHHHHTTCCEEECTTCBTT----------THHHHHHHHHHTTCEECEEECTTSCHHHHHH
T ss_pred EEEEecCc-----HHHHHHHHHHHHcCCCEEEEcCCChh----------hHHHHHHHHHHcCCceEEEECCCCCHHHHHH
Confidence 87743221 11111123488999999998753321 1122222222111 0 11122233
Q ss_pred hHhcCCceEE---eccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 512 FRDWGASLIT---LHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 512 l~~~G~~~it---ihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
+...+.+.+. +.|.|....-..+...+.++++.+. .++||++.|||+|++++.+++..| +|+|+||.+++.
T Consensus 162 ~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~-~~~pI~vgGGI~~~e~~~~~~~~G--AdgvvVGSai~~ 235 (262)
T 1rd5_A 162 ITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV-TNKPVAVGFGISKPEHVKQIAQWG--ADGVIIGSAMVR 235 (262)
T ss_dssp HHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHH
T ss_pred HHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhh-cCCeEEEECCcCCHHHHHHHHHcC--CCEEEEChHHHh
Confidence 3334444442 2232332111122345677777665 489999999999999999999987 999999988664
No 99
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.36 E-value=1.2e-05 Score=82.16 Aligned_cols=147 Identities=17% Similarity=0.191 Sum_probs=99.4
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI--- 504 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~--- 504 (611)
+.++.+++.+++||..|= ...+ + . -+..+..+|+|+|.+....... ..+.++.+..+.....
T Consensus 110 ~~L~~ir~~v~lPVl~Kd--fi~d--~--~-qi~ea~~~GAD~VlLi~a~L~~--------~~l~~l~~~a~~lGl~~lv 174 (272)
T 3tsm_A 110 EFLTAARQACSLPALRKD--FLFD--P--Y-QVYEARSWGADCILIIMASVDD--------DLAKELEDTAFALGMDALI 174 (272)
T ss_dssp HHHHHHHHTSSSCEEEES--CCCS--T--H-HHHHHHHTTCSEEEEETTTSCH--------HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCEEECC--ccCC--H--H-HHHHHHHcCCCEEEEcccccCH--------HHHHHHHHHHHHcCCeEEE
Confidence 345777888899998661 1111 1 1 2445678999999998765321 2233333333332221
Q ss_pred ---hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 505 ---IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 505 ---~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+-+....+.|++.|-+..|.-. +-..+++...++++..+ ++|||+.|||+|++|+.++.+.| +|+|.||
T Consensus 175 evh~~eEl~~A~~~ga~iIGinnr~l~---t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~G--a~gvLVG 249 (272)
T 3tsm_A 175 EVHDEAEMERALKLSSRLLGVNNRNLR---SFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSG--IGTFLIG 249 (272)
T ss_dssp EECSHHHHHHHTTSCCSEEEEECBCTT---TCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTT--CCEEEEC
T ss_pred EeCCHHHHHHHHhcCCCEEEECCCCCc---cCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcC--CCEEEEc
Confidence 112234556789999987766442 23456777777777654 59999999999999999999987 9999999
Q ss_pred HHhhhCCchHHHHH
Q psy9514 581 RGALIKPWIFQEIK 594 (611)
Q Consensus 581 RgaL~dP~lf~ei~ 594 (611)
.+++.-+++-..++
T Consensus 250 ~almr~~d~~~~~~ 263 (272)
T 3tsm_A 250 ESLMRQHDVAAATR 263 (272)
T ss_dssp HHHHTSSCHHHHHH
T ss_pred HHHcCCcCHHHHHH
Confidence 99999888766654
No 100
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.35 E-value=4.4e-06 Score=89.34 Aligned_cols=147 Identities=10% Similarity=-0.004 Sum_probs=112.0
Q ss_pred cceeeecc-cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 369 NLFGVQLC-GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 369 ~~~ivQi~-g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
.++...+. ..+++.+.+.|+.+. ..||++|+|++|| .++++ .+++++|+++++ ++|.+..
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDa 215 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQ-DRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADM 215 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHH-HTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEEC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHH-HhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEEC
Confidence 44444443 358999988888875 3599999999875 24677 899999999884 6777776
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.-+++ .+++.++++.|++.|+++|. |.
T Consensus 216 n~~~~--~~~a~~~~~~l~~~~i~~iE-------qP-------------------------------------------- 242 (388)
T 2nql_A 216 HWNQT--PERALELIAEMQPFDPWFAE-------AP-------------------------------------------- 242 (388)
T ss_dssp CSCSC--HHHHHHHHHHHGGGCCSCEE-------CC--------------------------------------------
T ss_pred CCCCC--HHHHHHHHHHHhhcCCCEEE-------CC--------------------------------------------
Confidence 55553 46788999999999988762 21
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
..+.+|+.++++.+. .++||++.+.+.+++++.++++.+ .+|.|++-... -.++-+.+|.
T Consensus 243 ------~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~-GGit~~~~i~ 302 (388)
T 2nql_A 243 ------VWTEDIAGLEKVSKN-TDVPIAVGEEWRTHWDMRARIERC-RIAIVQPEMGH-KGITNFIRIG 302 (388)
T ss_dssp ------SCTTCHHHHHHHHTS-CCSCEEECTTCCSHHHHHHHHTTS-CCSEECCCHHH-HCHHHHHHHH
T ss_pred ------CChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEecCCC-CCHHHHHHHH
Confidence 123467777777654 589999999999999999999998 89999998777 7776665553
No 101
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.35 E-value=5.3e-06 Score=88.38 Aligned_cols=145 Identities=12% Similarity=0.063 Sum_probs=110.7
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.++...+...+++.+.+.|+.+.+ .||+.|+|++||| +++...+++++|+++++ +++.+...
T Consensus 135 v~~~~~~~~~~~e~~~~~a~~~~~-~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (378)
T 2qdd_A 135 VPINSSISTGTPDQMLGLIAEAAA-QGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDVN 198 (378)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHH-HTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEECT
T ss_pred CceEEEecCCCHHHHHHHHHHHHH-HhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 344444555688888888887653 5999999999986 46778899999999885 56666655
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ .+++.++++.|+ .|+ +| +|.
T Consensus 199 ~~~~--~~~a~~~~~~l~-~~i-~i-------EqP--------------------------------------------- 222 (378)
T 2qdd_A 199 RAWT--PAIAVEVLNSVR-ARD-WI-------EQP--------------------------------------------- 222 (378)
T ss_dssp TCCC--HHHHHHHHTSCC-CCC-EE-------ECC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHhC-CCc-EE-------EcC---------------------------------------------
Confidence 4443 467788888887 777 54 222
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
+. +|+.++++.+. .++||++.+.+.+++++.++++.+ .+|.|++-.+.+-.++-+.+|.
T Consensus 223 ----~~---d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGi~~~~~i~ 281 (378)
T 2qdd_A 223 ----CQ---TLDQCAHVARR-VANPIMLDECLHEFSDHLAAWSRG-ACEGVKIKPNRVGGLTRARQIR 281 (378)
T ss_dssp ----SS---SHHHHHHHHTT-CCSCEEECTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHHH
T ss_pred ----CC---CHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhC-CCCEEEecccccCCHHHHHHHH
Confidence 21 67777777654 589999999999999999999988 8999999998888887666653
No 102
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.34 E-value=1.7e-05 Score=80.79 Aligned_cols=195 Identities=16% Similarity=0.175 Sum_probs=115.7
Q ss_pred eeeecccCch--HHHHHHHHHHHHhcccceEEecc--CCCccceeccc------cccccc--cChHHHHHHHHHHHhh-c
Q psy9514 371 FGVQLCGNNP--YVLTKCTQLLEEQMVVDFVDVNL--GCPIEFIYKQG------SGSGLL--QRANILQSVITCMNEV-S 437 (611)
Q Consensus 371 ~ivQi~g~~p--~~~~~aA~~l~~~~g~D~IELN~--gCP~~~v~~~g------~GsaLl--~r~~~l~eIv~av~~~-~ 437 (611)
++.-+...+| +.+.+.++.+. ..|+|+|||+. +-| . -+| .-.+|. -+.....++++.+++. +
T Consensus 19 ~i~~i~~gdp~~~~~~~~~~~l~-~~GaD~ieig~P~sdp---~-~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~ 93 (268)
T 1qop_A 19 FVPFVTLGDPGIEQSLKIIDTLI-DAGADALELGVPFSDP---L-ADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP 93 (268)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEECCCSCC---T-TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS
T ss_pred EEEEeeCCCCCHHHHHHHHHHHH-HCCCCEEEECCCCCCc---c-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 3444445555 77777777775 46999999964 223 1 011 000011 1456677899999998 7
Q ss_pred CCCEEEEEEccccC-CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhh
Q psy9514 438 SLPITVKTRTGIHK-DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHN 507 (611)
Q Consensus 438 ~~PvtVKiR~g~~~-~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~ 507 (611)
++|+.+-.- ++. ......++++.+.++|++.|+++.-..+ .+..+.+.+++.... ..+
T Consensus 94 ~~Pv~lm~y--~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e----------~~~~~~~~~~~~g~~~i~l~~p~t~~~ 161 (268)
T 1qop_A 94 TIPIGLLMY--ANLVFNNGIDAFYARCEQVGVDSVLVADVPVE----------ESAPFRQAALRHNIAPIFICPPNADDD 161 (268)
T ss_dssp SSCEEEEEC--HHHHHTTCHHHHHHHHHHHTCCEEEETTCCGG----------GCHHHHHHHHHTTCEEECEECTTCCHH
T ss_pred CCCEEEEEc--ccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHH----------HHHHHHHHHHHcCCcEEEEECCCCCHH
Confidence 899766211 110 0012358899999999999999864421 122333333322211 111
Q ss_pred cchhhHhcCCceE---EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 508 FMPKFRDWGASLI---TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 508 ~~~~l~~~G~~~i---tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.+..+.......+ ++.|.|.......+...+.++++.+. .++||+..|||+|++++.+++..| +|+|++|.+++
T Consensus 162 ~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~-~~~pi~vggGI~t~e~~~~~~~ag--AD~vVVGSai~ 238 (268)
T 1qop_A 162 LLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEY-HAAPALQGFGISSPEQVSAAVRAG--AAGAISGSAIV 238 (268)
T ss_dssp HHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHT-TCCCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHH
T ss_pred HHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhc-cCCcEEEECCCCCHHHHHHHHHcC--CCEEEEChHHh
Confidence 2222333333333 33344443222223346788887664 489999999999999999999887 99999998875
Q ss_pred h
Q psy9514 585 I 585 (611)
Q Consensus 585 ~ 585 (611)
.
T Consensus 239 ~ 239 (268)
T 1qop_A 239 K 239 (268)
T ss_dssp H
T ss_pred h
Confidence 3
No 103
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.33 E-value=1.1e-06 Score=87.88 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccC
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTK 533 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~ 533 (611)
.+..++++.++++|+++|+++...... ...
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~--------------------------------------------------~~~ 60 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATH--------------------------------------------------EER 60 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSST--------------------------------------------------TCH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccc--------------------------------------------------cCc
Confidence 356788999999999999887544210 011
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHccc
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEKK 597 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g~ 597 (611)
..+++.++++.+. .++|||.+|+|.++++++++++.| ||+|++|+.++.+|+++.++.+..
T Consensus 61 ~~~~~~i~~i~~~-~~iPvi~~Ggi~~~~~~~~~~~~G--ad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 61 AILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSG--ADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp HHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHHCTHHHHHHHHHH
T ss_pred cccHHHHHHHHHh-CCCCEEEECCcCCHHHHHHHHHcC--CCEEEEChHHHhCcHHHHHHHHHc
Confidence 2356677777665 589999999999999999999997 999999999999999999987653
No 104
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.32 E-value=1.4e-05 Score=85.13 Aligned_cols=145 Identities=8% Similarity=-0.020 Sum_probs=112.0
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNI 455 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~ 455 (611)
.+++.+.+.|+.+.+ .||++|.|++||+. +| ...+++...+++++|+++++ +++.|...-++ +.++
T Consensus 148 ~~~e~~~~~a~~~~~-~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~--~~~~ 215 (382)
T 1rvk_A 148 ATPEDYGRFAETLVK-RGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWY--SRTD 215 (382)
T ss_dssp SSHHHHHHHHHHHHH-HTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTC--CHHH
T ss_pred CCHHHHHHHHHHHHH-CCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCC--CHHH
Confidence 588888888887753 49999999999973 22 34589999999999999885 66776665555 3477
Q ss_pred HHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc
Q psy9514 456 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA 535 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a 535 (611)
+.++++.|++.|+++|. |. ..+.
T Consensus 216 a~~~~~~l~~~~i~~iE-------~P--------------------------------------------------~~~~ 238 (382)
T 1rvk_A 216 ALALGRGLEKLGFDWIE-------EP--------------------------------------------------MDEQ 238 (382)
T ss_dssp HHHHHHHHHTTTCSEEE-------CC--------------------------------------------------SCTT
T ss_pred HHHHHHHHHhcCCCEEe-------CC--------------------------------------------------CChh
Confidence 88999999999998763 21 1234
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCC-HHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILS-YEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s-~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
+|+.++++.+. .++||++.+.+.| ++++.++++.+ .+|.|++--..+--..-+.+|
T Consensus 239 ~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 295 (382)
T 1rvk_A 239 SLSSYKWLSDN-LDIPVVGPESAAGKHWHRAEWIKAG-ACDILRTGVNDVGGITPALKT 295 (382)
T ss_dssp CHHHHHHHHHH-CSSCEEECSSCSSHHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHH
T ss_pred hHHHHHHHHhh-CCCCEEEeCCccCcHHHHHHHHHcC-CCCEEeeCchhcCCHHHHHHH
Confidence 66777777665 4899999999999 99999999998 899999977666555544444
No 105
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.32 E-value=7.8e-06 Score=86.68 Aligned_cols=148 Identities=13% Similarity=0.067 Sum_probs=114.4
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
..++..++.+.+++.+.+.|+.+.+ .||+.|+|++|+ +++...+++++|++++| +++.+..
T Consensus 130 ~v~~~~~i~~~~~~~~~~~a~~~~~-~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 192 (369)
T 2p8b_A 130 EFPVTHVLSIADPENMAEEAASMIQ-KGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDV 192 (369)
T ss_dssp CEECCEEECSCCHHHHHHHHHHHHH-TTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceeeeEEecCCChHHHHHHHHHHHH-cCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 3455567777899999888887753 599999999874 36778899999999885 5666665
Q ss_pred EccccCCchHHH-HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 446 RTGIHKDNNIIH-NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 446 R~g~~~~~~~a~-~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
.-+++ .+++. ++++.|++.|+++|. |.
T Consensus 193 n~~~~--~~~a~~~~~~~l~~~~i~~iE-------qP------------------------------------------- 220 (369)
T 2p8b_A 193 NQGWK--NSANTLTALRSLGHLNIDWIE-------QP------------------------------------------- 220 (369)
T ss_dssp TTTTB--SHHHHHHHHHTSTTSCCSCEE-------CC-------------------------------------------
T ss_pred CCCCC--HHHHHHHHHHHHHhCCCcEEE-------CC-------------------------------------------
Confidence 54553 36788 899999998888653 21
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+|+.++++.+. .++||++.+.+++++++.++++.+ .+|.|++-.+.+-.++-+.++
T Consensus 221 -------~~~~d~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 280 (369)
T 2p8b_A 221 -------VIADDIDAMAHIRSK-TDLPLMIDEGLKSSREMRQIIKLE-AADKVNIKLMKCGGIYPAVKL 280 (369)
T ss_dssp -------BCTTCHHHHHHHHHT-CCSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHH
T ss_pred -------CCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhC-CCCEEEeecchhCCHHHHHHH
Confidence 133467777777655 589999999999999999999998 899999988877777655555
No 106
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.31 E-value=6.9e-06 Score=88.41 Aligned_cols=140 Identities=16% Similarity=0.148 Sum_probs=104.4
Q ss_pred chHHHHHHHHHHHHhcccceEEecc------CCCc-cceeccccccccc-cChHHHHHHHHHHHhhcC--CCEEEEEEcc
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNL------GCPI-EFIYKQGSGSGLL-QRANILQSVITCMNEVSS--LPITVKTRTG 448 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~------gCP~-~~v~~~g~GsaLl-~r~~~l~eIv~av~~~~~--~PvtVKiR~g 448 (611)
+++.+.+.|+.+.+ .||++|.|+. |++. ...+++.||+.+. ++++...++|++|+++++ ++|.+...-+
T Consensus 150 ~~~~~~~~a~~~~~-~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~ 228 (410)
T 2gl5_A 150 TPEEYAEAARAALD-DGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSL 228 (410)
T ss_dssp SHHHHHHHHHHHHH-TTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 88999888887753 5999999997 6510 0123345777764 578999999999999885 5555554333
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTRE 528 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~ 528 (611)
+ +.+++.++++.|++.|+++|. +.
T Consensus 229 ~--~~~~ai~~~~~l~~~~i~~iE-------~P----------------------------------------------- 252 (410)
T 2gl5_A 229 L--GTNSAIQFAKAIEKYRIFLYE-------EP----------------------------------------------- 252 (410)
T ss_dssp S--CHHHHHHHHHHHGGGCEEEEE-------CS-----------------------------------------------
T ss_pred C--CHHHHHHHHHHHHhcCCCeEE-------CC-----------------------------------------------
Confidence 3 347788999999999887653 11
Q ss_pred ccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 529 QRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 529 g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+|+.++++.+. .++||++.+.+.|++++.++++.+ .+|.|++=
T Consensus 253 ---~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 299 (410)
T 2gl5_A 253 ---IHPLNSDNMQKVSRS-TTIPIATGERSYTRWGYRELLEKQ-SIAVAQPD 299 (410)
T ss_dssp ---SCSSCHHHHHHHHHH-CSSCEEECTTCCTTHHHHHHHHTT-CCSEECCC
T ss_pred ---CChhhHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcC-CCCEEecC
Confidence 123466777777665 489999999999999999999988 79999873
No 107
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.28 E-value=1e-05 Score=78.43 Aligned_cols=179 Identities=15% Similarity=0.091 Sum_probs=110.0
Q ss_pred ccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCch
Q psy9514 376 CGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNN 454 (611)
Q Consensus 376 ~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~ 454 (611)
-..+.+...+.++.+.. +++.||+..+. . .. +| .++++.+++.. +.|+.+-+.+. +.+
T Consensus 8 d~~~~~~~~~~~~~~~~--~v~~iev~~~~--~--~~--~g----------~~~i~~l~~~~~~~~i~~~l~~~---di~ 66 (207)
T 3ajx_A 8 DLLSTEAALELAGKVAE--YVDIIELGTPL--I--KA--EG----------LSVITAVKKAHPDKIVFADMKTM---DAG 66 (207)
T ss_dssp CCSCHHHHHHHHHHHGG--GCSEEEECHHH--H--HH--HC----------THHHHHHHHHSTTSEEEEEEEEC---SCH
T ss_pred CCCCHHHHHHHHHHhhc--cCCEEEECcHH--H--Hh--hC----------HHHHHHHHHhCCCCeEEEEEEec---Ccc
Confidence 33467778888877753 78999995432 1 11 12 34677777776 77888744432 212
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh----h------hhcchhhHhcCCceE-Eec
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI----I------HNFMPKFRDWGASLI-TLH 523 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~----~------~~~~~~l~~~G~~~i-tih 523 (611)
..+++.+.++|++.|++|.-.... .+..+.+.+++.... . .+.+..+.+.|++.+ ...
T Consensus 67 --~~~~~~a~~~Gad~v~vh~~~~~~---------~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~ 135 (207)
T 3ajx_A 67 --ELEADIAFKAGADLVTVLGSADDS---------TIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHA 135 (207)
T ss_dssp --HHHHHHHHHTTCSEEEEETTSCHH---------HHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEEC
T ss_pred --HHHHHHHHhCCCCEEEEeccCChH---------HHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEEe
Confidence 246788899999999999865311 122222222211110 0 111234556689999 555
Q ss_pred cccccccccCCccH-HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 524 GRTREQRYTKQADW-DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 524 grtr~g~~~~~a~~-~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
+++.. ..+.... ..++++... ++||+..|||+ ++.+.++++.| +|+|.+||+++..++..+.+
T Consensus 136 ~~~~~--~~g~~~~~~~i~~~~~~--~~pi~v~GGI~-~~~~~~~~~aG--ad~vvvGsaI~~~~dp~~~~ 199 (207)
T 3ajx_A 136 GLDEQ--AKPGFDLNGLLAAGEKA--RVPFSVAGGVK-VATIPAVQKAG--AEVAVAGGAIYGAADPAAAA 199 (207)
T ss_dssp CHHHH--TSTTCCTHHHHHHHHHH--TSCEEEESSCC-GGGHHHHHHTT--CSEEEESHHHHTSSSHHHHH
T ss_pred ccccc--ccCCCchHHHHHHhhCC--CCCEEEECCcC-HHHHHHHHHcC--CCEEEEeeeccCCCCHHHHH
Confidence 55421 1111111 556665443 68999999997 88999999987 99999999999876644433
No 108
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.27 E-value=9.7e-06 Score=86.53 Aligned_cols=146 Identities=10% Similarity=0.007 Sum_probs=115.4
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
..++..++++.+++.+.+.++.+. ..||+.|.|++||. ++.-.+++++|+++++ +++.|..
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~-~~G~~~iKiK~G~~----------------~~~d~~~v~avR~a~g~~~~l~vDa 196 (378)
T 3eez_A 134 PRPIASSVGAKSVEETRAVIDRYR-QRGYVAHSVKIGGD----------------VERDIARIRDVEDIREPGEIVLYDV 196 (378)
T ss_dssp CEEBBCCBCSCCHHHHHHHHHHHH-HTTCCEEEEECCSC----------------HHHHHHHHHHHTTSCCTTCEEEEEC
T ss_pred eEEEEEEecCCCHHHHHHHHHHHH-hCCCCEEEeccCCC----------------HHHHHHHHHHHHHHcCCCceEEEEC
Confidence 456777888899999988888765 35999999998872 5556788999999985 6777776
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
..+++ .+++.++++.|++.|+ +|. |.
T Consensus 197 n~~~~--~~~a~~~~~~l~~~~i-~iE-------qP-------------------------------------------- 222 (378)
T 3eez_A 197 NRGWT--RQQALRVMRATEDLHV-MFE-------QP-------------------------------------------- 222 (378)
T ss_dssp TTCCC--HHHHHHHHHHTGGGTC-CEE-------CC--------------------------------------------
T ss_pred CCCCC--HHHHHHHHHHhccCCe-EEe-------cC--------------------------------------------
Confidence 66664 4678899999998887 652 22
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
+ .+|+.++++.+. .++||++++.+++++++.++++.+ .+|.|++-.+.+-.++-+.+|.
T Consensus 223 -----~---~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~ik~~~~GGit~~~~ia 281 (378)
T 3eez_A 223 -----G---ETLDDIAAIRPL-HSAPVSVDECLVTLQDAARVARDG-LAEVFGIKLNRVGGLTRAARMR 281 (378)
T ss_dssp -----S---SSHHHHHHTGGG-CCCCEEECTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTSHHHHHHHH
T ss_pred -----C---CCHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcC-CCCEEEeCchhcCCHHHHHHHH
Confidence 1 156666665544 589999999999999999999998 8999999999988888777764
No 109
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.26 E-value=1.8e-05 Score=85.05 Aligned_cols=145 Identities=12% Similarity=0.045 Sum_probs=110.7
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccCh-HHHHHHHHHHHhhcC--CCEEEEEEccccCCc
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRA-NILQSVITCMNEVSS--LPITVKTRTGIHKDN 453 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~-~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~ 453 (611)
+.+++.+.+.|+.+.+ .||+.|+|++ || + |+ ++ +...+++++|++++| ++|.+...-++..+.
T Consensus 143 ~~~~~~~~~~a~~~~~-~Gf~~iKik~-sp---v-----G~----~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~ 208 (401)
T 2hzg_A 143 GDTPQETLERARAARR-DGFAAVKFGW-GP---I-----GR----GTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDV 208 (401)
T ss_dssp CSSHHHHHHHHHHHHH-TTCSEEEEES-TT---T-----TS----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCH
T ss_pred CCCHHHHHHHHHHHHH-hCCCeEEEcC-CC---C-----CC----CHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCH
Confidence 5689999888887753 5999999997 67 2 33 45 788899999999884 667776655551034
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccC
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTK 533 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~ 533 (611)
+++.++++.|++.|+++|. |. ..
T Consensus 209 ~~a~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~ 231 (401)
T 2hzg_A 209 EAAAARLPTLDAAGVLWLE-------EP--------------------------------------------------FD 231 (401)
T ss_dssp HHHHTTHHHHHHTTCSEEE-------CC--------------------------------------------------SC
T ss_pred HHHHHHHHHHHhcCCCEEE-------CC--------------------------------------------------CC
Confidence 6788999999999998763 21 12
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
+.+|+.++++.+...++||++.+.+.|++++.++++.+ .+|.|++-...+-.++-+.+|
T Consensus 232 ~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 290 (401)
T 2hzg_A 232 AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYG-RIGFIQIDCGRIGGLGPAKRV 290 (401)
T ss_dssp TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHS-CCSEEEECHHHHTSHHHHHHH
T ss_pred ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCC-CCCEEEeCcchhCCHHHHHHH
Confidence 34677777775513589999999999999999999998 899999988877777665555
No 110
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.26 E-value=2.3e-05 Score=83.14 Aligned_cols=147 Identities=11% Similarity=0.133 Sum_probs=111.3
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEcc
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTG 448 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g 448 (611)
+..-+.+.+++.+.+.|+.+.+..||+.|+|++||+ +++...+++++|+++++ +++.+...-+
T Consensus 134 ~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~ 198 (370)
T 1nu5_A 134 IAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQG 198 (370)
T ss_dssp BCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTTC
T ss_pred eeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 333344568888888888776436999999999885 34567889999999885 6666665544
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTRE 528 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~ 528 (611)
+ +.+++.++++.|++.|+++|. |.
T Consensus 199 ~--~~~~a~~~~~~l~~~~i~~iE-------qP----------------------------------------------- 222 (370)
T 1nu5_A 199 W--DEQTASIWIPRLEEAGVELVE-------QP----------------------------------------------- 222 (370)
T ss_dssp C--CHHHHHHHHHHHHHHTCCEEE-------CC-----------------------------------------------
T ss_pred C--CHHHHHHHHHHHHhcCcceEe-------CC-----------------------------------------------
Confidence 4 346788999999999998763 21
Q ss_pred ccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 529 QRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 529 g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+|+.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--..+-.+.-+.+|
T Consensus 223 ---~~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 282 (370)
T 1nu5_A 223 ---VPRANFGALRRLTEQ-NGVAILADESLSSLSSAFELARDH-AVDAFSLKLCNMGGIANTLKV 282 (370)
T ss_dssp ---SCTTCHHHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSHHHHHHH
T ss_pred ---CCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhC-CCCEEEEchhhcCCHHHHHHH
Confidence 233467777777665 489999999999999999999998 899999987776666555554
No 111
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.23 E-value=1.3e-05 Score=78.21 Aligned_cols=173 Identities=12% Similarity=0.098 Sum_probs=112.8
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
..+++..+.+.+++.+.+.++.+. ..|++.|+|...+|.. .+.++.+.+..+.|+.|..
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~-~~G~~~i~l~~~~~~~------------------~~~i~~i~~~~~~~l~vg~-- 64 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVI-DAGFDAVEIPLNSPQW------------------EQSIPAIVDAYGDKALIGA-- 64 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHH-HHTCCEEEEETTSTTH------------------HHHHHHHHHHHTTTSEEEE--
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHH-HCCCCEEEEeCCChhH------------------HHHHHHHHHhCCCCeEEEe--
Confidence 457888999999999999888875 3589999998766511 2345555555677877743
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC---chhhhhcchhhHhcCCceEEecc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD---NNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~---~~~~~~~~~~l~~~G~~~itihg 524 (611)
|...+ + ..++.+.++|++.|++-.. +...+..+..+ ... .......+....+.|++.+.++.
T Consensus 65 g~~~~-~---~~i~~a~~~Gad~V~~~~~----------~~~~~~~~~~~-g~~~~~g~~t~~e~~~a~~~G~d~v~v~~ 129 (212)
T 2v82_A 65 GTVLK-P---EQVDALARMGCQLIVTPNI----------HSEVIRRAVGY-GMTVCPGCATATEAFTALEAGAQALKIFP 129 (212)
T ss_dssp ECCCS-H---HHHHHHHHTTCCEEECSSC----------CHHHHHHHHHT-TCEEECEECSHHHHHHHHHTTCSEEEETT
T ss_pred ccccC-H---HHHHHHHHcCCCEEEeCCC----------CHHHHHHHHHc-CCCEEeecCCHHHHHHHHHCCCCEEEEec
Confidence 21111 1 3467778899999863221 11222222111 000 00011112344678999998743
Q ss_pred ccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
. ....++.++++.+... ++||++.|||+ ++++.++++.| +|+|++|++++..
T Consensus 130 t-------~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~G--a~gv~vGsai~~~ 182 (212)
T 2v82_A 130 S-------SAFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAG--CAGAGLGSDLYRA 182 (212)
T ss_dssp H-------HHHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHT--CSEEEECTTTCCT
T ss_pred C-------CCCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcC--CCEEEEChHHhCC
Confidence 1 1234688888877654 49999999997 99999999987 9999999998875
No 112
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.22 E-value=1.2e-05 Score=81.91 Aligned_cols=194 Identities=15% Similarity=0.145 Sum_probs=116.0
Q ss_pred eeeecccCch--HHHHHHHHHHHHhcccceEEec--cCCCccceeccc------cccccc--cChHHHHHHHHHHHhh-c
Q psy9514 371 FGVQLCGNNP--YVLTKCTQLLEEQMVVDFVDVN--LGCPIEFIYKQG------SGSGLL--QRANILQSVITCMNEV-S 437 (611)
Q Consensus 371 ~ivQi~g~~p--~~~~~aA~~l~~~~g~D~IELN--~gCP~~~v~~~g------~GsaLl--~r~~~l~eIv~av~~~-~ 437 (611)
++.-+.+.+| +...+.++.+. ..|+|.|||. ++=| + -+| .-.+|. -+.+.+.++++.+++. .
T Consensus 20 li~yi~aGdP~~~~~~~~~~~l~-~~GaD~iElgiPfSDP---~-aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~ 94 (267)
T 3vnd_A 20 FVPFVTIGDPSPELSLKIIQTLV-DNGADALELGFPFSDP---L-ADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP 94 (267)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEECCCSCC---T-TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEECCCCCCC---C-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 4444555555 77778887775 4699999997 4444 1 122 111111 2456778899999987 7
Q ss_pred CCCEEEEEEccccCC-chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhh
Q psy9514 438 SLPITVKTRTGIHKD-NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHN 507 (611)
Q Consensus 438 ~~PvtVKiR~g~~~~-~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~ 507 (611)
.+|+.+-.-.. .- ..-..++++.+.++|++.|.++.=..+. ..++...+++.... ..+
T Consensus 95 ~~Pivlm~Y~n--pv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee----------~~~~~~~~~~~gl~~i~liaP~t~~e 162 (267)
T 3vnd_A 95 DMPIGLLLYAN--LVFANGIDEFYTKAQAAGVDSVLIADVPVEE----------SAPFSKAAKAHGIAPIFIAPPNADAD 162 (267)
T ss_dssp TCCEEEEECHH--HHHHHCHHHHHHHHHHHTCCEEEETTSCGGG----------CHHHHHHHHHTTCEEECEECTTCCHH
T ss_pred CCCEEEEecCc--HHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh----------HHHHHHHHHHcCCeEEEEECCCCCHH
Confidence 89977642111 00 0113689999999999999987543221 12222222222111 112
Q ss_pred cchhhHhcCCceE---EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 508 FMPKFRDWGASLI---TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 508 ~~~~l~~~G~~~i---tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.+..+.+.+...+ ++.|.|....-......++++++.+ ..++||+..|||+|++++.+.+..| +|+|+||.+++
T Consensus 163 ri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~-~~~~pv~vGfGI~~~e~~~~~~~~g--ADgvVVGSaiv 239 (267)
T 3vnd_A 163 TLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAE-FNAPPPLLGFGIAEPEQVRAAIKAG--AAGAISGSAVV 239 (267)
T ss_dssp HHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHT-TTCCCEEECSSCCSHHHHHHHHHTT--CSEEEECHHHH
T ss_pred HHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHH-hcCCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHH
Confidence 3334444443344 4466555432223334577777755 4589999999999999999899887 99999998765
No 113
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=5.9e-07 Score=74.50 Aligned_cols=54 Identities=26% Similarity=0.714 Sum_probs=45.3
Q ss_pred CcccCCcccccCCCCCCCCCCCCCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCccc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGEKCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGSSH 137 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~h 137 (611)
....+|..|+++ .|.+|++|+|+||+.. .+ ...|.+|..+|.|+ |..|+|..+.
T Consensus 8 ~k~~~C~~fl~G----~C~~G~~C~fsH~~~~---~~----~~~C~~f~~~G~C~-~~~C~f~H~~ 61 (77)
T 2d9n_A 8 EKTVVCKHWLRG----LCKKGDQCEFLHEYDM---TK----MPECYFYSKFGECS-NKECPFLHID 61 (77)
T ss_dssp CTTSBCHHHHTT----CCSCTTSSSSBCSCCT---TT----SCBCHHHHHTCCCC-CSSCSSBCCC
T ss_pred CcceeCHhHccC----cCCCCCCCCCcccccc---Cc----CCCCcccCCCCccC-CCCeeccCCC
Confidence 467899999996 5999999999999763 11 34799999999999 9999999554
No 114
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.18 E-value=2.8e-05 Score=82.46 Aligned_cols=145 Identities=6% Similarity=-0.071 Sum_probs=110.1
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
..++...+.+.+++.+.+.|+.+. ..||+.|+|++|+ +++...+++++|+++++ +++.+..
T Consensus 135 ~vp~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 135 RLPLISSIYVGEPEDMRARVAKYR-AKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHH-TTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHH-HhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 345556666778999988888875 4699999999874 36778899999999885 5565554
Q ss_pred EccccCCchHHHHHHHHH-HHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 446 RTGIHKDNNIIHNFMPKF-RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l-~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
.-++ +.+++.++++.| ++.|+ +|. |.
T Consensus 198 n~~~--~~~~a~~~~~~l~~~~~i-~iE-------~P------------------------------------------- 224 (371)
T 2ps2_A 198 NGKL--SVETALRLLRLLPHGLDF-ALE-------AP------------------------------------------- 224 (371)
T ss_dssp TTBC--CHHHHHHHHHHSCTTCCC-EEE-------CC-------------------------------------------
T ss_pred CCCc--CHHHHHHHHHHHHhhcCC-cCc-------CC-------------------------------------------
Confidence 4444 346788999999 88887 652 21
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.. +|+.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+.+-...-+.+|
T Consensus 225 ------~~---~~~~~~~l~~~-~~iPI~~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 282 (371)
T 2ps2_A 225 ------CA---TWRECISLRRK-TDIPIIYDELATNEMSIVKILADD-AAEGIDLKISKAGGLTRGRRQ 282 (371)
T ss_dssp ------BS---SHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHHT-CCSEEEEEHHHHTSHHHHHHH
T ss_pred ------cC---CHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhC-CCCEEEechhhcCCHHHHHHH
Confidence 11 56667776554 589999999999999999999998 899999987777666555544
No 115
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.18 E-value=4.3e-06 Score=82.83 Aligned_cols=89 Identities=17% Similarity=0.216 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
...++++.++++|+++|+++...... +...
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~--------------------------------------------------~~~~ 63 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAP--------------------------------------------------EGRA 63 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCT--------------------------------------------------TTHH
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccc--------------------------------------------------cCCc
Confidence 56788999999999999998644211 0111
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
..++.++++.+. .++||+++|+|.++++++++++.| +|+|+||+.++.+|+++.++.+.
T Consensus 64 ~~~~~i~~i~~~-~~ipvi~~g~i~~~~~~~~~~~~G--ad~V~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 64 TFIDSVKRVAEA-VSIPVLVGGGVRSLEDATTLFRAG--ADKVSVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp HHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHHCTHHHHHHHHH
T ss_pred ccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhhCcHHHHHHHHH
Confidence 245667777665 489999999999999999999987 99999999999999999887665
No 116
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.18 E-value=1.1e-05 Score=86.25 Aligned_cols=142 Identities=6% Similarity=0.056 Sum_probs=105.9
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCcc-cee-ccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCC
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIE-FIY-KQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKD 452 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~-~v~-~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~ 452 (611)
+.+++.+.+.|+.+.+ .||++|.|+.||+.. ..+ ...||++..++++...++|++|+++++ ++|.+...-++ +
T Consensus 135 ~~~~~~~~~~a~~~~~-~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~--~ 211 (392)
T 2poz_A 135 ADTPDEFARAVERPLK-EGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGL--T 211 (392)
T ss_dssp CCSHHHHHHHTHHHHH-TTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS--C
T ss_pred CCCHHHHHHHHHHHHH-cCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCC--C
Confidence 4588888888887753 599999999998531 001 224677777889999999999999885 45555443333 3
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+++.++++.|++.|+++|. +. .
T Consensus 212 ~~~a~~~~~~l~~~~i~~iE-------~P--------------------------------------------------~ 234 (392)
T 2poz_A 212 TDETIRFCRKIGELDICFVE-------EP--------------------------------------------------C 234 (392)
T ss_dssp HHHHHHHHHHHGGGCEEEEE-------CC--------------------------------------------------S
T ss_pred HHHHHHHHHHHHhcCCCEEE-------CC--------------------------------------------------C
Confidence 47788999999998887653 11 1
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+.+|+.++++.+. .++||++.+.+.|++++.++++.+ .+|.|++-
T Consensus 235 ~~~~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 280 (392)
T 2poz_A 235 DPFDNGALKVISEQ-IPLPIAVGERVYTRFGFRKIFELQ-ACGIIQPD 280 (392)
T ss_dssp CTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHTTT-CCSEECCC
T ss_pred CcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcC-CCCEEecC
Confidence 23466777777665 489999999999999999999987 79999873
No 117
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.17 E-value=4.4e-05 Score=75.38 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=113.4
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEecc--CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNL--GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~--gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR 446 (611)
..+...+.+.++..+.+.++.+. ..|+|.|+|-. |.=..+. +...++++.+++.++.|+.+-+-
T Consensus 11 ~~i~p~i~a~d~~~~~~~i~~~~-~~G~d~i~l~~~dg~f~~~~-------------~~~~~~i~~l~~~~~~~~~v~l~ 76 (230)
T 1rpx_A 11 IIVSPSILSANFSKLGEQVKAIE-QAGCDWIHVDVMDGRFVPNI-------------TIGPLVVDSLRPITDLPLDVHLM 76 (230)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHH-HTTCCCEEEEEEBSSSSSCB-------------CCCHHHHHHHGGGCCSCEEEEEE
T ss_pred eEEEEEeecCCHHHHHHHHHHHH-HCCCCEEEEeeccCCccccc-------------ccCHHHHHHHHhccCCcEEEEEE
Confidence 34667778888888877777765 35899888853 2110111 11146777788777778777654
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEcc--ccccccccCcChhHHHHHhhh----cccCchh-hhhcchhhHhcCCce
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGR--TREQRYTKQADWDYIEKCAQL----CSRDNNI-IHNFMPKFRDWGASL 519 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR--~r~qr~~~~adw~~i~~~~~~----~~~~~~~-~~~~~~~l~~~G~~~ 519 (611)
+. + ..+.++.+.++|++.|++|+- ..... ...+..+... ....+.. ..+....+ ..++++
T Consensus 77 vn--d----~~~~v~~~~~~Gad~v~vh~~~~~~~~~------~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~-~~~~d~ 143 (230)
T 1rpx_A 77 IV--E----PDQRVPDFIKAGADIVSVHCEQSSTIHL------HRTINQIKSLGAKAGVVLNPGTPLTAIEYV-LDAVDL 143 (230)
T ss_dssp SS--S----HHHHHHHHHHTTCSEEEEECSTTTCSCH------HHHHHHHHHTTSEEEEEECTTCCGGGGTTT-TTTCSE
T ss_pred ec--C----HHHHHHHHHHcCCCEEEEEecCccchhH------HHHHHHHHHcCCcEEEEeCCCCCHHHHHHH-HhhCCE
Confidence 32 2 236777788899999999997 42210 1222222211 0000100 01111222 246888
Q ss_pred EEecccccc--ccccCCccHHHHHHHHhhCC----CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 520 ITLHGRTRE--QRYTKQADWDYIEKCAQLCS----PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 520 itihgrtr~--g~~~~~a~~~~i~~~~k~~~----~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
|.+.+...- +.......++.++++.+... ++||+..|||+ ++.+.++++.| +|+|.+|+++...++.-+.+
T Consensus 144 vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aG--ad~vvvgSaI~~a~dp~~a~ 220 (230)
T 1rpx_A 144 VLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAG--ANALVAGSAVFGAPDYAEAI 220 (230)
T ss_dssp EEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHT--CCEEEESHHHHTSSCHHHHH
T ss_pred EEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcC--CCEEEEChhhhCCCCHHHHH
Confidence 844333211 11011122344454443322 78999999997 89999988887 99999999999877654443
No 118
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.15 E-value=1.6e-05 Score=81.23 Aligned_cols=192 Identities=12% Similarity=0.127 Sum_probs=109.8
Q ss_pred chHHHHHHHHHHHHhcccceEEecc--CCCccc--eecccccccccc--ChHHHHHHHHHHHhh-cCCCEEEEEEccccC
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNL--GCPIEF--IYKQGSGSGLLQ--RANILQSVITCMNEV-SSLPITVKTRTGIHK 451 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~--gCP~~~--v~~~g~GsaLl~--r~~~l~eIv~av~~~-~~~PvtVKiR~g~~~ 451 (611)
+.+...++++.+. ..|+|.|||.. +=|.-- +...-.--+|.+ +.+.+.++++.+++. ..+|+.+-.-.+.-
T Consensus 32 ~~~~~~~~~~~l~-~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v- 109 (271)
T 3nav_A 32 NPEQSLAIMQTLI-DAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLV- 109 (271)
T ss_dssp CHHHHHHHHHHHH-HTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHH-
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHH-
Confidence 3466777777765 36999999964 334100 111111112222 455778899999987 78998875221100
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcCCceE--
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWGASLI-- 520 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G~~~i-- 520 (611)
...-..++++.+.++|++.+.+..-..+. +.++...+++.... ..+.+..+.+.+...+
T Consensus 110 ~~~g~~~f~~~~~~aGvdGvIipDlp~ee----------~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~ 179 (271)
T 3nav_A 110 YARGIDDFYQRCQKAGVDSVLIADVPTNE----------SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYL 179 (271)
T ss_dssp HHTCHHHHHHHHHHHTCCEEEETTSCGGG----------CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred HHHhHHHHHHHHHHCCCCEEEECCCCHHH----------HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEE
Confidence 00124679999999999998875433221 12222222222111 1123344444554444
Q ss_pred -EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 521 -TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 521 -tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
++.|.|...........++++++.+ ..++||+..+||.|++++.+.+..| +|+|+||.++..
T Consensus 180 vs~~GvTG~~~~~~~~~~~~v~~vr~-~~~~Pv~vGfGIst~e~~~~~~~~g--ADgvIVGSAiv~ 242 (271)
T 3nav_A 180 LSRAGVTGAETKANMPVHALLERLQQ-FDAPPALLGFGISEPAQVKQAIEAG--AAGAISGSAVVK 242 (271)
T ss_dssp CCCC--------CCHHHHHHHHHHHH-TTCCCEEECSSCCSHHHHHHHHHTT--CSEEEESHHHHH
T ss_pred EeccCCCCcccCCchhHHHHHHHHHH-hcCCCEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHH
Confidence 2345444322122223466777655 4589999999999999999899987 999999988763
No 119
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.14 E-value=5.9e-06 Score=82.18 Aligned_cols=88 Identities=15% Similarity=0.100 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
+..++++.++++|+++|+++...... ....
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~--------------------------------------------------~~~~ 61 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAF--------------------------------------------------GRGS 61 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHT--------------------------------------------------TSCC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccc--------------------------------------------------cCCC
Confidence 45688899999999999998643211 1112
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
.. ..++++.+. .++||+.+|+|.++++++++++.| ||.|++|++++.+|+++.++.+.
T Consensus 62 ~~-~~i~~i~~~-~~ipv~v~ggi~~~~~~~~~l~~G--ad~V~lg~~~l~~p~~~~~~~~~ 119 (244)
T 2y88_A 62 NH-ELLAEVVGK-LDVQVELSGGIRDDESLAAALATG--CARVNVGTAALENPQWCARVIGE 119 (244)
T ss_dssp CH-HHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHHCHHHHHHHHHH
T ss_pred hH-HHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHcC--CCEEEECchHhhChHHHHHHHHH
Confidence 23 677777665 489999999999999999999987 99999999999999998887653
No 120
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.14 E-value=1.5e-05 Score=82.34 Aligned_cols=153 Identities=8% Similarity=0.086 Sum_probs=107.6
Q ss_pred ceeeec---ccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEE
Q psy9514 370 LFGVQL---CGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTR 446 (611)
Q Consensus 370 ~~ivQi---~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR 446 (611)
|+++++ +|.++..+.+.++.+. .+|+.+|.|.-++..+ ++....|..|......+.+|..++....+.++.|.-|
T Consensus 80 PviaD~d~Gyg~~~~~~~~~v~~l~-~aGa~gv~iEd~~~~k-~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aR 157 (295)
T 1xg4_A 80 PLLVDADIGFGSSAFNVARTVKSMI-KAGAAGLHIEDQVGAK-RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMAR 157 (295)
T ss_dssp CEEEECTTCSSSSHHHHHHHHHHHH-HHTCSEEEEECBCSSC-CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEE
T ss_pred CEEecCCcccCCCHHHHHHHHHHHH-HcCCeEEEECCCCCCc-ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEe
Confidence 445555 6778888889888887 4799999999988311 3333335567766677777777666666789999999
Q ss_pred ccc--cCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 447 TGI--HKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 447 ~g~--~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
+.. ....+.+++-+++++++|+++|.+++..
T Consensus 158 tda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~~----------------------------------------------- 190 (295)
T 1xg4_A 158 TDALAVEGLDAAIERAQAYVEAGAEMLFPEAIT----------------------------------------------- 190 (295)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHTTCSEEEETTCC-----------------------------------------------
T ss_pred cHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCCC-----------------------------------------------
Confidence 752 2234667888888999999999988753
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCC--CH-HHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDIL--SY-EDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~--s~-eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
+++.++++.+.. ++|+++|...+ ++ -.+.++-+.| ++.|++|.+++.
T Consensus 191 -----------~~~~~~~i~~~~-~iP~~~N~~~~g~~p~~~~~eL~~~G--~~~v~~~~~~~~ 240 (295)
T 1xg4_A 191 -----------ELAMYRQFADAV-QVPILANITEFGATPLFTTDELRSAH--VAMALYPLSAFR 240 (295)
T ss_dssp -----------SHHHHHHHHHHH-CSCBEEECCSSSSSCCCCHHHHHHTT--CSEEEESSHHHH
T ss_pred -----------CHHHHHHHHHHc-CCCEEEEecccCCCCCCCHHHHHHcC--CCEEEEChHHHH
Confidence 234555555554 78999987652 22 2344555666 999999988763
No 121
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.13 E-value=6.3e-05 Score=79.61 Aligned_cols=148 Identities=12% Similarity=0.087 Sum_probs=111.5
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.++...+.+.+++.+.+.|+.+.+ .||+.|.|++||+ +++...+++++|+++++ +++.+...
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~-~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan 193 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLK-QGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDAN 193 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHH-HTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHH-cCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 445556677789988888777653 5999999998873 36778899999999885 56666655
Q ss_pred ccccCCchHHHHHHHHHHH--cCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 447 TGIHKDNNIIHNFMPKFRD--WGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~--aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
-++ +.+++.++++.|++ .|+++|. |.
T Consensus 194 ~~~--~~~~a~~~~~~l~~~~~~i~~iE-------qP------------------------------------------- 221 (366)
T 1tkk_A 194 QGW--RPKEAVTAIRKMEDAGLGIELVE-------QP------------------------------------------- 221 (366)
T ss_dssp TCS--CHHHHHHHHHHHHHTTCCEEEEE-------CC-------------------------------------------
T ss_pred CCC--CHHHHHHHHHHHhhcCCCceEEE-------CC-------------------------------------------
Confidence 444 34778899999999 8877652 21
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+|+.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--..+-.+.-+.+|
T Consensus 222 -------~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 281 (366)
T 1tkk_A 222 -------VHKDDLAGLKKVTDA-TDTPIMADESVFTPRQAFEVLQTR-SADLINIKLMKAGGISGAEKI 281 (366)
T ss_dssp -------SCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHH
T ss_pred -------CCcccHHHHHHHHhh-CCCCEEEcCCCCCHHHHHHHHHhC-CCCEEEeehhhhcCHHHHHHH
Confidence 233467777777665 489999999999999999999988 799999977766666544444
No 122
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.13 E-value=3.1e-05 Score=82.90 Aligned_cols=140 Identities=6% Similarity=0.018 Sum_probs=107.8
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCch
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNN 454 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~ 454 (611)
+.+++.+.+.|+.+. ..||++|+|+.|+. .+++..++|++|+++++ ++|.|...-+++ .+
T Consensus 147 ~~~~~~~~~~a~~~~-~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~--~~ 208 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFY-GKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPED--LD 208 (391)
T ss_dssp CCCHHHHHHHHHHHH-HTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSC--HH
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC--HH
Confidence 568999988888875 35999999997731 15888999999999884 778877665553 47
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++.++++.|++.|+++|. |. ..+
T Consensus 209 ~a~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~ 231 (391)
T 2qgy_A 209 QTKSFLKEVSSFNPYWIE-------EP--------------------------------------------------VDG 231 (391)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CS--------------------------------------------------SCT
T ss_pred HHHHHHHHHHhcCCCeEe-------CC--------------------------------------------------CCh
Confidence 789999999999998763 21 123
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+|+.++++.+. .++||++.+.+.+++++.++++.+ .+|.|++-...+-.+.-+.+|
T Consensus 232 ~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 288 (391)
T 2qgy_A 232 ENISLLTEIKNT-FNMKVVTGEKQSGLVHFRELISRN-AADIFNPDISGMGGLIDIIEI 288 (391)
T ss_dssp TCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCBTTTSSCHHHHHHH
T ss_pred hhHHHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcC-CCCEEEECcchhCCHHHHHHH
Confidence 466777777665 489999999999999999999998 899999976655555544444
No 123
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.12 E-value=4e-05 Score=82.07 Aligned_cols=148 Identities=7% Similarity=-0.006 Sum_probs=111.2
Q ss_pred cceeeec-c-cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEE
Q psy9514 369 NLFGVQL-C-GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVK 444 (611)
Q Consensus 369 ~~~ivQi-~-g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVK 444 (611)
.++...+ . +.+++.+.+.++.+.+ .||+.|.|+.|| +++...+++++|+++++ +++.|.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~-~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vD 201 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVE-QGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVD 201 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHH-TTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHH-CCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 4555565 4 6789999888887653 599999999887 35677889999999985 566666
Q ss_pred EEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 445 TRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 445 iR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
..-+++ .+++.++++.|++.|+++|. |.
T Consensus 202 an~~~~--~~~A~~~~~~l~~~~i~~iE-------qP------------------------------------------- 229 (389)
T 3ozy_A 202 ANQSLG--RHDALAMLRILDEAGCYWFE-------EP------------------------------------------- 229 (389)
T ss_dssp CTTCCC--HHHHHHHHHHHHHTTCSEEE-------SC-------------------------------------------
T ss_pred CCCCcC--HHHHHHHHHHHHhcCCCEEE-------CC-------------------------------------------
Confidence 555554 47789999999999998873 21
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+...++||++.+.+++++++.++++.+ .+|.|++--+.+-...-+.+|
T Consensus 230 -------~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~-~~d~v~ik~~~~GGit~~~~i 290 (389)
T 3ozy_A 230 -------LSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRND-AIDVLQADASRAGGITEALAI 290 (389)
T ss_dssp -------SCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTT-CCSEECCCTTTSSCHHHHHHH
T ss_pred -------CCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeCccccCCHHHHHHH
Confidence 1234667777776134689999999999999999999988 899999976655444433333
No 124
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.11 E-value=6.5e-06 Score=81.99 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
+..++++.++++|+++|+++...... ....
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~--------------------------------------------------~~~~ 62 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAF--------------------------------------------------GTGD 62 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHH--------------------------------------------------TSCC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhh--------------------------------------------------cCCC
Confidence 45678899999999999998643210 1122
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
.+ ..++++.+. .++||+.+|+|.++++++++++.| ||.|++|+.++.+|+++.++.+.
T Consensus 63 ~~-~~i~~i~~~-~~ipv~v~ggI~~~~~~~~~l~~G--ad~V~lg~~~l~~p~~~~~~~~~ 120 (244)
T 1vzw_A 63 NR-ALIAEVAQA-MDIKVELSGGIRDDDTLAAALATG--CTRVNLGTAALETPEWVAKVIAE 120 (244)
T ss_dssp CH-HHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHHCHHHHHHHHHH
T ss_pred hH-HHHHHHHHh-cCCcEEEECCcCCHHHHHHHHHcC--CCEEEECchHhhCHHHHHHHHHH
Confidence 34 667777665 489999999999999999999987 99999999999999998887653
No 125
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.09 E-value=3.6e-05 Score=82.42 Aligned_cols=128 Identities=11% Similarity=0.083 Sum_probs=99.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.+.+.|+.+. ..||++|+|+.|.+ ++++..++|++|+++++ ++|.+...-++ +.+++
T Consensus 162 ~~e~~~~~a~~~~-~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~avg~d~~l~vDan~~~--~~~~a 223 (393)
T 2og9_A 162 PIDQLMVNASASI-ERGIGGIKLKVGQP---------------DGALDIARVTAVRKHLGDAVPLMVDANQQW--DRPTA 223 (393)
T ss_dssp CHHHHHHHHHHHH-HTTCCCEEEECCCS---------------CHHHHHHHHHHHHHHHCTTSCEEEECTTCC--CHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECCCCC--CHHHH
Confidence 8898988888875 36999999987642 47888999999999885 66766644444 34778
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+++|. |. ..+.+
T Consensus 224 ~~~~~~l~~~~i~~iE-------~P--------------------------------------------------~~~~~ 246 (393)
T 2og9_A 224 QRMCRIFEPFNLVWIE-------EP--------------------------------------------------LDAYD 246 (393)
T ss_dssp HHHHHHHGGGCCSCEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHHhhCCCEEE-------CC--------------------------------------------------CCccc
Confidence 8999999999988763 21 12346
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHh
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGA 583 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRga 583 (611)
++..+++.+. .++||++.+.+.+++++.++++.+ .+|.|++--.-
T Consensus 247 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~ 291 (393)
T 2og9_A 247 HEGHAALALQ-FDTPIATGEMLTSAAEHGDLIRHR-AADYLMPDAPR 291 (393)
T ss_dssp HHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCHHH
T ss_pred HHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHCC-CCCEEeeCccc
Confidence 6777777665 489999999999999999999998 89999985443
No 126
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.09 E-value=3.4e-05 Score=77.99 Aligned_cols=145 Identities=15% Similarity=0.116 Sum_probs=93.3
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI--- 504 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~--- 504 (611)
+.++.+++.+++||.+|-- .-+... +..+..+|+|+|++...... . .+.++....+.....
T Consensus 96 ~~l~~i~~~v~lPvl~kdf------I~d~~q-i~~a~~~GAD~VlL~~~~l~-~--------~l~~l~~~a~~lGl~~lv 159 (254)
T 1vc4_A 96 LDLKRVREAVDLPLLRKDF------VVDPFM-LEEARAFGASAALLIVALLG-E--------LTGAYLEEARRLGLEALV 159 (254)
T ss_dssp HHHHHHHHHCCSCEEEESC------CCSHHH-HHHHHHTTCSEEEEEHHHHG-G--------GHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhcCCCEEECCc------CCCHHH-HHHHHHcCCCEEEECccchH-H--------HHHHHHHHHHHCCCeEEE
Confidence 3456677778999876621 111122 34577899999999776432 1 122222211111111
Q ss_pred -hh--hcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC----CCcEEEecCCCCHHHHHHHHHcCCCccEE
Q psy9514 505 -IH--NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS----PAPLYGNGDILSYEDYTESLKKSPSISGV 577 (611)
Q Consensus 505 -~~--~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~----~iPVIgnGgI~s~eda~~~l~~G~~aD~V 577 (611)
.+ .-+....+.|++.+-++.|.-. +-..+++.+.++++... ++|+|+.|||+|++|+.+++. | +|+|
T Consensus 160 ev~~~~E~~~a~~~gad~IGvn~~~l~---~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-G--a~gv 233 (254)
T 1vc4_A 160 EVHTERELEIALEAGAEVLGINNRDLA---TLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-L--FDAV 233 (254)
T ss_dssp EECSHHHHHHHHHHTCSEEEEESBCTT---TCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-T--CSEE
T ss_pred EECCHHHHHHHHHcCCCEEEEccccCc---CCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-C--CCEE
Confidence 01 1123566778888877665432 22446666666655443 689999999999999999999 8 9999
Q ss_pred EEcHHhhhCCchHHHHH
Q psy9514 578 MIGRGALIKPWIFQEIK 594 (611)
Q Consensus 578 mIGRgaL~dP~lf~ei~ 594 (611)
.||++++..++.-..++
T Consensus 234 lVGsAl~~~~d~~~~~~ 250 (254)
T 1vc4_A 234 LIGTSLMRAPDLEAALR 250 (254)
T ss_dssp EECHHHHTSSCHHHHHH
T ss_pred EEeHHHcCCCCHHHHHH
Confidence 99999999988776664
No 127
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.08 E-value=4.6e-05 Score=82.78 Aligned_cols=150 Identities=6% Similarity=0.049 Sum_probs=108.4
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceecccccc-ccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCch
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGS-GLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNN 454 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gs-aLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~ 454 (611)
.+++.+++.|+.+.+ .||+.|-|+.|+|.... .|. ....+++...+++++||+++|. +|.|...-++ +.+
T Consensus 145 ~~~e~~~~~a~~~~~-~Gf~~iKlk~g~~~~~~----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~--t~~ 217 (433)
T 3rcy_A 145 TSADMAAESAADCVA-RGYTAVKFDPAGPYTLR----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQF--TTA 217 (433)
T ss_dssp TCHHHHHHHHHHHHH-TTCSEEEECCSCCCBTT----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCB--CHH
T ss_pred CCHHHHHHHHHHHHH-cCCCEEEEcCCCCcccc----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCC--CHH
Confidence 688888888877653 59999999999984321 222 2234577888999999999864 4544433333 457
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++..+++.|++.|+.+|. |. ..+
T Consensus 218 ~A~~~~~~Le~~~i~~iE-------eP--------------------------------------------------~~~ 240 (433)
T 3rcy_A 218 GAIRLGQAIEPYSPLWYE-------EP--------------------------------------------------VPP 240 (433)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CC--------------------------------------------------SCT
T ss_pred HHHHHHHHhhhcCCCEEE-------CC--------------------------------------------------CCh
Confidence 889999999999988764 11 223
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+++.++++.+. .++||++.+.++|++++.++++.+ .+|.|++--+-+-...-+.+|
T Consensus 241 ~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~g-~~D~v~~d~~~~GGit~~~ki 297 (433)
T 3rcy_A 241 DNVGAMAQVARA-VRIPVATGERLTTKAEFAPVLREG-AAAILQPALGRAGGIWEMKKV 297 (433)
T ss_dssp TCHHHHHHHHHH-SSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCHHHHTHHHHHHHH
T ss_pred hhHHHHHHHHhc-cCCCEEecCCCCCHHHHHHHHHcC-CCCEEEeCchhcCCHHHHHHH
Confidence 466777777665 589999999999999999999998 799999875554443333333
No 128
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.07 E-value=3.1e-05 Score=83.04 Aligned_cols=139 Identities=13% Similarity=0.061 Sum_probs=101.1
Q ss_pred chHHHHHHHHHHHHhcccceEEecc------CCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEcccc
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNL------GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIH 450 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~------gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~ 450 (611)
+++.+.+.|+.+.+ .||++|.|+. |++.. ....|....++++...++|++|++++| ++|.+...-++
T Consensus 146 ~~e~~~~~a~~~~~-~Gf~~vKik~~~~~~~G~~~~---s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~- 220 (403)
T 2ox4_A 146 RKEEYAEEALKAVA-EGYDAVKVDVLAHDRNGSREG---VFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHT- 220 (403)
T ss_dssp SHHHHHHHHHHHHH-TTCSEEEECCSSSCTTSCCTT---CCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS-
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEeccccCCcccccc---CcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCC-
Confidence 88989888887753 5999999996 55311 111233334577889999999999885 55555543333
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccc
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQR 530 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~ 530 (611)
+.+++.++++.|++.|+++|. +.
T Consensus 221 -~~~~ai~~~~~l~~~~i~~iE-------~P------------------------------------------------- 243 (403)
T 2ox4_A 221 -DLVSAIQFAKAIEEFNIFFYE-------EI------------------------------------------------- 243 (403)
T ss_dssp -CHHHHHHHHHHHGGGCEEEEE-------CC-------------------------------------------------
T ss_pred -CHHHHHHHHHHHHhhCCCEEe-------CC-------------------------------------------------
Confidence 347788999999999887653 11
Q ss_pred ccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 531 YTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 531 ~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
..+.+|+.++++.+. .++||++.+.+.|++++.++++.+ .+|.|++--.
T Consensus 244 -~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~ 292 (403)
T 2ox4_A 244 -NTPLNPRLLKEAKKK-IDIPLASGERIYSRWGFLPFLEDR-SIDVIQPDLG 292 (403)
T ss_dssp -SCTTSTHHHHHHHHT-CCSCEEECTTCCHHHHHHHHHHTT-CCSEECCCHH
T ss_pred -CChhhHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcC-CCCEEecCcc
Confidence 123456667776655 589999999999999999999998 7999998533
No 129
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.06 E-value=4.1e-05 Score=82.42 Aligned_cols=136 Identities=13% Similarity=0.149 Sum_probs=100.8
Q ss_pred chHHHHHHHHHHHHhcccceEEecc----CCCccceeccccccccc--cChHHHHHHHHHHHhhcCCCEEEEEEccccCC
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNL----GCPIEFIYKQGSGSGLL--QRANILQSVITCMNEVSSLPITVKTRTGIHKD 452 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~----gCP~~~v~~~g~GsaLl--~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~ 452 (611)
+++.+.+.|+.+.+ .||++|.|+. |.... . ||+.+. ++++...++|++|++++|..+.+.+.....-+
T Consensus 149 ~~~~~~~~a~~~~~-~Gf~~vKik~~~~~G~~~~---~--~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~ 222 (410)
T 2qq6_A 149 SNEEYIAVAREAVE-RGFDAIKLDVDDITGPLHR---D--FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFD 222 (410)
T ss_dssp HHHHHHHHHHHHHH-TTCSEEEEECCCSSSTTCS---C--SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCC
T ss_pred CHHHHHHHHHHHHH-cCCCEEEeeccccCCcccC---C--cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 78888888877653 5999999998 55321 1 566665 57889999999999988644433333322224
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+++.++++.|++.|+++|. + ..
T Consensus 223 ~~~a~~~~~~l~~~~i~~iE-------e--------------------------------------------------P~ 245 (410)
T 2qq6_A 223 IPSSIRFARAMEPFGLLWLE-------E--------------------------------------------------PT 245 (410)
T ss_dssp HHHHHHHHHHHGGGCCSEEE-------C--------------------------------------------------CS
T ss_pred HHHHHHHHHHHhhcCCCeEE-------C--------------------------------------------------CC
Confidence 57788999999999988754 1 11
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.+.+|+..+++.+. .++||++.+.+.+++++.++++.+ .+|.|++
T Consensus 246 ~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~i 290 (410)
T 2qq6_A 246 PPENLDALAEVRRS-TSTPICAGENVYTRFDFRELFAKR-AVDYVMP 290 (410)
T ss_dssp CTTCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECC
T ss_pred ChhhHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEec
Confidence 23456777776654 589999999999999999999988 7999988
No 130
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=98.06 E-value=9.4e-07 Score=72.37 Aligned_cols=52 Identities=25% Similarity=0.705 Sum_probs=43.5
Q ss_pred CcccCCcccccCCCCCCCCCCCCCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGEKCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGS 135 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~ 135 (611)
....+|..|+++ .|.+|++|+|+||+.. . -...|.+|..+|.|++ ..|+|..
T Consensus 14 ~k~~vCk~fl~G----~C~~G~~C~fsH~~~~---~----~~~~C~~f~~~G~C~~-~~C~y~H 65 (72)
T 2rhk_C 14 EKTVVCKHWLRG----LCKKGDQCEFLHEYDM---T----KMSECYFYSKFGECSN-KECPFLH 65 (72)
T ss_dssp CCCSBCHHHHTT----CCCCGGGSSSBCSCCT---T----SCCBCHHHHHHSCCSB-TTCCSBC
T ss_pred CcCeeCHHHhcC----CCCCCCCCCCcccccc---c----cCCcccccCCCCCCCC-CCeeccC
Confidence 357899999996 5999999999999642 1 2447999998899999 9999984
No 131
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.05 E-value=3.8e-05 Score=78.37 Aligned_cols=184 Identities=11% Similarity=0.091 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhcccceEEeccCCCccceeccc------cccccc--cChHHHHHHHHHHHhhcCCCEEEEEEccccCC
Q psy9514 381 YVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQG------SGSGLL--QRANILQSVITCMNEVSSLPITVKTRTGIHKD 452 (611)
Q Consensus 381 ~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g------~GsaLl--~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~ 452 (611)
+...+.++.+.+ . +|+|||. =|+..-..+| .--+|. -+.+.+.++++.+++.+++|+.+- +....
T Consensus 30 ~~~~~~~~~l~~-~-aD~IElG--~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m---~y~n~ 102 (271)
T 1ujp_A 30 EGFLQAVEEVLP-Y-ADLLEIG--LPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLM---TYLNP 102 (271)
T ss_dssp HHHHHHHHHHGG-G-CSSEEEE--CCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEE---CCHHH
T ss_pred HHHHHHHHHHHh-c-CCEEEEC--CCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEE---ecCcH
Confidence 456666666654 3 9999994 3322111122 001111 245667789999998888998873 22110
Q ss_pred --chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcCCceE-
Q psy9514 453 --NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWGASLI- 520 (611)
Q Consensus 453 --~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G~~~i- 520 (611)
..-..++++.+.++|++.+.+-.=.. +.+.++...+++.... ..+-+..+...+...+
T Consensus 103 v~~~g~~~f~~~~~~aG~dGviv~Dl~~----------ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy 172 (271)
T 1ujp_A 103 VLAWGPERFFGLFKQAGATGVILPDLPP----------DEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVY 172 (271)
T ss_dssp HHHHCHHHHHHHHHHHTCCEEECTTCCG----------GGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEE
T ss_pred HHHhhHHHHHHHHHHcCCCEEEecCCCH----------HHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEE
Confidence 01246889999999999877643221 1122233332222110 0111122222233333
Q ss_pred --EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 521 --TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 521 --tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
++.|.|....-......++++++.+. .++||+..|||+|++++.++ .+ +|+|+||.++...
T Consensus 173 ~vs~~G~TG~~~~~~~~~~~~v~~vr~~-~~~Pv~vGfGI~t~e~a~~~--~~--ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 173 AVSVTGVTGMRERLPEEVKDLVRRIKAR-TALPVAVGFGVSGKATAAQA--AV--ADGVVVGSALVRA 235 (271)
T ss_dssp EECC------------CCHHHHHHHHTT-CCSCEEEESCCCSHHHHHHH--TT--SSEEEECHHHHHH
T ss_pred EEecCcccCCCCCCCccHHHHHHHHHhh-cCCCEEEEcCCCCHHHHHHh--cC--CCEEEEChHHhcc
Confidence 34455554332333446778887654 58999999999999999996 66 9999999877653
No 132
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.04 E-value=0.00011 Score=74.76 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=63.7
Q ss_pred chhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC-
Q psy9514 509 MPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK- 586 (611)
Q Consensus 509 ~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d- 586 (611)
+..-.+.|...+-+.+. . .+.+.+.++++.+... .+||+..|||+|++++.+++..| ||+|+||.+++.|
T Consensus 192 a~~gad~G~~lV~LD~~-~-----~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aG--AD~VVVGSAav~d~ 263 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSR-N-----EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSG--ADYVGFAGALEQPD 263 (286)
T ss_dssp HHHHHHTTCSEEEEECS-S-----SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTT--CSEEEESGGGSSTT
T ss_pred HHHHHHcCCCEEEEcCC-C-----CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcC--CCEEEECchhhcCC
Confidence 33445667777766542 2 4567788998877643 79999999999999999999998 9999999999999
Q ss_pred -CchHHHHHcc
Q psy9514 587 -PWIFQEIKEK 596 (611)
Q Consensus 587 -P~lf~ei~~g 596 (611)
|.++.++...
T Consensus 264 ~Pelv~e~a~~ 274 (286)
T 3vk5_A 264 WRSALAEIAGR 274 (286)
T ss_dssp HHHHHHHHHC-
T ss_pred CHHHHHHHHHh
Confidence 7888888744
No 133
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.04 E-value=1.4e-05 Score=77.48 Aligned_cols=86 Identities=16% Similarity=0.220 Sum_probs=72.1
Q ss_pred hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 506 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 506 ~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
.+++..+...|+..+.+++.+..|...+.. ++.++++... .++|||+.|++.+++++.+++..| +|+|++|++++.
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~~-~~~i~~~~~~-~~~Pvia~~g~~~~~~~~~~~~~G--~~~~~vg~a~~~ 208 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHF 208 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCCC-HHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHT--CSEEEESHHHHT
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcccccc-HHHHHHHHHh-cCCCEEecCCCCCHHHHHHHHHcC--cHHHhhhHHHHc
Confidence 345567778888888888876666555544 8889887665 589999999999999999999987 999999999999
Q ss_pred CCchHHHHHc
Q psy9514 586 KPWIFQEIKE 595 (611)
Q Consensus 586 dP~lf~ei~~ 595 (611)
+||.+.++++
T Consensus 209 ~~~~~~~~~~ 218 (237)
T 3cwo_X 209 REIDVRELKE 218 (237)
T ss_dssp TSSCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 9999999865
No 134
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.03 E-value=5.2e-05 Score=81.45 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=99.3
Q ss_pred chHHHHHHHHHHHHhcccceEEecc------CCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEcccc
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNL------GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIH 450 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~------gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~ 450 (611)
+++.+.+.|+.+.+ .||++|.|+. |+... ....|....++++...++|++|++++| ++|.+...-++
T Consensus 152 ~~~~~~~~a~~~~~-~Gf~~vKik~~~~~~~G~~~~---s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~- 226 (407)
T 2o56_A 152 EPEQYAQAALTAVS-EGYDAIKVDTVAMDRHGNWNQ---QNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFT- 226 (407)
T ss_dssp SHHHHHHHHHHHHH-TTCSEEEECCSSBCTTSCBSC---SCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS-
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcccccCCcCcccc---CcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC-
Confidence 78889888887753 5999999996 44210 111222224577889999999999886 45554433333
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccc
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQR 530 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~ 530 (611)
+.+++.++++.|++.|+++|. +.
T Consensus 227 -~~~~a~~~~~~l~~~~i~~iE-------~P------------------------------------------------- 249 (407)
T 2o56_A 227 -DTTSAIQFGRMIEELGIFYYE-------EP------------------------------------------------- 249 (407)
T ss_dssp -CHHHHHHHHHHHGGGCCSCEE-------CS-------------------------------------------------
T ss_pred -CHHHHHHHHHHHHhcCCCEEe-------CC-------------------------------------------------
Confidence 457788999999999988653 11
Q ss_pred ccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 531 YTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 531 ~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+|+..+++.+. .++||++.+.+.+++++.++++.+ .+|.|++=
T Consensus 250 -~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 296 (407)
T 2o56_A 250 -VMPLNPAQMKQVADK-VNIPLAAGERIYWRWGYRPFLENG-SLSVIQPD 296 (407)
T ss_dssp -SCSSSHHHHHHHHHH-CCSCEEECTTCCHHHHHHHHHHTT-CCSEECCC
T ss_pred -CChhhHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEecC
Confidence 223466777777665 489999999999999999999998 79999873
No 135
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.02 E-value=0.00018 Score=70.16 Aligned_cols=188 Identities=10% Similarity=0.075 Sum_probs=106.4
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEecc--CC-CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNL--GC-PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~--gC-P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
+...+.+.++..+.++++.+.+ .|.|.|.+-. |. +. ...+-.++++.+++.++.|+.+-+-+
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~-~G~~~i~~~~~dg~~~~--------------~~~~g~~~i~~i~~~~~~~~~v~l~v 70 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEE-TDAEYVHIDIMDGQFVP--------------NISFGADVVASMRKHSKLVFDCHLMV 70 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHH-TTCCEEEEEEEBSSSSS--------------CBCBCHHHHHHHHTTCCSEEEEEEES
T ss_pred EEEEEEeCCHHHHHHHHHHHHH-cCCCEEEEEeecCCCCC--------------ccccCHHHHHHHHHhCCCCEEEEEee
Confidence 4556777777777777777753 4788766542 33 20 10111456677777767677665443
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc--------hh-hhhcchhhHhcCCc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN--------NI-IHNFMPKFRDWGAS 518 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~--------~~-~~~~~~~l~~~G~~ 518 (611)
. +. + +.++.+.++|++.|++|+..... ...+.+.++... .. ..+....+ ..+++
T Consensus 71 ~--d~-~---~~i~~~~~~gad~v~vh~~~~~~----------~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~-~~~~d 133 (220)
T 2fli_A 71 V--DP-E---RYVEAFAQAGADIMTIHTESTRH----------IHGALQKIKAAGMKAGVVINPGTPATALEPL-LDLVD 133 (220)
T ss_dssp S--SG-G---GGHHHHHHHTCSEEEEEGGGCSC----------HHHHHHHHHHTTSEEEEEECTTSCGGGGGGG-TTTCS
T ss_pred c--CH-H---HHHHHHHHcCCCEEEEccCcccc----------HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HhhCC
Confidence 2 21 1 23477888999999999865321 111112221111 01 11122222 23578
Q ss_pred eEEeccccc--cccccCCccHHHHHHHHhhC----CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHH
Q psy9514 519 LITLHGRTR--EQRYTKQADWDYIEKCAQLC----SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 519 ~itihgrtr--~g~~~~~a~~~~i~~~~k~~----~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~e 592 (611)
.+.+.+... .+....+..++.++++.+.. .++||++.|||+ ++++.++++.| +|+|.+||+++..++.-+.
T Consensus 134 ~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~G--ad~vvvGsai~~~~d~~~a 210 (220)
T 2fli_A 134 QVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAG--ANVFVAGSYLFKASDLVSQ 210 (220)
T ss_dssp EEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHT--CCEEEESHHHHTSSCHHHH
T ss_pred EEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcC--CCEEEEChHHhCCCCHHHH
Confidence 884422211 11111122233444443322 268999999998 89999988887 9999999999987765433
Q ss_pred H
Q psy9514 593 I 593 (611)
Q Consensus 593 i 593 (611)
+
T Consensus 211 ~ 211 (220)
T 2fli_A 211 V 211 (220)
T ss_dssp H
T ss_pred H
Confidence 3
No 136
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.02 E-value=7.1e-05 Score=75.88 Aligned_cols=188 Identities=11% Similarity=0.078 Sum_probs=106.2
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccc------cccccc--cChHHHHHHHHHHHhhc-CCCEEEEEEccc
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQG------SGSGLL--QRANILQSVITCMNEVS-SLPITVKTRTGI 449 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g------~GsaLl--~r~~~l~eIv~av~~~~-~~PvtVKiR~g~ 449 (611)
+.+...+.++.+. ..|+|+|||+. |+.--..+| .-.+|. -+.+.+.++++.+++.+ ++|+.+ ++.
T Consensus 29 ~~~~~~~~~~~l~-~~G~D~IElG~--P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~---m~y 102 (262)
T 2ekc_A 29 DYETSLKAFKEVL-KNGTDILEIGF--PFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL---MTY 102 (262)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--CCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE---ECC
T ss_pred ChHHHHHHHHHHH-HcCCCEEEECC--CCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE---Eec
Confidence 3456677777775 46999999953 321101111 000111 14466778999999888 899877 222
Q ss_pred cCCc--hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcCCc
Q psy9514 450 HKDN--NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWGAS 518 (611)
Q Consensus 450 ~~~~--~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G~~ 518 (611)
.... .-..++++.+.++|++.+.+..-.. +.+.++...+++.... ..+.+..+......
T Consensus 103 ~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~----------ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~g 172 (262)
T 2ekc_A 103 YNPIFRIGLEKFCRLSREKGIDGFIVPDLPP----------EEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADE 172 (262)
T ss_dssp HHHHHHHCHHHHHHHHHHTTCCEEECTTCCH----------HHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSS
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEECCCCH----------HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCC
Confidence 1100 0125788999999999988864321 2334444443332211 01112222233333
Q ss_pred eE---EeccccccccccC-CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 519 LI---TLHGRTREQRYTK-QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 519 ~i---tihgrtr~g~~~~-~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
.+ ++.|.|....-.. ....++++++.+. .++||+..|||.|++++.+ +..+ +|+|+||++++..
T Consensus 173 fiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~-~~~pv~vG~GI~t~e~~~~-~~~g--ADgvIVGSai~~~ 240 (262)
T 2ekc_A 173 MTYFVSVTGTTGAREKLPYERIKKKVEEYREL-CDKPVVVGFGVSKKEHARE-IGSF--ADGVVVGSALVKL 240 (262)
T ss_dssp CEEEESSCC---------CHHHHHHHHHHHHH-CCSCEEEESSCCSHHHHHH-HHTT--SSEEEECHHHHHH
T ss_pred CEEEEecCCccCCCCCcCcccHHHHHHHHHhh-cCCCEEEeCCCCCHHHHHH-HHcC--CCEEEECHHHHhh
Confidence 33 2223333321111 1123677777665 4899999999999999999 6766 9999999998754
No 137
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.01 E-value=6.5e-05 Score=81.08 Aligned_cols=148 Identities=10% Similarity=0.069 Sum_probs=109.7
Q ss_pred ccceeee-cccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEE
Q psy9514 368 ANLFGVQ-LCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVK 444 (611)
Q Consensus 368 ~~~~ivQ-i~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVK 444 (611)
..++... +...+++.+++.|+.+.+ .||+.|.|++|+.- . + |+ ++++...++|++||+++| ++|.|.
T Consensus 167 ~v~~y~s~~~~~~~e~~~~~a~~~~~-~Gf~~iKik~g~gp--~--d--g~---~~~~~die~v~avReavG~d~~L~vD 236 (412)
T 3stp_A 167 RIPVYYSKLYAGSIEAMQKEAEEAMK-GGYKAFKSRFGYGP--K--D--GM---PGMRENLKRVEAVREVIGYDNDLMLE 236 (412)
T ss_dssp SEEEEEECCCSCCHHHHHHHHHHHHT-TTCSEEEEECCCCG--G--G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHH-cCCCEEEEecccCc--c--c--cc---chHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 3444444 345688999988888753 69999999999851 1 1 22 456788899999999986 455555
Q ss_pred EEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 445 TRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 445 iR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
...++ +.+++.+++++|++.|+.+|. |.
T Consensus 237 aN~~~--~~~~Ai~~~~~Le~~~i~~iE-------eP------------------------------------------- 264 (412)
T 3stp_A 237 CYMGW--NLDYAKRMLPKLAPYEPRWLE-------EP------------------------------------------- 264 (412)
T ss_dssp CTTCS--CHHHHHHHHHHHGGGCCSEEE-------CC-------------------------------------------
T ss_pred CCCCC--CHHHHHHHHHHHHhcCCCEEE-------CC-------------------------------------------
Confidence 44444 457889999999999998873 11
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-+-.
T Consensus 265 -------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~li~~~-a~D~v~ik~~~~GG 317 (412)
T 3stp_A 265 -------VIADDVAGYAELNAM-NIVPISGGEHEFSVIGCAELINRK-AVSVLQYDTNRVGG 317 (412)
T ss_dssp -------SCTTCHHHHHHHHHT-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCHHHHTH
T ss_pred -------CCcccHHHHHHHHhC-CCCCEEeCCCCCCHHHHHHHHHcC-CCCEEecChhhcCC
Confidence 223366777777665 589999999999999999999988 79999986554433
No 138
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.01 E-value=0.00019 Score=70.95 Aligned_cols=194 Identities=8% Similarity=0.026 Sum_probs=114.1
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEecc--CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNL--GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~--gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
+...+.+.+...+.+.++.+. ..|+|.|++.. |+-..+ ..+-.++++.+++.++.|+.|-+-+.
T Consensus 9 i~psi~a~d~~~l~~~i~~~~-~~Gad~i~l~i~Dg~fv~~-------------~~~~~~~~~~lr~~~~~~~~v~lmv~ 74 (228)
T 1h1y_A 9 IAPSMLSSDFANLAAEADRMV-RLGADWLHMDIMDGHFVPN-------------LTIGAPVIQSLRKHTKAYLDCHLMVT 74 (228)
T ss_dssp EEEBGGGSCGGGHHHHHHHHH-HTTCSEEEEEEEBSSSSSC-------------BCBCHHHHHHHHTTCCSEEEEEEESS
T ss_pred EEEEeeeCCHHHHHHHHHHHH-HcCCCEEEEEEecCCcCcc-------------hhhCHHHHHHHHhhcCCcEEEEEEec
Confidence 556777777777777777664 35888876642 221011 11123677888887766777665542
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcC-hhHHHHHhhh----cccCchh-hhhcchhhHhc--CCceE
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD-WDYIEKCAQL----CSRDNNI-IHNFMPKFRDW--GASLI 520 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~ad-w~~i~~~~~~----~~~~~~~-~~~~~~~l~~~--G~~~i 520 (611)
+ + .++++.+.++|+|.|++|+-.... . -..+..+.+. .-..+.. ..+....+.+. +++++
T Consensus 75 --d--~--~~~i~~~~~agad~v~vH~~~~~~------~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~v 142 (228)
T 1h1y_A 75 --N--P--SDYVEPLAKAGASGFTFHIEVSRD------NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELV 142 (228)
T ss_dssp --C--G--GGGHHHHHHHTCSEEEEEGGGCTT------THHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEE
T ss_pred --C--H--HHHHHHHHHcCCCEEEECCCCccc------HHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEE
Confidence 2 1 245677777999999999864221 1 0112222111 0000111 11223334443 89999
Q ss_pred Eecccccc--ccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 521 TLHGRTRE--QRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 521 tihgrtr~--g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+.....- +.-..+..++.++++.+...++||+.-|||+. +.+.+++..| +|+|.+|++++..|+.-+.+
T Consensus 143 l~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~aG--aD~vvvGsai~~~~d~~~~~ 214 (228)
T 1h1y_A 143 LVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAASAG--ANCIVAGSSIFGAAEPGEVI 214 (228)
T ss_dssp EEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHHHHT--CCEEEESHHHHTSSCHHHHH
T ss_pred EEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHHHcC--CCEEEECHHHHCCCCHHHHH
Confidence 77443321 11112233556666655444899999999976 8999999987 99999999999877754444
No 139
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.00 E-value=0.00017 Score=77.14 Aligned_cols=125 Identities=4% Similarity=-0.004 Sum_probs=94.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.+.+.|+.+. ..||+.|.|++|++ +++...++|++|++++| ++|.+...-++ +.+++
T Consensus 145 ~~~~~~~~a~~~~-~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~~~~l~vDan~~~--~~~~a 206 (389)
T 2oz8_A 145 DDDAFVSLFSHAA-SIGYSAFKIKVGHR---------------DFDRDLRRLELLKTCVPAGSKVMIDPNEAW--TSKEA 206 (389)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEEECCCS---------------SHHHHHHHHHHHHTTSCTTCEEEEECTTCB--CHHHH
T ss_pred CHHHHHHHHHHHH-HhCCCEEEEccCCC---------------CHHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHH
Confidence 7888888887765 35999999998872 35677899999999985 45555544344 34778
Q ss_pred HHHHHHHHH--cCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 457 HNFMPKFRD--WGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 457 ~~la~~l~~--aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
.++++.|++ .++.+|. |. ..+
T Consensus 207 ~~~~~~l~~~g~~i~~iE-------qP--------------------------------------------------~~~ 229 (389)
T 2oz8_A 207 LTKLVAIREAGHDLLWVE-------DP--------------------------------------------------ILR 229 (389)
T ss_dssp HHHHHHHHHTTCCCSEEE-------SC--------------------------------------------------BCT
T ss_pred HHHHHHHHhcCCCceEEe-------CC--------------------------------------------------CCC
Confidence 899999999 6665542 21 123
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+|+.++++.+...++||++.+.+ +++++.++++.+ .+|.|++.
T Consensus 230 ~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~-~~d~v~ik 273 (389)
T 2oz8_A 230 HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAH-AADILNVH 273 (389)
T ss_dssp TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTT-CCSEEEEC
T ss_pred cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcC-CCCEEEEC
Confidence 466777777654327999999999 999999999998 89999998
No 140
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.00 E-value=7.5e-05 Score=80.02 Aligned_cols=136 Identities=13% Similarity=0.184 Sum_probs=101.3
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRT 447 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~ 447 (611)
++...+...+++.+.+.|+.+.+ .||++|.|+.|+ +++...+++++|+++++ +++.+...-
T Consensus 136 p~~~~~g~~~~e~~~~~a~~~~~-~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 136 PLGLVLGAGEPEAVAEEALAVLR-EGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EBCEECCCSCHHHHHHHHHHHHH-HTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred ceEEECCCCCHHHHHHHHHHHHH-hhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 33344443678888888877653 499999999773 45677899999999885 666665443
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
++ +.+++.++++.|++.|+++|. |.
T Consensus 199 ~~--~~~~a~~~~~~l~~~~i~~iE-------qP---------------------------------------------- 223 (397)
T 2qde_A 199 AW--TYDQALTTIRALEKYNLSKIE-------QP---------------------------------------------- 223 (397)
T ss_dssp CC--CHHHHHHHHHHHGGGCCSCEE-------CC----------------------------------------------
T ss_pred CC--CHHHHHHHHHHHHhCCCCEEE-------CC----------------------------------------------
Confidence 44 346788999999999988653 11
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHh
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGA 583 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRga 583 (611)
..+.+++..+++.+. .++||++.+.+.|++++.++++.+ .+|.|++=-.-
T Consensus 224 ----~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~ 273 (397)
T 2qde_A 224 ----LPAWDLDGMARLRGK-VATPIYADESAQELHDLLAIINKG-AADGLMIKTQK 273 (397)
T ss_dssp ----SCTTCHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHH
T ss_pred ----CChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEEeccc
Confidence 223466777777654 589999999999999999999988 79999985443
No 141
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.96 E-value=0.00012 Score=72.81 Aligned_cols=190 Identities=12% Similarity=0.149 Sum_probs=117.2
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEecc--CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNL--GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~--gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
.+...+.+.+...+.+..+.+. ..|+|.|+|-. |+= ..+..+-.++++.+++.++.|+.+-+-+
T Consensus 6 ~i~psila~D~~~l~~~i~~~~-~~Gad~ihldi~DG~f-------------vp~~~~g~~~v~~lr~~~~~~~~vhlmv 71 (230)
T 1tqj_A 6 VVAPSILSADFSRLGEEIKAVD-EAGADWIHVDVMDGRF-------------VPNITIGPLIVDAIRPLTKKTLDVHLMI 71 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHH-HTTCSEEEEEEEBSSS-------------SSCBCBCHHHHHHHGGGCCSEEEEEEES
T ss_pred EEEEEeeecCHhHHHHHHHHHH-HcCCCEEEEEEEecCC-------------CcchhhhHHHHHHHHhhcCCcEEEEEEc
Confidence 3566777778777777777774 35889876653 221 1112222478889998887788876654
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEcc--ccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcC
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGR--TREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWG 516 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR--~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G 516 (611)
. + + .++++.+.++|+|.|++|.- ... .+..+...++..... ..+....+. .+
T Consensus 72 ~--d--p--~~~i~~~~~aGadgv~vh~e~~~~~----------~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~-~~ 134 (230)
T 1tqj_A 72 V--E--P--EKYVEDFAKAGADIISVHVEHNASP----------HLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVL-PV 134 (230)
T ss_dssp S--S--G--GGTHHHHHHHTCSEEEEECSTTTCT----------THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GG
T ss_pred c--C--H--HHHHHHHHHcCCCEEEECcccccch----------hHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHH-hc
Confidence 2 1 1 24678888999999999976 321 122233333222111 111222222 26
Q ss_pred CceEE---eccccccccccCCccHHHHHHHHhhC----CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 517 ASLIT---LHGRTREQRYTKQADWDYIEKCAQLC----SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 517 ~~~it---ihgrtr~g~~~~~a~~~~i~~~~k~~----~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
+++|. +++.+..+. ..+..++.++++.+.. .++||.+-|||+. +.+.++++.| +|+|.+|++++..|+.
T Consensus 135 ~D~v~~msv~pg~ggq~-~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aG--ad~vvvGSai~~a~d~ 210 (230)
T 1tqj_A 135 CDLILIMSVNPGFGGQS-FIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAG--ANAIVAGSAVFNAPNY 210 (230)
T ss_dssp CSEEEEESSCC----CC-CCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHT--CCEEEESHHHHTSSCH
T ss_pred CCEEEEEEeccccCCcc-CcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcC--CCEEEECHHHHCCCCH
Confidence 78883 344333222 2334567777665543 2799999999986 9999999988 9999999999987775
Q ss_pred HHHHH
Q psy9514 590 FQEIK 594 (611)
Q Consensus 590 f~ei~ 594 (611)
-+.++
T Consensus 211 ~~~~~ 215 (230)
T 1tqj_A 211 AEAIA 215 (230)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 142
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.96 E-value=0.00013 Score=70.56 Aligned_cols=160 Identities=9% Similarity=0.015 Sum_probs=95.4
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHh---hcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNE---VSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~---~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
.|+|.|+|.. |. ..++.+.++++.+++ ..+++|.+. + .++.+.++|++.
T Consensus 38 ~G~~~i~l~~--~~-------------~~~~~~~~~~~~l~~~~~~~~v~v~v~------~-------~~~~a~~~gad~ 89 (215)
T 1xi3_A 38 GGATAIQMRI--KN-------------APTREMYEIGKTLRQLTREYDALFFVD------D-------RVDVALAVDADG 89 (215)
T ss_dssp TTCSEEEECC--CS-------------CCHHHHHHHHHHHHHHHHHTTCEEEEE------S-------CHHHHHHHTCSE
T ss_pred CCCCEEEECC--CC-------------CCHHHHHHHHHHHHHHHHHcCCeEEEc------C-------hHHHHHHcCCCE
Confidence 4899998763 20 012223444444443 246677663 1 134667889999
Q ss_pred EEEEccccccccccCcChhHHHHHh-hhcccCchhhhhcchhhHhcCCceEEeccccccc--cccCCccHHHHHHHHhhC
Q psy9514 471 ITLHGRTREQRYTKQADWDYIEKCA-QLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQ--RYTKQADWDYIEKCAQLC 547 (611)
Q Consensus 471 ItvhgR~r~qr~~~~adw~~i~~~~-~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g--~~~~~a~~~~i~~~~k~~ 547 (611)
|+++..... ...+.++. ..+.-........+....+.|++.+.+++....+ .-....+|+.++++.+..
T Consensus 90 v~l~~~~~~--------~~~~~~~~~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 161 (215)
T 1xi3_A 90 VQLGPEDMP--------IEVAKEIAPNLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV 161 (215)
T ss_dssp EEECTTSCC--------HHHHHHHCTTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC
T ss_pred EEECCccCC--------HHHHHHhCCCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC
Confidence 988654311 11222211 0000000001111334567899999875421110 002456789998887654
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
++||++.|||+ ++++.++++.| +|+|++|++++..|+.-+.+
T Consensus 162 -~~pvia~GGI~-~~nv~~~~~~G--a~gv~vgs~i~~~~d~~~~~ 203 (215)
T 1xi3_A 162 -KIPVVAIGGIN-KDNAREVLKTG--VDGIAVISAVMGAEDVRKAT 203 (215)
T ss_dssp -SSCEEEESSCC-TTTHHHHHTTT--CSEEEESHHHHTSSSHHHHH
T ss_pred -CCCEEEECCcC-HHHHHHHHHcC--CCEEEEhHHHhCCCCHHHHH
Confidence 89999999998 99999998876 99999999999887654444
No 143
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.94 E-value=4.8e-05 Score=76.26 Aligned_cols=59 Identities=12% Similarity=0.170 Sum_probs=51.4
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc-hHHHHHc
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW-IFQEIKE 595 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~-lf~ei~~ 595 (611)
..+.++++++.+...++||+..|||+|++++.++++ | ||+|+||.++..+|. ++++++.
T Consensus 167 ~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-g--Ad~VIVGSa~v~~~~~~~~~v~~ 226 (240)
T 1viz_A 167 LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-H--ADVIVVGNAVYEDFDRALKTVAA 226 (240)
T ss_dssp CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-T--CSEEEECTHHHHCHHHHHTHHHH
T ss_pred cChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-C--CCEEEEChHHHhCHHHHHHHHHH
Confidence 447888998876533899999999999999999888 8 999999999999999 8888754
No 144
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=97.91 E-value=0.00012 Score=78.41 Aligned_cols=127 Identities=12% Similarity=0.088 Sum_probs=98.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.+.+.|+.+. ..||++|.|+.|.+ +++...++|++|+++++ ++|.+...-++ +.+++
T Consensus 175 ~~e~~~~~a~~~~-~~Gf~~vKik~g~~---------------~~~~d~e~v~avR~avG~d~~l~vDan~~~--~~~~a 236 (398)
T 2pp0_A 175 PLDQVLKNVVISR-ENGIGGIKLKVGQP---------------NCAEDIRRLTAVREALGDEFPLMVDANQQW--DRETA 236 (398)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECCCS---------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCS--CHHHH
T ss_pred CHHHHHHHHHHHH-HhCCCeEEEecCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEECCCCC--CHHHH
Confidence 7888888888775 35999999987642 47788999999999885 66766654444 34778
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+++|. |. ..+.+
T Consensus 237 i~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d 259 (398)
T 2pp0_A 237 IRMGRKMEQFNLIWIE-------EP--------------------------------------------------LDAYD 259 (398)
T ss_dssp HHHHHHHGGGTCSCEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHHHcCCceee-------CC--------------------------------------------------CChhh
Confidence 8999999999988653 11 12346
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
|+..+++.+. .++||++.+.+.+++++.++++.+ .+|.|++--.
T Consensus 260 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik~~ 303 (398)
T 2pp0_A 260 IEGHAQLAAA-LDTPIATGEMLTSFREHEQLILGN-ASDFVQPDAP 303 (398)
T ss_dssp HHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCCHH
T ss_pred HHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcC-CCCEEEeCcc
Confidence 6777777665 489999999999999999999998 8999998533
No 145
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.90 E-value=2e-05 Score=79.36 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
...++++.++++|++.|.++....... . ..
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~-------------------------------------------------~-~g 60 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGT-------------------------------------------------K-SG 60 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSC-------------------------------------------------S-SC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccC-------------------------------------------------C-Cc
Confidence 467889999999999999865432110 1 22
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh-h--CCchHHHHHc
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL-I--KPWIFQEIKE 595 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL-~--dP~lf~ei~~ 595 (611)
.+++.++++.+. .++||+.+|+|.+++++.++++.| +|+|++|+.++ . +|+++.++.+
T Consensus 61 ~~~~~i~~i~~~-~~iPvi~~ggi~~~~~i~~~~~~G--ad~v~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 61 YDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAG--ADKALAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CCHHHHHHHGGG-CCSCEEEESCCCSTHHHHHHHHHT--CSEEECCCCC------CHHHHHHCC
T ss_pred ccHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcC--CcHhhhhHHHHhCCCCHHHHHHHHH
Confidence 467888887665 589999999999999999999987 99999999999 5 9999998854
No 146
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=97.89 E-value=0.00035 Score=73.30 Aligned_cols=150 Identities=11% Similarity=0.051 Sum_probs=106.4
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.++...+.+.+++.+.+.|+.+. ..||+.|.|+.|+ +++...+++++|+++ +..+.+.+=..
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~-g~~~~l~vDan 190 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIF-EEGFRVIKIKVGE----------------NLKEDIEAVEEIAKV-TRGAKYIVDAN 190 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCS----------------CHHHHHHHHHHHHHH-STTCEEEEECT
T ss_pred eeeeEEecCCCHHHHHHHHHHHH-HcCcCEEEEeecC----------------CHHHHHHHHHHHHhh-CCCCeEEEECC
Confidence 34444556678888888887765 3599999999876 355567889999998 64443332211
Q ss_pred ccCCchHHHHHHHHHHHcCCC--EEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGAS--LITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd--~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
..-+.+++.++++.|++.|++ +|. |.
T Consensus 191 ~~~~~~~a~~~~~~l~~~~i~~~~iE-------~P--------------------------------------------- 218 (345)
T 2zad_A 191 MGYTQKEAVEFARAVYQKGIDIAVYE-------QP--------------------------------------------- 218 (345)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCCSEEE-------CC---------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHhcCCCeeeee-------CC---------------------------------------------
Confidence 111346788999999999988 643 21
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE--cHHhhhCCchHHHHHc
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI--GRGALIKPWIFQEIKE 595 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI--GRgaL~dP~lf~ei~~ 595 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++ +||-|....-...+.+
T Consensus 219 -----~~~~~~~~~~~l~~~-~~ipia~dE~~~~~~~~~~~i~~~-~~d~v~ik~~~GGit~~~~i~~~A~ 282 (345)
T 2zad_A 219 -----VRREDIEGLKFVRFH-SPFPVAADESARTKFDVMRLVKEE-AVDYVNIKLMKSGISDALAIVEIAE 282 (345)
T ss_dssp -----SCTTCHHHHHHHHHH-SSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHHHHHHHHHHHHHH
T ss_pred -----CCcccHHHHHHHHHh-CCCCEEEeCCcCCHHHHHHHHHhC-CCCEEEEecccccHHHHHHHHHHHH
Confidence 123466777777665 489999999999999999999998 8999999 7776666544444333
No 147
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=97.88 E-value=2.7e-06 Score=69.21 Aligned_cols=59 Identities=20% Similarity=0.545 Sum_probs=45.1
Q ss_pred CcccCCcccccCCCCCCCCCCC-CCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCcc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGE-KCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGSS 136 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~-~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~ 136 (611)
+....|..|.++ .|..|+ .|+|+|+..+-.....+.-...|..|.. |.|..| .|+|+.+
T Consensus 4 ~k~~vC~~f~~G----~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~ 63 (70)
T 3d2q_A 4 DRLEVCREYQRG----NCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSRE-KCKYFHP 63 (70)
T ss_dssp CEEEBCHHHHTT----CCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHT-TCCCCT-TCCSBCC
T ss_pred ccchhCHHHhcC----CCCCCCCCCCCccCcccccccccCCcceeccccCc-CCCCCC-CcCeeCC
Confidence 457889999876 699999 5999999764322222333568999966 999999 9999853
No 148
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.88 E-value=0.00015 Score=79.66 Aligned_cols=129 Identities=10% Similarity=-0.035 Sum_probs=84.9
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.|+|+|.++... .+...+.+.++.+++.+ ++|+.++-- . ..+.+..+.++|+++|.
T Consensus 244 ~G~d~ivi~~a~---------------g~~~~~~~~i~~l~~~~p~~pvi~G~v----~----t~~~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 244 AGADAIVIDTAH---------------GHSAGVLRKIAEIRAHFPNRTLIAGNI----A----TAEGARALYDAGVDVVK 300 (491)
T ss_dssp HTCSEEEECCSC---------------TTCHHHHHHHHHHHHHCSSSCEEEEEE----C----SHHHHHHHHHTTCSEEE
T ss_pred cCCCeEEEeeec---------------CcchhHHHHHHHHHHHCCCCcEeCCCc----c----CHHHHHHHHHcCCCEEE
Confidence 499999987521 12334567788888887 788874411 1 12567788899999998
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhh--CCCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL--CSPA 550 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~--~~~i 550 (611)
|...... |.+.. .+ . -.+.+....+.+++.. ..++
T Consensus 301 vg~g~g~--------~~~tr------------------~~---------------~--~~~~p~~~~l~~~~~~~~~~~i 337 (491)
T 1zfj_A 301 VGIGPGS--------ICTTR------------------VV---------------A--GVGVPQVTAIYDAAAVAREYGK 337 (491)
T ss_dssp ECSSCCT--------TBCHH------------------HH---------------T--CCCCCHHHHHHHHHHHHHHTTC
T ss_pred ECccCCc--------ceEEe------------------ee---------------c--CCCCCcHHHHHHHHHHHhhcCC
Confidence 8422110 00000 00 0 0123345555555442 2479
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 551 PLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 551 PVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
|||+.|||.+++|+.+++..| +|+||+||+++..++.+
T Consensus 338 pvia~GGi~~~~di~kal~~G--A~~v~vG~~~~~~~e~~ 375 (491)
T 1zfj_A 338 TIIADGGIKYSGDIVKALAAG--GNAVMLGSMFAGTDEAP 375 (491)
T ss_dssp EEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBSSCC
T ss_pred CEEeeCCCCCHHHHHHHHHcC--CcceeeCHHhhCCCcCc
Confidence 999999999999999999987 99999999999765533
No 149
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.88 E-value=0.00076 Score=74.27 Aligned_cols=135 Identities=15% Similarity=0.111 Sum_probs=87.1
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~ 457 (611)
.++.+.++..++ .+|+|.|=|..++-+ ...+.++++.+++.. ++||.+--- .+.
T Consensus 279 ~~d~~eR~~aLv--~AGvD~iviD~ahGh---------------s~~v~~~i~~ik~~~p~~~viaGNV--------aT~ 333 (556)
T 4af0_A 279 RPGDKDRLKLLA--EAGLDVVVLDSSQGN---------------SVYQIEFIKWIKQTYPKIDVIAGNV--------VTR 333 (556)
T ss_dssp SHHHHHHHHHHH--HTTCCEEEECCSCCC---------------SHHHHHHHHHHHHHCTTSEEEEEEE--------CSH
T ss_pred CccHHHHHHHHH--hcCCcEEEEeccccc---------------cHHHHHHHHHHHhhCCcceEEeccc--------cCH
Confidence 455666665555 358999888765541 234678888888876 467666421 233
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 537 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~ 537 (611)
+-++.|.++|+|+|-|--.....-. ||...-.+-+-+
T Consensus 334 e~a~~Li~aGAD~vkVGiGpGSiCt-------------------------------------------Tr~v~GvG~PQ~ 370 (556)
T 4af0_A 334 EQAAQLIAAGADGLRIGMGSGSICI-------------------------------------------TQEVMAVGRPQG 370 (556)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTBC-------------------------------------------CTTTCCSCCCHH
T ss_pred HHHHHHHHcCCCEEeecCCCCcccc-------------------------------------------cccccCCCCcHH
Confidence 5677888999999987544321110 111001122233
Q ss_pred HHHHHHH---hhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 538 DYIEKCA---QLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 538 ~~i~~~~---k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
..|.+|+ +.. .+|||+-|||.+.-|+.++|..| +|+|||| ++|+
T Consensus 371 tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~KAlaaG--Ad~VMlG-sllA 417 (556)
T 4af0_A 371 TAVYAVAEFASRF-GIPCIADGGIGNIGHIAKALALG--ASAVMMG-GLLA 417 (556)
T ss_dssp HHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTT--CSEEEES-TTTT
T ss_pred HHHHHHHHHHHHc-CCCEEecCCcCcchHHHHHhhcC--CCEEEEc-hhhc
Confidence 3444443 333 79999999999999999999998 9999999 4554
No 150
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=97.86 E-value=0.00015 Score=77.36 Aligned_cols=126 Identities=9% Similarity=0.135 Sum_probs=95.7
Q ss_pred Cch---HHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCC
Q psy9514 378 NNP---YVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKD 452 (611)
Q Consensus 378 ~~p---~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~ 452 (611)
.++ +.+.+.|+.+. ..||++|.|+.|++ +++...+++++|++++| +++.+...-++ +
T Consensus 135 ~~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~~---------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~--~ 196 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQL-KKGFEQIKVKIGGT---------------SFKEDVRHINALQHTAGSSITMILDANQSY--D 196 (382)
T ss_dssp SSTTHHHHHHHHHHHHH-TTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCC--C
T ss_pred CCcccHHHHHHHHHHHH-HcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhhCCCCEEEEECCCCC--C
Confidence 578 88888877765 45999999998872 36778899999999885 55655544344 3
Q ss_pred chHHHHHHHHHHHc-CCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 453 NNIIHNFMPKFRDW-GASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 453 ~~~a~~la~~l~~a-Gvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
.+++.++++.|++. |+++|. |.
T Consensus 197 ~~~a~~~~~~l~~~~~i~~iE-------qP-------------------------------------------------- 219 (382)
T 2gdq_A 197 AAAAFKWERYFSEWTNIGWLE-------EP-------------------------------------------------- 219 (382)
T ss_dssp HHHHHTTHHHHTTCSCEEEEE-------CC--------------------------------------------------
T ss_pred HHHHHHHHHHHhhccCCeEEE-------CC--------------------------------------------------
Confidence 46788899999988 877652 21
Q ss_pred cCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 532 TKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+++..+++.+. .++||++.+.++|++++.++++.+ .+|.|++-
T Consensus 220 ~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 266 (382)
T 2gdq_A 220 LPFDQPQDYAMLRSR-LSVPVAGGENMKGPAQYVPLLSQR-CLDIIQPD 266 (382)
T ss_dssp SCSSCHHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCC
T ss_pred CCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcC-CCCEEecC
Confidence 123466777776654 589999999999999999999988 79999873
No 151
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.84 E-value=0.00045 Score=67.58 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=58.2
Q ss_pred chhhHhcCCceEEe----ccccccccccCCccHHHHHHHHhhCCC-CcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHh
Q psy9514 509 MPKFRDWGASLITL----HGRTREQRYTKQADWDYIEKCAQLCSP-APLYGNGDILSYEDYTESLKKSPSISGVMIGRGA 583 (611)
Q Consensus 509 ~~~l~~~G~~~iti----hgrtr~g~~~~~a~~~~i~~~~k~~~~-iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRga 583 (611)
+..+.+.|++.+.+ ...++.+ +..+..|+.++++.+.. + +||++.|||+ ++++.++++.| +|+|++|+++
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~~~-~~~~~~~~~l~~~~~~~-~~~pvia~GGI~-~~nv~~~~~~G--a~gv~vgs~i 203 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETKKD-TRAVQGVSLIEAVRRQG-ISIPIVGIGGIT-IDNAAPVIQAG--ADGVSMISAI 203 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSSSS-CCCCCTTHHHHHHHHTT-CCCCEEEESSCC-TTTSHHHHHTT--CSEEEESHHH
T ss_pred HHHHHhCCCCEEEECCCcCCCCCCC-CCCccCHHHHHHHHHhC-CCCCEEEEcCCC-HHHHHHHHHcC--CCEEEEhHHh
Confidence 44566789999985 3333322 23445789999887654 5 9999999998 99999999877 9999999999
Q ss_pred hhCCch
Q psy9514 584 LIKPWI 589 (611)
Q Consensus 584 L~dP~l 589 (611)
+..++.
T Consensus 204 ~~~~d~ 209 (227)
T 2tps_A 204 SQAEDP 209 (227)
T ss_dssp HTSSCH
T ss_pred hcCCCH
Confidence 976554
No 152
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.83 E-value=0.00043 Score=73.86 Aligned_cols=149 Identities=8% Similarity=0.036 Sum_probs=108.8
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.++...+...+++.+.+.++...+..||..|-|..|++ +++.-.+++++|+++++ +++.|...
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 44555666778888777766654444999999998763 35556788999999986 56666655
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ ..++.++++.|++.|+.+|. |.
T Consensus 203 ~~~~--~~~A~~~~~~l~~~~i~~iE-------qP--------------------------------------------- 228 (383)
T 3i4k_A 203 ARWD--RRTALHYLPILAEAGVELFE-------QP--------------------------------------------- 228 (383)
T ss_dssp TCSC--HHHHHHHHHHHHHTTCCEEE-------SC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHHHhcCCCEEE-------CC---------------------------------------------
Confidence 5553 47889999999999998874 21
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-+-...-+.+|
T Consensus 229 -----~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~~i 288 (383)
T 3i4k_A 229 -----TPADDLETLREITRR-TNVSVMADESVWTPAEALAVVKAQ-AADVIALKTTKHGGLLESKKI 288 (383)
T ss_dssp -----SCTTCHHHHHHHHHH-HCCEEEESTTCSSHHHHHHHHHHT-CCSEEEECTTTTTSHHHHHHH
T ss_pred -----CChhhHHHHHHHHhh-CCCCEEecCccCCHHHHHHHHHcC-CCCEEEEcccccCCHHHHHHH
Confidence 223456667776655 489999999999999999999988 799999975554444434443
No 153
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=97.82 E-value=0.00016 Score=78.34 Aligned_cols=126 Identities=13% Similarity=0.166 Sum_probs=95.5
Q ss_pred cCch-HHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCc
Q psy9514 377 GNNP-YVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDN 453 (611)
Q Consensus 377 g~~p-~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~ 453 (611)
..++ +.+.+.|+.+. ..||++|.|+.|+ +++...++|++|+++++ +++.+...-++ +.
T Consensus 182 ~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~--~~ 242 (428)
T 3bjs_A 182 GYQPKESLAEEAQEYI-ARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAY--TM 242 (428)
T ss_dssp CSCCHHHHHHHHHHHH-HHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCC--CH
T ss_pred CCChHHHHHHHHHHHH-HCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCC--CH
Confidence 3577 88888877765 3499999999876 36778899999999885 45555443333 34
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccC
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTK 533 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~ 533 (611)
+++.++++.|++.|+++|. |. ..
T Consensus 243 ~eai~~~~~L~~~~i~~iE-------qP--------------------------------------------------~~ 265 (428)
T 3bjs_A 243 ADARRVLPVLAEIQAGWLE-------EP--------------------------------------------------FA 265 (428)
T ss_dssp HHHHHHHHHHHHTTCSCEE-------CC--------------------------------------------------SC
T ss_pred HHHHHHHHHHHhcCCCEEE-------CC--------------------------------------------------CC
Confidence 7788999999999988653 21 12
Q ss_pred CccHHHHHHHHhhCCC-CcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 534 QADWDYIEKCAQLCSP-APLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~-iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
+.+++..+++.+. .+ +||++.+.+.+++++.++++.+ .+|.|++=
T Consensus 266 ~~d~~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 311 (428)
T 3bjs_A 266 CNDFASYREVAKI-TPLVPIAAGENHYTRFEFGQMLDAG-AVQVWQPD 311 (428)
T ss_dssp TTCHHHHHHHTTT-CSSSCEEECTTCCSHHHHHHHHTTC-CEEEECCB
T ss_pred ccCHHHHHHHHHh-CCCCcEEcCCCcCCHHHHHHHHHhC-CCCEEEeC
Confidence 3456667776554 47 9999999999999999999988 79999874
No 154
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=97.80 E-value=0.00012 Score=77.96 Aligned_cols=127 Identities=12% Similarity=0.141 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHHH
Q psy9514 380 PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 380 p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a~ 457 (611)
++.+++.|+.+.+ .||+.|.|+.||+ | .+++...+++++||++++ +++.|...-+++ +.+++.
T Consensus 147 ~e~~~~~a~~~~~-~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~-d~~~A~ 211 (374)
T 3sjn_A 147 PEDNVAIVQGLKD-QGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWH-TCGHSA 211 (374)
T ss_dssp GGGGHHHHHHHHT-TTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTC-SHHHHH
T ss_pred HHHHHHHHHHHHH-cCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCC-CHHHHH
Confidence 3777777777643 4999999999986 2 247888899999999985 456655444443 257889
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 537 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~ 537 (611)
.+++.|++.|+.+|. |. ..+.++
T Consensus 212 ~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~~~ 234 (374)
T 3sjn_A 212 MMAKRLEEFNLNWIE-------EP--------------------------------------------------VLADSL 234 (374)
T ss_dssp HHHHHSGGGCCSEEE-------CS--------------------------------------------------SCTTCH
T ss_pred HHHHHhhhcCceEEE-------CC--------------------------------------------------CCcccH
Confidence 999999999988763 11 123356
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
+.++++.+. .++||++.+.+++++++.++++.+ .+|.|++-
T Consensus 235 ~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k 275 (374)
T 3sjn_A 235 ISYEKLSRQ-VSQKIAGGESLTTRYEFQEFITKS-NADIVQPD 275 (374)
T ss_dssp HHHHHHHHH-CSSEEEECTTCCHHHHHHHHHHHH-CCSEECCB
T ss_pred HHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEeC
Confidence 777777665 589999999999999999999987 79999874
No 155
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.79 E-value=8.5e-05 Score=72.88 Aligned_cols=144 Identities=6% Similarity=-0.021 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc
Q psy9514 423 ANILQSVITCMNEVSS--LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR 500 (611)
Q Consensus 423 ~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~ 500 (611)
+..+.++++.++.... .++++- +. +..+.++|++.|++|+.... +..+..+.+.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~~l~v~------~~-------~~~a~~~gad~v~l~~~~~~-----------~~~~~~~~~~ 110 (221)
T 1yad_A 55 AADILKLLDLIFEGGIDKRKLVMN------GR-------VDIALFSTIHRVQLPSGSFS-----------PKQIRARFPH 110 (221)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE------SC-------HHHHHTTTCCEEEECTTSCC-----------HHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhcCcCCeEEEe------Ch-------HHHHHHcCCCEEEeCCCccC-----------HHHHHHHCCC
Confidence 4455667777765421 134442 11 24567899999999876321 1122222110
Q ss_pred Cc----hhhhhcchhhHhcCCceEEecccccccccc--CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCc
Q psy9514 501 DN----NIIHNFMPKFRDWGASLITLHGRTREQRYT--KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSI 574 (611)
Q Consensus 501 ~~----~~~~~~~~~l~~~G~~~itihgrtr~g~~~--~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~a 574 (611)
.. -.....+....+.|+++|.+......+... .+..|+.++++.+.. ++||++.||| |++++.++++.| +
T Consensus 111 ~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~G--a 186 (221)
T 1yad_A 111 LHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAG--A 186 (221)
T ss_dssp CEEEEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTT--C
T ss_pred CEEEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcC--C
Confidence 00 001122345567899999875431111111 245788898887654 8999999999 999999999987 9
Q ss_pred cEEEEcHHhhhCCchHHHHH
Q psy9514 575 SGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 575 D~VmIGRgaL~dP~lf~ei~ 594 (611)
|+|++|++++..|+....++
T Consensus 187 ~gv~vgs~i~~~~d~~~~~~ 206 (221)
T 1yad_A 187 DGIAVMSGIFSSAEPLEAAR 206 (221)
T ss_dssp SEEEESHHHHTSSSHHHHHH
T ss_pred CEEEEhHHhhCCCCHHHHHH
Confidence 99999999998877544443
No 156
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.77 E-value=0.0002 Score=77.03 Aligned_cols=141 Identities=7% Similarity=0.076 Sum_probs=102.2
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccc-cccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCch
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSG-LLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNN 454 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gsa-Ll~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~ 454 (611)
.+++.+++.|+.+.+ .||..|-|+.|+|.. ...|.. ...+++...+++++||+++| ++|.|...-++ +.+
T Consensus 150 ~~~e~~~~~a~~~~~-~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~--~~~ 222 (404)
T 4e5t_A 150 NDADMAAEAAAKAVD-QGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQF--TVS 222 (404)
T ss_dssp TCHHHHHHHHHHHHH-HTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCB--CHH
T ss_pred CCHHHHHHHHHHHHH-cCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCc--CHH
Confidence 578888887776643 499999999998732 111211 12246777889999999985 56665544444 357
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++.+++++|++.|+++|. |- ..+
T Consensus 223 ~A~~~~~~l~~~~i~~iE-------eP--------------------------------------------------~~~ 245 (404)
T 4e5t_A 223 GAKRLARRLEAYDPLWFE-------EP--------------------------------------------------IPP 245 (404)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CC--------------------------------------------------SCT
T ss_pred HHHHHHHHHhhcCCcEEE-------CC--------------------------------------------------CCc
Confidence 889999999999998764 11 122
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.+++.++++.+. .++||++.+.++|++++.++++.+ .+|.|++--+-.
T Consensus 246 ~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~d~~~~ 293 (404)
T 4e5t_A 246 EKPEDMAEVARY-TSIPVATGERLCTKYEFSRVLETG-AASILQMNLGRV 293 (404)
T ss_dssp TCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHT-CCSEECCCTTTS
T ss_pred ccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhC-CCCEEecCcccc
Confidence 356667776665 589999999999999999999988 799999764443
No 157
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.77 E-value=0.00013 Score=88.39 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=80.2
Q ss_pred ChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc
Q psy9514 422 RANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR 500 (611)
Q Consensus 422 r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~ 500 (611)
.++-+.++|+.+++.. +.||.||+-... .....+..++++|+|+|+|.|.-...+. +-+.
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~-----gi~~~A~~a~~AGAD~IvVsG~eGGTga---sp~~----------- 1036 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRS-----GIGTIAAGVAKANADIILISGNSGGTGA---SPQT----------- 1036 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCT-----THHHHHHHHHHTTCSEEEEECTTCCCSS---EETT-----------
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCC-----ChHHHHHHHHHcCCcEEEEcCCCCCCCC---Cchh-----------
Confidence 3566778999999988 789999976431 1234678899999999999876322110 0000
Q ss_pred CchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhC------CCCcEEEecCCCCHHHHHHHHHcCCCc
Q psy9514 501 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC------SPAPLYGNGDILSYEDYTESLKKSPSI 574 (611)
Q Consensus 501 ~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~------~~iPVIgnGgI~s~eda~~~l~~G~~a 574 (611)
.+. ..+.+....+.++.+.. .++|||+.|||.|..|+.+++..| |
T Consensus 1037 ----------~~~-----------------~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLG--A 1087 (1479)
T 1ea0_A 1037 ----------SIK-----------------FAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLG--A 1087 (1479)
T ss_dssp ----------HHH-----------------HSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTT--C
T ss_pred ----------hhc-----------------CCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcC--C
Confidence 000 12223333444443321 379999999999999999999998 9
Q ss_pred cEEEEcHHhhh
Q psy9514 575 SGVMIGRGALI 585 (611)
Q Consensus 575 D~VmIGRgaL~ 585 (611)
|+|++||++|.
T Consensus 1088 daV~iGTafL~ 1098 (1479)
T 1ea0_A 1088 EEFGIGTASLI 1098 (1479)
T ss_dssp SEEECCHHHHH
T ss_pred CeeeEcHHHHH
Confidence 99999999987
No 158
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.75 E-value=0.0032 Score=63.53 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=41.2
Q ss_pred cHHHHHHHHhhCCC-CcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 536 DWDYIEKCAQLCSP-APLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 536 ~~~~i~~~~k~~~~-iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
+..++..+.+...+ +|||.-|||.+++|+..+++.| +|+|++|.++..
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLG--AdgVlVgSAI~~ 212 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELG--LDAVLVNTAIAE 212 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTT--CCEEEESHHHHT
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcC--CCEEEEChHHhC
Confidence 45667777663457 9999999999999999999998 999999998875
No 159
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=97.74 E-value=0.00027 Score=76.11 Aligned_cols=144 Identities=10% Similarity=0.097 Sum_probs=105.1
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
..++...+.+.+++.+.+.++.+.+ .||..|-| .|+|.... .....+++...+++++||+++| ++|.|..
T Consensus 114 ~v~~y~~~~~~~~e~~~~~a~~~~~-~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDa 185 (405)
T 3rr1_A 114 KMRTYSWVGGDRPADVIAGMKALQA-GGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDF 185 (405)
T ss_dssp CEEEEEECCCSSHHHHHHHHHHHHH-TTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEEC
T ss_pred ceeeeEeCCCCCHHHHHHHHHHHHH-cCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 3556667777899999888887653 49999999 88862110 1122345667889999999985 5666554
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.-++ +.+++.++++.|++.|+.+|. |.
T Consensus 186 N~~~--~~~~A~~~~~~L~~~~i~~iE-------eP-------------------------------------------- 212 (405)
T 3rr1_A 186 HGRV--SAPMAKVLIKELEPYRPLFIE-------EP-------------------------------------------- 212 (405)
T ss_dssp CSCB--CHHHHHHHHHHHGGGCCSCEE-------CS--------------------------------------------
T ss_pred CCCC--CHHHHHHHHHHHHhcCCCEEE-------CC--------------------------------------------
Confidence 4344 357889999999999988763 11
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+++.++++.+. .++||++.+.+.+++++.++++.+ .+|.|++-
T Consensus 213 ------~~~~d~~~~~~l~~~-~~iPIa~dE~i~~~~~~~~~l~~~-a~d~v~~d 259 (405)
T 3rr1_A 213 ------VLAEQAETYARLAAH-THLPIAAGERMFSRFDFKRVLEAG-GVSILQPD 259 (405)
T ss_dssp ------SCCSSTHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHC-CCSEECCB
T ss_pred ------CCcccHHHHHHHHhc-CCCCEEecCCcCCHHHHHHHHHHh-CCCeEEEC
Confidence 123356667776554 589999999999999999999988 79999974
No 160
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=97.74 E-value=0.00022 Score=77.46 Aligned_cols=128 Identities=10% Similarity=0.053 Sum_probs=93.8
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~ 457 (611)
.+++.+.+.|+.+.+ .||+.|.|+.|+ +++...++|++|++++|..+.+.+.....-+.+++.
T Consensus 197 ~~~e~~~~~a~~~~~-~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 259 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVA-DGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAI 259 (441)
T ss_dssp SCHHHHHHHHHHHHH-TTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCHHHHHHHHHHHHH-cCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHH
Confidence 478888888887753 599999998763 367778999999998864443333332212346788
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 537 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~ 537 (611)
++++.|++.|+++|. |. ..+.++
T Consensus 260 ~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d~ 282 (441)
T 2hxt_A 260 DWMRQLAEFDIAWIE-------EP--------------------------------------------------TSPDDV 282 (441)
T ss_dssp HHHHTTGGGCCSCEE-------CC--------------------------------------------------SCTTCH
T ss_pred HHHHHHHhcCCCeee-------CC--------------------------------------------------CCHHHH
Confidence 999999998888653 11 123356
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
+..+++.+...++||++.+.+++++++.++++.+ .+|.|++-
T Consensus 283 ~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 324 (441)
T 2hxt_A 283 LGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAG-AVDLIQID 324 (441)
T ss_dssp HHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHT-CCSEECCC
T ss_pred HHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEeC
Confidence 6666666553369999999999999999999998 79999873
No 161
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=97.72 E-value=0.00013 Score=78.88 Aligned_cols=151 Identities=9% Similarity=-0.016 Sum_probs=104.7
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceecccccc--------------------ccccChHHHH
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGS--------------------GLLQRANILQ 427 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gs--------------------aLl~r~~~l~ 427 (611)
..++...+.+.+++.+.+.++.+.+ .||..|-|..|+|.... .||. .....++...
T Consensus 132 ~v~~y~~~~~~~~e~~~~~a~~~~~-~Gf~~~K~k~G~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~ 207 (418)
T 3r4e_A 132 GIMVYGHANGSDIAETVEAVGHYID-MGYKAIRAQTGVPGIKD---AYGVGRGKLYYEPADASLPSVTGWDTRKALNYVP 207 (418)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHH-TTCSEEEEEECCTTC---------------------CCCCEEEECHHHHHHHHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCccccc---cccccccccccccccccccccccccchhHHHHHH
Confidence 3445555667889998888877643 59999999999973211 1211 1112356778
Q ss_pred HHHHHHHhhcC--CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhh
Q psy9514 428 SVITCMNEVSS--LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNII 505 (611)
Q Consensus 428 eIv~av~~~~~--~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~ 505 (611)
++|++|++++| ++|.|...-++ +.+++.+++++|++.|+.+|. |.
T Consensus 208 ~~v~avR~a~G~d~~l~vDaN~~~--~~~~A~~~~~~L~~~~i~~iE-------qP------------------------ 254 (418)
T 3r4e_A 208 KLFEELRKTYGFDHHLLHDGHHRY--TPQEAANLGKMLEPYQLFWLE-------DC------------------------ 254 (418)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCS--CHHHHHHHHHHHGGGCCSEEE-------SC------------------------
T ss_pred HHHHHHHHHcCCCCeEEEeCCCCC--CHHHHHHHHHHHHhhCCCEEE-------CC------------------------
Confidence 89999999986 45555544344 457899999999999998874 21
Q ss_pred hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHh
Q psy9514 506 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGA 583 (611)
Q Consensus 506 ~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRga 583 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-
T Consensus 255 --------------------------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-a~d~v~~k~~~ 304 (418)
T 3r4e_A 255 --------------------------TPAENQEAFRLVRQH-TVTPLAVGEIFNTIWDAKDLIQNQ-LIDYIRATVVG 304 (418)
T ss_dssp --------------------------SCCSSGGGGHHHHHH-CCSCEEECTTCCSGGGTHHHHHTT-CCSEECCCTTT
T ss_pred --------------------------CCccCHHHHHHHHhc-CCCCEEEcCCcCCHHHHHHHHHcC-CCCeEecCccc
Confidence 112234445555554 589999999999999999999998 79999986443
No 162
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.72 E-value=0.00035 Score=75.32 Aligned_cols=142 Identities=10% Similarity=0.118 Sum_probs=101.6
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccc-cccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCc
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSG-LLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDN 453 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gsa-Ll~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~ 453 (611)
..+++.+++.|+.+.+ .||..|-|+.|+|.. ...|.. ...+++...+++++||+++|. +|.|...-++ +.
T Consensus 142 ~~~~e~~~~~a~~~~~-~G~~~iKlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~--~~ 214 (412)
T 4e4u_A 142 YDDPDLAAECAAENVK-LGFTAVKFDPAGPYT----AYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQM--VP 214 (412)
T ss_dssp SSCHHHHHHHHHHHHH-HTCSEEEECCSCCCB----TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCB--CH
T ss_pred CCCHHHHHHHHHHHHH-cCCCEEEECCCCCCc----cccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCC--CH
Confidence 3588888887776643 499999999998732 111211 112366778899999999864 5554433333 45
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccC
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTK 533 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~ 533 (611)
+++.+++++|++.|+.+|. |. ..
T Consensus 215 ~~A~~~~~~L~~~~i~~iE-------eP--------------------------------------------------~~ 237 (412)
T 4e4u_A 215 SSAIRLAKRLEKYDPLWFE-------EP--------------------------------------------------VP 237 (412)
T ss_dssp HHHHHHHHHHGGGCCSEEE-------CC--------------------------------------------------SC
T ss_pred HHHHHHHHHhhhcCCcEEE-------CC--------------------------------------------------CC
Confidence 7889999999999988764 11 22
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-+
T Consensus 238 ~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~d~~~~ 286 (412)
T 4e4u_A 238 PGQEEAIAQVAKH-TSIPIATGERLTTKYEFHKLLQAG-GASILQLNVARV 286 (412)
T ss_dssp SSCHHHHHHHHHT-CSSCEEECTTCCHHHHHHHHHHTT-CCSEECCCTTTT
T ss_pred hhhHHHHHHHHhh-CCCCEEecCccCCHHHHHHHHHcC-CCCEEEeCcccc
Confidence 3356777777654 589999999999999999999998 799999854433
No 163
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=97.72 E-value=0.00026 Score=76.03 Aligned_cols=163 Identities=10% Similarity=-0.014 Sum_probs=110.0
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCcccee----cc--ccccccc--cChHHHHHHHHHHHhhcC--
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIY----KQ--GSGSGLL--QRANILQSVITCMNEVSS-- 438 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~----~~--g~GsaLl--~r~~~l~eIv~av~~~~~-- 438 (611)
.++...+.+.+++.+.+.++.+.+ .||..|-|..|++-.... .+ .-|..+. ..++...+++++||+++|
T Consensus 123 v~~y~~~~~~~~e~~~~~a~~~~~-~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d 201 (401)
T 3sbf_A 123 IPVYTHATSDTMEGIYDLVEGFLE-KGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQ 201 (401)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHH-TTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCC
Confidence 445555677889988888877653 499999999987411000 00 0122221 225677889999999986
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCc
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGAS 518 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~ 518 (611)
++|.|...-++ +.+++.++++.|++.|+.+|. |.
T Consensus 202 ~~l~vDan~~~--~~~~A~~~~~~L~~~~i~~iE-------qP------------------------------------- 235 (401)
T 3sbf_A 202 FHILHDVHERL--FPNQAIQFAKEVEQYKPYFIE-------DI------------------------------------- 235 (401)
T ss_dssp SEEEEECTTCS--CHHHHHHHHHHHGGGCCSCEE-------CS-------------------------------------
T ss_pred CEEEEECCCCC--CHHHHHHHHHHHHhcCCCEEE-------CC-------------------------------------
Confidence 45555544444 457899999999999988763 11
Q ss_pred eEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 519 LITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 519 ~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-+--..-+.+|
T Consensus 236 -------------~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GGit~~~ki 295 (401)
T 3sbf_A 236 -------------LPPNQTEWLDNIRSQ-SSVSLGLGELFNNPEEWKSLIANR-RIDFIRCHVSQIGGITPALKL 295 (401)
T ss_dssp -------------SCTTCGGGHHHHHTT-CCCCEEECTTCCSHHHHHHHHHTT-CCSEECCCGGGGTSHHHHHHH
T ss_pred -------------CChhHHHHHHHHHhh-CCCCEEeCCccCCHHHHHHHHhcC-CCCEEecCccccCCHHHHHHH
Confidence 122344555665554 589999999999999999999998 799999865554444333333
No 164
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.71 E-value=0.00028 Score=71.17 Aligned_cols=146 Identities=12% Similarity=0.075 Sum_probs=99.6
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhh--
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNII-- 505 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~-- 505 (611)
+-++.+++.+++||..|=- .-+..++.. +..+|+|+|.+....... ..+.++.+..++.....
T Consensus 91 ~dL~~ir~~v~lPvLrKDf------i~~~~qi~e-a~~~GAD~ilLi~a~l~~--------~~l~~l~~~a~~lGl~~lv 155 (251)
T 1i4n_A 91 AFVRAARNLTCRPILAKDF------YIDTVQVKL-ASSVGADAILIIARILTA--------EQIKEIYEAAEELGMDSLV 155 (251)
T ss_dssp HHHHHHHTTCCSCEEEECC------CCSTHHHHH-HHHTTCSEEEEEGGGSCH--------HHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHhCCCCEEEeeC------CCCHHHHHH-HHHcCCCEEEEecccCCH--------HHHHHHHHHHHHcCCeEEE
Confidence 4557788888999986621 112234443 889999999998875332 23445555444433321
Q ss_pred ----hhcchhhHhc-CCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 506 ----HNFMPKFRDW-GASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 506 ----~~~~~~l~~~-G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.+-+....+. |++.|-++-|.-. +-..+++...++++..+ ++++|+.|||+|++|+.++... +|+|.|
T Consensus 156 Ev~~~eE~~~A~~l~g~~iIGinnr~l~---t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~---a~avLV 229 (251)
T 1i4n_A 156 EVHSREDLEKVFSVIRPKIIGINTRDLD---TFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK---VNAVLV 229 (251)
T ss_dssp EECSHHHHHHHHTTCCCSEEEEECBCTT---TCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT---CSEEEE
T ss_pred EeCCHHHHHHHHhcCCCCEEEEeCcccc---cCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh---CCEEEE
Confidence 1223455667 9999988776432 23456777777776654 4899999999999999998764 899999
Q ss_pred cHHhhhCCchHHHHH
Q psy9514 580 GRGALIKPWIFQEIK 594 (611)
Q Consensus 580 GRgaL~dP~lf~ei~ 594 (611)
|.+++.-+++-..++
T Consensus 230 G~aimr~~d~~~~~~ 244 (251)
T 1i4n_A 230 GTSIMKAENPRRFLE 244 (251)
T ss_dssp CHHHHHCSSHHHHHH
T ss_pred cHHHcCCcCHHHHHH
Confidence 999998887766554
No 165
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.71 E-value=0.00011 Score=89.31 Aligned_cols=116 Identities=13% Similarity=0.087 Sum_probs=80.1
Q ss_pred ChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc
Q psy9514 422 RANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR 500 (611)
Q Consensus 422 r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~ 500 (611)
+++-+.++|+.+++.. +.||.||+-... .....+..++++|+|+|+|.|.-...+ -+-+.
T Consensus 1011 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~-----gi~~~A~~a~kAGAD~IvVsG~eGGTg---asp~~----------- 1071 (1520)
T 1ofd_A 1011 SIEDLAQLIYDLHQINPEAQVSVKLVAEI-----GIGTIAAGVAKANADIIQISGHDGGTG---ASPLS----------- 1071 (1520)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEEEEEECST-----THHHHHHHHHHTTCSEEEEECTTCCCS---SEEHH-----------
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEecCCC-----ChHHHHHHHHHcCCCEEEEeCCCCccC---CCcch-----------
Confidence 3566778999999988 799999976431 123467789999999999987642221 00000
Q ss_pred CchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhC------CCCcEEEecCCCCHHHHHHHHHcCCCc
Q psy9514 501 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC------SPAPLYGNGDILSYEDYTESLKKSPSI 574 (611)
Q Consensus 501 ~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~------~~iPVIgnGgI~s~eda~~~l~~G~~a 574 (611)
.+. ..+.+....+.++.+.. .++|||+.|||.|..|+.+++..| |
T Consensus 1072 ----------~~~-----------------~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLG--A 1122 (1520)
T 1ofd_A 1072 ----------SIK-----------------HAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMG--A 1122 (1520)
T ss_dssp ----------HHH-----------------HBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTT--C
T ss_pred ----------hhc-----------------CCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcC--C
Confidence 001 11222233344433221 269999999999999999999998 9
Q ss_pred cEEEEcHHhhh
Q psy9514 575 SGVMIGRGALI 585 (611)
Q Consensus 575 D~VmIGRgaL~ 585 (611)
|+|++||++|.
T Consensus 1123 daV~iGTafL~ 1133 (1520)
T 1ofd_A 1123 EEYGFGSIAMI 1133 (1520)
T ss_dssp SEEECSHHHHH
T ss_pred CeeEEcHHHHH
Confidence 99999999987
No 166
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.71 E-value=3.8e-06 Score=72.87 Aligned_cols=59 Identities=20% Similarity=0.545 Sum_probs=46.2
Q ss_pred CcccCCcccccCCCCCCCCCCC-CCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCcc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGE-KCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGSS 136 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~-~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~ 136 (611)
+....|..|.++ .|..|| .|+|+|+....+..-.+.-...|.+|.. |.|..| +|+|...
T Consensus 18 ~k~~VCr~FlrG----~C~rgd~~C~FsH~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~ 77 (98)
T 2e5s_A 18 DKLEVCREFQRG----NCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIK-GRCMRE-KCKYFHP 77 (98)
T ss_dssp SEEEBCSHHHHT----CCSSHHHHCSSBCCSSCCSCCTTTCEEEBCHHHHH-TCCCCT-TCCSBCC
T ss_pred hhhhhhHHHhcC----cCCCCCCCCCCcCCchhccccccCCccccchhhcc-CCCCCC-CcCccCC
Confidence 568899999996 599999 7999999875432212233569999955 999999 9999953
No 167
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.70 E-value=0.00015 Score=71.23 Aligned_cols=173 Identities=15% Similarity=0.103 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~ 457 (611)
+.+...+.++.+. .|+|.+|+.+ |. ... +| .++|+.+++.. +.|+.+-+.+- +. + .
T Consensus 17 ~~~~~~~~~~~~~--~~vd~ie~g~--~~--~~~--~G----------~~~i~~lr~~~~~~~i~ld~~l~--d~-p--~ 73 (218)
T 3jr2_A 17 NLTDAVAVASNVA--SYVDVIEVGT--IL--AFA--EG----------MKAVSTLRHNHPNHILVCDMKTT--DG-G--A 73 (218)
T ss_dssp SHHHHHHHHHHHG--GGCSEEEECH--HH--HHH--HT----------THHHHHHHHHCTTSEEEEEEEEC--SC-H--H
T ss_pred CHHHHHHHHHHhc--CCceEEEeCc--HH--HHh--cC----------HHHHHHHHHhCCCCcEEEEEeec--cc-H--H
Confidence 5667777777653 4899999874 21 111 12 36788888773 55665443332 22 2 2
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch---------hhhhcchhhHhcCCceEEe-ccccc
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN---------IIHNFMPKFRDWGASLITL-HGRTR 527 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~---------~~~~~~~~l~~~G~~~iti-hgrtr 527 (611)
.+++.+.++|++.|++|+-.... .+..+.+.+++... .+..-+..+.+.|++.+.+ .+.+.
T Consensus 74 ~~~~~~~~aGad~i~vh~~~~~~---------~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~ 144 (218)
T 3jr2_A 74 ILSRMAFEAGADWITVSAAAHIA---------TIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDA 144 (218)
T ss_dssp HHHHHHHHHTCSEEEEETTSCHH---------HHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHH
T ss_pred HHHHHHHhcCCCEEEEecCCCHH---------HHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceeeeecccc
Confidence 47788999999999999865321 12223222222111 1112233455669998754 44332
Q ss_pred c--ccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 528 E--QRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 528 ~--g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
. |....+..+..++++.. .++||+..||| +++.+.++++.| +|+|.+||++...++
T Consensus 145 ~~~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI-~~~~~~~~~~aG--Ad~vvvGsaI~~a~d 202 (218)
T 3jr2_A 145 ELAGIGWTTDDLDKMRQLSA--LGIELSITGGI-VPEDIYLFEGIK--TKTFIAGRALAGAEG 202 (218)
T ss_dssp HHHTCCSCHHHHHHHHHHHH--TTCEEEEESSC-CGGGGGGGTTSC--EEEEEESGGGSHHHH
T ss_pred ccCCCcCCHHHHHHHHHHhC--CCCCEEEECCC-CHHHHHHHHHcC--CCEEEEchhhcCCCC
Confidence 2 11112223455555543 47999999999 599999999987 999999999886443
No 168
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.68 E-value=0.002 Score=63.99 Aligned_cols=188 Identities=10% Similarity=0.070 Sum_probs=112.9
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccce--EEeccCCCccceeccccccccccChHHHHHHHHHHHhh--cCCCEEEEEE
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDF--VDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEV--SSLPITVKTR 446 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~--IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~--~~~PvtVKiR 446 (611)
+.-+|...+...+.+..+.+.+ .|.|. ||+--|+=.+|. .+| ..+++++++. .+.|+.|.+-
T Consensus 7 i~psil~~D~~~l~~~i~~l~~-~g~d~~h~DVmDg~Fvpn~---~~G----------~~~v~~ir~~~~~~~~~dvhLm 72 (228)
T 3ovp_A 7 IGPSILNSDLANLGAECLRMLD-SGADYLHLDVMDGHFVPNI---TFG----------HPVVESLRKQLGQDPFFDMHMM 72 (228)
T ss_dssp EEEBCTTSCGGGHHHHHHHHHH-TTCSCEEEEEEBSSSSSCB---CBC----------HHHHHHHHHHHCSSSCEEEEEE
T ss_pred eeeeheeCCchhHHHHHHHHHH-cCCCEEEEEecCCCcCccc---ccC----------HHHHHHHHHhhCCCCcEEEEEE
Confidence 4456666777777777777753 45654 344334411112 233 4678888887 4789988877
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcCC
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWGA 517 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G~ 517 (611)
+.. + ..+++.+.++|+|.||+|.-.... +..+.+.+++...+ ..+.+..+.+ .+
T Consensus 73 v~~----p--~~~i~~~~~aGad~itvH~Ea~~~----------~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~-~~ 135 (228)
T 3ovp_A 73 VSK----P--EQWVKPMAVAGANQYTFHLEATEN----------PGALIKDIRENGMKVGLAIKPGTSVEYLAPWAN-QI 135 (228)
T ss_dssp CSC----G--GGGHHHHHHHTCSEEEEEGGGCSC----------HHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGG-GC
T ss_pred eCC----H--HHHHHHHHHcCCCEEEEccCCchh----------HHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhc-cC
Confidence 521 1 246778889999999999743211 11222222221111 1112222222 36
Q ss_pred ceEEeccccc---cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 518 SLITLHGRTR---EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 518 ~~itihgrtr---~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
++|.+..... -+.+ .+..++.++++.+...+++|..-||| +++.+.++++.| +|.+++||+++..++.-+.+
T Consensus 136 D~Vl~msv~pGf~Gq~f-~~~~l~ki~~lr~~~~~~~I~VdGGI-~~~t~~~~~~aG--Ad~~VvGsaIf~a~dp~~~~ 210 (228)
T 3ovp_A 136 DMALVMTVEPGFGGQKF-MEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAG--ANMIVSGSAIMRSEDPRSVI 210 (228)
T ss_dssp SEEEEESSCTTTCSCCC-CGGGHHHHHHHHHHCTTCEEEEESSC-STTTHHHHHHHT--CCEEEESHHHHTCSCHHHHH
T ss_pred CeEEEeeecCCCCCccc-CHHHHHHHHHHHHhcCCCCEEEeCCc-CHHHHHHHHHcC--CCEEEEeHHHhCCCCHHHHH
Confidence 7775533321 1111 23356667777766667899999999 589999999998 99999999999766554433
No 169
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=97.67 E-value=0.00047 Score=73.68 Aligned_cols=126 Identities=12% Similarity=0.103 Sum_probs=95.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.+.+.|+.+.+ .||+.|.|+.|++ +++...++|++|+++++ +++.+...-++ +.+++
T Consensus 165 ~~~~~~~~a~~~~~-~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~--~~~~a 226 (392)
T 1tzz_A 165 GLSMLRGEMRGYLD-RGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRF--NLETG 226 (392)
T ss_dssp CHHHHHHHHHHHHT-TTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCC--CHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCC--CHHHH
Confidence 78888888877653 5999999998873 35777899999999885 45555544344 34778
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+++|. |. ..+.+
T Consensus 227 ~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d 249 (392)
T 1tzz_A 227 IAYAKMLRDYPLFWYE-------EV--------------------------------------------------GDPLD 249 (392)
T ss_dssp HHHHHHHTTSCCSEEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHHHcCCCeec-------CC--------------------------------------------------CChhh
Confidence 8999999999988763 21 12346
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCC---CccEEEEc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSP---SISGVMIG 580 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~---~aD~VmIG 580 (611)
|+.++++.+. .++||++.+.+++++++.++++.++ .+|.|++-
T Consensus 250 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 250 YALQAALAEF-YPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp HHHHHHHTTT-CCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred HHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 6777776554 5899999999999999999998741 49999984
No 170
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.64 E-value=0.00059 Score=66.75 Aligned_cols=172 Identities=10% Similarity=-0.003 Sum_probs=107.2
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.+++.-+.+.+++++.+.++.+. ..|++.|||..-+|. ..+.++.+++ ..+.+.. |
T Consensus 13 ~~ii~vi~~~~~~~~~~~~~~l~-~gGv~~iel~~k~~~------------------~~~~i~~~~~---~~~~~ga--g 68 (207)
T 2yw3_A 13 SRLLPLLTVRGGEDLLGLARVLE-EEGVGALEITLRTEK------------------GLEALKALRK---SGLLLGA--G 68 (207)
T ss_dssp HCEEEEECCCSCCCHHHHHHHHH-HTTCCEEEEECSSTH------------------HHHHHHHHTT---SSCEEEE--E
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH-HcCCCEEEEeCCChH------------------HHHHHHHHhC---CCCEEEe--C
Confidence 45666677778888888887775 358999999876661 2355666665 2333332 2
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-cccC-chhhhhcchhhHhcCCceEEecccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-CSRD-NNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-~~~~-~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
.--. .+-++.+.++|++.|+..+.. ...+..+..+ ++.. .-.+.+.+....+.|++.+.++.-
T Consensus 69 ~vl~----~d~~~~A~~~GAd~v~~~~~d----------~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~fpa- 133 (207)
T 2yw3_A 69 TVRS----PKEAEAALEAGAAFLVSPGLL----------EEVAALAQARGVPYLPGVLTPTEVERALALGLSALKFFPA- 133 (207)
T ss_dssp SCCS----HHHHHHHHHHTCSEEEESSCC----------HHHHHHHHHHTCCEEEEECSHHHHHHHHHTTCCEEEETTT-
T ss_pred eEee----HHHHHHHHHcCCCEEEcCCCC----------HHHHHHHHHhCCCEEecCCCHHHHHHHHHCCCCEEEEecC-
Confidence 2111 144666778899998643321 1222222221 0000 001122234456789999988651
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.......+++.+.....++||++.|||+ ++++.+++..| +++|.+|++++. ++
T Consensus 134 -----~~~gG~~~lk~l~~~~~~ipvvaiGGI~-~~n~~~~l~aG--a~~vavgSai~~-~d 186 (207)
T 2yw3_A 134 -----EPFQGVRVLRAYAEVFPEVRFLPTGGIK-EEHLPHYAALP--NLLAVGGSWLLQ-GN 186 (207)
T ss_dssp -----TTTTHHHHHHHHHHHCTTCEEEEBSSCC-GGGHHHHHTCS--SBSCEEESGGGS-SC
T ss_pred -----ccccCHHHHHHHHhhCCCCcEEEeCCCC-HHHHHHHHhCC--CcEEEEehhhhC-CC
Confidence 1111357788777666689999999996 79999999997 999999998876 44
No 171
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=97.61 E-value=0.00078 Score=71.03 Aligned_cols=146 Identities=12% Similarity=0.128 Sum_probs=105.4
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRT 447 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~ 447 (611)
+....+...+++.+.+.++.+. ..||..|-|+.|++ ++.-.+++++|+++++. ++.|...-
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~-~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~ 192 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKV-KLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQ 192 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeeEEeCCCCHHHHHHHHHHHH-HhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 3344556678888887777654 35999999998765 24457889999998864 45554433
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
++ +.+++.++++.|++.|+.+|. |-
T Consensus 193 ~~--~~~~a~~~~~~L~~~~i~~iE-------qP---------------------------------------------- 217 (354)
T 3jva_A 193 AW--TPKDAVKAIQALADYQIELVE-------QP---------------------------------------------- 217 (354)
T ss_dssp CS--CHHHHHHHHHHTTTSCEEEEE-------CC----------------------------------------------
T ss_pred CC--CHHHHHHHHHHHHhcCCCEEE-------CC----------------------------------------------
Confidence 44 457788999999998887764 11
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+.+-...-+.+|
T Consensus 218 ----~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 218 ----VKRRDLEGLKYVTSQ-VNTTIMADESCFDAQDALELVKKG-TVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp ----SCTTCHHHHHHHHHH-CSSEEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHH
T ss_pred ----CChhhHHHHHHHHHh-CCCCEEEcCCcCCHHHHHHHHHcC-CCCEEEECchhcCCHHHHHHH
Confidence 223356677776655 489999999999999999999987 799999987666555444443
No 172
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.57 E-value=0.00063 Score=67.88 Aligned_cols=54 Identities=19% Similarity=0.176 Sum_probs=46.9
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
..+.++++++.+...++||+..|||+|++++.++++ | ||+|+||.+++.+|.-+
T Consensus 175 ~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-g--Ad~VIVGSa~v~~~~~~ 228 (234)
T 2f6u_A 175 YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-Y--ADTIIVGNVIYEKGIDA 228 (234)
T ss_dssp CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-H--SSEEEECHHHHHHCHHH
T ss_pred cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-C--CCEEEEChHHHhCHHHH
Confidence 447888998877643899999999999999999988 8 99999999999998643
No 173
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.54 E-value=0.0014 Score=65.21 Aligned_cols=179 Identities=13% Similarity=0.163 Sum_probs=111.8
Q ss_pred eeecccCchHHHHHHHHHHHHhcccce--EEeccCC--CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 372 GVQLCGNNPYVLTKCTQLLEEQMVVDF--VDVNLGC--PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 372 ivQi~g~~p~~~~~aA~~l~~~~g~D~--IELN~gC--P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
..++...+...+.+..+.+ ..|+|. ||+--|+ | |. .+| ..+++++++.++.|+.+-+-+
T Consensus 4 ~pSila~D~~~l~~~i~~~--~~gad~lHvDvmDG~fvp--n~---t~G----------~~~v~~lr~~~~~~~dvhLmv 66 (231)
T 3ctl_A 4 SPSLMCMDLLKFKEQIEFI--DSHADYFHIDIMDGHFVP--NL---TLS----------PFFVSQVKKLATKPLDCHLMV 66 (231)
T ss_dssp EEBGGGSCGGGHHHHHHHH--HTTCSCEEEEEECSSSSS--CC---CBC----------HHHHHHHHTTCCSCEEEEEES
T ss_pred EeehhhCChhhHHHHHHHH--HcCCCEEEEEEEeCccCc--cc---hhc----------HHHHHHHHhccCCcEEEEEEe
Confidence 3456666776777777777 357776 4554565 4 21 223 468899998888898888765
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccc-cccccccCcChhHHHHHhhhcccCchh--------h-hhcchhhHhcCC
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRT-REQRYTKQADWDYIEKCAQLCSRDNNI--------I-HNFMPKFRDWGA 517 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~-r~qr~~~~adw~~i~~~~~~~~~~~~~--------~-~~~~~~l~~~G~ 517 (611)
. + + ..+++.+.++|++.||+|.-. .. .+..+.+.+++...+ + .+.+..+. .++
T Consensus 67 ~---d-p--~~~i~~~~~aGAd~itvh~Ea~~~----------~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l-~~~ 129 (231)
T 3ctl_A 67 T---R-P--QDYIAQLARAGADFITLHPETING----------QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYI-HKA 129 (231)
T ss_dssp S---C-G--GGTHHHHHHHTCSEEEECGGGCTT----------THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTG-GGC
T ss_pred c---C-H--HHHHHHHHHcCCCEEEECcccCCc----------cHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHH-hcC
Confidence 3 1 1 246788999999999999743 21 122333333332221 1 12222222 268
Q ss_pred ceEEe---ccccccccccCCccHHHHHHHHhhC----CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc-HHhhhCCc
Q psy9514 518 SLITL---HGRTREQRYTKQADWDYIEKCAQLC----SPAPLYGNGDILSYEDYTESLKKSPSISGVMIG-RGALIKPW 588 (611)
Q Consensus 518 ~~iti---hgrtr~g~~~~~a~~~~i~~~~k~~----~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG-RgaL~dP~ 588 (611)
+.|.+ +..+..+.+ .+..++.|+++.+.. .+++|..-|||+ ++.+.++++.| +|.+++| ++++..++
T Consensus 130 D~VlvmsV~pGfggQ~f-~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aG--Ad~~V~G~saif~~~d 204 (231)
T 3ctl_A 130 DKITVMTVDPGFAGQPF-IPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAG--ADVFIVGTSGLFNHAE 204 (231)
T ss_dssp SEEEEESSCTTCSSCCC-CTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHT--CCEEEECTTTTGGGCS
T ss_pred CEEEEeeeccCcCCccc-cHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcC--CCEEEEccHHHhCCCC
Confidence 88864 333332222 334455555554332 268899999995 88999999998 9999999 99987655
No 174
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=97.51 E-value=0.00051 Score=74.34 Aligned_cols=163 Identities=9% Similarity=-0.026 Sum_probs=108.2
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccce-----e-ccccccccc--cChHHHHHHHHHHHhhcCC-
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFI-----Y-KQGSGSGLL--QRANILQSVITCMNEVSSL- 439 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v-----~-~~g~GsaLl--~r~~~l~eIv~av~~~~~~- 439 (611)
.++...+.+.+++.+.+.++.+.+ .||..|-|..|.+-... . ...-|..+. ..++...+++++||+++|.
T Consensus 144 v~~y~~~~~~~~e~~~~~a~~~~~-~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 144 IPAYSHASGETLEALFASVDALIA-QGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHH-TTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHH-cCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 444445567889988888777643 49999999988741000 0 000111111 1256778899999999864
Q ss_pred -CEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCc
Q psy9514 440 -PITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGAS 518 (611)
Q Consensus 440 -PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~ 518 (611)
+|.|...-++ +.+++..++++|++.|+.+|. |.
T Consensus 223 ~~L~vDaN~~~--~~~~A~~~~~~Le~~~i~~iE-------qP------------------------------------- 256 (422)
T 3tji_A 223 LHILHDVHERL--FPQQAVQLAKQLEPFQPYFIE-------DI------------------------------------- 256 (422)
T ss_dssp SEEEEECTTCS--CHHHHHHHHHHHGGGCCSEEE-------CC-------------------------------------
T ss_pred CEEEEECCCCC--CHHHHHHHHHHHHhhCCCeEE-------CC-------------------------------------
Confidence 5555443344 457899999999999988764 11
Q ss_pred eEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 519 LITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 519 ~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-.-...-+.+|
T Consensus 257 -------------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~ll~~g-a~d~v~~k~~~~GGit~~~ki 316 (422)
T 3tji_A 257 -------------LPPQQSAWLEQVRQQ-SCVPLALGELFNNPAEWHDLIVNR-RIDFIRCHVSQIGGITPALKL 316 (422)
T ss_dssp -------------SCGGGGGGHHHHHHH-CCCCEEECTTCCSGGGTHHHHHTT-CCSEECCCGGGGTSHHHHHHH
T ss_pred -------------CChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHhcC-CCCEEecCccccCCHHHHHHH
Confidence 112244455665554 589999999999999999999998 799999865554444433333
No 175
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.51 E-value=0.0033 Score=62.41 Aligned_cols=186 Identities=15% Similarity=0.115 Sum_probs=118.3
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccce--EEeccCC--CccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEE
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDF--VDVNLGC--PIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKT 445 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~--IELN~gC--P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKi 445 (611)
+..++...+...+.+..+.+. ..|+|. ||+--|+ | .. .+| ..+++++++.+ +.|+-+-+
T Consensus 8 i~pSila~D~~~l~~~i~~~~-~~g~d~iHvDvmDg~fvp---n~--t~G----------~~~v~~lr~~~p~~~~dvhL 71 (227)
T 1tqx_A 8 IAPSVLASNISKLAEETQRME-SLGAEWIHLDVMDMHFVP---NL--SFG----------PPVINNLKKYTKSIFFDVHL 71 (227)
T ss_dssp EEEBGGGSCGGGHHHHHHHHH-HTTCSEEEEEEEBSSSSS---CB--CCC----------HHHHHHHGGGCSSCEEEEEE
T ss_pred EEeehhcCChhhHHHHHHHHH-HcCCCEEEEEEEeCCcCc---ch--hcC----------HHHHHHHHHhCCCCcEEEEE
Confidence 456777777777777777775 347776 4554565 4 21 223 47889999988 78888887
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhh---hcccCchh---------hhhcchhhH
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQ---LCSRDNNI---------IHNFMPKFR 513 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~---~~~~~~~~---------~~~~~~~l~ 513 (611)
-+...+ .++..+.+ ++.+|+|.-.... .+..+.+ .+++...+ ..+.+..+.
T Consensus 72 mv~dp~------~~i~~~~~--Ad~itvH~ea~~~---------~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l 134 (227)
T 1tqx_A 72 MVEYPE------KYVPLLKT--SNQLTFHFEALNE---------DTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPIL 134 (227)
T ss_dssp ESSCGG------GGGGGCTT--SSEEEEEGGGGTT---------CHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHH
T ss_pred EEcCHH------HHHHHHHh--CCEEEEeecCCcc---------CHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHh
Confidence 763211 23344444 8999999865320 1223333 33332221 123344455
Q ss_pred hcC-CceEEe---ccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 514 DWG-ASLITL---HGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 514 ~~G-~~~iti---hgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
+.| +++|.+ +.....+.+ .+..++-++++.+...+++|..-|||+ ++.+.++++.| +|.+++|++++..++.
T Consensus 135 ~~g~~D~VlvmsV~pGf~gq~f-~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~aG--Ad~~V~GsaIf~~~d~ 210 (227)
T 1tqx_A 135 DTNLINTVLVMTVEPGFGGQSF-MHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISASHG--ANIIVAGTSIFNAEDP 210 (227)
T ss_dssp TTTCCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHHHT--CCEEEESHHHHTCSSH
T ss_pred hcCCcCEEEEeeeccCCCCccc-chHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHHcC--CCEEEEeHHHhCCCCH
Confidence 555 999944 443333322 344577777776655578999999995 89999999998 9999999999986664
Q ss_pred HHHH
Q psy9514 590 FQEI 593 (611)
Q Consensus 590 f~ei 593 (611)
-+.+
T Consensus 211 ~~~i 214 (227)
T 1tqx_A 211 KYVI 214 (227)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 176
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.51 E-value=0.00032 Score=77.61 Aligned_cols=124 Identities=17% Similarity=0.109 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc-C-----chhhhhcchhhHhcCCceEEecccc--
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR-D-----NNIIHNFMPKFRDWGASLITLHGRT-- 526 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~-~-----~~~~~~~~~~l~~~G~~~itihgrt-- 526 (611)
...+.++.+.+.|+++|.++....... -.|+.|..+....+. . +....+.+..+.++|++.+.+ |..
T Consensus 242 ~~~e~~~~l~e~gv~~l~Vd~~~g~~~----~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V-g~~~g 316 (503)
T 1me8_A 242 DFRERVPALVEAGADVLCIDSSDGFSE----WQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKI-GIGGG 316 (503)
T ss_dssp SHHHHHHHHHHHTCSEEEECCSCCCSH----HHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEE-CSSCS
T ss_pred hHHHHHHHHHhhhccceEEecccCccc----chhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEe-cccCC
Confidence 345667888888999998865422111 134455555544321 1 112234566788999999977 431
Q ss_pred -----ccccccCCccHHHHHHHHhhCC--------CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 527 -----REQRYTKQADWDYIEKCAQLCS--------PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 527 -----r~g~~~~~a~~~~i~~~~k~~~--------~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
+.-.-.+.+....+.++++... ++|||+.|||.++.|+.+++..| ||+||||+.++.
T Consensus 317 ~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalG--A~~V~iG~~~~~ 386 (503)
T 1me8_A 317 SICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMG--ADFIMLGRYFAR 386 (503)
T ss_dssp TTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHT
T ss_pred cCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcC--CCEEEECchhhc
Confidence 1111123445566666654322 69999999999999999999998 999999998874
No 177
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=97.50 E-value=0.0015 Score=69.28 Aligned_cols=125 Identities=12% Similarity=0.087 Sum_probs=93.9
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.+.+.++.+.+..||..|-|..|++ ++..-.+++++|++++| .++.|...-++ +.+++
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~--~~~~a 213 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAIDGNGKW--DLPTC 213 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCC--CHHHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCC--CHHHH
Confidence 7888877777665444999999998875 24455788999999986 45555544444 35778
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+.+|. |- ..+.+
T Consensus 214 ~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d 236 (372)
T 3tj4_A 214 QRFCAAAKDLDIYWFE-------EP--------------------------------------------------LWYDD 236 (372)
T ss_dssp HHHHHHTTTSCEEEEE-------SC--------------------------------------------------SCTTC
T ss_pred HHHHHHHhhcCCCEEE-------CC--------------------------------------------------CCchh
Confidence 8999999988877653 11 22345
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++
T Consensus 237 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~ 277 (372)
T 3tj4_A 237 VTSHARLARN-TSIPIALGEQLYTVDAFRSFIDAG-AVAYVQP 277 (372)
T ss_dssp HHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECC
T ss_pred HHHHHHHHhh-cCCCEEeCCCccCHHHHHHHHHcC-CCCEEEe
Confidence 6777777665 489999999999999999999998 7999987
No 178
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.50 E-value=0.0016 Score=66.73 Aligned_cols=128 Identities=11% Similarity=-0.018 Sum_probs=85.4
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc-CCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH-KDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~-~~~~~a~~la~~l~~aGvd~It 472 (611)
.|+|.||+.. .+|..+..+.+.+.+-|++|++.++.| .+|+=+-.. -+.+.....++...++|+|+|-
T Consensus 138 ~GAdEIDmVI----------Nig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVK 206 (288)
T 3oa3_A 138 NGASELDMVM----------NYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVK 206 (288)
T ss_dssp TTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEEe----------ehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 4999999631 135555678888999999999988766 356543211 1234455677778899999986
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhh-CCCCc
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-CSPAP 551 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~-~~~iP 551 (611)
.+-+.... -.-..+...++++++. ..+++
T Consensus 207 TSTGf~~~--------------------------------------------------GAT~edv~lmr~~v~~~g~~v~ 236 (288)
T 3oa3_A 207 TSTGFNGP--------------------------------------------------GASIENVSLMSAVCDSLQSETR 236 (288)
T ss_dssp CCCSSSSC--------------------------------------------------CCCHHHHHHHHHHHHHSSSCCE
T ss_pred cCCCCCCC--------------------------------------------------CCCHHHHHHHHHHHHHhCCCce
Confidence 54221000 0111244556666543 25799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCcc--EEEEcHHhh
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSIS--GVMIGRGAL 584 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD--~VmIGRgaL 584 (611)
|.+.|||.|++++.++++.| ++ |+..|+.++
T Consensus 237 VKAAGGIrt~edAl~mi~aG--A~RiGtS~g~~I~ 269 (288)
T 3oa3_A 237 VKASGGIRTIEDCVKMVRAG--AERLGASAGVKIV 269 (288)
T ss_dssp EEEESSCCSHHHHHHHHHTT--CSEEEESCHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHcC--CceeehhhHHHHH
Confidence 99999999999999999998 99 666665544
No 179
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.49 E-value=0.002 Score=64.80 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=97.5
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI--- 504 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~--- 504 (611)
+-++.+++.+++||.-| +-.-+-.++ -....+|+|+|-+....-... .+.++.++.......
T Consensus 94 ~~L~~vr~~v~lPvLrK------DFiid~yQI-~eAr~~GADaILLI~a~L~~~--------~l~~l~~~A~~lGl~~Lv 158 (258)
T 4a29_A 94 ETLRKIASSVSIPILMS------DFIVKESQI-DDAYNLGADTVLLIVKILTER--------ELESLLEYARSYGMEPLI 158 (258)
T ss_dssp HHHHHHHTTCSSCEEEE------SCCCSHHHH-HHHHHHTCSEEEEEGGGSCHH--------HHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHhcCCCEeec------cccccHHHH-HHHHHcCCCeeehHHhhcCHH--------HHHHHHHHHHHHhHHHHH
Confidence 45678888899998766 211111222 234467999999888753321 123333332222221
Q ss_pred -h--hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 505 -I--HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 505 -~--~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
+ .+-.....+.|++.|-+.-|.- -+-..|.+...+++...+ ++.+|+.+||.|++|+..+...| +|+|.||
T Consensus 159 EVh~~~El~rAl~~~a~iIGINNRnL---~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G--~~a~LVG 233 (258)
T 4a29_A 159 LINDENDLDIALRIGARFIGIMSRDF---ETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLG--VNAFLIS 233 (258)
T ss_dssp EESSHHHHHHHHHTTCSEEEECSBCT---TTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT--CCEEEEC
T ss_pred hcchHHHHHHHhcCCCcEEEEeCCCc---cccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC--CCEEEEC
Confidence 1 1123345567888876655433 234456777777776653 57899999999999999999987 9999999
Q ss_pred HHhhhCCchHHHHHccc
Q psy9514 581 RGALIKPWIFQEIKEKK 597 (611)
Q Consensus 581 RgaL~dP~lf~ei~~g~ 597 (611)
.+++..|+-..++.+|.
T Consensus 234 ealmr~~d~~~~Li~G~ 250 (258)
T 4a29_A 234 SSLMRNPEKIKELIEGS 250 (258)
T ss_dssp HHHHHCTTHHHHHHC--
T ss_pred HHHhCCCcHHHHHHcCc
Confidence 99999999888887774
No 180
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=97.48 E-value=0.0018 Score=69.21 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=101.7
Q ss_pred ccceeeeccc---CchHHHHHHHHHHHHhc--ccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--C
Q psy9514 368 ANLFGVQLCG---NNPYVLTKCTQLLEEQM--VVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--P 440 (611)
Q Consensus 368 ~~~~ivQi~g---~~p~~~~~aA~~l~~~~--g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--P 440 (611)
..++...+.+ .+++.+.+.++.+.+.. ||..|-|..|.+ +++.-.+.+++|++++|. +
T Consensus 157 ~v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~ 221 (390)
T 3ugv_A 157 SVKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTA 221 (390)
T ss_dssp EEEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSE
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCE
Confidence 3455555555 68888888777765433 899999987654 345567888999998864 5
Q ss_pred EEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceE
Q psy9514 441 ITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLI 520 (611)
Q Consensus 441 vtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~i 520 (611)
+.|...-++ +..++.+++++|++.|+.+|. |-
T Consensus 222 l~vDaN~~~--~~~~A~~~~~~l~~~~i~~iE-------qP--------------------------------------- 253 (390)
T 3ugv_A 222 LMVDFNQGL--DMAEAMHRTRQIDDLGLEWIE-------EP--------------------------------------- 253 (390)
T ss_dssp EEEECTTCC--CHHHHHHHHHHHTTSCCSEEE-------CC---------------------------------------
T ss_pred EEEECCCCC--CHHHHHHHHHHHHhhCCCEEE-------CC---------------------------------------
Confidence 555443344 357788999999999988763 21
Q ss_pred EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 521 TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 521 tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
..+.+++.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--+
T Consensus 254 -----------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~ik~~ 302 (390)
T 3ugv_A 254 -----------VVYDNFDGYAQLRHD-LKTPLMIGENFYGPREMHQALQAG-ACDLVMPDFM 302 (390)
T ss_dssp -----------SCTTCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHTT-CCSEECCBHH
T ss_pred -----------CCcccHHHHHHHHHh-cCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEeCcc
Confidence 223356677777665 489999999999999999999987 7999987543
No 181
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=97.47 E-value=0.0021 Score=68.62 Aligned_cols=136 Identities=7% Similarity=0.015 Sum_probs=100.1
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR 446 (611)
.++...+...+++.+.+.++.+.+..||..|-|..|.+ +++.-.+.+++|++++|. ++.|...
T Consensus 157 v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDaN 221 (383)
T 3toy_A 157 IPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDFN 221 (383)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 44445555568888888877765444999999987754 345567888999998864 5555444
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-++ +..++.++++.|++.|+.+|. |-
T Consensus 222 ~~~--~~~~A~~~~~~l~~~~i~~iE-------eP--------------------------------------------- 247 (383)
T 3toy_A 222 QSL--DPAEATRRIARLADYDLTWIE-------EP--------------------------------------------- 247 (383)
T ss_dssp TCS--CHHHHHHHHHHHGGGCCSEEE-------CC---------------------------------------------
T ss_pred CCC--CHHHHHHHHHHHHhhCCCEEE-------CC---------------------------------------------
Confidence 344 347788999999999988763 11
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+++.++++.+. .++||.+...++++.++.++++.+ .+|.|++-
T Consensus 248 -----~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~ik 294 (383)
T 3toy_A 248 -----VPQENLSGHAAVRER-SEIPIQAGENWWFPRGFAEAIAAG-ASDFIMPD 294 (383)
T ss_dssp -----SCTTCHHHHHHHHHH-CSSCEEECTTCCHHHHHHHHHHHT-CCSEECCC
T ss_pred -----CCcchHHHHHHHHhh-cCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEeC
Confidence 223356667777665 489999999999999999999987 79999874
No 182
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.47 E-value=0.0021 Score=68.87 Aligned_cols=143 Identities=8% Similarity=-0.064 Sum_probs=105.7
Q ss_pred ccceeeecc---cCchHHHHHHH-HHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCE
Q psy9514 368 ANLFGVQLC---GNNPYVLTKCT-QLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPI 441 (611)
Q Consensus 368 ~~~~ivQi~---g~~p~~~~~aA-~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~Pv 441 (611)
..++...+. ..+++.+.+.+ +.+.+ .||..|-|..|++... ...+++.-.+++++|+++++ +++
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~-~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l 194 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEA-EQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVI 194 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHH-HCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCE
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHH-cCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeE
Confidence 345555542 35788887777 65543 4999999999986321 34567888899999999985 577
Q ss_pred EEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEE
Q psy9514 442 TVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLIT 521 (611)
Q Consensus 442 tVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~it 521 (611)
.|...-+++ .+++.++++.|++.|+.+|. |-
T Consensus 195 ~vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------qP---------------------------------------- 225 (393)
T 4dwd_A 195 GFDANNGYS--VGGAIRVGRALEDLGYSWFE-------EP---------------------------------------- 225 (393)
T ss_dssp EEECTTCCC--HHHHHHHHHHHHHTTCSEEE-------CC----------------------------------------
T ss_pred EEECCCCCC--HHHHHHHHHHHHhhCCCEEE-------CC----------------------------------------
Confidence 766554543 57889999999999998764 11
Q ss_pred eccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 522 LHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 522 ihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
..+.+++.++++.+. .++||++.+.+.+++++.++++.+ +|.|++--+
T Consensus 226 ----------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~--~d~v~~k~~ 273 (393)
T 4dwd_A 226 ----------VQHYHVGAMGEVAQR-LDITVSAGEQTYTLQALKDLILSG--VRMVQPDIV 273 (393)
T ss_dssp ----------SCTTCHHHHHHHHHH-CSSEEEBCTTCCSHHHHHHHHHHT--CCEECCCTT
T ss_pred ----------CCcccHHHHHHHHhh-CCCCEEecCCcCCHHHHHHHHHcC--CCEEEeCcc
Confidence 123356677777665 589999999999999999999986 999998543
No 183
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=97.44 E-value=0.0011 Score=71.79 Aligned_cols=153 Identities=11% Similarity=0.019 Sum_probs=104.0
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccc------------c--------ccChHHHHH
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSG------------L--------LQRANILQS 428 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gsa------------L--------l~r~~~l~e 428 (611)
.++...+.+.+++.+.+.++.+.+ .||..|-|..|-|. ....||.. . ..+.+...+
T Consensus 139 v~~y~~~~~~~~e~~~~~a~~~~~-~Gf~~iKlKvG~~~---~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 214 (424)
T 3v3w_A 139 ILSYTHANGKDLDSTLEAVRKAKD-KGYKAIRVQCGIPG---IAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPD 214 (424)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHH-TTCSEEEEEECCTT---CSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEeccCcc---ccccccccccccccccccccccccccccchhHHHHHHH
Confidence 444445667789998888877653 49999999888641 11111110 0 012467788
Q ss_pred HHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhc
Q psy9514 429 VITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNF 508 (611)
Q Consensus 429 Iv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~ 508 (611)
+|++|++++|..+.+.+.....-+.+++.+++++|++.|+.+|. |.
T Consensus 215 ~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP--------------------------- 260 (424)
T 3v3w_A 215 VFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DA--------------------------- 260 (424)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC---------------------------
T ss_pred HHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC---------------------------
Confidence 99999999864444333433222457899999999999998874 11
Q ss_pred chhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 509 MPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 509 ~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-+
T Consensus 261 -----------------------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~g-a~d~v~~k~~~~ 311 (424)
T 3v3w_A 261 -----------------------VPAENQESFKLIRQH-TTTPLAVGEVFNSIHDCRELIQNQ-WIDYIRTTIVHA 311 (424)
T ss_dssp -----------------------SCCSSTTHHHHHHHH-CCSCEEECTTCCSGGGTHHHHHTT-CCSEECCCTTTT
T ss_pred -----------------------CChHhHHHHHHHHhh-CCCCEEEccCcCCHHHHHHHHHcC-CCCeEeecchhc
Confidence 122345556666554 589999999999999999999998 799999864433
No 184
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=97.42 E-value=0.00098 Score=70.31 Aligned_cols=141 Identities=9% Similarity=-0.040 Sum_probs=102.2
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.+....+...+++.+.+.++.+.+ .||..|-|+.|+. ++.-.+.+++|+++++ +++.|...
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~-~G~~~~K~K~G~~----------------~~~d~~~v~avR~~~g~~~~l~vDan 192 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHLA-LGFRVLKVKLCGD----------------EEQDFERLRRLHETLAGRAVVRVDPN 192 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHH-TTCCEEEEECCSC----------------HHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred eeeeEEEcCCCHHHHHHHHHHHHH-cCCCEEEEEeCCC----------------HHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 455566777889888887776643 5999999998763 4556788899999885 56666655
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ ..++.+++++|++.|+.+|. |.
T Consensus 193 ~~~~--~~~a~~~~~~l~~~~i~~iE-------qP--------------------------------------------- 218 (356)
T 3ro6_B 193 QSYD--RDGLLRLDRLVQELGIEFIE-------QP--------------------------------------------- 218 (356)
T ss_dssp TCCC--HHHHHHHHHHHHHTTCCCEE-------CC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHHHhcCCCEEE-------CC---------------------------------------------
Confidence 5553 47788999999999988763 21
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
..+.+++.++++.+. .++||++.+.+.+++++.++++.++.+|.|++--+.+-.
T Consensus 219 -----~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GG 272 (356)
T 3ro6_B 219 -----FPAGRTDWLRALPKA-IRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGG 272 (356)
T ss_dssp -----SCTTCHHHHHTSCHH-HHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCS
T ss_pred -----CCCCcHHHHHHHHhc-CCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCC
Confidence 122355555555443 378999999999999999999864149999987655433
No 185
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.39 E-value=0.0033 Score=79.69 Aligned_cols=62 Identities=19% Similarity=0.139 Sum_probs=47.3
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHH-----------HcCCCccEEEEcHHhhhCCc------hHHHHHcccCC
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESL-----------KKSPSISGVMIGRGALIKPW------IFQEIKEKKLF 599 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l-----------~~G~~aD~VmIGRgaL~dP~------lf~ei~~g~~~ 599 (611)
+..+.++++ ..++|||+.|||.+.+++..++ ..| ||+||||+.++.=.+ .=+.|.+....
T Consensus 744 l~lv~~i~~-~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palG--AdgV~~GT~f~~t~Ea~~s~~~K~~lv~a~~~ 820 (2060)
T 2uva_G 744 LLMYSRIRK-CSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMP--FDGCMFGSRMMTAKEAHTSKQAKQAIVDAPGV 820 (2060)
T ss_dssp HHHHHHHHT-STTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCC--CSCEEESGGGGGBTTSCCCHHHHHHHHTSCCC
T ss_pred HHHHHHHHH-HcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCC--CCEEEEchhhhcCcCCCCCHHHHHHHHhCCcc
Confidence 455666655 4589999999999999999999 887 999999999998543 33445555444
Q ss_pred Cc
Q psy9514 600 DI 601 (611)
Q Consensus 600 di 601 (611)
|+
T Consensus 821 dt 822 (2060)
T 2uva_G 821 DD 822 (2060)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 186
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.39 E-value=0.0048 Score=61.97 Aligned_cols=189 Identities=13% Similarity=0.078 Sum_probs=116.2
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceE--EeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEE
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFV--DVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTR 446 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~I--ELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR 446 (611)
.+..++...+...+.+..+.+.+ .|+|.| |+--|+=.+|. .+| ..+++++++.. +.|+-+.+-
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~-~G~d~lHvDVmDg~FVpni---t~G----------~~~v~~lr~~~p~~~ldvHLm 94 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLA-AGADNIHFDVMDNHYVPNL---TFG----------PMVLKALRDYGITAGMDVHLM 94 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHH-TTCCCEEEEEEBSSSSSCB---CCC----------HHHHHHHHHHTCCSCEEEEEE
T ss_pred eeehhhhcCChhhHHHHHHHHHH-cCCCEEEEEecCCCcCcch---hcC----------HHHHHHHHHhCCCCeEEEEEe
Confidence 45667888888778888887753 466644 44334421111 233 46888999888 899999877
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcCC
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWGA 517 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G~ 517 (611)
+.. + ..+++.+.++|++.||+|.-... .+..+.+.+++...+ ..+.+..+.+ ++
T Consensus 95 v~~----p--~~~i~~~~~aGAd~itvH~Ea~~----------~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~-~v 157 (246)
T 3inp_A 95 VKP----V--DALIESFAKAGATSIVFHPEASE----------HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVES-NI 157 (246)
T ss_dssp CSS----C--HHHHHHHHHHTCSEEEECGGGCS----------CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGG-GC
T ss_pred eCC----H--HHHHHHHHHcCCCEEEEccccch----------hHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHh-cC
Confidence 431 1 35788899999999999975321 122233333332211 1112222222 57
Q ss_pred ceEEeccc---cccccccCCccHHHHHHHHhh----CCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 518 SLITLHGR---TREQRYTKQADWDYIEKCAQL----CSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 518 ~~itihgr---tr~g~~~~~a~~~~i~~~~k~----~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
++|.+... +.-+.+ .+..++.|+++.+. ..+++|..-|||+ ++.+.++++.| ||.+++|++++..++.-
T Consensus 158 D~VlvMsV~PGfgGQ~f-i~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aG--AD~~V~GSaIf~a~dp~ 233 (246)
T 3inp_A 158 DRVLIMSVNPGFGGQKF-IPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCG--VNAFVAGSAIFNSDSYK 233 (246)
T ss_dssp SEEEEECSCTTC--CCC-CTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTT--CCEEEESHHHHTSSCHH
T ss_pred CEEEEeeecCCCCCccc-chHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcC--CCEEEEehHHhCCCCHH
Confidence 77755432 222222 23445666665432 2358899999997 79999999998 99999999999766654
Q ss_pred HHH
Q psy9514 591 QEI 593 (611)
Q Consensus 591 ~ei 593 (611)
+.+
T Consensus 234 ~~i 236 (246)
T 3inp_A 234 QTI 236 (246)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 187
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=97.38 E-value=0.0011 Score=70.88 Aligned_cols=126 Identities=13% Similarity=0.106 Sum_probs=95.4
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCch
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNN 454 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~ 454 (611)
|..++.+.+.++.+. ..||+.|.|+.|+ +++.-.+++++|+++++ .++.|...-+++ .+
T Consensus 153 g~~~e~~~~~a~~~~-~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~--~~ 213 (392)
T 3ddm_A 153 GINPENPEDVVARKA-AEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWD--LP 213 (392)
T ss_dssp EECSSSHHHHHHHHH-HHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCC--HH
T ss_pred cCCHHHHHHHHHHHH-HcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCC--HH
Confidence 334777777776664 3599999998774 34556788999999985 577776555553 47
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++..+++.|++.|+.+|. |- ..+
T Consensus 214 ~A~~~~~~L~~~~i~~iE-------eP--------------------------------------------------~~~ 236 (392)
T 3ddm_A 214 RARQMAQRLGPAQLDWLE-------EP--------------------------------------------------LRA 236 (392)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CC--------------------------------------------------SCT
T ss_pred HHHHHHHHHHHhCCCEEE-------CC--------------------------------------------------CCc
Confidence 889999999999998874 11 223
Q ss_pred cc-HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 535 AD-WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 535 a~-~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+ ++.++++.+. .++||.+.+.+++++++.++++.+ .+|.|++-
T Consensus 237 ~d~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k 281 (392)
T 3ddm_A 237 DRPAAEWAELAQA-APMPLAGGENIAGVAAFETALAAR-SLRVMQPD 281 (392)
T ss_dssp TSCHHHHHHHHHH-CSSCEEECTTCCSHHHHHHHHHHT-CEEEECCC
T ss_pred cchHHHHHHHHHh-cCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeC
Confidence 35 6667776655 489999999999999999999987 79999983
No 188
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=97.37 E-value=0.0011 Score=71.78 Aligned_cols=151 Identities=9% Similarity=-0.039 Sum_probs=102.6
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccc-----cc---------------cChHHHHH
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSG-----LL---------------QRANILQS 428 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gsa-----Ll---------------~r~~~l~e 428 (611)
.++...+.+.+++.+.+.++.+.+ .||..|-|..|.|. ....||.. .. ...+...+
T Consensus 140 v~~y~~~~~~~~e~~~~~a~~~~~-~Gf~~iKlKvg~~~---~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 215 (425)
T 3vcn_A 140 VTVYGHANGETIEDTIAEAVKYKA-MGYKAIRLQTGVPG---LASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPK 215 (425)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHH-TTCSEEEEEECCTT---CSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEeecCcc---ccccccccccccccCcccccccccccccchhHHHHHHH
Confidence 444445667789998888877653 59999999888641 01111110 00 01345578
Q ss_pred HHHHHHhhcCC--CEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhh
Q psy9514 429 VITCMNEVSSL--PITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIH 506 (611)
Q Consensus 429 Iv~av~~~~~~--PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~ 506 (611)
+|++||+++|. +|.|...-++ +.+++.+++++|++.|+.+|. |.
T Consensus 216 ~v~avR~a~G~d~~l~vDaN~~~--~~~~A~~~~~~L~~~~i~~iE-------qP------------------------- 261 (425)
T 3vcn_A 216 LFERAREVLGWDVHLLHDVHHRL--TPIEAARLGKDLEPYRLFWLE-------DS------------------------- 261 (425)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCC--CHHHHHHHHHHHGGGCCSEEE-------CC-------------------------
T ss_pred HHHHHHHHcCCCCEEEEECCCCC--CHHHHHHHHHHHHhcCCCEEE-------CC-------------------------
Confidence 89999999864 5554433333 457899999999999998874 11
Q ss_pred hcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 507 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 507 ~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
..+.+++.++++.+. .++||++.+.+.+++++.++++.+ .+|.|++--+-+
T Consensus 262 -------------------------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~ 312 (425)
T 3vcn_A 262 -------------------------VPAENQAGFRLIRQH-TTTPLAVGEIFAHVWDAKQLIEEQ-LIDYLRATVLHA 312 (425)
T ss_dssp -------------------------SCCSSTTHHHHHHHH-CCSCEEECTTCCSGGGTHHHHHTT-CCSEECCCTTTT
T ss_pred -------------------------CChhhHHHHHHHHhc-CCCCEEeCCCcCCHHHHHHHHHcC-CCCeEecChhhc
Confidence 122345556666554 589999999999999999999998 799999864433
No 189
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=97.36 E-value=0.0023 Score=67.75 Aligned_cols=137 Identities=12% Similarity=0.107 Sum_probs=99.2
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
..++...+...+++.+.+.++.+.+..||..|-|..|... ...-.+++++|++++| .++.|..
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~---------------~~~d~~~v~avR~a~g~~~~l~vDa 192 (367)
T 3dg3_A 128 RMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRP---------------VQLDTAVVRALRERFGDAIELYVDG 192 (367)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSS---------------THHHHHHHHHHHHHHGGGSEEEEEC
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCCh---------------hhhHHHHHHHHHHHhCCCCEEEEEC
Confidence 3455556667789888887777654449999999876520 1134678899999885 4555554
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.-++ +.+++.++++.|++.|+.+|. |-
T Consensus 193 n~~~--~~~~a~~~~~~l~~~~i~~iE-------qP-------------------------------------------- 219 (367)
T 3dg3_A 193 NRGW--SAAESLRAMREMADLDLLFAE-------EL-------------------------------------------- 219 (367)
T ss_dssp TTCS--CHHHHHHHHHHTTTSCCSCEE-------SC--------------------------------------------
T ss_pred CCCC--CHHHHHHHHHHHHHhCCCEEE-------CC--------------------------------------------
Confidence 4344 347788999999999887764 11
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+++.++++.+. .++||++.+.+.+++++.++++.+ .+|.|++=
T Consensus 220 ------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k 266 (367)
T 3dg3_A 220 ------CPADDVLSRRRLVGQ-LDMPFIADESVPTPADVTREVLGG-SATAISIK 266 (367)
T ss_dssp ------SCTTSHHHHHHHHHH-CSSCEEECTTCSSHHHHHHHHHHT-SCSEEEEC
T ss_pred ------CCcccHHHHHHHHHh-CCCCEEecCCcCCHHHHHHHHHcC-CCCEEEee
Confidence 122356666776655 489999999999999999999998 79999984
No 190
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=97.32 E-value=0.0028 Score=67.29 Aligned_cols=141 Identities=6% Similarity=0.045 Sum_probs=100.7
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.++...+...+++.+.+.++.+.+ .||..|-|..|+. .++.-.+++++|++++| +++.|...
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~-~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 199 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVP-AGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFN 199 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTT-TTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHH-cCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 444455555677776665555432 3999999987653 23445678899999885 56666655
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ ..++.++++.|++.|+.+|. |-
T Consensus 200 ~~~~--~~~A~~~~~~l~~~~i~~iE-------qP--------------------------------------------- 225 (377)
T 3my9_A 200 QALT--PFGAMKILRDVDAFRPTFIE-------QP--------------------------------------------- 225 (377)
T ss_dssp TCCC--TTTHHHHHHHHHTTCCSCEE-------CC---------------------------------------------
T ss_pred CCcC--HHHHHHHHHHHhhcCCCEEE-------CC---------------------------------------------
Confidence 5554 46788999999999988763 11
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
..+.+++.++++.+. .++||.+.+.+.+++++.++++.+ .+|.|++--+-+-.
T Consensus 226 -----~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~~k~~~~GG 278 (377)
T 3my9_A 226 -----VPRRHLDAMAGFAAA-LDTPILADESCFDAVDLMEVVRRQ-AADAISVKIMKCGG 278 (377)
T ss_dssp -----SCTTCHHHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHHT-CCSEEECCHHHHTS
T ss_pred -----CCccCHHHHHHHHHh-CCCCEEECCccCCHHHHHHHHHcC-CCCEEEecccccCC
Confidence 223456777777665 489999999999999999999988 79999986544433
No 191
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=97.31 E-value=0.0019 Score=68.22 Aligned_cols=121 Identities=13% Similarity=0.052 Sum_probs=88.2
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCchH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNNI 455 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~~ 455 (611)
.+++.+.+.|+.+. ..||++|.|+.+ |+...+++++|++++|. ++.+...-++ +.++
T Consensus 140 ~~~~~~~~~a~~~~-~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan~~~--~~~~ 198 (368)
T 1sjd_A 140 DTIPQLLDVVGGYL-DEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDANTAY--TLGD 198 (368)
T ss_dssp SCHHHHHHHHHHHH-HHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECTTCC--CGGG
T ss_pred CCHHHHHHHHHHHH-HhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEeccCCC--CHHH
Confidence 47888888877765 359999999853 24456888999988864 4433322233 2356
Q ss_pred HHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc
Q psy9514 456 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA 535 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a 535 (611)
.++++.|++.|+++|. |. ..+.
T Consensus 199 -~~~~~~l~~~~i~~iE-------~P--------------------------------------------------~~~~ 220 (368)
T 1sjd_A 199 -APQLARLDPFGLLLIE-------QP--------------------------------------------------LEEE 220 (368)
T ss_dssp -HHHHHTTGGGCCSEEE-------CC--------------------------------------------------SCTT
T ss_pred -HHHHHHHHhcCCCeEe-------CC--------------------------------------------------CChh
Confidence 7888888888888653 11 1234
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+++..+++.+. .++||++.+.+++++++.++++.+ .+|.|++
T Consensus 221 ~~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~i 262 (368)
T 1sjd_A 221 DVLGHAELARR-IQTPICLDESIVSARAAADAIKLG-AVQIVNI 262 (368)
T ss_dssp CHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHTT-CCSEEEE
T ss_pred hHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHcC-CCCEEEe
Confidence 66777776554 589999999999999999999988 7999998
No 192
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=97.31 E-value=0.0041 Score=66.46 Aligned_cols=145 Identities=11% Similarity=0.075 Sum_probs=106.6
Q ss_pred cceeeecc----cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEE
Q psy9514 369 NLFGVQLC----GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPIT 442 (611)
Q Consensus 369 ~~~ivQi~----g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~Pvt 442 (611)
.++...++ ..+++.+.+.|+.+.+ .||+.|.|+.|+. ++.-.+++++|+++++ +++.
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~-~G~~~~KiKvG~~----------------~~~d~~~v~avR~a~g~~~~l~ 190 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLE-QGFDVFRLYVGKN----------------LDADEEFLSRVKEEFGSRVRIK 190 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHH-TTCCEEEEECSSC----------------HHHHHHHHHHHHHHHGGGCEEE
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHH-cCCCEEEEeeCCC----------------HHHHHHHHHHHHHHcCCCCcEE
Confidence 45555666 6788888887777643 4999999998762 4556788999999885 4555
Q ss_pred -EEEEccccCCchHHHHHHHHHHHcCC--CEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCce
Q psy9514 443 -VKTRTGIHKDNNIIHNFMPKFRDWGA--SLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASL 519 (611)
Q Consensus 443 -VKiR~g~~~~~~~a~~la~~l~~aGv--d~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 519 (611)
|...-++ +.+++.+++++|++.|+ .+|. |-
T Consensus 191 ~vDan~~~--~~~~A~~~~~~l~~~~i~~~~iE-------qP-------------------------------------- 223 (391)
T 3gd6_A 191 SYDFSHLL--NWKDAHRAIKRLTKYDLGLEMIE-------SP-------------------------------------- 223 (391)
T ss_dssp EEECTTCS--CHHHHHHHHHHHTTCCSSCCEEE-------CC--------------------------------------
T ss_pred EecCCCCc--CHHHHHHHHHHHHhcCCCcceec-------CC--------------------------------------
Confidence 5443344 45788999999999998 7654 11
Q ss_pred EEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 520 ITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 520 itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+. .++|| .+.+++++++.++++.+ .+|.|++--+-+-...-+.+|
T Consensus 224 ------------~~~~d~~~~~~l~~~-~~iPI--dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 224 ------------APRNDFDGLYQLRLK-TDYPI--SEHVWSFKQQQEMIKKD-AIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp ------------SCTTCHHHHHHHHHH-CSSCE--EEECCCHHHHHHHHHHT-CCSEEEECHHHHTSHHHHHHH
T ss_pred ------------CChhhHHHHHHHHHH-cCCCc--CCCCCCHHHHHHHHHcC-CCCEEEECchhcCCHHHHHHH
Confidence 223456777777665 48999 88999999999999988 799999988777666554444
No 193
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.31 E-value=0.0019 Score=70.25 Aligned_cols=147 Identities=13% Similarity=0.108 Sum_probs=98.8
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI--- 504 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~--- 504 (611)
+-++.+++.+++||..|= -..+...+.. +..+|+|+|-+....... ..+.++.+..++....
T Consensus 98 ~dL~~vr~~v~lPvLrKD------FI~d~~Qi~e-a~~~GAD~ILLi~a~l~~--------~~l~~l~~~a~~lgm~~Lv 162 (452)
T 1pii_A 98 NFLPIVSQIAPQPILCKD------FIIDPYQIYL-ARYYQADACLLMLSVLDD--------DQYRQLAAVAHSLEMGVLT 162 (452)
T ss_dssp THHHHHHHHCCSCEEEES------CCCSHHHHHH-HHHTTCSEEEEETTTCCH--------HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCeEEEe------ccCCHHHHHH-HHHcCCCEEEEEcccCCH--------HHHHHHHHHHHHcCCeEEE
Confidence 345677788899996552 2222334444 889999999998875432 2234444444433222
Q ss_pred ---hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 505 ---IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 505 ---~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+-+....+.|++.|-+.-|.-. +-..|++...++++..+ ++++|+.|||+|++|+.++.+. +|+|.||
T Consensus 163 Evh~~eE~~~A~~lga~iIGinnr~L~---t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~---a~avLVG 236 (452)
T 1pii_A 163 EVSNEEEQERAIALGAKVVGINNRDLR---DLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF---ANGFLIG 236 (452)
T ss_dssp EECSHHHHHHHHHTTCSEEEEESEETT---TTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT---CSEEEEC
T ss_pred EeCCHHHHHHHHHCCCCEEEEeCCCCC---CCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh---CCEEEEc
Confidence 112334566789998876655432 23457777777776653 6899999999999999998764 8999999
Q ss_pred HHhhhCCchHHHHHc
Q psy9514 581 RGALIKPWIFQEIKE 595 (611)
Q Consensus 581 RgaL~dP~lf~ei~~ 595 (611)
.+++.-+++-..+++
T Consensus 237 ealmr~~d~~~~~~~ 251 (452)
T 1pii_A 237 SALMAHDDLHAAVRR 251 (452)
T ss_dssp HHHHTCSCHHHHHHH
T ss_pred HHHcCCcCHHHHHHH
Confidence 999988877665543
No 194
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=97.30 E-value=0.0035 Score=66.43 Aligned_cols=137 Identities=7% Similarity=0.089 Sum_probs=98.1
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRT 447 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~ 447 (611)
+....+...+++.+.+.++.+. ..||..|-|..|+. ++.-.+++++|++++|. ++.|...-
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~-~~G~~~~K~KvG~~----------------~~~d~~~v~avR~~~g~~~~l~vDaN~ 193 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIK-KNGFEIIKVKVGGS----------------KELDVERIRMIREAAGDSITLRIDANQ 193 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeEEEecCCCHHHHHHHHHHHH-HcCCCeEEEEecCC----------------HHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 3344566678888887777654 35999999987653 34557889999999864 45444333
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
++ +.+++.+++++|++.|+.+|. |-
T Consensus 194 ~~--~~~~A~~~~~~l~~~~i~~iE-------qP---------------------------------------------- 218 (368)
T 3q45_A 194 GW--SVETAIETLTLLEPYNIQHCE-------EP---------------------------------------------- 218 (368)
T ss_dssp CB--CHHHHHHHHHHHGGGCCSCEE-------CC----------------------------------------------
T ss_pred CC--ChHHHHHHHHHHhhcCCCEEE-------CC----------------------------------------------
Confidence 33 357788999999999988764 11
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
..+.+++.++++.+. .++||.+.+.+++++++.++++.+ .+|.|++--+.+
T Consensus 219 ----~~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~ 269 (368)
T 3q45_A 219 ----VSRNLYTALPKIRQA-CRIPIMADESCCNSFDAERLIQIQ-ACDSFNLKLSKS 269 (368)
T ss_dssp ----BCGGGGGGHHHHHHT-CSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECTTTT
T ss_pred ----CChhHHHHHHHHHhh-CCCCEEEcCCcCCHHHHHHHHHcC-CCCeEEechhhc
Confidence 122244555665554 589999999999999999999987 799999864443
No 195
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=97.29 E-value=0.0045 Score=66.16 Aligned_cols=141 Identities=9% Similarity=0.030 Sum_probs=98.3
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+++.....+.......||..|-|..|.+. +......+....+++++||+++| +++.|...-++ +..++
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~--------~~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~--~~~~A 215 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEV--------GRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCY--TPDRA 215 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTT--------CTTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCC--CHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCc--------ccccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCc--CHHHH
Confidence 45544443333322459999999988762 22233346677889999999986 45665544444 34788
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.+++++|++.|+.+|. |- ..+.+
T Consensus 216 ~~~~~~l~~~~i~~iE-------eP--------------------------------------------------~~~~d 238 (388)
T 3tcs_A 216 IEVGHMLQDHGFCHFE-------EP--------------------------------------------------CPYWE 238 (388)
T ss_dssp HHHHHHHHHTTCCEEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHhhcCCeEEE-------CC--------------------------------------------------CCccC
Confidence 9999999999987762 21 22335
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
++.++++.+. .++||.+...++|+.++.++++.+ .+|.|++--+-+-...
T Consensus 239 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~d~~~~GGit 288 (388)
T 3tcs_A 239 LAQTKQVTDA-LDIDVTGGEQDCDLPTWQRMIDMR-AVDIVQPDILYLGGIC 288 (388)
T ss_dssp HHHHHHHHHH-CSSCEEECTTCCCHHHHHHHHHHT-CCSEECCCHHHHTSHH
T ss_pred HHHHHHHHHh-cCCCEEcCCccCCHHHHHHHHHcC-CCCEEEeCccccCCHH
Confidence 6667777665 489999999999999999999987 7999998655444433
No 196
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.29 E-value=0.0034 Score=62.64 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=82.4
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.|+|.||+.. .+|..+..+.+.+.+-+++|+++++ .++-|-+=++. -+.+...+.++...++|+|+|-
T Consensus 107 ~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVK 175 (239)
T 3ngj_A 107 QGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVK 175 (239)
T ss_dssp TTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEE
Confidence 3999999852 1355556788888888999998885 33333333333 1334566777778899999987
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc---cHHHHHHHHhhCCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA---DWDYIEKCAQLCSP 549 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a---~~~~i~~~~k~~~~ 549 (611)
.+-+.. .+.+ +...+++.+. .+
T Consensus 176 TSTGf~-----------------------------------------------------~ggAt~~dv~lmr~~vg--~~ 200 (239)
T 3ngj_A 176 TSTGFG-----------------------------------------------------THGATPEDVKLMKDTVG--DK 200 (239)
T ss_dssp CCCSSS-----------------------------------------------------SCCCCHHHHHHHHHHHG--GG
T ss_pred CCCCCC-----------------------------------------------------CCCCCHHHHHHHHHhhC--CC
Confidence 653210 1122 2333444432 47
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCcc--EEEEcHHhh
Q psy9514 550 APLYGNGDILSYEDYTESLKKSPSIS--GVMIGRGAL 584 (611)
Q Consensus 550 iPVIgnGgI~s~eda~~~l~~G~~aD--~VmIGRgaL 584 (611)
++|.+.|||.|++|+.++++.| ++ |+..|+.++
T Consensus 201 v~VKasGGIrt~~da~~~i~aG--A~riGtS~~~~I~ 235 (239)
T 3ngj_A 201 ALVKAAGGIRTFDDAMKMINNG--ASRIGASAGIAIL 235 (239)
T ss_dssp SEEEEESSCCSHHHHHHHHHTT--EEEEEESCHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHhc--ccceecccHHHHH
Confidence 9999999999999999999998 99 555555554
No 197
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.29 E-value=0.0018 Score=64.98 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=59.4
Q ss_pred chhhHhcCCceEEeccccccc--cccCCccHHHHHHHHhhC-CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 509 MPKFRDWGASLITLHGRTREQ--RYTKQADWDYIEKCAQLC-SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 509 ~~~l~~~G~~~itihgrtr~g--~~~~~a~~~~i~~~~k~~-~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
+....+.|+++|.+....... ....+..++.++++.+.. .++||++-||| +++++.++++.| +|+|.||++++.
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aG--a~gvav~sai~~ 224 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAG--ARRIVVVRAITS 224 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTT--CCCEEESHHHHT
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcC--CCEEEEeHHHhC
Confidence 334556899999875432111 011345788888887652 48999999999 899999999998 999999999998
Q ss_pred CCchHHHHH
Q psy9514 586 KPWIFQEIK 594 (611)
Q Consensus 586 dP~lf~ei~ 594 (611)
.++....++
T Consensus 225 a~dp~~a~~ 233 (243)
T 3o63_A 225 ADDPRAAAE 233 (243)
T ss_dssp CSSHHHHHH
T ss_pred CCCHHHHHH
Confidence 776554443
No 198
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.29 E-value=0.0026 Score=62.57 Aligned_cols=172 Identities=15% Similarity=0.059 Sum_probs=113.6
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
..+++.=+.+.+++++...++.+. ..|++.||+-+.-|. ..+.|+.+++..+.+ .| -.
T Consensus 12 ~~~vi~Vir~~~~~~a~~~a~al~-~gGi~~iEvt~~t~~------------------a~~~I~~l~~~~p~~-~I--GA 69 (217)
T 3lab_A 12 TKPLIPVIVIDDLVHAIPMAKALV-AGGVHLLEVTLRTEA------------------GLAAISAIKKAVPEA-IV--GA 69 (217)
T ss_dssp SCSEEEEECCSCGGGHHHHHHHHH-HTTCCEEEEETTSTT------------------HHHHHHHHHHHCTTS-EE--EE
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHH-HcCCCEEEEeCCCcc------------------HHHHHHHHHHHCCCC-eE--ee
Confidence 456777788899999999999886 359999999765551 357778888877443 22 23
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch------------hhhhcchhhHhc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN------------IIHNFMPKFRDW 515 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~------------~~~~~~~~l~~~ 515 (611)
|.-- +.+-++.+.++|+++|..-+-+ -+.+..|. +... .+.+-+-...++
T Consensus 70 GTVl----t~~~a~~ai~AGA~fivsP~~~----------~evi~~~~----~~~v~~~~~~~~~PG~~TptE~~~A~~~ 131 (217)
T 3lab_A 70 GTVC----TADDFQKAIDAGAQFIVSPGLT----------PELIEKAK----QVKLDGQWQGVFLPGVATASEVMIAAQA 131 (217)
T ss_dssp ECCC----SHHHHHHHHHHTCSEEEESSCC----------HHHHHHHH----HHHHHCSCCCEEEEEECSHHHHHHHHHT
T ss_pred cccc----CHHHHHHHHHcCCCEEEeCCCc----------HHHHHHHH----HcCCCccCCCeEeCCCCCHHHHHHHHHc
Confidence 3222 2355778889999988543322 11222222 2111 112233456788
Q ss_pred CCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 516 GASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 516 G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
|++.+-++.-. ......+++.+...++.+||+..|||+ ++.+.++++.| +..+..| ++|..|.+
T Consensus 132 Gad~vK~FPa~------~~gG~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aG--a~~~vgG-s~l~~~~~ 195 (217)
T 3lab_A 132 GITQLKCFPAS------AIGGAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLP--NVICAGG-SWLTESKL 195 (217)
T ss_dssp TCCEEEETTTT------TTTHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHST--TBCCEEE-SGGGCHHH
T ss_pred CCCEEEECccc------cccCHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCC--CEEEEEC-hhhcChhH
Confidence 99999765311 111358888887777789999999997 89999999997 7777666 56666554
No 199
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.27 E-value=0.0084 Score=60.66 Aligned_cols=55 Identities=13% Similarity=0.200 Sum_probs=42.5
Q ss_pred HHHHHHHHhhCCCCcEEEecCCC--CHHHHHHHH----HcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDIL--SYEDYTESL----KKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~--s~eda~~~l----~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+.++++.+....+||++.|||. +++++.+.+ +.| ++|+.+||.++..|+...-+
T Consensus 184 ~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aG--A~GvsvgraI~~~~dp~~~~ 244 (263)
T 1w8s_A 184 PKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAG--ALGIAVGRNVWQRRDALKFA 244 (263)
T ss_dssp HHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTT--CCEEEESHHHHTSTTHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcC--CeEEEEehhhcCCcCHHHHH
Confidence 34555555554234999999999 999998887 666 99999999999988754443
No 200
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.25 E-value=0.0029 Score=63.93 Aligned_cols=124 Identities=15% Similarity=0.054 Sum_probs=85.0
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.|+|.||+.. .+|..+..+.+.+.+-+++|+++++ .|+-|-+=++.- +.+.....++...++|+|+|-
T Consensus 123 ~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L-t~eei~~A~~ia~eaGADfVK 191 (260)
T 3r12_A 123 SGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL-DTEEKIAACVISKLAGAHFVK 191 (260)
T ss_dssp HTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC-CHHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC-CHHHHHHHHHHHHHhCcCEEE
Confidence 3999999842 2455566788888888999998875 454333333422 234556777778899999987
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc---cHHHHHHHHhhCCC
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA---DWDYIEKCAQLCSP 549 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a---~~~~i~~~~k~~~~ 549 (611)
.+-+. ..+.+ +...+++.+. .+
T Consensus 192 TSTGf-----------------------------------------------------~~~GAT~edV~lm~~~vg--~~ 216 (260)
T 3r12_A 192 TSTGF-----------------------------------------------------GTGGATAEDVHLMKWIVG--DE 216 (260)
T ss_dssp CCCSS-----------------------------------------------------SSCCCCHHHHHHHHHHHC--TT
T ss_pred cCCCC-----------------------------------------------------CCCCCCHHHHHHHHHHhC--CC
Confidence 65321 01122 2333444432 47
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCcc--EEEEcHHhhh
Q psy9514 550 APLYGNGDILSYEDYTESLKKSPSIS--GVMIGRGALI 585 (611)
Q Consensus 550 iPVIgnGgI~s~eda~~~l~~G~~aD--~VmIGRgaL~ 585 (611)
++|-+.|||.|.+++.++++.| ++ |+..|+.++.
T Consensus 217 v~VKaAGGIrt~~~al~mi~aG--A~RiGtS~g~~I~~ 252 (260)
T 3r12_A 217 MGVKASGGIRTFEDAVKMIMYG--ADRIGTSSGVKIVQ 252 (260)
T ss_dssp SEEEEESSCCSHHHHHHHHHTT--CSEEEESCHHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHcC--CceeecchHHHHHH
Confidence 9999999999999999999998 99 7777776654
No 201
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.24 E-value=0.002 Score=64.13 Aligned_cols=174 Identities=8% Similarity=0.039 Sum_probs=109.7
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.+++.=+.+.+++.+...++.+. ..|++.|||-+--|. ..+.++.+++..+. +.+ ..|
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~-~gGi~~iEvt~~t~~------------------a~e~I~~l~~~~~~-~~i--GaG 91 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLA-ENGLPAAEITFRSDA------------------AVEAIRLLRQAQPE-MLI--GAG 91 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHH-HTTCCEEEEETTSTT------------------HHHHHHHHHHHCTT-CEE--EEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHH-HCCCCEEEEeCCCCC------------------HHHHHHHHHHhCCC-CEE--eEC
Confidence 35666677888999999988876 359999999654441 24677777776632 222 233
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-cccC-chhhhhcchhhHhcCCceEEecccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-CSRD-NNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-~~~~-~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
.-- ..+-++.+.++|+++|..-+ . +-+.+..|... ++-. --.+.+.+....++|++.|-++.-.
T Consensus 92 TVl----t~~~a~~Ai~AGA~fIvsP~-~---------~~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~ 157 (232)
T 4e38_A 92 TIL----NGEQALAAKEAGATFVVSPG-F---------NPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAE 157 (232)
T ss_dssp CCC----SHHHHHHHHHHTCSEEECSS-C---------CHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEECSTT
T ss_pred CcC----CHHHHHHHHHcCCCEEEeCC-C---------CHHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEECcCc
Confidence 222 24557788899999986322 1 11222222221 0000 0012233345678899999775421
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
......+++.+...++.+||+..||| +++.+.++++.| +.++.+|. .|.+|.
T Consensus 158 ------~~gG~~~lkal~~p~p~ip~~ptGGI-~~~n~~~~l~aG--a~~~vgGs-~l~~~~ 209 (232)
T 4e38_A 158 ------ASGGISMVKSLVGPYGDIRLMPTGGI-TPSNIDNYLAIP--QVLACGGT-WMVDKK 209 (232)
T ss_dssp ------TTTHHHHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTST--TBCCEEEC-GGGCHH
T ss_pred ------cccCHHHHHHHHHHhcCCCeeeEcCC-CHHHHHHHHHCC--CeEEEECc-hhcChH
Confidence 11246889988777778999999999 599999999987 77877774 455554
No 202
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.24 E-value=0.0015 Score=64.84 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=49.8
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.+.++++.+...++||+..|||+|++++.+++ .| ||+|+||.++..+|.++.++-+
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~g--AD~VVVGSa~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EH--ADVIVVGNAVYEDFDRALKTVA 223 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TT--CSEEEECTHHHHCHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hC--CCEEEEChHHhcCHHHHHHHHH
Confidence 678888877654379999999999999999988 56 9999999999999999988754
No 203
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=97.20 E-value=0.0059 Score=64.65 Aligned_cols=136 Identities=10% Similarity=0.146 Sum_probs=97.3
Q ss_pred ceeeecccCc-hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 370 LFGVQLCGNN-PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 370 ~~ivQi~g~~-p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
++...+...+ ++.+.++++.+. ..||..|-|..|+. +++.-.+++++|+++++ .++.|...
T Consensus 133 ~~~~t~~~~~~~~~~~~~~~~~~-~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 133 PIAWTLASGDTKRDLDSAVEMIE-RRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EBEEEECSSSHHHHHHHHHHHHH-TTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eEEEEecCCCcHHHHHHHHHHHH-HCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 3333343333 445555555543 35999999987753 24455788899999985 67888766
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
.+++ ..++..+++.|++.|+.+|. |-
T Consensus 197 ~~~~--~~~a~~~~~~l~~~~i~~iE-------qP--------------------------------------------- 222 (370)
T 1chr_A 197 QAWD--EQVASVYIPELEALGVELIE-------QP--------------------------------------------- 222 (370)
T ss_dssp TCCC--TTHHHHHTHHHHTTTEEEEE-------CC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHHHhcCCCEEE-------CC---------------------------------------------
Confidence 6665 36788999999999887763 21
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
..+.+++.++++.+. .++||.+.+.+++++++.++++.+ .+|.|++--+
T Consensus 223 -----~~~~~~~~~~~l~~~-~~iPia~dE~~~~~~~~~~~~~~~-~~d~v~~k~~ 271 (370)
T 1chr_A 223 -----VGRENTQALRRLSDN-NRVAIMADESLSTLASAFDLARDR-SVDVFSLKLC 271 (370)
T ss_dssp -----SCTTCHHHHHHHHHH-SCSEEEESSSCCSHHHHHHHHTTT-SCSEEEECTT
T ss_pred -----CCcccHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEECcc
Confidence 223456677777665 489999999999999999999987 7999998543
No 204
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.20 E-value=0.00071 Score=67.78 Aligned_cols=59 Identities=27% Similarity=0.278 Sum_probs=52.7
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
..+++.+.++++. ..+|+-..|||+|.+++++++..| +|-|.||..++.||.++.++.+
T Consensus 61 ~~~~~~i~~i~~~-~~~pl~vGGGIrs~e~~~~~l~~G--adkVii~t~a~~~p~li~e~~~ 119 (243)
T 4gj1_A 61 KRQFALIEKLAKE-VSVNLQVGGGIRSKEEVKALLDCG--VKRVVIGSMAIKDATLCLEILK 119 (243)
T ss_dssp GCCHHHHHHHHHH-CCSEEEEESSCCCHHHHHHHHHTT--CSEEEECTTTTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHh-cCCCeEeccccccHHHHHHHHHcC--CCEEEEccccccCCchHHHHHh
Confidence 3567788888776 489999999999999999999998 9999999999999999988755
No 205
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=97.18 E-value=0.0069 Score=65.09 Aligned_cols=141 Identities=6% Similarity=0.118 Sum_probs=94.6
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCcc---ceecccccc----ccc---cChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIE---FIYKQGSGS----GLL---QRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~---~v~~~g~Gs----aLl---~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
.+++.+++.++.+.+ .||..|-|..+.+-. .....|.+. ... ...++..++|++||+++|..+.+.+..
T Consensus 142 ~~~e~~~~~a~~~~~-~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDa 220 (409)
T 3go2_A 142 TDLDGVKRTAEEARE-RQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDL 220 (409)
T ss_dssp CSHHHHHHHHHHHHH-TTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCHHHHHHHHHHHHH-cCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 367888877776643 599999998632100 000112221 111 124677899999999986444444343
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
...-+.+++.++++.|++.|+.+|..-
T Consensus 221 N~~~~~~~A~~~~~~L~~~~i~~iE~P----------------------------------------------------- 247 (409)
T 3go2_A 221 NFNAKPEGYLKILRELADFDLFWVEID----------------------------------------------------- 247 (409)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSEEECC-----------------------------------------------------
T ss_pred CCCCCHHHHHHHHHHHhhcCCeEEEeC-----------------------------------------------------
Confidence 222245788999999999999887621
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++=
T Consensus 248 ------~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-~~d~v~~k 292 (409)
T 3go2_A 248 ------SYSPQGLAYVRNH-SPHPISSCETLFGIREFKPFFDAN-AVDVAIVD 292 (409)
T ss_dssp ------CSCHHHHHHHHHT-CSSCEEECTTCCHHHHHHHHHHTT-CCSEEEEC
T ss_pred ------cCCHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhC-CCCEEEeC
Confidence 1245556666554 589999999999999999999998 79999874
No 206
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.17 E-value=0.001 Score=67.12 Aligned_cols=183 Identities=15% Similarity=0.170 Sum_probs=99.8
Q ss_pred chHHHHHHHHHHHHhcccceEEecc--CCCccceeccc------ccccccc--ChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNL--GCPIEFIYKQG------SGSGLLQ--RANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~--gCP~~~v~~~g------~GsaLl~--r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
+.+...+++..+. ..|+|.|||.+ +=| .-+| .--+|.+ +.+.+.++++.++.. +|+.+- +
T Consensus 26 ~~~~t~~~~~~l~-~~GaD~iElGiPfSDP----~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~Pivlm---~ 95 (252)
T 3tha_A 26 NLQTSEAFLQRLD-QSPIDILELGVAYSDP----IADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KALVFM---V 95 (252)
T ss_dssp CHHHHHHHHHTGG-GSSCSEEEEECCCSCC----CSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SEEEEE---C
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECCCCCCC----CCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CCEEEE---e
Confidence 4466667766664 46999999954 334 2222 1122322 346667777777654 676553 2
Q ss_pred ccCCc--hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh---------hhhcchhhHhcCC
Q psy9514 449 IHKDN--NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI---------IHNFMPKFRDWGA 517 (611)
Q Consensus 449 ~~~~~--~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~---------~~~~~~~l~~~G~ 517 (611)
+.... --..++++.+.++|++.+.|-.=..+. ..++...+++.... ..+-+..+.+.+-
T Consensus 96 Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE----------~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~ 165 (252)
T 3tha_A 96 YYNLIFSYGLEKFVKKAKSLGICALIVPELSFEE----------SDDLIKECERYNIALITLVSVTTPKERVKKLVKHAK 165 (252)
T ss_dssp CHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGG----------CHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCC
T ss_pred ccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHH----------HHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCC
Confidence 21100 114578999999999998764422111 11222222221111 1122233333333
Q ss_pred ceE---EeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 518 SLI---TLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 518 ~~i---tihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
..+ ...|.|.........-.++++++.+ ..++||+..+||.+++++.++.. + +|+|.||.+++.
T Consensus 166 gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~-~~~~Pv~vGfGIst~e~a~~~~~-~--ADGVIVGSAiVk 232 (252)
T 3tha_A 166 GFIYLLASIGITGTKSVEEAILQDKVKEIRS-FTNLPIFVGFGIQNNQDVKRMRK-V--ADGVIVGTSIVK 232 (252)
T ss_dssp SCEEEECCSCSSSCSHHHHHHHHHHHHHHHT-TCCSCEEEESSCCSHHHHHHHTT-T--SSEEEECHHHHH
T ss_pred CeEEEEecCCCCCcccCCCHHHHHHHHHHHH-hcCCcEEEEcCcCCHHHHHHHHh-c--CCEEEECHHHHH
Confidence 333 1123333221111112345666544 46899999999999999998754 5 999999988763
No 207
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.16 E-value=0.0039 Score=61.99 Aligned_cols=126 Identities=14% Similarity=0.173 Sum_probs=84.6
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEcccc---CCchHHHHHHHHHHHcCCC
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIH---KDNNIIHNFMPKFRDWGAS 469 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~---~~~~~a~~la~~l~~aGvd 469 (611)
.|+|.||+.. .+|..+..+.+.+.+-+++|++.++ .|+-|-+=++.- .+.+...+.++...++|+|
T Consensus 92 ~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGAD 161 (231)
T 3ndo_A 92 AGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGAD 161 (231)
T ss_dssp TTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcC
Confidence 4999999842 2455666788889999999999885 444333333322 1334556677777899999
Q ss_pred EEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc---cHHHHHHHHhh
Q psy9514 470 LITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA---DWDYIEKCAQL 546 (611)
Q Consensus 470 ~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a---~~~~i~~~~k~ 546 (611)
+|-.+-+... .+.+ +...+++...
T Consensus 162 fVKTSTGf~~----------------------------------------------------~~gAt~edv~lm~~~v~- 188 (231)
T 3ndo_A 162 FVKTSTGFHP----------------------------------------------------SGGASVQAVEIMARTVG- 188 (231)
T ss_dssp EEECCCSCCT----------------------------------------------------TCSCCHHHHHHHHHHHT-
T ss_pred EEEcCCCCCC----------------------------------------------------CCCCCHHHHHHHHHHhC-
Confidence 9865432210 1222 2333444433
Q ss_pred CCCCcEEEecCCCCHHHHHHHHHcCCCcc--EEEEcHHhhh
Q psy9514 547 CSPAPLYGNGDILSYEDYTESLKKSPSIS--GVMIGRGALI 585 (611)
Q Consensus 547 ~~~iPVIgnGgI~s~eda~~~l~~G~~aD--~VmIGRgaL~ 585 (611)
.+++|-+.|||.|.+++.++++.| ++ |+..|+.++.
T Consensus 189 -~~v~VKaaGGIrt~~~a~~~i~aG--a~RiGtS~g~~I~~ 226 (231)
T 3ndo_A 189 -ERLGVKASGGIRTAEQAAAMLDAG--ATRLGLSGSRAVLD 226 (231)
T ss_dssp -TTSEEEEESSCCSHHHHHHHHHTT--CSEEEESSHHHHHH
T ss_pred -CCceEEEeCCCCCHHHHHHHHHhc--chhcccchHHHHHh
Confidence 479999999999999999999998 99 7777776653
No 208
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=97.16 E-value=0.0024 Score=69.17 Aligned_cols=153 Identities=10% Similarity=0.027 Sum_probs=96.8
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccce-e--cccccc--------c--------cccChHHHHHH
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFI-Y--KQGSGS--------G--------LLQRANILQSV 429 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v-~--~~g~Gs--------a--------Ll~r~~~l~eI 429 (611)
.++.....+.+++.+.+.++... ..||..|-|..|.|.... + ..+.+- . .....++..++
T Consensus 139 v~~y~~~~~~~~~~~~~~~~~~~-~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 139 VMVYCHTTGHSIDEVLDDYAKHR-DQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHH-HTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred eeEeEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 44555556677777766655443 349999999988762110 0 001000 0 00123567789
Q ss_pred HHHHHhhcC--CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhh
Q psy9514 430 ITCMNEVSS--LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHN 507 (611)
Q Consensus 430 v~av~~~~~--~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~ 507 (611)
+++||+++| ++|.|...-++ +.+++..++++|++.|+.+|. |.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~--~~~~A~~~~~~L~~~~i~~iE-------eP-------------------------- 262 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRL--TPIEAARFGKSVEDYRLFWME-------DP-------------------------- 262 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCS--CHHHHHHHHHHTGGGCCSEEE-------CC--------------------------
T ss_pred HHHHHHHhCCCCEEEEECCCCC--CHHHHHHHHHHHhhcCCCEEE-------CC--------------------------
Confidence 999999996 45555443333 457899999999999998874 11
Q ss_pred cchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHh
Q psy9514 508 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGA 583 (611)
Q Consensus 508 ~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRga 583 (611)
..+.+++.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--+-
T Consensus 263 ------------------------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~g-a~d~v~~k~~~ 312 (426)
T 4e4f_A 263 ------------------------TPAENQACFRLIRQH-TVTPIAVGEVFNSIWDCKQLIEEQ-LIDYIRTTITH 312 (426)
T ss_dssp ------------------------SCCSSGGGGHHHHTT-CCSCEEECTTCCSGGGTHHHHHTT-CCSEECCCTTT
T ss_pred ------------------------CChHHHHHHHHHHhc-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEeCccc
Confidence 112234445555444 589999999999999999999998 79999875433
No 209
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.12 E-value=0.001 Score=71.01 Aligned_cols=129 Identities=8% Similarity=0.054 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHHHH
Q psy9514 381 YVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNIIHN 458 (611)
Q Consensus 381 ~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a~~ 458 (611)
+.+.+.|+.+. ..||++|.|+.|....+. -. .++++...++|++++++++ +++.+-.--++ +.+++.+
T Consensus 150 e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~------~~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~--~~~~ai~ 219 (392)
T 3p3b_A 150 ALMQEEAMQGY-AKGQRHFKIKVGRGGRHM------PL-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAY--NLNLTKE 219 (392)
T ss_dssp HHHHHHHHHHH-HTTCCCEEEECCHHHHTS------CH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCC--CHHHHHH
T ss_pred HHHHHHHHHHH-HhCCCEEEECcCcCcccC------Cc-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCC--CHHHHHH
Confidence 88887777765 359999999877542111 01 2367788899999999885 45544322222 4467889
Q ss_pred HHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH
Q psy9514 459 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD 538 (611)
Q Consensus 459 la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~ 538 (611)
+++.|++.|+++|- |. . . .+++
T Consensus 220 ~~~~l~~~~i~~iE-------~P-------------------------------------------------~-~-~d~~ 241 (392)
T 3p3b_A 220 VLAALSDVNLYWLE-------EA-------------------------------------------------F-H-EDEA 241 (392)
T ss_dssp HHHHTTTSCEEEEE-------CS-------------------------------------------------S-S-CCHH
T ss_pred HHHHHHhcCCCEEe-------cC-------------------------------------------------C-c-ccHH
Confidence 99999888876543 11 1 1 3556
Q ss_pred HHHHHHhhC----CCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 539 YIEKCAQLC----SPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 539 ~i~~~~k~~----~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
..+++.+.. .++||++.+ +++++++.++++.+ .+|.|++
T Consensus 242 ~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~-~~d~v~i 284 (392)
T 3p3b_A 242 LYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRG-RVDVLQY 284 (392)
T ss_dssp HHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTT-SCCEECC
T ss_pred HHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcC-CCCEEEe
Confidence 666665541 589999999 99999999999998 7999987
No 210
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.09 E-value=0.00027 Score=56.87 Aligned_cols=30 Identities=27% Similarity=0.531 Sum_probs=24.5
Q ss_pred cccCCcccccCCCCCCCCCCCCCCCcCChhHHhh
Q psy9514 73 EDCYCPFLKDSTLEQTCKYGEKCKFVHDKNVFMK 106 (611)
Q Consensus 73 ~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~yl~ 106 (611)
.-+||..|..+ .|+||++|.|+|..++...
T Consensus 19 k~~LC~~~~~G----~C~~G~~C~FAHG~~ELr~ 48 (69)
T 2d9m_A 19 YFSICDRYMNG----TCPEGNSCKFAHGNAELHE 48 (69)
T ss_dssp CCSBCHHHHHS----CCSSCSSCSSBSSHHHHHH
T ss_pred CcccCcccCcC----CCCCCCccCCcCCHHHHhh
Confidence 34999999554 6999999999998877643
No 211
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.07 E-value=0.0062 Score=64.63 Aligned_cols=151 Identities=19% Similarity=0.210 Sum_probs=91.1
Q ss_pred CCeEEEEecCC-----ChhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCc----cccc------------cccce
Q psy9514 313 EDLFGVQLCGN-----NPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGS----GLLQ------------RANLF 371 (611)
Q Consensus 313 e~~~~vQi~g~-----~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~----~l~~------------~~~~~ 371 (611)
+.++++||.++ .++.+.++++.+.++ +|+|++|++||....+...... +++. .+.|+
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~--ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv 223 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPL--ADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAV 223 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGG--CSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEE
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhh--CCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceE
Confidence 56899999886 567778888888763 6899999999986532211111 1111 24678
Q ss_pred eeecccC-chHHHHHHHHHHHHhcccceEEeccCC---Cccc--eeccccccccc--cChHHHHHHHHHHHhhc--CCCE
Q psy9514 372 GVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGC---PIEF--IYKQGSGSGLL--QRANILQSVITCMNEVS--SLPI 441 (611)
Q Consensus 372 ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gC---P~~~--v~~~g~GsaLl--~r~~~l~eIv~av~~~~--~~Pv 441 (611)
.+-+..+ +.+++.+.|+.+. .+|+|+|-++-.- +... ....+.|+ |- .......++|+.+++.+ .+||
T Consensus 224 ~vKi~p~~~~~~~~~ia~~~~-~aGadgi~v~ntt~~r~~~~~~~~~~~~gG-lSG~~i~p~a~~~v~~i~~~v~~~ipv 301 (367)
T 3zwt_A 224 LVKIAPDLTSQDKEDIASVVK-ELGIDGLIVTNTTVSRPAGLQGALRSETGG-LSGKPLRDLSTQTIREMYALTQGRVPI 301 (367)
T ss_dssp EEEECSCCCHHHHHHHHHHHH-HHTCCEEEECCCBSCCCTTCCCTTTTSSSE-EEEGGGHHHHHHHHHHHHHHTTTCSCE
T ss_pred EEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeCCCcccccccccccccccCC-cCCcccchhHHHHHHHHHHHcCCCceE
Confidence 8888766 4457777777775 4699999986322 1000 00111222 11 11234568889999888 5787
Q ss_pred EEEEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 442 TVKTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 442 tVKiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
+.- |.-.+ .....+.+ .+|+++|.|-
T Consensus 302 I~~---GGI~s---~~da~~~l-~~GAd~V~vg 327 (367)
T 3zwt_A 302 IGV---GGVSS---GQDALEKI-RAGASLVQLY 327 (367)
T ss_dssp EEE---SSCCS---HHHHHHHH-HHTCSEEEES
T ss_pred EEE---CCCCC---HHHHHHHH-HcCCCEEEEC
Confidence 653 22122 22333344 4799998763
No 212
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.06 E-value=0.002 Score=62.91 Aligned_cols=143 Identities=11% Similarity=0.039 Sum_probs=80.3
Q ss_pred HHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh--
Q psy9514 428 SVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI-- 504 (611)
Q Consensus 428 eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~-- 504 (611)
.+|+.+++.. +.++..-+.+. +. + ..+++.+.++|+|+||+|.-.... .+..+.+.+++....
T Consensus 45 ~~i~~l~~~~p~~~v~lD~kl~--di-p--~t~~~~~~~~Gad~itvh~~~g~~---------~l~~~~~~~~~~g~~~~ 110 (216)
T 1q6o_A 45 RAVRDLKALYPHKIVLADAKIA--DA-G--KILSRMCFEANADWVTVICCADIN---------TAKGALDVAKEFNGDVQ 110 (216)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC--SC-H--HHHHHHHHHTTCSEEEEETTSCHH---------HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhCCCCeEEEEEEec--cc-H--HHHHHHHHhCCCCEEEEeccCCHH---------HHHHHHHHHHHcCCCce
Confidence 4567777763 34444333333 22 2 234557889999999999865321 122333333221111
Q ss_pred -----h--hhcchhhHhcCCceEEecc-c-cccccccCCccHHHHHHHHhhCC-CCcEEEecCCCCHHHHHHHHHcCCCc
Q psy9514 505 -----I--HNFMPKFRDWGASLITLHG-R-TREQRYTKQADWDYIEKCAQLCS-PAPLYGNGDILSYEDYTESLKKSPSI 574 (611)
Q Consensus 505 -----~--~~~~~~l~~~G~~~itihg-r-tr~g~~~~~a~~~~i~~~~k~~~-~iPVIgnGgI~s~eda~~~l~~G~~a 574 (611)
. ..-...+.+.|...+.+|- + +.+.++.+ ..+.++.+.+... ++||+..|||+ ++.+.++++.| +
T Consensus 111 ~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aG--a 185 (216)
T 1q6o_A 111 IELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIP--I 185 (216)
T ss_dssp EEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSC--C
T ss_pred eeeeeCCChhhHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcC--C
Confidence 0 1122344455655444321 1 11222222 2344444433322 67899999997 88898999887 9
Q ss_pred cEEEEcHHhhhCCch
Q psy9514 575 SGVMIGRGALIKPWI 589 (611)
Q Consensus 575 D~VmIGRgaL~dP~l 589 (611)
|.|.+||+++..++.
T Consensus 186 d~ivvG~~I~~a~dp 200 (216)
T 1q6o_A 186 HVFIAGRSIRDAASP 200 (216)
T ss_dssp SEEEESHHHHTSSCH
T ss_pred CEEEEeehhcCCCCH
Confidence 999999999986553
No 213
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=97.05 E-value=0.0059 Score=66.31 Aligned_cols=158 Identities=8% Similarity=0.053 Sum_probs=104.4
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccc-----------eecc-c-----------ccccc--ccCh
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEF-----------IYKQ-G-----------SGSGL--LQRA 423 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~-----------v~~~-g-----------~GsaL--l~r~ 423 (611)
.+....+.+.+++.+.+.++.+.+ .||..|-|..|-.-.. +..+ + -|..+ ....
T Consensus 145 v~~y~~~~~~~~e~~~~~a~~~~~-~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (440)
T 3t6c_A 145 IALYVHTDGADEVEVEDSARAKME-EGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYA 223 (440)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHHH-TTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH-cCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhH
Confidence 344445667789988888777643 4999999987642100 0000 0 00000 0114
Q ss_pred HHHHHHHHHHHhhcC--CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC
Q psy9514 424 NILQSVITCMNEVSS--LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD 501 (611)
Q Consensus 424 ~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~ 501 (611)
+...++|++||+++| ++|.|....++ +..++..++++|++.|+.+|. |-
T Consensus 224 ~~d~~~v~avR~a~G~d~~L~vDaN~~~--~~~~A~~~~~~L~~~~i~~iE-------eP-------------------- 274 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGFSVELLHDAHERI--TPINAIHMAKALEPYQLFFLE-------DP-------------------- 274 (440)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCS--CHHHHHHHHHHTGGGCCSEEE-------CS--------------------
T ss_pred HHHHHHHHHHHHhcCCCCeEEEECCCCC--CHHHHHHHHHHhhhcCCCEEE-------CC--------------------
Confidence 567888999999986 45555544444 457899999999999988874 21
Q ss_pred chhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 502 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 502 ~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
..+.+++.++++.+. .++||.+.+.+++++++.++++.+ .+|.|++--
T Consensus 275 ------------------------------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~ 322 (440)
T 3t6c_A 275 ------------------------------VAPENTEWLKMLRQQ-SSTPIAMGELFVNVNEWKPLIDNK-LIDYIRCHI 322 (440)
T ss_dssp ------------------------------SCGGGGGGHHHHHHH-CCSCEEECTTCCSHHHHHHHHHTT-CCSEECCCG
T ss_pred ------------------------------CChhhHHHHHHHHhh-cCCCEEeCcccCCHHHHHHHHHcC-Cccceeech
Confidence 112244555665554 589999999999999999999988 799999865
Q ss_pred HhhhCCc
Q psy9514 582 GALIKPW 588 (611)
Q Consensus 582 gaL~dP~ 588 (611)
+-+--..
T Consensus 323 ~~~GGit 329 (440)
T 3t6c_A 323 SSIGGIT 329 (440)
T ss_dssp GGGTSHH
T ss_pred hhhCCHH
Confidence 5544443
No 214
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.04 E-value=0.0048 Score=65.15 Aligned_cols=147 Identities=17% Similarity=0.103 Sum_probs=90.8
Q ss_pred CCeEEEEecCCChhhHHHHHHHHhhh--ccceeeeccCCCCcchhhccCCCccccc---------------cccceeeec
Q psy9514 313 EDLFGVQLCGNNPYVLTKCTQLLEEQ--MAVDFVDVNLGCPIEFIYKQGSGSGLLQ---------------RANLFGVQL 375 (611)
Q Consensus 313 e~~~~vQi~g~~p~~~~~~a~~l~~~--~~v~~idln~gcp~~~~~~~~~~~~l~~---------------~~~~~ivQi 375 (611)
+.++++||+|.+++.+..+++.+.++ .++++|++|++||.... +..|.. ...|+.+-+
T Consensus 126 ~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~g-----g~~l~~~~e~~~~il~av~~~~~~PV~vKi 200 (354)
T 4ef8_A 126 KKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPG-----KPQVAYDFDAMRQCLTAVSEVYPHSFGVKM 200 (354)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTT-----SCCGGGSHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCC-----chhhccCHHHHHHHHHHHHHhhCCCeEEEe
Confidence 57899999999999999999998843 46899999999998642 122211 146788877
Q ss_pred ccC-chHHHHHHHHHHHHhcc-cceEEe-c-----------cCCCccceeccccccccccC--hHHHHHHHHHHHhhc-C
Q psy9514 376 CGN-NPYVLTKCTQLLEEQMV-VDFVDV-N-----------LGCPIEFIYKQGSGSGLLQR--ANILQSVITCMNEVS-S 438 (611)
Q Consensus 376 ~g~-~p~~~~~aA~~l~~~~g-~D~IEL-N-----------~gCP~~~v~~~g~GsaLl~r--~~~l~eIv~av~~~~-~ 438 (611)
.-+ +...+.++++.+.+ +| +|+|-+ | ..-|.. ....++|+. -.. .....++|..+++.. +
T Consensus 201 ~p~~d~~~~~~~a~~~~~-~Gg~d~I~~~NT~~~g~~idi~~~~~~~-~~~~~~gGl-SG~~i~p~a~~~i~~v~~~~~~ 277 (354)
T 4ef8_A 201 PPYFDFAHFDAAAEILNE-FPKVQFITCINSIGNGLVIDAETESVVI-KPKQGFGGL-GGRYVLPTALANINAFYRRCPG 277 (354)
T ss_dssp CCCCSHHHHHHHHHHHHT-CTTEEEEEECCCEEEEECEETTTTEESC-SGGGGEEEE-EGGGGHHHHHHHHHHHHHHCTT
T ss_pred cCCCCHHHHHHHHHHHHh-CCCccEEEEecccCcceeeeccCCcccc-ccccccCCC-CCCCCchHHHHHHHHHHHhCCC
Confidence 765 56677788877753 45 888754 2 111100 001222221 111 234567788888775 4
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
+||+.- |. ........+.+ .+|+++|.|-
T Consensus 278 ipII~~---GG---I~s~~da~~~l-~aGAd~V~vg 306 (354)
T 4ef8_A 278 KLIFGC---GG---VYTGEDAFLHV-LAGASMVQVG 306 (354)
T ss_dssp SEEEEE---SC---CCSHHHHHHHH-HHTEEEEEEC
T ss_pred CCEEEE---CC---cCCHHHHHHHH-HcCCCEEEEh
Confidence 776553 21 12233444444 4899998764
No 215
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.03 E-value=0.013 Score=56.90 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=82.0
Q ss_pred HHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-----cccC-c
Q psy9514 429 VITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-----CSRD-N 502 (611)
Q Consensus 429 Iv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-----~~~~-~ 502 (611)
+++.+++..+.++..-+.+. +-..+....++.+.++|+|+||+|.-.... .|..+.+. +... +
T Consensus 42 ~i~~lr~~~~~~v~~D~kl~--DI~~t~~~~v~~~~~~Gad~vtvh~~~g~~---------~i~~~~~~~gv~vl~~t~~ 110 (208)
T 2czd_A 42 IIRRLKEETGVEIIADLKLA--DIPNTNRLIARKVFGAGADYVIVHTFVGRD---------SVMAVKELGEIIMVVEMSH 110 (208)
T ss_dssp HHHHHHHHHCCEEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEESTTCHH---------HHHHHHTTSEEEEECCCCS
T ss_pred HHHHHHHcCCCEEEEEeeeC--chHHHHHHHHHHHHhcCCCEEEEeccCCHH---------HHHHHHHhCCcEEEEecCC
Confidence 45566665344444443333 333555678888999999999999864321 12222221 1111 1
Q ss_pred --------hhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCH-HHHHHHHHcCCC
Q psy9514 503 --------NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSY-EDYTESLKKSPS 573 (611)
Q Consensus 503 --------~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~-eda~~~l~~G~~ 573 (611)
...+..+....++|++.+.... + ..+.++++.+.....++|..|||+.. .++.++++.|
T Consensus 111 ~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~-------~---~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aG-- 178 (208)
T 2czd_A 111 PGALEFINPLTDRFIEVANEIEPFGVIAPG-------T---RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAG-- 178 (208)
T ss_dssp GGGGTTTGGGHHHHHHHHHHHCCSEEECCC-------S---STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHT--
T ss_pred cchhhHHHHHHHHHHHHHHHhCCcEEEECC-------C---ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcC--
Confidence 1122234456677887765422 1 12344555444443467799999752 2788888887
Q ss_pred ccEEEEcHHhhhCCch
Q psy9514 574 ISGVMIGRGALIKPWI 589 (611)
Q Consensus 574 aD~VmIGRgaL~dP~l 589 (611)
+|.|.+||+++..+..
T Consensus 179 ad~vvvGr~I~~a~dp 194 (208)
T 2czd_A 179 ADYIIVGRAIYNAPNP 194 (208)
T ss_dssp CSEEEECHHHHTSSSH
T ss_pred CCEEEEChHHhcCCCH
Confidence 9999999999986553
No 216
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=97.03 E-value=0.015 Score=61.82 Aligned_cols=139 Identities=11% Similarity=0.119 Sum_probs=99.0
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRT 447 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~ 447 (611)
.++...+...+++.+.+.++.+.+ .||..|-|..|.. .++.-.+.+++|++++ ++++.|...-
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~-~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~ 201 (385)
T 3i6e_A 138 IPLSCSIANPDFDADIALMERLRA-DGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQ 201 (385)
T ss_dssp EEBEEEECCSSHHHHHHHHHHHHH-HTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHH-cCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 445555555677776655554432 3999999987652 2344567888999887 3566666555
Q ss_pred cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 448 GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 448 g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
+++ ..++.+++++|++.|+.+|- |-
T Consensus 202 ~~~--~~~A~~~~~~L~~~~i~~iE-------qP---------------------------------------------- 226 (385)
T 3i6e_A 202 GLE--IDEAVPRVLDVAQFQPDFIE-------QP---------------------------------------------- 226 (385)
T ss_dssp CCC--GGGHHHHHHHHHTTCCSCEE-------CC----------------------------------------------
T ss_pred CCC--HHHHHHHHHHHHhcCCCEEE-------CC----------------------------------------------
Confidence 554 46788999999999888763 21
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
..+.+++.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--+-+
T Consensus 227 ----~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~ 277 (385)
T 3i6e_A 227 ----VRAHHFELMARLRGL-TDVPLLADESVYGPEDMVRAAHEG-ICDGVSIKIMKS 277 (385)
T ss_dssp ----SCTTCHHHHHHHHTT-CSSCEEESTTCCSHHHHHHHHHHT-CCSEEEECHHHH
T ss_pred ----CCcccHHHHHHHHHh-CCCCEEEeCCcCCHHHHHHHHHcC-CCCEEEeccccc
Confidence 223466777777654 589999999999999999999987 799999865443
No 217
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=97.03 E-value=0.014 Score=61.97 Aligned_cols=139 Identities=13% Similarity=0.141 Sum_probs=101.0
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKi 445 (611)
..++...++..+++.+.+.++...+ .||..|-|..|. +++.-.+.+++|+++++ .++.|..
T Consensus 131 ~v~~y~t~g~~~~e~~~~~a~~~~~-~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDa 193 (379)
T 3r0u_A 131 SIVTDVSISCGNVAETIQNIQNGVE-ANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDA 193 (379)
T ss_dssp EEEBCEEECCCCHHHHHHHHHHHHH-TTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEEC
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHH-cCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeC
Confidence 4455666777788888777766543 499999988653 34556788899999986 4565554
Q ss_pred EccccCCchHHHHHHHHHHH--cCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEec
Q psy9514 446 RTGIHKDNNIIHNFMPKFRD--WGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLH 523 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~--aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itih 523 (611)
.-++ +.+++.++++.|++ .++.+|. |
T Consensus 194 N~~w--~~~~A~~~~~~l~~~~~~l~~iE-------e------------------------------------------- 221 (379)
T 3r0u_A 194 NQGW--NLAQTKQFIEEINKYSLNVEIIE-------Q------------------------------------------- 221 (379)
T ss_dssp TTCC--CHHHHHHHHHHHHTSCCCEEEEE-------C-------------------------------------------
T ss_pred CCCc--CHHHHHHHHHHHhhcCCCcEEEE-------C-------------------------------------------
Confidence 4444 35788999999999 6666542 1
Q ss_pred cccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 524 GRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 524 grtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
...+.+++.++++.+. .++||.+...++++.++.++++.+ .+|.|++--+-.
T Consensus 222 -------P~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~ 273 (379)
T 3r0u_A 222 -------PVKYYDIKAMAEITKF-SNIPVVADESVFDAKDAERVIDEQ-ACNMINIKLAKT 273 (379)
T ss_dssp -------CSCTTCHHHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHTT-CCSEEEECHHHH
T ss_pred -------CCCcccHHHHHHHHhc-CCCCEEeCCccCCHHHHHHHHHcC-CCCEEEECcccc
Confidence 1223456777777665 489999999999999999999987 799999854433
No 218
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=96.98 E-value=0.0051 Score=64.77 Aligned_cols=155 Identities=15% Similarity=0.096 Sum_probs=87.7
Q ss_pred cCCCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchhhccC-CCcccc----c-----cccceeeecccC-c
Q psy9514 311 ESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQG-SGSGLL----Q-----RANLFGVQLCGN-N 379 (611)
Q Consensus 311 ~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~-~~~~l~----~-----~~~~~ivQi~g~-~ 379 (611)
..+.++++||+|..++.+..+++.+.+.+..++|++|++||.......- ...+++ . ...|+.+-+.-+ +
T Consensus 126 ~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~ 205 (345)
T 3oix_A 126 PDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFD 205 (345)
T ss_dssp TTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCC
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 3467899999999999999999998765544599999999986521000 011111 0 146788887765 5
Q ss_pred hHHHHHHHHHHHHhcccceE----------EeccCCCccceecccccccc-ccChHHHHHHHHHHHhhc--CCCEEEEEE
Q psy9514 380 PYVLTKCTQLLEEQMVVDFV----------DVNLGCPIEFIYKQGSGSGL-LQRANILQSVITCMNEVS--SLPITVKTR 446 (611)
Q Consensus 380 p~~~~~aA~~l~~~~g~D~I----------ELN~gCP~~~v~~~g~GsaL-l~r~~~l~eIv~av~~~~--~~PvtVKiR 446 (611)
..+++++++.+. ..++++| +|+..-|.. ....++|+.- -.......++|..+++.+ ++||+.-
T Consensus 206 ~~~~a~~~~~ag-a~~i~~int~nt~g~~~~i~~~~~~~-~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~-- 281 (345)
T 3oix_A 206 IVHFDQAAAIFN-XYPLTFVNCINSIGNGLVIEDETVVI-XPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGT-- 281 (345)
T ss_dssp HHHHHHHHHHHT-TSCCSEEEECCCEEEEECEETTEESC-SGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEE--
T ss_pred HHHHHHHHHHhC-CCceEEEEeecccccceeeccCcccc-ccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEE--
Confidence 566666665552 1234433 233111210 0011222211 112334568888999888 4776553
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
|.- .......+.+ .+|+++|.|-
T Consensus 282 -GGI---~s~~da~~~l-~aGAd~V~ig 304 (345)
T 3oix_A 282 -GGV---XTGRDAFEHI-LCGASMVQIG 304 (345)
T ss_dssp -SSC---CSHHHHHHHH-HHTCSEEEES
T ss_pred -CCC---CChHHHHHHH-HhCCCEEEEC
Confidence 221 2233344444 4799998763
No 219
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=96.98 E-value=0.007 Score=59.77 Aligned_cols=123 Identities=20% Similarity=0.175 Sum_probs=83.4
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEE--EccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKT--RTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKi--R~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.|+|.||+.. .+|..+..+.+.+.+-+.++++.++.+ .+|+ =++.- +.+.....++...++|+|+|
T Consensus 83 ~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l-~~e~i~~a~~ia~eaGADfV 150 (220)
T 1ub3_A 83 RGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYF-SPEEIARLAEAAIRGGADFL 150 (220)
T ss_dssp TTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGS-CHHHHHHHHHHHHHHTCSEE
T ss_pred cCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCC-CHHHHHHHHHHHHHhCCCEE
Confidence 4999999852 135445567788888888888887533 4453 33332 23456667777889999998
Q ss_pred EEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc---cHHHHHHHHhhCC
Q psy9514 472 TLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA---DWDYIEKCAQLCS 548 (611)
Q Consensus 472 tvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a---~~~~i~~~~k~~~ 548 (611)
-.+-+. ..+.+ +...+++.. ..
T Consensus 151 KTsTGf-----------------------------------------------------~~~gat~~dv~~m~~~v--g~ 175 (220)
T 1ub3_A 151 KTSTGF-----------------------------------------------------GPRGASLEDVALLVRVA--QG 175 (220)
T ss_dssp ECCCSS-----------------------------------------------------SSCCCCHHHHHHHHHHH--TT
T ss_pred EeCCCC-----------------------------------------------------CCCCCCHHHHHHHHHhh--CC
Confidence 654211 01222 233334433 34
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCcc--EEEEcHHhhh
Q psy9514 549 PAPLYGNGDILSYEDYTESLKKSPSIS--GVMIGRGALI 585 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~G~~aD--~VmIGRgaL~ 585 (611)
++||.+.|||.|.+++.++++.| ++ |+..||.++.
T Consensus 176 ~v~VkaaGGirt~~~al~~i~aG--a~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 176 RAQVKAAGGIRDRETALRMLKAG--ASRLGTSSGVALVA 212 (220)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTT--CSEEEETTHHHHHC
T ss_pred CCeEEEECCCCCHHHHHHHHHCC--CcccchhHHHHHHH
Confidence 79999999999999999999987 99 8888887553
No 220
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=96.98 E-value=0.0002 Score=60.09 Aligned_cols=57 Identities=19% Similarity=0.420 Sum_probs=44.1
Q ss_pred CcccCCcccccCCCCCCCCCCC-CCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCcc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGE-KCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGSS 136 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~-~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~ 136 (611)
.....|..|.++ .|..|| .|+|+|+.....-. ..-...|..| ..|.|..+ .|+|...
T Consensus 7 ~~~~VCr~FlrG----~C~r~d~~C~f~H~~~~~~~~--~~~~~vC~df-lkG~C~r~-~C~y~H~ 64 (83)
T 3d2n_A 7 LTLEVCREFQRG----TCSRPDTECKFAHPSKSCQVE--NGRVIACFDS-LKGRCSRE-NCKYLHP 64 (83)
T ss_dssp GEEEBCTTGGGT----CCCSCTTTCSSBCCCTTCCEE--TTEEECCHHH-HTTCCCCS-SCSSCCC
T ss_pred ccchhcHHHhcC----CCCCCCCCCCCcCCCcccccc--CCceeehhHh-hhccccCC-CcceeCC
Confidence 457889999996 599997 89999997643211 1224699999 55999999 9999954
No 221
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=96.97 E-value=0.012 Score=62.68 Aligned_cols=143 Identities=10% Similarity=0.043 Sum_probs=101.7
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKi 445 (611)
..++...+...+++.+.+.++.+. ..||..|-|..|++-. ..+++.-.+.+++|++++|. ++.|..
T Consensus 134 ~v~~y~s~~~~~~e~~~~~a~~~~-~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vDa 201 (386)
T 3fv9_G 134 PVPVISSIGGDTPEAMRAKVARHR-AQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLADA 201 (386)
T ss_dssp CBCEEEEECSCCHHHHHHHHHHHH-HTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred ceeeeEecCCCCHHHHHHHHHHHH-HCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 456666777789998888877764 3599999999998621 12356667889999999864 555554
Q ss_pred EccccCCchHHHHHHHHH-HHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 446 RTGIHKDNNIIHNFMPKF-RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l-~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
.-++ +..++.+++++| +..++ +|- |-
T Consensus 202 N~~~--~~~~A~~~~~~l~~~~~i-~iE-------eP------------------------------------------- 228 (386)
T 3fv9_G 202 NNGL--TVEHALRMLSLLPPGLDI-VLE-------AP------------------------------------------- 228 (386)
T ss_dssp TTCC--CHHHHHHHHHHSCSSCCC-EEE-------CC-------------------------------------------
T ss_pred CCCC--CHHHHHHHHHHhhccCCc-EEe-------cC-------------------------------------------
Confidence 4444 346788888888 55555 431 11
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
.++++.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--+-+--
T Consensus 229 ---------~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GG 279 (386)
T 3fv9_G 229 ---------CASWAETKSLRAR-CALPLLLDELIQTETDLIAAIRDD-LCDGVGLKVSKQGG 279 (386)
T ss_dssp ---------CSSHHHHHHHHTT-CCSCEEESTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTS
T ss_pred ---------CCCHHHHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHhC-CCCEEEECccccCC
Confidence 1156666776554 589999999999999999999987 79999986544433
No 222
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=96.93 E-value=0.021 Score=60.59 Aligned_cols=149 Identities=9% Similarity=-0.026 Sum_probs=98.1
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
.++...+...+++...+.++...+..||..|-|..|.. .++.-.+.|++|+++++ +++.|...
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 34444444456655444333332234899998887653 24555778899999886 45555544
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ ..++.+++++|++.|+.+|- |-
T Consensus 202 ~~~~--~~~A~~~~~~l~~~~i~~iE-------eP--------------------------------------------- 227 (381)
T 3fcp_A 202 QAWD--AATGAKGCRELAAMGVDLIE-------QP--------------------------------------------- 227 (381)
T ss_dssp TCBC--HHHHHHHHHHHHHTTCSEEE-------CC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHHhhcCcccee-------CC---------------------------------------------
Confidence 4443 46789999999999887762 21
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+.+++.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--+-+-...-+.+|
T Consensus 228 -----~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~-a~d~v~~k~~~~GGit~~~~i 287 (381)
T 3fcp_A 228 -----VSAHDNAALVRLSQQ-IETAILADEAVATAYDGYQLAQQG-FTGAYALKIAKAGGPNSVLAL 287 (381)
T ss_dssp -----BCTTCHHHHHHHHHH-SSSEEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSTTHHHHH
T ss_pred -----CCcccHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHcC-CCCEEEecccccCCHHHHHHH
Confidence 233466777777665 489999999999999999999987 799999966555544444333
No 223
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=96.91 E-value=0.017 Score=61.47 Aligned_cols=138 Identities=12% Similarity=0.121 Sum_probs=95.8
Q ss_pred ceeeecccCchHHH-HHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEE
Q psy9514 370 LFGVQLCGNNPYVL-TKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTR 446 (611)
Q Consensus 370 ~~ivQi~g~~p~~~-~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR 446 (611)
++...+...+++.. .++++.+ +..||..|-|..|.. .++.-.+.+++|+++++ +++.|...
T Consensus 139 ~~~~t~~~~~~~~~~~~~~~~~-~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 139 PVAWTLASGDTAKDIAEAQKML-DLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EBCEEECSSCHHHHHHHHHHHH-HTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eEEEEecCCChHHHHHHHHHHH-HhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 33334444455544 4444444 335899999887653 24445678899999885 56666655
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
-+++ ..++..++++|++.|+.+|. |-
T Consensus 203 ~~~~--~~~A~~~~~~l~~~~i~~iE-------qP--------------------------------------------- 228 (382)
T 3dgb_A 203 QAWD--EAVALRACRILGGNGIDLIE-------QP--------------------------------------------- 228 (382)
T ss_dssp TCBC--HHHHHHHHHHHHTTTCCCEE-------CC---------------------------------------------
T ss_pred CCCC--HHHHHHHHHHHhhcCcCeee-------CC---------------------------------------------
Confidence 5553 46788999999998887653 11
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
..+.+++.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--.-+
T Consensus 229 -----~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~ 279 (382)
T 3dgb_A 229 -----ISRNNRAGMVRLNAS-SPAPIMADESIECVEDAFNLAREG-AASVFALKIAKN 279 (382)
T ss_dssp -----BCTTCHHHHHHHHHH-CSSCEEESTTCSSHHHHHHHHHHT-CCSEEEECHHHH
T ss_pred -----CCccCHHHHHHHHHh-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEeccccc
Confidence 233466777777665 489999999999999999999987 799999864443
No 224
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.87 E-value=0.0096 Score=58.43 Aligned_cols=175 Identities=13% Similarity=0.040 Sum_probs=105.5
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.+++.=+-+.+++++...++.+. ..|++.|||-.--| ...+.++.+++..+ .+.+.. |
T Consensus 16 ~~~i~v~r~~~~~~~~~~~~al~-~gGv~~iel~~k~~------------------~~~~~i~~l~~~~~-~~~vga--g 73 (214)
T 1wbh_A 16 GPVVPVIVVKKLEHAVPMAKALV-AGGVRVLNVTLRTE------------------CAVDAIRAIAKEVP-EAIVGA--G 73 (214)
T ss_dssp CSEEEEECCSSGGGHHHHHHHHH-HTTCCEEEEESCST------------------THHHHHHHHHHHCT-TSEEEE--E
T ss_pred CCEEEEEECCCHHHHHHHHHHHH-HcCCCEEEEeCCCh------------------hHHHHHHHHHHHCc-CCEEee--C
Confidence 45566666778888888887775 35899999964222 01346666666553 233332 2
Q ss_pred ccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-cccC-chhhhhcchhhHhcCCceEEecccc
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-CSRD-NNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-~~~~-~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
.--. .+-++.+.++|+++|++-+... +.+..+..+ +... --.+.+.+....+.|++.+.++.-
T Consensus 74 tvi~----~d~~~~A~~aGAd~v~~p~~d~----------~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa- 138 (214)
T 1wbh_A 74 TVLN----PQQLAEVTEAGAQFAISPGLTE----------PLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPA- 138 (214)
T ss_dssp SCCS----HHHHHHHHHHTCSCEEESSCCH----------HHHHHHHHSSSCEEEEESSHHHHHHHHHTTCCEEEETTT-
T ss_pred EEEE----HHHHHHHHHcCCCEEEcCCCCH----------HHHHHHHHhCCCEEEecCCHHHHHHHHHCCCCEEEEecC-
Confidence 2111 1446677888999987543221 111111111 0000 001122234556789999988551
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.......+++.+....+++||++.||| |++.+.+++..| ++++|. |.++...+.
T Consensus 139 -----~~~gG~~~lk~i~~~~~~ipvvaiGGI-~~~n~~~~l~ag-g~~~v~-gS~i~~~~~ 192 (214)
T 1wbh_A 139 -----EANGGVKALQAIAGPFSQVRFCPTGGI-SPANYRDYLALK-SVLCIG-GSWLVPADA 192 (214)
T ss_dssp -----TTTTHHHHHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTST-TBSCEE-EGGGSCHHH
T ss_pred -----ccccCHHHHHHHhhhCCCCeEEEECCC-CHHHHHHHHhcC-CCeEEE-eccccChhh
Confidence 111135788888776668999999999 579999999985 599999 877765553
No 225
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=96.86 E-value=0.0095 Score=63.66 Aligned_cols=129 Identities=15% Similarity=0.010 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHhcccceEEec-cCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCchHHHH
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVN-LGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNNIIHN 458 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN-~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~~a~~ 458 (611)
.+.+.++.+. ..||..|-|+ .|-+ ..+++.-.+++++|++++|. ++.|...-++. +.+++.+
T Consensus 155 ~~~~~a~~~~-~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~-~~~~A~~ 219 (394)
T 3mqt_A 155 AYKPLIAKAK-ERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWT-DWQKARW 219 (394)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCS-CHHHHHH
T ss_pred HHHHHHHHHH-HcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCC-CHHHHHH
Confidence 3444444433 3499998884 3311 12467778899999999864 55554333331 4477899
Q ss_pred HHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH
Q psy9514 459 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD 538 (611)
Q Consensus 459 la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~ 538 (611)
+++.|++.|+++|. |. ..+.+++
T Consensus 220 ~~~~L~~~~i~~iE-------eP--------------------------------------------------~~~~~~~ 242 (394)
T 3mqt_A 220 TFRQLEDIDLYFIE-------AC--------------------------------------------------LQHDDLI 242 (394)
T ss_dssp HHHHTGGGCCSEEE-------SC--------------------------------------------------SCTTCHH
T ss_pred HHHHHhhcCCeEEE-------CC--------------------------------------------------CCcccHH
Confidence 99999999998873 21 1233566
Q ss_pred HHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 539 YIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 539 ~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.++++.+. .++||++.+.++|++++.++++.+ .+|.|++--+-+
T Consensus 243 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~~~~ 286 (394)
T 3mqt_A 243 GHQKLAAA-INTRLCGAEMSTTRFEAQEWLEKT-GISVVQSDYNRC 286 (394)
T ss_dssp HHHHHHHH-SSSEEEECTTCCHHHHHHHHHHHH-CCSEECCCTTTS
T ss_pred HHHHHHhh-CCCCEEeCCCcCCHHHHHHHHHcC-CCCeEecCcccc
Confidence 67776665 589999999999999999999987 799999854433
No 226
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=96.86 E-value=0.017 Score=61.71 Aligned_cols=139 Identities=7% Similarity=-0.052 Sum_probs=98.8
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-C--CEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-L--PITVK 444 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~--PvtVK 444 (611)
..++...+...+++.+.+.++.+.+ .||..|-|..|++ +++.-.+.+++|+++++ . ++.|.
T Consensus 153 ~v~~y~s~~~~~~e~~~~~a~~~~~-~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vD 216 (391)
T 4e8g_A 153 RVPSYYATGIGQPDEIARIAAEKVA-EGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVD 216 (391)
T ss_dssp EEECCEEECSCCHHHHHHHHHHHHH-TTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEE
T ss_pred cEEEeEEcCCCCHHHHHHHHHHHHH-cCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEe
Confidence 3455566677789988887776643 5999999998763 24455678889988775 4 44444
Q ss_pred EEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 445 TRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 445 iR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
..-++ +..++..++++|++.++ +| +|-
T Consensus 217 aN~~w--~~~~A~~~~~~L~~~~i-~i-------EeP------------------------------------------- 243 (391)
T 4e8g_A 217 GNRSL--PSRDALRLSRECPEIPF-VL-------EQP------------------------------------------- 243 (391)
T ss_dssp CTTCC--CHHHHHHHHHHCTTSCE-EE-------ESC-------------------------------------------
T ss_pred CCCCC--CHHHHHHHHHHHhhcCe-EE-------ecC-------------------------------------------
Confidence 33344 34678888998888776 54 211
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
..+++.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--+-+--
T Consensus 244 ---------~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~-a~d~v~ik~~~~GG 294 (391)
T 4e8g_A 244 ---------CNTLEEIAAIRGR-VQHGIYLDESGEDLSTVIRAAGQG-LCDGFGMKLTRIGG 294 (391)
T ss_dssp ---------SSSHHHHHHHGGG-CCSCEEESTTCCSHHHHHHHHHTT-CCSEEEEEHHHHTS
T ss_pred ---------CccHHHHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEeCccccCC
Confidence 1355666666554 589999999999999999999987 79999986544433
No 227
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.85 E-value=0.016 Score=57.73 Aligned_cols=183 Identities=12% Similarity=0.061 Sum_probs=108.6
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceE--EeccCC--CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEE
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFV--DVNLGC--PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTR 446 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~I--ELN~gC--P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR 446 (611)
+..++...+...+.+..+.+. ..|+|.+ |+--|+ | .. .+| ..+++.+++.+.. -+++=
T Consensus 16 i~psila~D~~~l~~~i~~~~-~~gad~lhvDvmDG~fvp---n~--t~G----------~~~v~~lr~~~~~--DvhLM 77 (237)
T 3cu2_A 16 LSVGILSANWLQLNEEVTTLL-ENQINVLHFDIADGQFSS---LF--TVG----------AIGIKYFPTHCFK--DVHLM 77 (237)
T ss_dssp EEEEGGGSCGGGHHHHHHHHH-HTTCCEEEEEEEBSSSSS---CB--CBC----------THHHHTSCTTSEE--EEEEE
T ss_pred EEEeeeeCCcccHHHHHHHHH-HcCCCEEEEEEecCcccc---ch--hhh----------HHHHHHHhhhCCC--CeEEE
Confidence 456777777767777777664 3477764 332344 4 21 122 2567777776532 44432
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC---------chh---------hhhc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD---------NNI---------IHNF 508 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~---------~~~---------~~~~ 508 (611)
+ + ....+++.+.++|++.||+|.-... .+..+.+.++.. ... ..+.
T Consensus 78 v---~---~p~~~i~~~~~aGAd~itvH~ea~~----------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~ 141 (237)
T 3cu2_A 78 V---R---NQLEVAKAVVANGANLVTLQLEQYH----------DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISE 141 (237)
T ss_dssp C---S---CHHHHHHHHHHTTCSEEEEETTCTT----------SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGG
T ss_pred E---E---CHHHHHHHHHHcCCCEEEEecCCcc----------cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHH
Confidence 1 1 1257899999999999999986521 123344444443 111 1111
Q ss_pred chhhHhcCCceEEe---ccccccccccCCccHHHHHHHHhhC----CCCcEEEecCCCCHHHHHHHHH--cCCCccEEEE
Q psy9514 509 MPKFRDWGASLITL---HGRTREQRYTKQADWDYIEKCAQLC----SPAPLYGNGDILSYEDYTESLK--KSPSISGVMI 579 (611)
Q Consensus 509 ~~~l~~~G~~~iti---hgrtr~g~~~~~a~~~~i~~~~k~~----~~iPVIgnGgI~s~eda~~~l~--~G~~aD~VmI 579 (611)
+..+. .+++.|.+ +..+..+.+ .+...+.++++.+.. .++||..-|||+ .+.+.++++ .| +|.+++
T Consensus 142 l~~~l-~~~D~vlvMsv~pgfggq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aG--ad~~Vv 216 (237)
T 3cu2_A 142 LEPYL-DQIDVIQLLTLDPRNGTKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQ--IDWLVS 216 (237)
T ss_dssp GTTTT-TTCSEEEEESEETTTTEECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSC--CCCEEE
T ss_pred HHHHh-hcCceeeeeeeccCcCCeec-ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCC--CcEEEE
Confidence 11211 26888844 555443322 223345555554433 258999999995 899999999 87 999999
Q ss_pred cHHhhhCCchHHHH
Q psy9514 580 GRGALIKPWIFQEI 593 (611)
Q Consensus 580 GRgaL~dP~lf~ei 593 (611)
|++++.. +.-+.+
T Consensus 217 GSaIf~~-d~~~~~ 229 (237)
T 3cu2_A 217 GSALFSG-ELKTNL 229 (237)
T ss_dssp CGGGGSS-CHHHHH
T ss_pred eeHHhCC-CHHHHH
Confidence 9999874 433333
No 228
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.80 E-value=0.0035 Score=61.09 Aligned_cols=150 Identities=11% Similarity=0.055 Sum_probs=88.8
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|++.|++-. + . ...+.+.++++.+....+.++.| ++.. +.+.++|++.|++
T Consensus 25 ~Gv~~v~lr~--k------~-------~~~~~~~~~i~~l~~~~~~~liv------nd~~-------~~A~~~gadgvhl 76 (210)
T 3ceu_A 25 EGLDILHLRK--P------E-------TPAMYSERLLTLIPEKYHRRIVT------HEHF-------YLKEEFNLMGIHL 76 (210)
T ss_dssp TTCCEEEECC--S------S-------CCHHHHHHHHHHSCGGGGGGEEE------SSCT-------THHHHTTCSEEEC
T ss_pred CCCCEEEEcc--C------C-------CCHHHHHHHHHHHHHHhCCeEEE------eCCH-------HHHHHcCCCEEEE
Confidence 4888888752 1 0 12334455666666556777766 1221 4556789999987
Q ss_pred EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc----ccccccCCccHHHHHHHHhhC-C
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT----REQRYTKQADWDYIEKCAQLC-S 548 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt----r~g~~~~~a~~~~i~~~~k~~-~ 548 (611)
......... ..+. .+.-.-....+ +.... .|++++.+.... +.+ +..+..|++++++.+.. .
T Consensus 77 ~~~~~~~~~--~~~~--------~ig~s~~t~~e-~~~A~-~GaDyv~~g~vf~t~sk~~-~~~~~g~~~l~~~~~~~~~ 143 (210)
T 3ceu_A 77 NARNPSEPH--DYAG--------HVSCSCHSVEE-VKNRK-HFYDYVFMSPIYDSISKVN-YYSTYTAEELREAQKAKII 143 (210)
T ss_dssp CSSSCSCCT--TCCS--------EEEEEECSHHH-HHTTG-GGSSEEEECCCC----------CCCCHHHHHHHHHTTCS
T ss_pred Ccccccccc--ccCC--------EEEEecCCHHH-HHHHh-hCCCEEEECCcCCCCCCCC-CCCCCCHHHHHHHHHhcCC
Confidence 543321100 0000 00000001111 22234 799999764431 222 22356789998887653 5
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 549 PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
++|||+.|||+ ++.+.++++.| +++|.+++++...+
T Consensus 144 ~iPviaiGGI~-~~nv~~~~~~G--a~gVav~s~i~~~~ 179 (210)
T 3ceu_A 144 DSKVMALGGIN-EDNLLEIKDFG--FGGAVVLGDLWNKF 179 (210)
T ss_dssp STTEEEESSCC-TTTHHHHHHTT--CSEEEESHHHHTTC
T ss_pred CCCEEEECCCC-HHHHHHHHHhC--CCEEEEhHHhHcCC
Confidence 89999999997 99999999987 99999999998644
No 229
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=96.78 E-value=0.011 Score=63.48 Aligned_cols=150 Identities=19% Similarity=0.188 Sum_probs=88.8
Q ss_pred CCeEEEEecCCC-----hhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCcccc--------c-------------
Q psy9514 313 EDLFGVQLCGNN-----PYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLL--------Q------------- 366 (611)
Q Consensus 313 e~~~~vQi~g~~-----p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~--------~------------- 366 (611)
..++++||.++. ++.+..+++.+.++ +|+|++|++||...........+.+ .
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~--ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~ 258 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRY--ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMND 258 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGG--CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCH
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhh--CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccc
Confidence 357899999887 67788888888776 7999999999986533211221111 1
Q ss_pred --------cccc-eeeecccC-chHHHHHHHHHHHHhcccceEEeccCCCcc-c-----eeccccccccccChHHHHHHH
Q psy9514 367 --------RANL-FGVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGCPIE-F-----IYKQGSGSGLLQRANILQSVI 430 (611)
Q Consensus 367 --------~~~~-~ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gCP~~-~-----v~~~g~GsaLl~r~~~l~eIv 430 (611)
...| +.+-+.-+ +.+++.+.|+.+. .+|+|+|-+.-.-... . ....|+.+.. ......++|
T Consensus 259 ~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~-~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a--~~p~al~~I 335 (415)
T 3i65_A 259 EFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLL-ETNIDGMIISNTTTQINDIKSFENKKGGVSGAK--LKDISTKFI 335 (415)
T ss_dssp HHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHH-HHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGG--GHHHHHHHH
T ss_pred cccccccCCCCCeEEEEecCCCCHHHHHHHHHHHH-HcCCcEEEEeCCCcccccccccccccCCcCCcc--chHHHHHHH
Confidence 1356 78888877 3446777777775 4699999875322100 0 0012221111 124566888
Q ss_pred HHHHhhc--CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 431 TCMNEVS--SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 431 ~av~~~~--~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
+.+++.+ .+||+. .|.- .......+.+. +|+++|.|-
T Consensus 336 ~~v~~~v~~~iPIIg---~GGI---~s~eDa~e~l~-aGAd~VqIg 374 (415)
T 3i65_A 336 CEMYNYTNKQIPIIA---SGGI---FSGLDALEKIE-AGASVCQLY 374 (415)
T ss_dssp HHHHHHTTTCSCEEE---CSSC---CSHHHHHHHHH-HTEEEEEES
T ss_pred HHHHHHhCCCCCEEE---ECCC---CCHHHHHHHHH-cCCCEEEEc
Confidence 8888888 478765 2322 22334444444 799998763
No 230
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=96.77 E-value=0.01 Score=63.38 Aligned_cols=126 Identities=8% Similarity=-0.039 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhcccceEEec-cCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCchHHHH
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVN-LGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNNIIHN 458 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN-~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~~a~~ 458 (611)
.+.+.++.+. ..||..|-|+ .|-+ ..+++.-.+++++|++++|. ++.|...-++. +.+++.+
T Consensus 160 ~~~~~a~~~~-~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~-~~~~A~~ 224 (394)
T 3mkc_A 160 GYAPLLEKAK-AHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFT-DWYEVAR 224 (394)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCC-CHHHHHH
T ss_pred HHHHHHHHHH-HcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCC-CHHHHHH
Confidence 3444444443 3489998884 3321 12466778899999999864 45444333331 4477899
Q ss_pred HHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH
Q psy9514 459 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD 538 (611)
Q Consensus 459 la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~ 538 (611)
++++|++.|+++|. |. ..+.+++
T Consensus 225 ~~~~L~~~~i~~iE-------eP--------------------------------------------------~~~~d~~ 247 (394)
T 3mkc_A 225 LLNSIEDLELYFAE-------AT--------------------------------------------------LQHDDLS 247 (394)
T ss_dssp HHHHTGGGCCSEEE-------SC--------------------------------------------------SCTTCHH
T ss_pred HHHHhhhcCCeEEE-------CC--------------------------------------------------CCchhHH
Confidence 99999999998763 11 1233566
Q ss_pred HHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 539 YIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 539 ~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
.++++.+. .++||++.+.+++++++.++++.+ .+|.|++--
T Consensus 248 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-~~d~v~~k~ 288 (394)
T 3mkc_A 248 GHAKLVEN-TRSRICGAEMSTTRFEAEEWITKG-KVHLLQSDY 288 (394)
T ss_dssp HHHHHHHH-CSSCBEECTTCCHHHHHHHHHHTT-CCSEECCCT
T ss_pred HHHHHHhh-CCCCEEeCCCCCCHHHHHHHHHcC-CCCeEecCc
Confidence 67776665 589999999999999999999998 799999853
No 231
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=96.71 E-value=0.028 Score=57.44 Aligned_cols=180 Identities=11% Similarity=0.140 Sum_probs=113.0
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGI 449 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~ 449 (611)
.+.+.++..+.+.+..|.+ .|+|-|||+.+-..+ .|.-. ..+++.+++.+++||-+-||.-.
T Consensus 39 ~~~lEvc~~s~~~a~~A~~-----gGAdRIELc~~l~~G---------GlTPS----~g~i~~a~~~~~ipV~vMIRPRg 100 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVNAER-----GGADRIELCSGLSEG---------GTTPS----MGVLQVVKQSVQIPVFVMIRPRG 100 (287)
T ss_dssp CSEEEEEESSHHHHHHHHH-----HTCSEEEECBCGGGT---------CBCCC----HHHHHHHHTTCCSCEEEECCSSS
T ss_pred CceEEEEeCCHHHHHHHHH-----hCCCEEEECCCCCCC---------CCCCC----HHHHHHHHHhcCCCeEEEEecCC
Confidence 5788999999999888743 399999997443211 11112 23456666777899999998632
Q ss_pred cC------CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC----chh------hhhcchhhH
Q psy9514 450 HK------DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD----NNI------IHNFMPKFR 513 (611)
Q Consensus 450 ~~------~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~----~~~------~~~~~~~l~ 513 (611)
.+ +......-++.+.++|++.|+++.=+... .-|.+...++....... |.- .....+.+.
T Consensus 101 GdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg----~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li 176 (287)
T 3iwp_A 101 GDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDG----HIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLL 176 (287)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS----CBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC----CcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHH
Confidence 21 12345566778889999999887532221 12444444443332221 111 112345677
Q ss_pred hcCCceEEeccccccccccCCccHHHHHHHHhhC-CCCcEEEecCCCCHHHHHHHHH-cCCCccEEE
Q psy9514 514 DWGASLITLHGRTREQRYTKQADWDYIEKCAQLC-SPAPLYGNGDILSYEDYTESLK-KSPSISGVM 578 (611)
Q Consensus 514 ~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~-~~iPVIgnGgI~s~eda~~~l~-~G~~aD~Vm 578 (611)
+.|++.|..+|... ......+.++++++.. .+|+|++-||| +++.+.++++ .| ++.+=
T Consensus 177 ~lGvdrILTSG~~~----~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV-~~~Ni~~l~~~tG--~~~~H 236 (287)
T 3iwp_A 177 TLGFERVLTSGCDS----SALEGLPLIKRLIEQAKGRIVVMPGGGI-TDRNLQRILEGSG--ATEFH 236 (287)
T ss_dssp HHTCSEEEECTTSS----STTTTHHHHHHHHHHHTTSSEEEECTTC-CTTTHHHHHHHHC--CSEEE
T ss_pred HcCCCEEECCCCCC----ChHHhHHHHHHHHHHhCCCCEEEECCCc-CHHHHHHHHHhhC--CCEEe
Confidence 78999998777522 1234567777776554 46999999999 5788888877 55 76663
No 232
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=96.71 E-value=0.017 Score=62.83 Aligned_cols=151 Identities=18% Similarity=0.222 Sum_probs=90.8
Q ss_pred CCeEEEEecCCC-----hhhHHHHHHHHhhhccceeeeccCCCCcchhhccCCCcc----cc------------------
Q psy9514 313 EDLFGVQLCGNN-----PYVLTKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSG----LL------------------ 365 (611)
Q Consensus 313 e~~~~vQi~g~~-----p~~~~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~----l~------------------ 365 (611)
..++++||.++. ++.+..+++.+.+ .+|+|++|++||...........+ ++
T Consensus 179 ~~~vgvni~~~~~~~~~~~dy~~~a~~l~~--~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~ 256 (443)
T 1tv5_A 179 KHIVGVSIGKNKDTVNIVDDLKYCINKIGR--YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMND 256 (443)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGG--GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC-------
T ss_pred CceEEEEecCcccchHHHHHHHHHHHHHhc--CCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCcccc
Confidence 357999999998 7778888888876 489999999999854110000000 00
Q ss_pred -------------------------------------ccccc-eeeecccC-chHHHHHHHHHHHHhcccceEEeccCCC
Q psy9514 366 -------------------------------------QRANL-FGVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGCP 406 (611)
Q Consensus 366 -------------------------------------~~~~~-~ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gCP 406 (611)
..+.| +++-+..+ +.+++.+.|+.+. ..|+|+|-+.-+-.
T Consensus 257 g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~-~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 257 ESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLL-ETNIDGMIISNTTT 335 (443)
T ss_dssp -------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHH-HTTCSEEEECCCBS
T ss_pred ccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence 02456 78888776 4557777787775 46999999865432
Q ss_pred ccc-e--eccccccccccC--hHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 407 IEF-I--YKQGSGSGLLQR--ANILQSVITCMNEVS--SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 407 ~~~-v--~~~g~GsaLl~r--~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
... . ...+.|+. -.. .....++++.+++.+ ++||+.- |.-.+ .....+.+ .+|+++|.+-
T Consensus 336 ~~~d~~~~~~~~GGl-SG~~~~~~sl~~i~~v~~~v~~~iPVIg~---GGI~s---~~DA~e~l-~aGAd~Vqig 402 (443)
T 1tv5_A 336 QINDIKSFENKKGGV-SGAKLKDISTKFICEMYNYTNKQIPIIAS---GGIFS---GLDALEKI-EAGASVCQLY 402 (443)
T ss_dssp CCCCCGGGTTCCSEE-EEHHHHHHHHHHHHHHHHHTTTCSCEEEE---SSCCS---HHHHHHHH-HTTEEEEEES
T ss_pred ccccccccccccCCc-CCCcchHHHHHHHHHHHHHcCCCCcEEEE---CCCCC---HHHHHHHH-HcCCCEEEEc
Confidence 100 0 00112221 111 123467888998888 6887663 22122 22333333 4899998763
No 233
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.70 E-value=0.015 Score=57.39 Aligned_cols=173 Identities=10% Similarity=0.060 Sum_probs=103.7
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGI 449 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~ 449 (611)
+++.=+.+.+++++...++.+. ..|++.|||-+--| ...+.++.+++... .+.+.. |.
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~-~gGv~~iel~~k~~------------------~~~~~i~~l~~~~~-~l~vga--Gt 75 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLA-KNGLSVAEITFRSE------------------AAADAIRLLRANRP-DFLIAA--GT 75 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHH-HTTCCEEEEETTST------------------THHHHHHHHHHHCT-TCEEEE--ES
T ss_pred CeEEEEeCCCHHHHHHHHHHHH-HcCCCEEEEeccCc------------------hHHHHHHHHHHhCc-CcEEee--Cc
Confidence 3444455677777888877775 35899999953222 12346666666553 344433 22
Q ss_pred cCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc--hhhhhcchhhHhcCCceEEeccccc
Q psy9514 450 HKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN--NIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 450 ~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~--~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
--. .+-++.+.++|+++|++-+.. -+.+..+..+=...- -.+...+....+.|++.|-++.-
T Consensus 76 vl~----~d~~~~A~~aGAd~v~~p~~d----------~~v~~~ar~~g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fpa-- 139 (224)
T 1vhc_A 76 VLT----AEQVVLAKSSGADFVVTPGLN----------PKIVKLCQDLNFPITPGVNNPMAIEIALEMGISAVKFFPA-- 139 (224)
T ss_dssp CCS----HHHHHHHHHHTCSEEECSSCC----------HHHHHHHHHTTCCEECEECSHHHHHHHHHTTCCEEEETTT--
T ss_pred Eee----HHHHHHHHHCCCCEEEECCCC----------HHHHHHHHHhCCCEEeccCCHHHHHHHHHCCCCEEEEeeC--
Confidence 111 144667788999998543221 122222222100000 01122334566789999988541
Q ss_pred cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 528 EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 528 ~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
.......+++++.....++||++.||| +++.+.+++..+ ++++|. |.++...+
T Consensus 140 ----~~~gG~~~lk~l~~~~~~ipvvaiGGI-~~~N~~~~l~ag-ga~~v~-gS~i~~~~ 192 (224)
T 1vhc_A 140 ----EASGGVKMIKALLGPYAQLQIMPTGGI-GLHNIRDYLAIP-NIVACG-GSWFVEKK 192 (224)
T ss_dssp ----TTTTHHHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHTST-TBCCEE-ECGGGCHH
T ss_pred ----ccccCHHHHHHHHhhCCCCeEEEECCc-CHHHHHHHHhcC-CCEEEE-EchhcCcc
Confidence 111136788888776668999999999 679999999985 599999 87776544
No 234
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.61 E-value=0.0022 Score=63.83 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=50.1
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
+.++++++.+...++||+..|||+|++++.++.+ | +|+|+||.++..||..+.++-+
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-g--AD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-I--ADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-T--SSEEEECTHHHHCHHHHHHTTC
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-C--CCEEEECCceecCHHHHHHHHH
Confidence 6788888766433899999999999999999886 7 9999999999999999998854
No 235
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=96.60 E-value=0.015 Score=59.21 Aligned_cols=165 Identities=13% Similarity=0.083 Sum_probs=92.6
Q ss_pred ccceeeecccCchHH-HHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCC-EEEEE
Q psy9514 368 ANLFGVQLCGNNPYV-LTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLP-ITVKT 445 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~-~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~P-vtVKi 445 (611)
+.|+..|+.+.+|-. +....+.++ ..||.|| +|..- --.....+...|+++.--+.++++.|+.+-... +|+=
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk-~~Gf~Gv-~N~pt--vglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~- 168 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELK-EIGFAGV-QNFPT--VGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTP- 168 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHH-HHTCCEE-EECSC--GGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECC-
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHH-HhCCceE-EECCC--cccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEE-
Confidence 678889988887742 222223333 3599999 99631 112223355566666555556666665543211 1111
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.-.+. +-++++.++|+|.|.+|-...... ++....
T Consensus 169 ---~v~~~----eeA~amA~agpDiI~~h~glT~gg---------------lIG~~~----------------------- 203 (286)
T 2p10_A 169 ---YVFSP----EDAVAMAKAGADILVCHMGLTTGG---------------AIGARS----------------------- 203 (286)
T ss_dssp ---EECSH----HHHHHHHHHTCSEEEEECSCC-----------------------------------------------
T ss_pred ---ecCCH----HHHHHHHHcCCCEEEECCCCCCCC---------------cccCCC-----------------------
Confidence 11222 446677899999999997632111 000000
Q ss_pred cccccccCCcc-HHHHH---HHHh-hCCCCcEEEec-CCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 526 TREQRYTKQAD-WDYIE---KCAQ-LCSPAPLYGNG-DILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 526 tr~g~~~~~a~-~~~i~---~~~k-~~~~iPVIgnG-gI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
.....+ -+++. +.++ ...++.|+.-| +|.+++|++.+++..+++||+..|.++..=|
T Consensus 204 -----avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 204 -----GKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred -----cccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 000001 11222 2222 23567777555 9999999999999842399999999988877
No 236
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=96.59 E-value=0.011 Score=62.48 Aligned_cols=121 Identities=10% Similarity=0.045 Sum_probs=87.6
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a 456 (611)
.+++.+.+.|+.+. ..||+.|.|+.+ |+...+++++|++++ ++++.+...-+++ .++
T Consensus 147 ~~~~~~~~~a~~~~-~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~~--~~~- 204 (375)
T 1r0m_A 147 ADEQATVDLVRRHV-EQGYRRIKLKIK------------------PGWDVQPVRATREAFPDIRLTVDANSAYT--LAD- 204 (375)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCCC--GGG-
T ss_pred CCHHHHHHHHHHHH-HhcccEEEEecC------------------hHHHHHHHHHHHHHcCCCeEEEeCCCCCC--HHH-
Confidence 47888877777764 359999999853 133356678888877 4566665444443 355
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+.+|. |. ..+.+
T Consensus 205 ~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d 227 (375)
T 1r0m_A 205 AGRLRQLDEYDLTYIE-------QP--------------------------------------------------LAWDD 227 (375)
T ss_dssp HHHHHTTGGGCCSCEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHHhCCCcEEE-------CC--------------------------------------------------CCccc
Confidence 7888888888887763 21 12345
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
|+.++++.+. .++||.+.+.+++++++.++++.+ .+|.|++
T Consensus 228 ~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~i 268 (375)
T 1r0m_A 228 LVDHAELARR-IRTPLCLDESVASASDARKALALG-AGGVINL 268 (375)
T ss_dssp SHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHHT-SCSEEEE
T ss_pred HHHHHHHHHh-CCCCEEecCccCCHHHHHHHHHhC-CCCEEEE
Confidence 6666666655 489999999999999999999988 7999998
No 237
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.56 E-value=0.012 Score=60.38 Aligned_cols=153 Identities=16% Similarity=0.133 Sum_probs=92.5
Q ss_pred CCeEEEEecCCChhhHHHHHHHHhhhccce-eeeccCCCCcchhhcc-CCCc----cccc----c-ccceeeecccC-ch
Q psy9514 313 EDLFGVQLCGNNPYVLTKCTQLLEEQMAVD-FVDVNLGCPIEFIYKQ-GSGS----GLLQ----R-ANLFGVQLCGN-NP 380 (611)
Q Consensus 313 e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~-~idln~gcp~~~~~~~-~~~~----~l~~----~-~~~~ivQi~g~-~p 380 (611)
+.++++||.|..++.+..+++.+.+. ++| +|++|++||....-+. +... +++. . +.|+++.+..+ +.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~-g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~ 171 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQES-DFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL 171 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHS-CCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhc-CCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 57899999999999999999988774 578 9999999998521000 0011 1111 1 46788887765 66
Q ss_pred HHHHHHHHHHHHhcccceEEeccCCC----ccc-----eec--cccccccc-cChHHHHHHHHHHHhhc--CCCEEEEEE
Q psy9514 381 YVLTKCTQLLEEQMVVDFVDVNLGCP----IEF-----IYK--QGSGSGLL-QRANILQSVITCMNEVS--SLPITVKTR 446 (611)
Q Consensus 381 ~~~~~aA~~l~~~~g~D~IELN~gCP----~~~-----v~~--~g~GsaLl-~r~~~l~eIv~av~~~~--~~PvtVKiR 446 (611)
+.+.+.|+.+. .+|+|+|.++..-+ .+. ... .++|+.-. .......++++.+++.+ ++||.+-
T Consensus 172 ~~~~~~a~~~~-~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~-- 248 (311)
T 1jub_A 172 VHFDIMAEILN-QFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT-- 248 (311)
T ss_dssp HHHHHHHHHHT-TSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE--
T ss_pred HHHHHHHHHHH-HcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE--
Confidence 67777777775 56999998864321 000 000 11221100 01123457888888888 6777653
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
|.-. ......+.+ .+|+++|.+-
T Consensus 249 -GGI~---~~~da~~~l-~~GAd~V~vg 271 (311)
T 1jub_A 249 -GGIE---TGQDAFEHL-LCGATMLQIG 271 (311)
T ss_dssp -SSCC---SHHHHHHHH-HHTCSEEEEC
T ss_pred -CCCC---CHHHHHHHH-HcCCCEEEEc
Confidence 2111 223344444 5799998764
No 238
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=96.55 E-value=0.013 Score=61.80 Aligned_cols=122 Identities=7% Similarity=-0.009 Sum_probs=87.5
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a 456 (611)
.+++.+.+.|+.+. ..||+.|.|+.+ |+...+++++|++++ ++++.+-..-+++ .++
T Consensus 140 ~~~~~~~~~a~~~~-~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~~--~~~- 197 (369)
T 2zc8_A 140 PSVEDTLRVVERHL-EEGYRRIKLKIK------------------PGWDYEVLKAVREAFPEATLTADANSAYS--LAN- 197 (369)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCCC--GGG-
T ss_pred CCHHHHHHHHHHHH-HhhhheeeeecC------------------hhHHHHHHHHHHHHcCCCeEEEecCCCCC--HHH-
Confidence 47888877777664 359999999853 233356678888876 4566665544443 355
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
.++++.|++.|+.+|. |. ..+.+
T Consensus 198 ~~~~~~l~~~~i~~iE-------qP--------------------------------------------------~~~~d 220 (369)
T 2zc8_A 198 LAQLKRLDELRLDYIE-------QP--------------------------------------------------LAYDD 220 (369)
T ss_dssp HHHHHGGGGGCCSCEE-------CC--------------------------------------------------SCTTC
T ss_pred HHHHHHHHhCCCcEEE-------CC--------------------------------------------------CCccc
Confidence 7888888888887654 11 12345
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
++.++++.+. .++||.+.+.+++++++.++++.+ .+|.|++=
T Consensus 221 ~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-~~d~v~ik 262 (369)
T 2zc8_A 221 LLDHAKLQRE-LSTPICLDESLTGAEKARKAIELG-AGRVFNVK 262 (369)
T ss_dssp SHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHHT-CCSEEEEC
T ss_pred HHHHHHHHhh-CCCCEEEcCccCCHHHHHHHHHhC-CCCEEEEc
Confidence 6666666555 489999999999999999999988 79999983
No 239
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.53 E-value=0.0062 Score=64.99 Aligned_cols=100 Identities=15% Similarity=0.303 Sum_probs=67.9
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+.+..+++++.++|+.++.-.+ . ++ ..+.+..+.+.|++.+.+|+....+.+.
T Consensus 141 ~~~~~~~i~~~~~~g~~v~~~v~-~--~~-----------------------~~e~a~~~~~agad~i~i~~~~~~~~~~ 194 (393)
T 2qr6_A 141 TELLSERIAQVRDSGEIVAVRVS-P--QN-----------------------VREIAPIVIKAGADLLVIQGTLISAEHV 194 (393)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEC-T--TT-----------------------HHHHHHHHHHTTCSEEEEECSSCCSSCC
T ss_pred HHHHHHHHHHHhhcCCeEEEEeC-C--cc-----------------------HHHHHHHHHHCCCCEEEEeCCccccccC
Confidence 35566788888888876554221 1 01 1123445567899999998765322233
Q ss_pred CC-ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 533 KQ-ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 533 ~~-a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
.+ ..|..+.++.+. .++|||. |+|.|++++..+++.| ||+|+||+|
T Consensus 195 ~~~~~~~~i~~l~~~-~~~pvi~-ggi~t~e~a~~~~~~G--ad~i~vg~G 241 (393)
T 2qr6_A 195 NTGGEALNLKEFIGS-LDVPVIA-GGVNDYTTALHMMRTG--AVGIIVGGG 241 (393)
T ss_dssp CC-----CHHHHHHH-CSSCEEE-ECCCSHHHHHHHHTTT--CSEEEESCC
T ss_pred CCcccHHHHHHHHHh-cCCCEEE-CCcCCHHHHHHHHHcC--CCEEEECCC
Confidence 33 277778887776 4899998 8999999999999987 999999873
No 240
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=96.52 E-value=0.00055 Score=58.15 Aligned_cols=58 Identities=19% Similarity=0.422 Sum_probs=45.1
Q ss_pred CcccCCcccccCCCCCCCCCCC-CCCCcCChhHHhhcCCCCCCCCCcceeccccCCCCCccccCccc
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGE-KCKFVHDKNVFMKSKPEDISEQCYVFLQHGYCPMGIACRFGSSH 137 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~-~C~f~Hd~~~yl~~k~~d~~~~C~~~~~~G~C~~G~~Crf~~~h 137 (611)
.....|+.|.++ .|..|| .|+|+|+.....-. ..--..|..| ..|.|..+ .|+|...+
T Consensus 15 ~~~~VCrdFlrG----~C~r~d~~CrfsH~~~~~~v~--~~~~~vC~df-lkG~C~r~-~Cky~H~~ 73 (89)
T 2rpp_A 15 LTLEVCRQFQRG----TCSRSDEECKFAHPPKSCQVE--NGRVIACFDS-LKGRCSRE-NCKYLHPP 73 (89)
T ss_dssp SEECBCHHHHHT----CCCCCTTTSSSBCCCSSSCCB--TTBEEBCHHH-HHTCCCCT-TCCSBCCC
T ss_pred chhhhchHHhcC----CCCCCCCCCCCcCCCcccccc--CCceeeehhh-hhCcCCCC-CcceecCH
Confidence 457899999996 599998 99999987642111 1224699999 57999999 99999654
No 241
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.50 E-value=0.0075 Score=67.41 Aligned_cols=91 Identities=19% Similarity=0.173 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
+..++++++.+.|++.|++..=... +.+.....
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~-----------------------------------------------~~~~~~~~ 313 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSF-----------------------------------------------RDCPLKDT 313 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC--------------------------------------------------CCCGGGC
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCcc-----------------------------------------------ccccCCCc
Confidence 5678999999999999887542211 00001223
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCH-----------HHHHHHHHcCCCccEEEEcHHhhh-------------CCchH
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSY-----------EDYTESLKKSPSISGVMIGRGALI-------------KPWIF 590 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~-----------eda~~~l~~G~~aD~VmIGRgaL~-------------dP~lf 590 (611)
.+.+.++++++. ..+||+..|||.+. +++.++++.| ||.|.||.+++. +|.++
T Consensus 314 ~~~~~i~~i~~~-~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG--ad~V~igt~~~~~~~~~~~~~~~~~~~~~i 390 (555)
T 1jvn_A 314 PMLEVLKQAAKT-VFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG--ADKVSIGTDAVYAAEKYYELGNRGDGTSPI 390 (555)
T ss_dssp HHHHHHHHHTTT-CCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT--CSEEEECHHHHHHHHHHHHTTSCCCSCSHH
T ss_pred hHHHHHHHHHhh-CCCcEEEeCccccchhcccccchHHHHHHHHHHcC--CCEEEECCHHhhCchhhccccccccCHHHH
Confidence 346777777655 58999999999999 5599999998 999999999988 48999
Q ss_pred HHHHc
Q psy9514 591 QEIKE 595 (611)
Q Consensus 591 ~ei~~ 595 (611)
+++.+
T Consensus 391 ~~~~~ 395 (555)
T 1jvn_A 391 ETISK 395 (555)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99976
No 242
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=96.47 E-value=0.023 Score=60.84 Aligned_cols=138 Identities=7% Similarity=-0.059 Sum_probs=97.7
Q ss_pred cceeeecc-cCc--hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEE
Q psy9514 369 NLFGVQLC-GNN--PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITV 443 (611)
Q Consensus 369 ~~~ivQi~-g~~--p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtV 443 (611)
.++...+. ..+ ++.+.+.++.+.+ .||..|.|+.+ | ..-.+.|++|++++| +++.|
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~-~G~~~iKlKv~-~-----------------~~d~~~v~avR~a~G~~~~L~v 210 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQ-EGYRRIKIKIK-P-----------------GWDVEPLQETRRAVGDHFPLWT 210 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHH-HTCSCEEEECB-T-----------------TBSHHHHHHHHHHHCTTSCEEE
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHH-cCCCEEEEEeC-c-----------------chHHHHHHHHHHhcCCCCEEEE
Confidence 44444544 235 8888777776543 49999999863 2 112567889998884 67777
Q ss_pred EEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEec
Q psy9514 444 KTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLH 523 (611)
Q Consensus 444 KiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itih 523 (611)
...-+++. +. .+++++|++.|+.+|. |-
T Consensus 211 DaN~~w~~--~~-~~~~~~l~~~~i~~iE-------qP------------------------------------------ 238 (400)
T 3mwc_A 211 DANSSFEL--DQ-WETFKAMDAAKCLFHE-------QP------------------------------------------ 238 (400)
T ss_dssp ECTTCCCG--GG-HHHHHHHGGGCCSCEE-------SC------------------------------------------
T ss_pred eCCCCCCH--HH-HHHHHHHHhcCCCEEe-------CC------------------------------------------
Confidence 76556643 44 6889999998887763 21
Q ss_pred cccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 524 GRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 524 grtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
..+.+++.++++.+. .++||.+...+.+++++.++++.+ .+|.|++--+-+-..
T Consensus 239 --------~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~~~~~-~~d~v~~k~~~~GGi 292 (400)
T 3mwc_A 239 --------LHYEALLDLKELGER-IETPICLDESLISSRVAEFVAKLG-ISNIWNIKIQRVGGL 292 (400)
T ss_dssp --------SCTTCHHHHHHHHHH-SSSCEEESTTCCSHHHHHHHHHTT-CCSEEEECHHHHTSH
T ss_pred --------CChhhHHHHHHHHhh-CCCCEEEeCCcCCHHHHHHHHhcC-CCCEEEEcchhhCCH
Confidence 223466777777665 489999999999999999999988 799999865555444
No 243
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=96.46 E-value=0.026 Score=60.70 Aligned_cols=152 Identities=9% Similarity=0.000 Sum_probs=103.9
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCcccee-----ccccccccc---cChHHHHHHHHHHHhhcCC
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIY-----KQGSGSGLL---QRANILQSVITCMNEVSSL 439 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~-----~~g~GsaLl---~r~~~l~eIv~av~~~~~~ 439 (611)
..++.....+.+++++.+.++.+.+ .||..+-+..|.+..... ..+..+... +.++...+.++++++++|.
T Consensus 142 ~v~~y~~~~~~~~~~~~~~a~~~~~-~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~ 220 (421)
T 4hnl_A 142 AIPAYTHAVADNLDDLYHEIDRFLA-AGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN 220 (421)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHH-TTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccceecccCCCCHHHHHHHHHHHHH-hhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence 3556666777888888887777653 499999999887421111 111111222 2356677888899999876
Q ss_pred CEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCce
Q psy9514 440 PITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASL 519 (611)
Q Consensus 440 PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 519 (611)
.+.+.+-....-+.+.+.++++.|++.++.+|- +
T Consensus 221 ~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------e--------------------------------------- 254 (421)
T 4hnl_A 221 QFQMLHDVHERLHPNQAIQFAKAAEPYQLFFLE-------D--------------------------------------- 254 (421)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C---------------------------------------
T ss_pred CceEeccccccCCHHHHHHHHHHhhhhhhcccc-------c---------------------------------------
Confidence 665555443333557899999999999887652 1
Q ss_pred EEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 520 ITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 520 itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
...+.+++.++++.+. .++||.+.-.++++.++.++++.+ .+|.|++
T Consensus 255 -----------P~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~~ 301 (421)
T 4hnl_A 255 -----------ILPPDQSHWLTQLRSQ-SATPIATGELFNNPMEWQELVKNR-QIDFMRA 301 (421)
T ss_dssp -----------CSCGGGGGGHHHHHTT-CCCCEEECTTCCSGGGTHHHHHTT-CCSEECC
T ss_pred -----------CCcccchHHHHHHHhc-CCCCeecCcceehhHHHHHHHhcC-CceEEEe
Confidence 1222345556666554 589999999999999999999987 7999886
No 244
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.43 E-value=0.035 Score=55.27 Aligned_cols=120 Identities=12% Similarity=0.030 Sum_probs=75.0
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc---CCCEEEEEEccccCCchHHHHHHHHHHHcCCCE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS---SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~---~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
.|+|.||+.. + +|. +.+ .+.+-+.++++.+ +.|+-|-+=++.- +.+.....++...++|+|+
T Consensus 100 ~GAdEID~vi--------n--ig~-~~~---~v~~ei~~v~~a~~~~g~~lKvIlEt~~L-~~e~i~~a~ria~eaGADf 164 (234)
T 1n7k_A 100 AGATELDVVP--------H--LSL-GPE---AVYREVSGIVKLAKSYGAVVKVILEAPLW-DDKTLSLLVDSSRRAGADI 164 (234)
T ss_dssp HTCCEEEECC--------C--GGG-CHH---HHHHHHHHHHHHHHHTTCEEEEECCGGGS-CHHHHHHHHHHHHHTTCSE
T ss_pred cCCCEEEEec--------c--chH-HHH---HHHHHHHHHHHHHhhcCCeEEEEEeccCC-CHHHHHHHHHHHHHhCCCE
Confidence 3999999852 1 222 222 4555556666655 3555333333332 2355666777788999998
Q ss_pred EEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc--CCccHHHHHH--HHhh
Q psy9514 471 ITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT--KQADWDYIEK--CAQL 546 (611)
Q Consensus 471 ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~--~~a~~~~i~~--~~k~ 546 (611)
|-.+-+ |. +.+..+.+.- ..+.
T Consensus 165 VKTsTG------------------------------------------------------~~~~~gAt~~dv~l~~m~~~ 190 (234)
T 1n7k_A 165 VKTSTG------------------------------------------------------VYTKGGDPVTVFRLASLAKP 190 (234)
T ss_dssp EESCCS------------------------------------------------------SSCCCCSHHHHHHHHHHHGG
T ss_pred EEeCCC------------------------------------------------------CCCCCCCCHHHHHHHHHHHH
Confidence 765321 11 2333333333 3333
Q ss_pred CCCCcEEEecCCCCHHHHHHHHHcCCCcc--EEEEcHHhhh
Q psy9514 547 CSPAPLYGNGDILSYEDYTESLKKSPSIS--GVMIGRGALI 585 (611)
Q Consensus 547 ~~~iPVIgnGgI~s~eda~~~l~~G~~aD--~VmIGRgaL~ 585 (611)
.. +||-+.|||.+.+++.++++.| ++ |+..||.++.
T Consensus 191 v~-v~VKaaGGirt~~~al~~i~aG--a~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 191 LG-MGVKASGGIRSGIDAVLAVGAG--ADIIGTSSAVKVLE 228 (234)
T ss_dssp GT-CEEEEESSCCSHHHHHHHHHTT--CSEEEETTHHHHHH
T ss_pred HC-CCEEEecCCCCHHHHHHHHHcC--ccccchHHHHHHHH
Confidence 33 9999999999999999999987 99 8888876653
No 245
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.36 E-value=0.016 Score=56.93 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=36.9
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 549 PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
++||+.-|+|++++++..+...| +|+|.||.+++.-+++...++
T Consensus 170 ~~~ii~ggGI~~~~~~~~~~~~g--aDgvlVGsAi~~~~d~~~~~~ 213 (219)
T 2h6r_A 170 DVKVLCGAGISKGEDVKAALDLG--AEGVLLASGVVKAKNVEEAIR 213 (219)
T ss_dssp TCEEEECSSCCSHHHHHHHHTTT--CCCEEESHHHHTCSSHHHHHH
T ss_pred CCeEEEEeCcCcHHHHHHHhhCC--CCEEEEcHHHhCcccHHHHHH
Confidence 79999999999999999988876 999999988777666544443
No 246
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.35 E-value=0.032 Score=54.33 Aligned_cols=180 Identities=14% Similarity=0.062 Sum_probs=103.0
Q ss_pred eeecccC-chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 372 GVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 372 ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
.+.|||- +++++..+++. |+|.|=+.+--+++.. =.++.+.+|++.+.. ....|-+- .+
T Consensus 3 ~vKICGit~~eda~~a~~~-----GaD~iGfif~~~SpR~----------V~~~~a~~i~~~~~~---~~~~VgVf--vn 62 (205)
T 1nsj_A 3 RVKICGITNLEDALFSVES-----GADAVGFVFYPKSKRY----------ISPEDARRISVELPP---FVFRVGVF--VN 62 (205)
T ss_dssp EEEECCCCSHHHHHHHHHH-----TCSEEEEECCTTCTTB----------CCHHHHHHHHHHSCS---SSEEEEEE--SS
T ss_pred cEEECCCCcHHHHHHHHHc-----CCCEEEEEecCCCCCc----------CCHHHHHHHHHhCCC---CCCEEEEE--eC
Confidence 4678887 56666666543 8888887753222111 135566666655432 12222221 22
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHh---hhcccCchhhhhcchhhHhcCCceEEeccccc
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCA---QLCSRDNNIIHNFMPKFRDWGASLITLHGRTR 527 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~---~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr 527 (611)
. ....+...+...+.++|.+||.. +.+++..+. ..++............+....++++.+.....
T Consensus 63 ~---~~~~i~~~~~~~~ld~vQLHG~e---------~~~~~~~l~~~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~ 130 (205)
T 1nsj_A 63 E---EPEKILDVASYVQLNAVQLHGEE---------PIELCRKIAERILVIKAVGVSNERDMERALNYREFPILLDTKTP 130 (205)
T ss_dssp C---CHHHHHHHHHHHTCSEEEECSCC---------CHHHHHHHHTTSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCS
T ss_pred C---CHHHHHHHHHhhCCCEEEECCCC---------CHHHHHHHhcCCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCC
Confidence 2 24466777788899999999853 223444442 12222211111111223333478887765543
Q ss_pred -cccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 528 -EQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 528 -~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
.|+.....||..+.... ..+.|+|..||+ +++.+.+++..- ++++|=+..|.=..|
T Consensus 131 ~~GGtG~~fdw~~l~~~~--~~~~p~~LAGGL-~peNV~~ai~~~-~p~gVDvsSGvE~~p 187 (205)
T 1nsj_A 131 EYGGSGKTFDWSLILPYR--DRFRYLVLSGGL-NPENVRSAIDVV-RPFAVDVSSGVEAFP 187 (205)
T ss_dssp SSSSCCSCCCGGGTGGGG--GGSSCEEEESSC-CTTTHHHHHHHH-CCSEEEESGGGEEET
T ss_pred CCCCCCCccCHHHHHhhh--cCCCcEEEECCC-CHHHHHHHHHhc-CCCEEEECCceecCC
Confidence 23344556898765421 236799999999 688888887753 489999998876534
No 247
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.26 E-value=0.089 Score=54.60 Aligned_cols=151 Identities=17% Similarity=0.138 Sum_probs=89.0
Q ss_pred CCeEEEEecCCC-------hhhHHHHHHHHhhhccceeeeccCCCCcch--hhccCC--Cccccc--------------c
Q psy9514 313 EDLFGVQLCGNN-------PYVLTKCTQLLEEQMAVDFVDVNLGCPIEF--IYKQGS--GSGLLQ--------------R 367 (611)
Q Consensus 313 e~~~~vQi~g~~-------p~~~~~~a~~l~~~~~v~~idln~gcp~~~--~~~~~~--~~~l~~--------------~ 367 (611)
+.++++||.++. ++.+..+++.+.+ ++|+|++|++||... .+.+.. .++++. .
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~--g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~ 210 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYA--YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHK 210 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG--GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhc--cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccc
Confidence 468999999887 7778888877764 689999999999732 111100 001111 1
Q ss_pred ccceeeecccC-chHHHHHHHHHHHHhcccceEEeccCCC-ccce----eccccccccccC--hHHHHHHHHHHHhhc--
Q psy9514 368 ANLFGVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGCP-IEFI----YKQGSGSGLLQR--ANILQSVITCMNEVS-- 437 (611)
Q Consensus 368 ~~~~ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gCP-~~~v----~~~g~GsaLl~r--~~~l~eIv~av~~~~-- 437 (611)
+.++++.+... +.+++.+.|+.+. ..|+|+|.+..+-. .... ...++|+. -.. .....++++.+++.+
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~-~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~-~g~~~~~~~~~~i~~i~~~~~~ 288 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLV-RHNIDGVIATNTTLDRSLVQGMKNCDQTGGL-SGRPLQLKSTEIIRRLSLELNG 288 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHH-HTTCSEEEECCCBCCCTTSTTSTTTTCSSEE-EEGGGHHHHHHHHHHHHHHHTT
T ss_pred cCceEEEecCCCCHHHHHHHHHHHH-HcCCcEEEEeCCcccccccccccccccCCCc-CCchhHHHHHHHHHHHHHHhCC
Confidence 57888888765 5567777777775 46999999864321 0000 00112211 011 123457788888877
Q ss_pred CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 438 SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 438 ~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
++||+.- |. ........+.+. +|+|+|.+-
T Consensus 289 ~ipVi~~---GG---I~~~~da~~~l~-~GAd~V~ig 318 (336)
T 1f76_A 289 RLPIIGV---GG---IDSVIAAREKIA-AGASLVQIY 318 (336)
T ss_dssp SSCEEEE---SS---CCSHHHHHHHHH-HTCSEEEES
T ss_pred CCCEEEE---CC---CCCHHHHHHHHH-CCCCEEEee
Confidence 6887653 21 122234444444 699998763
No 248
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.23 E-value=0.099 Score=50.81 Aligned_cols=175 Identities=12% Similarity=0.072 Sum_probs=101.8
Q ss_pred eeecccC-chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 372 GVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 372 ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
.+.|||- +++++..+++. |+|.|=+.+--+++.. =.++.+.+|++.+.. ....|-+- .+
T Consensus 2 ~vKICGit~~eda~~a~~~-----GaD~iGfif~~~SpR~----------V~~~~a~~i~~~~~~---~~~~VgVf--vn 61 (203)
T 1v5x_A 2 RVKICGITRLEDALLAEAL-----GAFALGFVLAPGSRRR----------IAPEAARAIGEALGP---FVVRVGVF--RD 61 (203)
T ss_dssp EEEECCCCCHHHHHHHHHH-----TCSEEEEECCTTCTTB----------CCHHHHHHHHHHSCS---SSEEEEEE--SS
T ss_pred cEEEcCCCcHHHHHHHHHc-----CCCEEEEEecCCCCCc----------CCHHHHHHHHHhCCC---CCCEEEEE--eC
Confidence 3577777 56666666543 8888887753222111 135566666655432 12222221 22
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHh---hhcccCchhh-hhcchhhHhcCCceEEecccc
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCA---QLCSRDNNII-HNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~---~~~~~~~~~~-~~~~~~l~~~G~~~itihgrt 526 (611)
. ....+...+...+.++|.+||... .+++..+. ..++...... .++ .+....++++.+...+
T Consensus 62 ~---~~~~i~~~~~~~~ld~vQLHG~e~---------~~~~~~l~~~~~vika~~v~~~~~l--~~~~~~~d~~LlD~~~ 127 (203)
T 1v5x_A 62 Q---PPEEVLRLMEEARLQVAQLHGEEP---------PEWAEAVGRFYPVIKAFPLEGPARP--EWADYPAQALLLDGKR 127 (203)
T ss_dssp C---CHHHHHHHHHHTTCSEEEECSCCC---------HHHHHHHTTTSCEEEEEECSSSCCG--GGGGSSCSEEEEECSS
T ss_pred C---CHHHHHHHHHhhCCCEEEECCCCC---------HHHHHHhccCCCEEEEEEcCChHhh--hhhhcCCCEEEEcCCC
Confidence 2 345677778889999999998641 23444441 1122211111 112 2333337888877543
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
++.-...||..+..+.. .+.|+|..||+ +++.+.+++..+ +++|=+..|.=..|
T Consensus 128 --gGtG~~fdW~~l~~~~~--~~~p~~LAGGL-~peNV~~ai~~~--p~gVDvsSGvE~~p 181 (203)
T 1v5x_A 128 --PGSGEAYPRAWAKPLLA--TGRRVILAGGI-APENLEEVLALR--PYALDLASGVEEAP 181 (203)
T ss_dssp --TTSCCCCCGGGGHHHHH--TTSCEEECSSC-CSTTHHHHHHHC--CSEEEESGGGEEET
T ss_pred --CCCCCccCHHHHHhhhc--cCCcEEEECCC-CHHHHHHHHhcC--CCEEEeCCceecCC
Confidence 34445669988776322 36799999999 688887777444 89999998876534
No 249
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=96.18 E-value=0.11 Score=53.45 Aligned_cols=40 Identities=20% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCcEEEecCCC-CHHH----HHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 548 SPAPLYGNGDIL-SYED----YTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 548 ~~iPVIgnGgI~-s~ed----a~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
.++||++.||+. +.++ +.++++.| +++|.+||.++..|+.
T Consensus 222 ~~vPVv~~GG~~~~~~~~l~~v~~ai~aG--A~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 222 CPVPIVIAGGKKLPEREALEMCWQAIDQG--ASGVDMGRNIFQSDHP 266 (295)
T ss_dssp CSSCEEEECCSCCCHHHHHHHHHHHHHTT--CSEEEESHHHHTSSSH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHHHhC--CeEEEeHHHHhcCcCH
Confidence 479999999998 4444 44555776 9999999999976653
No 250
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=96.15 E-value=0.032 Score=57.00 Aligned_cols=151 Identities=14% Similarity=0.125 Sum_probs=82.9
Q ss_pred CCeEEEEecCCChhhHHHHHHHHhhhccceeeeccCCCCcchh----hccCC--Cccccc----c-ccceeeecccCchH
Q psy9514 313 EDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVDVNLGCPIEFI----YKQGS--GSGLLQ----R-ANLFGVQLCGNNPY 381 (611)
Q Consensus 313 e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~idln~gcp~~~~----~~~~~--~~~l~~----~-~~~~ivQi~g~~p~ 381 (611)
+.++++||.+..++.+.++++.+.+..++++|++|++||.... |.... ..+++. . +.++++-+..+- .
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~-~ 176 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNV-T 176 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCS-S
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCh-H
Confidence 7899999999999999999888875457899999999997320 10000 011111 1 456666554321 1
Q ss_pred HHHHHHHHHHHhcccceEEeccC------CCccc--ee---ccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 382 VLTKCTQLLEEQMVVDFVDVNLG------CPIEF--IY---KQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 382 ~~~~aA~~l~~~~g~D~IELN~g------CP~~~--v~---~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
.+.+.++.+. ..|+|+|.+-.+ ++... .. ..|+.+. .......+.++.+++.+++||.+- |.-
T Consensus 177 ~~~~~a~~l~-~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~--~~~~~~~~~i~~i~~~~~ipvia~---GGI 250 (311)
T 1ep3_A 177 DIVPIAKAVE-AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGP--AIKPVALKLIHQVAQDVDIPIIGM---GGV 250 (311)
T ss_dssp CSHHHHHHHH-HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESG--GGHHHHHHHHHHHHTTCSSCEEEC---SSC
T ss_pred HHHHHHHHHH-HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCc--cchHHHHHHHHHHHHhcCCCEEEE---CCc
Confidence 2233333333 359999998221 11000 00 0112111 111234577888888888888663 211
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
.+ ...+.+.+ ++|+++|.+-
T Consensus 251 ~~---~~d~~~~l-~~GAd~V~vg 270 (311)
T 1ep3_A 251 AN---AQDVLEMY-MAGASAVAVG 270 (311)
T ss_dssp CS---HHHHHHHH-HHTCSEEEEC
T ss_pred CC---HHHHHHHH-HcCCCEEEEC
Confidence 12 22333333 4799998763
No 251
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.15 E-value=0.021 Score=58.75 Aligned_cols=154 Identities=18% Similarity=0.103 Sum_probs=92.6
Q ss_pred CCCeEEEEecCCChhhHHHHHHHHhhhccce---eeeccCCCCcchhhccCC-Cc----cccc----c-ccceeeecccC
Q psy9514 312 SEDLFGVQLCGNNPYVLTKCTQLLEEQMAVD---FVDVNLGCPIEFIYKQGS-GS----GLLQ----R-ANLFGVQLCGN 378 (611)
Q Consensus 312 ~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~---~idln~gcp~~~~~~~~~-~~----~l~~----~-~~~~ivQi~g~ 378 (611)
.+.++++||.|..++.+..+++.+.+. ++| +|++|++||....-+.-. .. +++. . +.|+++-+..+
T Consensus 92 ~~~p~~~~i~g~~~~~~~~~a~~~~~~-g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 92 SKKPLFLSISGLSVEENVAMVRRLAPV-AQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHH-HHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHh-CCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 357899999999999999999988775 578 999999999852100000 11 1111 1 56788887765
Q ss_pred -chHHHHHHHHHHHHhcc-cceEEeccCCC----ccc-----ee--ccccccccc-cChHHHHHHHHHHHhhc-CCCEEE
Q psy9514 379 -NPYVLTKCTQLLEEQMV-VDFVDVNLGCP----IEF-----IY--KQGSGSGLL-QRANILQSVITCMNEVS-SLPITV 443 (611)
Q Consensus 379 -~p~~~~~aA~~l~~~~g-~D~IELN~gCP----~~~-----v~--~~g~GsaLl-~r~~~l~eIv~av~~~~-~~PvtV 443 (611)
+.+.+.++|+.+. .+| +|+|.++..-. .+. .. ...+|+.-. .......++++.+++.+ ++||..
T Consensus 171 ~~~~~~~~~a~~~~-~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~ 249 (314)
T 2e6f_A 171 FDIAHFDTAAAVLN-EFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFG 249 (314)
T ss_dssp CCHHHHHHHHHHHH-TCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHH-hcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEE
Confidence 6677777777775 569 99998764321 000 00 011121100 01123457888888888 778765
Q ss_pred EEEccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 444 KTRTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 444 KiR~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
- |.- .......+.+ .+|+++|.+-
T Consensus 250 ~---GGI---~~~~da~~~l-~~GAd~V~ig 273 (314)
T 2e6f_A 250 C---GGV---YSGEDAFLHI-LAGASMVQVG 273 (314)
T ss_dssp E---SSC---CSHHHHHHHH-HHTCSSEEEC
T ss_pred E---CCC---CCHHHHHHHH-HcCCCEEEEc
Confidence 3 211 1223344444 5799998763
No 252
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=96.09 E-value=0.094 Score=56.87 Aligned_cols=127 Identities=9% Similarity=0.004 Sum_probs=91.3
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCch
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNN 454 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~ 454 (611)
+.+++.+.+.|+.+.+ .||..|-|+.|+ +++.-.+.+++|++++|. ++.|-.--++ +..
T Consensus 199 ~~~~e~~~~~a~~~~~-~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~--~~~ 259 (441)
T 4a35_A 199 GYSDDTLKQLCAQALK-DGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRW--DVP 259 (441)
T ss_dssp TCCHHHHHHHHHHHHH-TTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCC--CHH
T ss_pred CCCHHHHHHHHHHHHH-CCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCC--CHH
Confidence 4588888888777653 499999998765 244556778999998864 4555433344 346
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++.+++++|++.++.+|- |- ..+
T Consensus 260 ~A~~~~~~L~~~~~~~iE-------eP--------------------------------------------------~~~ 282 (441)
T 4a35_A 260 EAVEWMSKLAKFKPLWIE-------EP--------------------------------------------------TSP 282 (441)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CC--------------------------------------------------SCT
T ss_pred HHHHHHHhhcccCccEEe-------CC--------------------------------------------------CCc
Confidence 789999999998887652 11 223
Q ss_pred ccHHHHHHHHhh--CCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 535 ADWDYIEKCAQL--CSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 535 a~~~~i~~~~k~--~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+++.++++.+. ..++||.+.-.+.++.++.++++.+ .+|.|++-
T Consensus 283 ~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~-a~div~~d 329 (441)
T 4a35_A 283 DDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAK-ALQFLQID 329 (441)
T ss_dssp TCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTT-CCSEECCC
T ss_pred ccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcC-CCCEEEEC
Confidence 355555665553 1479999999999999999999987 79999874
No 253
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.08 E-value=0.027 Score=55.65 Aligned_cols=172 Identities=12% Similarity=0.001 Sum_probs=99.4
Q ss_pred eeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 371 FGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 371 ~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
++.=+.+.+++++...++.+. ..|++.|||-.--| ...+.++.+++... .+.+.. |.-
T Consensus 28 ii~V~r~~~~~~~~~~~~al~-~gGv~~iel~~k~~------------------~~~~~i~~l~~~~~-~~~iga--gtv 85 (225)
T 1mxs_A 28 ILPVITIAREEDILPLADALA-AGGIRTLEVTLRSQ------------------HGLKAIQVLREQRP-ELCVGA--GTV 85 (225)
T ss_dssp EEEEECCSCGGGHHHHHHHHH-HTTCCEEEEESSST------------------HHHHHHHHHHHHCT-TSEEEE--ECC
T ss_pred EEEEEeCCCHHHHHHHHHHHH-HCCCCEEEEecCCc------------------cHHHHHHHHHHhCc-ccEEee--CeE
Confidence 333444566777777777765 35899999853222 12345666666552 344332 221
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-cccC-chhhhhcchhhHhcCCceEEecccccc
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-CSRD-NNIIHNFMPKFRDWGASLITLHGRTRE 528 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-~~~~-~~~~~~~~~~l~~~G~~~itihgrtr~ 528 (611)
- ..+-++.+.++|+++|++-+.. -+.+..+..+ ++.. --.+...+....+.|++.|-++.- .
T Consensus 86 l----~~d~~~~A~~aGAd~v~~p~~d----------~~v~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~vk~FPa--~ 149 (225)
T 1mxs_A 86 L----DRSMFAAVEAAGAQFVVTPGIT----------EDILEAGVDSEIPLLPGISTPSEIMMGYALGYRRFKLFPA--E 149 (225)
T ss_dssp C----SHHHHHHHHHHTCSSEECSSCC----------HHHHHHHHHCSSCEECEECSHHHHHHHHTTTCCEEEETTH--H
T ss_pred e----eHHHHHHHHHCCCCEEEeCCCC----------HHHHHHHHHhCCCEEEeeCCHHHHHHHHHCCCCEEEEccC--c
Confidence 1 1145677788999998743221 1111111111 0000 001112234456789999988541 0
Q ss_pred ccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 529 QRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 529 g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
......+++.+....+++||++.||| +++.+.+++..+ ++++|. |++++..+
T Consensus 150 ----~~~G~~~lk~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~-Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 150 ----ISGGVAAIKAFGGPFGDIRFCPTGGV-NPANVRNYMALP-NVMCVG-TTWMLDSS 201 (225)
T ss_dssp ----HHTHHHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHHST-TBCCEE-ECTTSCHH
T ss_pred ----cccCHHHHHHHHhhCCCCeEEEECCC-CHHHHHHHHhcc-CCEEEE-EchhcCch
Confidence 01125778887766668999999999 689999999943 499999 87776544
No 254
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=96.04 E-value=0.033 Score=59.80 Aligned_cols=124 Identities=11% Similarity=0.086 Sum_probs=85.3
Q ss_pred cccceEEeccCCCccceecccccccc-ccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGL-LQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaL-l~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.||..|-|+ |..... ...|..+ ..+++...+++++|+++++..+.+.+.....-+.+++..+++.|++.|+.+|.
T Consensus 170 ~G~~~~K~~---~~~~~~-~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 245 (410)
T 3dip_A 170 EGYAAMKIW---PFDDFA-SITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVE 245 (410)
T ss_dssp TTCSEEEEC---TTHHHH-TTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEE
T ss_pred cCCCEEEEC---CccCcc-ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 499999986 321111 1122211 12356778899999999975555555554333457889999999999988764
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc-cCCccHHHHHHHHhhCCCCc
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY-TKQADWDYIEKCAQLCSPAP 551 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~-~~~a~~~~i~~~~k~~~~iP 551 (611)
- . ..+.+++.++++.+. .++|
T Consensus 246 q---------------------------------------------------------P~~~~~~~~~~~~l~~~-~~iP 267 (410)
T 3dip_A 246 D---------------------------------------------------------PIAKMDNIPAVADLRRQ-TRAP 267 (410)
T ss_dssp C---------------------------------------------------------CBSCTTCHHHHHHHHHH-HCCC
T ss_pred C---------------------------------------------------------CCCCcccHHHHHHHHhh-CCCC
Confidence 1 1 122355666666555 4899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
|.+.+.+.+++++.++++.+ .+|.|++=
T Consensus 268 Ia~dE~~~~~~~~~~~l~~~-~~d~v~~k 295 (410)
T 3dip_A 268 ICGGENLAGTRRFHEMLCAD-AIDFVMLD 295 (410)
T ss_dssp EEECTTCCSHHHHHHHHHTT-CCSEEEEC
T ss_pred EEecCCcCCHHHHHHHHHcC-CCCeEeec
Confidence 99999999999999999998 79999984
No 255
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.02 E-value=0.0092 Score=65.51 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=37.6
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
..++++.... ++|||+.|||.+..|+.+++..| ||+||+|+.++.
T Consensus 318 ~~~~~~~~~~-~vpVia~GGi~~~~di~kalalG--A~~v~~g~~~~~ 362 (486)
T 2cu0_A 318 AMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAG--ADAVMLGNLLAG 362 (486)
T ss_dssp HHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTT
T ss_pred HHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcC--CCceeeChhhhc
Confidence 3444444443 79999999999999999999987 999999999885
No 256
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=95.93 E-value=0.04 Score=54.19 Aligned_cols=173 Identities=13% Similarity=0.061 Sum_probs=94.0
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~ 457 (611)
+.+.+.+.++.+. ..++.|+++ -+.. . .+| ..+|+.+++.. +.++.+-+.+. +. +.
T Consensus 16 ~~~~a~~~~~~~~--~~~~~ikvg--~~lf--~--~~G----------~~~v~~l~~~~p~~~iflDlKl~--Di-p~-- 72 (221)
T 3exr_A 16 NLKGAITAAVSVG--NEVDVIEAG--TVCL--L--QVG----------SELVEVLRSLFPDKIIVADTKCA--DA-GG-- 72 (221)
T ss_dssp SHHHHHHHHHHHG--GGCSEEEEC--HHHH--H--HHC----------THHHHHHHHHCTTSEEEEEEEEC--SC-HH--
T ss_pred CHHHHHHHHHhhC--CCceEEEEC--HHHH--H--hcC----------HHHHHHHHHhCCCCcEEEEEEee--cc-HH--
Confidence 4566666666653 246777773 3311 0 122 24567777654 55555554443 33 33
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc---hh-h--------hhcchhhHhcCCceEEeccc
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN---NI-I--------HNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~---~~-~--------~~~~~~l~~~G~~~itihgr 525 (611)
.+++.+.++|++++|||+-.... -+..+.+.++... .. . .+.+..+.+.|++.+.+|-
T Consensus 73 t~~~~~~~~Gad~vtVH~~~g~~---------~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~- 142 (221)
T 3exr_A 73 TVAKNNAVRGADWMTCICSATIP---------TMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQ- 142 (221)
T ss_dssp HHHHHHHTTTCSEEEEETTSCHH---------HHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEEC-
T ss_pred HHHHHHHHcCCCEEEEeccCCHH---------HHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHH-
Confidence 23455789999999999854321 1233333332211 00 0 1112234455777766642
Q ss_pred cccccccCC-c---cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 526 TREQRYTKQ-A---DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 526 tr~g~~~~~-a---~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
.......+. + ....+++... .+++|...||| +++++.+++..| +|.+++||++...++.
T Consensus 143 a~~~~~~Gvv~s~~e~~~ir~~~~--~~~~i~v~gGI-~~~~~~~~~~aG--ad~~VvG~~I~~a~dp 205 (221)
T 3exr_A 143 SRDALLAGETWGEKDLNKVKKLIE--MGFRVSVTGGL-SVDTLKLFEGVD--VFTFIAGRGITEAKNP 205 (221)
T ss_dssp CHHHHHHTCCCCHHHHHHHHHHHH--HTCEEEEESSC-CGGGGGGGTTCC--CSEEEECHHHHTSSSH
T ss_pred HHhcCCCccccCHHHHHHHHHhhc--CCceEEEECCC-CHHHHHHHHHCC--CCEEEECchhhCCCCH
Confidence 111111111 1 2333443332 25788999999 688888888887 9999999999875543
No 257
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=95.88 E-value=0.1 Score=55.79 Aligned_cols=128 Identities=9% Similarity=0.050 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHH
Q psy9514 380 PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHN 458 (611)
Q Consensus 380 p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~ 458 (611)
++.+.+.++.+.+..||..|-|..|- ++..-.+.+++|++++ ++++.|-.--++ +..++..
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~~~~~l~vDaN~~w--~~~~A~~ 230 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTT----------------DCAGDVAILRAVREALPGVNLRVDPNAAW--SVPDSVR 230 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTCS--CHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCC----------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCC--CHHHHHH
Confidence 57777776666543489998887651 3455577889999887 334444433333 3477889
Q ss_pred HHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH
Q psy9514 459 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD 538 (611)
Q Consensus 459 la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~ 538 (611)
+++.|++.|+.+|- |- . . +++
T Consensus 231 ~~~~l~~~~i~~iE-------qP-------------------------------------------------~-~--d~~ 251 (398)
T 4dye_A 231 AGIALEELDLEYLE-------DP-------------------------------------------------C-V--GIE 251 (398)
T ss_dssp HHHHHGGGCCSEEE-------CC-------------------------------------------------S-S--HHH
T ss_pred HHHHHhhcCCCEEc-------CC-------------------------------------------------C-C--CHH
Confidence 99999999888763 21 1 1 566
Q ss_pred HHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 539 YIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 539 ~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d 586 (611)
.++++.+. .++||.+...+.++.++.++++.+ .+|.|++--+-+--
T Consensus 252 ~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~v~~k~~~~GG 297 (398)
T 4dye_A 252 GMAQVKAK-VRIPLCTNMCVVRFEDFAPAMRLN-AVDVIHGDVYKWGG 297 (398)
T ss_dssp HHHHHHHH-CCSCEEESSSCCSGGGHHHHHHTT-CCSEEEECHHHHTS
T ss_pred HHHHHHhh-CCCCEEeCCcCCCHHHHHHHHHhC-CCCEEEeCccccCC
Confidence 66776665 489999999999999999999987 79999986544433
No 258
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.87 E-value=0.044 Score=52.62 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=76.4
Q ss_pred HHHHHHHHHhhcCCCEEEEEEc--cccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc-
Q psy9514 426 LQSVITCMNEVSSLPITVKTRT--GIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN- 502 (611)
Q Consensus 426 l~eIv~av~~~~~~PvtVKiR~--g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~- 502 (611)
+.++++.+++. ++|+.|-+-+ |...+ ..+.+++ ...+++.|. +.+...-..-+..+.. .+++..
T Consensus 45 L~~iv~~ik~~-gK~vivh~DlI~GLs~d-~~ai~fL---~~~~pdGII-sTk~~~i~~Akk~GL~-------tIqR~Fl 111 (188)
T 1vkf_A 45 LKFHLKILKDR-GKTVFVDMDFVNGLGEG-EEAILFV---KKAGADGII-TIKPKNYVVAKKNGIP-------AVLRFFA 111 (188)
T ss_dssp HHHHHHHHHHT-TCEEEEEGGGEETCCSS-HHHHHHH---HHHTCSEEE-ESCHHHHHHHHHTTCC-------EEEEEEC
T ss_pred HHHHHHHHHHC-CCeEEEecCcccccCCC-HHHHHHH---HhcCCCEEE-cCcHHHHHHHHHcCCE-------EeeEEEE
Confidence 88999999887 8998887532 34332 5566666 667788763 3332110000000000 000000
Q ss_pred ---hhhhhcchhhHhcCCceEEeccccccccccCCc-cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEE
Q psy9514 503 ---NIIHNFMPKFRDWGASLITLHGRTREQRYTKQA-DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVM 578 (611)
Q Consensus 503 ---~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a-~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~Vm 578 (611)
......+..+.....+.+-+ .+.. --..++++ .++|||+.|.|.|.||+.+ +++| ||+|+
T Consensus 112 iDs~al~~~~~~I~~~kPD~iEi---------LPg~v~p~~I~~v----~~~PiIaGGlI~t~edv~~-l~aG--A~aIs 175 (188)
T 1vkf_A 112 LDSKAVERGIEQIETLGVDVVEV---------LPGAVAPKVARKI----PGRTVIAAGLVETEEEARE-ILKH--VSAIS 175 (188)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEE---------ESGGGHHHHHTTS----TTSEEEEESCCCSHHHHHH-HTTT--SSEEE
T ss_pred EEeHHHhhhhhhccccCCCeEee---------cCCCchHHHHHHh----cCCCEEEECCcCCHHHHHH-HHCC--CeEEE
Confidence 00112233344444555433 1211 22334333 5889999999999999999 9998 99999
Q ss_pred EcHHhhhCCc
Q psy9514 579 IGRGALIKPW 588 (611)
Q Consensus 579 IGRgaL~dP~ 588 (611)
.+.--|++..
T Consensus 176 Ts~~~LW~~~ 185 (188)
T 1vkf_A 176 TSSRILWKMK 185 (188)
T ss_dssp ECCHHHHTC-
T ss_pred eCCHHHhCCc
Confidence 9998888653
No 259
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.86 E-value=0.066 Score=55.25 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=34.6
Q ss_pred cHHHHHHHHhh---CCCCc-EEEecCCCCHH----HHHHHHHcCCCccEEEEcHHhhhC
Q psy9514 536 DWDYIEKCAQL---CSPAP-LYGNGDILSYE----DYTESLKKSPSISGVMIGRGALIK 586 (611)
Q Consensus 536 ~~~~i~~~~k~---~~~iP-VIgnGgI~s~e----da~~~l~~G~~aD~VmIGRgaL~d 586 (611)
+++.+.++++. ...+| |+..||+ +.+ .+..++..| +++|++||++...
T Consensus 205 ~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aG--a~Gv~vGRaI~q~ 260 (304)
T 1to3_A 205 ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAG--ASGFLAGRAVWSS 260 (304)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTT--CCEEEESHHHHGG
T ss_pred CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcC--CeEEEEehHHhCc
Confidence 34444444443 24789 9999999 563 466777776 9999999999977
No 260
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=95.83 E-value=0.12 Score=52.19 Aligned_cols=115 Identities=16% Similarity=0.098 Sum_probs=74.8
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEc--cccCCchHHHHHHHHHHHcCCCE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRT--GIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~--g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
.|+|.||+-+ + +|..+..+.+.+.+-+++|+++++ .+..+|+-+ +.-.+.+.....++...++|+|+
T Consensus 97 ~GAdEIDmVi--------n--ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADf 166 (260)
T 1p1x_A 97 YGADEVDVVF--------P--YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADF 166 (260)
T ss_dssp HTCSEEEEEC--------C--HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSE
T ss_pred cCCCEEEEec--------c--HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCE
Confidence 3999999842 1 344455677888888888888774 234555443 33223232457777888999999
Q ss_pred EEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH---HHHHHHhh-
Q psy9514 471 ITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD---YIEKCAQL- 546 (611)
Q Consensus 471 ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~---~i~~~~k~- 546 (611)
|-.+-+. ..+.+..+ .+++.++.
T Consensus 167 VKTSTGf-----------------------------------------------------~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 167 IKTSTGK-----------------------------------------------------VAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp EECCCSC-----------------------------------------------------SSCCCCHHHHHHHHHHHHHH
T ss_pred EEeCCCC-----------------------------------------------------CCCCCCHHHHHHHHHHHHHh
Confidence 8654321 11223333 33444331
Q ss_pred --CCCCcEEEecCCCCHHHHHHHHHcC
Q psy9514 547 --CSPAPLYGNGDILSYEDYTESLKKS 571 (611)
Q Consensus 547 --~~~iPVIgnGgI~s~eda~~~l~~G 571 (611)
..+++|-+.|||.|++++.++++.|
T Consensus 194 ~~g~~v~VKaaGGIrt~~~al~~i~ag 220 (260)
T 1p1x_A 194 GVEKTVGFKPAGGVRTAEDAQKYLAIA 220 (260)
T ss_dssp TCTTTCEEECBSSCCSHHHHHHHHHHH
T ss_pred cCCCCceEEEeCCCCCHHHHHHHHHhh
Confidence 3479999999999999999999986
No 261
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=95.80 E-value=0.0054 Score=60.16 Aligned_cols=62 Identities=23% Similarity=0.421 Sum_probs=45.0
Q ss_pred CcccCCcccccCCCCCCCCC----CCCCCCcCChh-----------------------HHhhcCCCCCCCCCcceec---
Q psy9514 72 PEDCYCPFLKDSTLEQTCKY----GEKCKFVHDKN-----------------------VFMKSKPEDISEQCYVFLQ--- 121 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~----g~~C~f~Hd~~-----------------------~yl~~k~~d~~~~C~~~~~--- 121 (611)
+...||..++.+ .|.| +..|||||||. -.|+.-|--++..|..|..
T Consensus 87 ~~LHLCK~~l~G----~C~~~~~~~~~Ck~SHdi~s~~N~~vLk~h~l~~L~~~eL~~LLLQnDp~lLPeiC~~YkG~g~ 162 (229)
T 3u9g_A 87 DSLHLCKLNLLG----RCHYAQSQRNLCKYSHDVLSEQNFQILKNHELSGLNQEELACLLVQSDPFFLPEICKSYKGEGR 162 (229)
T ss_dssp CSBCCCHHHHTT----CCGGGTCCSSCCSSCSCTTCHHHHHHHHHTTCTTCCHHHHHHHHHTTCGGGSCCBCTTCCCSSS
T ss_pred cceeechhhhcC----cCCcccCCCCCcccccccCchhHHHHHHHcCcccCCHhHhhheeccCCCccCchHHHHhCCCCC
Confidence 568899999986 5943 35699999983 2233334446899999932
Q ss_pred cccCCCCCccccCccccC
Q psy9514 122 HGYCPMGIACRFGSSHLD 139 (611)
Q Consensus 122 ~G~C~~G~~Crf~~~h~~ 139 (611)
+|.|.++.+|..+ |+=
T Consensus 163 ~g~C~~~~~C~kL--HIC 178 (229)
T 3u9g_A 163 KQTCGQPQPCERL--HIC 178 (229)
T ss_dssp CCSCSSSSCCCSB--CSC
T ss_pred CCcCCCCCCCcce--ecc
Confidence 6899999999775 654
No 262
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.78 E-value=0.21 Score=51.38 Aligned_cols=95 Identities=8% Similarity=0.106 Sum_probs=59.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCC-CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc--CCchH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH--KDNNI 455 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~--~~~~~ 455 (611)
++..+.+.++.+.+ +|+.+|-|--+- |. .+..-.|..|....+.+.+|-.++....+.++.|--|+-.. ...++
T Consensus 96 ~~~~v~~~v~~l~~-aGaagv~iEDq~~~k--~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~glde 172 (298)
T 3eoo_A 96 GAFNIARTIRSFIK-AGVGAVHLEDQVGQK--RCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDA 172 (298)
T ss_dssp SHHHHHHHHHHHHH-TTCSEEEEECBCCCC--CTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hCCeEEEECCCCCCc--ccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHH
Confidence 67777888877764 799999884332 20 11011244455555566666555555457888888887432 12344
Q ss_pred HHHHHHHHHHcCCCEEEEEcc
Q psy9514 456 IHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR 476 (611)
+++=++++.++|+|.|-+++.
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~ 193 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAM 193 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHhhHhcCCCEEEeCCC
Confidence 556666778999999988775
No 263
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=95.61 E-value=0.035 Score=59.38 Aligned_cols=125 Identities=9% Similarity=0.020 Sum_probs=83.8
Q ss_pred cccceEEeccCCCccceecccccccc-ccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGL-LQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaL-l~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.||..|-|..|-|.. ....++.+ ..+++...+++++|+++++..+.+.+.....-+.+++..++++|++.|+.+|.
T Consensus 166 ~G~~~~Kik~g~~~~---~~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 242 (400)
T 4dxk_A 166 DGITAMKIWPFDAAA---EKTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHE 242 (400)
T ss_dssp TTCCEEEECTTHHHH---HHHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEE
T ss_pred hCCCEEEEcCCCccc---cccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEE
Confidence 499999887553210 00001111 12356778899999999864444444443323457889999999999988875
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcE
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPL 552 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPV 552 (611)
- - ..+.+++.++++.+. .++||
T Consensus 243 e-------P--------------------------------------------------~~~~~~~~~~~l~~~-~~iPI 264 (400)
T 4dxk_A 243 D-------P--------------------------------------------------IKMDSLSSLTRYAAV-SPAPI 264 (400)
T ss_dssp C-------C--------------------------------------------------BCTTSGGGHHHHHHH-CSSCE
T ss_pred c-------C--------------------------------------------------CCcccHHHHHHHHHh-CCCCE
Confidence 1 1 111234445555554 58999
Q ss_pred EEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 553 YGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 553 IgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+.+.+.+++++.++++.+ .+|.|++=
T Consensus 265 a~dE~~~~~~~~~~~l~~~-a~d~v~~d 291 (400)
T 4dxk_A 265 SASETLGSRWAFRDLLETG-AAGVVMLD 291 (400)
T ss_dssp EECTTCCHHHHHHHHHHTT-CCCEEEEC
T ss_pred EecCCcCCHHHHHHHHHcC-CCCEEEeC
Confidence 9999999999999999998 79999974
No 264
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.47 E-value=0.076 Score=52.94 Aligned_cols=51 Identities=14% Similarity=0.049 Sum_probs=35.9
Q ss_pred HHHHHhhCCCCcEEEecCCCCHH-----------HHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 540 IEKCAQLCSPAPLYGNGDILSYE-----------DYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 540 i~~~~k~~~~iPVIgnGgI~s~e-----------da~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
++++.+...+.+++..|||.. + .+.++++.| +|.+.+||+++..|+.-+.+
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~-~g~~~~dq~rv~t~~~a~~aG--ad~iVvGr~I~~a~dp~~a~ 234 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRP-QGSEAGDQRRIMTPEQALSAG--VDYMVIGRPVTQSVDPAQTL 234 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCC-TTCCCTTCCSCBCHHHHHHTT--CSEEEECHHHHTSSSHHHHH
T ss_pred HHHHHHhcCCCCEEEECCcCC-CCCCccchhccCCHHHHHHcC--CCEEEECHHHcCCCCHHHHH
Confidence 444444434568899999973 3 466777887 99999999999876643333
No 265
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=95.46 E-value=0.0024 Score=52.18 Aligned_cols=28 Identities=29% Similarity=0.739 Sum_probs=0.0
Q ss_pred cccCCcccccCCCCCCCCCCCCCCCcCChhH
Q psy9514 73 EDCYCPFLKDSTLEQTCKYGEKCKFVHDKNV 103 (611)
Q Consensus 73 ~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~ 103 (611)
...+|+.|... +.|+||++|+|.|+..+
T Consensus 49 k~~~C~~f~~~---G~C~~G~~C~f~H~~~e 76 (77)
T 1m9o_A 49 KTELCHKFKLQ---GRCPYGSRCHFIHNPTE 76 (77)
T ss_dssp -------------------------------
T ss_pred cCCcccchhhC---cCCCCcCcCCCCCCCCC
Confidence 46899988765 57999999999998764
No 266
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.40 E-value=0.46 Score=47.69 Aligned_cols=180 Identities=12% Similarity=0.098 Sum_probs=110.5
Q ss_pred eeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC
Q psy9514 372 GVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK 451 (611)
Q Consensus 372 ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~ 451 (611)
.+.++..+.+.+..|. ..|.|-|||+.+=. .| .|.-... +++.+++.+++||-|-||.-..+
T Consensus 3 ~lEvc~~s~~~a~~A~-----~~GAdRIELc~~L~--------~G-GlTPS~g----~i~~~~~~~~ipv~vMIRPR~Gd 64 (256)
T 1twd_A 3 LLEICCYSMECALTAQ-----QNGADRVELCAAPK--------EG-GLTPSLG----VLKSVRQRVTIPVHPIIRPRGGD 64 (256)
T ss_dssp EEEEEESSHHHHHHHH-----HTTCSEEEECBCGG--------GT-CBCCCHH----HHHHHHHHCCSCEEEBCCSSSSC
T ss_pred eEEEEeCCHHHHHHHH-----HcCCCEEEEcCCcc--------cC-CCCCCHH----HHHHHHHHcCCceEEEECCCCCC
Confidence 3578888888887774 34999999974311 11 1222222 33555666789999999972111
Q ss_pred ------CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhh----------hhcchhhHhc
Q psy9514 452 ------DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNII----------HNFMPKFRDW 515 (611)
Q Consensus 452 ------~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~----------~~~~~~l~~~ 515 (611)
+......-++.+.+.|++.|.+-.=+.. ..-|.+...++..+.....-.. ....+.+.+.
T Consensus 65 F~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d----g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~l 140 (256)
T 1twd_A 65 FCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVD----GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAEL 140 (256)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCC----CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHc
Confidence 1233445566788999999866433222 2346666666665554322221 1224567788
Q ss_pred CCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 516 GASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 516 G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
|++.|.-+|... +-....+.++++++....|-|+..|||+ ++.+.+++..| +..+=.+
T Consensus 141 G~~rILTSG~~~----~a~~g~~~L~~Lv~~a~~i~Im~GgGv~-~~Ni~~l~~tG--v~e~H~S 198 (256)
T 1twd_A 141 GIARVLTSGQKS----DALQGLSKIMELIAHRDAPIIMAGAGVR-AENLHHFLDAG--VLEVHSS 198 (256)
T ss_dssp TCCEEEECTTSS----STTTTHHHHHHHHTSSSCCEEEEESSCC-TTTHHHHHHHT--CSEEEEC
T ss_pred CCCEEECCCCCC----CHHHHHHHHHHHHHhhCCcEEEecCCcC-HHHHHHHHHcC--CCeEeEC
Confidence 999997666432 1223567788877654467788888984 67777777554 7766644
No 267
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.30 E-value=0.49 Score=48.74 Aligned_cols=176 Identities=12% Similarity=0.127 Sum_probs=93.4
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~ 457 (611)
.+.+.+.+.++.+. ..++.|+++ -|. ... +| .++++.+++..+.+|..-+.+. +-.++..
T Consensus 34 ~~~~eal~l~~~l~--~~v~~vKVG--~~l--f~~--~G----------~~~V~~Lk~~~g~~IflDlKl~--DIpnTv~ 93 (303)
T 3ru6_A 34 STKEECLQLAKELK--NLDIWLKVG--LRA--YLR--DG----------FKFIEELKKVDDFKIFLDLKFH--DIPNTMA 93 (303)
T ss_dssp SSHHHHHHHHHHTT--TSSCEEEEC--HHH--HHH--HT----------HHHHHHHHHHCCCEEEEEEEEC--SCHHHHH
T ss_pred CCHHHHHHHHHHhC--CCccEEEeC--HHH--HHH--hC----------HHHHHHHHHhhCCCEEEEeeec--cCchhHH
Confidence 35566666666553 246777775 221 111 12 2456666665477777666654 3344555
Q ss_pred HHHHHHHHcCCCEEEEEccccccc----------cc---------cCcChhHHHHHhhhcccC-chhhhhcchhhHhcCC
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQR----------YT---------KQADWDYIEKCAQLCSRD-NNIIHNFMPKFRDWGA 517 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr----------~~---------~~adw~~i~~~~~~~~~~-~~~~~~~~~~l~~~G~ 517 (611)
..++.+.++|+|++|||+-..... +. ....++ -..+..++... .+....++....++|+
T Consensus 94 ~av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s-~~~l~~l~~~~~~e~V~~lA~~a~~~G~ 172 (303)
T 3ru6_A 94 DACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFD-EENFFSIYRQKIEEAVINFSKISYENGL 172 (303)
T ss_dssp HHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCC-HHHHHHHHSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcCCCceEEEEEEecCCC-HHHHHHHHcCCHHHHHHHHHHHHHHcCC
Confidence 677888899999999998432111 00 000110 00000111100 1112234445566777
Q ss_pred ceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHH----------HHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 518 SLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYE----------DYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 518 ~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~e----------da~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
+.+... +.. +..+.+...+-.++..+||.--. .+.+++..| +|.+++||+++..+
T Consensus 173 dGvV~s----------~~E---~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aG--Ad~iVvGr~I~~a~ 237 (303)
T 3ru6_A 173 DGMVCS----------VFE---SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENL--SDYIVVGRPIYKNE 237 (303)
T ss_dssp SEEECC----------TTT---HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTT--CSEEEECHHHHTSS
T ss_pred CEEEEC----------HHH---HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcC--CCEEEEChHHhCCC
Confidence 765431 112 23333444455677788887211 344567777 99999999999865
Q ss_pred ch
Q psy9514 588 WI 589 (611)
Q Consensus 588 ~l 589 (611)
+.
T Consensus 238 dp 239 (303)
T 3ru6_A 238 NP 239 (303)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 268
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=95.26 E-value=0.057 Score=70.88 Aligned_cols=148 Identities=16% Similarity=0.194 Sum_probs=95.6
Q ss_pred cChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH-------HHHHHHHHHcC--CCEEEEEccccccccccCcChh
Q psy9514 421 QRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII-------HNFMPKFRDWG--ASLITLHGRTREQRYTKQADWD 489 (611)
Q Consensus 421 ~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a-------~~la~~l~~aG--vd~ItvhgR~r~qr~~~~adw~ 489 (611)
.+++.+.+.|+.+++.+ +.||.|-+-. . + +.. ..+++.+.+.| ++.|.++......
T Consensus 463 ~~~~~l~~~i~~~r~~~~~~~p~~vNl~~--~-~-p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~--------- 529 (3089)
T 3zen_D 463 VTEQIFNDRIAELETLLEPGRAIQFNTLF--L-D-PYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDL--------- 529 (3089)
T ss_dssp CSHHHHHHHHHHHHHHSCTTCCCEEEEEC--S-C-HHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCH---------
T ss_pred CCHHHHHHHHHHHHHhcCCCCceeechhh--c-C-hhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCch---------
Confidence 47899999999999988 6777665432 1 1 211 36788889999 7889888654310
Q ss_pred HHHHHhhhcccCchh----------hhhcchhhHhcCCc------eEEeccccccccccCCcc-HHHH----HHHHhhCC
Q psy9514 490 YIEKCAQLCSRDNNI----------IHNFMPKFRDWGAS------LITLHGRTREQRYTKQAD-WDYI----EKCAQLCS 548 (611)
Q Consensus 490 ~i~~~~~~~~~~~~~----------~~~~~~~l~~~G~~------~itihgrtr~g~~~~~a~-~~~i----~~~~k~~~ 548 (611)
.+...++...+.. ....+..+.+.|++ .|.+.|.+.-| ..+..+ ...+ .++ +...
T Consensus 530 --ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGG-H~g~~~~~~ll~~~~~~i-r~~~ 605 (3089)
T 3zen_D 530 --EEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGG-HHSWEDLDDLLLATYSEL-RSRS 605 (3089)
T ss_dssp --HHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSE-ECCSCCHHHHHHHHHHHH-TTCT
T ss_pred --hHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCC-CCCcccHHHHHHHHHHHH-hhcC
Confidence 0111111111110 11223355566776 77777766644 222222 2333 333 4456
Q ss_pred CCcEEEecCCCCHHHHHHHH-----------HcCCCccEEEEcHHhhhCC
Q psy9514 549 PAPLYGNGDILSYEDYTESL-----------KKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l-----------~~G~~aD~VmIGRgaL~dP 587 (611)
++|||+.|||.+++++..++ ..| +|+|+||..++.=+
T Consensus 606 ~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lG--AdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 606 NITICVGGGIGTPERSAEYLSGRWAEVHGYPLMP--IDGILVGTAAMATL 653 (3089)
T ss_dssp TEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCC--CSEEECSSTTTTCT
T ss_pred CCeEEEEeCCCCHHHHHHHhccccccccCccCCC--CCEEEecHHHHhCc
Confidence 89999999999999999999 776 99999999999755
No 269
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=95.24 E-value=0.27 Score=51.77 Aligned_cols=135 Identities=11% Similarity=0.101 Sum_probs=92.6
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRT 447 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~ 447 (611)
.+....+...+++.+.+.++.+.+ .||..|-|..|.. .++.-.+.|++|+++++ .++.|-.--
T Consensus 133 v~~~~~~~~~~~e~~~~~a~~~~~-~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~ 196 (365)
T 3ik4_A 133 LETDMTITAGDEVHAAASAKAILA-RGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNC 196 (365)
T ss_dssp EEBCEEECCSCHHHHHHHHHHHHH-TTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHH-cCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 444556667788888877776543 4899988876542 35556778888988874 333333222
Q ss_pred cccCCchHHHHHHHHH--HHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 448 GIHKDNNIIHNFMPKF--RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 448 g~~~~~~~a~~la~~l--~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
++ +..++.+++++| ++.++.+|- |
T Consensus 197 ~~--~~~~A~~~~~~L~~~~~~i~~iE-------e--------------------------------------------- 222 (365)
T 3ik4_A 197 GY--DVERALAFCAACKAESIPMVLFE-------Q--------------------------------------------- 222 (365)
T ss_dssp CC--CHHHHHHHHHHHHHTTCCEEEEE-------C---------------------------------------------
T ss_pred CC--CHHHHHHHHHHHhhCCCCceEEE-------C---------------------------------------------
Confidence 33 346788899999 555554432 1
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
-..+.+++.++++.+. .++||.+.-.++++.++.++++.+ .+|.|++=
T Consensus 223 -----P~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~ik 270 (365)
T 3ik4_A 223 -----PLPREDWAGMAQVTAQ-SGFAVAADESARSAHDVLRIAREG-TASVINIK 270 (365)
T ss_dssp -----CSCTTCHHHHHHHHHH-SSSCEEESTTCSSHHHHHHHHHHT-CCSEEEEC
T ss_pred -----CCCcccHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHhC-CCCEEEEc
Confidence 1223466777777665 489999999999999999999987 79999874
No 270
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.23 E-value=0.17 Score=52.77 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=67.3
Q ss_pred ccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcC--CCEEEEEccccccccccCcChhHHHH
Q psy9514 416 GSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWG--ASLITLHGRTREQRYTKQADWDYIEK 493 (611)
Q Consensus 416 GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aG--vd~ItvhgR~r~qr~~~~adw~~i~~ 493 (611)
|......++.+.++++.++. .+.|+++-+ |.. +...+.++.+.+.| +++|.++... .
T Consensus 73 g~~~~~~~~~~~~~i~~~~~-~g~~v~v~~--g~~---~~~~~~a~~~~~~g~~~~~i~i~~~~---G------------ 131 (336)
T 1ypf_A 73 YIMHRFQPEKRISFIRDMQS-RGLIASISV--GVK---EDEYEFVQQLAAEHLTPEYITIDIAH---G------------ 131 (336)
T ss_dssp CCCCCSSGGGHHHHHHHHHH-TTCCCEEEE--CCS---HHHHHHHHHHHHTTCCCSEEEEECSS---C------------
T ss_pred EEecCCCCHHHHHHHHHHHh-cCCeEEEeC--CCC---HHHHHHHHHHHhcCCCCCEEEEECCC---C------------
Confidence 33334445556667776654 366887773 432 33456678888888 8888775311 0
Q ss_pred HhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCC
Q psy9514 494 CAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPS 573 (611)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~ 573 (611)
.....|+.|+.+.+....+||+ .|.|.+++++..+++.|
T Consensus 132 --------------------------------------~~~~~~~~i~~lr~~~~~~~vi-~G~v~s~e~A~~a~~aG-- 170 (336)
T 1ypf_A 132 --------------------------------------HSNAVINMIQHIKKHLPESFVI-AGNVGTPEAVRELENAG-- 170 (336)
T ss_dssp --------------------------------------CSHHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHT--
T ss_pred --------------------------------------CcHHHHHHHHHHHHhCCCCEEE-ECCcCCHHHHHHHHHcC--
Confidence 1123467777777665344444 57789999999999998
Q ss_pred ccEEEE
Q psy9514 574 ISGVMI 579 (611)
Q Consensus 574 aD~VmI 579 (611)
||+|.+
T Consensus 171 ad~Ivv 176 (336)
T 1ypf_A 171 ADATKV 176 (336)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999999
No 271
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.22 E-value=0.097 Score=53.38 Aligned_cols=117 Identities=13% Similarity=0.078 Sum_probs=72.4
Q ss_pred cccceEEeccCCCccceeccccccccccChH---HHHHHHHHHHhhcCCCEEEEEEc--cccCCchHHHHHHHHHHHcCC
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRAN---ILQSVITCMNEVSSLPITVKTRT--GIHKDNNIIHNFMPKFRDWGA 468 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~---~l~eIv~av~~~~~~PvtVKiR~--g~~~~~~~a~~la~~l~~aGv 468 (611)
.|+|.||+-+ + +|..+..+.+ .+.+-+++|+++++ +..+|+-+ +.-.+.+.....++...++|+
T Consensus 118 ~GAdEIDmVi--------n--ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGA 186 (281)
T 2a4a_A 118 DGADEIDLVI--------N--YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNA 186 (281)
T ss_dssp HTCSEEEEEC--------C--HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTC
T ss_pred cCCCEEEEec--------c--hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCC
Confidence 3999999842 2 3434445566 77888888888775 24555443 322232324577778889999
Q ss_pred CEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhh--
Q psy9514 469 SLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-- 546 (611)
Q Consensus 469 d~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~-- 546 (611)
|+|-.+-+.... -| -..+...+.+.++.
T Consensus 187 DfVKTSTGf~~~----gA----------------------------------------------T~edv~lm~~~v~~~~ 216 (281)
T 2a4a_A 187 DFIKTSTGKVQI----NA----------------------------------------------TPSSVEYIIKAIKEYI 216 (281)
T ss_dssp SEEECCCSCSSC----CC----------------------------------------------CHHHHHHHHHHHHHHH
T ss_pred CEEEeCCCCCCC----CC----------------------------------------------CHHHHHHHHHHHHHhh
Confidence 998654322100 00 01122333444321
Q ss_pred ------CCCCcEEEecCCCCHHHHHHHHHcC
Q psy9514 547 ------CSPAPLYGNGDILSYEDYTESLKKS 571 (611)
Q Consensus 547 ------~~~iPVIgnGgI~s~eda~~~l~~G 571 (611)
...++|-+.|||.|.+++.++++.|
T Consensus 217 ~~~~~tg~~vgVKaaGGIrt~e~al~~i~ag 247 (281)
T 2a4a_A 217 KNNPEKNNKIGLKVSGGISDLNTASHYILLA 247 (281)
T ss_dssp HHCGGGTTCCEEEEESSCCSHHHHHHHHHHH
T ss_pred cccccCCCCceEEEeCCCCCHHHHHHHHHHh
Confidence 3579999999999999999999886
No 272
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=95.21 E-value=0.13 Score=65.08 Aligned_cols=156 Identities=11% Similarity=-0.002 Sum_probs=97.0
Q ss_pred cChHHHHHHHHHHHhhcC--CCEEEEEEccccCC-chHHHHHHHHHHHcCCCE--EEEEccccccccccCcChhHHHHHh
Q psy9514 421 QRANILQSVITCMNEVSS--LPITVKTRTGIHKD-NNIIHNFMPKFRDWGASL--ITLHGRTREQRYTKQADWDYIEKCA 495 (611)
Q Consensus 421 ~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~-~~~a~~la~~l~~aGvd~--ItvhgR~r~qr~~~~adw~~i~~~~ 495 (611)
..++.+.+-|+.+++.++ .||.|-+=.- ... ...-..+++.+.+.|+.. |++.++..... .--.||..+
T Consensus 625 ~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~-~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~~----~~~~~i~~l- 698 (2051)
T 2uv8_G 625 FSAAGMTAAIDSVVSQIEKGSTFGINLIYV-NPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSLE----VASEYIETL- 698 (2051)
T ss_dssp CSHHHHHHHHHHHHHHSCTTCCEEEEEETT-CTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCHH----HHHHHHHHS-
T ss_pred CCHHHHHHHHHHHHHhcCCCCceEEEEeec-ChhhhhhhHHHHHHHHHcCCCcceEEecCCCCchh----hHHHHHHHc-
Confidence 368888999999998774 6777775432 111 011127888889999988 88887653200 000133333
Q ss_pred hhcccCc-----hhhhhcchhhHhcCCceE---EeccccccccccCCc-----cHHHHHHHHhhCCCCcEEEecCCCCHH
Q psy9514 496 QLCSRDN-----NIIHNFMPKFRDWGASLI---TLHGRTREQRYTKQA-----DWDYIEKCAQLCSPAPLYGNGDILSYE 562 (611)
Q Consensus 496 ~~~~~~~-----~~~~~~~~~l~~~G~~~i---tihgrtr~g~~~~~a-----~~~~i~~~~k~~~~iPVIgnGgI~s~e 562 (611)
-++... ......+....++|++.+ .+.|...-| ..+.. -+..+.+++. .++||||+.|||.+.+
T Consensus 699 -G~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGG-H~g~~d~~~~~l~l~~~v~~-~~~ipviaaGGi~dg~ 775 (2051)
T 2uv8_G 699 -GLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGG-HHSFEDAHTPMLQMYSKIRR-HPNIMLIFGSGFGSAD 775 (2051)
T ss_dssp -CCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSE-ECCSCCSSHHHHHHHHHHTT-CTTBCCEEESSCCSHH
T ss_pred -CCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCC-CCCcccccccHHHHHHHHHh-cCCceEEEeCCCCCHH
Confidence 111111 011223356677899994 444543333 33321 2233555544 4689999999999999
Q ss_pred HHHHHH-----------HcCCCccEEEEcHHhhhCC
Q psy9514 563 DYTESL-----------KKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 563 da~~~l-----------~~G~~aD~VmIGRgaL~dP 587 (611)
++..+| ..| +|||+||+-+|.=.
T Consensus 776 ~~~aaL~g~w~~~~g~~~lg--adGv~~GTrf~~t~ 809 (2051)
T 2uv8_G 776 DTYPYLTGEWSTKFDYPPMP--FDGFLFGSRVMIAK 809 (2051)
T ss_dssp HHTHHHHTCGGGTTTCCCCC--CSCEECSGGGTTST
T ss_pred HHHHHHccccccccCccCCC--CceeeechHHHhCc
Confidence 999999 666 99999999999754
No 273
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=95.19 E-value=0.0041 Score=46.37 Aligned_cols=28 Identities=21% Similarity=0.432 Sum_probs=24.8
Q ss_pred CcccCCcccccCCCCCCCCCCCCCCCcCChh
Q psy9514 72 PEDCYCPFLKDSTLEQTCKYGEKCKFVHDKN 102 (611)
Q Consensus 72 ~~~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~ 102 (611)
....+|..|+.. +-|++|.+|.|+|||+
T Consensus 18 ~~~~iC~~FSay---GwCp~G~~Cp~SHDiD 45 (50)
T 2fc6_A 18 HPTSICDNFSAY---GWCPLGPQCPQSHDIS 45 (50)
T ss_dssp CCSCBCSHHHHT---CCCTTGGGCSSBCCCC
T ss_pred cccchhhhcccc---ccCCCCCCCCccccCC
Confidence 468999999987 6799999999999985
No 274
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.19 E-value=0.017 Score=58.34 Aligned_cols=55 Identities=25% Similarity=0.156 Sum_probs=47.3
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhC-----CchHHHHHc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIK-----PWIFQEIKE 595 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~d-----P~lf~ei~~ 595 (611)
+.+.++++++. .++||...|||.+. ++.+++ .| +|-|.+|..++.| |.++.++.+
T Consensus 64 n~~~i~~i~~~-~~~pv~vgGGir~~-~~~~~l-~G--a~~Viigs~a~~~~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 64 NDDAAREALQE-SPQFLQVGGGINDT-NCLEWL-KW--ASKVIVTSWLFTKEGHFQLKRLERLTE 123 (260)
T ss_dssp CHHHHHHHHHH-STTTSEEESSCCTT-THHHHT-TT--CSCEEECGGGBCTTCCBCHHHHHHHHH
T ss_pred CHHHHHHHHhc-CCceEEEeCCCCHH-HHHHHh-cC--CCEEEECcHHHhhcCCCCHHHHHHHHH
Confidence 45667777666 47999999999987 999999 76 9999999999999 999988865
No 275
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=95.16 E-value=0.25 Score=48.78 Aligned_cols=126 Identities=14% Similarity=0.049 Sum_probs=77.9
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.|+|.||+-+ + +|..+..+.+.+.+-++++++.++ .++.|-+=++.- ..+.....++...++|+|+|-
T Consensus 78 ~GAdEID~Vi--------n--ig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L-t~eei~~a~~ia~eaGADfVK 146 (226)
T 1vcv_A 78 EVADEIDVVA--------P--IGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL-RDEERYTLYDIIAEAGAHFIK 146 (226)
T ss_dssp TTCSEEEEEC--------C--HHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC-CHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCCEEEEec--------c--hhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC-CHHHHHHHHHHHHHcCCCEEE
Confidence 5999999842 2 344555678888888899998874 333333333332 235566777788899999987
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc---cHHHHHHHHhhC-C
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA---DWDYIEKCAQLC-S 548 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a---~~~~i~~~~k~~-~ 548 (611)
.+-+.....| =. . ....+.+ +...+++.++.. .
T Consensus 147 TSTGf~~~~~--------~~------------------~-----------------~~~~~gAt~~dv~lm~~~i~~~g~ 183 (226)
T 1vcv_A 147 SSTGFAEEAY--------AA------------------R-----------------QGNPVHSTPERAAAIARYIKEKGY 183 (226)
T ss_dssp CCCSCCCHHH--------HH------------------H-----------------TTCCSSCCHHHHHHHHHHHHHHTC
T ss_pred eCCCCCcccc--------cc------------------c-----------------cCCCCCCCHHHHHHHHHHHHHhCC
Confidence 6533210000 00 0 0001222 333444443322 3
Q ss_pred CCcEEEecCCCCHHHHHHHHHc---CCCcc
Q psy9514 549 PAPLYGNGDILSYEDYTESLKK---SPSIS 575 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~---G~~aD 575 (611)
.++|-+.|||.|++++.++++. | ++
T Consensus 184 ~v~vKaaGGirt~~~al~~i~a~~~G--a~ 211 (226)
T 1vcv_A 184 RLGVKMAGGIRTREQAKAIVDAIGWG--ED 211 (226)
T ss_dssp CCEEEEESSCCSHHHHHHHHHHHCSC--SC
T ss_pred CceEEEeCCCCCHHHHHHHHHHHHCC--CC
Confidence 5999999999999999999998 7 65
No 276
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.14 E-value=0.097 Score=55.30 Aligned_cols=95 Identities=9% Similarity=0.120 Sum_probs=67.7
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD 501 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~ 501 (611)
.++...+.++.+++....|+.+-+-.. . .+.++.+.++|++.|+|+.....
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~--~-----~e~a~~l~eaGad~I~ld~a~G~---------------------- 129 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVN--E-----IERAKLLVEAGVDVIVLDSAHGH---------------------- 129 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTT--C-----HHHHHHHHHTTCSEEEECCSCCS----------------------
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCC--H-----HHHHHHHHHcCcCeEEEeCCCCC----------------------
Confidence 355667788888876678887776432 2 57788899999999988532210
Q ss_pred chhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 502 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 502 ~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.....+.++++.+.. ++|||+ |.+.|++++..+++.| +|+|.+|
T Consensus 130 -------------------------------~~~~~~~i~~i~~~~-~~~Viv-g~v~t~e~A~~l~~aG--aD~I~VG 173 (361)
T 3khj_A 130 -------------------------------SLNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENG--ADGIKVG 173 (361)
T ss_dssp -------------------------------BHHHHHHHHHHHHHC-CCEEEE-EEECSHHHHHHHHHTT--CSEEEEC
T ss_pred -------------------------------cHHHHHHHHHHHHhc-CCcEEE-ccCCCHHHHHHHHHcC--cCEEEEe
Confidence 001134566665555 889986 6689999999999987 9999996
No 277
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=95.06 E-value=0.1 Score=58.03 Aligned_cols=78 Identities=10% Similarity=0.074 Sum_probs=54.2
Q ss_pred chhhHhcC---CceEEeccc----ccccccc-CCccHHHHHHHHhhC-----CCCcEEEecCCCCHHHHHHHHH------
Q psy9514 509 MPKFRDWG---ASLITLHGR----TREQRYT-KQADWDYIEKCAQLC-----SPAPLYGNGDILSYEDYTESLK------ 569 (611)
Q Consensus 509 ~~~l~~~G---~~~itihgr----tr~g~~~-~~a~~~~i~~~~k~~-----~~iPVIgnGgI~s~eda~~~l~------ 569 (611)
+....+.| +++|.+... |+.+ +. .+..++.++++.+.. .++||++-||| +++++.+++.
T Consensus 121 a~~A~~~G~~~aDYv~~Gpvf~T~tK~~-~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g 198 (540)
T 3nl6_A 121 VDELSKMGPDMVDYIGVGTLFPTLTKKN-PKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSN 198 (540)
T ss_dssp HHHHHHTCC--CCEEEESCCSCCCCCC-----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTT
T ss_pred HHHHHHcCCCCCCEEEEcCCCCCCCCCC-cCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccc
Confidence 34556678 999976332 2221 21 233467777665542 58999999999 7999999997
Q ss_pred --cCCCccEEEEcHHhhhCCchH
Q psy9514 570 --KSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 570 --~G~~aD~VmIGRgaL~dP~lf 590 (611)
.| +|+|+++++++..|+..
T Consensus 199 ~~~G--adgvAVvsaI~~a~dp~ 219 (540)
T 3nl6_A 199 GKRS--LDGICVVSDIIASLDAA 219 (540)
T ss_dssp SSCB--CSCEEESHHHHTCTTHH
T ss_pred cccC--ceEEEEeHHHhcCCCHH
Confidence 55 99999999999765543
No 278
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.05 E-value=0.024 Score=54.72 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=42.4
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
..|.++.+. .++|||+.|.|.+.+|+.+++++| |++|+.+...||+-.
T Consensus 140 ~iI~~i~~~-~~~PiIaGGlI~~~edv~~al~aG--A~aVsTs~~~LW~~~ 187 (192)
T 3kts_A 140 EQVQKMTQK-LHIPVIAGGLIETSEQVNQVIASG--AIAVTTSNKHLWEGH 187 (192)
T ss_dssp HHHHHHHHH-HCCCEEEESSCCSHHHHHHHHTTT--EEEEEECCGGGGTTC
T ss_pred HHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcC--CeEEEeCCHHHhCcc
Confidence 567777665 589999999999999999999998 999999999998753
No 279
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=95.00 E-value=0.11 Score=50.85 Aligned_cols=143 Identities=8% Similarity=-0.048 Sum_probs=82.9
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccc-ccccccCcChhHHHHHhhhcccCc----
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTR-EQRYTKQADWDYIEKCAQLCSRDN---- 502 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r-~qr~~~~adw~~i~~~~~~~~~~~---- 502 (611)
++++.+++..+.+|..-+..+ |-.++....++.+.++ +|++|||+-.. .... .++ .+-..+--|....+
T Consensus 40 ~~v~~L~~~~g~~VflDlK~~--DIpnTv~~a~~~~~~~-ad~vTvh~~~G~~~~~-~~~--~~~~~v~vLts~s~~~~~ 113 (215)
T 3ve9_A 40 EKVKELVGLVDGIKILDLKLA--DIDNTMILIVDELKDI-TNSFIAHAFVGVEGSL-ASL--SQRVDLFLVLSMSHPGWN 113 (215)
T ss_dssp HHHHHHHTTCCSEEEEEEEEC--SCHHHHHHHHHHHTTT-CSEEEEEGGGCTTTTH-HHH--HHHSEEEEECCCSSTTCC
T ss_pred HHHHHHHHhcCCcEEEEeccc--CchhHHHHHHHHHHHh-hheEEEeCCCCcHHHH-HhH--hcCCCEEEEEecCCcchH
Confidence 345666664578888877764 3334445566788899 99999997543 2110 000 00000001111111
Q ss_pred -hhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHH--HHHHHHHcCCCccEEEE
Q psy9514 503 -NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYE--DYTESLKKSPSISGVMI 579 (611)
Q Consensus 503 -~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~e--da~~~l~~G~~aD~VmI 579 (611)
.....++...+++|++.+...+ -....++.+.+...+ .++..|||. ++ +..++++.| +|.+++
T Consensus 114 ~~~v~~~a~~a~~~G~~GvV~sa----------t~~~e~~~ir~~~~~-f~~v~pGI~-~~g~~~~~a~~~G--ad~iVv 179 (215)
T 3ve9_A 114 DAFYPYLREVARRVNPKGFVAPA----------TRPSMISRVKGDFPD-KLVISPGVG-TQGAKPGIALCHG--ADYEIV 179 (215)
T ss_dssp GGGHHHHHHHHHHHCCSEEECCT----------TSHHHHHHHHHHCTT-SEEEECCTT-STTCCTTHHHHTT--CSEEEE
T ss_pred HHHHHHHHHHHHHcCCCceeeCC----------CCHHHHHHHHHhCCC-cEEEcCCCC-cCcCCHHHHHHcC--CCEEEe
Confidence 1123455566778876655311 113445555555556 777889997 33 566778887 999999
Q ss_pred cHHhhhCCchH
Q psy9514 580 GRGALIKPWIF 590 (611)
Q Consensus 580 GRgaL~dP~lf 590 (611)
||+++.-++..
T Consensus 180 Gr~I~~a~dp~ 190 (215)
T 3ve9_A 180 GRSVYQSADPV 190 (215)
T ss_dssp CHHHHTSSSHH
T ss_pred CHHHcCCCCHH
Confidence 99999866543
No 280
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.93 E-value=0.048 Score=57.62 Aligned_cols=71 Identities=13% Similarity=0.084 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccC
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTK 533 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~ 533 (611)
+.+.+.++++.++|+++|+++.-....
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~----------------------------------------------------- 125 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA----------------------------------------------------- 125 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS-----------------------------------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc-----------------------------------------------------
Confidence 456788999999999999997532100
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..-|+.++.+.+...++|||+ |+|.|++++..+++.| ||+|.+|
T Consensus 126 ~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aG--aD~I~Vg 169 (361)
T 3r2g_A 126 KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCG--ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTT--CSEEEEC
T ss_pred HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcC--CCEEEEc
Confidence 012456666666555788887 6799999999999997 9999985
No 281
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=94.92 E-value=0.77 Score=46.90 Aligned_cols=93 Identities=17% Similarity=0.106 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCC-CccceeccccccccccChHHHHHHHHHHHhh-cCCCEEEEEEccc-cCCchH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQGSGSGLLQRANILQSVITCMNEV-SSLPITVKTRTGI-HKDNNI 455 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~-~~~PvtVKiR~g~-~~~~~~ 455 (611)
+++.+.+.+..+.+ +|+.+|-|--+- |. +.....+.| -..+...+-|++++++ .+.++.|--|+-. ....+.
T Consensus 95 ~~~~~~~~v~~l~~-aGa~gv~iED~~~pK---rcgh~~gkl-~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ 169 (287)
T 3b8i_A 95 NALNVMRTVVELER-AGIAALTIEDTLLPA---QFGRKSTDL-ICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDA 169 (287)
T ss_dssp SHHHHHHHHHHHHH-HTCSEEEEECBCCSC---CTTTCTTCB-CCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHH
T ss_pred CHHHHHHHHHHHHH-hCCeEEEEcCCCCcc---ccCCCCCCc-cCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHH
Confidence 77788888888764 799999886553 42 111122234 4444444445555443 4566777777643 122356
Q ss_pred HHHHHHHHHHcCCCEEEEEcc
Q psy9514 456 IHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR 476 (611)
+++=+++++++|+++|-+++-
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~ 190 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGV 190 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEecCC
Confidence 777788899999999998863
No 282
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.88 E-value=0.39 Score=49.53 Aligned_cols=92 Identities=16% Similarity=0.120 Sum_probs=57.6
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCC-Cccceeccc-cccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc--CCch
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQG-SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH--KDNN 454 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g-~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~--~~~~ 454 (611)
++..+.+.++.+.+ +|+.+|-|--+- | .+-.. .|..|.. .+...+-|++++.+ +.++.|--|+... ...+
T Consensus 102 ~~~~v~~~v~~l~~-aGaagv~iED~~~~---krcGh~~gk~l~~-~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~ 175 (305)
T 3ih1_A 102 GVLNVARTAVEMVE-AKVAAVQIEDQQLP---KKCGHLNGKKLVT-TEELVQKIKAIKEV-APSLYIVARTDARGVEGLD 175 (305)
T ss_dssp SHHHHHHHHHHHHH-TTCSEEEEECBCSS---CCTTCTTCCCBCC-HHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHH
T ss_pred CHHHHHHHHHHHHH-hCCcEEEECCCCCC---cccCCCCCCcccC-HHHHHHHHHHHHHc-CCCeEEEEeeccccccCHH
Confidence 36777777777764 799999885542 2 11111 2333443 33344445555555 7888888786432 2345
Q ss_pred HHHHHHHHHHHcCCCEEEEEcc
Q psy9514 455 IIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR 476 (611)
.+++=+++++++|+|+|-+++.
T Consensus 176 ~ai~Ra~ay~eAGAD~i~~e~~ 197 (305)
T 3ih1_A 176 EAIERANAYVKAGADAIFPEAL 197 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEETTC
T ss_pred HHHHHHHHHHHcCCCEEEEcCC
Confidence 6777777889999999988764
No 283
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.84 E-value=1.1 Score=45.95 Aligned_cols=94 Identities=14% Similarity=0.087 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCC-Cccceeccccc---cccccChHHHHHHHHHHHhhcCCCEEEEEEcccc---C
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQGSG---SGLLQRANILQSVITCMNEVSSLPITVKTRTGIH---K 451 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g~G---saLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~---~ 451 (611)
++..+.+.++.+. .+|+.+|-|--+- | .+-...| ..|....+.+.+|-.++....+.++.|--|+-.. .
T Consensus 92 ~~~~v~~~v~~l~-~aGaagv~iED~~~~---k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~ 167 (295)
T 1s2w_A 92 NFNNARRLVRKLE-DRGVAGACLEDKLFP---KTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGW 167 (295)
T ss_dssp SHHHHHHHHHHHH-HTTCCEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTC
T ss_pred CHHHHHHHHHHHH-HcCCcEEEECCCCCC---ccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccc
Confidence 3567777777776 5799999886553 3 1111122 3344434445444444444446677777786422 1
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
..+.+++=+++++++|+|+|-+++.
T Consensus 168 g~~~ai~Ra~ay~eAGAd~i~~e~~ 192 (295)
T 1s2w_A 168 GLDEALKRAEAYRNAGADAILMHSK 192 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 2366777788899999999998763
No 284
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=94.82 E-value=0.82 Score=46.74 Aligned_cols=162 Identities=11% Similarity=0.066 Sum_probs=90.0
Q ss_pred CCCCCHHHHHHHHHcCCCEEEecCc-ccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHHHHHHHhhhccceeee
Q psy9514 267 TTVGNLPFRRLCKKWGADITCSEMA-VATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFVD 345 (611)
Q Consensus 267 t~~gnlpfRrl~~~~Ga~li~tEm~-~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~id 345 (611)
.+.-+.++=+++.+.|++.+++-.. ++.. .|.+. -..+ ..+.+...++.+...
T Consensus 20 ~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~--~G~pD----------~~~v-------t~~em~~~~~~I~~~------- 73 (290)
T 2hjp_A 20 MAAHNPLVAKLAEQAGFGGIWGSGFELSAS--YAVPD----------ANIL-------SMSTHLEMMRAIAST------- 73 (290)
T ss_dssp EECSSHHHHHHHHHHTCSEEEECHHHHHHH--TTSCT----------TTCS-------CHHHHHHHHHHHHTT-------
T ss_pred ecCCCHHHHHHHHHcCCCEEEEChHHHHHh--CCCCC----------CCCC-------CHHHHHHHHHHHHhc-------
Confidence 3456888889999999999998753 3322 34321 1100 023333333434331
Q ss_pred ccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCC-Cccceecccc---cccccc
Q psy9514 346 VNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQGS---GSGLLQ 421 (611)
Q Consensus 346 ln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g~---GsaLl~ 421 (611)
.+.|. .-|.+++ +| ++..+.+.+..+.+ +|+.+|-|--+- | .+-... |..|..
T Consensus 74 ----~~~Pv-----------iaD~d~G---yg-~~~~~~~~v~~l~~-aGa~gv~iED~~~~---k~cgH~~~~~k~l~p 130 (290)
T 2hjp_A 74 ----VSIPL-----------IADIDTG---FG-NAVNVHYVVPQYEA-AGASAIVMEDKTFP---KDTSLRTDGRQELVR 130 (290)
T ss_dssp ----CSSCE-----------EEECTTT---TS-SHHHHHHHHHHHHH-HTCSEEEEECBCSS---CCC-------CCBCC
T ss_pred ----CCCCE-----------EEECCCC---CC-CHHHHHHHHHHHHH-hCCeEEEEcCCCCC---ccccccccCCCcccC
Confidence 11111 1122333 34 77788888888764 799999886553 3 111112 334444
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEcccc---CCchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIH---KDNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~---~~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
..+.+.+|-.++......++.|--|+-.. ...+.+++=+++++++|+++|-++++.
T Consensus 131 ~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~ 189 (290)
T 2hjp_A 131 IEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQ 189 (290)
T ss_dssp HHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCC
Confidence 33444444444444334567777776322 224667777888999999999998854
No 285
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=94.72 E-value=0.64 Score=45.89 Aligned_cols=179 Identities=17% Similarity=0.195 Sum_probs=97.9
Q ss_pred cccccccceeeecccCc-hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCE
Q psy9514 363 GLLQRANLFGVQLCGNN-PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPI 441 (611)
Q Consensus 363 ~l~~~~~~~ivQi~g~~-p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~Pv 441 (611)
+|..+...+.|-|||-+ ++++ ++++ +|.|.|=+.+--+++.. =.++.+.+|++. ...|+
T Consensus 13 ~~~p~~~~M~VKICGit~~ed~-~a~~-----~gaD~iGfIf~~~SpR~----------V~~~~A~~i~~~----~~~~~ 72 (228)
T 4aaj_A 13 GLVPRGSHMFVKICGIKSLEEL-EIVE-----KHADATGVVVNSNSKRR----------IPLEKAREIIEN----SAIPV 72 (228)
T ss_dssp -------CCEEEECCCCSHHHH-HHHH-----TTCSEEEEECSSSSTTB----------CCHHHHHHHHHH----CSSCE
T ss_pred ccCCCCCceEEEECCCCcHHHH-HHHH-----cCCCEEEEEecCCCCCC----------CCHHHHHHHHHh----hCCCC
Confidence 45555667889999994 5543 4432 38898888774332211 135555555543 33333
Q ss_pred EEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-----cccCch---------hhhh
Q psy9514 442 TVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-----CSRDNN---------IIHN 507 (611)
Q Consensus 442 tVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-----~~~~~~---------~~~~ 507 (611)
.+ .+...+ ..+++..+...+.++|.+||.-. .+++..+... ++.... ....
T Consensus 73 ~~---v~v~v~---~~ei~~~i~~~~ld~vQLHG~E~---------~~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~ 137 (228)
T 4aaj_A 73 FL---VSTMVG---FSEWAMAIERTGAQYIQVHSNAL---------PQTIDTLKKEFGVFVMKAFRVPTISKNPEEDANR 137 (228)
T ss_dssp EE---EECCCC---HHHHHHHHHHHTCSEEEECSCCC---------HHHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHH
T ss_pred EE---EeccCc---hHHHHHHHHhccchheecccccC---------HHHHHHHhhccCceEEEEEEecccccchhhhHHH
Confidence 21 122222 23566778889999999999642 2334444322 111110 0111
Q ss_pred cchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 508 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 508 ~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
....+....++++.+... |+.....||..+..+.. +.|+|..||+ +++.+.+++... +..+|=|..|.=
T Consensus 138 ~~~~~~~~~~d~~LlDs~---GGtG~~fDW~~~~~~~~---~~p~iLAGGL-~peNV~~Ai~~~-~P~gVDVsSGVE 206 (228)
T 4aaj_A 138 LLSEISRYNADMVLLDTG---AGSGKLHDLRVSSLVAR---KIPVIVAGGL-NAENVEEVIKVV-KPYGVDVSSGVE 206 (228)
T ss_dssp HHHHHHHSCCSEEEEEC----------CCCHHHHHHHH---HSCEEEESSC-CTTTHHHHHHHH-CCSEEEESGGGE
T ss_pred HHHHHhccCCCEEccCCC---CCCcCcCChHHHHHhhh---cCCeEEECCC-CHHHHHHHHHHh-CCCEEEeCCCCC
Confidence 223344556888877542 22234468988877654 4699999999 688888888754 477887777653
No 286
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.67 E-value=0.14 Score=58.48 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=76.4
Q ss_pred hhHHHHHHHHhhhccceeeeccCCCCc-----------chhhccCCCccc---------c-------ccccceeeecc--
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGCPI-----------EFIYKQGSGSGL---------L-------QRANLFGVQLC-- 376 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gcp~-----------~~~~~~~~~~~l---------~-------~~~~~~ivQi~-- 376 (611)
+.+..+|+...+ .++|.|+|+++|+. +..-++.+++-. + ..+.++.+-+.
T Consensus 156 ~~f~~aA~~a~~-aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~ 234 (690)
T 3k30_A 156 RWHRNAVRRSIE-AGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVE 234 (690)
T ss_dssp HHHHHHHHHHHH-HTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred HHHHHHHHHHHH-cCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcc
Confidence 455677766554 67999999987765 333333333211 0 01345666663
Q ss_pred -----cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC
Q psy9514 377 -----GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK 451 (611)
Q Consensus 377 -----g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~ 451 (611)
|.+.+++.+.++.+++ ++|.|+|+.|.-........+ ..+.....+++.+++.+++||++- |.-.
T Consensus 235 ~~~~~g~~~~~~~~~~~~l~~--~~d~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~pvi~~---G~i~ 304 (690)
T 3k30_A 235 EEIDGGITREDIEGVLRELGE--LPDLWDFAMGSWEGDSVTSRF-----APEGRQEEFVAGLKKLTTKPVVGV---GRFT 304 (690)
T ss_dssp CCSTTSCCHHHHHHHHHHHTT--SSSEEEEECSCHHHHTCCTTT-----CCTTTTHHHHTTSGGGCSSCEEEC---SCCC
T ss_pred ccCCCCCCHHHHHHHHHHHHh--hcCEEEEecccccccCCCCcc-----CCccccHHHHHHHHHHcCCeEEEe---CCCC
Confidence 4457888888888864 699999998751100000000 011122456778888889998653 3211
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
+.+ ...+.|++.++|+|.+ ||
T Consensus 305 ~~~---~a~~~l~~g~~d~v~~-gR 325 (690)
T 3k30_A 305 SPD---AMVRQIKAGILDLIGA-AR 325 (690)
T ss_dssp CHH---HHHHHHHTTSCSEEEE-SH
T ss_pred CHH---HHHHHHHCCCcceEEE-cH
Confidence 222 2233445555998865 44
No 287
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=94.65 E-value=0.23 Score=52.36 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=69.8
Q ss_pred hhHHHHHHHHhhhccceeeeccCCC---------Ccc-hhhccCCCc---------cccc---c---ccceeeeccc---
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGC---------PIE-FIYKQGSGS---------GLLQ---R---ANLFGVQLCG--- 377 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gc---------p~~-~~~~~~~~~---------~l~~---~---~~~~ivQi~g--- 377 (611)
+.+..+|+.+.+ .++|.|+||++| |.. ..-++.+++ +++. + +.++++-+..
T Consensus 161 ~~f~~aA~~a~~-aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~ 239 (365)
T 2gou_A 161 ADYRQAALNAME-AGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTT 239 (365)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCC
T ss_pred HHHHHHHHHHHH-cCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccc
Confidence 456666665544 679999999887 431 111222221 0111 1 1267774443
Q ss_pred -------CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 378 -------NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 378 -------~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
.+.+++.+.++.++ ..|+|.|++..+.- . +..- ...++++.+++.+++||.+- |.-
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~-~~G~d~i~v~~~~~-----~---~~~~-----~~~~~~~~i~~~~~iPvi~~---Ggi 302 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLN-KHRIVYLHIAEVDW-----D---DAPD-----TPVSFKRALREAYQGVLIYA---GRY 302 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHH-HTTCSEEEEECCBT-----T---BCCC-----CCHHHHHHHHHHCCSEEEEE---SSC
T ss_pred cCCCCCCCCHHHHHHHHHHHH-HcCCCEEEEeCCCc-----C---CCCC-----ccHHHHHHHHHHCCCcEEEe---CCC
Confidence 25567788888876 46999999976421 0 1100 01256778888888887653 221
Q ss_pred CCchHHHHHHHHHHHcC-CCEEEE
Q psy9514 451 KDNNIIHNFMPKFRDWG-ASLITL 473 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aG-vd~Itv 473 (611)
+ . +.+..+.+.| +|+|.+
T Consensus 303 -~---~-~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 303 -N---A-EKAEQAINDGLADMIGF 321 (365)
T ss_dssp -C---H-HHHHHHHHTTSCSEEEC
T ss_pred -C---H-HHHHHHHHCCCcceehh
Confidence 2 2 2334444445 998865
No 288
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.60 E-value=1.2 Score=46.19 Aligned_cols=96 Identities=8% Similarity=-0.009 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC--CchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK--DNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~--~~~~a 456 (611)
++..+.+.++.+.+ +|+.+|-|--+-..+ ++..-.|..|......+.+|-.++....+.++.|--|+-... ..+.+
T Consensus 114 ~~~~v~~tv~~l~~-aGaagv~iED~~~~k-~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~a 191 (318)
T 1zlp_A 114 GPLNVQRFIRELIS-AGAKGVFLEDQVWPK-KCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEG 191 (318)
T ss_dssp SHHHHHHHHHHHHH-TTCCEEEEECBCSSC-CCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-cCCcEEEECCCCCCc-cccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHH
Confidence 67788888888764 899999886543100 111112334444334444444433333356677777753211 12356
Q ss_pred HHHHHHHHHcCCCEEEEEcc
Q psy9514 457 HNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR 476 (611)
++=+++++++|+|+|-+++-
T Consensus 192 i~Ra~Ay~eAGAd~i~~e~~ 211 (318)
T 1zlp_A 192 IRRANLYKEAGADATFVEAP 211 (318)
T ss_dssp HHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 66677889999999988764
No 289
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.56 E-value=0.21 Score=48.95 Aligned_cols=92 Identities=15% Similarity=0.233 Sum_probs=70.0
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCc
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGAS 518 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~ 518 (611)
.|+..-+|. .+.+.+..+++.|.+.|+..|.|.-|+.
T Consensus 13 ~~vi~Vir~---~~~~~a~~~a~al~~gGi~~iEvt~~t~---------------------------------------- 49 (217)
T 3lab_A 13 KPLIPVIVI---DDLVHAIPMAKALVAGGVHLLEVTLRTE---------------------------------------- 49 (217)
T ss_dssp CSEEEEECC---SCGGGHHHHHHHHHHTTCCEEEEETTST----------------------------------------
T ss_pred CCEEEEEEc---CCHHHHHHHHHHHHHcCCCEEEEeCCCc----------------------------------------
Confidence 577777775 3457899999999999999999976652
Q ss_pred eEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 519 LITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 519 ~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
...+.|+++.+.+. -++||.|-|.|.++++++++.| +++++.= + .+|.+.+..++
T Consensus 50 ----------------~a~~~I~~l~~~~p-~~~IGAGTVlt~~~a~~ai~AG--A~fivsP-~--~~~evi~~~~~ 104 (217)
T 3lab_A 50 ----------------AGLAAISAIKKAVP-EAIVGAGTVCTADDFQKAIDAG--AQFIVSP-G--LTPELIEKAKQ 104 (217)
T ss_dssp ----------------THHHHHHHHHHHCT-TSEEEEECCCSHHHHHHHHHHT--CSEEEES-S--CCHHHHHHHHH
T ss_pred ----------------cHHHHHHHHHHHCC-CCeEeeccccCHHHHHHHHHcC--CCEEEeC-C--CcHHHHHHHHH
Confidence 23467777777764 4899999999999999999998 9999762 1 35555554443
No 290
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=94.52 E-value=0.3 Score=51.47 Aligned_cols=128 Identities=12% Similarity=0.049 Sum_probs=70.0
Q ss_pred hhHHHHHHHHhhhccceeeeccCCC---------Cc-chhhccCCCc---------cccc---c---ccceeeecccC--
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGC---------PI-EFIYKQGSGS---------GLLQ---R---ANLFGVQLCGN-- 378 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gc---------p~-~~~~~~~~~~---------~l~~---~---~~~~ivQi~g~-- 378 (611)
+.+..+|+.+.+ .++|.|+||++| |. +..-++.+++ +++. + +.++++-+...
T Consensus 161 ~~f~~aA~~a~~-aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~ 239 (364)
T 1vyr_A 161 NDFRQAVANARE-AGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSC
T ss_pred HHHHHHHHHHHH-cCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 356666665544 679999999886 43 1111222221 0010 0 12667633332
Q ss_pred ---------chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccc
Q psy9514 379 ---------NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGI 449 (611)
Q Consensus 379 ---------~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~ 449 (611)
+.+.+.+.++.++ ..|+|.|++..+--. ...+ .. .+.++.+++.+++||.+-=++
T Consensus 240 ~~~~~~~~~~~~~~~~~a~~l~-~~G~d~i~v~~~~~~-----~~~~----~~----~~~~~~v~~~~~iPvi~~Ggi-- 303 (364)
T 1vyr_A 240 FQNVDNGPNEEADALYLIEELA-KRGIAYLHMSETDLA-----GGKP----YS----EAFRQKVRERFHGVIIGAGAY-- 303 (364)
T ss_dssp BTTBCCCTTHHHHHHHHHHHHH-HTTCSEEEEECCBTT-----BCCC----CC----HHHHHHHHHHCCSEEEEESSC--
T ss_pred cccccCCCCCHHHHHHHHHHHH-HhCCCEEEEecCccc-----CCCc----cc----HHHHHHHHHHCCCCEEEECCc--
Confidence 5566777788775 469999999864210 0011 11 246677888888887664221
Q ss_pred cCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 450 HKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 450 ~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
+ .....+.|++.++|+|.+ ||
T Consensus 304 --t---~~~a~~~l~~g~aD~V~~-gR 324 (364)
T 1vyr_A 304 --T---AEKAEDLIGKGLIDAVAF-GR 324 (364)
T ss_dssp --C---HHHHHHHHHTTSCSEEEE-SH
T ss_pred --C---HHHHHHHHHCCCccEEEE-CH
Confidence 1 223334444555998875 44
No 291
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=94.29 E-value=1.3 Score=44.95 Aligned_cols=92 Identities=15% Similarity=0.120 Sum_probs=59.7
Q ss_pred ccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhh---cCCCEEEEEEccccC-
Q psy9514 376 CGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEV---SSLPITVKTRTGIHK- 451 (611)
Q Consensus 376 ~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~---~~~PvtVKiR~g~~~- 451 (611)
+|.+++.+.+.++.+.+ +|+.+|-|--+-.. -|..|. ..+...+-|++++.+ .|+|+.|--|+-..-
T Consensus 87 yg~~~~~~~~~v~~l~~-aGaagv~iED~~~~-------~~k~l~-~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~ 157 (275)
T 2ze3_A 87 YGHAPEDVRRTVEHFAA-LGVAGVNLEDATGL-------TPTELY-DLDSQLRRIEAARAAIDASGVPVFLNARTDTFLK 157 (275)
T ss_dssp SSSSHHHHHHHHHHHHH-TTCSEEEEECBCSS-------SSSCBC-CHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTT
T ss_pred CCCCHHHHHHHHHHHHH-cCCcEEEECCCcCC-------CCCccC-CHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhc
Confidence 56678888888888874 89999988654320 133343 344444455555544 378998888864311
Q ss_pred --------CchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 452 --------DNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 452 --------~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
..+.+++=+++++++|+++|-+++.
T Consensus 158 ~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~ 190 (275)
T 2ze3_A 158 GHGATDEERLAETVRRGQAYADAGADGIFVPLA 190 (275)
T ss_dssp TCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC
T ss_pred cccccchhhHHHHHHHHHHHHHCCCCEEEECCC
Confidence 2345666667788999999887663
No 292
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=94.28 E-value=0.5 Score=46.48 Aligned_cols=147 Identities=12% Similarity=0.047 Sum_probs=73.3
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHh----hhcccCch
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCA----QLCSRDNN 503 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~----~~~~~~~~ 503 (611)
.+++.+++..+.++..-+.+. +..++....++.+.++|+|+||||+-...... .+--+++.+.. -|....+.
T Consensus 54 ~~v~~l~~~~g~~v~lD~Kl~--DipnTv~~~~~~~~~~gad~vtvh~~~G~~~l--~~~~~~~~~~g~~v~vLt~~s~~ 129 (228)
T 3m47_A 54 DIIAEFRKRFGCRIIADFKVA--DIPETNEKICRATFKAGADAIIVHGFPGADSV--RACLNVAEEMGREVFLLTEMSHP 129 (228)
T ss_dssp HHHHHHHHHHCCEEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEESTTCHHHH--HHHHHHHHHHTCEEEEECCCCSG
T ss_pred HHHHHHHhcCCCeEEEEEeec--ccHhHHHHHHHHHHhCCCCEEEEeccCCHHHH--HHHHHHHHhcCCCeEEEEeCCCc
Confidence 345556554455555554443 44455667888899999999999985422110 00000111000 01111221
Q ss_pred h--------hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCC-CcEEEecCCCCH-HHHHHHHHcCCC
Q psy9514 504 I--------IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSP-APLYGNGDILSY-EDYTESLKKSPS 573 (611)
Q Consensus 504 ~--------~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~-iPVIgnGgI~s~-eda~~~l~~G~~ 573 (611)
. ...++....++|++.+.... +. -+.++.+.+...+ .++ ..+||..- .+. +.++.|
T Consensus 130 ~~~~~~~~~~~~~a~~a~~~G~~GvV~~a-------t~---~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aG-- 195 (228)
T 3m47_A 130 GAEMFIQGAADEIARMGVDLGVKNYVGPS-------TR---PERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRF-- 195 (228)
T ss_dssp GGGTTHHHHHHHHHHHHHHTTCCEEECCS-------SC---HHHHHHHHHHHCSSSEE-EECC----------CGGGT--
T ss_pred cHHHHHHHHHHHHHHHHHHhCCcEEEECC-------CC---hHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcC--
Confidence 1 12344456677877654321 11 1233444343333 444 56676421 155 777777
Q ss_pred ccEEEEcHHhhhCCchHHH
Q psy9514 574 ISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 574 aD~VmIGRgaL~dP~lf~e 592 (611)
+|.+++||+++.-++.-..
T Consensus 196 ad~iVvGr~I~~a~dp~~a 214 (228)
T 3m47_A 196 ADAIIVGRSIYLADNPAAA 214 (228)
T ss_dssp CSEEEECHHHHTSSCHHHH
T ss_pred CCEEEECHHHhCCCCHHHH
Confidence 9999999999986654433
No 293
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=94.23 E-value=0.48 Score=46.17 Aligned_cols=133 Identities=11% Similarity=0.106 Sum_probs=75.6
Q ss_pred HHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcc---------
Q psy9514 429 VITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS--------- 499 (611)
Q Consensus 429 Iv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~--------- 499 (611)
+++.+++. +.+|..-+.++ +-.++....++.+.++|+|+||||+-.... -+..+.....
T Consensus 50 ~v~~l~~~-~~~v~lD~K~~--DI~nT~~~~v~~~~~~GaD~vTvh~~~G~~---------~l~~~~~~~~~~~~~V~~l 117 (213)
T 1vqt_A 50 IFDELAKR-NLKIILDLKFC--DIPSTVERSIKSWDHPAIIGFTVHSCAGYE---------SVERALSATDKHVFVVVKL 117 (213)
T ss_dssp HHHHHHTT-TCEEEEEEEEC--SCHHHHHHHHHHHCCTTEEEEEEEGGGCHH---------HHHHHHHHCSSEEEEECCC
T ss_pred HHHHHHHC-CCCEEEEeecc--cCchHHHHHHHHHHHCCCCEEEEeccCCHH---------HHHHHHHhcCCCeEEEEEe
Confidence 45556654 77777766654 333555667788889999999999743211 1112211110
Q ss_pred --cCc---hhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHH---H------HH
Q psy9514 500 --RDN---NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYE---D------YT 565 (611)
Q Consensus 500 --~~~---~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~e---d------a~ 565 (611)
... ......+.. .++|++ +.... ..++.+.+. .+.+ +..+||.--. | ..
T Consensus 118 ts~~~~l~~~v~~~a~~-~e~G~d-vV~~~-------------~~~~~ir~~-~~~~-~v~pGI~~~~~~~dq~rv~t~~ 180 (213)
T 1vqt_A 118 TSMEGSLEDYMDRIEKL-NKLGCD-FVLPG-------------PWAKALREK-IKGK-ILVPGIRMEVKADDQKDVVTLE 180 (213)
T ss_dssp TTSCCCHHHHHHHHHHH-HHHTCE-EECCH-------------HHHHHHTTT-CCSC-EEECCBC---------CCBCHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCE-EEEcH-------------HHHHHHHHH-CCCC-EEECCCCCCCCccchhhcCCHH
Confidence 000 222334555 778888 43211 334444333 3446 6677875322 2 46
Q ss_pred HHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 566 ESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 566 ~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
+ ++.| +|.+.+||+.+.-++..+.+
T Consensus 181 ~-i~aG--ad~iVvGR~I~~a~dP~~aa 205 (213)
T 1vqt_A 181 E-MKGI--ANFAVLGREIYLSENPREKI 205 (213)
T ss_dssp H-HTTT--CSEEEESHHHHTSSCHHHHH
T ss_pred H-HHCC--CCEEEEChhhcCCCCHHHHH
Confidence 7 7777 99999999999777644443
No 294
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=94.22 E-value=0.28 Score=50.11 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=48.1
Q ss_pred cccceEEeccCCCccceeccccccccc---cChHHHHHHHHHHHhhcCCCEEEEEEc--cccCCchHHHHHHHHHHHcCC
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLL---QRANILQSVITCMNEVSSLPITVKTRT--GIHKDNNIIHNFMPKFRDWGA 468 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl---~r~~~l~eIv~av~~~~~~PvtVKiR~--g~~~~~~~a~~la~~l~~aGv 468 (611)
.|+|.||+ +.+ +|..+. .+.+.+.+-|++|+++++ +..+|+-+ +.-.+.+...+.++...++|+
T Consensus 112 ~GAdEIDm--------Vin--ig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGA 180 (297)
T 4eiv_A 112 DGADEIEC--------LID--WRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGA 180 (297)
T ss_dssp TTCSEEEE--------ECC--THHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEe--------eee--HHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCC
Confidence 49999997 322 344444 577888888999998885 45566554 322222324567777889999
Q ss_pred CEEEEEcc
Q psy9514 469 SLITLHGR 476 (611)
Q Consensus 469 d~ItvhgR 476 (611)
|+|-.+-+
T Consensus 181 DFVKTSTG 188 (297)
T 4eiv_A 181 DFLQTSSG 188 (297)
T ss_dssp SEEECCCS
T ss_pred CEEEcCCC
Confidence 99876544
No 295
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.15 E-value=0.17 Score=53.48 Aligned_cols=98 Identities=10% Similarity=0.159 Sum_probs=64.9
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD 501 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~ 501 (611)
.++.+.+.++.+++.-..++. +-++..+ ...+.++.+.++|++.|.|+.-...
T Consensus 80 s~e~~~~~i~~vk~~~~l~vg--a~vg~~~---~~~~~~~~lieaGvd~I~idta~G~---------------------- 132 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVG--AAVGAAP---GNEERVKALVEAGVDVLLIDSSHGH---------------------- 132 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCE--EECCSCT---TCHHHHHHHHHTTCSEEEEECSCTT----------------------
T ss_pred CHHHHHHHHHHHHhcCceeEE--EEeccCh---hHHHHHHHHHhCCCCEEEEeCCCCC----------------------
Confidence 456667777777764323333 3333322 3456788899999999988532100
Q ss_pred chhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 502 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 502 ~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.....+.++++.+..+++|||+ |.+.|++++.++++.| +|+|.+|
T Consensus 133 -------------------------------~~~~~~~I~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aG--AD~I~vG 177 (366)
T 4fo4_A 133 -------------------------------SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAG--VSAVKVG 177 (366)
T ss_dssp -------------------------------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHT--CSEEEEC
T ss_pred -------------------------------CHHHHHHHHHHHHhcCCCceEe-eeeCCHHHHHHHHHcC--CCEEEEe
Confidence 0011245666666666788876 7789999999999998 9999995
No 296
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.06 E-value=0.96 Score=45.85 Aligned_cols=27 Identities=15% Similarity=0.132 Sum_probs=21.6
Q ss_pred CCCCCHHHHHHHHHcCCCEEEecCccc
Q psy9514 267 TTVGNLPFRRLCKKWGADITCSEMAVA 293 (611)
Q Consensus 267 t~~gnlpfRrl~~~~Ga~li~tEm~~~ 293 (611)
.|..+.++-+++.+.|++++.+.-.+.
T Consensus 22 ~tayDa~sA~l~e~aG~d~ilvGdSl~ 48 (275)
T 1o66_A 22 LTAYESSFAALMDDAGVEMLLVGDSLG 48 (275)
T ss_dssp EECCSHHHHHHHHHTTCCEEEECTTHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 456789999999999999998864443
No 297
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.05 E-value=0.46 Score=47.04 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=73.2
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhh
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHN 507 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~ 507 (611)
++++.+.+ .+|..-+|. ++.+.+..++++|.+.|+..|.|.-|+.
T Consensus 26 ~~~~~l~~---~~vv~Vir~---~~~~~a~~~a~al~~gGi~~iEvt~~t~----------------------------- 70 (232)
T 4e38_A 26 TINNQLKA---LKVIPVIAI---DNAEDIIPLGKVLAENGLPAAEITFRSD----------------------------- 70 (232)
T ss_dssp HHHHHHHH---HCEEEEECC---SSGGGHHHHHHHHHHTTCCEEEEETTST-----------------------------
T ss_pred HHHHHHHh---CCEEEEEEc---CCHHHHHHHHHHHHHCCCCEEEEeCCCC-----------------------------
Confidence 34444444 256656664 3456899999999999999999866542
Q ss_pred cchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 508 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 508 ~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
...+.|+++.+.+. -.+||.|-|.+.++++.+++.| +|+|+..- .+|
T Consensus 71 ---------------------------~a~e~I~~l~~~~~-~~~iGaGTVlt~~~a~~Ai~AG--A~fIvsP~---~~~ 117 (232)
T 4e38_A 71 ---------------------------AAVEAIRLLRQAQP-EMLIGAGTILNGEQALAAKEAG--ATFVVSPG---FNP 117 (232)
T ss_dssp ---------------------------THHHHHHHHHHHCT-TCEEEEECCCSHHHHHHHHHHT--CSEEECSS---CCH
T ss_pred ---------------------------CHHHHHHHHHHhCC-CCEEeECCcCCHHHHHHHHHcC--CCEEEeCC---CCH
Confidence 23466777766664 4799999999999999999998 99999762 466
Q ss_pred chHHHHHc
Q psy9514 588 WIFQEIKE 595 (611)
Q Consensus 588 ~lf~ei~~ 595 (611)
.+.+..++
T Consensus 118 ~vi~~~~~ 125 (232)
T 4e38_A 118 NTVRACQE 125 (232)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665544
No 298
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.00 E-value=0.54 Score=49.15 Aligned_cols=134 Identities=14% Similarity=0.153 Sum_probs=74.9
Q ss_pred hHHHHHHHHhhhccceeeeccCCC---------Ccc-hhhccCCCc---------ccc-------ccccceeeecc----
Q psy9514 327 VLTKCTQLLEEQMAVDFVDVNLGC---------PIE-FIYKQGSGS---------GLL-------QRANLFGVQLC---- 376 (611)
Q Consensus 327 ~~~~~a~~l~~~~~v~~idln~gc---------p~~-~~~~~~~~~---------~l~-------~~~~~~ivQi~---- 376 (611)
.+..+|+...+ .++|.|+||++| |.. ..-++.+++ +++ ..+.++++-+.
T Consensus 153 ~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~ 231 (349)
T 3hgj_A 153 AFVEGARRALR-AGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW 231 (349)
T ss_dssp HHHHHHHHHHH-TTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC
T ss_pred HHHHHHHHHHH-cCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 34566665544 689999999988 542 211222221 111 11456777666
Q ss_pred ---cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCc
Q psy9514 377 ---GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDN 453 (611)
Q Consensus 377 ---g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~ 453 (611)
|.+.+++.+.++.++ ..|+|.|++..|--..... .- ..+..-.++++.+++.+++||.+- |.-.+.
T Consensus 232 ~~~g~~~~~~~~la~~L~-~~Gvd~i~vs~g~~~~~~~-~~------~~~~~~~~~~~~ir~~~~iPVi~~---Ggi~t~ 300 (349)
T 3hgj_A 232 GEGGWSLEDTLAFARRLK-ELGVDLLDCSSGGVVLRVR-IP------LAPGFQVPFADAVRKRVGLRTGAV---GLITTP 300 (349)
T ss_dssp STTSCCHHHHHHHHHHHH-HTTCCEEEEECCCSCSSSC-CC------CCTTTTHHHHHHHHHHHCCEEEEC---SSCCCH
T ss_pred cCCCCCHHHHHHHHHHHH-HcCCCEEEEecCCcCcccc-cC------CCccccHHHHHHHHHHcCceEEEE---CCCCCH
Confidence 457888888888886 4699999998643211000 00 011122456677777778887652 211122
Q ss_pred hHHHHHHHHHHHcC-CCEEEEEccc
Q psy9514 454 NIIHNFMPKFRDWG-ASLITLHGRT 477 (611)
Q Consensus 454 ~~a~~la~~l~~aG-vd~ItvhgR~ 477 (611)
+.+..+.+.| +|+|.+ ||.
T Consensus 301 ----e~a~~~l~~G~aD~V~i-GR~ 320 (349)
T 3hgj_A 301 ----EQAETLLQAGSADLVLL-GRV 320 (349)
T ss_dssp ----HHHHHHHHTTSCSEEEE-STH
T ss_pred ----HHHHHHHHCCCceEEEe-cHH
Confidence 2344444556 998875 553
No 299
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=93.94 E-value=0.35 Score=55.48 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=73.9
Q ss_pred hhHHHHHHHHhhhccceeeeccCCC---------Cc-chhhccCCCcc---------cc-------ccccceeeecc---
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGC---------PI-EFIYKQGSGSG---------LL-------QRANLFGVQLC--- 376 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gc---------p~-~~~~~~~~~~~---------l~-------~~~~~~ivQi~--- 376 (611)
+.+..+|+...+ .++|.|+|+++| |. +..-++.+++- ++ ..+.++++-+.
T Consensus 149 ~~f~~aA~~a~~-aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 149 QFYVDAAKRSRD-AGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHH-cCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 456677766554 679999999888 53 22222222220 00 11445666664
Q ss_pred -----cCc-hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 377 -----GNN-PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 377 -----g~~-p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
|.+ .++..+.++.+++ ++|.|+++.++-.... ... .......+..-..+++.+++.+++||++- |.-
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~--~~d~~~v~~g~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~~~~~~pvi~~---G~i 300 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS--LVDMWDITIGDIAEWG-EDA-GPSRFYQQGHTIPWVKLVKQVSKKPVLGV---GRY 300 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG--GCSEEEEEECCSTTGG-GTS-CCTTTCCTTTTHHHHHHHHTTCSSCEECC---SCC
T ss_pred CcCCCCCCchHHHHHHHHHHHh--hcCEEEEeeecccccc-ccc-CCccccCccccHHHHHHHHHHCCCEEEEe---CCC
Confidence 334 5677888888864 6999999887621100 000 00000111112466788888888997653 211
Q ss_pred CCchHHHHHHHHHHHcCCCEEEE
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.+ .....+.|++.++|+|.+
T Consensus 301 ~~---~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 301 TD---PEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp CC---HHHHHHHHHTTSCSBEEE
T ss_pred CC---HHHHHHHHHCCCCCEEEe
Confidence 11 223333445555898765
No 300
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.94 E-value=0.37 Score=54.58 Aligned_cols=137 Identities=16% Similarity=0.116 Sum_probs=72.5
Q ss_pred hhHHHHHHHHhhhccceeeeccCCC---------Cc-chhhccCCCc---------ccc-------ccccceeeecc---
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGC---------PI-EFIYKQGSGS---------GLL-------QRANLFGVQLC--- 376 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gc---------p~-~~~~~~~~~~---------~l~-------~~~~~~ivQi~--- 376 (611)
+.+..+|+...+ .++|.|++|++| |. +..-++.+++ +++ ..+.++.+-+.
T Consensus 141 ~~~~~aA~~a~~-aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~ 219 (671)
T 1ps9_A 141 DNFARCAQLARE-AGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD 219 (671)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHH-cCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc
Confidence 356677766554 679999999886 42 1111222221 000 01344444333
Q ss_pred ----cCchHHHHHHHHHHHHhcccceEEeccCCCccceec-cccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC
Q psy9514 377 ----GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYK-QGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK 451 (611)
Q Consensus 377 ----g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~-~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~ 451 (611)
|.+.+++.+.++.++ ..|+|.|++..+........ ..+ ..+....+.++.+++.+++||.+- |.-.
T Consensus 220 ~~~~g~~~~~~~~~a~~l~-~~g~d~i~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~iPvi~~---Ggi~ 290 (671)
T 1ps9_A 220 LVEDGGTFAETVELAQAIE-AAGATIINTGIGWHEARIPTIATP-----VPRGAFSWVTRKLKGHVSLPLVTT---NRIN 290 (671)
T ss_dssp CSTTCCCHHHHHHHHHHHH-HHTCSEEEEEECBTTCSSCSSSTT-----SCTTTTHHHHHHHTTSCSSCEEEC---SSCC
T ss_pred cCCCCCCHHHHHHHHHHHH-hcCCCEEEcCCCcccccccccccc-----CCcchHHHHHHHHHHhcCceEEEe---CCCC
Confidence 567788888888886 46999999875432100000 000 001122456788888888998652 3211
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
+ .....+.|++.++|+|.+ ||
T Consensus 291 ~---~~~a~~~l~~g~aD~V~~-gR 311 (671)
T 1ps9_A 291 D---PQVADDILSRGDADMVSM-AR 311 (671)
T ss_dssp S---HHHHHHHHHTTSCSEEEE-ST
T ss_pred C---HHHHHHHHHcCCCCEEEe-CH
Confidence 1 222333344444998865 44
No 301
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.90 E-value=0.54 Score=46.35 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=37.5
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
.+++|+..|+|.+.++...+...| +||+.||.++|.-+++...++
T Consensus 175 ~~~~ilyggsV~~~n~~~~~~~~~--vDG~LVG~a~l~a~~~~~~i~ 219 (225)
T 1hg3_A 175 PEVKVLCGAGISTGEDVKKAIELG--TVGVLLASGVTKAKDPEKAIW 219 (225)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTCSSHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHhCC--CCEEEeCHHHHCCcCHHHHHH
Confidence 368999999999999999998876 999999988887666554443
No 302
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.86 E-value=0.019 Score=46.12 Aligned_cols=23 Identities=30% Similarity=0.813 Sum_probs=20.2
Q ss_pred CCCCcceeccccCCCCCccccCcc
Q psy9514 113 SEQCYVFLQHGYCPMGIACRFGSS 136 (611)
Q Consensus 113 ~~~C~~~~~~G~C~~G~~Crf~~~ 136 (611)
-..|..| ..|.||||.+|+|+++
T Consensus 20 ~~LC~~~-~~G~C~~G~~C~FAHG 42 (69)
T 2d9m_A 20 FSICDRY-MNGTCPEGNSCKFAHG 42 (69)
T ss_dssp CSBCHHH-HHSCCSSCSSCSSBSS
T ss_pred cccCccc-CcCCCCCCCccCCcCC
Confidence 3799999 7899999999999943
No 303
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=93.82 E-value=0.5 Score=46.91 Aligned_cols=49 Identities=12% Similarity=-0.001 Sum_probs=34.1
Q ss_pred HHHHHhhCCCCcEEEecCCCCH-H---------HHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 540 IEKCAQLCSPAPLYGNGDILSY-E---------DYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 540 i~~~~k~~~~iPVIgnGgI~s~-e---------da~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
++++.+.....+++..|||..- . .+.++++.| +|.+.+||+++..++.-
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aG--ad~iVvGr~I~~a~dp~ 225 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALG--SDYIVIGRSLTRAADPL 225 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHT--CSEEEECHHHHTSSSHH
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcC--CCEEEECHhhcCCCCHH
Confidence 5555444434568899999732 0 366777887 99999999999866543
No 304
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.82 E-value=0.41 Score=45.58 Aligned_cols=132 Identities=11% Similarity=0.059 Sum_probs=86.0
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCc------hhhhhcchhh
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDN------NIIHNFMPKF 512 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~------~~~~~~~~~l 512 (611)
.|+.+-+|.. +.+.+.++++.+.+.|+++|.+|.++.. ....|..+.+..+... ....+.+...
T Consensus 10 ~~~i~~~~~~---~~~~~~~~~~~~~~~G~~~iev~~~~~~-------~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a 79 (205)
T 1wa3_A 10 HKIVAVLRAN---SVEEAKEKALAVFEGGVHLIEITFTVPD-------ADTVIKELSFLKEKGAIIGAGTVTSVEQCRKA 79 (205)
T ss_dssp HCEEEEECCS---SHHHHHHHHHHHHHTTCCEEEEETTSTT-------HHHHHHHTHHHHHTTCEEEEESCCSHHHHHHH
T ss_pred CCEEEEEecC---CHHHHHHHHHHHHHCCCCEEEEeCCChh-------HHHHHHHHHHHCCCCcEEEecccCCHHHHHHH
Confidence 4777777743 4467889999999999999999987632 1233555555443111 0122334566
Q ss_pred HhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHH
Q psy9514 513 RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 513 ~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~e 592 (611)
.+.|++.+ ++.. +. -+.+.. ++. .++|++. ++.|++++.+.++.| +|.|.+--+-...+..+.+
T Consensus 80 ~~~Gad~i-v~~~-----~~----~~~~~~-~~~-~g~~vi~--g~~t~~e~~~a~~~G--ad~vk~~~~~~~g~~~~~~ 143 (205)
T 1wa3_A 80 VESGAEFI-VSPH-----LD----EEISQF-CKE-KGVFYMP--GVMTPTELVKAMKLG--HTILKLFPGEVVGPQFVKA 143 (205)
T ss_dssp HHHTCSEE-ECSS-----CC----HHHHHH-HHH-HTCEEEC--EECSHHHHHHHHHTT--CCEEEETTHHHHHHHHHHH
T ss_pred HHcCCCEE-EcCC-----CC----HHHHHH-HHH-cCCcEEC--CcCCHHHHHHHHHcC--CCEEEEcCccccCHHHHHH
Confidence 77999999 5432 11 233333 343 3789987 678999999999987 9999875433445667777
Q ss_pred HHcc
Q psy9514 593 IKEK 596 (611)
Q Consensus 593 i~~g 596 (611)
+.+.
T Consensus 144 l~~~ 147 (205)
T 1wa3_A 144 MKGP 147 (205)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 7653
No 305
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=93.49 E-value=0.77 Score=45.29 Aligned_cols=50 Identities=22% Similarity=0.119 Sum_probs=34.3
Q ss_pred HHHHHhhCCCCcEEEecCCCCHHH----------HHHHHHcCCCccEEEEcHHhhhCCchHH
Q psy9514 540 IEKCAQLCSPAPLYGNGDILSYED----------YTESLKKSPSISGVMIGRGALIKPWIFQ 591 (611)
Q Consensus 540 i~~~~k~~~~iPVIgnGgI~s~ed----------a~~~l~~G~~aD~VmIGRgaL~dP~lf~ 591 (611)
++++.+...+.+++..|||..-.. ..++++.| +|.+.+||+++..|+.-+
T Consensus 166 i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aG--ad~iVvGr~I~~a~dp~~ 225 (239)
T 1dbt_A 166 AKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKG--SSAIVVGRSITKAEDPVK 225 (239)
T ss_dssp HHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTT--CSEEEECHHHHTSSCHHH
T ss_pred HHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcC--CCEEEEChhhcCCCCHHH
Confidence 344433333467899999974322 26677887 999999999998666433
No 306
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=93.47 E-value=2.8 Score=43.17 Aligned_cols=94 Identities=15% Similarity=0.072 Sum_probs=57.2
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCC-Cccceeccc-cccccccChHHHHHHHHHHHhh--cCCCEEEEEEcccc--CC
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQG-SGSGLLQRANILQSVITCMNEV--SSLPITVKTRTGIH--KD 452 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g-~GsaLl~r~~~l~eIv~av~~~--~~~PvtVKiR~g~~--~~ 452 (611)
++..+.+.++.+.+ +|+.+|-|--.- | .+... .|..|....+.+.+|-.+.... .+.++.|--|+-.. ..
T Consensus 101 ~~~~v~~~v~~l~~-aGaagv~iEDq~~~---k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 176 (307)
T 3lye_A 101 GPIMVARTVEHYIR-SGVAGAHLEDQILT---KRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLG 176 (307)
T ss_dssp SHHHHHHHHHHHHH-TTCCEEEECCBCCC---C--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHC
T ss_pred CHHHHHHHHHHHHH-cCCeEEEEcCCCCC---cccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccC
Confidence 47777777777764 699999885433 2 11111 2334544445555554444332 37888888887432 23
Q ss_pred chHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
.+++++=++++.++|+|.|-+++.
T Consensus 177 ldeAi~Ra~ay~eAGAD~ifi~~~ 200 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGLLEGF 200 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCEEEecCC
Confidence 456777777889999999988874
No 307
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.21 E-value=0.62 Score=47.00 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=21.2
Q ss_pred CCCCCHHHHHHHHHcCCCEEEecCcc
Q psy9514 267 TTVGNLPFRRLCKKWGADITCSEMAV 292 (611)
Q Consensus 267 t~~gnlpfRrl~~~~Ga~li~tEm~~ 292 (611)
.|..+.++-+++.+.|++++++.-.+
T Consensus 22 ~tayD~~sA~l~e~aG~d~ilvGdsl 47 (264)
T 1m3u_A 22 ITAYDYSFAKLFADEGLNVMLVGDSL 47 (264)
T ss_dssp EECCSHHHHHHHHHHTCCEEEECTTH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHH
Confidence 45678999999999999999996433
No 308
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=93.11 E-value=0.63 Score=45.92 Aligned_cols=44 Identities=18% Similarity=0.250 Sum_probs=36.9
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.+++|+..|+|++.++...+...| +||+.||.++|.-+++...+
T Consensus 172 ~~~~ilyggsV~~~n~~~~~~~~g--iDG~LVG~a~l~a~~~~~~i 215 (226)
T 1w0m_A 172 PEVSVITGAGIESGDDVAAALRLG--TRGVLLASAAVKAKDPYAKI 215 (226)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTCSSHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHhCC--CCEEEECHHHHCCcCHHHHH
Confidence 368999999999999999998876 99999998888766654443
No 309
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.08 E-value=0.98 Score=45.92 Aligned_cols=27 Identities=15% Similarity=0.078 Sum_probs=21.6
Q ss_pred CCCCCHHHHHHHHHcCCCEEEecCccc
Q psy9514 267 TTVGNLPFRRLCKKWGADITCSEMAVA 293 (611)
Q Consensus 267 t~~gnlpfRrl~~~~Ga~li~tEm~~~ 293 (611)
.|..+.++=+++.+.|++++.+.-.+.
T Consensus 39 ~tayDa~sA~l~e~aG~d~ilvGdSl~ 65 (281)
T 1oy0_A 39 LTAYDYSTARIFDEAGIPVLLVGDSAA 65 (281)
T ss_dssp EECCSHHHHHHHHTTTCCEEEECTTHH
T ss_pred EeCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 456789999999999999998864443
No 310
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.06 E-value=0.76 Score=45.98 Aligned_cols=53 Identities=9% Similarity=-0.043 Sum_probs=42.6
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
..+++..+.+. +++||+.-+.|.+..++++++..| ||+|.++-.+|. ..+.++
T Consensus 94 ~~~~l~~i~~~-v~lPvl~kdfI~d~~qi~~a~~~G--AD~VlL~~~~l~--~~l~~l 146 (254)
T 1vc4_A 94 SLLDLKRVREA-VDLPLLRKDFVVDPFMLEEARAFG--ASAALLIVALLG--ELTGAY 146 (254)
T ss_dssp CHHHHHHHHHH-CCSCEEEESCCCSHHHHHHHHHTT--CSEEEEEHHHHG--GGHHHH
T ss_pred CHHHHHHHHHh-cCCCEEECCcCCCHHHHHHHHHcC--CCEEEECccchH--HHHHHH
Confidence 44566666554 599999999999999999999987 999999999887 444444
No 311
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=93.03 E-value=0.97 Score=48.93 Aligned_cols=123 Identities=8% Similarity=0.150 Sum_probs=82.9
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a 456 (611)
.+++.+++.|+.+.+..||..|-|..|-. +++.-.+.|++|++++ ++++.|-.--++ +.+++
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w--~~~~A 252 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAW--TVETS 252 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCB--CHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCC--CHHHH
Confidence 57888888777765445999988875532 2344456788888887 234444322223 34678
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
..+++.|++. +.+|- | +..+
T Consensus 253 i~~~~~L~~~-l~~iE-------e----------------------------------------------------P~~d 272 (445)
T 3va8_A 253 KWVAKELEGI-VEYLE-------D----------------------------------------------------PAGE 272 (445)
T ss_dssp HHHHHHTTTT-CSEEE-------S----------------------------------------------------CBSH
T ss_pred HHHHHHHhhh-cCeEe-------e----------------------------------------------------cCcC
Confidence 8888888776 55432 1 1124
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
++.++++.+. .++||.+.-.+.++.++.++++.+ .+|.|++
T Consensus 273 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~div~~ 313 (445)
T 3va8_A 273 IEGMAAVAKE-ASMPLATNMAVVAFDHLPPSILQD-AVQVILS 313 (445)
T ss_dssp HHHHHHHHTT-CSSCEEESSSCCSGGGHHHHHHTT-CCSEEEE
T ss_pred HHHHHHHHHc-CCCCEEeCCccCCHHHHHHHHHcC-CCCEEEe
Confidence 5566666554 579998888899999999999887 7888887
No 312
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=92.97 E-value=1.3 Score=44.39 Aligned_cols=155 Identities=15% Similarity=0.055 Sum_probs=84.9
Q ss_pred CCCCCCHHHHHHHHHcCCCEEEecCc-ccchhhcCChhhhHhHhhccCCCeEEEEecCCChhhHHHHHHHHhhhccceee
Q psy9514 266 LTTVGNLPFRRLCKKWGADITCSEMA-VATELLKSSPQEWALIKRHESEDLFGVQLCGNNPYVLTKCTQLLEEQMAVDFV 344 (611)
Q Consensus 266 Mt~~gnlpfRrl~~~~Ga~li~tEm~-~~~~l~~g~~~e~~l~~~h~~e~~~~vQi~g~~p~~~~~~a~~l~~~~~v~~i 344 (611)
|.+..+.++=+++.+.|++.+++--. ++. ..|.+. ..++ ..+.+...++.+.....
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai~vg~~s~a~--~~G~pD----------~~~v-------t~~em~~~~~~I~r~~~---- 80 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGLTIGSHPVAD--ATGSSD----------GENM-------NFADYMAVVKKITSAVS---- 80 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCEEECHHHHHH--HTTCCT----------TTCS-------CHHHHHHHHHHHHHHCS----
T ss_pred EecCcCHHHHHHHHHcCCCEEEEChHHHHH--hCCCCC----------CCCc-------CHHHHHHHHHHHHhcCC----
Confidence 34667889999999999999888742 332 234331 1010 02333333344433111
Q ss_pred eccCCCCcchhhccCCCccccccccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChH
Q psy9514 345 DVNLGCPIEFIYKQGSGSGLLQRANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRAN 424 (611)
Q Consensus 345 dln~gcp~~~~~~~~~~~~l~~~~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~ 424 (611)
.| . .-|.+++ +|+++ .+.+.++.+ +|+.+|-|--+-. .-|..|. ..+
T Consensus 81 -----~p--v-----------iaD~~~G---yg~~~---~~~~~~l~~-aGa~gv~iEd~~~-------~~~k~l~-~~~ 127 (255)
T 2qiw_A 81 -----IP--V-----------SVDVESG---YGLSP---ADLIAQILE-AGAVGINVEDVVH-------SEGKRVR-EAQ 127 (255)
T ss_dssp -----SC--E-----------EEECTTC---TTCCH---HHHHHHHHH-TTCCEEEECSEEG-------GGTTEEC-CHH
T ss_pred -----CC--E-----------EeccCCC---cCcHH---HHHHHHHHH-cCCcEEEECCCCC-------CCCCccc-CHH
Confidence 11 1 1123333 44555 444555543 7999998864421 0122232 334
Q ss_pred HHHHHHHHHHhh---cCCCEEEEEEcccc--------CCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 425 ILQSVITCMNEV---SSLPITVKTRTGIH--------KDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 425 ~l~eIv~av~~~---~~~PvtVKiR~g~~--------~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
...+-|++++++ .|+|+.|--|+... +..+.+++=+++++++|++.|-+.+-
T Consensus 128 e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~ 190 (255)
T 2qiw_A 128 EHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL 190 (255)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 445555555554 27898887787531 12345666677788999999888763
No 313
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=92.92 E-value=3.3 Score=40.96 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=32.9
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
++++.+++. +.+|..-+..+ +-.++....++.+.++|+|++|||+-
T Consensus 50 ~~v~~L~~~-g~~iflDlK~~--DI~nTv~~~~~~~~~~gad~vTvh~~ 95 (239)
T 3tr2_A 50 AFVEELMQK-GYRIFLDLKFY--DIPQTVAGACRAVAELGVWMMNIHIS 95 (239)
T ss_dssp HHHHHHHHT-TCCEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEEGG
T ss_pred HHHHHHHhc-CCCEEEEeccc--ccchHHHHHHHHHHhCCCCEEEEecc
Confidence 456666653 77887777654 33345555778899999999999984
No 314
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.84 E-value=0.2 Score=55.08 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=34.4
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
++.++++.+..+++||++ |++.|.+++..+++.| +|+|.+|
T Consensus 258 ~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aG--aD~I~vg 298 (490)
T 4avf_A 258 IERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAG--ADAVKVG 298 (490)
T ss_dssp HHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTT--CSEEEEC
T ss_pred HHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcC--CCEEEEC
Confidence 466777777666788887 8899999999999987 9999985
No 315
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=92.81 E-value=2 Score=43.09 Aligned_cols=47 Identities=6% Similarity=0.145 Sum_probs=33.6
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
++++.+++. +.+|..-+.++ |-.++....++.+.++|+|++|||+-.
T Consensus 69 ~~v~~Lk~~-g~~VflDlK~~--DIpnTv~~a~~~~~~~gaD~vTVh~~~ 115 (255)
T 3ldv_A 69 DFVRELHKR-GFSVFLDLKFH--DIPNTCSKAVKAAAELGVWMVNVHASG 115 (255)
T ss_dssp HHHHHHHHT-TCCEEEEEEEC--SCHHHHHHHHHHHHHTTCSEEEEEGGG
T ss_pred HHHHHHHhc-CCCEEEEEecc--cchhHHHHHHHHHHhcCCCEEEEeccC
Confidence 466666654 78888777764 333444556778899999999999753
No 316
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=92.70 E-value=1.1 Score=48.42 Aligned_cols=123 Identities=10% Similarity=0.157 Sum_probs=82.4
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a 456 (611)
.+++.+++.|+.+.+..||..|-|..|-. +++.-.+.|++|++++ ++++.|-.--++ +.+++
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w--~~~~A 254 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAW--TPQTS 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCS--CHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCC--CHHHH
Confidence 57888888877765445999988875431 2344456788888887 234444322233 34678
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
..+++.|++. +.+|- | +..+
T Consensus 255 i~~~~~L~~~-l~~iE-------e----------------------------------------------------P~~~ 274 (445)
T 3vdg_A 255 VKVAAGLEGV-LEYLE-------D----------------------------------------------------PTPG 274 (445)
T ss_dssp HHHHHHTTTT-CSEEE-------C----------------------------------------------------CSSS
T ss_pred HHHHHHHhhH-HHeee-------C----------------------------------------------------CCCC
Confidence 8888888776 55432 1 1124
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
++.++++.+. .++||.+.-.+.++.++.++++.+ .+|.|++
T Consensus 275 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-a~div~~ 315 (445)
T 3vdg_A 275 LDGMAEVAAQ-APMPLATNMCVVAFDQLPAAVAKN-SVQVVLS 315 (445)
T ss_dssp HHHHHHHHHH-CSSCEEESSSCCSGGGHHHHHHHT-CCSEEEE
T ss_pred HHHHHHHHhc-CCCCEEcCCcCCCHHHHHHHHHcC-CCCEEee
Confidence 5566666555 478988888888999999988887 7888887
No 317
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=92.52 E-value=1.4 Score=46.35 Aligned_cols=122 Identities=15% Similarity=0.095 Sum_probs=70.4
Q ss_pred hHHHHHHHHhhhccceeeeccCCC---------Cc-chhhccCCCc---------cccc---c---ccceeeecccCc--
Q psy9514 327 VLTKCTQLLEEQMAVDFVDVNLGC---------PI-EFIYKQGSGS---------GLLQ---R---ANLFGVQLCGNN-- 379 (611)
Q Consensus 327 ~~~~~a~~l~~~~~v~~idln~gc---------p~-~~~~~~~~~~---------~l~~---~---~~~~ivQi~g~~-- 379 (611)
.+..+|+...+ .++|.|+|+++| |. +..-++.+++ +++. + +.++++-+.+.+
T Consensus 154 ~f~~AA~~a~~-aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~ 232 (362)
T 4ab4_A 154 AYRSGAENAKA-AGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA 232 (362)
T ss_dssp HHHHHHHHHHH-TTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHH-cCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc
Confidence 34556655544 689999999887 53 2322322322 0110 0 126777776542
Q ss_pred --------hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC
Q psy9514 380 --------PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK 451 (611)
Q Consensus 380 --------p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~ 451 (611)
.+.+...++.++ ..|+|.|++..+. .|. .+++.+++.+++||++- |.-
T Consensus 233 ~g~~~~~~~~~~~~la~~l~-~~Gvd~i~v~~~~---------~~~----------~~~~~ik~~~~iPvi~~---Ggi- 288 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELG-KRGIAFICSRERE---------ADD----------SIGPLIKEAFGGPYIVN---ERF- 288 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHH-HTTCSEEEEECCC---------CTT----------CCHHHHHHHHCSCEEEE---SSC-
T ss_pred cccCCCCcHHHHHHHHHHHH-HhCCCEEEECCCC---------CCH----------HHHHHHHHHCCCCEEEe---CCC-
Confidence 456778888875 4699999998653 121 24567777778887664 221
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
+ .....+.|++.++|+|.+ ||.
T Consensus 289 t---~e~a~~~l~~g~aD~V~i-GR~ 310 (362)
T 4ab4_A 289 D---KASANAALASGKADAVAF-GVP 310 (362)
T ss_dssp C---HHHHHHHHHTTSCSEEEE-SHH
T ss_pred C---HHHHHHHHHcCCccEEEE-CHH
Confidence 2 222333444555998765 553
No 318
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=92.51 E-value=1.4 Score=46.38 Aligned_cols=85 Identities=5% Similarity=0.010 Sum_probs=53.4
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEE--
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKT-- 445 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKi-- 445 (611)
.++...+.+.+++.+.+.++.+.+ .||..+-|..|. .+++.-.+.|+++++.+| ..+.+.+
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~-~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDa 215 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLA-EGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDA 215 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHH-TTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEEC
T ss_pred EEEeEEecCCCHHHHHHHHHHHHH-HhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 344445556678877766665542 488888876442 145666788888888886 4443322
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
--++ +.+++.++++.|++.++.+|
T Consensus 216 N~~~--~~~~a~~~~~~l~~~~i~~i 239 (377)
T 2pge_A 216 NGAF--SPANAPQRLKRLSQFHLHSI 239 (377)
T ss_dssp TTBB--CTTTHHHHHHHHHTTCCSEE
T ss_pred CCCC--CHHHHHHHHHHHhcCCCcEE
Confidence 2223 34668888999998887664
No 319
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=92.39 E-value=1.4 Score=46.24 Aligned_cols=111 Identities=9% Similarity=0.049 Sum_probs=76.0
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.||..+-+..|- +++.-.+.|+++++++|..+.+.+=....=+..++.++++.|++.++.+|-
T Consensus 158 ~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE- 220 (378)
T 4hpn_A 158 EGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFGIDWFE- 220 (378)
T ss_dssp TTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGCCSCEE-
T ss_pred hccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhcccchhh-
Confidence 488887776542 234446778899988865544333222212446788899999888776542
Q ss_pred EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEE
Q psy9514 474 HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLY 553 (611)
Q Consensus 474 hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVI 553 (611)
| -..+.+++.++++.+. .++||.
T Consensus 221 ------e--------------------------------------------------P~~~~d~~~~~~l~~~-~~ipIa 243 (378)
T 4hpn_A 221 ------E--------------------------------------------------PVVPEQLDAYARVRAG-QPIPVA 243 (378)
T ss_dssp ------C--------------------------------------------------CSCTTCHHHHHHHHHH-SSSCEE
T ss_pred ------c--------------------------------------------------CCCccchhhhHHHHhh-CCceee
Confidence 1 1233466777777665 489999
Q ss_pred EecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 554 GNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 554 gnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+-=.+++..++.++++.+ .+|.|++
T Consensus 244 ~dE~~~~~~~~~~~i~~~-a~d~i~~ 268 (378)
T 4hpn_A 244 GGETWHGRYGMWQALSAG-AVDILQP 268 (378)
T ss_dssp ECTTCCHHHHHHHHHHTT-CCSEECC
T ss_pred CCcCccchHhHHHHHHcC-CCCEEee
Confidence 888899999999999987 7898875
No 320
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.31 E-value=1.6 Score=46.01 Aligned_cols=121 Identities=13% Similarity=0.124 Sum_probs=69.5
Q ss_pred HHHHHHHHhhhccceeeeccCCC---------Cc-chhhccCCCc---------cccc---c---ccceeeecccCc---
Q psy9514 328 LTKCTQLLEEQMAVDFVDVNLGC---------PI-EFIYKQGSGS---------GLLQ---R---ANLFGVQLCGNN--- 379 (611)
Q Consensus 328 ~~~~a~~l~~~~~v~~idln~gc---------p~-~~~~~~~~~~---------~l~~---~---~~~~ivQi~g~~--- 379 (611)
+..+|+...+ .++|.|+|+++| |. +..-+..+++ +++. + +.++++-+...+
T Consensus 163 f~~AA~~A~~-aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~ 241 (361)
T 3gka_A 163 FRRGAENARA-AGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAH 241 (361)
T ss_dssp HHHHHHHHHH-TTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHHH-cCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccC
Confidence 4566655543 689999999887 53 2222322222 1110 0 126777666542
Q ss_pred -------hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCC
Q psy9514 380 -------PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKD 452 (611)
Q Consensus 380 -------p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~ 452 (611)
.+++...++.++ ..|+|.|++..+. .|. .+++.+++.+++||++- |.- +
T Consensus 242 g~~~~~~~~~~~~la~~l~-~~Gvd~i~v~~~~---------~~~----------~~~~~ik~~~~iPvi~~---Ggi-t 297 (361)
T 3gka_A 242 TMGDSDPAATFGHVARELG-RRRIAFLFARESF---------GGD----------AIGQQLKAAFGGPFIVN---ENF-T 297 (361)
T ss_dssp SCCCSCHHHHHHHHHHHHH-HTTCSEEEEECCC---------STT----------CCHHHHHHHHCSCEEEE---SSC-C
T ss_pred CCCCCCcHHHHHHHHHHHH-HcCCCEEEECCCC---------CCH----------HHHHHHHHHcCCCEEEe---CCC-C
Confidence 456788888886 4699999997653 121 34567777778887664 221 2
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
.....+.|++.++|+|.+ ||.
T Consensus 298 ---~e~a~~~l~~G~aD~V~i-GR~ 318 (361)
T 3gka_A 298 ---LDSAQAALDAGQADAVAW-GKL 318 (361)
T ss_dssp ---HHHHHHHHHTTSCSEEEE-SHH
T ss_pred ---HHHHHHHHHcCCccEEEE-CHH
Confidence 122233344445998765 553
No 321
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=92.30 E-value=1.1 Score=45.88 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=56.6
Q ss_pred hcccceEEeccC-CCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 393 QMVVDFVDVNLG-CPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 393 ~~g~D~IELN~g-CP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.+|||+|=+-.+ .- ....|+-....-..+-+...++.|.+.++.||++-+=.|+..+...+.+.+++++++|+++|
T Consensus 35 ~aG~~ai~vs~~~~a---~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv 111 (295)
T 1xg4_A 35 RAGYQAIYLSGGGVA---AGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGL 111 (295)
T ss_dssp HTTCSCEEECHHHHH---HTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEE
T ss_pred HcCCCEEEECchHhh---hhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEE
Confidence 458888766322 11 01123322233445566777777888888999999888855466778899999999999999
Q ss_pred EEEccc
Q psy9514 472 TLHGRT 477 (611)
Q Consensus 472 tvhgR~ 477 (611)
+|-+..
T Consensus 112 ~iEd~~ 117 (295)
T 1xg4_A 112 HIEDQV 117 (295)
T ss_dssp EEECBC
T ss_pred EECCCC
Confidence 998765
No 322
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=92.20 E-value=0.34 Score=49.18 Aligned_cols=50 Identities=8% Similarity=0.042 Sum_probs=41.0
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
..+++..+.+ .+++||+-.+-|.++.+++++...| ||+|.++-.+|.+..
T Consensus 108 s~~~L~~ir~-~v~lPVl~Kdfi~d~~qi~ea~~~G--AD~VlLi~a~L~~~~ 157 (272)
T 3tsm_A 108 APEFLTAARQ-ACSLPALRKDFLFDPYQVYEARSWG--ADCILIIMASVDDDL 157 (272)
T ss_dssp CHHHHHHHHH-TSSSCEEEESCCCSTHHHHHHHHTT--CSEEEEETTTSCHHH
T ss_pred CHHHHHHHHH-hcCCCEEECCccCCHHHHHHHHHcC--CCEEEEcccccCHHH
Confidence 5567777655 4699999999999999999999987 999999988885433
No 323
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=92.05 E-value=1.3 Score=46.82 Aligned_cols=120 Identities=10% Similarity=0.109 Sum_probs=75.2
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC--CchH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK--DNNI 455 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~--~~~~ 455 (611)
.+++.+.+.++.+.+ .||..|-|..+ | ..+ .+.+++|++++ | .+++++-... +.++
T Consensus 160 ~~~e~~~~~a~~~~~-~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~--~-~~~l~vDaN~~~~~~~ 217 (393)
T 1wuf_A 160 QNVETLLQLVNQYVD-QGYERVKLKIA-P-------------NKD----IQFVEAVRKSF--P-KLSLMADANSAYNRED 217 (393)
T ss_dssp SCHHHHHHHHHHHHH-HTCCEEEEECB-T-------------TBS----HHHHHHHHTTC--T-TSEEEEECTTCCCGGG
T ss_pred CCHHHHHHHHHHHHH-HhhHhheeccC-h-------------HHH----HHHHHHHHHHc--C-CCEEEEECCCCCCHHH
Confidence 457777666665532 48999888653 2 111 35578888876 2 2344432211 2345
Q ss_pred HHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc
Q psy9514 456 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA 535 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a 535 (611)
+ .+++.|++.++.+|- | ...+.
T Consensus 218 a-~~~~~l~~~~i~~iE-------q--------------------------------------------------P~~~~ 239 (393)
T 1wuf_A 218 F-LLLKELDQYDLEMIE-------Q--------------------------------------------------PFGTK 239 (393)
T ss_dssp H-HHHHTTGGGTCSEEE-------C--------------------------------------------------CSCSS
T ss_pred H-HHHHHHHhCCCeEEE-------C--------------------------------------------------CCCCc
Confidence 6 777777777776553 1 12233
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+++.++++.+. .++||.+.-.++++.++.++++.+ .+|.|++
T Consensus 240 d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-a~d~v~i 281 (393)
T 1wuf_A 240 DFVDHAWLQKQ-LKTRICLDENIRSVKDVEQAHSIG-SCRAINL 281 (393)
T ss_dssp CSHHHHHHHTT-CSSEEEECTTCCSHHHHHHHHHHT-CCSEEEE
T ss_pred CHHHHHHHHHh-CCCCEEECCCcCCHHHHHHHHHhC-CCCEEEe
Confidence 55666666554 478888888888888888888877 6788876
No 324
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=92.03 E-value=2.4 Score=42.52 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=32.8
Q ss_pred HHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 428 SVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 428 eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
++++.+++. +.+|..-+.++ |-.++....++.+.++|+|++|||+-
T Consensus 47 ~~v~~Lk~~-g~~VflDlK~~--DIpnTv~~a~~~~~~~gad~vTVh~~ 92 (259)
T 3tfx_A 47 DVIKKLTQQ-GYKIFLDLKMH--DIPNTVYNGAKALAKLGITFTTVHAL 92 (259)
T ss_dssp HHHHHHHHT-TCEEEEEEEEC--SCHHHHHHHHHHHHTTTCSEEEEEGG
T ss_pred HHHHHHHHC-CCcEEEEeccc--ccchHHHHHHHHHHhcCCCEEEEcCC
Confidence 345555553 78888777764 33345556677888999999999984
No 325
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=91.92 E-value=0.056 Score=46.51 Aligned_cols=25 Identities=32% Similarity=0.790 Sum_probs=20.9
Q ss_pred ccCCcccccCCCCCCCCCCCCCCCcCCh
Q psy9514 74 DCYCPFLKDSTLEQTCKYGEKCKFVHDK 101 (611)
Q Consensus 74 ~~lC~~~~~~~~~~~C~~g~~C~f~Hd~ 101 (611)
..+|..|... +.|+||++|+|+|+.
T Consensus 36 ~~~C~~f~~~---G~C~~G~~C~f~H~~ 60 (98)
T 2cqe_A 36 DFPCKLYHTT---GNCINGDDCMFSHDP 60 (98)
T ss_dssp SSBCSHHHHT---SCCSSCTTCSSBCCC
T ss_pred CCcCcCcccC---CcCCCCCCCcccCCC
Confidence 6789999644 469999999999973
No 326
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=91.89 E-value=0.3 Score=53.72 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=34.8
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
++.++++.+..+++||++ |.+.+.+++..+++.| +|+|.+|
T Consensus 260 ~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aG--aD~I~Vg 300 (496)
T 4fxs_A 260 LQRIRETRAAYPHLEIIG-GNVATAEGARALIEAG--VSAVKVG 300 (496)
T ss_dssp HHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHT--CSEEEEC
T ss_pred HHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhC--CCEEEEC
Confidence 466777777766889987 8899999999999998 9999986
No 327
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=91.84 E-value=1.3 Score=46.76 Aligned_cols=128 Identities=9% Similarity=0.040 Sum_probs=81.5
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~ 457 (611)
..++.+.+.++.+. ..||..+-|..+-. ++..-.+.++++++++|..+.+.+=....=+...+.
T Consensus 163 ~~~~~~~~~~~~~~-~~G~~~~Kikvg~~---------------~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~ 226 (388)
T 4h83_A 163 EPLGSIADEMHNYQ-ELGLAGVKFKVGGL---------------SAAEDAARITAAREAAGDDFIICIDANQGYKPAVAV 226 (388)
T ss_dssp CTTCSHHHHHHHHH-HHTBSEEEEECSSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHH
T ss_pred CCHHHHHHHHHHHH-HcCCceEeecCCCC---------------CHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHH
Confidence 34455555555443 34888888765322 223335667888888865544433222212446788
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 537 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~ 537 (611)
++++.|++.++.+|- |- .....++
T Consensus 227 ~~~~~l~~~~~~~iE-------eP-------------------------------------------------~~~~~d~ 250 (388)
T 4h83_A 227 DLSRRIADLNIRWFE-------EP-------------------------------------------------VEWHNDK 250 (388)
T ss_dssp HHHHHTTTSCCCCEE-------SC-------------------------------------------------BCSTTHH
T ss_pred HHHHHhhhcCcceee-------cC-------------------------------------------------cccccch
Confidence 888888887766542 11 1112245
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
..++++.+. .++||.+-=.++|..++.++++.+ .+|.|++
T Consensus 251 ~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-a~d~i~~ 290 (388)
T 4h83_A 251 RSMRDVRYQ-GSVPVCAGQTEFSASGCRDLMETG-AIDVCNF 290 (388)
T ss_dssp HHHHHHHHH-SSSCEEECTTCSSHHHHHHHHHHT-CCSEECC
T ss_pred HHHHHHHhh-cCCCccCCccccChHhHHHHHHcC-CCCeEee
Confidence 566666554 589999888999999999999987 7999876
No 328
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=91.83 E-value=4.7 Score=42.01 Aligned_cols=129 Identities=10% Similarity=0.162 Sum_probs=85.6
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHH
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a 456 (611)
+..++.+.+.++.+. ..||..+-+..|-. ++..-.+.++++++.++..+.+.+=....=+.+.+
T Consensus 141 ~~~~~~~~~~~~~~~-~~g~~~~K~Kvg~~---------------~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~~~~A 204 (370)
T 2chr_A 141 GDTKRDLDSAVEMIE-RRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVA 204 (370)
T ss_dssp SCHHHHHHHHHHHHH-TTSCCEEEEECSSS---------------CHHHHHHHHHHHHHHTTTTSEEEEECTTCCCTHHH
T ss_pred CchhhhHHHHHHHHh-hcccceeecccccC---------------ChHHHHHHHHHHHHhcCCCcEEEecCCCCCCHHHH
Confidence 345666666666654 34777776654422 34444566788888886554333322222245778
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
..+++.|++.++.+|- | ...+.+
T Consensus 205 ~~~~~~l~~~~~~~iE-------e--------------------------------------------------P~~~~d 227 (370)
T 2chr_A 205 SVYIPELEALGVELIE-------Q--------------------------------------------------PVGREN 227 (370)
T ss_dssp HHHHHHHHTTTCCEEE-------C--------------------------------------------------CSCSSC
T ss_pred HHHHHHHHhcCCceec-------C--------------------------------------------------CCChhh
Confidence 8999999988877642 1 123346
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
++.++++.+. .++||.+.=.+++..++.++++.+ .+|.|++=
T Consensus 228 ~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~-a~d~i~~d 269 (370)
T 2chr_A 228 TQALRRLSDN-NRVAIMADESLSTLASAFDLARDR-SVDVFSLK 269 (370)
T ss_dssp HHHHHHHHHH-CSSEEEESSSCCSHHHHHHHHTTT-CCSEECCC
T ss_pred hhhhhHHhhh-ccCCccCCccCCCHHHHHHHHHcC-CCcEEEeC
Confidence 6777777665 489999888899999999999887 78988764
No 329
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=91.82 E-value=1.7 Score=46.48 Aligned_cols=128 Identities=5% Similarity=-0.003 Sum_probs=84.2
Q ss_pred ccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchH
Q psy9514 376 CGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNI 455 (611)
Q Consensus 376 ~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~ 455 (611)
...+++.+++.++... ..||..+-+..+-. ++...+.+++++++++..+.+.+=....-+..+
T Consensus 185 ~~~~~~~~~~~a~~~~-~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~ 247 (412)
T 4h1z_A 185 PEDTRAKRAELAAAWQ-AKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAHTASE 247 (412)
T ss_dssp CCSSHHHHHHHHHHHH-HTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCCCHHH
T ss_pred CCCcHHHHHHHHHHHH-hcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCCCHHH
Confidence 3446777777666554 34888877753321 122345567888888655443332222224577
Q ss_pred HHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc
Q psy9514 456 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA 535 (611)
Q Consensus 456 a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a 535 (611)
+.++++.|++.|+.+|- | ...+.
T Consensus 248 A~~~~~~l~~~~l~~iE-------q--------------------------------------------------P~~~~ 270 (412)
T 4h1z_A 248 AVALIKAMEPHGLWFAE-------A--------------------------------------------------PVRTE 270 (412)
T ss_dssp HHHHHHHHGGGCEEEEE-------C--------------------------------------------------CSCTT
T ss_pred HHHHHHhhcccccceec-------C--------------------------------------------------CCCcc
Confidence 88999999988865532 1 12334
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+++.++++.+. .++||.+.=.+.+..|+.++++.+ .+|.|++
T Consensus 271 d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~div~~ 312 (412)
T 4h1z_A 271 DIDGLARVAAS-VSTAIAVGEEWRTVHDMVPRVARR-ALAIVQP 312 (412)
T ss_dssp CHHHHHHHHHH-CSSEEEECTTCCSHHHHHHHHHTT-CCSEECC
T ss_pred chHHHHHHHhh-cCCccccCCcccchHhHHHHHHcC-CCCEEEe
Confidence 66777777665 489999888999999999999987 7888875
No 330
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=91.81 E-value=0.88 Score=46.65 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=29.7
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 549 PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.++|.+.||| +++.+.++.+.| +|.+.+|....
T Consensus 252 ~~~I~ASGGI-t~~~i~~~a~~G--vD~isvGsli~ 284 (296)
T 1qap_A 252 QARLEVSGNV-TAETLREFAETG--VDFISVGALTK 284 (296)
T ss_dssp TCCEEECCCS-CHHHHHHHHHTT--CSEEECSHHHH
T ss_pred CCeEEEECCC-CHHHHHHHHHcC--CCEEEEeHHHc
Confidence 5899999999 999999999998 99999997443
No 331
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=91.72 E-value=0.35 Score=48.99 Aligned_cols=50 Identities=10% Similarity=0.086 Sum_probs=40.5
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCch
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~l 589 (611)
++++.++.+. +++||+..+-|.++.++++++..| +|+|.++-+.|.+..+
T Consensus 102 ~~~l~~ir~~-v~lPvl~kdfiid~~qv~~A~~~G--AD~VlLi~a~l~~~~l 151 (272)
T 3qja_A 102 LDDLDAVRAS-VSIPVLRKDFVVQPYQIHEARAHG--ADMLLLIVAALEQSVL 151 (272)
T ss_dssp HHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTT--CSEEEEEGGGSCHHHH
T ss_pred HHHHHHHHHh-CCCCEEECccccCHHHHHHHHHcC--CCEEEEecccCCHHHH
Confidence 4566666554 689999988899999999999987 9999999888765544
No 332
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.56 E-value=1.5 Score=45.00 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=54.1
Q ss_pred hcccceEEecc-CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 393 QMVVDFVDVNL-GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 393 ~~g~D~IELN~-gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.+|||+|=+-. +.- ....|+-....-..+-+...++.|...++.||++-+-.|+. +...+.+.++.++++|+++|
T Consensus 40 ~aGf~ai~vs~~s~a---~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv 115 (298)
T 3eoo_A 40 AVGFKAVYLSGGGVA---ANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIARTIRSFIKAGVGAV 115 (298)
T ss_dssp HHTCSCEEECHHHHH---HHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHHHHHHHHTTCSEE
T ss_pred HcCCCEEEECcHHHH---HHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHHHHHHHHhCCeEE
Confidence 34888876632 111 01122222222344555666677777778999999888863 55667888999999999999
Q ss_pred EEEcccc
Q psy9514 472 TLHGRTR 478 (611)
Q Consensus 472 tvhgR~r 478 (611)
+|-+...
T Consensus 116 ~iEDq~~ 122 (298)
T 3eoo_A 116 HLEDQVG 122 (298)
T ss_dssp EEECBCC
T ss_pred EECCCCC
Confidence 9988653
No 333
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=91.42 E-value=2 Score=46.43 Aligned_cols=123 Identities=13% Similarity=0.157 Sum_probs=79.1
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a 456 (611)
.+|+.+++.|+.+.+..||..|-|..|-. +++.-.+.|++|++++ ++++.|-.--++ +.+++
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w--~~~~A 249 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAW--TVETS 249 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCS--CHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCC--CHHHH
Confidence 57888888877765445999988875532 2333456778888887 234444322233 34678
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
..+++.|++. +.+|- | +..+
T Consensus 250 i~~~~~L~~~-l~~iE-------e----------------------------------------------------P~~~ 269 (441)
T 3vc5_A 250 IRVGRALDGV-LEYLE-------D----------------------------------------------------PTPG 269 (441)
T ss_dssp HHHHHHTTTT-CSEEE-------C----------------------------------------------------CSSS
T ss_pred HHHHHHHHHH-HHHhh-------c----------------------------------------------------cCCC
Confidence 8888888776 55432 1 1124
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
++.++++.+. .++||.+.=.+.++.++.++++.+ .+|.|++
T Consensus 270 ~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-a~dii~~ 310 (441)
T 3vc5_A 270 IDGMARVAAE-VPMPLATNMCVVTPEHLPAAVERR-PIGVLLI 310 (441)
T ss_dssp HHHHHHHHTT-SSSCEEESSSCCSGGGHHHHHHHC-CCSEEEE
T ss_pred HHHHHHHHhc-CCCCEEeCCCCCCHHHHHHHHHhC-CCCEEee
Confidence 5555665544 478887766778888888888776 6787776
No 334
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=91.39 E-value=1.5 Score=43.01 Aligned_cols=136 Identities=12% Similarity=0.043 Sum_probs=77.4
Q ss_pred HHHHHHHhhcCC-CEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccc-ccccccCcChhHHHHHhh---------
Q psy9514 428 SVITCMNEVSSL-PITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTR-EQRYTKQADWDYIEKCAQ--------- 496 (611)
Q Consensus 428 eIv~av~~~~~~-PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r-~qr~~~~adw~~i~~~~~--------- 496 (611)
++++.+++..+. +|..-+..+ |-.++....++.+.++ |++|||+-.. ... +..+.+
T Consensus 42 ~~v~~L~~~~~~~~VflDlK~~--DI~nTv~~~~~~~~~~--d~vTVh~~~G~~~~---------~~~a~~~~~~~~~~v 108 (222)
T 4dbe_A 42 DKTRELLIGLDVEEIIVDFKLA--DIGYIMKSIVERLSFA--NSFIAHSFIGVKGS---------LDELKRYLDANSKNL 108 (222)
T ss_dssp HHHHHHHHTCCCSEEEEEEEEC--SCHHHHHHHHTTCTTC--SEEEEESTTCTTTT---------HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhcCCCeEEEEeeec--chHHHHHHHHHHHHhC--CEEEEEcCcCcHHH---------HHHHHHHHHhcCCcE
Confidence 455556554577 888777764 3334444455556666 9999998543 211 111111
Q ss_pred --hcccCchhh-----hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHH-HHHHHH
Q psy9514 497 --LCSRDNNII-----HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYE-DYTESL 568 (611)
Q Consensus 497 --~~~~~~~~~-----~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~e-da~~~l 568 (611)
|...++... ..++...+++|++.+...+ +.+ +.+..+.+...+ .++..+||.--. +..+++
T Consensus 109 ~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~sa-------t~p---~e~~~ir~~~~~-~~~vtPGI~~~g~tp~~a~ 177 (222)
T 4dbe_A 109 YLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGG-------TKL---DHITQYRRDFEK-MTIVSPGMGSQGGSYGDAV 177 (222)
T ss_dssp EEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEECT-------TCH---HHHHHHHHHCTT-CEEEECCBSTTSBCTTHHH
T ss_pred EEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEECC-------CCH---HHHHHHHHhCCC-CEEEcCCcccCccCHHHHH
Confidence 112222211 3355666778887765422 111 334444444555 677788886321 455667
Q ss_pred HcCCCccEEEEcHHhhhCCch
Q psy9514 569 KKSPSISGVMIGRGALIKPWI 589 (611)
Q Consensus 569 ~~G~~aD~VmIGRgaL~dP~l 589 (611)
..| +|.++|||+++.-++.
T Consensus 178 ~~G--ad~iVVGR~I~~A~dP 196 (222)
T 4dbe_A 178 CAG--ADYEIIGRSIYNAGNP 196 (222)
T ss_dssp HHT--CSEEEECHHHHTSSSH
T ss_pred HcC--CCEEEECHHhcCCCCH
Confidence 787 9999999999985553
No 335
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=91.38 E-value=2.4 Score=44.99 Aligned_cols=142 Identities=9% Similarity=0.055 Sum_probs=86.6
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.+....+...+++.+.+.++.+. ..||..|-|..|.+.... .....++.-.+.|++|+++++ .+ .+|+-
T Consensus 155 v~~~~t~~~~~~e~~~~~a~~~~-~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~-d~--~L~vD 223 (393)
T 3u9i_A 155 LETDVTITTGSVTAAARAAQAIV-ARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAP-TA--RLILD 223 (393)
T ss_dssp EECCEEEC---CHHHHHHHHHHH-TTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHST-TS--EEEEE
T ss_pred eEEEEEecCCCHHHHHHHHHHHH-HcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCC-CC--eEEEE
Confidence 34444566678888887777664 359999988876541100 001124455677888888874 22 44542
Q ss_pred ccC--CchHHHHHHHHH--HHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 449 IHK--DNNIIHNFMPKF--RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 449 ~~~--~~~~a~~la~~l--~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
.+. +..++.+++++| ++.++.+|- |
T Consensus 224 aN~~w~~~~A~~~~~~L~~~~~~i~~iE-------e-------------------------------------------- 252 (393)
T 3u9i_A 224 GNCGYTAPDALRLLDMLGVHGIVPALFE-------Q-------------------------------------------- 252 (393)
T ss_dssp CCSCCCHHHHHHHHHTTTTTTCCCSEEE-------C--------------------------------------------
T ss_pred ccCCCCHHHHHHHHHHHhhCCCCeEEEE-------C--------------------------------------------
Confidence 222 346677888888 666655442 1
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
-..+.+++.++++.+. .++||.+.=.++++.++.++++.+ .+|.|++=
T Consensus 253 ------P~~~~d~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~d~i~~k 300 (393)
T 3u9i_A 253 ------PVAKDDEEGLRRLTAT-RRVPVAADESVASATDAARLARNA-AVDVLNIK 300 (393)
T ss_dssp ------CSCTTCTTHHHHHHHT-CSSCEEESTTCCSHHHHHHHHHTT-CCSEEEEC
T ss_pred ------CCCCCcHHHHHHHHhh-CCCcEEeCCcCCCHHHHHHHHHcC-CCCEEEec
Confidence 1222355566666554 589999888899999999999987 79998864
No 336
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=91.37 E-value=0.77 Score=46.48 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=33.3
Q ss_pred CCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 547 CSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 547 ~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.+.+||.+.||| +++.+.++++.| +|++.+|.....-|+
T Consensus 227 ~~~~~i~AsGGI-~~~ni~~~~~aG--aD~i~vGs~i~~a~~ 265 (273)
T 2b7n_A 227 YPFVLLEASGNI-SLESINAYAKSG--VDAISVGALIHQATF 265 (273)
T ss_dssp CTTCEEEEESSC-CTTTHHHHHTTT--CSEEECTHHHHTCCC
T ss_pred CCCcEEEEECCC-CHHHHHHHHHcC--CcEEEEcHHhcCCCC
Confidence 356899999999 899999999987 999999987665454
No 337
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=91.27 E-value=2.5 Score=44.74 Aligned_cols=134 Identities=12% Similarity=0.083 Sum_probs=87.2
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.+....+...+++.+.+.++.+.+ .||..|-|..|.. .++.-.+.|++|+++++ .+ .+|+-
T Consensus 134 v~~~~t~~~~~~e~~~~~a~~~~~-~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~-~~--~L~vD 194 (389)
T 3s5s_A 134 LTTDITITTGSPERAEEAARRAAA-MGFRALKVKVGGR---------------LAASDPARIEAIHAAAP-GA--SLILD 194 (389)
T ss_dssp EECCEEECSSCSHHHHHHHHHHHH-HTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCT-TC--EEEEE
T ss_pred eEEEeeecCCCHHHHHHHHHHHHH-cCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCC-CC--eEEEE
Confidence 344455666788888877776543 4898888865432 12333556788888774 22 45543
Q ss_pred ccC--CchHHHHHHHHH--HHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 449 IHK--DNNIIHNFMPKF--RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 449 ~~~--~~~~a~~la~~l--~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
.+. +..++.+++++| ++.++.+|- |
T Consensus 195 aN~~w~~~~A~~~~~~L~~~~~~i~~iE-------e-------------------------------------------- 223 (389)
T 3s5s_A 195 GNGGLTAGEALALVAHARRLGADVALLE-------Q-------------------------------------------- 223 (389)
T ss_dssp CTTCSCHHHHHHHHHHHHHTTCEEEEEE-------C--------------------------------------------
T ss_pred CCCCCCHHHHHHHHHHHhhCCCCeEEEE-------C--------------------------------------------
Confidence 222 346788888888 444333221 1
Q ss_pred ccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 525 RTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 525 rtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
-..+.+++.++++.+. .++||.+.=.++++.++.++++.+ .+|.|++=
T Consensus 224 ------P~~~~d~~~~~~l~~~-~~iPIa~dEs~~~~~~~~~~i~~~-a~d~v~~k 271 (389)
T 3s5s_A 224 ------PVPRDDWDGMKEVTRR-AGVDVAADESAASAEDVLRVAAER-AATVVNIK 271 (389)
T ss_dssp ------CSCTTCHHHHHHHHHH-SSSCEEESTTCSSHHHHHHHHHTT-CCSEEEEC
T ss_pred ------CCCcccHHHHHHHHhh-CCCCEEECCCCCCHHHHHHHHHcC-CCCEEEec
Confidence 1233467777777665 489999888899999999999987 79999874
No 338
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=90.89 E-value=8.3 Score=38.46 Aligned_cols=93 Identities=13% Similarity=0.226 Sum_probs=67.2
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccc---cChHHHHHHHHHHHhhc-CCCEEEEE
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLL---QRANILQSVITCMNEVS-SLPITVKT 445 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl---~r~~~l~eIv~av~~~~-~~PvtVKi 445 (611)
.+.|-+.|.+.+++.+-++.+. ..|+|.||+=+- ++ .+...+.+.+..++..+ +.|+.+-+
T Consensus 21 kIcvpl~~~t~~e~l~~a~~~~-~~~aD~vElR~D--------------~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~ 85 (258)
T 4h3d_A 21 KICVPIIGKNKKDIIKEAKELK-DACLDIIEWRVD--------------FFENVENIKEVKEVLYELRSYIHDIPLLFTF 85 (258)
T ss_dssp EEEEEECCSSHHHHHHHHHHHT-TSSCSEEEEEGG--------------GCTTTTCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred EEEEEeCCCCHHHHHHHHHHHh-hcCCCEEEEeec--------------cccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3678899999999888777764 458999998432 22 24578888999998877 69999999
Q ss_pred EccccC-----CchHHHHHHHHHHHcC-CCEEEEEccc
Q psy9514 446 RTGIHK-----DNNIIHNFMPKFRDWG-ASLITLHGRT 477 (611)
Q Consensus 446 R~g~~~-----~~~~a~~la~~l~~aG-vd~ItvhgR~ 477 (611)
|.-... +.+.-..+.+.+...| +++|.|--..
T Consensus 86 Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~ 123 (258)
T 4h3d_A 86 RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFM 123 (258)
T ss_dssp CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG
T ss_pred echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc
Confidence 984332 2234556666666666 8999886543
No 339
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=90.86 E-value=0.39 Score=53.03 Aligned_cols=43 Identities=19% Similarity=0.361 Sum_probs=35.3
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
.+.++.+.+.+++++|| .|.|-|++-+..+++.| +|+|-||-|
T Consensus 310 ~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li~aG--AD~vkVGiG 352 (556)
T 4af0_A 310 IEFIKWIKQTYPKIDVI-AGNVVTREQAAQLIAAG--ADGLRIGMG 352 (556)
T ss_dssp HHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHT--CSEEEECSS
T ss_pred HHHHHHHHhhCCcceEE-eccccCHHHHHHHHHcC--CCEEeecCC
Confidence 35666666777778877 58899999999999998 999998865
No 340
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.69 E-value=0.43 Score=52.49 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=34.4
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
++.++.+.+...++||++ |+|.+.+++..+.+.| +|+|.+|.
T Consensus 284 ~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aG--ad~I~vg~ 325 (514)
T 1jcn_A 284 IAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAG--VDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHT--CSEEEECS
T ss_pred HHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcC--CCEEEECC
Confidence 466777766655789886 7889999999999998 99998854
No 341
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.67 E-value=1.5 Score=43.13 Aligned_cols=181 Identities=14% Similarity=0.177 Sum_probs=103.7
Q ss_pred eecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHH---hhcCCCEEEEEEccc
Q psy9514 373 VQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMN---EVSSLPITVKTRTGI 449 (611)
Q Consensus 373 vQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~---~~~~~PvtVKiR~g~ 449 (611)
+.++..+.+.+..| ...|.|-|||+.+=. .| .|.-....+ +.++ +.+++||-|-||.-.
T Consensus 4 lEvc~~s~~~a~~A-----~~~GAdRIELc~~L~--------~G-GlTPS~g~i----~~~~~~~~~~~ipV~vMIRPR~ 65 (224)
T 2bdq_A 4 REFCAENLTDLTRL-----DKAIISRVELCDNLA--------VG-GTTPSYGVI----KEANQYLHEKGISVAVMIRPRG 65 (224)
T ss_dssp EEEEEETTTTGGGC-----CTTTCCEEEEEBCGG--------GT-CBCCCHHHH----HHHHHHHHHTTCEEEEECCSSS
T ss_pred EEEEECCHHHHHHH-----HHcCCCEEEEcCCcc--------cC-CcCCCHHHH----HHHHHhhhhcCCceEEEECCCC
Confidence 34555555544444 234999999974211 11 122223333 3344 567899999999721
Q ss_pred cC------CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh----hh--------hcchh
Q psy9514 450 HK------DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI----IH--------NFMPK 511 (611)
Q Consensus 450 ~~------~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~----~~--------~~~~~ 511 (611)
.+ +......-++.+.+.|++.|.+-.=+.. ..-|++...++.++.....-. .+ ...+.
T Consensus 66 GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d----g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~ 141 (224)
T 2bdq_A 66 GNFVYNDLELRIMEEDILRAVELESDALVLGILTSN----NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQ 141 (224)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCC----CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHH
Confidence 11 1133445566788999999876433322 234666666666554432221 11 22456
Q ss_pred hHhcCCceEEeccccccccccCCccHHHHHHHHhhC-CCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 512 FRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC-SPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 512 l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~-~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+.+.|++.|.-+|..... .-....+.++++++.. ..|-|+..|||+ .+.+.++++.. +++.|=.
T Consensus 142 L~~lGv~rILTSG~~~~~--~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~-~~Ni~~l~~~t-Gv~e~H~ 206 (224)
T 2bdq_A 142 LVALGFTRILLHGSSNGE--PIIENIKHIKALVEYANNRIEIMVGGGVT-AENYQYICQET-GVKQAHG 206 (224)
T ss_dssp HHHTTCCEEEECSCSSCC--CGGGGHHHHHHHHHHHTTSSEEEECSSCC-TTTHHHHHHHH-TCCEEEE
T ss_pred HHHcCCCEEECCCCCCCC--cHHHHHHHHHHHHHhhCCCeEEEeCCCCC-HHHHHHHHHhh-CCCEEcc
Confidence 788899999766643321 1222456677766543 357788888884 67777777543 3877764
No 342
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.65 E-value=0.65 Score=49.67 Aligned_cols=65 Identities=12% Similarity=0.172 Sum_probs=43.3
Q ss_pred cchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 508 FMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 508 ~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.++.+.+.|++.|.+..-. + ......+.++++.+.. ++|||+ |.|.|.+++..+++.| +|+|.+|
T Consensus 148 ~~~~lveaGvdvIvldta~--G--~~~~~~e~I~~ik~~~-~i~Vi~-g~V~t~e~A~~a~~aG--AD~I~vG 212 (400)
T 3ffs_A 148 RAKLLVEAGVDVIVLDSAH--G--HSLNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENG--ADGIKVG 212 (400)
T ss_dssp HHHHHHHHTCSEEEECCSC--C--SBHHHHHHHHHHHTTC-CCEEEE-EEECSHHHHHHHHHTT--CSEEEEC
T ss_pred HHHHHHHcCCCEEEEeCCC--C--CcccHHHHHHHHHhcC-CCeEEE-eecCCHHHHHHHHHcC--CCEEEEe
Confidence 3455666677766542100 0 0111246666665554 789886 7889999999999997 9999996
No 343
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=90.63 E-value=0.07 Score=39.81 Aligned_cols=25 Identities=28% Similarity=0.679 Sum_probs=22.2
Q ss_pred CCCCCCCcceeccccCCCCCccccC
Q psy9514 110 EDISEQCYVFLQHGYCPMGIACRFG 134 (611)
Q Consensus 110 ~d~~~~C~~~~~~G~C~~G~~Crf~ 134 (611)
.+....|--|.++|+||+|.+|-|.
T Consensus 17 ~~~~~iC~~FSayGwCp~G~~Cp~S 41 (50)
T 2fc6_A 17 PHPTSICDNFSAYGWCPLGPQCPQS 41 (50)
T ss_dssp CCCSCBCSHHHHTCCCTTGGGCSSB
T ss_pred ccccchhhhccccccCCCCCCCCcc
Confidence 3567799999999999999999885
No 344
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=90.51 E-value=4 Score=41.84 Aligned_cols=94 Identities=16% Similarity=0.109 Sum_probs=58.9
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCC-Cccceeccc-cccccccChHHHHHHHHHHHhh--cCCCEEEEEEcccc--CC
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGC-PIEFIYKQG-SGSGLLQRANILQSVITCMNEV--SSLPITVKTRTGIH--KD 452 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gC-P~~~v~~~g-~GsaLl~r~~~l~eIv~av~~~--~~~PvtVKiR~g~~--~~ 452 (611)
++..+.+.++.+.+ +|+.+|-|--.. | .+... .|..|....+.+.+|-.++... .+.++.|--|+-.. ..
T Consensus 93 ~~~~v~~tv~~l~~-aGaagv~iEDq~~~---Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 168 (302)
T 3fa4_A 93 GPIMVARTTEQYSR-SGVAAFHIEDQVQT---KRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHG 168 (302)
T ss_dssp SHHHHHHHHHHHHH-TTCCEEEECSBCCC----------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHC
T ss_pred CHHHHHHHHHHHHH-cCCcEEEECCCCCC---cccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCC
Confidence 46777777777764 699999885432 3 11111 2344555455555555544332 37888888887432 24
Q ss_pred chHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
.+++++=+++..++|+|.|-+++-
T Consensus 169 ldeAi~Ra~ay~eAGAD~ifi~g~ 192 (302)
T 3fa4_A 169 YEESVARLRAARDAGADVGFLEGI 192 (302)
T ss_dssp HHHHHHHHHHHHTTTCSEEEETTC
T ss_pred HHHHHHHHHHHHHcCCCEEeecCC
Confidence 466777778888999999988774
No 345
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=90.19 E-value=6 Score=40.72 Aligned_cols=127 Identities=9% Similarity=0.016 Sum_probs=78.4
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~ 457 (611)
.+++.+.+.++.+. ..||..|-|..|- ..++.-.+.+++|++.++..+.+.+=....-+...+.
T Consensus 115 ~~~e~~~~~a~~~~-~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~ 178 (332)
T 2ozt_A 115 GSGQAALEQWQQSW-QRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATAN 178 (332)
T ss_dssp CTGGGHHHHHHHHH-HTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHH
T ss_pred CChHHHHHHHHHHH-HcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHH
Confidence 34555555544443 2478877776442 1244445777888887764433322111111346677
Q ss_pred HHHHHHHHc---CCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 458 NFMPKFRDW---GASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 458 ~la~~l~~a---Gvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++++.|++. ++.+|- | -..+
T Consensus 179 ~~~~~l~~~~~~~i~~iE-------q--------------------------------------------------P~~~ 201 (332)
T 2ozt_A 179 RWFAWLDRHGNGKIEYVE-------Q--------------------------------------------------PLPP 201 (332)
T ss_dssp HHHHHHHHHCCTTEEEEE-------C--------------------------------------------------CSCT
T ss_pred HHHHHHHhhccCCcceeE-------C--------------------------------------------------CCCC
Confidence 888888876 443321 1 1233
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.+++.++++.+. .++||.+-=.+.+..++.++++.+ .+|.|.+
T Consensus 202 ~d~~~~~~l~~~-~~ipIa~dEs~~~~~~~~~~~~~~-a~~~i~i 244 (332)
T 2ozt_A 202 DQWQALLSLAQT-VTTAIALDESVVSAAEVQRWVDRG-WPGFFVI 244 (332)
T ss_dssp TCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHTT-CCSEEEE
T ss_pred CCHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHhC-CCCEEEE
Confidence 467777777665 489999888899999999999987 6888776
No 346
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=90.17 E-value=2.8 Score=40.19 Aligned_cols=108 Identities=10% Similarity=0.040 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc--------Cc----h---hhhhcchhhHhcCCc
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR--------DN----N---IIHNFMPKFRDWGAS 518 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~--------~~----~---~~~~~~~~l~~~G~~ 518 (611)
..+.+++++++++|+++|++.+ .+.|..+...... .. . ...+.+..+.+.|++
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~~------------~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad 90 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRANT------------KEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCE 90 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEES------------HHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHCCCeeeccCC------------HHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCC
Confidence 4567778888888888876532 1233333332110 00 0 011234566789999
Q ss_pred eEEeccccccccccC-CccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 519 LITLHGRTREQRYTK-QADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 519 ~itihgrtr~g~~~~-~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+++|..... .+ ....+.+..+.+...+++++. ++.+++++.++.+.| +|.|+++
T Consensus 91 ~v~l~~~~~~---~p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~~~G--~d~i~~~ 146 (223)
T 1y0e_A 91 VIALDATLQQ---RPKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAARLG--FDYIGTT 146 (223)
T ss_dssp EEEEECSCSC---CSSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHHHTT--CSEEECT
T ss_pred EEEEeeeccc---CcccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHHHcC--CCEEEeC
Confidence 9999864321 11 122456666666554666654 678999999988887 9999986
No 347
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=90.12 E-value=11 Score=38.98 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=60.3
Q ss_pred hcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhc
Q psy9514 436 VSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDW 515 (611)
Q Consensus 436 ~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~ 515 (611)
..+.|+.+.+..+.+. ..+.+.++.+|+++|.+|....++... .
T Consensus 114 ~~~~pv~~~i~~~~~~-----~~~~~~~~~~gad~i~i~~~~~~~~~~---------------------------~---- 157 (349)
T 1p0k_A 114 NPNGLIFANLGSEATA-----AQAKEAVEMIGANALQIHLNVIQEIVM---------------------------P---- 157 (349)
T ss_dssp CSSSCEEEEEETTCCH-----HHHHHHHHHTTCSEEEEEECTTTTC----------------------------------
T ss_pred CCCceeEEeecCCCCH-----HHHHHHHHhcCCCeEEecccchhhhcC---------------------------C----
Confidence 3478998887754321 234556778899999999865332100 0
Q ss_pred CCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEe--cCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 516 GASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGN--GDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 516 G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgn--GgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.+ + ..-...++.+.++.+. .++||+.- |...+++++..+.+.| +|+|.+.
T Consensus 158 -------~~---~--~~~~~~~~~i~~vr~~-~~~Pv~vK~~~~~~~~~~a~~a~~~G--ad~I~v~ 209 (349)
T 1p0k_A 158 -------EG---D--RSFSGALKRIEQICSR-VSVPVIVKEVGFGMSKASAGKLYEAG--AAAVDIG 209 (349)
T ss_dssp -----------------CTTHHHHHHHHHHH-CSSCEEEEEESSCCCHHHHHHHHHHT--CSEEEEE
T ss_pred -------CC---C--cchHHHHHHHHHHHHH-cCCCEEEEecCCCCCHHHHHHHHHcC--CCEEEEc
Confidence 00 0 0000135677777655 48998864 5667899999999987 9999983
No 348
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.07 E-value=4.6 Score=40.86 Aligned_cols=151 Identities=14% Similarity=0.094 Sum_probs=82.8
Q ss_pred HhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHHHHHHHHHHcCCCE
Q psy9514 392 EQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 392 ~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
+.+|||+| |=... .. ....|+-..+.-..+.+...+++|.+.+. .||++-+=.|...+...+.+-+.+|.++|+++
T Consensus 46 e~aG~d~i-lvGdS-l~-~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~a 122 (275)
T 3vav_A 46 DRANVDVQ-LIGDS-LG-NVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRAGAQM 122 (275)
T ss_dssp HHTTCSEE-EECTT-HH-HHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHcCCCEE-EECcH-HH-HHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 34699999 42111 11 12233333333344555566677777774 78999888753366677888888888889999
Q ss_pred EEEEccccccc---------cccCc----ChhHHHHHhhh--cccCch---hhhhcchhhHhcCCceEEecccccccccc
Q psy9514 471 ITLHGRTREQR---------YTKQA----DWDYIEKCAQL--CSRDNN---IIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 471 ItvhgR~r~qr---------~~~~a----dw~~i~~~~~~--~~~~~~---~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
|.+-+...... ..... .-..+...... ..+... ...+-+..+.++|++.|.+-+
T Consensus 123 VklEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~-------- 194 (275)
T 3vav_A 123 VKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEA-------- 194 (275)
T ss_dssp EEEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEES--------
T ss_pred EEECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecC--------
Confidence 99988642200 00000 00000000000 111111 122345578999999998643
Q ss_pred CCccHHHHHHHHhhCCCCcEEEec
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNG 556 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnG 556 (611)
.+. ..++++.+. .++|+||-|
T Consensus 195 -vp~-~~a~~It~~-l~iP~igIG 215 (275)
T 3vav_A 195 -VPT-LVAAEVTRE-LSIPTIGIG 215 (275)
T ss_dssp -CCH-HHHHHHHHH-CSSCEEEES
T ss_pred -CCH-HHHHHHHHh-CCCCEEEEc
Confidence 222 245555555 589999876
No 349
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=90.03 E-value=2.1 Score=42.17 Aligned_cols=52 Identities=12% Similarity=0.177 Sum_probs=37.3
Q ss_pred HHHHHHHhhCCCCcEEEe-----cC--C---CCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHH
Q psy9514 538 DYIEKCAQLCSPAPLYGN-----GD--I---LSYEDYTESLKKSPSISGVMIGRGALIKPWIFQE 592 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgn-----Gg--I---~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~e 592 (611)
++|+++.+ .+++||||. || + .+.++++++++.| +|.|.++-+++.+|....+
T Consensus 59 ~~i~~ir~-~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G--ad~V~l~~~~~~~p~~l~~ 120 (232)
T 3igs_A 59 DNLRMTRS-LVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG--AAIIAVDGTARQRPVAVEA 120 (232)
T ss_dssp HHHHHHHT-TCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT--CSEEEEECCSSCCSSCHHH
T ss_pred HHHHHHHH-hcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC--CCEEEECccccCCHHHHHH
Confidence 45566544 468999872 33 3 3667899999998 9999999888778864433
No 350
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.97 E-value=1.3 Score=45.20 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=56.3
Q ss_pred hcccceEEecc-CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 393 QMVVDFVDVNL-GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 393 ~~g~D~IELN~-gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.+|||+|=+-. +.- .. .|+-....-..+-+...++.|.+.++.||++-+=.|+. +...+.+.++++.++|+++|
T Consensus 33 ~aG~~ai~vs~~~~a---~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv 107 (290)
T 2hjp_A 33 QAGFGGIWGSGFELS---AS-YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-NAVNVHYVVPQYEAAGASAI 107 (290)
T ss_dssp HHTCSEEEECHHHHH---HH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS-SHHHHHHHHHHHHHHTCSEE
T ss_pred HcCCCEEEEChHHHH---Hh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHHHHHHHhCCeEE
Confidence 34898886632 111 11 23333334455667777788888889999999888854 66778899999999999999
Q ss_pred EEEccc
Q psy9514 472 TLHGRT 477 (611)
Q Consensus 472 tvhgR~ 477 (611)
++-+..
T Consensus 108 ~iED~~ 113 (290)
T 2hjp_A 108 VMEDKT 113 (290)
T ss_dssp EEECBC
T ss_pred EEcCCC
Confidence 998765
No 351
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=89.92 E-value=15 Score=37.10 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=70.0
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEcc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTG 448 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g 448 (611)
.+.+.+.+.+.+++...++.+. ..|+|.|||=.-. +.. ....+.+.+.++.++..+ +.|+.+-+|..
T Consensus 41 ~i~v~l~~~~~~e~~~~~~~~~-~~gaD~VElRvD~---------l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~ 108 (276)
T 3o1n_A 41 KIIVSLMGKTITDVKSEALAYR-EADFDILEWRVDH---------FAN--VTTAESVLEAAGAIREIITDKPLLFTFRSA 108 (276)
T ss_dssp EEEEEECCSSHHHHHHHHHHHT-TSCCSEEEEEGGG---------CTT--TTCHHHHHHHHHHHHHHCCSSCEEEECCBG
T ss_pred EEEEEeCCCCHHHHHHHHHHHh-hCCCCEEEEEecc---------ccc--cCcHHHHHHHHHHHHHhcCCCCEEEEEEEh
Confidence 4778999999999988888774 3599999984221 000 113467888899999887 79999999983
Q ss_pred cc-----CCchHHHHHHHHHHHcC-CCEEEEEccc
Q psy9514 449 IH-----KDNNIIHNFMPKFRDWG-ASLITLHGRT 477 (611)
Q Consensus 449 ~~-----~~~~~a~~la~~l~~aG-vd~ItvhgR~ 477 (611)
.. .+.+.-.++.+.+.+.| +++|.|--..
T Consensus 109 ~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~ 143 (276)
T 3o1n_A 109 KEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT 143 (276)
T ss_dssp GGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG
T ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC
Confidence 22 23345667888888889 9999997543
No 352
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.85 E-value=1.7 Score=44.65 Aligned_cols=81 Identities=7% Similarity=0.009 Sum_probs=53.4
Q ss_pred hcccceEEecc-CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 393 QMVVDFVDVNL-GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 393 ~~g~D~IELN~-gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.+|||+|=+-. +.- . ..|+-....-..+-+...++.|.+.++.||++-+-.|+. +...+...++.++++|+++|
T Consensus 47 ~aG~dai~vs~~s~a---~-~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv 121 (305)
T 3ih1_A 47 NTGFLALYLSGAAYT---A-SKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFG-GVLNVARTAVEMVEAKVAAV 121 (305)
T ss_dssp HTTCSCEEECHHHHH---H-HHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSS-SHHHHHHHHHHHHHTTCSEE
T ss_pred HcCCCEEEECcHHHH---H-hCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCC-CHHHHHHHHHHHHHhCCcEE
Confidence 45888876632 111 0 113322223344555566677777778999999888853 34567788999999999999
Q ss_pred EEEcccc
Q psy9514 472 TLHGRTR 478 (611)
Q Consensus 472 tvhgR~r 478 (611)
+|-+...
T Consensus 122 ~iED~~~ 128 (305)
T 3ih1_A 122 QIEDQQL 128 (305)
T ss_dssp EEECBCS
T ss_pred EECCCCC
Confidence 9988653
No 353
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=89.74 E-value=0.54 Score=51.23 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=35.8
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
.|+.+.++.+..+.+||+ .|+|.+.+++..+++.| +|+|.+|.
T Consensus 261 ~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~G--ad~I~vg~ 303 (491)
T 1zfj_A 261 VLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAG--VDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTT--CSEEEECS
T ss_pred HHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcC--CCEEEECc
Confidence 356667766665589999 89999999999999987 99999984
No 354
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=89.73 E-value=2.3 Score=43.97 Aligned_cols=81 Identities=14% Similarity=0.021 Sum_probs=56.3
Q ss_pred hcccceEEeccC-CCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCE
Q psy9514 393 QMVVDFVDVNLG-CPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASL 470 (611)
Q Consensus 393 ~~g~D~IELN~g-CP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ 470 (611)
.+|||+|=+-.+ .- ....|+-....-..+-+...++.|.+.+ +.||++-+=.|+. +...+.+.++++.++|+++
T Consensus 57 ~aGfdai~vs~~~~a---~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~v~~tv~~l~~aGaag 132 (318)
T 1zlp_A 57 KTGFHAAFVSGYSVS---AAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLNVQRFIRELISAGAKG 132 (318)
T ss_dssp HTTCSEEEECHHHHH---HHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHHHHHHHHHHHHTTCCE
T ss_pred HcCCCEEEECcHHHh---hHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHHHHHHHHHHHHcCCcE
Confidence 458888766321 11 0112332223345566677777888888 8999999988854 6677889999999999999
Q ss_pred EEEEccc
Q psy9514 471 ITLHGRT 477 (611)
Q Consensus 471 ItvhgR~ 477 (611)
|+|-+..
T Consensus 133 v~iED~~ 139 (318)
T 1zlp_A 133 VFLEDQV 139 (318)
T ss_dssp EEEECBC
T ss_pred EEECCCC
Confidence 9998765
No 355
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=89.73 E-value=1.1 Score=49.46 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=34.3
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
++.++++.+...++||+ .|+|.+.+++..+++.| +|+|.+|-
T Consensus 285 ~~~i~~i~~~~~~~~vi-~g~v~t~e~a~~~~~aG--ad~i~vg~ 326 (511)
T 3usb_A 285 IDKVKEVRAKYPSLNII-AGNVATAEATKALIEAG--ANVVKVGI 326 (511)
T ss_dssp HHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHT--CSEEEECS
T ss_pred hhHHHHHHHhCCCceEE-eeeeccHHHHHHHHHhC--CCEEEECC
Confidence 45677777776668888 47899999999999998 99999853
No 356
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=89.42 E-value=3 Score=42.82 Aligned_cols=96 Identities=11% Similarity=0.095 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD 501 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~ 501 (611)
.++.+.+.++.+++..+.|+.|-+-+...-..+...+.++.+.+.|+++|++|+...
T Consensus 51 s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~p----------------------- 107 (328)
T 2gjl_A 51 SPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDP----------------------- 107 (328)
T ss_dssp SHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESCC-----------------------
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCCc-----------------------
Confidence 467788888989887778887766543100012345678888899999999886431
Q ss_pred chhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE-c
Q psy9514 502 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI-G 580 (611)
Q Consensus 502 ~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI-G 580 (611)
++++..+. .. ++||+. .+.|.+++..+.+.| +|+|.+ |
T Consensus 108 -----------------------------------~~~~~~l~-~~-gi~vi~--~v~t~~~a~~~~~~G--aD~i~v~g 146 (328)
T 2gjl_A 108 -----------------------------------GEHIAEFR-RH-GVKVIH--KCTAVRHALKAERLG--VDAVSIDG 146 (328)
T ss_dssp -----------------------------------HHHHHHHH-HT-TCEEEE--EESSHHHHHHHHHTT--CSEEEEEC
T ss_pred -----------------------------------HHHHHHHH-Hc-CCCEEe--eCCCHHHHHHHHHcC--CCEEEEEC
Confidence 23333333 33 678884 488999999988887 999988 5
Q ss_pred H
Q psy9514 581 R 581 (611)
Q Consensus 581 R 581 (611)
+
T Consensus 147 ~ 147 (328)
T 2gjl_A 147 F 147 (328)
T ss_dssp T
T ss_pred C
Confidence 4
No 357
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=89.27 E-value=0.68 Score=50.53 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=34.2
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.|+.++++.+..+++||+. |++.+++++..+.+.| +|+|.+|
T Consensus 265 ~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G--~d~I~v~ 306 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAG--ADAVKVG 306 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTT--CSEEEEC
T ss_pred HHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcC--CCEEEEc
Confidence 4567777777665789876 7789999999999887 9999994
No 358
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.26 E-value=1.9 Score=43.75 Aligned_cols=58 Identities=10% Similarity=0.221 Sum_probs=46.9
Q ss_pred ccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 420 LQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 420 l~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
.-..+-+...++.|.+.++.||++-+=.|+..+...+.+.++++.++|+++|++-+..
T Consensus 58 ~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~ 115 (275)
T 2ze3_A 58 TLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDAT 115 (275)
T ss_dssp SSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCc
Confidence 3455666677778888888999999988865566788899999999999999998764
No 359
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=89.11 E-value=1.7 Score=45.00 Aligned_cols=86 Identities=6% Similarity=-0.024 Sum_probs=48.2
Q ss_pred cceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcc
Q psy9514 369 NLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTG 448 (611)
Q Consensus 369 ~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g 448 (611)
.++...+...+++.+.+.++ ..||..|-|..|.+ |..+ +.-.+.|++|++++|..+.+.+=..
T Consensus 70 v~~~~ti~~~~~e~~~~~~~----~~G~~~~KiKvg~~---------g~~~----~~d~~~v~avR~~~G~~~~L~vDaN 132 (327)
T 2opj_A 70 VPVNATVPAVGPEEAARIVA----SSGCTTAKVKVAER---------GQSE----ANDVARVEAVRDALGPRGRVRIDVN 132 (327)
T ss_dssp EEBCEEECSCCHHHHHHHHH----HHCCSEEEEECCC-------------------CHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eEEeEEeCCCCHHHHHHHHH----HCCCCEEEEEeCCC---------CCCH----HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34444455567777655543 23899988876543 1122 2224677888888765443322211
Q ss_pred ccCCchHHHHHHHHHHHcCCCEE
Q psy9514 449 IHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 449 ~~~~~~~a~~la~~l~~aGvd~I 471 (611)
..=+...+..+++.|++.++.+|
T Consensus 133 ~~w~~~~A~~~~~~L~~~~l~~i 155 (327)
T 2opj_A 133 GAWDVDTAVRMIRLLDRFELEYV 155 (327)
T ss_dssp TCSCHHHHHHHHHHHGGGCEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEE
Confidence 11134678889999988776543
No 360
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=88.40 E-value=1.8 Score=44.06 Aligned_cols=38 Identities=11% Similarity=0.074 Sum_probs=31.7
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
..++|.+.||| +++.+.++.+.| +|.+.+|.....-|+
T Consensus 240 ~~v~ieaSGGI-t~~~i~~~a~tG--VD~isvG~l~~~a~~ 277 (284)
T 1qpo_A 240 PTVMLESSGGL-SLQTAATYAETG--VDYLAVGALTHSVRV 277 (284)
T ss_dssp TTCEEEEESSC-CTTTHHHHHHTT--CSEEECGGGTSSBCC
T ss_pred CCeEEEEECCC-CHHHHHHHHhcC--CCEEEECHHHcCCCC
Confidence 46899999999 699999999987 999999975544454
No 361
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=88.37 E-value=3.3 Score=43.42 Aligned_cols=132 Identities=11% Similarity=0.117 Sum_probs=70.8
Q ss_pred HHHHHHHHhhhccceeeeccCC---------CCcc-hhhccCCCc---------ccc-------ccccceeeeccc----
Q psy9514 328 LTKCTQLLEEQMAVDFVDVNLG---------CPIE-FIYKQGSGS---------GLL-------QRANLFGVQLCG---- 377 (611)
Q Consensus 328 ~~~~a~~l~~~~~v~~idln~g---------cp~~-~~~~~~~~~---------~l~-------~~~~~~ivQi~g---- 377 (611)
+..+|+...+ .++|.|+|+++ ||.. ..-++.+++ +++ ..+.++++-+..
T Consensus 160 f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 160 FVDAARRARD-AGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHH-HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHH-cCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 4555555443 68999999976 3532 212222221 011 113456776653
Q ss_pred ----CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCc
Q psy9514 378 ----NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDN 453 (611)
Q Consensus 378 ----~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~ 453 (611)
.+.+++...++.++ ..|+|.|++..+-....... -.+ +..-.++++.+++.+++||.+- |.-.+
T Consensus 239 ~~G~~~~~~~~~la~~L~-~~Gvd~i~vs~g~~~~~~~~-~~~------~~~~~~~~~~ir~~~~iPVi~~---GgI~s- 306 (363)
T 3l5l_A 239 GRDEQTLEESIELARRFK-AGGLDLLSVSVGFTIPDTNI-PWG------PAFMGPIAERVRREAKLPVTSA---WGFGT- 306 (363)
T ss_dssp SCHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSSCCCC-CCC------TTTTHHHHHHHHHHHTCCEEEC---SSTTS-
T ss_pred CCCCCCHHHHHHHHHHHH-HcCCCEEEEecCcccccccc-CCC------cchhHHHHHHHHHHcCCcEEEe---CCCCC-
Confidence 45677777787775 46999999987542110000 001 1122456677787788898653 22111
Q ss_pred hHHHHHHHHHHHcC-CCEEEEEcc
Q psy9514 454 NIIHNFMPKFRDWG-ASLITLHGR 476 (611)
Q Consensus 454 ~~a~~la~~l~~aG-vd~ItvhgR 476 (611)
.+.+..+.+.| +|+|.+ ||
T Consensus 307 ---~e~a~~~l~~G~aD~V~i-GR 326 (363)
T 3l5l_A 307 ---PQLAEAALQANQLDLVSV-GR 326 (363)
T ss_dssp ---HHHHHHHHHTTSCSEEEC-CH
T ss_pred ---HHHHHHHHHCCCccEEEe-cH
Confidence 23344444555 998765 44
No 362
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.34 E-value=1.8 Score=44.22 Aligned_cols=83 Identities=10% Similarity=0.068 Sum_probs=55.4
Q ss_pred hcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 393 QMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 393 ~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.+|||+|=+-.+.= . ....|+-....-..+-+...++.|.+.++.||++-+=.|+. +...+.+.++++.++|+++|+
T Consensus 39 ~aGf~ai~vs~s~~-a-~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~ 115 (287)
T 3b8i_A 39 DLGFECGILGGSVA-S-LQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRTVVELERAGIAALT 115 (287)
T ss_dssp HTTCSCEEECHHHH-H-HHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS-SHHHHHHHHHHHHHHTCSEEE
T ss_pred HcCCCEEEeCcHHH-H-HHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEE
Confidence 45888876532100 0 01122222233345566677777888888999999888854 667788899999999999999
Q ss_pred EEcccc
Q psy9514 473 LHGRTR 478 (611)
Q Consensus 473 vhgR~r 478 (611)
|-+...
T Consensus 116 iED~~~ 121 (287)
T 3b8i_A 116 IEDTLL 121 (287)
T ss_dssp EECBCC
T ss_pred EcCCCC
Confidence 988753
No 363
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=88.23 E-value=8.3 Score=40.37 Aligned_cols=134 Identities=15% Similarity=0.045 Sum_probs=78.3
Q ss_pred ccceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEE
Q psy9514 368 ANLFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTR 446 (611)
Q Consensus 368 ~~~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR 446 (611)
..+....+...+++.+.+.++...+ .||..+-|..|.. ..+.-.+.++++++++ |..+.+.+=
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~-~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vD 202 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQR-EGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAAD 202 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHH-HTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred ceeEeeecccCCHHHHHHHHHHHHh-cCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEe
Confidence 3455666777788877766665532 4888888765532 1223345667777665 444333222
Q ss_pred ccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccc
Q psy9514 447 TGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRT 526 (611)
Q Consensus 447 ~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrt 526 (611)
....=+..++.++++.+++.+. +| +|-
T Consensus 203 aN~~~~~~~A~~~~~~l~~~~~-~i-------EeP--------------------------------------------- 229 (376)
T 4h2h_A 203 GNRGWTTRDALRFSRECPDIPF-VM-------EQP--------------------------------------------- 229 (376)
T ss_dssp CTTCCCHHHHHHHHHHCTTSCE-EE-------ESC---------------------------------------------
T ss_pred eccCCCHHHHHHHHHHHhhccc-cc-------cCC---------------------------------------------
Confidence 1111134667777777765542 11 111
Q ss_pred ccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 527 REQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 527 r~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
..+++.++.+.+ ..++||.+-=.+.+..++.++++.+ .+|.|++
T Consensus 230 -------~~~~~~~~~l~~-~~~~pia~dE~~~~~~~~~~~~~~~-~~d~v~~ 273 (376)
T 4h2h_A 230 -------CNSFEDLEAIRP-LCHHALYMDEDGTSLNTVITAAATS-LVDGFGM 273 (376)
T ss_dssp -------SSSHHHHHHHGG-GCCSCEEESTTCCSHHHHHHHHHTT-CCSEECC
T ss_pred -------cchhhhHhhhhh-cccCccccCcccCCHHHHHHHHHhh-ccCcccc
Confidence 113444555443 3578887766788888888888876 6787765
No 364
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=87.98 E-value=28 Score=37.55 Aligned_cols=170 Identities=13% Similarity=0.188 Sum_probs=98.6
Q ss_pred eeecccC-chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 372 GVQLCGN-NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 372 ivQi~g~-~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
-+.|||- +++++..+++. |+|.|=+.+--+++.. =.++.+.+|++. .. .- ++|+.
T Consensus 256 ~~KICGit~~eda~~a~~~-----Gad~iGfIf~~~SpR~----------V~~~~a~~i~~~----~~-v~----~VgVF 311 (452)
T 1pii_A 256 ENKVCGLTRGQDAKAAYDA-----GAIYGGLIFVATSPRC----------VNVEQAQEVMAA----AP-LQ----YVGVF 311 (452)
T ss_dssp SCEECCCCSHHHHHHHHHH-----TCSEEEEECCTTCTTB----------CCHHHHHHHHHH----CC-CE----EEEEE
T ss_pred hccccCCCcHHHHHHHHhc-----CCCEEEeecCCCCCCC----------CCHHHHHHHHhc----CC-CC----EEEEE
Confidence 3688998 66676666544 7888877753222111 135666666665 11 11 22322
Q ss_pred CCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcc-------cCchhhhhcchhhHhc-CCceEEe
Q psy9514 451 KDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS-------RDNNIIHNFMPKFRDW-GASLITL 522 (611)
Q Consensus 451 ~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~-------~~~~~~~~~~~~l~~~-G~~~iti 522 (611)
-+ +....+.+.+...+.++|.+||-- +.+|+..+...++ ..... .. .+. ... .++.+.+
T Consensus 312 vn-~~~~~i~~~~~~~~ld~vQLHG~E---------~~~~~~~l~~~~p~~~~iika~~v~-~~-~~~-~~~~~~d~~Ll 378 (452)
T 1pii_A 312 RN-HDIADVVDKAKVLSLAAVQLHGNE---------EQLYIDTLREALPAHVAIWKALSVG-ET-LPA-REFQHVDKYVL 378 (452)
T ss_dssp SS-CCHHHHHHHHHHHTCSEEEECSCC---------CHHHHHHHHHHSCTTSEEEEEEECS-SS-CCC-CCCTTCCEEEE
T ss_pred eC-CCHHHHHHHHHhcCCCEEEECCCC---------CHHHHHHHHhhccCCCcEEEEEecC-Cc-cch-hhhhcccEEEe
Confidence 22 234567777788899999999953 3345555543221 11110 01 111 112 4677777
Q ss_pred ccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCC
Q psy9514 523 HGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKP 587 (611)
Q Consensus 523 hgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP 587 (611)
.. ..|+.....||..+.. ..+.|+|..||+ +++.+.+++.. ++.+|=+-.|.=..|
T Consensus 379 D~--~~GGtG~~fdW~~l~~----~~~~p~iLAGGL-~p~NV~~ai~~--~p~gvDvsSGVE~~p 434 (452)
T 1pii_A 379 DN--GQGGSGQRFDWSLLNG----QSLGNVLLAGGL-GADNCVEAAQT--GCAGLDFNSAVESQP 434 (452)
T ss_dssp ES--CSCCSSCCCCGGGGTT----SCCTTEEEESSC-CTTTHHHHHTT--CCSEEEECGGGEEET
T ss_pred cC--CCCCCCCccCHHHhhc----ccCCcEEEEcCC-CHHHHHHHHhc--CCCEEEeCCceeCCC
Confidence 64 2244445568976532 346899999999 68888887774 488888887765444
No 365
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.84 E-value=0.9 Score=48.34 Aligned_cols=41 Identities=17% Similarity=0.249 Sum_probs=32.6
Q ss_pred HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 537 WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 537 ~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
|+.++.+.+...++||+. |++.+++++..+.+.| +|+|.+|
T Consensus 182 ~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~G--ad~I~vg 222 (404)
T 1eep_A 182 IELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVG--ADCLKVG 222 (404)
T ss_dssp HHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTT--CSEEEEC
T ss_pred HHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcC--CCEEEEC
Confidence 566666666544789986 6788999999999887 9999994
No 366
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=87.80 E-value=3.3 Score=42.33 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=50.6
Q ss_pred cccceEEecc-CCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNL-GCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~-gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
+|||+|=+-. ++- . ..|+-....-..+-+...++.|.+.++.||++-+=.|+. +...+.+.++++.++|+++|+
T Consensus 38 aG~~ai~vsg~~~a---~-~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~ 112 (295)
T 1s2w_A 38 AGFKGIWGSGLSVS---A-QLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYG-NFNNARRLVRKLEDRGVAGAC 112 (295)
T ss_dssp HTCSCEEECCHHHH---H-TC---------CHHHHHHHHHHHHTCSSCEEEECCSSCS-SHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEeChHHHH---H-hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCC-CHHHHHHHHHHHHHcCCcEEE
Confidence 4888876541 111 0 122222122234455666777777788999999888853 456788889999999999999
Q ss_pred EEccc
Q psy9514 473 LHGRT 477 (611)
Q Consensus 473 vhgR~ 477 (611)
|-+..
T Consensus 113 iED~~ 117 (295)
T 1s2w_A 113 LEDKL 117 (295)
T ss_dssp EECBC
T ss_pred ECCCC
Confidence 98765
No 367
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=87.77 E-value=6 Score=38.21 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcc--------cCc----h---hhhhcchhhHhcCCce
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCS--------RDN----N---IIHNFMPKFRDWGASL 519 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~--------~~~----~---~~~~~~~~l~~~G~~~ 519 (611)
...++++.+.++|+++|++.+ ..++..+..+.. ... . ...+.+..+.++|++.
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~------------~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~ 104 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS------------VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAV 104 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES------------HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSE
T ss_pred hHHHHHHHHHHCCCcEeecCC------------HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCE
Confidence 678899999999999988742 233555544321 110 0 0123456778899999
Q ss_pred EEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEE
Q psy9514 520 ITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGV 577 (611)
Q Consensus 520 itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~V 577 (611)
|.+|.-..... .+....+.+..+.+...+++|+. ++.+++++..+++.| +|.|
T Consensus 105 V~l~~~~~~~~-~~~~~~~~i~~i~~~~~~~~v~~--~~~t~~ea~~a~~~G--ad~i 157 (234)
T 1yxy_A 105 IAMDCTKRDRH-DGLDIASFIRQVKEKYPNQLLMA--DISTFDEGLVAHQAG--IDFV 157 (234)
T ss_dssp EEEECCSSCCT-TCCCHHHHHHHHHHHCTTCEEEE--ECSSHHHHHHHHHTT--CSEE
T ss_pred EEEcccccCCC-CCccHHHHHHHHHHhCCCCeEEE--eCCCHHHHHHHHHcC--CCEE
Confidence 99887432110 01122466777766555666654 788999999999987 9999
No 368
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=87.54 E-value=1.4 Score=45.11 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=32.5
Q ss_pred CCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 547 CSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 547 ~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.+.+||.+.||| +++.+.++++.| +|++.+|.....-|+
T Consensus 242 ~~~~~I~ASGGI-t~~ni~~~~~aG--aD~i~vGs~i~~a~~ 280 (299)
T 2jbm_A 242 FPSVAVEASGGI-TLDNLPQFCGPH--IDVISMGMLTQAAPA 280 (299)
T ss_dssp CTTSEEEEESSC-CTTTHHHHCCTT--CCEEECTHHHHSCCC
T ss_pred CCCeeEEEECCC-CHHHHHHHHHCC--CCEEEEChhhcCCCC
Confidence 456899999999 899999999987 999999985544354
No 369
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.51 E-value=0.45 Score=38.81 Aligned_cols=37 Identities=22% Similarity=0.361 Sum_probs=28.3
Q ss_pred ccCCcccccCCCCCCCCCCCCCCCcCChhHHhhcCCCCCCCCCcceec
Q psy9514 74 DCYCPFLKDSTLEQTCKYGEKCKFVHDKNVFMKSKPEDISEQCYVFLQ 121 (611)
Q Consensus 74 ~~lC~~~~~~~~~~~C~~g~~C~f~Hd~~~yl~~k~~d~~~~C~~~~~ 121 (611)
..+|..|+.. +.|. |++|+|.|... ..-...|+.|..
T Consensus 38 ~~~C~~f~~~---G~C~-~~~C~f~H~~~-------~~~~~~C~~f~~ 74 (77)
T 2d9n_A 38 MPECYFYSKF---GECS-NKECPFLHIDP-------ESKIKDCPWSGP 74 (77)
T ss_dssp SCBCHHHHHT---CCCC-CSSCSSBCCCT-------TSSCSSSSCCTT
T ss_pred CCCCcccCCC---CccC-CCCeeccCCCc-------cccCCCCccccc
Confidence 5689999983 3699 99999999853 233568998853
No 370
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=87.02 E-value=1.2 Score=46.79 Aligned_cols=42 Identities=10% Similarity=0.201 Sum_probs=33.8
Q ss_pred cHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 536 DWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
.|+.++++.+...++||+ .|+|.|++++..+++.| +|+|.++
T Consensus 148 ~~~~i~~lr~~~~~~~vi-~g~v~t~e~A~~a~~aG--aD~I~v~ 189 (351)
T 2c6q_A 148 FVEFVKDVRKRFPQHTIM-AGNVVTGEMVEELILSG--ADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHTT--CSEEEEC
T ss_pred HHHHHHHHHHhcCCCeEE-EEeCCCHHHHHHHHHhC--CCEEEEC
Confidence 356677776665578888 47789999999999998 9999886
No 371
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.98 E-value=2.5 Score=42.55 Aligned_cols=137 Identities=15% Similarity=0.081 Sum_probs=77.2
Q ss_pred HHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh
Q psy9514 425 ILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI 504 (611)
Q Consensus 425 ~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~ 504 (611)
.+.+.++..++.-...+..-+-.| +++.+.+.++++.|+++|+|+|.+--=.. .-.+|...|.....
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aG-dP~~~~~~~~~~~l~~~GaD~iElgiPfS----DP~aDGp~Iq~a~~-------- 70 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIG-DPSPELSLKIIQTLVDNGADALELGFPFS----DPLADGPVIQGANL-------- 70 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETT-SSCHHHHHHHHHHHHHTTCSSEEEECCCS----CCTTCCHHHHHHHH--------
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEECCCCC----CCCCCCHHHHHHHH--------
Confidence 355566666554344555555444 46678899999999999999998853221 11234444443321
Q ss_pred hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCC-----HH-HHHHHHHcCCCccEEE
Q psy9514 505 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILS-----YE-DYTESLKKSPSISGVM 578 (611)
Q Consensus 505 ~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s-----~e-da~~~l~~G~~aD~Vm 578 (611)
..-+.|. +-..-++.++++.+...++||+.-|-.+. .+ .+.++.+.| +|+|.
T Consensus 71 ------~AL~~G~--------------~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aG--vdgvi 128 (267)
T 3vnd_A 71 ------RSLAAGT--------------TSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAG--VDSVL 128 (267)
T ss_dssp ------HHHHTTC--------------CHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHT--CCEEE
T ss_pred ------HHHHcCC--------------CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcC--CCEEE
Confidence 1111111 11123566777665546899988754321 13 344556666 99999
Q ss_pred EcHHhhhCCchHHHHHcc
Q psy9514 579 IGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 579 IGRgaL~dP~lf~ei~~g 596 (611)
|.--.+....-+.+..+.
T Consensus 129 i~Dlp~ee~~~~~~~~~~ 146 (267)
T 3vnd_A 129 IADVPVEESAPFSKAAKA 146 (267)
T ss_dssp ETTSCGGGCHHHHHHHHH
T ss_pred eCCCCHhhHHHHHHHHHH
Confidence 976655555544444333
No 372
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=86.97 E-value=5.8 Score=38.76 Aligned_cols=92 Identities=17% Similarity=0.122 Sum_probs=65.3
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCc
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGAS 518 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~ 518 (611)
.|++.-+|. .+.+.+.++++.+.+.|+++|.+.-++.
T Consensus 17 ~~ii~vir~---~~~~~~~~~~~al~~gGv~~iel~~k~~---------------------------------------- 53 (224)
T 1vhc_A 17 LKIVPVIAL---DNADDILPLADTLAKNGLSVAEITFRSE---------------------------------------- 53 (224)
T ss_dssp HCEEEEECC---SSGGGHHHHHHHHHHTTCCEEEEETTST----------------------------------------
T ss_pred CCeEEEEeC---CCHHHHHHHHHHHHHcCCCEEEEeccCc----------------------------------------
Confidence 366666775 3446788999999999999998854331
Q ss_pred eEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHc
Q psy9514 519 LITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKE 595 (611)
Q Consensus 519 ~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~ 595 (611)
...+.++++.+.+.+ -+++.|-+.+.+++..+++.| +|+|++|- .|+.+.+..++
T Consensus 54 ----------------~~~~~i~~l~~~~~~-l~vgaGtvl~~d~~~~A~~aG--Ad~v~~p~---~d~~v~~~ar~ 108 (224)
T 1vhc_A 54 ----------------AAADAIRLLRANRPD-FLIAAGTVLTAEQVVLAKSSG--ADFVVTPG---LNPKIVKLCQD 108 (224)
T ss_dssp ----------------THHHHHHHHHHHCTT-CEEEEESCCSHHHHHHHHHHT--CSEEECSS---CCHHHHHHHHH
T ss_pred ----------------hHHHHHHHHHHhCcC-cEEeeCcEeeHHHHHHHHHCC--CCEEEECC---CCHHHHHHHHH
Confidence 123456666666644 356777788999999999998 99999883 45655554443
No 373
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=86.80 E-value=1.1 Score=45.81 Aligned_cols=38 Identities=13% Similarity=0.061 Sum_probs=31.5
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
..+|+.+.||| +++.+.++.+.| +|++.+|.....-|+
T Consensus 239 ~~v~ieASGGI-t~eni~~~a~tG--VD~IsvGslt~sa~~ 276 (285)
T 1o4u_A 239 PNVIVEVSGGI-TEENVSLYDFET--VDVISSSRLTLQEVF 276 (285)
T ss_dssp TTSEEEEEECC-CTTTGGGGCCTT--CCEEEEGGGTSSCCC
T ss_pred CCceEEEECCC-CHHHHHHHHHcC--CCEEEEeHHHcCCCC
Confidence 46899999999 689999988887 999999976554444
No 374
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=86.80 E-value=0.3 Score=51.18 Aligned_cols=106 Identities=9% Similarity=0.051 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHc-CCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 454 NIIHNFMPKFRDW-GASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 454 ~~a~~la~~l~~a-Gvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
..+.++++.+.+. ++ .|++.-|..... + .......+++..+.++|++.|++|+|++.+.|+
T Consensus 112 ~~~~eiv~av~~~v~~-PV~vKiR~g~~~------~-----------~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~ 173 (350)
T 3b0p_A 112 ARVREILKAMGEAVRV-PVTVKMRLGLEG------K-----------ETYRGLAQSVEAMAEAGVKVFVVHARSALLALS 173 (350)
T ss_dssp HHHHHHHHHHHHHCSS-CEEEEEESCBTT------C-----------CCHHHHHHHHHHHHHTTCCEEEEECSCBC----
T ss_pred HHHHHHHHHHHHHhCC-ceEEEEecCcCc------c-----------ccHHHHHHHHHHHHHcCCCEEEEecCchhcccC
Confidence 4566677776653 43 466655542111 0 011234567788999999999999998875444
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHHcc
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~~g 596 (611)
+... ..+| -.+++.+.++.+..+ +.-+|+-|=+.+|.-..++.+|
T Consensus 174 g~~~-----------~~~~------~~~~~~i~~ik~~~~--~iPVianGgI~s~eda~~~l~G 218 (350)
T 3b0p_A 174 TKAN-----------REIP------PLRHDWVHRLKGDFP--QLTFVTNGGIRSLEEALFHLKR 218 (350)
T ss_dssp -----------------CC------CCCHHHHHHHHHHCT--TSEEEEESSCCSHHHHHHHHTT
T ss_pred cccc-----------cCCC------cccHHHHHHHHHhCC--CCeEEEECCcCCHHHHHHHHhC
Confidence 3210 0111 135666666665421 4455555677788877777653
No 375
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=86.73 E-value=5.1 Score=40.53 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=37.0
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCC-CEEEEE
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGA-SLITLH 474 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGv-d~Itvh 474 (611)
.|+..+++..++.++- .++.||.+|.-+ ..+..+....+..+...|. +.+-+|
T Consensus 127 Igs~~~~n~~ll~~~a-----~~~kPV~lk~G~--~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 127 IGARNMQNFPLLREVG-----RSGKPVLLKRGF--GNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp ECGGGTTCHHHHHHHH-----HHTCCEEEECCT--TCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECcccccCHHHHHHHH-----ccCCeEEEcCCC--CCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4778888888876655 258999998444 3345666777777888887 555556
No 376
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=86.66 E-value=2.3 Score=43.39 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=31.3
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 549 PAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 549 ~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.+|+++.||| +++.+.++.+.| +|+|.+|.....-|+
T Consensus 240 ~ipi~AsGGI-t~eni~~~a~tG--vD~IsVgs~~~~a~~ 276 (286)
T 1x1o_A 240 RVPLEASGNM-TLERAKAAAEAG--VDYVSVGALTHSAKA 276 (286)
T ss_dssp SSCEEEESSC-CHHHHHHHHHHT--CSEEECTHHHHSCCC
T ss_pred CCeEEEEcCC-CHHHHHHHHHcC--CCEEEEcHHHcCCCc
Confidence 6899999999 599999999998 999999875554343
No 377
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=86.46 E-value=2.7 Score=42.48 Aligned_cols=53 Identities=17% Similarity=0.329 Sum_probs=39.9
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEE
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVK 444 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVK 444 (611)
+.+.+.+.|+.+. ..|.|.||||+.-+ ..+.++.+..+|+.+++.+++||+|-
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~~~~pisID 84 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEVVDLPCCLD 84 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHhCCCeEEEe
Confidence 4455666666554 46999999997553 34567889999999998889999886
No 378
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=86.33 E-value=6.3 Score=41.13 Aligned_cols=123 Identities=10% Similarity=0.065 Sum_probs=73.7
Q ss_pred cChHHHHHHHHHHHhhcCCCEEEEEEccccC--CchHHHHH----HHHHHHcCCCEEEEEccccccccccCcChhHHHHH
Q psy9514 421 QRANILQSVITCMNEVSSLPITVKTRTGIHK--DNNIIHNF----MPKFRDWGASLITLHGRTREQRYTKQADWDYIEKC 494 (611)
Q Consensus 421 ~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~--~~~~a~~l----a~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~ 494 (611)
..++.+.+.++.+++.++.|+.|-+-..... +......+ .......|+....-. . .
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~--~-----~----------- 106 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPD--G-----G----------- 106 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSC--S-----C-----------
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCccc--c-----c-----------
Confidence 3577888889999988888888876543221 11122222 233345565532100 0 0
Q ss_pred hhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCc
Q psy9514 495 AQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSI 574 (611)
Q Consensus 495 ~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~a 574 (611)
......+.++.+.+.|++.|.+|.. ...++.+..+.+ .+++|+. .+.|.+++..+.+.| +
T Consensus 107 ------~~~~~~~~~~~~~~~g~~~V~~~~g--------~~~~~~i~~~~~--~g~~v~~--~v~t~~~a~~a~~~G--a 166 (369)
T 3bw2_A 107 ------RDDGYDAKLAVLLDDPVPVVSFHFG--------VPDREVIARLRR--AGTLTLV--TATTPEEARAVEAAG--A 166 (369)
T ss_dssp ------SSTTHHHHHHHHHHSCCSEEEEESS--------CCCHHHHHHHHH--TTCEEEE--EESSHHHHHHHHHTT--C
T ss_pred ------ccccHHHHHHHHHhcCCCEEEEeCC--------CCcHHHHHHHHH--CCCeEEE--ECCCHHHHHHHHHcC--C
Confidence 0011233455667788888888652 123566666644 2677775 578999999888887 9
Q ss_pred cEEEE-cH
Q psy9514 575 SGVMI-GR 581 (611)
Q Consensus 575 D~VmI-GR 581 (611)
|+|.+ |+
T Consensus 167 D~i~v~g~ 174 (369)
T 3bw2_A 167 DAVIAQGV 174 (369)
T ss_dssp SEEEEECT
T ss_pred CEEEEeCC
Confidence 99999 64
No 379
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=86.31 E-value=12 Score=38.80 Aligned_cols=52 Identities=23% Similarity=0.336 Sum_probs=35.2
Q ss_pred ccCCccHHHHHHHHhhCCCCcEE-EecCCCCHHHHHHHH----HcCCCc--cEEEEcHHhhhC
Q psy9514 531 YTKQADWDYIEKCAQLCSPAPLY-GNGDILSYEDYTESL----KKSPSI--SGVMIGRGALIK 586 (611)
Q Consensus 531 ~~~~a~~~~i~~~~k~~~~iPVI-gnGgI~s~eda~~~l----~~G~~a--D~VmIGRgaL~d 586 (611)
|+.....+.++++... .++||| ..||+ +.++..+.+ +.| + .||.+||....+
T Consensus 228 y~~~ea~~~f~~~~~a-~~~P~v~lsgG~-~~~~fl~~v~~A~~aG--a~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 228 YSKEEAAQAFREQEAS-TDLPYIYLSAGV-SAELFQETLVFAHKAG--AKFNGVLCGRATWAG 286 (332)
T ss_dssp BCHHHHHHHHHHHHHT-CSSCEEEECTTC-CHHHHHHHHHHHHHHT--CCCCEEEECHHHHTT
T ss_pred ccHHHHHHHHHHHHhc-CCCCEEEECCCC-CHHHHHHHHHHHHHcC--CCcceEEeeHHHHHh
Confidence 4443333556666544 589965 78898 566665554 456 7 999999998877
No 380
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.13 E-value=13 Score=38.00 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=51.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+ -|-...-..+.-.++++.+.+.++ +||.+- +|. +..++
T Consensus 31 D~~~l~~lv~~li~-~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG--vg~--st~~a 95 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQ-NGIEVIVPNGN----------TGEFYALTIEEAKQVATRVTELVNGRATVVAG--IGY--SVDTA 95 (314)
T ss_dssp CHHHHHHHHHHHHH-TTCSEECTTSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE--ECS--SHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECcc----------cCChhhCCHHHHHHHHHHHHHHhCCCCeEEec--CCc--CHHHH
Confidence 55666677766643 48888766531 222222233334556666665553 677665 443 55778
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 9999999999999988754
No 381
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=85.97 E-value=3 Score=39.76 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=60.0
Q ss_pred CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCC
Q psy9514 438 SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGA 517 (611)
Q Consensus 438 ~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~ 517 (611)
..|+..-+|. .+.....++++.+.+.|+++|.+.-...
T Consensus 6 ~~~i~~~i~~---~d~~~~~~~~~~~~~~G~~~i~l~~~~~--------------------------------------- 43 (212)
T 2v82_A 6 KLPLIAILRG---ITPDEALAHVGAVIDAGFDAVEIPLNSP--------------------------------------- 43 (212)
T ss_dssp SSCEEEECTT---CCHHHHHHHHHHHHHHTCCEEEEETTST---------------------------------------
T ss_pred CCCEEEEEeC---CCHHHHHHHHHHHHHCCCCEEEEeCCCh---------------------------------------
Confidence 3466655553 3446778889999999999988743220
Q ss_pred ceEEeccccccccccCCccHHHHHHHHhhCCCCc-EEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 518 SLITLHGRTREQRYTKQADWDYIEKCAQLCSPAP-LYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 518 ~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iP-VIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
.....++++.+.. +++ +||.|.+.+.++++.+++.| +|+|.+|. .++.+.+.+
T Consensus 44 -----------------~~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~G--ad~V~~~~---~~~~~~~~~ 97 (212)
T 2v82_A 44 -----------------QWEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARMG--CQLIVTPN---IHSEVIRRA 97 (212)
T ss_dssp -----------------THHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHTT--CCEEECSS---CCHHHHHHH
T ss_pred -----------------hHHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHcC--CCEEEeCC---CCHHHHHHH
Confidence 1123445544443 444 55788999999999999987 99999774 234444443
No 382
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.81 E-value=4.7 Score=41.90 Aligned_cols=133 Identities=15% Similarity=0.198 Sum_probs=75.3
Q ss_pred hhHHHHHHHHhhhccceeeeccCCC---------Ccc-hhhccCCCc---------cccc-----cccceeeeccc----
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGC---------PIE-FIYKQGSGS---------GLLQ-----RANLFGVQLCG---- 377 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gc---------p~~-~~~~~~~~~---------~l~~-----~~~~~ivQi~g---- 377 (611)
+.+..+|+...+ .++|.|+||++| |.. ..-++.+++ +++. -+.++++-+..
T Consensus 144 ~~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~ 222 (340)
T 3gr7_A 144 QAFQNGARRAKE-AGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYH 222 (340)
T ss_dssp HHHHHHHHHHHH-HTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHH-cCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 345666665554 579999999885 642 222222221 0110 04567776664
Q ss_pred ---CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCch
Q psy9514 378 ---NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNN 454 (611)
Q Consensus 378 ---~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~ 454 (611)
.+.+++.+.++.++ ..|+|.|++..|-........ .+..-.++++.+++.+++||.+- |.-.+.
T Consensus 223 ~~g~~~~~~~~la~~L~-~~Gvd~i~vs~g~~~~~~~~~--------~~~~~~~~~~~ik~~~~iPVi~~---GgI~s~- 289 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMK-EQGVDLVDVSSGAIVPARMNV--------YPGYQVPFAELIRREADIPTGAV---GLITSG- 289 (340)
T ss_dssp TTSCCGGGHHHHHHHHH-HTTCCEEEEECCCSSCCCCCC--------CTTTTHHHHHHHHHHTTCCEEEE---SSCCCH-
T ss_pred CCCCCHHHHHHHHHHHH-HcCCCEEEEecCCccCCCCCC--------CccccHHHHHHHHHHcCCcEEee---CCCCCH-
Confidence 35778888888886 469999999865421100000 11123456777888888998764 211122
Q ss_pred HHHHHHHHHHHcC-CCEEEEEcc
Q psy9514 455 IIHNFMPKFRDWG-ASLITLHGR 476 (611)
Q Consensus 455 ~a~~la~~l~~aG-vd~ItvhgR 476 (611)
+.+..+.+.| +|+|.+ ||
T Consensus 290 ---e~a~~~L~~G~aD~V~i-GR 308 (340)
T 3gr7_A 290 ---WQAEEILQNGRADLVFL-GR 308 (340)
T ss_dssp ---HHHHHHHHTTSCSEEEE-CH
T ss_pred ---HHHHHHHHCCCeeEEEe-cH
Confidence 2344444555 998765 44
No 383
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=85.81 E-value=7.6 Score=40.71 Aligned_cols=44 Identities=11% Similarity=0.375 Sum_probs=36.4
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
+...|+.+.++.+.. ++||+. +++.+++++..+++.| +|+|.|+
T Consensus 210 ~~~~~~~i~~l~~~~-~~pv~v-K~~~~~e~a~~a~~~G--ad~I~vs 253 (370)
T 1gox_A 210 RSLSWKDVAWLQTIT-SLPILV-KGVITAEDARLAVQHG--AAGIIVS 253 (370)
T ss_dssp TTCCHHHHHHHHHHC-CSCEEE-ECCCSHHHHHHHHHTT--CSEEEEC
T ss_pred ccchHHHHHHHHHHh-CCCEEE-EecCCHHHHHHHHHcC--CCEEEEC
Confidence 344688888887764 899994 7789999999999997 9999994
No 384
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.65 E-value=5.1 Score=41.21 Aligned_cols=52 Identities=10% Similarity=0.127 Sum_probs=40.0
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
.++.+.+.++.+++..+.|+.|.+-.. . +...+.++.+.+.|+++|.+|+..
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~-~---~~~~~~~~~~~~~g~d~V~l~~g~ 112 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV-S---PWADDLVKVCIEEKVPVVTFGAGN 112 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT-S---TTHHHHHHHHHHTTCSEEEEESSC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc-C---CCHHHHHHHHHHCCCCEEEECCCC
Confidence 578888899999988788988876542 1 234567888889999999998754
No 385
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.11 E-value=5.9 Score=38.76 Aligned_cols=50 Identities=8% Similarity=0.066 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCCCcEEEec-----C--C---CCHHHHHHHHHcCCCccEEEEcHHhhhCCchH
Q psy9514 538 DYIEKCAQLCSPAPLYGNG-----D--I---LSYEDYTESLKKSPSISGVMIGRGALIKPWIF 590 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnG-----g--I---~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf 590 (611)
++|+++.+ .+++|||+.- | + .+.++++++++.| +|.|.++-+++.+|...
T Consensus 59 ~~i~~ir~-~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG--ad~I~l~~~~~~~p~~l 118 (229)
T 3q58_A 59 ENLRTVRP-HLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG--ADIIAFDASFRSRPVDI 118 (229)
T ss_dssp HHHHHHGG-GCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT--CSEEEEECCSSCCSSCH
T ss_pred HHHHHHHH-hcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC--CCEEEECccccCChHHH
Confidence 44555544 4689998632 1 2 2567899999988 99999987777788543
No 386
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=85.04 E-value=9.3 Score=39.62 Aligned_cols=156 Identities=16% Similarity=0.065 Sum_probs=75.6
Q ss_pred CCCeEEEEecCCChhhHHHHHHHHhhh--ccceeeeccCCCCcchhhccCC-Cccccc---------cccceeeecccCc
Q psy9514 312 SEDLFGVQLCGNNPYVLTKCTQLLEEQ--MAVDFVDVNLGCPIEFIYKQGS-GSGLLQ---------RANLFGVQLCGNN 379 (611)
Q Consensus 312 ~e~~~~vQi~g~~p~~~~~~a~~l~~~--~~v~~idln~gcp~~~~~~~~~-~~~l~~---------~~~~~ivQi~g~~ 379 (611)
...+++++|.|..+..+...++.+.+. ...+++++|.+||....-..-. ..+++. ...++.+.+.-+-
T Consensus 125 ~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~ 204 (354)
T 3tjx_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYF 204 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCEEEEECCCC
T ss_pred CCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhcccccccCCCC
Confidence 357899999999988877766665443 2578999999999754211111 111111 1355666655542
Q ss_pred -hHHHHHHHHHHHHhcccceEEeccCC----------Cccce-ecccccccc-ccChHHHHHHHHHHHhhc-CCCEEEEE
Q psy9514 380 -PYVLTKCTQLLEEQMVVDFVDVNLGC----------PIEFI-YKQGSGSGL-LQRANILQSVITCMNEVS-SLPITVKT 445 (611)
Q Consensus 380 -p~~~~~aA~~l~~~~g~D~IELN~gC----------P~~~v-~~~g~GsaL-l~r~~~l~eIv~av~~~~-~~PvtVKi 445 (611)
.......+..+.+..+.++|-.+-+- ..... ...++|+.- --......++++.+.+.+ ++||+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg-- 282 (354)
T 3tjx_A 205 DFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFG-- 282 (354)
T ss_dssp SHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEE--
T ss_pred CchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEE--
Confidence 22333444444433344544433211 10000 011122110 112345667788887765 466532
Q ss_pred EccccCCchHHHHHHHHHHHcCCCEEEEE
Q psy9514 446 RTGIHKDNNIIHNFMPKFRDWGASLITLH 474 (611)
Q Consensus 446 R~g~~~~~~~a~~la~~l~~aGvd~Itvh 474 (611)
.|.-.+.. ..++.+ .+|+++|.|-
T Consensus 283 -~GGI~s~~---Da~e~i-~aGAs~Vqv~ 306 (354)
T 3tjx_A 283 -CGGVYTGE---DAFLHV-LAGASMVQVG 306 (354)
T ss_dssp -ESSCCSHH---HHHHHH-HHTEEEEEEC
T ss_pred -eCCcCCHH---HHHHHH-HcCCCEEEEC
Confidence 33222323 344444 4899999874
No 387
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=84.75 E-value=21 Score=37.09 Aligned_cols=123 Identities=7% Similarity=-0.025 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHH
Q psy9514 380 PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNF 459 (611)
Q Consensus 380 p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~l 459 (611)
++.+.+.++.+. ..||..+-+..|- +++.-.+.|+++++++|..+.+.+=....=+.+++.++
T Consensus 145 ~~~~~~~a~~~~-~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~ 207 (372)
T 3cyj_A 145 LRRLQEQLGGWA-AAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYW 207 (372)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 455555544443 2388888776431 34445677888888876443332222111134678888
Q ss_pred HHHHHHc-CCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHH
Q psy9514 460 MPKFRDW-GASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWD 538 (611)
Q Consensus 460 a~~l~~a-Gvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~ 538 (611)
++.|++. ++.+|- | -..+.+|+
T Consensus 208 ~~~l~~~~~i~~iE-------q--------------------------------------------------P~~~~d~~ 230 (372)
T 3cyj_A 208 AGAFAREAGISYLE-------E--------------------------------------------------PVSSEDRE 230 (372)
T ss_dssp HHHHHHHHCCCEEE-------C--------------------------------------------------SSCTTCHH
T ss_pred HHHHHhhcCCcEEE-------C--------------------------------------------------CCCcccHH
Confidence 8888887 776542 1 12233566
Q ss_pred HHHHHHhhCCC-CcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 539 YIEKCAQLCSP-APLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 539 ~i~~~~k~~~~-iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.++++.+.... +||.+-=.+.+..++.++ .+ .+|.|++
T Consensus 231 ~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~-a~d~i~i 269 (372)
T 3cyj_A 231 GLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AG-CVDILQA 269 (372)
T ss_dssp HHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HT-TCSEEEE
T ss_pred HHHHHHHhCCCCCCEECCCCccCHHHHHHH--hC-CCCEEec
Confidence 66666655422 788887788888888887 44 4888876
No 388
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=84.56 E-value=6.5 Score=38.39 Aligned_cols=100 Identities=12% Similarity=0.059 Sum_probs=68.6
Q ss_pred HHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhh
Q psy9514 426 LQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNII 505 (611)
Q Consensus 426 l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~ 505 (611)
..++++.+.+ .|+..-+|. .+.+.+.++++++.+.|++.|.+.-++.
T Consensus 16 ~~~~~~~l~~---~~ii~V~r~---~~~~~~~~~~~al~~gGv~~iel~~k~~--------------------------- 62 (225)
T 1mxs_A 16 AARIDAICEK---ARILPVITI---AREEDILPLADALAAGGIRTLEVTLRSQ--------------------------- 62 (225)
T ss_dssp HHHHHHHHHH---HSEEEEECC---SCGGGHHHHHHHHHHTTCCEEEEESSST---------------------------
T ss_pred HHHHHHHHHH---CCEEEEEeC---CCHHHHHHHHHHHHHCCCCEEEEecCCc---------------------------
Confidence 4455555544 367776774 2446788999999999999998854331
Q ss_pred hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 506 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 506 ~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
...+.++++.+.+.++ +++.|-+.+.+++..+++.| +|+|.+| + .
T Consensus 63 -----------------------------~~~~~i~~l~~~~~~~-~igagtvl~~d~~~~A~~aG--Ad~v~~p-~--~ 107 (225)
T 1mxs_A 63 -----------------------------HGLKAIQVLREQRPEL-CVGAGTVLDRSMFAAVEAAG--AQFVVTP-G--I 107 (225)
T ss_dssp -----------------------------HHHHHHHHHHHHCTTS-EEEEECCCSHHHHHHHHHHT--CSSEECS-S--C
T ss_pred -----------------------------cHHHHHHHHHHhCccc-EEeeCeEeeHHHHHHHHHCC--CCEEEeC-C--C
Confidence 1234566566666443 56777799999999999998 9999988 3 3
Q ss_pred CCchHHHH
Q psy9514 586 KPWIFQEI 593 (611)
Q Consensus 586 dP~lf~ei 593 (611)
++.+.+..
T Consensus 108 d~~v~~~~ 115 (225)
T 1mxs_A 108 TEDILEAG 115 (225)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 55554443
No 389
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=84.46 E-value=12 Score=39.54 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=76.9
Q ss_pred cceeeecccCc-hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEc
Q psy9514 369 NLFGVQLCGNN-PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRT 447 (611)
Q Consensus 369 ~~~ivQi~g~~-p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~ 447 (611)
.++...+...+ ++.+.+.++.+.+ .||..|-|..+ | + .+ .+.|++|++++ .. +.+|+
T Consensus 138 v~~~~~~~~~~~~e~~~~~~~~~~~-~G~~~~K~Kv~-~---------~----~d----~~~v~avR~~~-~~--~~l~v 195 (388)
T 3qld_A 138 VEVSATLGMSESLDVLIQSVDAAVE-QGFRRVKLKIA-P---------G----RD----RAAIKAVRLRY-PD--LAIAA 195 (388)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHH-TTCSEEEEECB-T---------T----BS----HHHHHHHHHHC-TT--SEEEE
T ss_pred EEEeEEecCCCCHHHHHHHHHHHHH-hCCCeEEEEeC-c---------H----HH----HHHHHHHHHHC-CC--CeEEE
Confidence 44455555554 8888777766543 48988888754 2 1 12 45677788776 22 23333
Q ss_pred cccC--CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 448 GIHK--DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 448 g~~~--~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
-.+. +..++.. ++.|++.++.+|- |
T Consensus 196 DaN~~~~~~~A~~-~~~l~~~~i~~iE-------e--------------------------------------------- 222 (388)
T 3qld_A 196 DANGSYRPEDAPV-LRQLDAYDLQFIE-------Q--------------------------------------------- 222 (388)
T ss_dssp ECTTCCCGGGHHH-HHHGGGGCCSCEE-------C---------------------------------------------
T ss_pred ECCCCCChHHHHH-HHHHhhCCCcEEE-------C---------------------------------------------
Confidence 2111 2244554 6677666654431 1
Q ss_pred cccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 526 TREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 526 tr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
-..+.+++.++++.+. .++||.+.=.+.+..++.++++.+ .+|.|++=
T Consensus 223 -----P~~~~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~~~~~-a~d~v~~k 270 (388)
T 3qld_A 223 -----PLPEDDWFDLAKLQAS-LRTPVCLDESVRSVRELKLTARLG-AARVLNVK 270 (388)
T ss_dssp -----CSCTTCHHHHHHHHHH-CSSCEEESTTCCSHHHHHHHHHHT-CCSEEEEC
T ss_pred -----CCCcccHHHHHHHHHh-CCCCEEeCCCCCCHHHHHHHHHcC-CCCEEEEC
Confidence 1223355666666554 468888777788888888888776 67777764
No 390
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=84.30 E-value=5.7 Score=41.04 Aligned_cols=133 Identities=15% Similarity=0.210 Sum_probs=73.3
Q ss_pred hhHHHHHHHHhhhccceeeeccCCC---------Ccc-hhhccCCCc---------cccc---c--ccceeeeccc----
Q psy9514 326 YVLTKCTQLLEEQMAVDFVDVNLGC---------PIE-FIYKQGSGS---------GLLQ---R--ANLFGVQLCG---- 377 (611)
Q Consensus 326 ~~~~~~a~~l~~~~~v~~idln~gc---------p~~-~~~~~~~~~---------~l~~---~--~~~~ivQi~g---- 377 (611)
+.+..+|+.+.+ .++|.|+||++| |.. ..-++.+++ +++. + +.++.+-+..
T Consensus 144 ~~~~~aA~~a~~-aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~ 222 (338)
T 1z41_A 144 QEFKQAAARAKE-AGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYT 222 (338)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCS
T ss_pred HHHHHHHHHHHH-cCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccC
Confidence 345666666554 679999999886 431 111222221 0000 0 4566666554
Q ss_pred ---CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCch
Q psy9514 378 ---NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNN 454 (611)
Q Consensus 378 ---~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~ 454 (611)
.+.+++.+.++.++ ..|+|.|++..+-... . ... ..+..-.++++.+++.+++||.+- |.-.+
T Consensus 223 ~~g~~~~~~~~~a~~l~-~~Gvd~i~v~~~~~~~-~---~~~----~~~~~~~~~~~~ir~~~~iPVi~~---Ggi~s-- 288 (338)
T 1z41_A 223 DKGLDIADHIGFAKWMK-EQGVDLIDCSSGALVH-A---DIN----VFPGYQVSFAEKIREQADMATGAV---GMITD-- 288 (338)
T ss_dssp TTSCCHHHHHHHHHHHH-HTTCCEEEEECCCSSC-C---CCC----CCTTTTHHHHHHHHHHHCCEEEEC---SSCCS--
T ss_pred CCCCCHHHHHHHHHHHH-HcCCCEEEEecCcccc-C---CCC----CCccchHHHHHHHHHHCCCCEEEE---CCCCC--
Confidence 46778888888886 4699999997653210 0 000 011112455677777778887653 22111
Q ss_pred HHHHHHHHHHHcC-CCEEEEEcc
Q psy9514 455 IIHNFMPKFRDWG-ASLITLHGR 476 (611)
Q Consensus 455 ~a~~la~~l~~aG-vd~ItvhgR 476 (611)
. +.+..+.+.| +|+|.+ ||
T Consensus 289 -~-~~a~~~l~~G~aD~V~i-GR 308 (338)
T 1z41_A 289 -G-SMAEEILQNGRADLIFI-GR 308 (338)
T ss_dssp -H-HHHHHHHHTTSCSEEEE-CH
T ss_pred -H-HHHHHHHHcCCceEEee-cH
Confidence 2 2334444455 998765 44
No 391
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=84.25 E-value=7 Score=40.36 Aligned_cols=31 Identities=19% Similarity=0.417 Sum_probs=27.7
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
..+++.++||| +++.+.++.+.| ||.+.+|.
T Consensus 274 ~~v~ieaSGGI-t~~~I~~~a~tG--VD~isvGa 304 (320)
T 3paj_A 274 GRAALENSGNI-TLDNLKECAETG--VDYISVGA 304 (320)
T ss_dssp TSSEEEEESSC-CHHHHHHHHTTT--CSEEECTH
T ss_pred CCCeEEEECCC-CHHHHHHHHHcC--CCEEEECc
Confidence 46899999999 599999999887 99999995
No 392
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=84.24 E-value=5 Score=42.03 Aligned_cols=50 Identities=10% Similarity=0.168 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHH-HcCCCEEEEEccc
Q psy9514 425 ILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFR-DWGASLITLHGRT 477 (611)
Q Consensus 425 ~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~-~aGvd~ItvhgR~ 477 (611)
.++++|+.+++. +.+|..-+..+ |-..+....++.+. .+|+|+||||+-.
T Consensus 149 ~L~~~v~~lr~~-g~~VflDlK~~--DIgnTva~ya~a~~~~lgaD~vTVhp~~ 199 (353)
T 2ffc_A 149 VLKNVFDYLHHL-NVPTILDIKMN--DIGNTVKHYRKFIFDYLRSDSCTANIYM 199 (353)
T ss_dssp HHHHHHHHHHHH-TCCEEEEEEEC--CCHHHHHHHHHHHHTTSCCSEEEECCTT
T ss_pred HHHHHHHHHHHc-CCcEEEEEecC--chHHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 356777777775 88999888765 34455667777764 7999999999743
No 393
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=83.72 E-value=6.5 Score=40.31 Aligned_cols=54 Identities=13% Similarity=0.276 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhhc-CCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccc
Q psy9514 424 NILQSVITCMNEVS-SLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTR 478 (611)
Q Consensus 424 ~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r 478 (611)
.-+...++.|.... +.||++-+-.|+. +...+...++.++++|+++|+|-+...
T Consensus 65 ~em~~~~~~I~~~~~~~PviaD~d~Gyg-~~~~v~~tv~~l~~aGaagv~iEDq~~ 119 (302)
T 3fa4_A 65 NDMRANAEMISNISPSTPVIADADTGYG-GPIMVARTTEQYSRSGVAAFHIEDQVQ 119 (302)
T ss_dssp HHHHHHHHHHHTTSTTSCEEEECTTTTS-SHHHHHHHHHHHHHTTCCEEEECSBCC
T ss_pred HHHHHHHHHHHhhccCCCEEEECCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCC
Confidence 34445556666654 7999999888864 455677889999999999999987653
No 394
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=83.60 E-value=5.5 Score=41.93 Aligned_cols=38 Identities=11% Similarity=0.169 Sum_probs=31.6
Q ss_pred HHHHHHHhhCCCCcEEEecCC---CCHHHHHHHHHcCCCccEEEE
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDI---LSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI---~s~eda~~~l~~G~~aD~VmI 579 (611)
+.|+.+.+. .++|||.=| | .+++++..+.+.| +|+|.|
T Consensus 196 ~~I~~l~~~-~~~PVivK~-vg~g~s~e~A~~l~~aG--ad~I~V 236 (365)
T 3sr7_A 196 KHLSDYAKK-LQLPFILKE-VGFGMDVKTIQTAIDLG--VKTVDI 236 (365)
T ss_dssp HHHHHHHHH-CCSCEEEEE-CSSCCCHHHHHHHHHHT--CCEEEC
T ss_pred HHHHHHHHh-hCCCEEEEE-CCCCCCHHHHHHHHHcC--CCEEEE
Confidence 567777665 589999764 6 8999999999998 999988
No 395
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=83.59 E-value=8 Score=39.41 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=36.3
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
.|+..+.+..++. ++. .++.||.+|.-+. .+..+....+..+...|..-|+|.-|
T Consensus 114 IgA~~~~n~~Ll~----~~a-~~~kPV~lk~G~~--~t~~ei~~Av~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 114 LPAFLARQTDLVE----AMA-KTGAVINVKKPQF--LSPSQMGNIVEKIEECGNDKIILCDR 168 (292)
T ss_dssp ECGGGTTCHHHHH----HHH-HTTCEEEEECCTT--SCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred ECcccccCHHHHH----HHH-cCCCcEEEeCCCC--CCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 4777788887554 443 3689999985543 34456677788888889754444433
No 396
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=83.57 E-value=1 Score=46.16 Aligned_cols=85 Identities=9% Similarity=-0.032 Sum_probs=59.0
Q ss_pred hcchhhHhcCCceEEec-----cccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 507 NFMPKFRDWGASLITLH-----GRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 507 ~~~~~l~~~G~~~itih-----grtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
+++..+.+.|++.|.+. ..+..+......+.++|+++.+. +.+||++-+++...++++.+.+.| ||.|- .-
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-v~iPvl~k~~i~~ide~qil~aaG--AD~Id-~s 107 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKC-ISINVLAKVRIGHFVEAQILEELK--VDMLD-ES 107 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTT-CCSEEEEEEETTCHHHHHHHHHTT--CSEEE-EE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHh-cCCCEEEeccCCcHHHHHHHHHcC--CCEEE-cC
Confidence 45678889999999665 44444433344578999998765 599999988888899999888877 99992 22
Q ss_pred HhhhCCchHHHHHc
Q psy9514 582 GALIKPWIFQEIKE 595 (611)
Q Consensus 582 gaL~dP~lf~ei~~ 595 (611)
..+..+.+...+++
T Consensus 108 ~~~~~~~li~~i~~ 121 (297)
T 4adt_A 108 EVLTMADEYNHINK 121 (297)
T ss_dssp TTSCCSCSSCCCCG
T ss_pred CCCCHHHHHHHHHh
Confidence 22344566666655
No 397
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=83.41 E-value=18 Score=36.90 Aligned_cols=81 Identities=7% Similarity=-0.030 Sum_probs=52.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+|+|=++.+ -|-...-..+.-.++++.+.+.+ .+||.+-+ | . +..++
T Consensus 31 D~~~l~~lv~~li-~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g-~-~t~~a 95 (316)
T 3e96_A 31 DWHHYKETVDRIV-DNGIDVIVPCGN----------TSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--G-Y-ATSTA 95 (316)
T ss_dssp CHHHHHHHHHHHH-TTTCCEECTTSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--C-S-SHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCcc----------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--C-c-CHHHH
Confidence 5566667776664 358888766532 12222223333355666666555 36777765 5 3 66789
Q ss_pred HHHHHHHHHcCCCEEEEE
Q psy9514 457 HNFMPKFRDWGASLITLH 474 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvh 474 (611)
.++++.++++|+|++-+.
T Consensus 96 i~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 999999999999999875
No 398
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=83.39 E-value=6.4 Score=38.12 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=65.4
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCc
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGAS 518 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~ 518 (611)
.|+..-+|. .+.+.+.++++.+.+.|++.|.+.-++.
T Consensus 16 ~~~i~v~r~---~~~~~~~~~~~al~~gGv~~iel~~k~~---------------------------------------- 52 (214)
T 1wbh_A 16 GPVVPVIVV---KKLEHAVPMAKALVAGGVRVLNVTLRTE---------------------------------------- 52 (214)
T ss_dssp CSEEEEECC---SSGGGHHHHHHHHHHTTCCEEEEESCST----------------------------------------
T ss_pred CCEEEEEEC---CCHHHHHHHHHHHHHcCCCEEEEeCCCh----------------------------------------
Confidence 577777775 3446788999999999999988864331
Q ss_pred eEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHHH
Q psy9514 519 LITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEIK 594 (611)
Q Consensus 519 ~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei~ 594 (611)
...+.++++.+.+.. .+++.|-+.+.+++..+++.| +|+|.+| + .++.+.+..+
T Consensus 53 ----------------~~~~~i~~l~~~~~~-~~vgagtvi~~d~~~~A~~aG--Ad~v~~p-~--~d~~v~~~~~ 106 (214)
T 1wbh_A 53 ----------------CAVDAIRAIAKEVPE-AIVGAGTVLNPQQLAEVTEAG--AQFAISP-G--LTEPLLKAAT 106 (214)
T ss_dssp ----------------THHHHHHHHHHHCTT-SEEEEESCCSHHHHHHHHHHT--CSCEEES-S--CCHHHHHHHH
T ss_pred ----------------hHHHHHHHHHHHCcC-CEEeeCEEEEHHHHHHHHHcC--CCEEEcC-C--CCHHHHHHHH
Confidence 123456666666644 467778899999999999998 9999988 3 4555544433
No 399
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=83.24 E-value=13 Score=40.14 Aligned_cols=125 Identities=9% Similarity=0.056 Sum_probs=75.4
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC--Cch
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK--DNN 454 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~--~~~ 454 (611)
+.+|+.+++.|+.+.+..||..|-|..|.+ +++.-.+.|++|+++.+ . +.+++-.+. +..
T Consensus 180 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~p-d--~~L~vDaN~~w~~~ 241 (450)
T 3mzn_A 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFP-E--ARLALDPNGAWKLD 241 (450)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCT-T--SEEEEECTTCBCHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCC-C--CeEEEECCCCCCHH
Confidence 457888888877765445999998876642 12333567788888752 2 233332211 346
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++..+++.|++. +.+|- |- ..+
T Consensus 242 ~A~~~~~~L~~~-i~~iE-------eP--------------------------------------------------~~~ 263 (450)
T 3mzn_A 242 EAVRVLEPIKHL-LSYAE-------DP--------------------------------------------------CGQ 263 (450)
T ss_dssp HHHHHHGGGGGG-CSEEE-------SS--------------------------------------------------BCC
T ss_pred HHHHHHHHhhhc-cceee-------CC--------------------------------------------------CCc
Confidence 777888877765 44431 11 111
Q ss_pred cc----HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 535 AD----WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 535 a~----~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.+ ++.++++.+. .++||.+.=-+.++.++.++++.+ .+|.|++
T Consensus 264 ~d~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~di~~~ 310 (450)
T 3mzn_A 264 EGGFSGRETMAEFKKR-TGLPTATNMIATDYKQLQYAVQLN-SVDIPLA 310 (450)
T ss_dssp BTTBCHHHHHHHHHHH-HCCCEEESSSSSSHHHHHHHHHHT-CCSEEBC
T ss_pred ccccchHHHHHHHHHh-cCCCEEeCCccCCHHHHHHHHHcC-CCCEEEe
Confidence 12 3455555554 368877755677888888888876 6887754
No 400
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=83.16 E-value=21 Score=35.47 Aligned_cols=52 Identities=4% Similarity=-0.085 Sum_probs=29.7
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEcccc
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIH 450 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~ 450 (611)
-|.....+++.+....|+|+|-+|. ||+ .++++...+..+.-|+|-+.++..
T Consensus 88 I~nTv~~~a~~~~~~lg~d~vTvh~-----------~~G---------~~~l~~~~~~~~~gv~vL~~tS~~ 139 (255)
T 3qw3_A 88 IADTADAYATSAFKHLNAHAITASP-----------YMG---------SDSLQPFMRYPDKAVFVLCKTSNK 139 (255)
T ss_dssp CHHHHHHHHHHHHTTSCCSEEEECC-----------TTC---------HHHHHHHHTCTTSEEEEEEECCSG
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEcc-----------cCC---------HHHHHHHHHhhCCceEEEEeCCCc
Confidence 3444444554443346899998873 222 234455444445668888777644
No 401
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=83.15 E-value=1.4 Score=45.21 Aligned_cols=126 Identities=20% Similarity=0.328 Sum_probs=70.0
Q ss_pred HHHHHHHhhhccceeeeccCCCCcchhhccCCCcccccc---------------ccceeeeccc-CchHHHHHHHHHHHH
Q psy9514 329 TKCTQLLEEQMAVDFVDVNLGCPIEFIYKQGSGSGLLQR---------------ANLFGVQLCG-NNPYVLTKCTQLLEE 392 (611)
Q Consensus 329 ~~~a~~l~~~~~v~~idln~gcp~~~~~~~~~~~~l~~~---------------~~~~ivQi~g-~~p~~~~~aA~~l~~ 392 (611)
..+++.+.+. ++.|+||+|||......++.+..+..+ ..++++-+.. -+..+..+.|+.+.
T Consensus 74 ~~aa~~a~~~--~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~- 150 (318)
T 1vhn_A 74 SEAARILSEK--YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILV- 150 (318)
T ss_dssp HHHHHHHTTT--CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHH-
T ss_pred HHHHHHHHHh--CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHH-
Confidence 3455555553 899999999999765544444433211 2466666543 23222225555554
Q ss_pred hcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 393 QMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 393 ~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
..|+|+|.++.+... +++.+. .+. +++..+++ ++||.+- | +......+.+.++..|+|+|.
T Consensus 151 ~~G~d~i~v~g~~~~-----~~~~~~--~~~----~~i~~i~~--~ipVi~~---G---gI~s~~da~~~l~~~gad~V~ 211 (318)
T 1vhn_A 151 EEGVDEVFIHTRTVV-----QSFTGR--AEW----KALSVLEK--RIPTFVS---G---DIFTPEDAKRALEESGCDGLL 211 (318)
T ss_dssp HTTCCEEEEESSCTT-----TTTSSC--CCG----GGGGGSCC--SSCEEEE---S---SCCSHHHHHHHHHHHCCSEEE
T ss_pred HhCCCEEEEcCCCcc-----ccCCCC--cCH----HHHHHHHc--CCeEEEE---C---CcCCHHHHHHHHHcCCCCEEE
Confidence 469999999865431 222111 111 33444544 6787653 2 112234555566668999986
Q ss_pred EEccc
Q psy9514 473 LHGRT 477 (611)
Q Consensus 473 vhgR~ 477 (611)
+ ||.
T Consensus 212 i-GR~ 215 (318)
T 1vhn_A 212 V-ARG 215 (318)
T ss_dssp E-SGG
T ss_pred E-CHH
Confidence 5 553
No 402
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=82.97 E-value=3.8 Score=41.04 Aligned_cols=54 Identities=17% Similarity=0.313 Sum_probs=36.7
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEE
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKT 445 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKi 445 (611)
+++.+.+.|+.+. ..|.|.||||+|- ......+.+.+++..+...+++||+|-.
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~g~------------~~v~~~ee~~rvv~~i~~~~~~pisIDT 76 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNVGP------------AVQDKVSAMEWLVEVTQEVSNLTLCLDS 76 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECCCC------------CCCChHHHHHHHHHHHHHhCCCeEEEeC
Confidence 4556666666554 3599999999743 2334567788888888877788988863
No 403
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=82.87 E-value=3.2 Score=41.57 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=42.5
Q ss_pred cccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 419 LLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 419 Ll~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
..-..+-+...++.|.+.++.||++-+-.|+... . .+.++++.++|+++|.|-+..
T Consensus 61 ~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~-~--~~~~~~l~~aGa~gv~iEd~~ 116 (255)
T 2qiw_A 61 ENMNFADYMAVVKKITSAVSIPVSVDVESGYGLS-P--ADLIAQILEAGAVGINVEDVV 116 (255)
T ss_dssp TCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCC-H--HHHHHHHHHTTCCEEEECSEE
T ss_pred CCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcH-H--HHHHHHHHHcCCcEEEECCCC
Confidence 3445556667777777778899999988885333 3 778888889999999997764
No 404
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=82.77 E-value=8.6 Score=40.35 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=30.4
Q ss_pred ccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 535 ADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 535 a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.+++.++++.+. .++||.+-=.+.+..++.++++.+ .+|.|++
T Consensus 239 ~d~~~~~~l~~~-~~ipIa~dE~~~~~~~~~~~i~~~-a~d~i~i 281 (386)
T 1wue_A 239 DDFLDHAQLQRE-LKTRICLDENIRSLKDCQVALALG-SCRSINL 281 (386)
T ss_dssp TCSHHHHHHHTT-CSSCEEECTTCCSHHHHHHHHHHT-CCSEEEE
T ss_pred ccHHHHHHHHHh-cCCCEEeCCccCCHHHHHHHHHcC-CCCEEEE
Confidence 345556665544 478888777788888888888776 6777776
No 405
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=82.76 E-value=30 Score=34.77 Aligned_cols=83 Identities=11% Similarity=0.037 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+ -|-...-..+.-.++++.+.+.+ .+||.+-+ |. .+..++
T Consensus 19 D~~~l~~lv~~li~-~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~-~~t~~a 84 (292)
T 2vc6_A 19 DEVALHDLVEWQIE-EGSFGLVPCGT----------TGESPTLSKSEHEQVVEITIKTANGRVPVIAGA--GS-NSTAEA 84 (292)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEETTSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CC-ccHHHH
Confidence 56667777776643 48888776532 12222223333355666666554 37877653 32 244678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 9999999999999988764
No 406
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=82.65 E-value=11 Score=40.87 Aligned_cols=125 Identities=6% Similarity=-0.002 Sum_probs=76.0
Q ss_pred cCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccC--Cch
Q psy9514 377 GNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHK--DNN 454 (611)
Q Consensus 377 g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~--~~~ 454 (611)
+.+++.+++.|+.+.+..||..|-|..|.+ +++.-.+.|++|+++.+ .+ .+++-.+. +..
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~p-d~--~L~vDaN~~w~~~ 259 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFP-HA--RVTLDPNGAWSLN 259 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCT-TS--EEEEECTTBBCHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCC-CC--eEEeeCCCCCCHH
Confidence 457888888877654435999998876642 12233566788888762 22 33332211 345
Q ss_pred HHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCC
Q psy9514 455 IIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ 534 (611)
Q Consensus 455 ~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~ 534 (611)
++..+++.|++. +.+|- |- ..+
T Consensus 260 ~Ai~~~~~Le~~-l~~iE-------eP--------------------------------------------------~~~ 281 (470)
T 3p0w_A 260 EAIALCKGQGHL-VAYAE-------DP--------------------------------------------------CGP 281 (470)
T ss_dssp HHHHHHTTCTTT-CSEEE-------SC--------------------------------------------------BCC
T ss_pred HHHHHHHhcccc-ceeec-------CC--------------------------------------------------CCh
Confidence 677777777654 44321 11 111
Q ss_pred cc----HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 535 AD----WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 535 a~----~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.+ ++.++++.+. .++||.+.=.+.++.++.++++.+ .+|.|++
T Consensus 282 ~d~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~l~~~-a~div~~ 328 (470)
T 3p0w_A 282 EAGYSGREVMAEFKRA-TGIPTATNMIATDWRQMGHAVQLH-AVDIPLA 328 (470)
T ss_dssp BTTBCHHHHHHHHHHH-HCCCEEESSSSCSHHHHHHHHHTT-CCSEEBC
T ss_pred hhccchHHHHHHHHhc-CCCCEEeCCccCCHHHHHHHHHcC-CCCEEEe
Confidence 22 3555665554 368888755677888888888887 6887764
No 407
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=81.97 E-value=1.6 Score=44.95 Aligned_cols=86 Identities=16% Similarity=0.068 Sum_probs=53.7
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~------------------------------------------------L 62 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYA------------------------------------------------L 62 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhh------------------------------------------------C
Confidence 3355778888899999999988887755320 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|. .+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 63 s~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~G--adavlv~~P~y~~~s 121 (314)
T 3d0c_A 63 TIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSG--ADCVMIHQPVHPYIT 121 (314)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTT--CSEEEECCCCCSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcC--CCEEEECCCCCCCCC
Confidence 1111123333333332 468987 7888 554443322 2345 999999999888884
No 408
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=81.78 E-value=24 Score=36.14 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=28.3
Q ss_pred HHHHhhCCCCcEEEecCCC--CHHHHHHH----HHcCCCccEEEEcHHhhh
Q psy9514 541 EKCAQLCSPAPLYGNGDIL--SYEDYTES----LKKSPSISGVMIGRGALI 585 (611)
Q Consensus 541 ~~~~k~~~~iPVIgnGgI~--s~eda~~~----l~~G~~aD~VmIGRgaL~ 585 (611)
+++.+.. .+||+..||=. +.+++.+. ++.. ++.||.+||-++-
T Consensus 230 ~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v~~A~~~a-Ga~Gv~vGRNIfQ 278 (307)
T 3fok_A 230 ERVMEST-TMPTLLLGGEGGNDPDATFASWEHALTLP-GVRGLTVGRTLLY 278 (307)
T ss_dssp HHHGGGC-SSCEEEECCSCC--CHHHHHHHHHHTTST-TEEEEEECTTTSS
T ss_pred HHHHHhC-CCCEEEeCCCCCCCHHHHHHHHHHHHHhC-CCeEEeechhhcc
Confidence 4555544 78987666544 55665544 4423 4999999999998
No 409
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=81.77 E-value=9.1 Score=39.32 Aligned_cols=55 Identities=9% Similarity=0.140 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcccc
Q psy9514 423 ANILQSVITCMNEVSS--LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTR 478 (611)
Q Consensus 423 ~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r 478 (611)
.+-+...++.|..... .||++-+-.|+. +...+.+.++.++++|+++|+|-+...
T Consensus 71 ~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~ 127 (307)
T 3lye_A 71 LHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVARTVEHYIRSGVAGAHLEDQIL 127 (307)
T ss_dssp HHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHHHHHHHHHTTCCEEEECCBCC
T ss_pred HHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 4445556666666654 899999888864 455677889999999999999987653
No 410
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=81.77 E-value=9.2 Score=38.04 Aligned_cols=119 Identities=13% Similarity=0.037 Sum_probs=63.8
Q ss_pred HHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccC-cChhHHHHHhhhcccCchh
Q psy9514 426 LQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ-ADWDYIEKCAQLCSRDNNI 504 (611)
Q Consensus 426 l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~-adw~~i~~~~~~~~~~~~~ 504 (611)
+.+.++..++.-...+..-+-.| +.+.+.+.++++.|.++|+|+|-|-.=. +.| +|...|.....
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g-~p~~~~~~~~~~~l~~~G~D~IElG~P~-----sdP~adgp~i~~a~~-------- 69 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVG-YPDYETSLKAFKEVLKNGTDILEIGFPF-----SDPVADGPTIQVAHE-------- 69 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETT-SSCHHHHHHHHHHHHHTTCSEEEEECCC-----SCCTTSCHHHHHHHH--------
T ss_pred HHHHHHHHHhcCCceEEEEecCC-CCChHHHHHHHHHHHHcCCCEEEECCCC-----CCcccccHHHHHHHH--------
Confidence 44555555443223333333344 4666788999999999999999983321 111 23333332211
Q ss_pred hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCC------HHHHHHHHHcCCCccEEE
Q psy9514 505 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILS------YEDYTESLKKSPSISGVM 578 (611)
Q Consensus 505 ~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s------~eda~~~l~~G~~aD~Vm 578 (611)
..-..|. +-..-++.++++.+..+++||+..|..+. ...+..+.+.| +|+|.
T Consensus 70 ------~al~~G~--------------~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG--~dgvi 127 (262)
T 2ekc_A 70 ------VALKNGI--------------RFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKG--IDGFI 127 (262)
T ss_dssp ------HHHHTTC--------------CHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTT--CCEEE
T ss_pred ------HHHHcCC--------------CHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcC--CCEEE
Confidence 1111111 00112355666665533899998754321 23445566666 99999
Q ss_pred Ec
Q psy9514 579 IG 580 (611)
Q Consensus 579 IG 580 (611)
+.
T Consensus 128 i~ 129 (262)
T 2ekc_A 128 VP 129 (262)
T ss_dssp CT
T ss_pred EC
Confidence 85
No 411
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=81.66 E-value=5.6 Score=41.65 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=36.0
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL 473 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv 473 (611)
.|+..+++..++.++- .++.||.+|.-+ ..+..+....+..+...|..-|++
T Consensus 195 IgAr~~~n~~LL~~va-----~~~kPVilk~G~--~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 195 IGARNAQNFRLLSKAG-----SYNKPVLLKRGF--MNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp ECGGGTTCHHHHHHHH-----TTCSCEEEECCT--TCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ECcccccCHHHHHHHH-----ccCCcEEEcCCC--CCCHHHHHHHHHHHHHCCCCeEEE
Confidence 4778888888876554 368999988444 334566677777788888744444
No 412
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=81.14 E-value=14 Score=36.49 Aligned_cols=126 Identities=13% Similarity=0.022 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc-Cch---hhhhcchhhHhcCCceEEecccccc-
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR-DNN---IIHNFMPKFRDWGASLITLHGRTRE- 528 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~-~~~---~~~~~~~~l~~~G~~~itihgrtr~- 528 (611)
++....+...+.+|++.||||-|.-. | .-.-.-+..+..+++. .|. .+.+++....+.-.+.+|+-.=.++
T Consensus 25 Pdpv~aA~~ae~aGAdgITvHlReDr-R---HI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ia~~~kP~~vtLVPE~r~e 100 (243)
T 1m5w_A 25 PDPVQAAFIAEQAGADGITVHLREDR-R---HITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQE 100 (243)
T ss_dssp SCHHHHHHHHHTTTCSEEEEECCTTC-S---SSCHHHHHHHHHHCSSEEEEEECSSHHHHHHHHHHCCSEEEECCCCSSC
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCc-c---cCCHHHHHHHHHhcCCCEEeccCCCHHHHHHHHHcCCCEEEECCCCCCC
Confidence 45677888889999999999998521 1 1112234455555542 222 2456778888888999998555444
Q ss_pred ----ccccCCccHHHHHHHHhhC--CCCc--EEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 529 ----QRYTKQADWDYIEKCAQLC--SPAP--LYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 529 ----g~~~~~a~~~~i~~~~k~~--~~iP--VIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+++.-..+.+.+..+++.. ..|. ++.. -+++.++...+.| +|.|-+=+|.|.+-+
T Consensus 101 ~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFID---pd~~qi~aA~~~G--A~~IELhTG~Ya~a~ 163 (243)
T 1m5w_A 101 VTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFID---ADEEQIKAAAEVG--APFIEIHTGCYADAK 163 (243)
T ss_dssp SSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEEC---SCHHHHHHHHHTT--CSEEEEECHHHHHCC
T ss_pred cCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHhC--cCEEEEechhhhcCC
Confidence 3333334555555544322 2344 4443 4688999999987 999999999999864
No 413
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=81.08 E-value=48 Score=34.52 Aligned_cols=186 Identities=7% Similarity=-0.041 Sum_probs=0.0
Q ss_pred eeeecccC---chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccc---------------cChHHHHHHHHH
Q psy9514 371 FGVQLCGN---NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLL---------------QRANILQSVITC 432 (611)
Q Consensus 371 ~ivQi~g~---~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl---------------~r~~~l~eIv~a 432 (611)
+++.++.| +.+.+.+.++.++ .+|+|+|-...-.|-..+.... +.+. .=+..-.+.+..
T Consensus 22 iIAe~g~NH~gs~e~a~~li~~ak-~aGadavKfq~~k~~tl~s~~~--~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~ 98 (349)
T 2wqp_A 22 IICEIGINHEGSLKTAFEMVDAAY-NAGAEVVKHQTHIVEDEMSDEA--KQVIPGNADVSIYEIMERCALNEEDEIKLKE 98 (349)
T ss_dssp EEEEEETTTTTCHHHHHHHHHHHH-HHTCSEEEEEECCHHHHCCGGG--GGCCCTTCSSCHHHHHHHHCCCHHHHHHHHH
T ss_pred EEEecCCcccCCHHHHHHHHHHHH-HhCCCEEeeeecccccccCcch--hccccCCCCccHHHHHHHhCCCHHHHHHHHH
Q ss_pred HHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhccc--------Cchh
Q psy9514 433 MNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSR--------DNNI 504 (611)
Q Consensus 433 v~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~--------~~~~ 504 (611)
..+..|+++..- ..-..-+..|++.|++++-|-.|.-+ ++..+..++..=+- .-+.
T Consensus 99 ~~~~~Gi~~~st---------~~d~~svd~l~~~~v~~~KI~S~~~~-------n~~LL~~va~~gkPviLstGmat~~E 162 (349)
T 2wqp_A 99 YVESKGMIFIST---------LFSRAAALRLQRMDIPAYKIGSGECN-------NYPLIKLVASFGKPIILSTGMNSIES 162 (349)
T ss_dssp HHHHTTCEEEEE---------ECSHHHHHHHHHHTCSCEEECGGGTT-------CHHHHHHHHTTCSCEEEECTTCCHHH
T ss_pred HHHHhCCeEEEe---------eCCHHHHHHHHhcCCCEEEECccccc-------CHHHHHHHHhcCCeEEEECCCCCHHH
Q ss_pred hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEE
Q psy9514 505 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGV 577 (611)
Q Consensus 505 ~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~V 577 (611)
+...+..+...|.+.+.+|+.+..+......|+..|..+.+.+.++||.-.+--....-+..++..| ||.|
T Consensus 163 i~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlG--A~iI 233 (349)
T 2wqp_A 163 IKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALG--GSIL 233 (349)
T ss_dssp HHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHT--CCEE
T ss_pred HHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhC--CCEE
No 414
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=81.05 E-value=9.5 Score=39.29 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=64.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccc-------cccChHHHHHHHHHHHhhcCCCEEEEEEccccC
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSG-------LLQRANILQSVITCMNEVSSLPITVKTRTGIHK 451 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gsa-------Ll~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~ 451 (611)
+++.+.+-|+.+. ..|+|.|||++-.. +- |+. ..+..+.+..+|+++++..++||+|-..
T Consensus 47 ~~~~al~~A~~~v-~~GAdIIDIGgeST-----rP--ga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~----- 113 (314)
T 3tr9_A 47 DLNSALRTAEKMV-DEGADILDIGGEAT-----NP--FVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTS----- 113 (314)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEECCCS-----CT--TC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECS-----
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCCC-----CC--CcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCC-----
Confidence 5666666666654 35999999996321 11 222 2334556777888888878889888522
Q ss_pred CchHHHHHHHHHHHcCCCEEEE-EccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITL-HGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~Itv-hgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
+ .+.+++..++|++.|.= +|.. ...+.+.+.+.|+..+.+|-+
T Consensus 114 ~----~~Va~aAl~aGa~iINDVsg~~---------------------------~~~m~~v~a~~g~~vVlMh~~ 157 (314)
T 3tr9_A 114 R----PRVMREAVNTGADMINDQRALQ---------------------------LDDALTTVSALKTPVCLMHFP 157 (314)
T ss_dssp C----HHHHHHHHHHTCCEEEETTTTC---------------------------STTHHHHHHHHTCCEEEECCC
T ss_pred C----HHHHHHHHHcCCCEEEECCCCC---------------------------chHHHHHHHHhCCeEEEECCC
Confidence 1 24556666679998752 2221 124566777889999988855
No 415
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=81.04 E-value=21 Score=36.00 Aligned_cols=82 Identities=16% Similarity=0.196 Sum_probs=51.9
Q ss_pred HhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCC-EEEEEEcccc-CCchHHHHHHHHHHHcCCC
Q psy9514 392 EQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLP-ITVKTRTGIH-KDNNIIHNFMPKFRDWGAS 469 (611)
Q Consensus 392 ~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~P-vtVKiR~g~~-~~~~~a~~la~~l~~aGvd 469 (611)
+.+|||+| | .|--..+ ...|+-..+.-..+.+...+++|.+.+..| |++-+-.|.. .+...+.+-+.+|.++|++
T Consensus 34 e~aG~d~i-l-vGdSl~~-~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~kaGa~ 110 (275)
T 1o66_A 34 DDAGVEML-L-VGDSLGM-AVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAELMAAGAH 110 (275)
T ss_dssp HHTTCCEE-E-ECTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHHHHHTTCS
T ss_pred HHcCCCEE-E-ECHHHHH-HHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHHHHHcCCc
Confidence 34699998 4 2322221 234444445555666777777888877765 4444333222 3456778888888889999
Q ss_pred EEEEEcc
Q psy9514 470 LITLHGR 476 (611)
Q Consensus 470 ~ItvhgR 476 (611)
+|.+-+.
T Consensus 111 aVklEdg 117 (275)
T 1o66_A 111 MVKLEGG 117 (275)
T ss_dssp EEEEECS
T ss_pred EEEECCc
Confidence 9999876
No 416
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=81.01 E-value=42 Score=34.00 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=52.3
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+- +|. .+..++
T Consensus 30 D~~~l~~lv~~li~-~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaG--vg~-~~t~~a 95 (303)
T 2wkj_A 30 DKASLRRLVQFNIQ-QGIDGLYVGGST----------GEAFVQSLSEREQVLEIVAEEAKGKIKLIAH--VGC-VSTAES 95 (303)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE--CCC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECeec----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--cCC-CCHHHH
Confidence 55666677776643 589998776432 22222233333556666655553 676664 332 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecC
Confidence 9999999999999988764
No 417
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=80.79 E-value=47 Score=33.35 Aligned_cols=84 Identities=11% Similarity=0.094 Sum_probs=53.2
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+..|+++|=++.+ -|-...-..+.-.++++.+.+.++ +||.+- +|. .+..++
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~-~~t~~a 88 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGS----------TGENFMLSTEEKKEIFRIAKDEAKDQIALIAQ--VGS-VNLKEA 88 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE--CCC-SCHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe--cCC-CCHHHH
Confidence 55667777777653258899877532 122222233334566666665553 666654 333 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 89 i~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 89 VELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 418
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=80.76 E-value=30 Score=36.57 Aligned_cols=188 Identities=10% Similarity=-0.007 Sum_probs=106.8
Q ss_pred ceeeecccC---chHHHHHHHHHHHHhcccceEEeccCCCccc--------eecccccccc---cc----ChHHHHHHHH
Q psy9514 370 LFGVQLCGN---NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEF--------IYKQGSGSGL---LQ----RANILQSVIT 431 (611)
Q Consensus 370 ~~ivQi~g~---~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~--------v~~~g~GsaL---l~----r~~~l~eIv~ 431 (611)
.+|+.++.| +.+.+.+.++.++ .+|+|+|-...-.|-.. ....++|..+ .+ ..+.+ +.+.
T Consensus 30 ~IIAEiG~NH~Gsle~A~~li~~Ak-~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~-~~L~ 107 (385)
T 1vli_A 30 FIIAEAGINHDGKLDQAFALIDAAA-EAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWI-LPLL 107 (385)
T ss_dssp EEEEEEETTTTTCHHHHHHHHHHHH-HHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGH-HHHH
T ss_pred EEEEeecCcccccHHHHHHHHHHHH-HhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHH-HHHH
Confidence 356667655 6667777776665 46999999876665331 1111223222 11 22333 4444
Q ss_pred HHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhh-----cccCc---h
Q psy9514 432 CMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQL-----CSRDN---N 503 (611)
Q Consensus 432 av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~-----~~~~~---~ 503 (611)
...+..|+++..- .-.. .-+..|++.|++++-|-.|.-+ ++..+..++.. ++..- .
T Consensus 108 ~~~~~~Gi~~~st------pfD~---~svd~l~~~~vd~~KIgS~~~~-------N~pLL~~va~~gKPViLStGmaTl~ 171 (385)
T 1vli_A 108 DYCREKQVIFLST------VCDE---GSADLLQSTSPSAFKIASYEIN-------HLPLLKYVARLNRPMIFSTAGAEIS 171 (385)
T ss_dssp HHHHHTTCEEECB------CCSH---HHHHHHHTTCCSCEEECGGGTT-------CHHHHHHHHTTCSCEEEECTTCCHH
T ss_pred HHHHHcCCcEEEc------cCCH---HHHHHHHhcCCCEEEECccccc-------CHHHHHHHHhcCCeEEEECCCCCHH
Confidence 4555567776432 1112 3345667789999888766432 66777777764 11111 1
Q ss_pred hhhhcchhhHhcCC-ceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCC-HHHHHHHHHcCCCccEE
Q psy9514 504 IIHNFMPKFRDWGA-SLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILS-YEDYTESLKKSPSISGV 577 (611)
Q Consensus 504 ~~~~~~~~l~~~G~-~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s-~eda~~~l~~G~~aD~V 577 (611)
.+...+..+...|. +.+.+|+.+..+......|+..|..+.+.+..+||.-.+--.. ..-+..++..| |+.|
T Consensus 172 Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~G~~~~~~AAvAlG--A~iI 245 (385)
T 1vli_A 172 DVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLG--AKLI 245 (385)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTT--CSEE
T ss_pred HHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCCCchHHHHHHHHcC--CCEE
Confidence 12234556777787 5556676555443333457777887766554789876655445 67777788887 7733
No 419
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=80.58 E-value=7.6 Score=39.52 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=27.5
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcH
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGR 581 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGR 581 (611)
..+++.++||| +++.+.++.+.| +|.+.+|.
T Consensus 241 ~~v~ieaSGGI-t~~~i~~~a~tG--VD~IsvGa 271 (287)
T 3tqv_A 241 GKVALEVSGNI-DRNSIVAIAKTG--VDFISVGA 271 (287)
T ss_dssp TTCEEEEESSC-CTTTHHHHHTTT--CSEEECSH
T ss_pred CCceEEEECCC-CHHHHHHHHHcC--CCEEEECh
Confidence 36899999999 799999999887 99999984
No 420
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=80.49 E-value=40 Score=34.68 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+-+ |. .+..++
T Consensus 53 D~~~l~~lv~~li~-~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv--g~-~st~ea 118 (332)
T 2r8w_A 53 DIEAFSALIARLDA-AEVDSVGILGST----------GIYMYLTREERRRAIEAAATILRGRRTLMAGI--GA-LRTDEA 118 (332)
T ss_dssp CHHHHHHHHHHHHH-HTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CC-CCHHHH
Confidence 55666676666543 489998776422 22222233333566666665553 6776653 32 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 119 i~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999987754
No 421
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=80.48 E-value=46 Score=33.61 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 31 D~~~l~~lv~~li~-~Gv~gl~v~GtT----------GE~~~Ls~eEr~~v~~~~~~~~~grvpViaG--vg~-~~t~~a 96 (301)
T 1xky_A 31 DFAKTTKLVNYLID-NGTTAIVVGGTT----------GESPTLTSEEKVALYRHVVSVVDKRVPVIAG--TGS-NNTHAS 96 (301)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCC-SCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCceEEeC--CCC-CCHHHH
Confidence 55667777776643 489998776432 2222223333355666665554 3677765 332 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 9999999999999988764
No 422
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=80.45 E-value=16 Score=34.92 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=71.3
Q ss_pred CCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCch-----hhhhcchhhH
Q psy9514 439 LPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNN-----IIHNFMPKFR 513 (611)
Q Consensus 439 ~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~-----~~~~~~~~l~ 513 (611)
.||+.-+|.. +.+.+.++++++.+.|+++|.+.-++... -+.|..+.+ ++... ...+.++...
T Consensus 13 ~~ii~vi~~~---~~~~~~~~~~~l~~gGv~~iel~~k~~~~-------~~~i~~~~~--~~~~~gag~vl~~d~~~~A~ 80 (207)
T 2yw3_A 13 SRLLPLLTVR---GGEDLLGLARVLEEEGVGALEITLRTEKG-------LEALKALRK--SGLLLGAGTVRSPKEAEAAL 80 (207)
T ss_dssp HCEEEEECCC---SCCCHHHHHHHHHHTTCCEEEEECSSTHH-------HHHHHHHTT--SSCEEEEESCCSHHHHHHHH
T ss_pred CCEEEEEeCC---CHHHHHHHHHHHHHcCCCEEEEeCCChHH-------HHHHHHHhC--CCCEEEeCeEeeHHHHHHHH
Confidence 4777777753 33467889999999999999886544221 122333332 11100 1224556677
Q ss_pred hcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 514 DWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 514 ~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+.|++.+.. +..+...+..+.. . ++|+|- | +.|++++.++.+.| +|.|.+
T Consensus 81 ~~GAd~v~~----------~~~d~~v~~~~~~-~-g~~~i~-G-~~t~~e~~~A~~~G--ad~v~~ 130 (207)
T 2yw3_A 81 EAGAAFLVS----------PGLLEEVAALAQA-R-GVPYLP-G-VLTPTEVERALALG--LSALKF 130 (207)
T ss_dssp HHTCSEEEE----------SSCCHHHHHHHHH-H-TCCEEE-E-ECSHHHHHHHHHTT--CCEEEE
T ss_pred HcCCCEEEc----------CCCCHHHHHHHHH-h-CCCEEe-c-CCCHHHHHHHHHCC--CCEEEE
Confidence 789998753 2234444444433 2 567664 2 89999999999987 999988
No 423
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=80.29 E-value=4.4 Score=43.96 Aligned_cols=117 Identities=10% Similarity=-0.014 Sum_probs=71.1
Q ss_pred cccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 394 MVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 394 ~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.||..+-|..+-.- . .|. .+++.-.+.|++|++++|. ++.|-.-.++ +...+.+++++|++.++.+|
T Consensus 179 ~Gf~~~KlKv~~~~--~----~G~---~~~~~di~rv~avRea~G~d~~L~vDaN~~w--t~~~Ai~~~~~Le~~~l~~i 247 (455)
T 3fxg_A 179 MGFWGGKVPLPFCP--D----DGH---EGLRKNVEFLRKHREAVGPDFPIMVDCYMSL--NVSYTIELVKACLDLNINWW 247 (455)
T ss_dssp HTCSCEEEECCCCG--G----GHH---HHHHHHHHHHHHHHHHHCSSSCEEEECTTCC--CHHHHHHHHHHTGGGCCSEE
T ss_pred cCCCEEEEcCCCCc--c----ccc---ccHHHHHHHHHHHHHHhCCCCeEEEeCCCCC--CHHHHHHHHHhcccCCccee
Confidence 38888887654210 0 011 2345566778899998864 4444322233 34678899999998887664
Q ss_pred EEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCc
Q psy9514 472 TLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAP 551 (611)
Q Consensus 472 tvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iP 551 (611)
- | -..+.+++.++++.+....+|
T Consensus 248 E-------E--------------------------------------------------Pl~~dd~~~la~L~~~~~~iP 270 (455)
T 3fxg_A 248 E-------E--------------------------------------------------CLSPDDTDGFALIKRAHPTVK 270 (455)
T ss_dssp E-------C--------------------------------------------------CSCGGGGGGHHHHHHHCTTSE
T ss_pred c-------C--------------------------------------------------CCCcchHHHHHHHHHhCCCCe
Confidence 2 1 111223444555555443466
Q ss_pred EEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 552 LYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 552 VIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
|.+.=.++|..++.++++.+ .+|.|++
T Consensus 271 IA~gEs~~s~~d~~~li~~~-avDiiq~ 297 (455)
T 3fxg_A 271 FTTGEHEYSRYGFRKLVEGR-NLDIIQP 297 (455)
T ss_dssp EEECTTCCHHHHHHHHHTTC-CCSEECC
T ss_pred EECCCccCCHHHHHHHHHcC-CCCEEEE
Confidence 66655678888888888776 6887775
No 424
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=80.23 E-value=44 Score=33.75 Aligned_cols=83 Identities=11% Similarity=0.006 Sum_probs=52.7
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC---CCEEEEEEccccCCchH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS---LPITVKTRTGIHKDNNI 455 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~---~PvtVKiR~g~~~~~~~ 455 (611)
+.+.+.+.++.+. ..|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+- +|. .+..+
T Consensus 26 D~~~l~~lv~~li-~~Gv~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG--vg~-~~t~~ 91 (301)
T 3m5v_A 26 DEQSYARLIKRQI-ENGIDAVVPVGTT----------GESATLTHEEHRTCIEIAVETCKGTKVKVLAG--AGS-NATHE 91 (301)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEECSSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE--CCC-SSHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe--CCC-CCHHH
Confidence 5666777777664 3589998776432 22222233333556666655542 566654 443 34578
Q ss_pred HHHHHHHHHHcCCCEEEEEc
Q psy9514 456 IHNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 456 a~~la~~l~~aGvd~Itvhg 475 (611)
+.++++.+++.|+|++-+..
T Consensus 92 ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 99999999999999998864
No 425
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=80.20 E-value=7.1 Score=38.93 Aligned_cols=126 Identities=10% Similarity=0.023 Sum_probs=67.0
Q ss_pred HHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccC-cChhHHHHHhhhcccCchh
Q psy9514 426 LQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ-ADWDYIEKCAQLCSRDNNI 504 (611)
Q Consensus 426 l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~-adw~~i~~~~~~~~~~~~~ 504 (611)
+.+.++..++.-...+..-+ +..+.+.+.+.++++.|+++|+|+|.+-.-. +.| +|...|.....
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i-~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~-----sdp~~DG~~i~~a~~-------- 69 (268)
T 1qop_A 4 YENLFAQLNDRREGAFVPFV-TLGDPGIEQSLKIIDTLIDAGADALELGVPF-----SDPLADGPTIQNANL-------- 69 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEE-ETTSSCHHHHHHHHHHHHHTTCSSEEEECCC-----SCCTTCCHHHHHHHH--------
T ss_pred HHHHHHHHHhcCCceEEEEe-eCCCCCHHHHHHHHHHHHHCCCCEEEECCCC-----CCccCCCHHHHHHHH--------
Confidence 44455554433222333333 3344556788999999999999999984322 112 23333332111
Q ss_pred hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCC-----C-HHHHHHHHHcCCCccEEE
Q psy9514 505 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDIL-----S-YEDYTESLKKSPSISGVM 578 (611)
Q Consensus 505 ~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~-----s-~eda~~~l~~G~~aD~Vm 578 (611)
..-..|.. -..-++.++++.+..+++||+..+..+ . ...+..+.+.| +|+|.
T Consensus 70 ------~al~~G~~--------------~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aG--adgii 127 (268)
T 1qop_A 70 ------RAFAAGVT--------------PAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVG--VDSVL 127 (268)
T ss_dssp ------HHHHTTCC--------------HHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHT--CCEEE
T ss_pred ------HHHHcCCC--------------HHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcC--CCEEE
Confidence 11111110 001235566766553688988754221 1 35556667776 99999
Q ss_pred EcHHhhhCC
Q psy9514 579 IGRGALIKP 587 (611)
Q Consensus 579 IGRgaL~dP 587 (611)
+.-..+...
T Consensus 128 ~~d~~~e~~ 136 (268)
T 1qop_A 128 VADVPVEES 136 (268)
T ss_dssp ETTCCGGGC
T ss_pred EcCCCHHHH
Confidence 875544433
No 426
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=80.16 E-value=5 Score=41.17 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=23.1
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQ 480 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~q 480 (611)
+.+...++++.+.+.|++.|.+-|.+.+.
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~ 55 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGEA 55 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGTG
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcCh
Confidence 33567788899999999999998887653
No 427
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=80.08 E-value=19 Score=36.12 Aligned_cols=126 Identities=12% Similarity=0.047 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC-ch---hhhhcchhhHhcCCceEEeccccccc
Q psy9514 454 NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD-NN---IIHNFMPKFRDWGASLITLHGRTREQ 529 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~-~~---~~~~~~~~l~~~G~~~itihgrtr~g 529 (611)
++....+...+.+|++.||||-|.-. | .-.-.-+..+..+++.. |. .+.+++....+.-.+.+|+-.=.+++
T Consensus 53 PDpv~aA~~ae~aGAdGITvHlReDr-R---HI~d~Dv~~L~~~i~t~lNlEma~t~emi~ial~~kP~~vtLVPEkreE 128 (278)
T 3gk0_A 53 PDPVRAALAAEDAGADAITLHLREDR-R---HIVDADVRTLRPRVKTRMNLECAVTPEMLDIACEIRPHDACLVPEKRSE 128 (278)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCTTC-S---SSCHHHHHHHHHHCSSCEEEEECSSHHHHHHHHHHCCSEEEECCCSGGG
T ss_pred CCHHHHHHHHHHcCCCEEEeccCCCc-c---cCCHHHHHHHHHHcCCCEEeecCCCHHHHHHHHHcCCCEEEECCCCCCC
Confidence 45678888889999999999998521 1 11122345555555432 22 25578888888899999986555543
Q ss_pred -----cccCCccHHHHHHHHhhC--CCC--cEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhhCCc
Q psy9514 530 -----RYTKQADWDYIEKCAQLC--SPA--PLYGNGDILSYEDYTESLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 530 -----~~~~~a~~~~i~~~~k~~--~~i--PVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
++.-..+.+.+..+++.. ..| .++.. -+++.++...+.| +|.|-+=+|.|++-+
T Consensus 129 ~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID---pd~~qI~aA~~~G--Ad~IELhTG~YA~a~ 191 (278)
T 3gk0_A 129 LTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID---PDEAQIRAAHETG--APVIELHTGRYADAH 191 (278)
T ss_dssp BCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC---SCHHHHHHHHHHT--CSEEEECCHHHHTCS
T ss_pred cCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHhC--cCEEEEecchhhccC
Confidence 333333445555444322 133 44443 4678888888987 999999999999854
No 428
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=79.83 E-value=9.7 Score=40.52 Aligned_cols=117 Identities=13% Similarity=0.041 Sum_probs=73.7
Q ss_pred cccceEEeccCC-CccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE
Q psy9514 394 MVVDFVDVNLGC-PIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT 472 (611)
Q Consensus 394 ~g~D~IELN~gC-P~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It 472 (611)
.||..+-|..+- |. .|. ..++.-.+.|++|++++|..+.+.+=....=+..++.+++++|++.++.+|-
T Consensus 173 ~Gf~~~K~Kv~~g~~-------~g~---~~~~~di~~v~avRea~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~iE 242 (404)
T 3ekg_A 173 MGFIGGKMPLHHGPS-------EGE---EGLKKNLEELATMRERVGPDFWLMFDCWMSLDLNYATRLARGAREYGLKWIE 242 (404)
T ss_dssp TTCSEEEEECCCCGG-------GHH---HHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEE
T ss_pred cCCCEEEEecCCCCc-------ccc---ccHHHHHHHHHHHHHHhCCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcEEe
Confidence 489988886532 20 011 1234567788999998865544333222222446788999999998877652
Q ss_pred EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcE
Q psy9514 473 LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPL 552 (611)
Q Consensus 473 vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPV 552 (611)
| -..+.+++.++++.+.. ++||
T Consensus 243 -------e--------------------------------------------------P~~~~d~~~~a~l~~~~-~~pi 264 (404)
T 3ekg_A 243 -------E--------------------------------------------------ALPPDDYWGYAELRRNA-PTGM 264 (404)
T ss_dssp -------C--------------------------------------------------CSCTTCHHHHHHHHHHS-CTTC
T ss_pred -------c--------------------------------------------------CCCcccHHHHHHHHHhc-CCCe
Confidence 1 12233566667766654 5663
Q ss_pred -EEec-CCCCHHHHHHHHHcCCCccEEEE
Q psy9514 553 -YGNG-DILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 553 -IgnG-gI~s~eda~~~l~~G~~aD~VmI 579 (611)
|+.| .++|..++.++++.+ .+|.|++
T Consensus 265 ~Ia~gE~~~~~~~~~~li~~~-a~dii~~ 292 (404)
T 3ekg_A 265 MVTTGEHEATRWGFRMLLEMG-CCDIIQP 292 (404)
T ss_dssp EEEECTTCCHHHHHHHHHHTT-CCSEECC
T ss_pred EEEecCccCCHHHHHHHHHcC-CCCeEec
Confidence 4445 588899999999887 7888876
No 429
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=79.68 E-value=4 Score=41.36 Aligned_cols=87 Identities=15% Similarity=0.118 Sum_probs=53.2
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 51 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEATT------------------------------------------------M 51 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3355678888888999999998888765321 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 52 s~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~G--adavlv~~P~y~~~s 111 (291)
T 3a5f_A 52 TETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIG--VDGLLVITPYYNKTT 111 (291)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcC--CCEEEEcCCCCCCCC
Confidence 1111122333333322 368987 56665544443322 2345 999999988888774
No 430
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=79.54 E-value=56 Score=33.07 Aligned_cols=83 Identities=11% Similarity=0.011 Sum_probs=52.6
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+. |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 34 D~~~l~~lv~~li~-~Gv~gi~v~Gtt----------GE~~~Lt~~Er~~v~~~~~~~~~grvpviaG--vg~-~~t~~a 99 (304)
T 3l21_A 34 DTATAARLANHLVD-QGCDGLVVSGTT----------GESPTTTDGEKIELLRAVLEAVGDRARVIAG--AGT-YDTAHS 99 (304)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE--CCC-SCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEeCccc----------cchhhCCHHHHHHHHHHHHHHhCCCCeEEEe--CCC-CCHHHH
Confidence 45666666666643 489998776432 2222222333345666666555 3577665 332 345789
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 100 i~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 9999999999999998864
No 431
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=79.41 E-value=7.5 Score=39.95 Aligned_cols=52 Identities=10% Similarity=0.181 Sum_probs=39.0
Q ss_pred ChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccc
Q psy9514 422 RANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRT 477 (611)
Q Consensus 422 r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~ 477 (611)
.++.+.+.++.+++..+.|+.|-+-.. . +...+.++.+.++|+++|.+|+..
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~---~~~~~~~~~a~~~g~d~V~~~~g~ 98 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S---PFVEDIVDLVIEEGVKVVTTGAGN 98 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S---TTHHHHHHHHHHTTCSEEEECSSC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C---CCHHHHHHHHHHCCCCEEEECCCC
Confidence 567778888888887788988776532 1 234567788889999999998854
No 432
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=79.17 E-value=4.8 Score=40.85 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=53.5
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~------------------------------------------------L 52 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPT------------------------------------------------L 52 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccccccc------------------------------------------------C
Confidence 3456778888999999999999888765331 1
Q ss_pred cCCccHHHHHHHHhh-CCCCcEEE-ecCCCCHHHHHHH----HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQL-CSPAPLYG-NGDILSYEDYTES----LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~-~~~iPVIg-nGgI~s~eda~~~----l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++. ..++|||+ .|.. |.+++.++ .+.| +|+||+--..+.+|.
T Consensus 53 t~~Er~~v~~~~~~~~~grvpviaGvg~~-~t~~ai~la~~a~~~G--adavlv~~P~y~~~~ 112 (292)
T 3daq_A 53 TTDEKELILKTVIDLVDKRVPVIAGTGTN-DTEKSIQASIQAKALG--ADAIMLITPYYNKTN 112 (292)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCS-CHHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCcc-cHHHHHHHHHHHHHcC--CCEEEECCCCCCCCC
Confidence 111111233333332 24689885 5554 45555443 2345 999999988888874
No 433
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=79.14 E-value=4.3 Score=41.36 Aligned_cols=87 Identities=17% Similarity=0.193 Sum_probs=54.3
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~------------------------------------------------L 62 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGESPT------------------------------------------------L 62 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3355778899999999999999888865331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 63 s~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~s 122 (301)
T 1xky_A 63 TSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG--VDAVMLVAPYYNKPS 122 (301)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcC--CCEEEEcCCCCCCCC
Confidence 1111122333333322 468987 56666555444322 2345 999999999888873
No 434
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=79.09 E-value=9.7 Score=38.10 Aligned_cols=53 Identities=13% Similarity=0.065 Sum_probs=36.4
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEE-EE
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLIT-LH 474 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~It-vh 474 (611)
.|+..+++..++.++.+ .+.||.+|.- ...+..+....+..+...|..-|+ +|
T Consensus 112 Iga~~~~n~~ll~~~a~-----~~kPV~lk~G--~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 112 IGARNSQNFELLKEVGK-----VENPVLLKRG--MGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp ECGGGTTCHHHHHHHTT-----SSSCEEEECC--TTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ECcccccCHHHHHHHHh-----cCCcEEEecC--CCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 46777788777755444 6899998844 434556777788888888874444 45
No 435
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=78.94 E-value=11 Score=38.23 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=35.7
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEcc
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGR 476 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR 476 (611)
.|+..+.+..++ +++ ..++.||.+|.-+. .+..+....+..+...|..-+++.-|
T Consensus 111 Iga~~~~n~~ll----~~~-a~~~kPV~lk~G~~--~t~~e~~~A~~~i~~~Gn~~i~L~~r 165 (280)
T 2qkf_A 111 LPAFLARQTDLV----VAM-AKTGNVVNIKKPQF--LSPSQMKNIVEKFHEAGNGKLILCER 165 (280)
T ss_dssp ECGGGTTBHHHH----HHH-HHTCCEEEEECCTT--SCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred ECcccccCHHHH----HHH-HcCCCcEEEECCCC--CCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 467777777755 444 24689999985543 34456677778888889754444333
No 436
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.94 E-value=4.7 Score=41.33 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=33.3
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHH---hhcCCCEEEEE
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMN---EVSSLPITVKT 445 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~---~~~~~PvtVKi 445 (611)
+++.+.+.|+.+. ..|+|.||||+|-+ .....+.+.+++..+. +.+++||+|-.
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~g~~------------~v~~~eem~rvv~~i~~~~~~~~vpisIDT 91 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNMDDG------------LLDARTEMTTFLNLIMSEPEIARVPVMIDS 91 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEECCCT------------TSCHHHHHHHHHHHHHTCHHHHTSCEEEEC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCCC------------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeC
Confidence 4556666666554 35999999998543 1222334444444443 55788998864
No 437
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=78.92 E-value=54 Score=33.17 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=52.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+ -|-...-..+.-.++++.+.+.+ .+||.+-+ |. .+..++
T Consensus 31 D~~~l~~lv~~li~-~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--g~-~st~~a 96 (306)
T 1o5k_A 31 DLESYERLVRYQLE-NGVNALIVLGT----------TGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA--GT-NSTEKT 96 (306)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEEESSG----------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC--CC-SCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC--CC-ccHHHH
Confidence 55667777776643 48999877632 12222223333345566655554 36877653 32 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 438
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=78.72 E-value=57 Score=32.68 Aligned_cols=83 Identities=14% Similarity=0.002 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+- +|. .+..++
T Consensus 19 D~~~l~~lv~~li~-~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG--vg~-~~t~~a 84 (289)
T 2yxg_A 19 DFDGLEENINFLIE-NGVSGIVAVGTT----------GESPTLSHEEHKKVIEKVVDVVNGRVQVIAG--AGS-NCTEEA 84 (289)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE--CCC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-CCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--CCC-CCHHHH
Confidence 55667777776643 589998776432 22222233333556666655543 666654 333 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 85 i~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 439
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=78.70 E-value=4.5 Score=41.16 Aligned_cols=87 Identities=16% Similarity=0.109 Sum_probs=53.3
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+... .
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 57 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGESAT------------------------------------------------L 57 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccc------------------------------------------------C
Confidence 3356778888899999999999888865331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHH---HHHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTE---SLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~---~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.....+.++.+++.. .++||| |.|...+.+-++. +.+.| +|+||+--..+.+|.
T Consensus 58 s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G--adavlv~~P~y~~~~ 117 (297)
T 3flu_A 58 SVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG--ADYTLSVVPYYNKPS 117 (297)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 468988 5555544443332 22344 999999988888874
No 440
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=78.69 E-value=3.6 Score=41.91 Aligned_cols=87 Identities=17% Similarity=0.214 Sum_probs=54.0
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~------------------------------------------------L 57 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESAT------------------------------------------------L 57 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 4456778899999999999999888765331 1
Q ss_pred cCCccHHHHHHHHhhC-C-CCcEE-EecCCCCHHHHHHHH---HcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-S-PAPLY-GNGDILSYEDYTESL---KKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~-~iPVI-gnGgI~s~eda~~~l---~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.....+.++.+++.. . ++||| |.|... .+++.++. +.- ++|+||+--..+.+|.
T Consensus 58 s~~Er~~v~~~~~~~~~g~rvpviaGvg~~~-t~~ai~la~~a~~~-Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 58 THEEHRTCIEIAVETCKGTKVKVLAGAGSNA-THEAVGLAKFAKEH-GADGILSVAPYYNKPT 118 (301)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEEECCCSS-HHHHHHHHHHHHHT-TCSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEEeCCCCC-HHHHHHHHHHHHHc-CCCEEEEcCCCCCCCC
Confidence 1111123333333332 3 58988 455554 44444332 223 4999999998888884
No 441
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=78.60 E-value=4 Score=41.91 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=53.5
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+... .
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~------------------------------------------------L 73 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESAT------------------------------------------------L 73 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGG------------------------------------------------C
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3456778899999999999999888865331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH----HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES----LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~----l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|... .+++.++ .+.| +|+||+--..+.+|.
T Consensus 74 s~~Er~~v~~~~v~~~~grvpViaGvg~~s-t~eai~la~~A~~~G--adavlv~~P~y~~~s 133 (314)
T 3qze_A 74 DVEEHIQVIRRVVDQVKGRIPVIAGTGANS-TREAVALTEAAKSGG--ADACLLVTPYYNKPT 133 (314)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSS-HHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCcC-HHHHHHHHHHHHHcC--CCEEEEcCCCCCCCC
Confidence 1111112233333322 468988 455554 4444433 2345 999999988888884
No 442
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=78.48 E-value=4.9 Score=40.77 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 53 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGCS------------------------------------------------V 53 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3355778888899999999999888765331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhC-C
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIK-P 587 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~d-P 587 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+--..+.+ |
T Consensus 54 s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~~ 113 (294)
T 3b4u_A 54 GSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG--ARNILLAPPSYFKNV 113 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT--CSEEEECCCCSSCSC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC--CCEEEEcCCcCCCCC
Confidence 1111123334444433 358987 67766554444322 2345 9999999888887 6
No 443
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=78.46 E-value=4.2 Score=41.21 Aligned_cols=87 Identities=18% Similarity=0.206 Sum_probs=53.4
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+...++++.+.+.|++.|.+-|.+.+..+ .+
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------Ls 52 (292)
T 2ojp_A 21 RASLKKLIDYHVASGTSAIVSVGTTGESAT------------------------------------------------LN 52 (292)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTTTGGG------------------------------------------------SC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccchhh------------------------------------------------CC
Confidence 355678888888999999998888765331 11
Q ss_pred CCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHHHH--cCCCccEEEEcHHhhhCCc
Q psy9514 533 KQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTESLK--KSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~l~--~G~~aD~VmIGRgaL~dP~ 588 (611)
.......++.+++.. .++||| |.|...+.+-++.... .- ++|+||+-...+.+|.
T Consensus 53 ~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~-Gadavlv~~P~y~~~s 111 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDS-GIVGCLTVTPYYNRPS 111 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTS-SCSEEEEECCCSSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhc-CCCEEEECCCCCCCCC
Confidence 111122333333322 368987 5666655444433322 22 4999999999888873
No 444
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=78.44 E-value=4.4 Score=40.99 Aligned_cols=87 Identities=20% Similarity=0.127 Sum_probs=54.5
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 50 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGESPT------------------------------------------------L 50 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhh------------------------------------------------C
Confidence 4456778899999999999999888765331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+--..+.+|.
T Consensus 51 s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G--adavlv~~P~y~~~s 110 (289)
T 2yxg_A 51 SHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVG--ADAVLSITPYYNKPT 110 (289)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 368987 66766554444322 3355 999999988888873
No 445
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=78.43 E-value=54 Score=33.39 Aligned_cols=83 Identities=12% Similarity=0.011 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++|=++.+- |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 43 D~~~l~~lv~~li-~~Gv~Gi~v~GtT----------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaG--vg~-~~t~~a 108 (315)
T 3na8_A 43 DLPALGRSIERLI-DGGVHAIAPLGST----------GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVS--VSD-LTTAKT 108 (315)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEECSSGG----------GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE--CCC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--cCC-CCHHHH
Confidence 5566667776664 3589998776322 2222223333345666665554 3788775 332 345789
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 109 i~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988754
No 446
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=78.34 E-value=4.4 Score=41.38 Aligned_cols=87 Identities=17% Similarity=0.148 Sum_probs=54.2
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+.|.+.+..+ .
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~------------------------------------------------L 66 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPT------------------------------------------------T 66 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTT------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3455778899999999999999888865321 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 67 s~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~G--adavlv~~P~y~~~~ 126 (304)
T 3cpr_A 67 TAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAG--ADGLLVVTPYYSKPS 126 (304)
T ss_dssp CHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 368987 56666554444322 2345 999999999888874
No 447
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=78.31 E-value=59 Score=32.64 Aligned_cols=83 Identities=12% Similarity=0.009 Sum_probs=51.7
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+- +|. .+..++
T Consensus 19 D~~~l~~lv~~li-~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~-~~t~~a 84 (294)
T 2ehh_A 19 DYEALGNLIEFHV-DNGTDAILVCGTT----------GESPTLTFEEHEKVIEFAVKRAAGRIKVIAG--TGG-NATHEA 84 (294)
T ss_dssp CHHHHHHHHHHHH-TTTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE--CCC-SCHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--cCC-CCHHHH
Confidence 5566667777664 3588988776432 22222233333456666655543 666654 332 245778
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 448
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=78.18 E-value=13 Score=37.39 Aligned_cols=137 Identities=15% Similarity=0.068 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchh
Q psy9514 425 ILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNI 504 (611)
Q Consensus 425 ~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~ 504 (611)
.+.+.++..++.-...+..-+-.| +++.+.+.++++.|.++|+|+|.+--=... -.+|...|.....
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aG-dP~~~~~~~~~~~l~~~GaD~iElGiPfSD----P~aDGpvIq~a~~-------- 72 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIG-DPNPEQSLAIMQTLIDAGADALELGMPFSD----PLADGPTIQGANL-------- 72 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETT-SSCHHHHHHHHHHHHHTTCSSEEEECCCCC----GGGCCSHHHHHHH--------
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEECCCCCC----CCCCCHHHHHHHH--------
Confidence 355666666654334555555555 466788999999999999999988542211 1133333332110
Q ss_pred hhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCC-----CHH-HHHHHHHcCCCccEEE
Q psy9514 505 IHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDIL-----SYE-DYTESLKKSPSISGVM 578 (611)
Q Consensus 505 ~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~-----s~e-da~~~l~~G~~aD~Vm 578 (611)
..-+.|. +-..-++.++++.+...++||+.-|-.+ ..+ .+.++.+.| +|+|.
T Consensus 73 ------rAL~~G~--------------~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aG--vdGvI 130 (271)
T 3nav_A 73 ------RALAAKT--------------TPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAG--VDSVL 130 (271)
T ss_dssp ------HHHHTTC--------------CHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHT--CCEEE
T ss_pred ------HHHHcCC--------------CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCC--CCEEE
Confidence 1111111 1112356777776654689999876432 223 345556676 99999
Q ss_pred EcHHhhhCCchHHHHHcc
Q psy9514 579 IGRGALIKPWIFQEIKEK 596 (611)
Q Consensus 579 IGRgaL~dP~lf~ei~~g 596 (611)
|.---+....-+.+..+.
T Consensus 131 ipDlp~ee~~~~~~~~~~ 148 (271)
T 3nav_A 131 IADVPTNESQPFVAAAEK 148 (271)
T ss_dssp ETTSCGGGCHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHH
Confidence 965555544444444333
No 449
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=78.07 E-value=62 Score=32.76 Aligned_cols=142 Identities=11% Similarity=0.109 Sum_probs=84.1
Q ss_pred ecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEE-EccccCC
Q psy9514 374 QLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKT-RTGIHKD 452 (611)
Q Consensus 374 Qi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKi-R~g~~~~ 452 (611)
...|.+.+.+.+|.+. ||.-|-+..++ -.+.++.+...++++.... .|+.|-.-+ ++|..++
T Consensus 87 lDHg~~~e~i~~ai~~-----GFtSVMiDgS~-----------~p~eeNi~~Tk~vv~~ah~-~gvsVEaElG~vgG~Ed 149 (288)
T 3q94_A 87 LDHGSSFEKCKEAIDA-----GFTSVMIDASH-----------HPFEENVETTKKVVEYAHA-RNVSVEAELGTVGGQED 149 (288)
T ss_dssp EEEECSHHHHHHHHHH-----TCSEEEECCTT-----------SCHHHHHHHHHHHHHHHHT-TTCEEEEEESBCBCSCS
T ss_pred CCCCCCHHHHHHHHHc-----CCCeEEEeCCC-----------CCHHHHHHHHHHHHHHHHH-cCCeEEEEeeeeccccC
Confidence 3455566666666433 78777776655 1345667777777776654 355544444 2332221
Q ss_pred c--------hHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecc
Q psy9514 453 N--------NIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHG 524 (611)
Q Consensus 453 ~--------~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihg 524 (611)
. ++..+..+-+++.|+|.|.+.-++ .||
T Consensus 150 ~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt--------------------------------------------~HG 185 (288)
T 3q94_A 150 DVIAEGVIYADPAECKHLVEATGIDCLAPALGS--------------------------------------------VHG 185 (288)
T ss_dssp SCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSC--------------------------------------------BSS
T ss_pred CcCCccccCCCHHHHHHHHHHHCCCEEEEEcCc--------------------------------------------ccC
Confidence 0 112233333456778877776554 233
Q ss_pred cccccccc--CCccHHHHHHHHhhCCCCcEEEecCCC-CHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 525 RTREQRYT--KQADWDYIEKCAQLCSPAPLYGNGDIL-SYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 525 rtr~g~~~--~~a~~~~i~~~~k~~~~iPVIgnGgI~-s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
. |. +.-+++.+.++.+.. ++|++.=|+=- +.+++.+++..| +-=|=|++.+.
T Consensus 186 ~-----Y~~~p~Ld~~~L~~I~~~v-~vpLVlHGgSG~~~e~i~~ai~~G--v~KiNi~Tdl~ 240 (288)
T 3q94_A 186 P-----YKGEPNLGFAEMEQVRDFT-GVPLVLHGGTGIPTADIEKAISLG--TSKINVNTENQ 240 (288)
T ss_dssp C-----CSSSCCCCHHHHHHHHHHH-CSCEEECCCTTCCHHHHHHHHHTT--EEEEEECHHHH
T ss_pred C-----cCCCCccCHHHHHHHHHhc-CCCEEEeCCCCCCHHHHHHHHHcC--CeEEEEChHHH
Confidence 2 32 334778888876654 79988776544 456677888887 88888887653
No 450
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=78.04 E-value=62 Score=32.73 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=35.5
Q ss_pred CccHHHHHHHHhhCCCCcEEEecCCC-CHHHHHHHHHcCCCccEEEEcHHhh
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGDIL-SYEDYTESLKKSPSISGVMIGRGAL 584 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGgI~-s~eda~~~l~~G~~aD~VmIGRgaL 584 (611)
.-+++.+.++.+. .++|++.=|+=- +.+++.+++..| +-=|=|++.+.
T Consensus 188 ~Ld~~~L~~I~~~-~~vpLVlHGgSG~~~e~i~~ai~~G--v~KiNi~Tdl~ 236 (286)
T 1gvf_A 188 KIDFQRLAEIREV-VDVPLVLHGASDVPDEFVRRTIELG--VTKVNVATELK 236 (286)
T ss_dssp CCCHHHHHHHHHH-CCSCEEECCCTTCCHHHHHHHHHTT--EEEEEECHHHH
T ss_pred ccCHHHHHHHHHh-cCCCEEEECCCCCCHHHHHHHHHCC--CeEEEEChHHH
Confidence 3478888887665 589999877544 556678889887 88888887653
No 451
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=78.01 E-value=4.7 Score=40.89 Aligned_cols=86 Identities=9% Similarity=-0.019 Sum_probs=53.8
Q ss_pred chHHHHHHHHHHH-cCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 453 NNIIHNFMPKFRD-WGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 453 ~~~a~~la~~l~~-aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
.+...++++.+.+ .|++.|.+.|.+.+..+ .
T Consensus 23 ~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~------------------------------------------------L 54 (293)
T 1f6k_A 23 EKGLRQIIRHNIDKMKVDGLYVGGSTGENFM------------------------------------------------L 54 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEESSGGGTGGG------------------------------------------------S
T ss_pred HHHHHHHHHHHHhhCCCcEEEeCccccchhh------------------------------------------------C
Confidence 3556788888889 99999999888765331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 55 s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G--adavlv~~P~y~~~~ 114 (293)
T 1f6k_A 55 STEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELG--YDCLSAVTPFYYKFS 114 (293)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 368988 56666554444322 2345 999999999888884
No 452
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=78.00 E-value=16 Score=39.45 Aligned_cols=125 Identities=6% Similarity=-0.001 Sum_probs=74.2
Q ss_pred CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEccccCCchHH
Q psy9514 378 NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 378 ~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g~~~~~~~a 456 (611)
.+++.+++.|+.+.+..||..|-|..|.+ ++..-.+.|++|+++. ++++.|-.--++ +..++
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w--~~~~A 246 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCW--SLDEA 246 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBS--CHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCC--CHHHH
Confidence 57888888777664445999988876542 1222345678888876 233333322222 34567
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCcc
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQAD 536 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~ 536 (611)
..+++.|++. +.+|- |- ..+.+
T Consensus 247 ~~~~~~L~~~-l~~iE-------eP--------------------------------------------------~~~~d 268 (455)
T 3pfr_A 247 IQLCKGLNDV-LTYAE-------DP--------------------------------------------------CIGEN 268 (455)
T ss_dssp HHHHTTCTTT-CSEEE-------SC--------------------------------------------------BCCBT
T ss_pred HHHHHhhccc-ceeee-------cC--------------------------------------------------CChhh
Confidence 7777777654 44321 11 11112
Q ss_pred ----HHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 537 ----WDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 537 ----~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
++.++++.+. .++||.+.=-+.++.++.++++.+ .+|.+++
T Consensus 269 ~~~~~~~~~~l~~~-~~iPIa~dE~~~~~~~~~~~i~~~-a~di~~~ 313 (455)
T 3pfr_A 269 GYSGREIMAEFRRR-TGIPTATNMIATNWREMCHAIMLQ-SVDIPLA 313 (455)
T ss_dssp TBCHHHHHHHHHHH-HCCCEEESSSCCSHHHHHHHHHHT-CCSEEBC
T ss_pred ccchHHHHHHHHhc-CCCCEEeCCCcCCHHHHHHHHHcC-CCCEEEe
Confidence 3555555554 368877755667788888888876 6887754
No 453
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=77.97 E-value=4.4 Score=41.13 Aligned_cols=87 Identities=20% Similarity=0.164 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 50 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGESPT------------------------------------------------L 50 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhh------------------------------------------------C
Confidence 4456778888899999999999888765321 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+--..+.+|.
T Consensus 51 s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~s 110 (294)
T 2ehh_A 51 TFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVG--ADGALVVVPYYNKPT 110 (294)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 368987 56666554444322 2345 999999988888873
No 454
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=77.91 E-value=3.9 Score=41.61 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~------------------------------------------------L 50 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGESPT------------------------------------------------L 50 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhh------------------------------------------------C
Confidence 3455778888899999999988888765321 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHH---HHHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTE---SLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~---~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++. +.+.| +|+||+-...+.+|.
T Consensus 51 s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~s 110 (297)
T 2rfg_A 51 TEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAG--ADAVLCVAGYYNRPS 110 (297)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHT--CSEEEECCCTTTCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcC--CCEEEEcCCCCCCCC
Confidence 1111122333333322 368887 6666655444432 23355 999999999888883
No 455
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=77.88 E-value=54 Score=33.86 Aligned_cols=83 Identities=13% Similarity=-0.020 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 50 D~~~l~~lv~~li~-~Gv~Gl~v~GtT----------GE~~~Ls~eEr~~vi~~~ve~~~grvpViaG--vg~-~st~ea 115 (343)
T 2v9d_A 50 DKPGTAALIDDLIK-AGVDGLFFLGSG----------GEFSQLGAEERKAIARFAIDHVDRRVPVLIG--TGG-TNARET 115 (343)
T ss_dssp CHHHHHHHHHHHHH-TTCSCEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCS-SCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEeCccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--cCC-CCHHHH
Confidence 55667777776643 488888776432 2222223333355666666555 3677765 332 345678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 116 i~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 456
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=77.86 E-value=8.5 Score=39.37 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=28.1
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHH
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRG 582 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRg 582 (611)
..+++.++||| +++.+.++.+.| +|.+.+|.-
T Consensus 252 ~~v~ieaSGGI-~~~~i~~~a~tG--VD~isvG~l 283 (298)
T 3gnn_A 252 GRAVLEVSGGV-NFDTVRAIAETG--VDRISIGAL 283 (298)
T ss_dssp TSEEEEEESSC-STTTHHHHHHTT--CSEEECGGG
T ss_pred CCCeEEEEcCC-CHHHHHHHHHcC--CCEEEECCe
Confidence 46899999999 688999999887 999999964
No 457
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=77.67 E-value=4.8 Score=41.11 Aligned_cols=86 Identities=12% Similarity=-0.023 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+...++++.+.+.|++.|.+-|.+.+..+ .+
T Consensus 31 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~------------------------------------------------Ls 62 (303)
T 2wkj_A 31 KASLRRLVQFNIQQGIDGLYVGGSTGEAFV------------------------------------------------QS 62 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGG------------------------------------------------SC
T ss_pred HHHHHHHHHHHHHcCCCEEEECeeccChhh------------------------------------------------CC
Confidence 355678899999999999999888865331 11
Q ss_pred CCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 533 KQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 63 ~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~s 121 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYG--FDAVSAVTPFYYPFS 121 (303)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCC--CCEEEecCCCCCCCC
Confidence 111122333333322 468988 67766555444322 3355 999999998888873
No 458
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=77.64 E-value=4.5 Score=41.74 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=65.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceecccccc---ccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGS---GLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNI 455 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~Gs---aLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~ 455 (611)
+++.+.+.|+.+. ..|+|.|||++-.. .-|+ +..+..+.+..+|+++++..++||+|-.. +
T Consensus 31 ~~~~a~~~a~~~v-~~GAdIIDIGgeST-------rPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~-----~--- 94 (314)
T 2vef_A 31 ALEQALQQARKLI-AEGASMLDIGGEST-------RPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTW-----K--- 94 (314)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECS-----C---
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCcC-------CCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCC-----C---
Confidence 4555555555543 35999999996331 0122 22356677888888888877889888522 1
Q ss_pred HHHHHHHHHHcCCCEEE-EEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccc
Q psy9514 456 IHNFMPKFRDWGASLIT-LHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGR 525 (611)
Q Consensus 456 a~~la~~l~~aGvd~It-vhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgr 525 (611)
.+.+++..++|++.|. |+|.... ..+.+.+.+.|+..+.+|-+
T Consensus 95 -~~Va~aAl~aGa~iINDVsg~~~d--------------------------~~m~~v~a~~~~~vvlmh~~ 138 (314)
T 2vef_A 95 -SQVAEAALAAGADLVNDITGLMGD--------------------------EKMPHVVAEARAQVVIMFNP 138 (314)
T ss_dssp -HHHHHHHHHTTCCEEEETTTTCSC--------------------------TTHHHHHHHHTCEEEEECCH
T ss_pred -HHHHHHHHHcCCCEEEECCCCCCC--------------------------hHHHHHHHHcCCCEEEEecC
Confidence 2567777778999885 4443211 13455667889998888754
No 459
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=77.61 E-value=65 Score=32.81 Aligned_cols=83 Identities=10% Similarity=0.041 Sum_probs=52.7
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++|=++.+- |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 41 D~~~l~~li~~li-~~Gv~Gl~v~GtT----------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaG--vg~-~st~~a 106 (315)
T 3si9_A 41 DEKAFCNFVEWQI-TQGINGVSPVGTT----------GESPTLTHEEHKRIIELCVEQVAKRVPVVAG--AGS-NSTSEA 106 (315)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEECSSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE--CCC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCccc----------cCccccCHHHHHHHHHHHHHHhCCCCcEEEe--CCC-CCHHHH
Confidence 5566777777664 3589998765432 2222222333345566555554 3688775 332 345788
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 107 i~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999998764
No 460
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=77.60 E-value=4.1 Score=42.19 Aligned_cols=87 Identities=14% Similarity=0.155 Sum_probs=55.1
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~------------------------------------------------L 84 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYMY------------------------------------------------L 84 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3355778899999999999999998865331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHH---HHHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTE---SLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~---~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++. +.+.| +|+||+-...+.+|.
T Consensus 85 s~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G--adavlv~~P~Y~~~s 144 (332)
T 2r8w_A 85 TREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG--ADALLLAPVSYTPLT 144 (332)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT--CSEEEECCCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333332 368988 6777655544432 23355 999999998888873
No 461
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=77.32 E-value=65 Score=32.57 Aligned_cols=83 Identities=10% Similarity=0.025 Sum_probs=51.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+- +|. .+..++
T Consensus 35 D~~~l~~lv~~li~-~Gv~gl~v~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~-~st~~a 100 (304)
T 3cpr_A 35 DIAAGREVAAYLVD-KGLDSLVLAGTT----------GESPTTTAAEKLELLKAVREEVGDRAKLIAG--VGT-NNTRTS 100 (304)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEEESSTT----------TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE--CCC-SCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEec--CCC-CCHHHH
Confidence 55666677776643 488887765432 22222233333556666665553 566654 332 245778
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 101 i~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 462
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=77.25 E-value=23 Score=35.91 Aligned_cols=56 Identities=13% Similarity=0.203 Sum_probs=36.6
Q ss_pred cccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCchHHHHHHHHHHHcCCCEEEE-Eccc
Q psy9514 415 SGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDNNIIHNFMPKFRDWGASLITL-HGRT 477 (611)
Q Consensus 415 ~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~~~a~~la~~l~~aGvd~Itv-hgR~ 477 (611)
.|+..+.+..++.+ +. .++.||.+|.-++ -...+....++.+.+.|..-|.+ |..+
T Consensus 116 IgA~~~~n~~LLr~----va-~~gkPVilK~G~~--~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 116 VPAFLARQTDLVVA----IA-KAGKPVNVKKPQF--MSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp ECGGGTTCHHHHHH----HH-HTSSCEEEECCTT--SCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred ECccccCCHHHHHH----HH-ccCCcEEEeCCCC--CCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 47777888886544 33 3689999985543 23345567778888888765554 5444
No 463
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=77.20 E-value=94 Score=34.39 Aligned_cols=222 Identities=14% Similarity=0.085 Sum_probs=0.0
Q ss_pred eccCCCC----CCHHHHHHHHHc----------CCCEEEecCcccchhhcCChhhhHhHhhccCCCeEEEEe--------
Q psy9514 263 LSPLTTV----GNLPFRRLCKKW----------GADITCSEMAVATELLKSSPQEWALIKRHESEDLFGVQL-------- 320 (611)
Q Consensus 263 lAPMt~~----gnlpfRrl~~~~----------Ga~li~tEm~~~~~l~~g~~~e~~l~~~h~~e~~~~vQi-------- 320 (611)
+.|.... +++.|..+...| |+|++.-|.+.. +...+.-...++....+.|+.+++
T Consensus 106 iGP~g~~~~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~---~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~ 182 (566)
T 1q7z_A 106 IGPTGELPYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSD---ILELKAAVLAAREVSRDVFLIAHMTFDEKGRS 182 (566)
T ss_dssp ECCCSCCBTTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECC---HHHHHHHHHHHHHHCSSSCEEEEECCCTTSCC
T ss_pred CCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeccCC---HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCee
Q ss_pred ------------------------cCCChhhHHHHHHHHhhhc-cceeeeccCCCCc--chhhccCCCccccccccceee
Q psy9514 321 ------------------------CGNNPYVLTKCTQLLEEQM-AVDFVDVNLGCPI--EFIYKQGSGSGLLQRANLFGV 373 (611)
Q Consensus 321 ------------------------~g~~p~~~~~~a~~l~~~~-~v~~idln~gcp~--~~~~~~~~~~~l~~~~~~~iv 373 (611)
|+.+|+.+..+.+.+.... ..-.+..|.|.|. +. .
T Consensus 183 ~~G~~~~~~~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~------------------~ 244 (566)
T 1q7z_A 183 LTGTDPANFAITFDELDIDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENG------------------K 244 (566)
T ss_dssp TTSCCHHHHHHHHHTSSCSEEEEESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETT------------------E
T ss_pred CCCCcHHHHHHHhhccCCCEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCC------------------c
Q ss_pred ecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhh-----------------
Q psy9514 374 QLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEV----------------- 436 (611)
Q Consensus 374 Qi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~----------------- 436 (611)
-.+-.+|+.|.+.+....+ .--.-.||.-.-.|+.+..|.+.+...
T Consensus 245 ~~~~~~p~~~a~~~~~~~~-----------------~G~~iiGGCCGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~ 307 (566)
T 1q7z_A 245 TVYPLKPHDFAVHIDSYYE-----------------LGVNIFGGCCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPS 307 (566)
T ss_dssp EECCCCHHHHHTTHHHHHH-----------------TTCSEECCCTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSS
T ss_pred cccCCCHHHHHHHHHHHHH-----------------cCCcEEccccCCCHHHHHHHHHHhcCCCCCCcccCccceecCCc
Q ss_pred ----cCCCEEEEEEccccC-----------CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccC
Q psy9514 437 ----SSLPITVKTRTGIHK-----------DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRD 501 (611)
Q Consensus 437 ----~~~PvtVKiR~g~~~-----------~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~ 501 (611)
+..|+.+..|+.... +.+.+.+.++.+.+.|++.|.|--....
T Consensus 308 ~~~~~~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIgpg~~~---------------------- 365 (566)
T 1q7z_A 308 KLVTFDHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNFGIES---------------------- 365 (566)
T ss_dssp CEEESSSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECSSGG----------------------
T ss_pred eeeccccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHHCCCCEEEECCCCCC----------------------
Q ss_pred chhhhhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHc--CCCccEE
Q psy9514 502 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKK--SPSISGV 577 (611)
Q Consensus 502 ~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~--G~~aD~V 577 (611)
......+..+-.+++...++||.. |-++++-+++.++. | ++.|
T Consensus 366 -----------------------------v~~~ee~~rvv~~i~~~~~vpisI--DT~~~~v~eaal~~~~G--~~iI 410 (566)
T 1q7z_A 366 -----------------------------QIDVRYVEKIVQTLPYVSNVPLSL--DIQNVDLTERALRAYPG--RSLF 410 (566)
T ss_dssp -----------------------------GSCHHHHHHHHHHHHHHTCSCEEE--ECCCHHHHHHHHHHCSS--CCEE
T ss_pred -----------------------------CCHHHHHHHHHHHHHhhCCceEEE--eCCCHHHHHHHHHhcCC--CCEE
No 464
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=77.02 E-value=5.2 Score=40.88 Aligned_cols=87 Identities=15% Similarity=0.168 Sum_probs=54.9
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~------------------------------------------------L 62 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGESPT------------------------------------------------V 62 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGG------------------------------------------------C
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhh------------------------------------------------C
Confidence 4456778999999999999999998865331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 63 s~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~G--adavlv~~P~y~~~s 122 (306)
T 1o5k_A 63 NEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLG--ANGVLVVTPYYNKPT 122 (306)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 368987 56666555444322 3355 999999998888873
No 465
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=76.98 E-value=4.8 Score=40.76 Aligned_cols=86 Identities=15% Similarity=0.158 Sum_probs=52.9
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+... .
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 51 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEAST------------------------------------------------L 51 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccccccc------------------------------------------------C
Confidence 3355778888888999999988888765320 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH----HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES----LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~----l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|... .+++.++ .+.| +|+||+--..+.+|.
T Consensus 52 s~~Er~~v~~~~~~~~~gr~pviaGvg~~~-t~~ai~la~~a~~~G--adavlv~~P~y~~~~ 111 (291)
T 3tak_A 52 SMEEHTQVIKEIIRVANKRIPIIAGTGANS-TREAIELTKAAKDLG--ADAALLVTPYYNKPT 111 (291)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCCSS-HHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCC-HHHHHHHHHHHHhcC--CCEEEEcCCCCCCCC
Confidence 1111122333333322 468988 455554 4444433 3355 999999988888874
No 466
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=76.93 E-value=5.2 Score=40.85 Aligned_cols=86 Identities=15% Similarity=0.152 Sum_probs=53.9
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~------------------------------------------------L 65 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESPT------------------------------------------------T 65 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhh------------------------------------------------C
Confidence 3456778899999999999999888865331 1
Q ss_pred cCCccHHHHHHHHhh-CCCCcEE-EecCCCCHHHHHHH----HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQL-CSPAPLY-GNGDILSYEDYTES----LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~-~~~iPVI-gnGgI~s~eda~~~----l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++. ..++||| |.|... .+++.++ .+.| +|+||+--..+.+|.
T Consensus 66 t~~Er~~v~~~~~~~~~grvpviaGvg~~~-t~~ai~la~~a~~~G--adavlv~~P~y~~~s 125 (304)
T 3l21_A 66 TDGEKIELLRAVLEAVGDRARVIAGAGTYD-TAHSIRLAKACAAEG--AHGLLVVTPYYSKPP 125 (304)
T ss_dssp CHHHHHHHHHHHHHHHTTTSEEEEECCCSC-HHHHHHHHHHHHHHT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCC-HHHHHHHHHHHHHcC--CCEEEECCCCCCCCC
Confidence 111112233333332 2468988 455554 4444433 2345 999999988888873
No 467
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=76.78 E-value=67 Score=32.67 Aligned_cols=83 Identities=14% Similarity=0.042 Sum_probs=52.3
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++|=++.+. |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 42 D~~~l~~lv~~li-~~Gv~Gl~v~GtT----------GE~~~Ls~~Er~~v~~~~v~~~~grvpViaG--vg~-~st~ea 107 (314)
T 3qze_A 42 DWDSLAKLVDFHL-QEGTNAIVAVGTT----------GESATLDVEEHIQVIRRVVDQVKGRIPVIAG--TGA-NSTREA 107 (314)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEESSGG----------GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE--CCC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--CCC-cCHHHH
Confidence 5566667666654 3489998776322 2222223333345556555544 3687774 332 245778
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 108 i~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 9999999999999998764
No 468
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=76.57 E-value=25 Score=37.15 Aligned_cols=118 Identities=10% Similarity=0.111 Sum_probs=65.5
Q ss_pred EEEEccccCCchHHHHHHHHHHHcCCCEEEEEccccccccccC----------------------cChhHHHHHhhhccc
Q psy9514 443 VKTRTGIHKDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQ----------------------ADWDYIEKCAQLCSR 500 (611)
Q Consensus 443 VKiR~g~~~~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~----------------------adw~~i~~~~~~~~~ 500 (611)
.-+-.....+.+.+.++++.+.++|+++|-.-.+.....++.. -.|+...++.+.+++
T Consensus 33 AEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~ 112 (385)
T 1vli_A 33 AEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCRE 112 (385)
T ss_dssp EEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHH
T ss_pred EeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 3344445556678889999999999998765443222111111 123333333333333
Q ss_pred Cchhh------hhcchhhHhcCCceEEeccccccccccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHH
Q psy9514 501 DNNII------HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLK 569 (611)
Q Consensus 501 ~~~~~------~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~ 569 (611)
..... ...++.+.+.|++.+-|.. ...-++.+++.+++ .+.|||..=|+.|.+++..+++
T Consensus 113 ~Gi~~~stpfD~~svd~l~~~~vd~~KIgS-------~~~~N~pLL~~va~--~gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 113 KQVIFLSTVCDEGSADLLQSTSPSAFKIAS-------YEINHLPLLKYVAR--LNRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp TTCEEECBCCSHHHHHHHHTTCCSCEEECG-------GGTTCHHHHHHHHT--TCSCEEEECTTCCHHHHHHHHH
T ss_pred cCCcEEEccCCHHHHHHHHhcCCCEEEECc-------ccccCHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHH
Confidence 22211 1123345555555554422 12237788888876 3789998777789999876654
No 469
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=76.37 E-value=22 Score=38.36 Aligned_cols=128 Identities=8% Similarity=0.033 Sum_probs=76.0
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~ 457 (611)
+++...+.++.+....||+.|-|..|-. ++..-.+.|++++++++ .++.|-.--++ +..++.
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~w--t~~~Ai 264 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAW--SLDEAV 264 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCB--CHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCcc--CHHHHH
Confidence 5566666655555556899888875532 23334567788888774 34333222222 346778
Q ss_pred HHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCccH
Q psy9514 458 NFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADW 537 (611)
Q Consensus 458 ~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a~~ 537 (611)
++++.|++. +.+| +|- ..+. ......
T Consensus 265 ~~~~~le~~-l~wi-------EeP-~~~~---------------------------------------------d~~~~~ 290 (464)
T 4g8t_A 265 KIGKQLKGV-LAYA-------EDP-CGAE---------------------------------------------QGYSGR 290 (464)
T ss_dssp HHHHHTTTT-CSCE-------ESC-BCCB---------------------------------------------TTBCHH
T ss_pred HHHHHhhhc-ccee-------ecC-cCcc---------------------------------------------cccchH
Confidence 888877653 3322 111 0000 001123
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
+.++++.+. .++||.+.=.+.++.++.++++.+ .+|.++.
T Consensus 291 e~~a~lr~~-~~iPIa~gE~~~~~~~~~~~i~~~-avdi~~~ 330 (464)
T 4g8t_A 291 EIMAEFRRA-TGLPTATNMIATDWRQMGHTISLQ-SVDIPLA 330 (464)
T ss_dssp HHHHHHHHH-HCCCEEESSSSCSHHHHHHHHHHT-CCSEEBC
T ss_pred HHHHhhhcc-CCCCccccccccchhhHHHHHHhh-CCCEEec
Confidence 445555544 489999988999999999999987 7886653
No 470
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=76.25 E-value=58 Score=32.83 Aligned_cols=83 Identities=10% Similarity=0.039 Sum_probs=52.5
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+ -|-...-..+.-.++++.+.+.+ .+||.+-+ |. .+..++
T Consensus 19 D~~~l~~lv~~li~-~Gv~gi~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~-~~t~~a 84 (297)
T 2rfg_A 19 DEKALAGLVDWQIK-HGAHGLVPVGT----------TGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA--GS-NNPVEA 84 (297)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEECSSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc--CC-CCHHHH
Confidence 56667777776643 48888776532 12222223333355666655544 37877653 32 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 9999999999999988754
No 471
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=75.88 E-value=13 Score=39.15 Aligned_cols=82 Identities=9% Similarity=0.087 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCC--CEEEEEEccccCCchHHH
Q psy9514 380 PYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSL--PITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 380 p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~--PvtVKiR~g~~~~~~~a~ 457 (611)
++.+.+.|+... ..||..|-|..|-+.... .-...++.-.+.|++|+++++. ++.|-.--++ +.+++.
T Consensus 149 ~e~~~~~a~~~~-~~Gf~~~KlKvg~~~~~~-------~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w--~~~~A~ 218 (392)
T 3v5c_A 149 VALMQEEAMQGY-AKGQRHFKIKVGRGGRHM-------PLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAY--NLNLTK 218 (392)
T ss_dssp HHHHHHHHHHHH-HTTCCCEEEECCTTTTTS-------CHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCC--CHHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECCCCCCccc-------cccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCc--CHHHHH
Confidence 344444444433 359999999876531000 0001245566788899998754 4444322233 346788
Q ss_pred HHHHHHHHcCCCEE
Q psy9514 458 NFMPKFRDWGASLI 471 (611)
Q Consensus 458 ~la~~l~~aGvd~I 471 (611)
.+++.|++.++.+|
T Consensus 219 ~~~~~L~~~~l~~i 232 (392)
T 3v5c_A 219 EVLAALSDVNLYWL 232 (392)
T ss_dssp HHHHHTTTSCCCEE
T ss_pred HHHHhcccCCCeEE
Confidence 99999988877665
No 472
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=75.73 E-value=1.2 Score=45.69 Aligned_cols=63 Identities=22% Similarity=0.162 Sum_probs=33.9
Q ss_pred HhcCCceEEeccccccccccCCccHHHHHHHHhhC-------CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEcHHhhh
Q psy9514 513 RDWGASLITLHGRTREQRYTKQADWDYIEKCAQLC-------SPAPLYGNGDILSYEDYTESLKKSPSISGVMIGRGALI 585 (611)
Q Consensus 513 ~~~G~~~itihgrtr~g~~~~~a~~~~i~~~~k~~-------~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIGRgaL~ 585 (611)
.+.|++.|.++-. +.+.++++++.. ..++|.+.||| +++.+.++.+.| +|++.+|.....
T Consensus 216 ~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~G--vD~i~vGs~i~~ 282 (294)
T 3c2e_A 216 IEAGADVIMLDNF----------KGDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDD--IDIYSTSSIHQG 282 (294)
T ss_dssp HHHTCSEEECCC-------------------------------CCEEEEECCC-CC------CCCS--CSEEECGGGTSS
T ss_pred HHcCCCEEEECCC----------CHHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHHcC--CCEEEEechhcC
Confidence 3578998876431 123333333322 23899999999 899999999987 999999976544
Q ss_pred CCc
Q psy9514 586 KPW 588 (611)
Q Consensus 586 dP~ 588 (611)
-|+
T Consensus 283 a~~ 285 (294)
T 3c2e_A 283 TPV 285 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 344
No 473
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=75.70 E-value=9.8 Score=39.82 Aligned_cols=45 Identities=20% Similarity=0.417 Sum_probs=37.1
Q ss_pred ccCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 531 YTKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 531 ~~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmI 579 (611)
..+...|+.++.+.+. .++||+.=| |.+++++..+.+.| +|+|.+
T Consensus 200 ~d~~~~w~~i~~lr~~-~~~PvivK~-v~~~e~A~~a~~~G--aD~I~v 244 (352)
T 3sgz_A 200 PKASFCWNDLSLLQSI-TRLPIILKG-ILTKEDAELAMKHN--VQGIVV 244 (352)
T ss_dssp CCTTCCHHHHHHHHHH-CCSCEEEEE-ECSHHHHHHHHHTT--CSEEEE
T ss_pred cCCCCCHHHHHHHHHh-cCCCEEEEe-cCcHHHHHHHHHcC--CCEEEE
Confidence 3456789999998776 489998654 58999999999997 999988
No 474
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=75.61 E-value=49 Score=33.30 Aligned_cols=83 Identities=12% Similarity=-0.019 Sum_probs=53.9
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC--CCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS--LPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~--~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+-+ |. .+..++
T Consensus 22 D~~~l~~lv~~li~-~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~-~~t~~a 87 (294)
T 3b4u_A 22 DIDAMIAHARRCLS-NGCDSVTLFGTT----------GEGCSVGSRERQAILSSFIAAGIAPSRIVTGV--LV-DSIEDA 87 (294)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEEESSTT----------TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE--CC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccc----------cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--CC-ccHHHH
Confidence 55666677776643 489998776432 22222333444567777766653 6777653 32 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 88 i~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 9999999999999988754
No 475
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=75.40 E-value=13 Score=38.38 Aligned_cols=77 Identities=21% Similarity=0.354 Sum_probs=48.6
Q ss_pred ecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccccCCc
Q psy9514 374 QLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGIHKDN 453 (611)
Q Consensus 374 Qi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~~~~~ 453 (611)
.+...+++.+.+.++...+ ||..|-|..|-. . -.+.+++++++.+..+.|-.--++. +.
T Consensus 129 ~~~~~~~e~~~~~a~~~~~--g~~~~K~Kvg~~--------------~----d~~~v~avR~~~~~~l~vDaN~~~t-~~ 187 (338)
T 3ijl_A 129 TIGIDTPDVVRAKTKECAG--LFNILKVKLGRD--------------N----DKEMIETIRSVTDLPIAVDANQGWK-DR 187 (338)
T ss_dssp BCCCCCHHHHHHHHHHHHT--TCSSEEEECSSS--------------C----HHHHHHHHHTTCCCCEEEECTTCCC-CH
T ss_pred EEeCCCHHHHHHHHHHHHh--cccEEEEecCcH--------------H----HHHHHHHHHhhcCCcEEEECcCCCC-CH
Confidence 3445688888777766533 788888775532 1 2467788888876433333222231 24
Q ss_pred hHHHHHHHHHHHcCCCEE
Q psy9514 454 NIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 454 ~~a~~la~~l~~aGvd~I 471 (611)
..+.+++++|++.++.+|
T Consensus 188 ~~A~~~~~~l~~~~i~~i 205 (338)
T 3ijl_A 188 QYALDMIHWLKEKGIVMI 205 (338)
T ss_dssp HHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHhhCCCCEE
Confidence 578899999999886554
No 476
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=75.29 E-value=5 Score=41.75 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=54.7
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~------------------------------------------------L 81 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQ------------------------------------------------L 81 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhh------------------------------------------------C
Confidence 3455778999999999999999998865331 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHH---HHHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTE---SLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~---~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++. +.+.| +|+||+-...+.+|.
T Consensus 82 s~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G--adavlv~~P~Y~~~s 141 (343)
T 2v9d_A 82 GAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAG--ADGIVVINPYYWKVS 141 (343)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHT--CSEEEEECCSSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 1111122333333322 368987 5666655444432 23355 999999999888883
No 477
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=75.28 E-value=5.1 Score=40.48 Aligned_cols=85 Identities=9% Similarity=0.065 Sum_probs=54.2
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+.|.+.+..+ .
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~------------------------------------------------L 48 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGLGPA------------------------------------------------L 48 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhh------------------------------------------------C
Confidence 4456778888889999999998888765320 1
Q ss_pred cCCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhC-C
Q psy9514 532 TKQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTES---LKKSPSISGVMIGRGALIK-P 587 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~d-P 587 (611)
+.......++.+++...+ -|+|.|...+.+-++.. .+.| +|+||+-...+.+ |
T Consensus 49 s~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~~ 105 (286)
T 2r91_A 49 SLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRG--AEAVASLPPYYFPRL 105 (286)
T ss_dssp CHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTT--CSEEEECCSCSSTTC
T ss_pred CHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcC--CCEEEEcCCcCCCCC
Confidence 111122344444555445 44577777665554432 2345 9999999888887 6
No 478
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=75.24 E-value=47 Score=32.40 Aligned_cols=95 Identities=12% Similarity=0.105 Sum_probs=60.4
Q ss_pred ceeeeccc-CchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEc
Q psy9514 370 LFGVQLCG-NNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRT 447 (611)
Q Consensus 370 ~~ivQi~g-~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~ 447 (611)
.+.+-+.+ .+.+++...++.+. ..|+|.||+=.-+ +.. .+...+.+++..+++.. +.|+.+-+|.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~-~~~~D~vElRvD~---------l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~ 71 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHR-IDAIDVLELRIDQ---------FEN---VTVDQVAEMITKLKVMQDSFKLLVTYRT 71 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHT-TTTCSEEEEECTT---------STT---CCHHHHHHHHHHHC---CCSEEEEECCB
T ss_pred eEEEEecCCCCHHHHHHHHHHhh-hcCCCEEEEEecc---------ccc---CCHHHHHHHHHHHHHhccCCCEEEEeec
Confidence 46677888 88888777666654 3489999984322 110 13567888888888877 6899999997
Q ss_pred ccc-----CCchHHHHHHHHHHHc-CCCEEEEEccc
Q psy9514 448 GIH-----KDNNIIHNFMPKFRDW-GASLITLHGRT 477 (611)
Q Consensus 448 g~~-----~~~~~a~~la~~l~~a-Gvd~ItvhgR~ 477 (611)
... .+.+.-.++.+.+.+. ++++|.|--..
T Consensus 72 ~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~ 107 (238)
T 1sfl_A 72 KLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQA 107 (238)
T ss_dssp GGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCT
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccC
Confidence 432 2234455677777776 69999997654
No 479
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=74.52 E-value=4.9 Score=41.27 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=53.8
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+... .
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~------------------------------------------------L 74 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAY------------------------------------------------L 74 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3456778899999999999999888865330 1
Q ss_pred cCCccHHHHHHHHhh-CCCCcEE-EecCCCCHHHHHH---HHHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQL-CSPAPLY-GNGDILSYEDYTE---SLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~-~~~iPVI-gnGgI~s~eda~~---~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.....+.++.+++. ..++||| |.|...+.+-++. +.+.| +|+||+-...+.+|.
T Consensus 75 s~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~s 134 (315)
T 3na8_A 75 SDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG--AEAVMVLPISYWKLN 134 (315)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT--CSEEEECCCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 111112233333332 2468888 5565544444332 22345 999999998888874
No 480
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=74.25 E-value=42 Score=33.60 Aligned_cols=81 Identities=11% Similarity=0.040 Sum_probs=52.1
Q ss_pred hcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCC-EEEEEEccccCCchHHHHHHHHHHHcCCCEE
Q psy9514 393 QMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLP-ITVKTRTGIHKDNNIIHNFMPKFRDWGASLI 471 (611)
Q Consensus 393 ~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~P-vtVKiR~g~~~~~~~a~~la~~l~~aGvd~I 471 (611)
.+|||+|=+ |-...+ ...|+-..+.-..+.+...+++|.+.+..| |.+-+-.|...+...+.+-+.+|.++|+++|
T Consensus 35 ~aG~d~ilv--Gdsl~~-~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaGa~aV 111 (264)
T 1m3u_A 35 DEGLNVMLV--GDSLGM-TVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMV 111 (264)
T ss_dssp HHTCCEEEE--CTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHHTTCSEE
T ss_pred HcCCCEEEE--CHHHHH-HHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHHcCCCEE
Confidence 459999866 333222 234444444455566666777888777755 4554444333355677788888888999999
Q ss_pred EEEcc
Q psy9514 472 TLHGR 476 (611)
Q Consensus 472 tvhgR 476 (611)
.+-+.
T Consensus 112 klEgg 116 (264)
T 1m3u_A 112 KIEGG 116 (264)
T ss_dssp ECCCS
T ss_pred EECCc
Confidence 99775
No 481
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=73.84 E-value=5.8 Score=40.25 Aligned_cols=85 Identities=8% Similarity=0.054 Sum_probs=53.2
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+...++++.+.+.|++.|.+.|.+.+..+ .+
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------Ls 50 (293)
T 1w3i_A 19 KEKLKIHAENLIRKGIDKLFVNGTTGLGPS------------------------------------------------LS 50 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGG------------------------------------------------SC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------CC
Confidence 355678888888999999998888765320 11
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHHH--HcCCCccEEEEcHHhhhC-C
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTESL--KKSPSISGVMIGRGALIK-P 587 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~l--~~G~~aD~VmIGRgaL~d-P 587 (611)
.......++.+++...+ -|+|.|...+.+-++... +.- ++|+||+-...+.+ |
T Consensus 51 ~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~-Gadavlv~~P~y~~~~ 106 (293)
T 1w3i_A 51 PEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDF-DIVGIASYAPYYYPRM 106 (293)
T ss_dssp HHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGS-CCSEEEEECCCSCSSC
T ss_pred HHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCC
Confidence 11122344444444434 345777776555544332 223 49999999998888 6
No 482
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=73.66 E-value=79 Score=31.78 Aligned_cols=83 Identities=12% Similarity=-0.018 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++|=++.+. |-...-..+.-.++++.+.+.+ .+||.+- +|. .+..++
T Consensus 26 D~~~l~~lv~~li-~~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~-~~t~~a 91 (297)
T 3flu_A 26 HYEQLRDLIDWHI-ENGTDGIVAVGTT----------GESATLSVEEHTAVIEAVVKHVAKRVPVIAG--TGA-NNTVEA 91 (297)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCccc----------cCcccCCHHHHHHHHHHHHHHhCCCCcEEEe--CCC-cCHHHH
Confidence 5566667766664 3589998776433 2222223333345566665554 3687775 332 345788
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.+++.|+|++-+..
T Consensus 92 i~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 9999999999999998764
No 483
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=73.61 E-value=59 Score=32.98 Aligned_cols=83 Identities=8% Similarity=0.045 Sum_probs=52.7
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++|=++.+ -|-...-..+.-.++++.+.+.+ .+||.+-+ |. .+..++
T Consensus 27 D~~~l~~lv~~li-~~Gv~gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g~-~~t~~a 92 (309)
T 3fkr_A 27 DLASQKRAVDFMI-DAGSDGLCILAN----------FSEQFAITDDERDVLTRTILEHVAGRVPVIVTT--SH-YSTQVC 92 (309)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEESSG----------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc----------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec--CC-chHHHH
Confidence 5566667766664 358888766532 12222223333355666666555 37887764 32 345678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 93 i~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 9999999999999988753
No 484
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=73.60 E-value=8 Score=39.49 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=23.1
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQ 480 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~q 480 (611)
+.+...++++.+.+.|++.|.+-|.+.+.
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~ 61 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEF 61 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch
Confidence 33556788888999999999999988653
No 485
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=73.59 E-value=16 Score=38.95 Aligned_cols=45 Identities=18% Similarity=0.341 Sum_probs=34.2
Q ss_pred CccHHHHHHHHhhCC-CCcEEEec-CCCCHHHHHHHHHcCCCccEEEE
Q psy9514 534 QADWDYIEKCAQLCS-PAPLYGNG-DILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~-~iPVIgnG-gI~s~eda~~~l~~G~~aD~VmI 579 (611)
+.+|+-.+++.+... ++||.+-= -++++.++.++++.+ .+|.|+|
T Consensus 294 ~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~-a~d~i~i 340 (431)
T 2fym_A 294 ESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG-IANSILI 340 (431)
T ss_dssp TTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTT-CCSEEEE
T ss_pred cccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhC-CCCEEEE
Confidence 346666666665532 68888665 689999999999987 7999987
No 486
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=73.31 E-value=6.6 Score=40.89 Aligned_cols=29 Identities=14% Similarity=0.066 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQ 480 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~q 480 (611)
+.+...++++.+.+.|++.|.+-|.+.+.
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~ 73 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVYCGSMGDW 73 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEESSGGGTG
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccCcCh
Confidence 33557788999999999999998888653
No 487
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=73.17 E-value=14 Score=37.70 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=26.8
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcCCCccEEEEc
Q psy9514 548 SPAPLYGNGDILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 548 ~~iPVIgnGgI~s~eda~~~l~~G~~aD~VmIG 580 (611)
..+.+.++||| +++.+.++.+.| ||.+.+|
T Consensus 250 ~~v~leaSGGI-t~~~i~~~A~tG--VD~IsvG 279 (300)
T 3l0g_A 250 GKSVLEVSGCV-NIRNVRNIALTG--VDYISIG 279 (300)
T ss_dssp TSSEEEEESSC-CTTTHHHHHTTT--CSEEECG
T ss_pred CceEEEEECCC-CHHHHHHHHHcC--CCEEEeC
Confidence 36889999999 799999998887 9999999
No 488
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=73.16 E-value=81 Score=31.77 Aligned_cols=130 Identities=13% Similarity=0.040 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+. ..|+++| +....-|-...-..+.-.++++.+.+.+ .+||.+-+-.. +..++
T Consensus 23 D~~~l~~lv~~li-~~Gv~gl----------~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~---~t~~a 88 (300)
T 3eb2_A 23 RADVMGRLCDDLI-QAGVHGL----------TPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAST---SVADA 88 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSCB----------BTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEES---SHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEE----------EECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC---CHHHH
Q ss_pred HHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccccCCc-
Q psy9514 457 HNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQA- 535 (611)
Q Consensus 457 ~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~~~a- 535 (611)
.++++.++++|+|++-+..-. |.++.
T Consensus 89 i~la~~a~~~Gadavlv~~P~-----------------------------------------------------y~~~~~ 115 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEA-----------------------------------------------------YFPLKD 115 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECC-----------------------------------------------------SSCCCH
T ss_pred HHHHHHHHHcCCCEEEEcCCC-----------------------------------------------------CCCCCH
Q ss_pred --cHHHHHHHHhhCCCCcEEE------ecCCCCHHHHHHHHHcCCCccEE
Q psy9514 536 --DWDYIEKCAQLCSPAPLYG------NGDILSYEDYTESLKKSPSISGV 577 (611)
Q Consensus 536 --~~~~i~~~~k~~~~iPVIg------nGgI~s~eda~~~l~~G~~aD~V 577 (611)
-..+++.++... ++|||. .|--.+++.+.++.+.. ++-+|
T Consensus 116 ~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgi 163 (300)
T 3eb2_A 116 AQIESYFRAIADAV-EIPVVIYTNPQFQRSDLTLDVIARLAEHP-RIRYI 163 (300)
T ss_dssp HHHHHHHHHHHHHC-SSCEEEEECTTTCSSCCCHHHHHHHHTST-TEEEE
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECccccCCCCCHHHHHHHHcCC-CEEEE
No 489
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=73.14 E-value=23 Score=37.90 Aligned_cols=45 Identities=13% Similarity=0.228 Sum_probs=30.6
Q ss_pred CccHHHHHHHHhhCCCCcEEEecC---CCCHHHHHHHHHcCCCccEEEEc
Q psy9514 534 QADWDYIEKCAQLCSPAPLYGNGD---ILSYEDYTESLKKSPSISGVMIG 580 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~~iPVIgnGg---I~s~eda~~~l~~G~~aD~VmIG 580 (611)
+.||+..+++.+.. +.||-..|| ++++.++.++++.+ .+|.|++=
T Consensus 290 ~dD~eg~~~L~~~~-~~pI~ivGDel~vt~~~~~~~~i~~~-a~d~i~iK 337 (428)
T 3tqp_A 290 ENDWAGWKLLTERL-ENKVQLVGDDIFVTNPDILEKGIKKN-IANAILVK 337 (428)
T ss_dssp TTCHHHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHTT-CCSEEEEC
T ss_pred cccHHHHHHHHHhc-CCCcceeccccccCCHHHHHHHHHhC-CCCEEEec
Confidence 34666666666553 434433455 45999999999987 79998864
No 490
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=73.00 E-value=6.4 Score=40.42 Aligned_cols=87 Identities=21% Similarity=0.226 Sum_probs=53.4
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+... .
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~------------------------------------------------L 72 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPT------------------------------------------------L 72 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccc------------------------------------------------c
Confidence 3456778899999999999999888765331 1
Q ss_pred cCCccHHHHHHHHhh-CCCCcEE-EecCCCCHHHHHH---HHHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQL-CSPAPLY-GNGDILSYEDYTE---SLKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~-~~~iPVI-gnGgI~s~eda~~---~l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.....+.++.+++. ..++||| |.|...+.+-++. +.+.| +|+||+--..+.+|.
T Consensus 73 s~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G--adavlv~~P~y~~~~ 132 (315)
T 3si9_A 73 THEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG--ADAVLVVTPYYNRPN 132 (315)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC--CCEEEECCCCCCCCC
Confidence 111112233333332 2468988 5565544444332 22345 999999988888873
No 491
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=72.85 E-value=36 Score=35.62 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=33.3
Q ss_pred cHHHHHHHHhhCCCCcEEEe--cCCCCHHHHHHHHHcCCCccEEEE
Q psy9514 536 DWDYIEKCAQLCSPAPLYGN--GDILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 536 ~~~~i~~~~k~~~~iPVIgn--GgI~s~eda~~~l~~G~~aD~VmI 579 (611)
.++.|+.+.+. .++|||.= |...|++++..+.+.| +|+|.|
T Consensus 175 ~~~~i~~i~~~-~~vPVivK~vG~g~s~~~A~~l~~aG--ad~I~V 217 (368)
T 3vkj_A 175 ALEKLRDISKE-LSVPIIVKESGNGISMETAKLLYSYG--IKNFDT 217 (368)
T ss_dssp HHHHHHHHHTT-CSSCEEEECSSSCCCHHHHHHHHHTT--CCEEEC
T ss_pred HHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHhCC--CCEEEE
Confidence 45677777664 58999973 6557999999999987 999988
No 492
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=72.80 E-value=7.8 Score=39.64 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEcccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQ 480 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~q 480 (611)
+.+...++++.+.+.|++.|.+-|.+.+.
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~ 55 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQ 55 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc
Confidence 34567788999999999999998887653
No 493
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=72.79 E-value=50 Score=33.12 Aligned_cols=83 Identities=12% Similarity=0.045 Sum_probs=51.8
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc--CCCEEEEEEccccCCchHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS--SLPITVKTRTGIHKDNNII 456 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~--~~PvtVKiR~g~~~~~~~a 456 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.+ .+||.+-+ |. .+..++
T Consensus 20 D~~~l~~lv~~li~-~Gv~gl~~~Gtt----------GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~-~~t~~a 85 (292)
T 2ojp_A 20 CRASLKKLIDYHVA-SGTSAIVSVGTT----------GESATLNHDEHADVVMMTLDLADGRIPVIAGT--GA-NATAEA 85 (292)
T ss_dssp CHHHHHHHHHHHHH-HTCCEEEESSTT----------TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccc----------cchhhCCHHHHHHHHHHHHHHhCCCCcEEEec--CC-ccHHHH
Confidence 55666677666643 489998776432 2222223333345566555544 36877653 32 245678
Q ss_pred HHHHHHHHHcCCCEEEEEc
Q psy9514 457 HNFMPKFRDWGASLITLHG 475 (611)
Q Consensus 457 ~~la~~l~~aGvd~Itvhg 475 (611)
.++++.++++|+|++-+..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 9999999999999988764
No 494
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=72.79 E-value=4.9 Score=40.74 Aligned_cols=87 Identities=20% Similarity=0.183 Sum_probs=53.7
Q ss_pred CchHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEeccccccccc
Q psy9514 452 DNNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRY 531 (611)
Q Consensus 452 ~~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~ 531 (611)
+.+...++++.+.+.|++.|.+-|.+.+..+ .
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~------------------------------------------------L 50 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESPT------------------------------------------------L 50 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGGG------------------------------------------------S
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------C
Confidence 3455778888888999999988888755320 1
Q ss_pred cCCccHHHHHHHHhhC-CCCcEE-EecCCCCHHHHHHH---HHcCCCccEEEEcHHhhhCCc
Q psy9514 532 TKQADWDYIEKCAQLC-SPAPLY-GNGDILSYEDYTES---LKKSPSISGVMIGRGALIKPW 588 (611)
Q Consensus 532 ~~~a~~~~i~~~~k~~-~~iPVI-gnGgI~s~eda~~~---l~~G~~aD~VmIGRgaL~dP~ 588 (611)
+.......++.+++.. .++||| |.|...+.+-++.. .+.| +|+||+-...+.+|.
T Consensus 51 s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G--adavlv~~P~y~~~s 110 (292)
T 2vc6_A 51 SKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAG--ADGVLIVSPYYNKPT 110 (292)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT--CSEEEEECCCSSCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcC--CCEEEEcCCCCCCCC
Confidence 1111122333333322 368887 67776655544322 2345 999999998888773
No 495
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=72.77 E-value=77 Score=31.30 Aligned_cols=96 Identities=7% Similarity=0.131 Sum_probs=67.7
Q ss_pred ceeeecccCchHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhc-CCCEEEEEEcc
Q psy9514 370 LFGVQLCGNNPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVS-SLPITVKTRTG 448 (611)
Q Consensus 370 ~~ivQi~g~~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~-~~PvtVKiR~g 448 (611)
.+.+.+.+.+.+++...++.+. ..|+|.||+=.-+ +.. ..+...+.+.+..++..+ +.|+.+-+|..
T Consensus 21 ~Icv~l~~~~~~e~~~~~~~~~-~~~~D~vElRvD~---------l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~ 88 (257)
T 2yr1_A 21 CICAPVVGEDDRKVLREAEEVC-RKQPDLLEWRADF---------FRA--IDDQERVLATANGLRNIAGEIPILFTIRSE 88 (257)
T ss_dssp EEEEEECCSSHHHHHHHHHHHH-HSCCSEEEEEGGG---------CTT--TTCHHHHHHHHHHHHHHSSSCCEEEECCCT
T ss_pred EEEEEecCCCHHHHHHHHHHHh-hcCCCEEEEEeec---------ccc--cCcHHHHHHHHHHHHHhccCCCEEEEEeec
Confidence 4778899999988876666643 3489999984221 100 123567888889999888 79999999974
Q ss_pred cc------CCchHHHHHHHHHHHcC-CCEEEEEccc
Q psy9514 449 IH------KDNNIIHNFMPKFRDWG-ASLITLHGRT 477 (611)
Q Consensus 449 ~~------~~~~~a~~la~~l~~aG-vd~ItvhgR~ 477 (611)
.. .+.+.-.++.+.+.+.| +++|.|--..
T Consensus 89 ~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~ 124 (257)
T 2yr1_A 89 REGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAY 124 (257)
T ss_dssp TTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGG
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 32 23345667788888888 9999997643
No 496
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=72.50 E-value=24 Score=36.95 Aligned_cols=51 Identities=29% Similarity=0.420 Sum_probs=40.8
Q ss_pred HHHHHHHhhCCCCcEEEecCC-CCHHHHHHHHHcCCCccEEEEcHHhhhCCchHHHH
Q psy9514 538 DYIEKCAQLCSPAPLYGNGDI-LSYEDYTESLKKSPSISGVMIGRGALIKPWIFQEI 593 (611)
Q Consensus 538 ~~i~~~~k~~~~iPVIgnGgI-~s~eda~~~l~~G~~aD~VmIGRgaL~dP~lf~ei 593 (611)
+.+..+.+. .++|+++ || +++.-+.++++.| +|.+=|==|-+.++|-|.++
T Consensus 74 ~al~~I~~~-~~vPlva--DiHf~~~lal~a~e~G--~dklRINPGNig~~~~~~~v 125 (366)
T 3noy_A 74 EALEEIVKK-SPMPVIA--DIHFAPSYAFLSMEKG--VHGIRINPGNIGKEEIVREI 125 (366)
T ss_dssp HHHHHHHHH-CSSCEEE--ECCSCHHHHHHHHHTT--CSEEEECHHHHSCHHHHHHH
T ss_pred HHHHHHHhc-CCCCEEE--eCCCCHHHHHHHHHhC--CCeEEECCcccCchhHHHHH
Confidence 445555444 5899985 88 8999999999987 99999999999888777665
No 497
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=72.41 E-value=40 Score=36.05 Aligned_cols=45 Identities=13% Similarity=0.324 Sum_probs=34.6
Q ss_pred CccHHHHHHHHhhCC-CCcEEEecC-CCCHHHHHHHHHcCCCccEEEE
Q psy9514 534 QADWDYIEKCAQLCS-PAPLYGNGD-ILSYEDYTESLKKSPSISGVMI 579 (611)
Q Consensus 534 ~a~~~~i~~~~k~~~-~iPVIgnGg-I~s~eda~~~l~~G~~aD~VmI 579 (611)
+.+|+.++++.+... ++||.+-=. ++++.++.++++.+ .+|.|++
T Consensus 306 ~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~-a~d~i~i 352 (444)
T 1w6t_A 306 ENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEG-AANSILI 352 (444)
T ss_dssp TTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHT-CCSEEEE
T ss_pred hhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcC-CCCEEEE
Confidence 346677777665532 689887666 89999999999987 7999987
No 498
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=72.22 E-value=5.7 Score=40.17 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=51.9
Q ss_pred chHHHHHHHHHHHcCCCEEEEEccccccccccCcChhHHHHHhhhcccCchhhhhcchhhHhcCCceEEecccccccccc
Q psy9514 453 NNIIHNFMPKFRDWGASLITLHGRTREQRYTKQADWDYIEKCAQLCSRDNNIIHNFMPKFRDWGASLITLHGRTREQRYT 532 (611)
Q Consensus 453 ~~~a~~la~~l~~aGvd~ItvhgR~r~qr~~~~adw~~i~~~~~~~~~~~~~~~~~~~~l~~~G~~~itihgrtr~g~~~ 532 (611)
.+...++++.+.+.|++.|.+.|.+.+..+ .+
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~------------------------------------------------Ls 50 (288)
T 2nuw_A 19 VDALKTHAKNLLEKGIDAIFVNGTTGLGPA------------------------------------------------LS 50 (288)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETSTTTTGGG------------------------------------------------SC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhh------------------------------------------------CC
Confidence 345678888888999999988888765320 11
Q ss_pred CCccHHHHHHHHhhCCCCcEEEecCCCCHHHHHHH--HHcCCCccEEEEcHHhhhC-C
Q psy9514 533 KQADWDYIEKCAQLCSPAPLYGNGDILSYEDYTES--LKKSPSISGVMIGRGALIK-P 587 (611)
Q Consensus 533 ~~a~~~~i~~~~k~~~~iPVIgnGgI~s~eda~~~--l~~G~~aD~VmIGRgaL~d-P 587 (611)
.......++.+++...+ -|+|.|...+.+-++.. .+.- ++|+||+--..+.+ |
T Consensus 51 ~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~-Gadavlv~~P~y~~~~ 106 (288)
T 2nuw_A 51 KDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEM-DILGVSSHSPYYFPRL 106 (288)
T ss_dssp HHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTS-CCSEEEECCCCSSCSC
T ss_pred HHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhc-CCCEEEEcCCcCCCCC
Confidence 11122333444444334 34477776655554432 2233 49999999888888 6
No 499
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=72.12 E-value=69 Score=32.47 Aligned_cols=82 Identities=15% Similarity=0.069 Sum_probs=51.4
Q ss_pred chHHHHHHHHHHHHhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcC-CCEEEEEEccccCCchHHH
Q psy9514 379 NPYVLTKCTQLLEEQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSS-LPITVKTRTGIHKDNNIIH 457 (611)
Q Consensus 379 ~p~~~~~aA~~l~~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~-~PvtVKiR~g~~~~~~~a~ 457 (611)
+.+.+.+.++.+.+ .|+++|=++.+- |-...-..+.-.++++.+.+.++ +||.+- +|. .+..++.
T Consensus 27 D~~~l~~lv~~li~-~Gv~Gl~v~GtT----------GE~~~Lt~~Er~~v~~~~v~~~grvpViaG--vg~-~~t~~ai 92 (313)
T 3dz1_A 27 DDVSIDRLTDFYAE-VGCEGVTVLGIL----------GEAPKLDAAEAEAVATRFIKRAKSMQVIVG--VSA-PGFAAMR 92 (313)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEEESTGG----------GTGGGSCHHHHHHHHHHHHHHCTTSEEEEE--CCC-SSHHHHH
T ss_pred CHHHHHHHHHHHHH-CCCCEEEeCccC----------cChhhCCHHHHHHHHHHHHHHcCCCcEEEe--cCC-CCHHHHH
Confidence 55666777766643 588988665321 22222233333456666555543 676664 332 3457889
Q ss_pred HHHHHHHHcCCCEEEEE
Q psy9514 458 NFMPKFRDWGASLITLH 474 (611)
Q Consensus 458 ~la~~l~~aGvd~Itvh 474 (611)
++++.+++.|+|++-+.
T Consensus 93 ~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 99999999999999874
No 500
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=71.80 E-value=52 Score=33.21 Aligned_cols=81 Identities=12% Similarity=0.086 Sum_probs=47.2
Q ss_pred HhcccceEEeccCCCccceeccccccccccChHHHHHHHHHHHhhcCCCEEEEEEccc--c-CCchHHHHHHH-HHHHcC
Q psy9514 392 EQMVVDFVDVNLGCPIEFIYKQGSGSGLLQRANILQSVITCMNEVSSLPITVKTRTGI--H-KDNNIIHNFMP-KFRDWG 467 (611)
Q Consensus 392 ~~~g~D~IELN~gCP~~~v~~~g~GsaLl~r~~~l~eIv~av~~~~~~PvtVKiR~g~--~-~~~~~a~~la~-~l~~aG 467 (611)
+.+|||+|=+ |--..+ ...|+-..+.-..+.+...+++|.+.+..|+.+ .=++. . .+...+.+-+. .++++|
T Consensus 51 e~aG~d~ilv--GdSl~~-~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl~~eaG 126 (281)
T 1oy0_A 51 DEAGIPVLLV--GDSAAN-VVYGYDTTVPISIDELIPLVRGVVRGAPHALVV-ADLPFGSYEAGPTAALAAATRFLKDGG 126 (281)
T ss_dssp HTTTCCEEEE--CTTHHH-HTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTSSTTCHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEE--CHHHHH-HHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCcccCCHHHHHHHHHHHHHHhC
Confidence 3569999832 322221 223444444444555666677777777766655 44433 2 24455555444 455699
Q ss_pred CCEEEEEcc
Q psy9514 468 ASLITLHGR 476 (611)
Q Consensus 468 vd~ItvhgR 476 (611)
+++|.+-+.
T Consensus 127 a~aVklEdg 135 (281)
T 1oy0_A 127 AHAVKLEGG 135 (281)
T ss_dssp CSEEEEEBS
T ss_pred CeEEEECCc
Confidence 999999876
Done!