BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9518
(132 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307203528|gb|EFN82561.1| tRNA-dihydrouridine synthase 3-like [Harpegnathos saltator]
Length = 660
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/132 (78%), Positives = 119/132 (90%), Gaps = 1/132 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKE+KL DI S ERFDIL++Y NYGLEHWGSDTRGVETTRRF+LEW
Sbjct: 529 IGRGALIKPWIFTEIKERKLIDIPSGERFDILRKYANYGLEHWGSDTRGVETTRRFMLEW 588
Query: 62 LSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+SFLHRY+PVG+LE Q++N+RPP Y GRN++ETLM SSNC+DW+K+SEMLLGK+P GF
Sbjct: 589 ISFLHRYVPVGILERPPQRINERPPFYRGRNDMETLMASSNCADWVKLSEMLLGKVPDGF 648
Query: 121 SFLPKHKANSWK 132
FLPKHKANSWK
Sbjct: 649 HFLPKHKANSWK 660
>gi|383851178|ref|XP_003701116.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Megachile rotundata]
Length = 640
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 104/132 (78%), Positives = 120/132 (90%), Gaps = 1/132 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKE+KL DISS ERF+ILK+Y NYGLEHWGSDTRGVETTRRF+LEW
Sbjct: 509 IGRGALIKPWIFTEIKERKLIDISSNERFEILKKYANYGLEHWGSDTRGVETTRRFMLEW 568
Query: 62 LSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+SFLHRY+PVG+LE Q++N+RPP Y GR+E+ETLM SSNC+DWIK+SE+LLGK+P GF
Sbjct: 569 ISFLHRYVPVGILERPPQRINERPPFYRGRDEMETLMASSNCADWIKLSELLLGKVPEGF 628
Query: 121 SFLPKHKANSWK 132
FLPKHKANSWK
Sbjct: 629 HFLPKHKANSWK 640
>gi|350411344|ref|XP_003489316.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Bombus impatiens]
Length = 651
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/132 (78%), Positives = 120/132 (90%), Gaps = 1/132 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKEKKL DISS+ERF+IL++Y YGLEHWGSDTRGVETTRRF+LEW
Sbjct: 520 IGRGALIKPWIFTEIKEKKLIDISSSERFEILRKYSKYGLEHWGSDTRGVETTRRFMLEW 579
Query: 62 LSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+SFLHRYIPVG+LE Q++N+RPP Y GR+++ETLM SSNC+DWIK+SEMLLGK+P GF
Sbjct: 580 ISFLHRYIPVGILEKPPQRINERPPFYRGRDDMETLMASSNCADWIKLSEMLLGKVPEGF 639
Query: 121 SFLPKHKANSWK 132
FLPKHKANSWK
Sbjct: 640 HFLPKHKANSWK 651
>gi|340729664|ref|XP_003403117.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase 3-like
[Bombus terrestris]
Length = 651
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/132 (78%), Positives = 120/132 (90%), Gaps = 1/132 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKEKKL DISS+ERF+IL++Y YGLEHWGSDTRGVETTRRF+LEW
Sbjct: 520 IGRGALIKPWIFTEIKEKKLIDISSSERFEILRKYSKYGLEHWGSDTRGVETTRRFMLEW 579
Query: 62 LSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+SFLHRYIPVG+LE Q++N+RPP Y GR+++ETLM SSNC+DWIK+SEMLLGK+P GF
Sbjct: 580 ISFLHRYIPVGILEKPPQRINERPPFYRGRDDMETLMASSNCADWIKLSEMLLGKVPEGF 639
Query: 121 SFLPKHKANSWK 132
FLPKHKANSWK
Sbjct: 640 HFLPKHKANSWK 651
>gi|328778500|ref|XP_393458.4| PREDICTED: tRNA-dihydrouridine synthase 3-like [Apis mellifera]
Length = 642
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/132 (79%), Positives = 119/132 (90%), Gaps = 1/132 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKEKKL DISS ERF+ILK+Y YGLEHWGSDTRGVETTRRF+LEW
Sbjct: 511 IGRGALIKPWIFTEIKEKKLIDISSTERFEILKKYSKYGLEHWGSDTRGVETTRRFMLEW 570
Query: 62 LSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+SFLHRYIPVG+LE Q++N+RPP Y GR+++ETLM SSNC+DWIK+SEMLLGK+P GF
Sbjct: 571 ISFLHRYIPVGILERPPQRINERPPFYKGRDDMETLMASSNCADWIKLSEMLLGKVPKGF 630
Query: 121 SFLPKHKANSWK 132
FLPKHKANSWK
Sbjct: 631 HFLPKHKANSWK 642
>gi|380017191|ref|XP_003692544.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Apis
florea]
Length = 642
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/132 (79%), Positives = 119/132 (90%), Gaps = 1/132 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKEKKL DISS ERF+ILK+Y YGLEHWGSDTRGVETTRRF+LEW
Sbjct: 511 IGRGALIKPWIFTEIKEKKLIDISSTERFEILKKYSKYGLEHWGSDTRGVETTRRFMLEW 570
Query: 62 LSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+SFLHRYIPVG+LE Q++N+RPP Y GR+++ETLM SSNC+DWIK+SEMLLGK+P GF
Sbjct: 571 ISFLHRYIPVGILERPPQRINERPPFYKGRDDMETLMASSNCADWIKLSEMLLGKVPKGF 630
Query: 121 SFLPKHKANSWK 132
FLPKHKANSWK
Sbjct: 631 HFLPKHKANSWK 642
>gi|332028941|gb|EGI68959.1| tRNA-dihydrouridine synthase 3-like protein [Acromyrmex echinatior]
Length = 665
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 120/140 (85%), Gaps = 9/140 (6%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKE+KL DISSAERFDILK+Y NYGLEHWGSDTRGVE TRRF+LEW
Sbjct: 526 IGRGALIKPWIFTEIKERKLIDISSAERFDILKKYANYGLEHWGSDTRGVENTRRFMLEW 585
Query: 62 LSFLHR--------YIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEML 112
+SFLHR YIPVG+LE Q++N+RPP Y GR+++ETLM SSNC+DW+K+SEML
Sbjct: 586 ISFLHRQVYLEKNVYIPVGILERPPQRINERPPFYRGRDDMETLMASSNCADWVKLSEML 645
Query: 113 LGKIPAGFSFLPKHKANSWK 132
LGK+P GF FLPKHKANSWK
Sbjct: 646 LGKVPDGFRFLPKHKANSWK 665
>gi|270007852|gb|EFA04300.1| hypothetical protein TcasGA2_TC014592 [Tribolium castaneum]
Length = 548
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/133 (76%), Positives = 118/133 (88%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE+KL+DISS+ERFD+LK+Y NYGLEHWGSD +GVE TRRFLLE
Sbjct: 416 MIGRGALIKPWIFTEIKEQKLWDISSSERFDLLKKYTNYGLEHWGSDNKGVENTRRFLLE 475
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE QK+N+RPP Y GR++LETLM S++ SDW+KISEMLLG +P
Sbjct: 476 WLSFLHRYVPVGLLEKPPQKINERPPFYQGRDDLETLMASTSASDWVKISEMLLGPVPEN 535
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANS+K
Sbjct: 536 FQFLPKHKANSYK 548
>gi|357605297|gb|EHJ64545.1| putative dihydrouridine synthase 3-like protein [Danaus plexippus]
Length = 588
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 118/132 (89%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE+KL+DISS ERF+I+K++ +GLEHWGSDT+GVE TRRFLLE
Sbjct: 457 MIGRGALIKPWIFNEIKEQKLYDISSHERFEIIKKFTKFGLEHWGSDTQGVENTRRFLLE 516
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL+RYIPVGLLE QK+N+RPP+Y GRN+LETLM S NC+DW+KISEM+LG +P G
Sbjct: 517 WLSFLYRYIPVGLLERPPQKINERPPLYFGRNDLETLMASGNCADWVKISEMVLGPVPDG 576
Query: 120 FSFLPKHKANSW 131
F FLPKHKANS+
Sbjct: 577 FKFLPKHKANSY 588
>gi|291242586|ref|XP_002741186.1| PREDICTED: CG3645-like [Saccoglossus kowalevskii]
Length = 599
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 118/133 (88%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS+ERFDIL+++ NYGLEHWGSD +GV+ TRRFLLE
Sbjct: 467 MIARGALIKPWVFTEIKEQRHWDISSSERFDILRDFTNYGLEHWGSDQQGVDRTRRFLLE 526
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL+RYIPVG+LES QK+NQRPP Y GR++LETLM S NC DW+KISEMLLG +P+G
Sbjct: 527 WLSFLYRYIPVGILESIPQKINQRPPCYFGRDDLETLMASPNCGDWVKISEMLLGPVPSG 586
Query: 120 FSFLPKHKANSWK 132
F FLPKH+ANS+K
Sbjct: 587 FEFLPKHRANSYK 599
>gi|427782685|gb|JAA56794.1| Putative trna-dihydrouridine synthase translation [Rhipicephalus
pulchellus]
Length = 553
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 98/132 (74%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DISS+ER DIL++Y YGL+HWGSDT GVE TRRFLLE
Sbjct: 420 MIARGALIKPWIFTEIKEKRHWDISSSERLDILRKYTAYGLDHWGSDTEGVERTRRFLLE 479
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIPVGLLE QK+N+RPP Y GR++LETL S +C+DW+KISEMLLG +P G
Sbjct: 480 WLSFLHRYIPVGLLEVLPQKINERPPPYRGRDDLETLFASPSCADWLKISEMLLGPLPEG 539
Query: 120 FSFLPKHKANSW 131
FSFLPKHKAN++
Sbjct: 540 FSFLPKHKANAY 551
>gi|158299928|ref|XP_319936.4| AGAP009171-PA [Anopheles gambiae str. PEST]
gi|157013754|gb|EAA14958.4| AGAP009171-PA [Anopheles gambiae str. PEST]
Length = 599
Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 94/132 (71%), Positives = 115/132 (87%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+FQEIKE+K D SS ERF++LK YVNYGLEHWGSDT+GVETTRRFLLE
Sbjct: 468 MVGRGALIKPWVFQEIKERKTLDPSSGERFEMLKRYVNYGLEHWGSDTKGVETTRRFLLE 527
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RY+P GLLE Q++N+RP Y GR++LETLM S NC+DW+K+SEMLLG +P G
Sbjct: 528 WQSFLYRYVPYGLLERPPQRINERPDAYRGRDDLETLMASPNCNDWVKLSEMLLGPVPEG 587
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 588 FNFVPKHKANAY 599
>gi|427794589|gb|JAA62746.1| Putative trna-dihydrouridine synthase translation, partial
[Rhipicephalus pulchellus]
Length = 554
Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 98/132 (74%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DISS+ER DIL++Y YGL+HWGSDT GVE TRRFLLE
Sbjct: 421 MIARGALIKPWIFTEIKEKRHWDISSSERLDILRKYTAYGLDHWGSDTEGVERTRRFLLE 480
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIPVGLLE QK+N+RPP Y GR++LETL S +C+DW+KISEMLLG +P G
Sbjct: 481 WLSFLHRYIPVGLLEVLPQKINERPPPYRGRDDLETLFASPSCADWLKISEMLLGPLPEG 540
Query: 120 FSFLPKHKANSW 131
FSFLPKHKAN++
Sbjct: 541 FSFLPKHKANAY 552
>gi|193636409|ref|XP_001949454.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Acyrthosiphon
pisum]
Length = 578
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/133 (75%), Positives = 116/133 (87%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+E+KE +DISS ER +ILK+YV YGLEHWGSDTRGVETTR+FLLE
Sbjct: 446 MIGRGALIKPWIFKELKENCHWDISSNERLEILKKYVKYGLEHWGSDTRGVETTRKFLLE 505
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RYIPVG+LE QK+N+RPP Y GR++LETLM S NC+DWI+IS+MLLG +P G
Sbjct: 506 WLSFCYRYIPVGILERVPQKVNERPPHYKGRDDLETLMASGNCADWIEISKMLLGPVPNG 565
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANSWK
Sbjct: 566 FQFLPKHKANSWK 578
>gi|340377885|ref|XP_003387459.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Amphimedon
queenslandica]
Length = 560
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/132 (75%), Positives = 117/132 (88%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DISS+ER IL++Y +YGLEHWGSDT+G+E TRRFLLE
Sbjct: 417 MIARGALIKPWIFTEIKEKRHWDISSSERLSILQDYAHYGLEHWGSDTQGIERTRRFLLE 476
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE QK+N+RPP Y GR+ELETLM+S NC+DWIKISEMLLG +P+
Sbjct: 477 WLSFLHRYVPVGLLERLPQKINERPPYYQGRDELETLMSSRNCNDWIKISEMLLGPVPSN 536
Query: 120 FSFLPKHKANSW 131
F+FLPKHKANS+
Sbjct: 537 FNFLPKHKANSY 548
>gi|390359026|ref|XP_793440.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Strongylocentrotus purpuratus]
Length = 628
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 95/133 (71%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS+ERFDIL++Y+N GL HWGSD+ GV TRRFLLE
Sbjct: 496 MIARGALIKPWIFTEIKEQRHWDISSSERFDILQDYINLGLLHWGSDSEGVRKTRRFLLE 555
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIPVGLLE+ QK+N+RPP Y GR++LETLM S+NC+DW+KISEM LG +P
Sbjct: 556 WLSFLHRYIPVGLLETLPQKINERPPYYVGRDDLETLMASANCADWVKISEMFLGPVPDD 615
Query: 120 FSFLPKHKANSWK 132
F FL KHKA+S+K
Sbjct: 616 FQFLAKHKASSYK 628
>gi|326934323|ref|XP_003213240.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Meleagris
gallopavo]
Length = 667
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 97/133 (72%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS+ERFDILK++ NYGLEHWGSDT+GVE TR+FLLE
Sbjct: 535 MIARGALIKPWLFTEIKEQRHWDISSSERFDILKDFTNYGLEHWGSDTQGVEKTRKFLLE 594
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWIKISE+LLG +P
Sbjct: 595 WLSFLCRYIPVGLLEHLPQKINERPPYYIGRDYLETLMASQNVDDWIKISELLLGPVPTN 654
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS++
Sbjct: 655 FTFLPKHKANSYR 667
>gi|242013989|ref|XP_002427681.1| tRNA-dihydrouridine synthase, putative [Pediculus humanus corporis]
gi|212512111|gb|EEB14943.1| tRNA-dihydrouridine synthase, putative [Pediculus humanus corporis]
Length = 557
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGAL KPWIF+EIKE+K +DISS+ERFDI+K++VNYGL+HWGSDT GVE TR+F LE
Sbjct: 424 MVGRGALYKPWIFKEIKEQKNWDISSSERFDIIKKFVNYGLDHWGSDTMGVELTRKFTLE 483
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL+RYIPVGLLE QK+N+RPP Y GRN+LETLM S NC+DW+KI+EMLLG +P
Sbjct: 484 WLSFLYRYIPVGLLERPPQKINERPPKYFGRNDLETLMASPNCADWVKITEMLLGPVPDD 543
Query: 120 FSFLPKHKANSW 131
F FLPKHKAN+W
Sbjct: 544 FHFLPKHKANAW 555
>gi|193788568|ref|NP_001123329.1| zinc finger protein ZF(C3H)-5 [Ciona intestinalis]
gi|93003036|tpd|FAA00101.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 609
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER DIL+++VN G HWGSDTRGVE TRRFLLE
Sbjct: 477 MIARGALIKPWVFTEIKERRDWDISSGERLDILRQFVNEGFVHWGSDTRGVENTRRFLLE 536
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIPVGLLE Q++N+RPP Y GRN+LETLM S+N +DW+KISEMLLGK+P
Sbjct: 537 WLSFLHRYIPVGLLERLPQRINERPPYYVGRNDLETLMGSANSNDWVKISEMLLGKVPDS 596
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANS+K
Sbjct: 597 FQFLPKHKANSYK 609
>gi|170049778|ref|XP_001870922.1| tRNA-dihydrouridine synthase [Culex quinquefasciatus]
gi|167871506|gb|EDS34889.1| tRNA-dihydrouridine synthase [Culex quinquefasciatus]
Length = 590
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 95/132 (71%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIFQEIKE+K D SS+ER ++LK YVNYGLEHWGSDT+GVE TRRFLLE
Sbjct: 459 MIGRGALVKPWIFQEIKEQKALDPSSSERMEMLKRYVNYGLEHWGSDTKGVENTRRFLLE 518
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFLHRY+P GLLE Q++NQRP + GR++LETLM S N SDW+K+SEMLLG +P G
Sbjct: 519 WQSFLHRYVPYGLLERPPQRINQRPEPFRGRDDLETLMASPNSSDWVKLSEMLLGPVPDG 578
Query: 120 FSFLPKHKANSW 131
F+F+PKHKANS+
Sbjct: 579 FNFVPKHKANSY 590
>gi|354479216|ref|XP_003501809.1| PREDICTED: tRNA-dihydrouridine synthase 3 [Cricetulus griseus]
Length = 646
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 514 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 573
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 574 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDHLETLMASQQAADWIRISEMLLGPVPPG 633
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 634 FAFLPKHKANAYK 646
>gi|224087931|ref|XP_002195720.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Taeniopygia guttata]
Length = 718
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 96/133 (72%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS+ERF+ILK++ NYGLEHWGSDT+GVE TR+FLLE
Sbjct: 586 MIARGALIKPWLFTEIKEQRHWDISSSERFEILKDFTNYGLEHWGSDTQGVEKTRKFLLE 645
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWIKISE+LLG +P
Sbjct: 646 WLSFLCRYIPVGLLEHLPQKINERPPYYLGRDYLETLMASQNVDDWIKISELLLGPVPPS 705
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS++
Sbjct: 706 FTFLPKHKANSYR 718
>gi|157115267|ref|XP_001658172.1| tRNA-dihydrouridine synthase [Aedes aegypti]
gi|108883495|gb|EAT47720.1| AAEL001171-PA [Aedes aegypti]
Length = 578
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 95/132 (71%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+FQEIKE+K D SS+ER D+LK YVNYGLEHWGSDT+GVE TRRFLLE
Sbjct: 447 MVGRGALIKPWVFQEIKEQKNLDPSSSERMDMLKRYVNYGLEHWGSDTKGVENTRRFLLE 506
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RY+P GLLE QK+NQRP + GR++LETLM S NCSDW+K+SEMLLG +P
Sbjct: 507 WQSFLYRYVPSGLLERPPQKINQRPEAFRGRDDLETLMASPNCSDWVKLSEMLLGPVPDS 566
Query: 120 FSFLPKHKANSW 131
F+F+PKHKANS+
Sbjct: 567 FNFVPKHKANSY 578
>gi|344306054|ref|XP_003421704.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase 3-like
[Loxodonta africana]
Length = 659
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 94/133 (70%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 527 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 586
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE QK+N+RPP Y GRN LETLM S N +DW++ISEMLLG +P
Sbjct: 587 WLSFLCRYVPVGLLERLPQKINERPPYYLGRNYLETLMASQNSADWVRISEMLLGPVPPN 646
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANS+K
Sbjct: 647 FVFLPKHKANSYK 659
>gi|356508136|ref|XP_003522816.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Glycine max]
Length = 706
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 92/132 (69%), Positives = 115/132 (87%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DISS ER +ILK++VN+GLEHWGSDT+GVETTRRFLLE
Sbjct: 569 MVARGALIKPWIFTEIKEQRHWDISSGERLNILKDFVNFGLEHWGSDTKGVETTRRFLLE 628
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y+GR+ELETLM S + +DWI+ISEMLLGK+P G
Sbjct: 629 WLSYTFRYIPVGLLDVVPQRLNWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDG 688
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 689 FTFAPKHKSNAY 700
>gi|443697303|gb|ELT97828.1| hypothetical protein CAPTEDRAFT_165435 [Capitella teleta]
Length = 316
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/133 (72%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DIS+ ER D+L+E+ N GL HWGSDT+GV TTRRFLLE
Sbjct: 184 MIARGALIKPWIFTEIKEQRHWDISAPERLDLLREFTNCGLTHWGSDTQGVATTRRFLLE 243
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIPVG+LE QK+N+RPP Y RN+LET+M SSNC DWIKISE+LLG +P G
Sbjct: 244 WLSFLHRYIPVGVLERVPQKINERPPSYFCRNDLETMMASSNCGDWIKISELLLGPVPDG 303
Query: 120 FSFLPKHKANSWK 132
FSFLPKHKANS++
Sbjct: 304 FSFLPKHKANSYQ 316
>gi|395512873|ref|XP_003760658.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Sarcophilus harrisii]
Length = 679
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 95/133 (71%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER DIL+++ NYGLEHWGSDT+GVE TR+FLLE
Sbjct: 547 MIARGALIKPWLFTEIKEQRHWDISSGERLDILRDFTNYGLEHWGSDTQGVEKTRKFLLE 606
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWI ISEMLLG +P
Sbjct: 607 WLSFLCRYIPVGLLEHLPQKINERPPYYLGRDHLETLMASQNVDDWISISEMLLGPVPPA 666
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS++
Sbjct: 667 FTFLPKHKANSYR 679
>gi|332263177|ref|XP_003280631.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
isoform 1 [Nomascus leucogenys]
Length = 649
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 517 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 576
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 577 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 636
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 637 FAFLPKHKANAYK 649
>gi|81902404|sp|Q91XI1.1|DUS3L_MOUSE RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|15192726|gb|AAK84684.1| putative zinc finger protein [Mus musculus]
Length = 637
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 505 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 564
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 565 WLSFLCRYVPVGLLERPPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 624
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 625 FVFLPKHKANAYK 637
>gi|255003775|ref|NP_659107.2| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Mus musculus]
gi|74186083|dbj|BAE34157.1| unnamed protein product [Mus musculus]
gi|148706257|gb|EDL38204.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_d [Mus
musculus]
Length = 637
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 505 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 564
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 565 WLSFLCRYVPVGLLERPPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 624
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 625 FVFLPKHKANAYK 637
>gi|395750277|ref|XP_002828550.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Pongo
abelii]
Length = 637
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 505 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 564
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 565 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 624
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 625 FAFLPKHKANAYK 637
>gi|14602971|gb|AAH09973.1| Dihydrouridine synthase 3-like (S. cerevisiae) [Homo sapiens]
gi|190690551|gb|ACE87050.1| dihydrouridine synthase 3-like (S. cerevisiae) protein [synthetic
construct]
gi|190691915|gb|ACE87732.1| dihydrouridine synthase 3-like (S. cerevisiae) protein [synthetic
construct]
Length = 650
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 518 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 577
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 578 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 637
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 638 FAFLPKHKANAYK 650
>gi|10436076|dbj|BAB14740.1| unnamed protein product [Homo sapiens]
Length = 650
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 518 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 577
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 578 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 637
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 638 FAFLPKHKANAYK 650
>gi|14249957|gb|AAH08362.1| DUS3L protein, partial [Homo sapiens]
Length = 613
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 481 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 540
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 541 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 600
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 601 FAFLPKHKANAYK 613
>gi|239788462|ref|NP_064560.2| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform 1 [Homo
sapiens]
gi|110808212|sp|Q96G46.2|DUS3L_HUMAN RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
Length = 650
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 518 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 577
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 578 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 637
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 638 FAFLPKHKANAYK 650
>gi|403295958|ref|XP_003938888.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Saimiri boliviensis boliviensis]
Length = 663
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLL+
Sbjct: 531 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLQ 590
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S DWI+ISEMLLG +P
Sbjct: 591 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKADDWIRISEMLLGPVPPN 650
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 651 FTFLPKHKANAYK 663
>gi|410225896|gb|JAA10167.1| dihydrouridine synthase 3-like [Pan troglodytes]
gi|410330749|gb|JAA34321.1| dihydrouridine synthase 3-like [Pan troglodytes]
Length = 654
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 522 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 581
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 582 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 641
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 642 FAFLPKHKANAYK 654
>gi|397497105|ref|XP_003819357.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Pan
paniscus]
Length = 654
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 522 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 581
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 582 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 641
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 642 FAFLPKHKANAYK 654
>gi|189055070|dbj|BAG38054.1| unnamed protein product [Homo sapiens]
Length = 650
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 518 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 577
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 578 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 637
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 638 FAFLPKHKANAYK 650
>gi|149028168|gb|EDL83606.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_c
[Rattus norvegicus]
Length = 640
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 508 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 567
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 568 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 627
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 628 FVFLPKHKANAYK 640
>gi|410306978|gb|JAA32089.1| dihydrouridine synthase 3-like [Pan troglodytes]
Length = 654
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 522 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 581
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 582 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 641
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 642 FAFLPKHKANAYK 654
>gi|77917548|ref|NP_001030095.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Rattus
norvegicus]
gi|110808213|sp|Q3KRC5.1|DUS3L_RAT RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|77415407|gb|AAI05781.1| Dihydrouridine synthase 3-like (S. cerevisiae) [Rattus norvegicus]
Length = 640
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 508 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 567
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 568 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 627
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 628 FVFLPKHKANAYK 640
>gi|355755356|gb|EHH59103.1| tRNA-dihydrouridine synthase 3-like protein [Macaca fascicularis]
Length = 654
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 522 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 581
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 582 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 641
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 642 FVFLPKHKANAYK 654
>gi|156387454|ref|XP_001634218.1| predicted protein [Nematostella vectensis]
gi|156221299|gb|EDO42155.1| predicted protein [Nematostella vectensis]
Length = 570
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/132 (71%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGA+IKPWIF EIKE++ +DISS+ER DIL+++VN GLEHWGSDT+GVE TRRFLLE
Sbjct: 434 MIARGAIIKPWIFTEIKEQRHWDISSSERLDILRQFVNAGLEHWGSDTQGVEKTRRFLLE 493
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVGLLE Q++N RPP Y GRN+LETLM S NC DW+KISEMLLG +P
Sbjct: 494 WLSFTCRYVPVGLLERLPQRINDRPPAYFGRNDLETLMASPNCEDWVKISEMLLGPVPTT 553
Query: 120 FSFLPKHKANSW 131
F+FLPKHKANS+
Sbjct: 554 FAFLPKHKANSY 565
>gi|355703026|gb|EHH29517.1| tRNA-dihydrouridine synthase 3-like protein [Macaca mulatta]
Length = 637
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 505 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 564
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 565 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 624
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 625 FVFLPKHKANAYK 637
>gi|296232631|ref|XP_002761660.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Callithrix jacchus]
Length = 651
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLL+
Sbjct: 519 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLQ 578
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S DWI+ISEMLLG +P
Sbjct: 579 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKADDWIRISEMLLGPVPPN 638
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 639 FTFLPKHKANAYK 651
>gi|348550668|ref|XP_003461153.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Cavia porcellus]
Length = 641
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 509 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 568
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 569 WLSFLCRYVPVGLLEVLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPN 628
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 629 FAFLPKHKANAYK 641
>gi|426386783|ref|XP_004059860.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
isoform 1 [Gorilla gorilla gorilla]
Length = 653
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+ + NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 521 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRGFTNYGLEHWGSDTQGVEKTRRFLLE 580
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 581 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQRAADWIRISEMLLGPVPPN 640
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 641 FAFLPKHKANAYK 653
>gi|89272495|emb|CAJ83250.1| dihydrouridine synthase 3-like protein [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS ERFDILK++ NYGLEHWGSD +GVE TRRF+LE
Sbjct: 507 MLARGALLKPWLFTEIKEQRHWDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRRFMLE 566
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIP+GLLE QK+N+RPP Y GR+ +ETLM S N +DWIKISEMLLG +P
Sbjct: 567 WLSFLCRYIPIGLLEHVPQKINERPPYYMGRDYMETLMASQNVTDWIKISEMLLGPVPPN 626
Query: 120 FSFLPKHKANSWK 132
FSFLPKHKANS+K
Sbjct: 627 FSFLPKHKANSYK 639
>gi|45361515|ref|NP_989334.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Xenopus
(Silurana) tropicalis]
gi|110808214|sp|Q28BT8.2|DUS3L_XENTR RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|39850298|gb|AAH64263.1| dihydrouridine synthase 3-like protein [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS ERFDILK++ NYGLEHWGSD +GVE TRRF+LE
Sbjct: 507 MLARGALLKPWLFTEIKEQRHWDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRRFMLE 566
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIP+GLLE QK+N+RPP Y GR+ +ETLM S N +DWIKISEMLLG +P
Sbjct: 567 WLSFLCRYIPIGLLEHVPQKINERPPYYMGRDYMETLMASQNVTDWIKISEMLLGPVPPN 626
Query: 120 FSFLPKHKANSWK 132
FSFLPKHKANS+K
Sbjct: 627 FSFLPKHKANSYK 639
>gi|348530032|ref|XP_003452515.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Oreochromis
niloticus]
Length = 627
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/133 (74%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE + +DISS+ER DILK++ N+GLEHWGSDTRGVE TR FLLE
Sbjct: 495 MIARGALIKPWIFTEIKESRHWDISSSERLDILKDFSNFGLEHWGSDTRGVERTRTFLLE 554
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GRN LETLM S N DWI+ISEMLLG +P
Sbjct: 555 WLSFLCRYIPVGLLERVPQKINERPPYYMGRNYLETLMASQNVEDWIRISEMLLGPVPKN 614
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANS+K
Sbjct: 615 FEFLPKHKANSYK 627
>gi|329663208|ref|NP_001193247.1| tRNA-dihydrouridine synthase 3-like [Bos taurus]
gi|296485774|tpg|DAA27889.1| TPA: Dihydrouridine synthase 3-like protein [Bos taurus]
Length = 650
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 518 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 577
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 578 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 637
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 638 FVFLPKHKANAYK 650
>gi|351712194|gb|EHB15113.1| tRNA-dihydrouridine synthase 3-like protein [Heterocephalus glaber]
Length = 645
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 513 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 572
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 573 WLSFLCRYVPVGLLELLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPN 632
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 633 FAFLPKHKANAYK 645
>gi|332852051|ref|XP_001146456.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
isoform 4 [Pan troglodytes]
Length = 654
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 522 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 581
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 582 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 641
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 642 FAFLPKHKANAYK 654
>gi|332263179|ref|XP_003280632.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
isoform 2 [Nomascus leucogenys]
Length = 408
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 276 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 335
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 336 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 395
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 396 FAFLPKHKANAYK 408
>gi|239788483|ref|NP_001155091.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform 2 [Homo
sapiens]
gi|13528705|gb|AAH04549.1| DUS3L protein [Homo sapiens]
gi|119589550|gb|EAW69144.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_c [Homo
sapiens]
gi|325463133|gb|ADZ15337.1| dihydrouridine synthase 3-like (S. cerevisiae) [synthetic
construct]
Length = 408
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 276 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 335
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 336 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 395
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 396 FAFLPKHKANAYK 408
>gi|147903417|ref|NP_001079662.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Xenopus laevis]
gi|82176436|sp|Q7ZWS1.1|DUS3L_XENLA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|28436916|gb|AAH46730.1| MGC53781 protein [Xenopus laevis]
Length = 640
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL KPW+F EIKE++ +DISS ERFDILK++ NYGLEHWGSD +GVE TR+F+LE
Sbjct: 508 MLARGALFKPWLFTEIKEQRHWDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRKFMLE 567
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N +DWIKISEMLLG +P
Sbjct: 568 WLSFLCRYIPVGLLEHVPQKINERPPYYMGRDYLETLMASQNVTDWIKISEMLLGPVPPN 627
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS+K
Sbjct: 628 FTFLPKHKANSYK 640
>gi|395850935|ref|XP_003798027.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Otolemur garnettii]
Length = 644
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRF+LE
Sbjct: 512 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTDYGLEHWGSDTQGVEKTRRFMLE 571
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S SDWI+ISEMLLG +P
Sbjct: 572 WLSFLCRYVPVGLLEQLPQRINERPPYYLGRDYLETLMASQKASDWIRISEMLLGPVPPN 631
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 632 FVFLPKHKANAYK 644
>gi|363743705|ref|XP_425899.3| PREDICTED: tRNA-dihydrouridine synthase 3-like [Gallus gallus]
Length = 641
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS+ERFDIL+++ NYGLEHWGSDT+GVE TR+FLLE
Sbjct: 509 MIARGALIKPWLFTEIKEQRHWDISSSERFDILRDFTNYGLEHWGSDTQGVEKTRKFLLE 568
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWIKISE+LLG +P
Sbjct: 569 WLSFLCRYIPVGLLEHLPQKINERPPYYIGRDYLETLMASQNVDDWIKISELLLGPVPTN 628
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS++
Sbjct: 629 FTFLPKHKANSYR 641
>gi|195995959|ref|XP_002107848.1| hypothetical protein TRIADDRAFT_49631 [Trichoplax adhaerens]
gi|190588624|gb|EDV28646.1| hypothetical protein TRIADDRAFT_49631 [Trichoplax adhaerens]
Length = 581
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 115/133 (86%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DIS+ ERF+ L++YVNYGLEHWGSD+ GVE TRRFLLE
Sbjct: 449 MIARGALIKPWLFTEIKERRHWDISANERFEFLRKYVNYGLEHWGSDSLGVEKTRRFLLE 508
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIP+G+LE Q++N RPP Y GRN+LET+M+S++C+ W+K+SEMLLG +P
Sbjct: 509 WLSFLHRYIPIGVLERVPQRINDRPPYYVGRNDLETMMSSTDCTVWVKLSEMLLGSVPTN 568
Query: 120 FSFLPKHKANSWK 132
F FLPKH+ANS++
Sbjct: 569 FQFLPKHRANSYQ 581
>gi|260828450|ref|XP_002609176.1| hypothetical protein BRAFLDRAFT_92533 [Branchiostoma floridae]
gi|229294531|gb|EEN65186.1| hypothetical protein BRAFLDRAFT_92533 [Branchiostoma floridae]
Length = 578
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS ERF ILK++ NYGLEHWGSDT+GVE TRRF+LE
Sbjct: 446 MIARGALIKPWIFTEIKEQRHWDISSHERFQILKDFSNYGLEHWGSDTQGVEKTRRFMLE 505
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVG+LE QK+N RPP + GR++LETLM S NC+DW+++SEMLLG PA
Sbjct: 506 WLSFLFRYVPVGVLEQPPQKINLRPPYFVGRDDLETLMASGNCADWVRLSEMLLGPAPAN 565
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS++
Sbjct: 566 FNFLPKHKANSYR 578
>gi|311248426|ref|XP_003123132.1| PREDICTED: tRNA-dihydrouridine synthase 3-like isoform 1 [Sus
scrofa]
gi|311248450|ref|XP_003123140.1| PREDICTED: tRNA-dihydrouridine synthase 3-like isoform 1 [Sus
scrofa]
Length = 652
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 520 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 579
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 580 WLSFLCRYVPVGLLERLPQRINERPPYYMGRDYLETLMASQKAADWIRISEMLLGPVPPT 639
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 640 FVFLPKHKANAYK 652
>gi|255543897|ref|XP_002513011.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
gi|223548022|gb|EEF49514.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
Length = 686
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 89/132 (67%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DI S ER DILK+YV++GLEHWGSDT+G+ETTR FLLE
Sbjct: 549 MIARGALIKPWLFTEIKEQRHWDIRSGERLDILKDYVHFGLEHWGSDTKGIETTRHFLLE 608
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y+GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 609 WLSYTCRYIPVGLLDVIPQRINWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPEG 668
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 669 FTFAPKHKSNAY 680
>gi|432950959|ref|XP_004084692.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Oryzias latipes]
Length = 600
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE + +DISS+ER D+L+++ N+GLEHWGSDTRGVE TR FLLE
Sbjct: 468 MIARGALIKPWIFTEIKESRHWDISSSERLDVLRDFTNFGLEHWGSDTRGVEKTRSFLLE 527
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF+ RY+PVGLLE QK+N+RPP Y GRN LETLM S N DW+KISEMLLG +P
Sbjct: 528 WLSFMCRYVPVGLLERVPQKINERPPYYMGRNYLETLMASQNVGDWVKISEMLLGPVPNN 587
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 588 FNFLPKHKANAYK 600
>gi|432102013|gb|ELK29833.1| tRNA-dihydrouridine synthase 3-like protein [Myotis davidii]
Length = 593
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 461 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 520
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 521 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQRAADWIRISEMLLGPVPPN 580
Query: 120 FSFLPKHKANSWK 132
F F+PKHKAN++K
Sbjct: 581 FVFVPKHKANAYK 593
>gi|357467457|ref|XP_003604013.1| tRNA-dihydrouridine synthase 3-like protein [Medicago truncatula]
gi|355493061|gb|AES74264.1| tRNA-dihydrouridine synthase 3-like protein [Medicago truncatula]
Length = 691
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+I RGALIKPWIF EIKE++ +DISS ER +I K++V++GL+HWGSDT+GVETTRRFLLE
Sbjct: 554 LIARGALIKPWIFTEIKEQRHWDISSGERLNIFKDFVHFGLQHWGSDTKGVETTRRFLLE 613
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP YHGR++LETLM S + +DW+++SEMLLGK+P G
Sbjct: 614 WLSYTCRYIPVGLLDVVPQRINWRPPSYHGRDDLETLMASDSAADWVRLSEMLLGKVPDG 673
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 674 FTFAPKHKSNAY 685
>gi|449671032|ref|XP_002163197.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Hydra
magnipapillata]
Length = 557
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DISS ERF++LK + NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 425 MIARGALIKPWIFTEIKEKRHWDISSQERFELLKCFTNYGLEHWGSDTKGVENTRRFLLE 484
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL+RYIPVGLLE QK+N+RPP Y GRN+LETL S DW+KISEMLLG +P
Sbjct: 485 WLSFLYRYIPVGLLEVVPQKINERPPSYFGRNDLETLFASHKSCDWVKISEMLLGPVPDS 544
Query: 120 FSFLPKHKANSW 131
F+FLPKHKAN++
Sbjct: 545 FTFLPKHKANTY 556
>gi|426386785|ref|XP_004059861.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
isoform 2 [Gorilla gorilla gorilla]
Length = 407
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+ + NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 275 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRGFTNYGLEHWGSDTQGVEKTRRFLLE 334
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 335 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQRAADWIRISEMLLGPVPPN 394
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 395 FAFLPKHKANAYK 407
>gi|198471850|ref|XP_001355747.2| GA10329 [Drosophila pseudoobscura pseudoobscura]
gi|198139493|gb|EAL32806.2| GA10329 [Drosophila pseudoobscura pseudoobscura]
Length = 615
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIK++K + +S +RF++L+ Y NYGLEHWGSDT+GVE+TRRFLLE
Sbjct: 484 MIGRGALIKPWIFQEIKQQKAWSPTSTQRFEMLRRYCNYGLEHWGSDTKGVESTRRFLLE 543
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L ++ QK+N+RP Y GR+E+ETLM+S N +DW+K+SEMLLG++P G
Sbjct: 544 WQSFLYRYIPEELQQTPPQKINERPQKYRGRDEMETLMSSGNAADWVKLSEMLLGRVPEG 603
Query: 120 FSFLPKHKANSW 131
FSF+PKHKAN++
Sbjct: 604 FSFVPKHKANAF 615
>gi|334326545|ref|XP_001376181.2| PREDICTED: tRNA-dihydrouridine synthase 3-like [Monodelphis
domestica]
Length = 667
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER DIL+++ NYGLEHWGSDT+GVE TR+FLLE
Sbjct: 535 MIARGALIKPWLFTEIKEQRHWDISSGERLDILRDFTNYGLEHWGSDTQGVEKTRKFLLE 594
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWI ISEMLLG +P
Sbjct: 595 WLSFLCRYIPVGLLEHLPQKINERPPYYLGRDHLETLMASQNVDDWISISEMLLGPVPPA 654
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS++
Sbjct: 655 FTFLPKHKANSYR 667
>gi|357165712|ref|XP_003580470.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Brachypodium
distachyon]
Length = 681
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE+K +DI+S ERF+ILK++ ++GLEHWGSD++GVETTR FLLE
Sbjct: 544 MIARGALIKPWIFTEIKEQKDWDITSGERFNILKDFAHFGLEHWGSDSKGVETTRHFLLE 603
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + +DW++ISEMLLGK+P G
Sbjct: 604 WLSYTCRYIPVGLLDVVPQRLNWRPPSYCGRDDLETLMASDSAADWVRISEMLLGKVPEG 663
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 664 FTFAPKHKSNAY 675
>gi|195384997|ref|XP_002051195.1| GJ13589 [Drosophila virilis]
gi|194147652|gb|EDW63350.1| GJ13589 [Drosophila virilis]
Length = 590
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 89/132 (67%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIK++K + +S +RF++L+ Y NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 459 MIGRGALIKPWIFQEIKQQKAWAPTSTQRFELLRRYCNYGLEHWGSDTKGVENTRRFLLE 518
Query: 61 WLSFLHRYIPVGL-LESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L L QK+N+RP Y GR+E+ETLM+S N +DW+K+SEMLLG +P G
Sbjct: 519 WQSFLYRYIPEELQLSPPQKINERPQKYRGRDEMETLMSSGNSADWVKLSEMLLGPVPEG 578
Query: 120 FSFLPKHKANSW 131
FSF+PKHKAN++
Sbjct: 579 FSFVPKHKANAF 590
>gi|303278554|ref|XP_003058570.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459730|gb|EEH57025.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 430
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 91/132 (68%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DIS+ ER D+LK + YGLEHWGSD RGVE TRRFLLE
Sbjct: 280 MIARGALIKPWIFTEIKERRDWDISATERLDMLKRFAAYGLEHWGSDERGVENTRRFLLE 339
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRYIPVGLLE ++QRPP Y GRNELETL S+ DW+KI+ MLLG PAG
Sbjct: 340 WLSFLHRYIPVGLLEVVPTGIHQRPPSYVGRNELETLFASTQAEDWVKITTMLLGPPPAG 399
Query: 120 FSFLPKHKANSW 131
F+F+PKHK+N++
Sbjct: 400 FNFVPKHKSNAY 411
>gi|195156385|ref|XP_002019081.1| GL26174 [Drosophila persimilis]
gi|194115234|gb|EDW37277.1| GL26174 [Drosophila persimilis]
Length = 577
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIK++K + +S +RF++L+ Y NYGLEHWGSDT+GVE+TRRFLLE
Sbjct: 446 MIGRGALIKPWIFQEIKQQKAWSPTSTQRFEMLRRYCNYGLEHWGSDTKGVESTRRFLLE 505
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L ++ QK+N+RP Y GR+E+ETLM+S N +DW+K+SEMLLG++P G
Sbjct: 506 WQSFLYRYIPEELQQTPPQKINERPQKYRGRDEMETLMSSGNAADWVKLSEMLLGRVPEG 565
Query: 120 FSFLPKHKANSW 131
FSF+PKHKAN++
Sbjct: 566 FSFVPKHKANAF 577
>gi|359475077|ref|XP_002275411.2| PREDICTED: tRNA-dihydrouridine synthase 3-like [Vitis vinifera]
gi|297744713|emb|CBI37975.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF EIKE++ +DISS ER +ILK+YV GLEHWGSDT+GVETTR F+LE
Sbjct: 541 MIARGALVKPWIFTEIKEQRHWDISSGERLNILKDYVRCGLEHWGSDTKGVETTRHFMLE 600
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ +RY+PVGLL+ Q++N RPP Y GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 601 WLSYTYRYVPVGLLDVIPQQLNWRPPSYFGRDDLETLMASDSAADWIRISEMLLGKVPPG 660
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 661 FTFAPKHKSNAY 672
>gi|195053116|ref|XP_001993476.1| GH13829 [Drosophila grimshawi]
gi|193900535|gb|EDV99401.1| GH13829 [Drosophila grimshawi]
Length = 582
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 89/132 (67%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIK+++ + +S +RF++++ Y NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 451 MIGRGALIKPWIFQEIKQQRAWAPTSTQRFELMRRYCNYGLEHWGSDTKGVENTRRFLLE 510
Query: 61 WLSFLHRYIPVGL-LESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L L QK+N+RP Y GR+E+ETLM+S N SDW+K+SEMLLGK+P G
Sbjct: 511 WQSFLYRYIPEELQLSPPQKINERPQKYRGRDEMETLMSSGNASDWVKLSEMLLGKVPEG 570
Query: 120 FSFLPKHKANSW 131
FSF+PKHKAN++
Sbjct: 571 FSFVPKHKANAF 582
>gi|116308867|emb|CAH66003.1| H0613H07.1 [Oryza sativa Indica Group]
Length = 685
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF E+KE++ +DI+S ERF+ILK++V +GLEHWGSD++GVETTR FLLE
Sbjct: 548 MIARGALIKPWIFTEVKEQRHWDITSGERFNILKDFVTFGLEHWGSDSKGVETTRYFLLE 607
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 608 WLSYTCRYIPVGLLDVIPQRLNWRPPSYCGRDDLETLMISDSAADWIRISEMLLGKVPEG 667
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 668 FTFTPKHKSNAY 679
>gi|125547021|gb|EAY92843.1| hypothetical protein OsI_14644 [Oryza sativa Indica Group]
Length = 685
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF E+KE++ +DI+S ERF+ILK++V++GLEHWGSD++GVETTR FLLE
Sbjct: 548 MIARGALIKPWIFTEVKEQRHWDITSGERFNILKDFVSFGLEHWGSDSKGVETTRYFLLE 607
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 608 WLSYTCRYIPVGLLDVIPQRLNWRPPSYCGRDDLETLMISDSSADWIRISEMLLGKVPEG 667
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 668 FTFTPKHKSNAY 679
>gi|125589164|gb|EAZ29514.1| hypothetical protein OsJ_13588 [Oryza sativa Japonica Group]
Length = 685
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF E+KE++ +DI+S ERF+ILK++V++GLEHWGSD++GVETTR FLLE
Sbjct: 548 MIARGALIKPWIFTEVKEQRHWDITSGERFNILKDFVSFGLEHWGSDSKGVETTRYFLLE 607
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 608 WLSYTCRYIPVGLLDVIPQRLNWRPPSYCGRDDLETLMISDSAADWIRISEMLLGKVPEG 667
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 668 FTFTPKHKSNAY 679
>gi|115456906|ref|NP_001052053.1| Os04g0117600 [Oryza sativa Japonica Group]
gi|75233055|sp|Q7XT07.2|DUS3L_ORYSJ RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=Zinc finger CCCH domain-containing protein
26; Short=OsC3H26; AltName: Full=tRNA-dihydrouridine
synthase 3-like
gi|38344118|emb|CAE01725.2| OSJNBb0050O03.15 [Oryza sativa Japonica Group]
gi|113563624|dbj|BAF13967.1| Os04g0117600 [Oryza sativa Japonica Group]
Length = 685
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF E+KE++ +DI+S ERF+ILK++V++GLEHWGSD++GVETTR FLLE
Sbjct: 548 MIARGALIKPWIFTEVKEQRHWDITSGERFNILKDFVSFGLEHWGSDSKGVETTRYFLLE 607
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 608 WLSYTCRYIPVGLLDVIPQRLNWRPPSYCGRDDLETLMISDSAADWIRISEMLLGKVPEG 667
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 668 FTFTPKHKSNAY 679
>gi|47219443|emb|CAG10807.1| unnamed protein product [Tetraodon nigroviridis]
Length = 614
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DISS ER DIL+++ N+GLEHWGSDTRGVE TR F+LE
Sbjct: 482 MIARGALIKPWIFTEIKEKRHWDISSGERLDILRDFTNFGLEHWGSDTRGVEKTRSFMLE 541
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF+ RYIPVGLLE QK+N+RPP Y GR+ LE+LM S N DW++ISEMLLG +P
Sbjct: 542 WLSFMCRYIPVGLLERVPQKINERPPYYLGRDYLESLMASQNVGDWVRISEMLLGPVPKN 601
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 602 FNFLPKHKANAYK 614
>gi|338726580|ref|XP_001916859.2| PREDICTED: tRNA-dihydrouridine synthase 3 isoform 1 [Equus
caballus]
Length = 657
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 88/133 (66%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DIS++ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 525 MIARGALLKPWLFTEIKEQRHWDISASERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 584
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP + GR+ LETL+ S +DWI+ISEMLLG +P
Sbjct: 585 WLSFLCRYVPVGLLERLPQRLNERPPYFLGRDYLETLLASQRAADWIRISEMLLGPVPRD 644
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 645 FVFLPKHKANAYK 657
>gi|359322128|ref|XP_003639789.1| PREDICTED: tRNA-dihydrouridine synthase 3-like isoform 1 [Canis
lupus familiaris]
Length = 645
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER IL+++ YGLEHWGSDT+GVE TRRFLLE
Sbjct: 513 MIARGALLKPWLFTEIKEQRHWDISSSERLAILQDFTRYGLEHWGSDTQGVEKTRRFLLE 572
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 573 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 632
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 633 FVFLPKHKANAYK 645
>gi|242072234|ref|XP_002446053.1| hypothetical protein SORBIDRAFT_06g001050 [Sorghum bicolor]
gi|241937236|gb|EES10381.1| hypothetical protein SORBIDRAFT_06g001050 [Sorghum bicolor]
Length = 679
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DI+S ER +ILK++V +GLEHWGSD++GVETTR FLLE
Sbjct: 542 MIARGALIKPWLFTEIKEQRHWDITSGERLNILKDFVRFGLEHWGSDSKGVETTRHFLLE 601
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y+GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 602 WLSYTCRYIPVGLLDVIPQRLNWRPPSYYGRDDLETLMVSDSAADWIRISEMLLGKVPEG 661
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 662 FTFAPKHKSNAY 673
>gi|355685044|gb|AER97601.1| dihydrouridine synthase 3-like protein [Mustela putorius furo]
Length = 647
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 89/132 (67%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER IL+++ YGLEHWGSDT+GVE TRRFLLE
Sbjct: 516 MIARGALLKPWLFTEIKEQRHWDISSSERLTILQDFTRYGLEHWGSDTQGVEKTRRFLLE 575
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 576 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 635
Query: 120 FSFLPKHKANSW 131
F FLPKHKAN++
Sbjct: 636 FVFLPKHKANAY 647
>gi|321468855|gb|EFX79838.1| hypothetical protein DAPPUDRAFT_304378 [Daphnia pulex]
Length = 663
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS+ERF +K++ NYGLEHWGSD++GVE TRRFLLE
Sbjct: 531 MIARGALIKPWIFTEIKERRHWDISSSERFQYMKDFCNYGLEHWGSDSQGVERTRRFLLE 590
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SF HRY+PVGLLE QKMN RPP + GR++LETL+ S N DW++I EM LG P G
Sbjct: 591 WQSFAHRYVPVGLLERPPQKMNLRPPPFRGRDDLETLLGSPNAGDWVRICEMFLGPAPDG 650
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANSWK
Sbjct: 651 FQFLPKHKANSWK 663
>gi|226492326|ref|NP_001145737.1| uncharacterized protein LOC100279244 [Zea mays]
gi|219884231|gb|ACL52490.1| unknown [Zea mays]
gi|224031411|gb|ACN34781.1| unknown [Zea mays]
gi|413917958|gb|AFW57890.1| hypothetical protein ZEAMMB73_676116 [Zea mays]
Length = 686
Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DI+S ER +ILK++V +GLEHWGSD +GVETTR FLLE
Sbjct: 549 MIARGALIKPWLFTEIKEQRHWDITSGERLNILKDFVRFGLEHWGSDFKGVETTRHFLLE 608
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y+GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 609 WLSYTCRYIPVGLLDVIPQRLNWRPPSYYGRDDLETLMVSDSAADWIRISEMLLGKVPEG 668
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 669 FTFAPKHKSNAY 680
>gi|119589547|gb|EAW69141.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119589548|gb|EAW69142.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_a [Homo
sapiens]
Length = 315
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 183 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 242
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 243 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 302
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 303 FAFLPKHKANAYK 315
>gi|241649968|ref|XP_002411233.1| tRNA-dihydrouridine synthase, putative [Ixodes scapularis]
gi|215503863|gb|EEC13357.1| tRNA-dihydrouridine synthase, putative [Ixodes scapularis]
Length = 326
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 110/129 (85%), Gaps = 1/129 (0%)
Query: 4 RGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLS 63
RGALIKPWIF EIKE++ +DISS+ER +ILK+Y YGL+HWGSDT GVE TRRFLLEWLS
Sbjct: 196 RGALIKPWIFMEIKEQRHWDISSSERLEILKKYTGYGLDHWGSDTEGVERTRRFLLEWLS 255
Query: 64 FLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSF 122
FLHRYIPVGLLE QK+N+RPP Y GR++LETL S +C+DW++ISEMLLG P FSF
Sbjct: 256 FLHRYIPVGLLEVLPQKINERPPPYRGRDDLETLFASPSCADWVRISEMLLGPTPEDFSF 315
Query: 123 LPKHKANSW 131
LPKHKAN++
Sbjct: 316 LPKHKANAY 324
>gi|24585320|ref|NP_610000.1| CG10463 [Drosophila melanogaster]
gi|7298625|gb|AAF53841.1| CG10463 [Drosophila melanogaster]
Length = 604
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK+ + SS +R+++L+++ NYGLEHWGSDT+GVETTRRFLLE
Sbjct: 473 MIGRGALIKPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHWGSDTKGVETTRRFLLE 532
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L + QK+N RP Y GR+E+ETLM+S N +DW+K+SE LLG++P G
Sbjct: 533 WQSFLYRYIPEALQTAPPQKINARPQKYRGRDEMETLMSSGNAADWVKLSESLLGRVPEG 592
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 593 FTFVPKHKANAF 604
>gi|302773960|ref|XP_002970397.1| hypothetical protein SELMODRAFT_267436 [Selaginella moellendorffii]
gi|300161913|gb|EFJ28527.1| hypothetical protein SELMODRAFT_267436 [Selaginella moellendorffii]
Length = 634
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 110/132 (83%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ EIKE++ +DISS ER D+L++Y +GLEHWGSD++GVETTR+FLLE
Sbjct: 497 MLARGALIKPWLLTEIKEQRHWDISSNERLDLLRDYTQFGLEHWGSDSKGVETTRKFLLE 556
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+LHRYIPVGLLE Q++N RPP Y GRN+LETLM S + +DW++ISEMLLG P G
Sbjct: 557 WLSYLHRYIPVGLLEVIPQRLNWRPPRYVGRNDLETLMASDSAADWVRISEMLLGPAPEG 616
Query: 120 FSFLPKHKANSW 131
F F PKHK++++
Sbjct: 617 FVFTPKHKSSAY 628
>gi|380795903|gb|AFE69827.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform 1,
partial [Macaca mulatta]
Length = 391
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 259 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 318
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 319 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 378
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 379 FVFLPKHKANAYK 391
>gi|119589551|gb|EAW69145.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_d [Homo
sapiens]
Length = 239
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 107 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 166
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 167 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 226
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 227 FAFLPKHKANAYK 239
>gi|320168070|gb|EFW44969.1| tRNA-dihydrouridine synthase 3 [Capsaspora owczarzaki ATCC 30864]
Length = 741
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 110/132 (83%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE + +DISS ERFD+LK++VNYGLEHWGSDTRGVETTRRFLLE
Sbjct: 608 MLARGALIKPWVFTEIKESRTWDISSGERFDMLKKFVNYGLEHWGSDTRGVETTRRFLLE 667
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL RY+P L+E Q++++RP ++GRN+LETLM S N +DW+K+SEMLLG +P
Sbjct: 668 WQSFLCRYVPAELVEVLPQRIHERPQPFYGRNDLETLMASRNAADWLKLSEMLLGPVPGD 727
Query: 120 FSFLPKHKANSW 131
F+F PKH ANS+
Sbjct: 728 FNFQPKHIANSY 739
>gi|67587982|ref|XP_665290.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655895|gb|EAL35060.1| hypothetical protein Chro.50134 [Cryptosporidium hominis]
Length = 677
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 111/133 (83%), Gaps = 3/133 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF EIKE + +DIS++ERFDI+K+YVN GLEHWG+D RG+ TRRFLLE
Sbjct: 543 MIGRGALLKPWIFTEIKENRNWDISASERFDIIKQYVNLGLEHWGTDKRGIALTRRFLLE 602
Query: 61 WLSFLHRYIPVGLLES---TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
+LSF HRYIP+G+LE TQ N R P Y GRN+LET++ SSN SDWIKISEM+LGK+P
Sbjct: 603 FLSFFHRYIPIGILEQPIHTQNFNWRTPKYIGRNDLETMLASSNSSDWIKISEMILGKVP 662
Query: 118 AGFSFLPKHKANS 130
+ F F+PKHKANS
Sbjct: 663 SDFVFIPKHKANS 675
>gi|391336316|ref|XP_003742527.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]
[Metaseiulus occidentalis]
Length = 562
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
++ RGALIKPW+F EIKE++ +DISS ER DILK++ NYGL+HWGSDT GVE TRRFLLE
Sbjct: 430 LLARGALIKPWLFTEIKERRHWDISSNERLDILKKFSNYGLDHWGSDTEGVERTRRFLLE 489
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL+RYIPVGLLE Q++N RPP+Y GR++LETLM S +C DWI+ISEMLLG +
Sbjct: 490 WLSFLYRYIPVGLLERLPQRINDRPPLYRGRDDLETLMASPSCRDWIRISEMLLGPVRDD 549
Query: 120 FSFLPKHKANSW 131
F FLPKHKAN++
Sbjct: 550 FDFLPKHKANAY 561
>gi|66358006|ref|XP_626181.1| Ylr401cp-like protein with 2 CCCH domains plus Dus1p tRNA
dihydrouridine synthase Tim barrel [Cryptosporidium
parvum Iowa II]
gi|46227017|gb|EAK87967.1| Ylr401cp-like protein with 2 CCCH domains plus Dus1p tRNA
dihydrouridine synthase Tim barrel [Cryptosporidium
parvum Iowa II]
Length = 707
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 111/133 (83%), Gaps = 3/133 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF EIKE + +DIS++ERFDI+K+YVN GLEHWG+D RG+ TRRFLLE
Sbjct: 573 MIGRGALLKPWIFTEIKENRNWDISASERFDIIKQYVNLGLEHWGTDKRGIALTRRFLLE 632
Query: 61 WLSFLHRYIPVGLLES---TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
+LSF HRYIP+G+LE TQ N R P Y GRN+LET++ SSN SDWIKISEM+LGK+P
Sbjct: 633 FLSFFHRYIPIGILEQPIHTQNFNWRTPKYIGRNDLETMLASSNSSDWIKISEMILGKVP 692
Query: 118 AGFSFLPKHKANS 130
+ F F+PKHKANS
Sbjct: 693 SDFVFIPKHKANS 705
>gi|148706255|gb|EDL38202.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_b [Mus
musculus]
Length = 351
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 219 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 278
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 279 WLSFLCRYVPVGLLERPPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 338
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 339 FVFLPKHKANAYK 351
>gi|195345193|ref|XP_002039157.1| GM17377 [Drosophila sechellia]
gi|194134287|gb|EDW55803.1| GM17377 [Drosophila sechellia]
Length = 605
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK+ + SS +R+++L+++ NYGLEHWGSDT+GVETTRRFLLE
Sbjct: 474 MIGRGALIKPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHWGSDTKGVETTRRFLLE 533
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L + QK+N RP Y GR+E+ETLM+S N +DW+K+SE LLG++P G
Sbjct: 534 WQSFLYRYIPEALQTAPPQKINARPQKYRGRDEMETLMSSGNAADWVKLSESLLGRVPEG 593
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 594 FTFVPKHKANAF 605
>gi|133778319|gb|AAH23942.1| Dus3l protein [Mus musculus]
Length = 274
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 142 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 201
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 202 WLSFLCRYVPVGLLERPPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 261
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 262 FVFLPKHKANAYK 274
>gi|384483225|gb|EIE75405.1| hypothetical protein RO3G_00109 [Rhizopus delemar RA 99-880]
Length = 585
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 88/133 (66%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIK ++ +DIS+ ERFD+LK + +YGLEHWGSD++GV TRRFL E
Sbjct: 449 MIGRGALIKPWIFDEIKNQRDYDISANERFDMLKRFCDYGLEHWGSDSQGVNITRRFLCE 508
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIPVG+LE Q+MN+RPP + GRN+LETLM S SDW+K+SE++LG P
Sbjct: 509 WQSFLYRYIPVGILEKPPQRMNERPPPFQGRNDLETLMASPLASDWVKLSELILGPAPED 568
Query: 120 FSFLPKHKANSWK 132
F FLPKHKANS++
Sbjct: 569 FKFLPKHKANSFE 581
>gi|149028167|gb|EDL83605.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_b
[Rattus norvegicus]
Length = 304
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 172 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 231
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 232 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 291
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 292 FVFLPKHKANAYK 304
>gi|410911856|ref|XP_003969406.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Takifugu rubripes]
Length = 622
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS ER DIL+++ N+GLEHWGSDTRGVE TR F+LE
Sbjct: 490 MIARGALIKPWIFTEIKERRHWDISSNERLDILRDFANFGLEHWGSDTRGVEKTRSFMLE 549
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF+ RYIPVGLLE Q++N+RPP Y GR+ LE+LM S + DW++ISEMLLG +P
Sbjct: 550 WLSFMCRYIPVGLLERVPQRINERPPYYSGRDYLESLMASQHVGDWVRISEMLLGPVPKN 609
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 610 FNFLPKHKANAYK 622
>gi|302769496|ref|XP_002968167.1| hypothetical protein SELMODRAFT_89139 [Selaginella moellendorffii]
gi|300163811|gb|EFJ30421.1| hypothetical protein SELMODRAFT_89139 [Selaginella moellendorffii]
Length = 540
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 110/132 (83%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ EIKE++ +DISS ER D+L++Y +GLEHWGSD++GVETTR+FLLE
Sbjct: 403 MLARGALIKPWLLTEIKEQRHWDISSNERLDLLRDYTQFGLEHWGSDSKGVETTRKFLLE 462
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+LHRYIPVGLLE Q++N RPP Y GRN+LETLM S + +DW++ISEMLLG P G
Sbjct: 463 WLSYLHRYIPVGLLEVIPQRLNWRPPRYVGRNDLETLMASDSAADWVRISEMLLGPAPEG 522
Query: 120 FSFLPKHKANSW 131
F F PKHK++++
Sbjct: 523 FVFTPKHKSSAY 534
>gi|359322130|ref|XP_003639790.1| PREDICTED: tRNA-dihydrouridine synthase 3-like isoform 2 [Canis
lupus familiaris]
Length = 408
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER IL+++ YGLEHWGSDT+GVE TRRFLLE
Sbjct: 276 MIARGALLKPWLFTEIKEQRHWDISSSERLAILQDFTRYGLEHWGSDTQGVEKTRRFLLE 335
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 336 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 395
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 396 FVFLPKHKANAYK 408
>gi|195580263|ref|XP_002079972.1| GD24232 [Drosophila simulans]
gi|194191981|gb|EDX05557.1| GD24232 [Drosophila simulans]
Length = 605
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK+ + SS +R+++L+++ NYG+EHWGSDT+GVETTRRFLLE
Sbjct: 474 MIGRGALIKPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGMEHWGSDTKGVETTRRFLLE 533
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L + QK+N RP Y GR+E+ETLM+S N +DW+K+SE LLG++P G
Sbjct: 534 WQSFLYRYIPEALQTAPPQKINARPQKYRGRDEMETLMSSGNAADWVKLSESLLGRVPEG 593
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 594 FTFVPKHKANAF 605
>gi|41056139|ref|NP_956968.1| tRNA-dihydrouridine synthase 3-like [Danio rerio]
gi|34784014|gb|AAH58066.1| Zgc:63779 [Danio rerio]
Length = 660
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE + +DISS ER DIL+++ ++GLEHWGSDT+GVE TR FLLE
Sbjct: 528 MVARGALIKPWLFTEIKESRHWDISSTERLDILRDFTHFGLEHWGSDTQGVEKTRNFLLE 587
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE Q++N+RPP Y GR+ LETLM S + DWI+ISEMLLG +P
Sbjct: 588 WLSFLCRYIPVGLLERVPQRINERPPFYMGRDYLETLMASQHVDDWIQISEMLLGPVPKN 647
Query: 120 FSFLPKHKANSWK 132
FSFLPKHKAN++K
Sbjct: 648 FSFLPKHKANAYK 660
>gi|349805061|gb|AEQ18003.1| putative dihydrouridine synthase 3 protein [Hymenochirus curtipes]
Length = 142
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/132 (71%), Positives = 113/132 (85%), Gaps = 2/132 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISSAERFDILK++ NYGLEHWGSD++GVE TRRFLLE
Sbjct: 12 MLARGALVKPWLFTEIKEQRHWDISSAERFDILKDFTNYGLEHWGSDSQGVEKTRRFLLE 71
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL YIPVGLLE QK+N+RPP Y GR+ LETLM S N +DWIK+SEMLLG +P
Sbjct: 72 WLSFLC-YIPVGLLEHVPQKINERPPYYMGRDYLETLMASQNVTDWIKMSEMLLGPVPPN 130
Query: 120 FSFLPKHKANSW 131
F+FLPKHKANS+
Sbjct: 131 FTFLPKHKANSY 142
>gi|449284186|gb|EMC90733.1| tRNA-dihydrouridine synthase 3-like protein, partial [Columba
livia]
Length = 598
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 113/137 (82%), Gaps = 5/137 (3%)
Query: 1 MIGR----GALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MI R GALIKPW+F EIKE++ +DISS+ERF ILK++ +YGLEHWGSDT+GVE TR+
Sbjct: 462 MIARQVLVGALIKPWLFTEIKEQRHWDISSSERFGILKDFTSYGLEHWGSDTQGVEKTRK 521
Query: 57 FLLEWLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGK 115
FLLEWLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWIKISEMLLG
Sbjct: 522 FLLEWLSFLCRYIPVGLLEHLPQKINERPPYYMGRDYLETLMASQNVDDWIKISEMLLGP 581
Query: 116 IPAGFSFLPKHKANSWK 132
+P F+FLPKHKANS++
Sbjct: 582 VPTSFTFLPKHKANSYR 598
>gi|338726582|ref|XP_003365354.1| PREDICTED: tRNA-dihydrouridine synthase 3 isoform 2 [Equus
caballus]
Length = 408
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 88/133 (66%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DIS++ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 276 MIARGALLKPWLFTEIKEQRHWDISASERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 335
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP + GR+ LETL+ S +DWI+ISEMLLG +P
Sbjct: 336 WLSFLCRYVPVGLLERLPQRLNERPPYFLGRDYLETLLASQRAADWIRISEMLLGPVPRD 395
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 396 FVFLPKHKANAYK 408
>gi|194879304|ref|XP_001974213.1| GG21206 [Drosophila erecta]
gi|190657400|gb|EDV54613.1| GG21206 [Drosophila erecta]
Length = 609
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK+ + SS +R+++L+++ NYGLEHWGSDT+GVETTRRFLLE
Sbjct: 478 MIGRGALIKPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHWGSDTKGVETTRRFLLE 537
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L + QK+N RP Y GR+E+ETLM+S N +DW+K+SE LLG++P
Sbjct: 538 WQSFLYRYIPEALQTAPPQKINARPQKYRGRDEMETLMSSGNAADWVKLSESLLGRVPES 597
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 598 FTFVPKHKANAF 609
>gi|149028169|gb|EDL83607.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_d
[Rattus norvegicus]
Length = 159
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 27 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 86
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 87 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 146
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 147 FVFLPKHKANAYK 159
>gi|335282431|ref|XP_003354063.1| PREDICTED: tRNA-dihydrouridine synthase 3-like isoform 2 [Sus
scrofa]
gi|335282439|ref|XP_003354066.1| PREDICTED: tRNA-dihydrouridine synthase 3-like isoform 2 [Sus
scrofa]
Length = 411
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 279 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 338
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 339 WLSFLCRYVPVGLLERLPQRINERPPYYMGRDYLETLMASQKAADWIRISEMLLGPVPPT 398
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 399 FVFLPKHKANAYK 411
>gi|195118882|ref|XP_002003961.1| GI20204 [Drosophila mojavensis]
gi|193914536|gb|EDW13403.1| GI20204 [Drosophila mojavensis]
Length = 614
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/132 (68%), Positives = 110/132 (83%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKE+K SS +RF++++ Y NYGLEHWGSDT+GVE+TRRFLLE
Sbjct: 483 MIGRGALIKPWIFQEIKEQKACSPSSTQRFEMMRRYCNYGLEHWGSDTKGVESTRRFLLE 542
Query: 61 WLSFLHRYIPVGL-LESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L L QK+N RP Y GR+E+ETLM+S N SDW+++SEMLLG +P G
Sbjct: 543 WQSFLYRYIPEELQLSPPQKINARPQKYRGRDEMETLMSSGNASDWVRLSEMLLGPVPHG 602
Query: 120 FSFLPKHKANSW 131
FSF+PKHKAN++
Sbjct: 603 FSFVPKHKANAF 614
>gi|344237632|gb|EGV93735.1| tRNA-dihydrouridine synthase 3-like [Cricetulus griseus]
Length = 670
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 92/157 (58%), Positives = 114/157 (72%), Gaps = 25/157 (15%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 514 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 573
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI----------- 108
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+I
Sbjct: 574 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDHLETLMASQQAADWIRIRYPLAWVLWGD 633
Query: 109 -------------SEMLLGKIPAGFSFLPKHKANSWK 132
SEMLLG +P GF+FLPKHKAN++K
Sbjct: 634 AGRPRPDLSPCPHSEMLLGPVPPGFAFLPKHKANAYK 670
>gi|402903870|ref|XP_003914778.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Papio
anubis]
Length = 133
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 1 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 60
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 61 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPN 120
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 121 FVFLPKHKANAYK 133
>gi|149028166|gb|EDL83604.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_a
[Rattus norvegicus]
Length = 174
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 42 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 101
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 102 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 161
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 162 FVFLPKHKANAYK 174
>gi|289742295|gb|ADD19895.1| uncharacterized conserved protein [Glossina morsitans morsitans]
Length = 582
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIK++K + +S+ERF++L++YVNYGLEHWGSDT+GVE TRRFLLE
Sbjct: 451 MIGRGALIKPWIFQEIKQQKHWSPTSSERFELLRKYVNYGLEHWGSDTKGVENTRRFLLE 510
Query: 61 WLSFLHRYIPVG-LLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP LL+ QK+N+RP + GR+E+ETLM+S N DW+K+SEMLLG +P G
Sbjct: 511 WQSFLYRYIPYELLLKPPQKINERPQQFRGRDEMETLMSSPNAQDWVKLSEMLLGPVPEG 570
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 571 FTFVPKHKANAY 582
>gi|109126451|ref|XP_001113869.1| PREDICTED: tRNA-dihydrouridine synthase 3-like, partial [Macaca
mulatta]
Length = 246
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 114 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 173
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+IS+MLLG +P
Sbjct: 174 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISKMLLGPVPPN 233
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 234 FVFLPKHKANAYK 246
>gi|170579239|ref|XP_001894741.1| dihydrouridine synthase domain containing protein [Brugia malayi]
gi|158598545|gb|EDP36417.1| dihydrouridine synthase domain containing protein [Brugia malayi]
Length = 832
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF EIKE + +DI+++ER D ++ +VNYGLEHWGSD GVE TRRFLLE
Sbjct: 683 MIGRGALMKPWIFTEIKECRHWDITASERLDYIQRFVNYGLEHWGSDDEGVEKTRRFLLE 742
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RYIPVGLLE Q+MN+RPP YHGR++LETL+ S DWIKISEM LGK+P
Sbjct: 743 WLSFAYRYIPVGLLEVVPQRMNERPPFYHGRSDLETLLASDQSRDWIKISEMFLGKVPEN 802
Query: 120 FSFLPKHKANSW 131
F F+PKH AN++
Sbjct: 803 FLFIPKHNANAY 814
>gi|449461637|ref|XP_004148548.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Cucumis sativus]
gi|449519930|ref|XP_004166987.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Cucumis sativus]
Length = 698
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DI+S ER +ILK++ ++GLEHWGSD++GVETTR FLLE
Sbjct: 561 MIARGALIKPWLFTEIKEQRNWDITSGERLNILKDFAHFGLEHWGSDSKGVETTRHFLLE 620
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLLE Q++N RPP Y GR++LETLM+S + +DWIKISEMLLGK+P G
Sbjct: 621 WLSYTCRYIPVGLLEVVPQRLNWRPPSYFGRDDLETLMSSDSAADWIKISEMLLGKVPDG 680
Query: 120 FSFLPKHKANSW 131
FSF PKHK+N++
Sbjct: 681 FSFAPKHKSNAY 692
>gi|410950229|ref|XP_003981813.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Felis
catus]
Length = 609
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 88/129 (68%), Positives = 107/129 (82%), Gaps = 1/129 (0%)
Query: 5 GALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLSF 64
GAL+KPW+F EIKE++ +DISS+ER IL+++ YGLEHWGSDT+GVE TRRFLLEWLSF
Sbjct: 481 GALLKPWLFTEIKEQRHWDISSSERLAILQDFTRYGLEHWGSDTQGVEKTRRFLLEWLSF 540
Query: 65 LHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSFL 123
L RY+PVGLLE Q++N+RPP Y GRN LETLM S +DWI+ISEMLLG +P F FL
Sbjct: 541 LCRYVPVGLLERLPQRINERPPYYLGRNYLETLMASQKAADWIRISEMLLGPVPPNFVFL 600
Query: 124 PKHKANSWK 132
PKHKAN++K
Sbjct: 601 PKHKANAYK 609
>gi|213514710|ref|NP_001133911.1| tRNA-dihydrouridine synthase 3-like [Salmo salar]
gi|209155790|gb|ACI34127.1| tRNA-dihydrouridine synthase 3-like [Salmo salar]
Length = 654
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE++ +DISS+ER D+L+++ +YGLEHWGSDT+G+E TR FLLE
Sbjct: 522 MLARGALIKPWVFTEIKERRDWDISSSERLDVLRDFTHYGLEHWGSDTQGLEKTRNFLLE 581
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF+ RYIPVGLLE QK+N+RPP Y GR+ LE+LM S + DWIKISEMLLG +P
Sbjct: 582 WLSFMCRYIPVGLLERVPQKINERPPYYMGRDYLESLMASQHVGDWIKISEMLLGPVPKN 641
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 642 FNFLPKHKANAYK 654
>gi|195433972|ref|XP_002064980.1| GK14924 [Drosophila willistoni]
gi|194161065|gb|EDW75966.1| GK14924 [Drosophila willistoni]
Length = 579
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK+ + SS++R+++L++Y NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 448 MIGRGALIKPWIFQEIKEKRAWSPSSSQRYELLQKYCNYGLEHWGSDTKGVENTRRFLLE 507
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP + ++ QK+N RP Y GR+E+ETLM+S N SDW+K+SEMLLG +P G
Sbjct: 508 WQSFLYRYIPEEVQQAPPQKINSRPQAYRGRDEMETLMSSGNSSDWVKLSEMLLGPVPQG 567
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 568 FTFVPKHKANAF 579
>gi|313234425|emb|CBY24624.1| unnamed protein product [Oikopleura dioica]
Length = 636
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EIKE+K+ D SS+ER D+LK++V YGLEHWG+D +G+ TRRFLLE
Sbjct: 503 MIGRGALIKPWVFEEIKEQKVMDPSSSERMDMLKKFVRYGLEHWGTDQQGLANTRRFLLE 562
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+P G++E Q++N RPP R+ELETL TSS+C+DWIKI+EMLLG +P
Sbjct: 563 WLSFLCRYVPTGIIEGQPQQINHRPPPLVCRDELETLFTSSDCNDWIKITEMLLGPVPES 622
Query: 120 FSFLPKHKANSWK 132
F F+PKHKANS+K
Sbjct: 623 FRFVPKHKANSYK 635
>gi|21430920|gb|AAM51138.1| SD26982p [Drosophila melanogaster]
Length = 604
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK+ + SS +R+++L+++ NYGLEHWGSDT+GVETTRRFLLE
Sbjct: 473 MIGRGALIKPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHWGSDTKGVETTRRFLLE 532
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L + QK+N RP Y GR+E+ETLM+S N +DW+K+SE LLG++P G
Sbjct: 533 WQSFLYRYIPEALQTAPPQKINARPQKYRGRDEMETLMSSGNAADWVKLSESLLGRVPEG 592
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 593 FTFVPKHKANAF 604
>gi|326435888|gb|EGD81458.1| DUS3L protein [Salpingoeca sp. ATCC 50818]
Length = 612
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE++ +DISS+ERF LK++ +YGL HWGSD +GVETTRRFLLE
Sbjct: 475 MLARGALIKPWLFTEIKEQRHWDISSSERFQFLKDFADYGLTHWGSDQQGVETTRRFLLE 534
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RYIPVGLLE Q++N+RPP +HGR++LETL+ S + +DW+KISEMLLG P+
Sbjct: 535 WLSFTYRYIPVGLLERLPQRINERPPRFHGRDDLETLLASPHSTDWVKISEMLLGPPPSS 594
Query: 120 FSFLPKHKANSW 131
F F+PKHKANS+
Sbjct: 595 FEFVPKHKANSY 606
>gi|194760465|ref|XP_001962460.1| GF14432 [Drosophila ananassae]
gi|190616157|gb|EDV31681.1| GF14432 [Drosophila ananassae]
Length = 606
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKE+K + SS++RF++++++ NYGLEHWGSDT+GVETTRRFLLE
Sbjct: 475 MIGRGALIKPWIFQEIKEQKAWAPSSSQRFELMRKFCNYGLEHWGSDTKGVETTRRFLLE 534
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L ++ QK+N RP Y GR+E+ETLM+S N SDW+K+SE LLG +P G
Sbjct: 535 WQSFLYRYIPEELQQAPPQKINARPQKYRGRDEMETLMSSGNASDWVKLSESLLGPVPEG 594
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 595 FTFVPKHKANAF 606
>gi|294892129|ref|XP_002773909.1| tRNA-dihydrouridine synthase, putative [Perkinsus marinus ATCC
50983]
gi|239879113|gb|EER05725.1| tRNA-dihydrouridine synthase, putative [Perkinsus marinus ATCC
50983]
Length = 606
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 88/133 (66%), Positives = 110/133 (82%), Gaps = 2/133 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE + +DISSAER ++LK +V+YGL HWG+DTRGVE+TRRFLLE
Sbjct: 460 MIGRGALIKPWIFTEIKEHRDWDISSAERLELLKRFVSYGLTHWGTDTRGVESTRRFLLE 519
Query: 61 WLSFLHRYIPVGLLE--STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
LSFL+RYIP+GL++ + K+ RPP Y GRN+LETLM SSN DWI++SE+L+ P
Sbjct: 520 ALSFLYRYIPLGLMQGMTPMKIGWRPPRYMGRNDLETLMASSNSEDWIRLSELLICPAPQ 579
Query: 119 GFSFLPKHKANSW 131
GF F+PKHK+NS+
Sbjct: 580 GFKFVPKHKSNSY 592
>gi|397615409|gb|EJK63417.1| hypothetical protein THAOC_15927 [Thalassiosira oceanica]
Length = 137
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 2/133 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+ EIKE++ +DIS++ER D+LKE+V YGLEHWG+D +G+ TRRFLLE
Sbjct: 1 MLGRGALIKPWLPTEIKERRHWDISASERLDMLKEFVRYGLEHWGTDQKGINNTRRFLLE 60
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMY-HGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
WLSFLHRY+PVG+LE QKMNQRPP + GR++LET+M S NC+DWIK+SEMLLGK P
Sbjct: 61 WLSFLHRYVPVGMLEVLPQKMNQRPPEHLCGRSDLETIMLSGNCADWIKLSEMLLGKCPD 120
Query: 119 GFSFLPKHKANSW 131
GF F PKHKANS+
Sbjct: 121 GFKFEPKHKANSF 133
>gi|402586955|gb|EJW80891.1| dihydrouridine synthase domain-containing protein [Wuchereria
bancrofti]
Length = 461
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF EIKE + +DI++++R D ++ +VNYGLEHWGSD GVE TRRFLLE
Sbjct: 316 MIGRGALMKPWIFTEIKECRHWDIAASQRLDYIQRFVNYGLEHWGSDDEGVEKTRRFLLE 375
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RYIPVGLLE Q+MN+RPP YHGR++LETL+ S DWIKISEM LGK+P
Sbjct: 376 WLSFACRYIPVGLLEVVPQRMNERPPFYHGRSDLETLLASDQSRDWIKISEMFLGKVPEN 435
Query: 120 FSFLPKHKANSW 131
F F+PKH AN++
Sbjct: 436 FLFIPKHNANAY 447
>gi|224105275|ref|XP_002313751.1| predicted protein [Populus trichocarpa]
gi|222850159|gb|EEE87706.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS ER +ILK+YV GLEHWGSDT+GVETTR FLLE
Sbjct: 231 MIARGALIKPWIFTEIKEQRHWDISSGERLNILKDYVRSGLEHWGSDTKGVETTRHFLLE 290
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RY+PVGLL+ Q++N RPP Y+GR++LETLM S + +DW++ISEMLLGK+P
Sbjct: 291 WLSYTCRYVPVGLLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWVRISEMLLGKVPDA 350
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 351 FTFAPKHKSNAY 362
>gi|255074587|ref|XP_002500968.1| predicted protein [Micromonas sp. RCC299]
gi|226516231|gb|ACO62226.1| predicted protein [Micromonas sp. RCC299]
Length = 662
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DIS+ ER D+LK+Y +GLEHWG+D RGV TRRFLLE
Sbjct: 522 MIARGALIKPWIFTEIKERRDWDISATERLDMLKDYAAFGLEHWGADARGVANTRRFLLE 581
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE ++QRPP Y GR++LETL++S N DW+KI+ MLLG P
Sbjct: 582 WLSFLHRYVPVGLLERMPVGIHQRPPNYVGRSDLETLLSSPNSEDWVKITTMLLGPTPDN 641
Query: 120 FSFLPKHKANSW 131
FSF PKHK+N++
Sbjct: 642 FSFQPKHKSNAY 653
>gi|195484562|ref|XP_002090745.1| GE13280 [Drosophila yakuba]
gi|194176846|gb|EDW90457.1| GE13280 [Drosophila yakuba]
Length = 609
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIFQEIKEK + SS +R+++L+++ NYGLEHWGSDT+GVETTRRFLLE
Sbjct: 478 MIGRGALIKPWIFQEIKEKHSWSPSSGQRYEMLQKFCNYGLEHWGSDTKGVETTRRFLLE 537
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL+RYIP L + QK+N RP Y GR+E+ETLM+S N +DW+K+SE LLG++P G
Sbjct: 538 WQSFLYRYIPEALQTAPPQKINARPQKYRGRDEMETLMSSGNAADWVKLSESLLGRVPEG 597
Query: 120 FSFLPKHKANSW 131
F+F+PKHKAN++
Sbjct: 598 FTFVPKHKANAF 609
>gi|407404442|gb|EKF29893.1| hypothetical protein MOQ_006305 [Trypanosoma cruzi marinkellei]
Length = 527
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EIK+++ DISS ERF++L+ + NYGL HWGSD RGV TTRRFL E
Sbjct: 386 MIGRGALIKPWIFEEIKQEQPRDISSHERFEMLRSFCNYGLSHWGSDERGVLTTRRFLCE 445
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+P+GLLE Q++N+RPP Y GR+ELETLM S N +DW++ISEMLLG
Sbjct: 446 WLSFLCRYVPLGLLECPPQRINERPPHYEGRDELETLMASDNVTDWVRISEMLLGPAGEK 505
Query: 120 FSFLPKHKANSW 131
F F PKH++NS+
Sbjct: 506 FRFTPKHRSNSY 517
>gi|145341388|ref|XP_001415794.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576017|gb|ABO94086.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 608
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 84/134 (62%), Positives = 108/134 (80%), Gaps = 3/134 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE++ +DISS ERFDILK + ++GLEHWGSDTRGVE+TR++LLE
Sbjct: 461 MLARGALIKPWLFTEIKERRDWDISSRERFDILKSFASFGLEHWGSDTRGVESTRKYLLE 520
Query: 61 WLSFLHRYIPVGLLEST---QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
W+SF +RY P+GLL+ + M QRPP + GR++LETLM S SDW+KIS MLLG P
Sbjct: 521 WMSFTYRYTPIGLLDHSYGAAAMTQRPPAFVGRDDLETLMASEASSDWVKISTMLLGPPP 580
Query: 118 AGFSFLPKHKANSW 131
GF+F PKHK+N++
Sbjct: 581 EGFAFQPKHKSNAY 594
>gi|334187297|ref|NP_195600.2| tRNA-dihydrouridine synthase 3-like protein [Arabidopsis thaliana]
gi|374095403|sp|Q9T0J6.2|DUS3L_ARATH RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=Zinc finger CCCH domain-containing protein
50; Short=AtC3H50; AltName: Full=tRNA-dihydrouridine
synthase 3-like
gi|332661587|gb|AEE86987.1| tRNA-dihydrouridine synthase 3-like protein [Arabidopsis thaliana]
Length = 691
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DI+S ER +I+K++V +GL+HWGSDT+GVETTR FLLE
Sbjct: 554 MIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSDTKGVETTRHFLLE 613
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + DW++ISEMLLGK+P G
Sbjct: 614 WLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISEMLLGKVPEG 673
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 674 FTFAPKHKSNAY 685
>gi|440794820|gb|ELR15969.1| TIMbarrel protein, putative [Acanthamoeba castellanii str. Neff]
Length = 651
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/132 (62%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE + +DIS+ ERFD+LK++VN+GL HWGSD +GV TTR FLL+
Sbjct: 514 MVARGALIKPWVFTEIKENRDWDISATERFDLLKDFVNFGLMHWGSDDQGVATTREFLLQ 573
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+P+GLLE K++QRPP + GR++ ETL+ S +DW+ ISEMLLG +P G
Sbjct: 574 WLSFLHRYVPIGLLEVMPPKLHQRPPPFFGRSDFETLLASPVVNDWVSISEMLLGPVPDG 633
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 634 FTFTPKHKSNAY 645
>gi|71414125|ref|XP_809176.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873517|gb|EAN87325.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 529
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EIK+++ DISS ERF++L+ + NYGL HWGSD RGV TTRRFL E
Sbjct: 387 MIGRGALIKPWIFEEIKQEQPRDISSQERFEMLRSFCNYGLSHWGSDERGVLTTRRFLCE 446
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+P+GLLE Q++N+RPP Y GR+ELETLM S N +DW++ISEMLLG
Sbjct: 447 WLSFLCRYVPLGLLECPPQRINERPPHYEGRDELETLMASDNVNDWVRISEMLLGPAGEK 506
Query: 120 FSFLPKHKANSW 131
F F PKH++NS+
Sbjct: 507 FRFTPKHRSNSY 518
>gi|407838161|gb|EKF99972.1| hypothetical protein TCSYLVIO_009102 [Trypanosoma cruzi]
Length = 529
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EIK+++ DISS ERF++L+ + NYGL HWGSD RGV TTRRFL E
Sbjct: 387 MIGRGALIKPWIFEEIKQEQPRDISSQERFEMLRSFCNYGLSHWGSDERGVLTTRRFLCE 446
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+P+GLLE Q++N+RPP Y GR+ELETLM S N +DW++ISEMLLG
Sbjct: 447 WLSFLCRYVPLGLLECPPQRINERPPHYEGRDELETLMASDNVNDWVRISEMLLGPAGEK 506
Query: 120 FSFLPKHKANSW 131
F F PKH++NS+
Sbjct: 507 FRFTPKHRSNSY 518
>gi|154335122|ref|XP_001563801.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060830|emb|CAM37846.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 590
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/133 (64%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EIK ++ DISS+ER D+L+E+ G+ HWGSD RGV TRRFL E
Sbjct: 445 MIGRGALIKPWLFEEIKSGQVKDISSSERLDMLREFCGCGMAHWGSDERGVMATRRFLCE 504
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE Q++N+RPP Y GRNELETLM+S + +DWI+ISE+LLG +
Sbjct: 505 WLSFLHRYVPVGLLERLPQRINERPPFYEGRNELETLMSSDSVTDWIRISELLLGPVEEK 564
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 565 FRFTPKHKSNSYE 577
>gi|4490341|emb|CAB38623.1| putative protein [Arabidopsis thaliana]
gi|7270872|emb|CAB80552.1| putative protein [Arabidopsis thaliana]
Length = 700
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DI+S ER +I+K++V +GL+HWGSDT+GVETTR FLLE
Sbjct: 563 MIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSDTKGVETTRHFLLE 622
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + DW++ISEMLLGK+P G
Sbjct: 623 WLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISEMLLGKVPEG 682
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 683 FTFAPKHKSNAY 694
>gi|297801970|ref|XP_002868869.1| dihydrouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314705|gb|EFH45128.1| dihydrouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 691
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DI+S ER +I+K++V +GL+HWGSDT+GVETTR FLLE
Sbjct: 554 MIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSDTKGVETTRHFLLE 613
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + DW++ISEMLLGK+P G
Sbjct: 614 WLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISEMLLGKVPEG 673
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 674 FTFAPKHKSNAY 685
>gi|71422193|ref|XP_812059.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876795|gb|EAN90208.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 529
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 87/132 (65%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EIK+++ DISS ERF++L+ + NYGL HWGSD RGV TTRRFL E
Sbjct: 387 MIGRGALIKPWIFEEIKQEQPRDISSQERFEMLRSFCNYGLSHWGSDERGVLTTRRFLCE 446
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+P+GLLE Q++N+RPP Y GR+ELETLM S N +DW++ISEMLLG
Sbjct: 447 WLSFLCRYVPLGLLECPPQRINERPPHYEGRDELETLMASDNVNDWVRISEMLLGPAGEK 506
Query: 120 FSFLPKHKANSW 131
F F PKH++NS+
Sbjct: 507 FRFTPKHRSNSY 518
>gi|223997918|ref|XP_002288632.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975740|gb|EED94068.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 378
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/134 (67%), Positives = 110/134 (82%), Gaps = 2/134 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+ EIKE++ +DIS+ ER D+LK++V +GLEHWGSD +GV TRRFLLE
Sbjct: 245 MLGRGALIKPWLPTEIKERRHWDISATERLDMLKDFVRFGLEHWGSDQQGVNYTRRFLLE 304
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPP-MYHGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
W+SFLHRY+PVG+LE Q+MNQRPP GRN+LETLM S NC+DWI+I EMLLG +P
Sbjct: 305 WISFLHRYVPVGMLEVIPQQMNQRPPNNMCGRNDLETLMLSKNCADWIRICEMLLGPVPD 364
Query: 119 GFSFLPKHKANSWK 132
F F PKHKANS+K
Sbjct: 365 DFEFEPKHKANSYK 378
>gi|387194104|gb|AFJ68744.1| hypothetical protein NGATSA_3021200, partial [Nannochloropsis
gaditana CCMP526]
Length = 381
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 110/135 (81%), Gaps = 3/135 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+ EIKE++ +DIS+ ER DILK++V +GLEHWGSD RGV TTRRFLLE
Sbjct: 243 MLGRGALIKPWLPTEIKEQRHWDISATERLDILKQFVGFGLEHWGSDQRGVNTTRRFLLE 302
Query: 61 WLSFLHRYIPVGLLESTQK---MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
WLSFLHRY+PVGLLE + MNQRP + GR++LE+LM S DWIKISE+LLG +P
Sbjct: 303 WLSFLHRYVPVGLLEHLDRPVEMNQRPLPFKGRSDLESLMASPYDQDWIKISELLLGPVP 362
Query: 118 AGFSFLPKHKANSWK 132
+ F F+PKHKANSW+
Sbjct: 363 SSFQFVPKHKANSWE 377
>gi|413917957|gb|AFW57889.1| hypothetical protein ZEAMMB73_676116 [Zea mays]
Length = 264
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DI+S ER +ILK++V +GLEHWGSD +GVETTR FLLE
Sbjct: 127 MIARGALIKPWLFTEIKEQRHWDITSGERLNILKDFVRFGLEHWGSDFKGVETTRHFLLE 186
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y+GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 187 WLSYTCRYIPVGLLDVIPQRLNWRPPSYYGRDDLETLMVSDSAADWIRISEMLLGKVPEG 246
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 247 FTFAPKHKSNAY 258
>gi|342182242|emb|CCC91721.1| putative tRNA-dihydrouridine synthase 3 [Trypanosoma congolense
IL3000]
Length = 534
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 89/134 (66%), Positives = 109/134 (81%), Gaps = 5/134 (3%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EIK ++++DISS ERF++L+ + ++GL HWGSD RGV TRRFL E
Sbjct: 388 MIGRGALIKPWIFEEIKSERVWDISSHERFEMLRRFCDFGLSHWGSDERGVMNTRRFLCE 447
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ELETLM S N DWI+ISEMLLG PAG
Sbjct: 448 WLSFLCRYVPVGLLERQPQRINERPPYYEGRDELETLMASDNVVDWIRISEMLLG--PAG 505
Query: 120 --FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 506 DKFKFTPKHKSNAY 519
>gi|340055011|emb|CCC49319.1| putative tRNA-dihydrouridine synthase 3 [Trypanosoma vivax Y486]
Length = 563
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EIK ++ DISS ERF++L+ + ++GL HWGSD RG+ TTRRFL E
Sbjct: 417 MIGRGALIKPWVFEEIKTGQVRDISSHERFEMLRRFCDFGLSHWGSDERGILTTRRFLCE 476
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GRNELETLM S N +DWI+ISEMLLG
Sbjct: 477 WLSFLCRYVPVGLLERLPQRINERPPHYEGRNELETLMASDNAADWIRISEMLLGPAGGK 536
Query: 120 FSFLPKHKANSW 131
F F PKH++NS+
Sbjct: 537 FRFTPKHRSNSY 548
>gi|308493062|ref|XP_003108721.1| hypothetical protein CRE_11115 [Caenorhabditis remanei]
gi|308248461|gb|EFO92413.1| hypothetical protein CRE_11115 [Caenorhabditis remanei]
Length = 548
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EI E++ +DIS+ ERFD+LK+++NYGL+HWGSD GVE TRRFLLE
Sbjct: 417 MIGRGALIKPWIFTEIDERRTWDISATERFDLLKKFINYGLDHWGSDDAGVERTRRFLLE 476
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RYIPVG+LE Q++N RPP Y GRNELETL++S DWI+IS+ LLG P G
Sbjct: 477 FLSFQCRYIPVGILERLPQRINDRPPRYQGRNELETLLSSQKADDWIEISKRLLGPTPEG 536
Query: 120 FSFLPKHKANSW 131
F F+PKHKA+S+
Sbjct: 537 FQFIPKHKASSY 548
>gi|300175488|emb|CBK20799.2| unnamed protein product [Blastocystis hominis]
Length = 562
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 109/131 (83%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWI EIKE++ +DIS+ ER +I+K + +YGLEHWGSD +GV+ TRRFLLE
Sbjct: 430 MIGRGALIKPWICTEIKERRHWDISAGERLEIVKRFCDYGLEHWGSDEQGVDRTRRFLLE 489
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSFL RY+PVG+LE Q++NQRP +Y GR+ELETL+ S N DWIKISEM LG + GF
Sbjct: 490 WLSFLCRYVPVGILERPQRINQRPFVYVGRSELETLLGSHNAKDWIKISEMFLGPVAEGF 549
Query: 121 SFLPKHKANSW 131
+F+PKHK+N++
Sbjct: 550 TFIPKHKSNAY 560
>gi|308453103|ref|XP_003089301.1| hypothetical protein CRE_11589 [Caenorhabditis remanei]
gi|308241223|gb|EFO85175.1| hypothetical protein CRE_11589 [Caenorhabditis remanei]
Length = 548
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EI E++ +DIS+ ERFD+LK++ NYGL+HWGSD GVE TRRFLLE
Sbjct: 417 MIGRGALIKPWIFTEIDERRTWDISATERFDLLKKFTNYGLDHWGSDDAGVERTRRFLLE 476
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RYIPVG+LE Q++N RPP Y GRNELETL++S DWI+IS+ LLG P G
Sbjct: 477 FLSFQCRYIPVGILERLPQRINDRPPRYQGRNELETLLSSQKADDWIEISKRLLGPTPEG 536
Query: 120 FSFLPKHKANSW 131
F F+PKHKA+S+
Sbjct: 537 FQFIPKHKASSY 548
>gi|146083263|ref|XP_001464693.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398013404|ref|XP_003859894.1| hypothetical protein, conserved [Leishmania donovani]
gi|134068787|emb|CAM59721.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322498112|emb|CBZ33187.1| hypothetical protein, conserved [Leishmania donovani]
Length = 595
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 85/132 (64%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EIK ++ DISS+ER D+LKE+ G+ HWG+D RGV TTRRFL E
Sbjct: 450 MIGRGALIKPWLFEEIKSGQVKDISSSERLDMLKEFCACGMAHWGADERGVMTTRRFLCE 509
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE Q++N+RPP Y GR+ELETLM+S + DW++ISE+LLG +
Sbjct: 510 WLSFLHRYVPVGLLERLPQRINERPPFYEGRDELETLMSSDSVKDWMRISELLLGPVEKQ 569
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 570 FRFTPKHKSNSY 581
>gi|307105362|gb|EFN53612.1| hypothetical protein CHLNCDRAFT_25754 [Chlorella variabilis]
Length = 385
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
I RGALIKPWIF EIKE++ +DIS+ ER D+ K + + GLEHWGSD+RGVETTRRFLLEW
Sbjct: 209 IARGALIKPWIFTEIKERRHWDISAGERLDMFKRFCSNGLEHWGSDSRGVETTRRFLLEW 268
Query: 62 LSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
LSF HRYIPVGLLE Q+M+ RPP + GR++LETL+ S N +DW+ +SEMLLG P GF
Sbjct: 269 LSFTHRYIPVGLLEVVPQRMHWRPPAFVGRSDLETLLASDNAADWVAVSEMLLGPAPPGF 328
Query: 121 SFLPKHKANSW 131
F PKHKANS+
Sbjct: 329 VFSPKHKANSY 339
>gi|157867470|ref|XP_001682289.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125742|emb|CAJ03495.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 595
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EIK ++ DISS+ER D+LK++ +G+ HWG+D RGV TTRRFL E
Sbjct: 450 MIGRGALIKPWLFEEIKTGQVKDISSSERLDMLKKFCAHGMAHWGADERGVMTTRRFLCE 509
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE Q++N+RPP Y GR+ELETLM+S + DW++ISE+LLG +
Sbjct: 510 WLSFLHRYVPVGLLERLPQRINERPPFYEGRDELETLMSSDSVKDWVRISELLLGPVERQ 569
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 570 FRFTPKHKSNSY 581
>gi|26451942|dbj|BAC43063.1| unknown protein [Arabidopsis thaliana]
gi|30017287|gb|AAP12877.1| At4g38890 [Arabidopsis thaliana]
Length = 265
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DI+S ER +I+K++V +GL+HWGSDT+GVETTR FLLE
Sbjct: 128 MIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSDTKGVETTRHFLLE 187
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + DW++ISEMLLGK+P G
Sbjct: 188 WLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISEMLLGKVPEG 247
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 248 FTFAPKHKSNAY 259
>gi|281204195|gb|EFA78391.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 664
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKEK+ +DIS++ER D++K++ NYGL+HWGSD GV+ TR FLL
Sbjct: 529 MVARGALIKPWIFTEIKEKRDWDISASERLDLVKQFANYGLDHWGSDQLGVDNTRHFLLN 588
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVG+LE++ K+N+RPP Y GR++LETL+ S+ SDWIKISEM LG +P+
Sbjct: 589 WLSFSHRYVPVGILETSYSKINERPPGYFGRSDLETLLASNQVSDWIKISEMFLGPVPSN 648
Query: 120 FSFLPKHKANSW 131
+ F+PKH +NS+
Sbjct: 649 YDFIPKHNSNSY 660
>gi|393244519|gb|EJD52031.1| FMN-linked oxidoreductase [Auricularia delicata TFB-10046 SS5]
Length = 660
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 85/132 (64%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKEK+ +DISS ER ++L++Y YGL H+GSDT GV TTRRFL E
Sbjct: 522 MIGRGALIKPWIFTEIKEKREWDISSRERLELLRKYCEYGLNHFGSDTTGVNTTRRFLCE 581
Query: 61 WLSFLHRYIPVGLLESTQKM-NQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P+GLLE M N+RPP Y GR+ELETL+ S SDW++ISEM LGK P
Sbjct: 582 ALSFQHRYVPIGLLERLPPMLNERPPYYRGRDELETLLASDRSSDWVRISEMFLGKAPED 641
Query: 120 FSFLPKHKANSW 131
++F+PKHK+N++
Sbjct: 642 WTFVPKHKSNAY 653
>gi|341878027|gb|EGT33962.1| hypothetical protein CAEBREN_05960 [Caenorhabditis brenneri]
Length = 548
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EI E++ +DI++ ERFD+LK++V+YGL+HWGSD GVE TRRFLLE
Sbjct: 417 MIGRGALIKPWIFTEIDERRTWDITATERFDLLKKFVSYGLDHWGSDDAGVERTRRFLLE 476
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RYIPVG+LE Q++N RPP Y GRNELETL++S DWI+IS LLG P G
Sbjct: 477 FLSFQCRYIPVGILERLPQRINDRPPRYQGRNELETLLSSQKADDWIEISTRLLGPTPEG 536
Query: 120 FSFLPKHKANSW 131
F+F+PKHKA+S+
Sbjct: 537 FTFIPKHKASSY 548
>gi|341880472|gb|EGT36407.1| hypothetical protein CAEBREN_19524 [Caenorhabditis brenneri]
Length = 548
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EI E++ +DI++ ERFD+LK++V+YGL+HWGSD GVE TRRFLLE
Sbjct: 417 MIGRGALIKPWIFTEIDERRTWDITATERFDLLKKFVSYGLDHWGSDDAGVERTRRFLLE 476
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RYIPVG+LE Q++N RPP Y GRNELETL++S DWI+IS LLG P G
Sbjct: 477 FLSFQCRYIPVGILERLPQRINDRPPRYQGRNELETLLSSQKADDWIEISTRLLGPTPEG 536
Query: 120 FSFLPKHKANSW 131
F+F+PKHKA+S+
Sbjct: 537 FTFIPKHKASSY 548
>gi|401418813|ref|XP_003873897.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490130|emb|CBZ25391.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 660
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 85/132 (64%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EIK ++ DISS+ER +LKE+ G+ HWG+D RGV TTRRFL E
Sbjct: 515 MIGRGALIKPWLFEEIKSGQVKDISSSERLGMLKEFCACGMAHWGADERGVMTTRRFLCE 574
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+PVGLLE Q++N+RPP Y GR+ELETLM+S + DWI+ISE+LLG +
Sbjct: 575 WLSFLHRYVPVGLLERLPQRINERPPFYEGRDELETLMSSDSVKDWIRISELLLGPVEKQ 634
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 635 FRFTPKHKSNSY 646
>gi|301119491|ref|XP_002907473.1| tRNA-dihydrouridine synthase 3 [Phytophthora infestans T30-4]
gi|262105985|gb|EEY64037.1| tRNA-dihydrouridine synthase 3 [Phytophthora infestans T30-4]
Length = 681
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/133 (61%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ EIKE++ +DIS++ER D+LK++V +GLEHWGSD +GV TRR+LLE
Sbjct: 547 MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLE 606
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL RYIPVG+LE+ Q++N RP Y+GR++LETLM S DW+KISEMLLG +P G
Sbjct: 607 WQSFLCRYIPVGVLETLPQRINDRPSPYYGRSDLETLMASDQAVDWVKISEMLLGPVPDG 666
Query: 120 FSFLPKHKANSWK 132
F F+PKH+AN+++
Sbjct: 667 FQFVPKHRANAYQ 679
>gi|261329882|emb|CBH12865.1| tRNA-dihydrouridine synthase 3, putative [Trypanosoma brucei
gambiense DAL972]
Length = 528
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 88/134 (65%), Positives = 108/134 (80%), Gaps = 5/134 (3%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EIK +++DISS ERF++L+ + N+GL HWG+D RGV TRRFL E
Sbjct: 382 MIGRGALIKPWIFEEIKTGRVWDISSHERFEMLRRFCNFGLSHWGADERGVLNTRRFLCE 441
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ELETLM S + DWI+ISEMLLG PAG
Sbjct: 442 WLSFLCRYVPVGLLERPPQRINERPPYYEGRDELETLMASDSAVDWIRISEMLLG--PAG 499
Query: 120 --FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 500 DKFRFTPKHKSNAY 513
>gi|17543114|ref|NP_500379.1| Protein Y37E11B.5 [Caenorhabditis elegans]
gi|351065370|emb|CCD61343.1| Protein Y37E11B.5 [Caenorhabditis elegans]
Length = 554
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EI E++ +DISS ERFD+LK++V+YGL+HWGSD GVE TRRFLLE
Sbjct: 423 MIGRGALIKPWIFTEIDERRTWDISSTERFDLLKKFVDYGLDHWGSDDAGVERTRRFLLE 482
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RYIPVG+LE Q++N RPP + GRNELETL++S DWI+IS LLG P G
Sbjct: 483 FLSFQCRYIPVGILERLPQRINDRPPRFCGRNELETLLSSQKADDWIEISTRLLGPTPEG 542
Query: 120 FSFLPKHKANSW 131
F F+PKHKA+S+
Sbjct: 543 FQFIPKHKASSY 554
>gi|66801291|ref|XP_629571.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74850928|sp|Q54CU9.1|DUS3L_DICDI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|60462949|gb|EAL61146.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 671
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 106/132 (80%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DIS++ER D ++++ NYGL+HWGSD GV+ TR+FLL
Sbjct: 537 MIARGALIKPWIFTEIKEKREWDISASERLDFIRDFANYGLDHWGSDRIGVDNTRKFLLN 596
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSF HRYIPVGLL+ MN+RPP Y GR++LETL+ S+ DWIKI+EM LG + + +
Sbjct: 597 WLSFSHRYIPVGLLDKVHYMNERPPAYFGRSDLETLLASTQVKDWIKITEMFLGPVTSDY 656
Query: 121 SFLPKHKANSWK 132
SF+PKH +NS++
Sbjct: 657 SFVPKHNSNSYE 668
>gi|330797093|ref|XP_003286597.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
gi|325083422|gb|EGC36875.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
Length = 561
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 107/132 (81%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKEK+ +DIS+ ER D++++YV+YGL+HWGSD GV+ TR+FLL
Sbjct: 427 MVARGALIKPWIFTEIKEKRDWDISATERLDLIRDYVHYGLDHWGSDKIGVDNTRKFLLN 486
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+LSF HRY+PVGLLES KMN+RPP Y GR++LETL+ S+ DWIKISEM LG + F
Sbjct: 487 FLSFSHRYVPVGLLESVHKMNERPPPYFGRSDLETLLASNQVKDWIKISEMFLGPVSDNF 546
Query: 121 SFLPKHKANSWK 132
F+PKH +N+++
Sbjct: 547 VFVPKHNSNAYE 558
>gi|328877006|gb|EGG25369.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 699
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS++ER D++K++VNYGL HWGSD +GV+ TR FLL
Sbjct: 564 MVARGALIKPWIFTEIKERRDWDISASERLDLIKDFVNYGLTHWGSDQQGVDNTRHFLLN 623
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVG+LES K+N+RPP Y GR+++ETLM SSN DW+KISEM LG +
Sbjct: 624 WLSFTHRYVPVGILESAYSKINERPPGYFGRSDMETLMCSSNIRDWVKISEMFLGPVSQD 683
Query: 120 FSFLPKHKANSWK 132
+ F+PKH +NS++
Sbjct: 684 YIFVPKHNSNSYE 696
>gi|72391948|ref|XP_846268.1| tRNA-dihydrouridine synthase 3 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359888|gb|AAX80315.1| tRNA-dihydrouridine synthase 3, putative [Trypanosoma brucei]
gi|70802804|gb|AAZ12709.1| tRNA-dihydrouridine synthase 3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 528
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 5/134 (3%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF+EIK +++DISS ERF++L+ + N+GL HWG+D RGV TRRFL E
Sbjct: 382 MIGRGALVKPWIFEEIKTGRVWDISSHERFEMLRRFCNFGLSHWGADERGVLNTRRFLCE 441
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ELETLM S + DWI+ISEMLLG PAG
Sbjct: 442 WLSFLCRYVPVGLLERPPQRINERPPYYEGRDELETLMASDSAVDWIRISEMLLG--PAG 499
Query: 120 --FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 500 DKFRFTPKHKSNAY 513
>gi|348690864|gb|EGZ30678.1| hypothetical protein PHYSODRAFT_324006 [Phytophthora sojae]
Length = 668
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 82/132 (62%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ EIKE++ +DIS++ER D+LK++ +GLEHWGSD +GV TRR+LLE
Sbjct: 534 MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFCRFGLEHWGSDQKGVNRTRRYLLE 593
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL RYIPVGLLE+ Q++N RP Y+GRN+LETLM S DW+KISEMLLG + G
Sbjct: 594 WQSFLCRYIPVGLLEALPQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVQDG 653
Query: 120 FSFLPKHKANSW 131
F F+PKH+AN++
Sbjct: 654 FQFVPKHRANAY 665
>gi|209875549|ref|XP_002139217.1| dihydrouridine synthase family protein [Cryptosporidium muris RN66]
gi|209554823|gb|EEA04868.1| dihydrouridine synthase family protein [Cryptosporidium muris RN66]
Length = 716
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/133 (63%), Positives = 111/133 (83%), Gaps = 3/133 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF EIKE++++DIS+ ERF+ LK++V++GL+HWG+DT G+ TRRFLLE
Sbjct: 583 MIGRGALLKPWIFTEIKEQRIWDISAGERFEFLKQFVSFGLDHWGTDTVGIANTRRFLLE 642
Query: 61 WLSFLHRYIPVGLLE---STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
LSF HRYIPVGLLE ++Q N R P Y GRN+LETL++S+ DWI++SEMLLGK+P
Sbjct: 643 LLSFYHRYIPVGLLEQPINSQNFNWRVPQYIGRNDLETLLSSNKVRDWIRLSEMLLGKVP 702
Query: 118 AGFSFLPKHKANS 130
+ F F+PKHK+NS
Sbjct: 703 SNFVFIPKHKSNS 715
>gi|300122290|emb|CBK22863.2| unnamed protein product [Blastocystis hominis]
Length = 516
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/131 (64%), Positives = 105/131 (80%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWI EIKE++ +DIS+ ER +I+K + +YGLEHWGSD +GV+ TRRFLLE
Sbjct: 380 MIGRGALIKPWICTEIKERRHWDISAGERLEIVKRFCDYGLEHWGSDAQGVDRTRRFLLE 439
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSFL RY+P+GLLE Q M QRP Y GR+ELETL+ S DWIKISEM LG + GF
Sbjct: 440 WLSFLCRYVPIGLLEHPQTMQQRPVAYVGRSELETLLGSRRAEDWIKISEMFLGPVAEGF 499
Query: 121 SFLPKHKANSW 131
+F+PKH++++W
Sbjct: 500 TFIPKHRSSAW 510
>gi|58271188|ref|XP_572750.1| tRNA dihydrouridine synthase [Cryptococcus neoformans var.
neoformans JEC21]
gi|338818019|sp|P0CN28.1|DUS3_CRYNJ RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|57229009|gb|AAW45443.1| tRNA dihydrouridine synthase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 725
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER + +K++ +GL HWGSDT+GV TTRRFL E
Sbjct: 587 MVARGALIKPWIFTEIKERREWDISAVERLEGIKKFAEFGLSHWGSDTQGVNTTRRFLCE 646
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP Y GRNELETL+ S DW+KISEM LGK+ G
Sbjct: 647 ALSFQHRYIPIGLLERLPAKLNERPPAYRGRNELETLLASPFAGDWVKISEMFLGKVDEG 706
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+N++
Sbjct: 707 FSFVPKHKSNAY 718
>gi|134114502|ref|XP_774081.1| hypothetical protein CNBH0060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818018|sp|P0CN29.1|DUS3_CRYNB RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|50256713|gb|EAL19434.1| hypothetical protein CNBH0060 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 725
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER + +K++ +GL HWGSDT+GV TTRRFL E
Sbjct: 587 MVARGALIKPWIFTEIKERREWDISAVERLEGIKKFAEFGLSHWGSDTQGVNTTRRFLCE 646
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP Y GRNELETL+ S DW+KISEM LGK+ G
Sbjct: 647 ALSFQHRYIPIGLLERLPAKLNERPPAYRGRNELETLLASPFAGDWVKISEMFLGKVDEG 706
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+N++
Sbjct: 707 FSFVPKHKSNAY 718
>gi|440800662|gb|ELR21697.1| Dihydrouridine synthase (Dus) [Acanthamoeba castellanii str. Neff]
Length = 354
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE + +DIS+ ERFD+LK++VN+GL HWGSD +GV TTR FLL+
Sbjct: 217 MVARGALIKPWVFTEIKENRDWDISATERFDLLKDFVNFGLMHWGSDDQGVATTREFLLQ 276
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY+P+GLLE K++QRPP + GR++ ETL+ S +DW+ ISEMLLG +P G
Sbjct: 277 WLSFLHRYVPIGLLEVMPPKLHQRPPPFFGRSDFETLLASPVVNDWVSISEMLLGPVPDG 336
Query: 120 FSFLPKHKANSWK 132
F+F PKHK+N++
Sbjct: 337 FTFTPKHKSNAYN 349
>gi|268553095|ref|XP_002634530.1| Hypothetical protein CBG08326 [Caenorhabditis briggsae]
Length = 551
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/132 (64%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EI E++ +DI++ ERFD+LK++ +YGL+HWGSD GVE TRRFLLE
Sbjct: 420 MIGRGALIKPWIFTEIDERRTWDITATERFDLLKKFTSYGLDHWGSDDAGVERTRRFLLE 479
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RYIPVG+LE Q++N RPP Y GRNELETL++S DWI+IS+ L+G P G
Sbjct: 480 FLSFQCRYIPVGILERLPQRINDRPPRYQGRNELETLLSSQKADDWIEISKRLMGPTPEG 539
Query: 120 FSFLPKHKANSW 131
F F+PKHKA+S+
Sbjct: 540 FQFIPKHKASSY 551
>gi|301784767|ref|XP_002927798.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Ailuropoda
melanoleuca]
Length = 646
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 106/132 (80%), Gaps = 2/132 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER IL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 517 MVARGALLKPWLFTEIKEQRHWDISSSERLAILQDFTHYGLEHWGSDTQGVEKTRRFLLE 576
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSFL RY+ L Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P F
Sbjct: 577 WLSFLCRYVRPERL--PQRINERPPYYLGRDYLETLMASQRAADWIRISEMLLGPVPPDF 634
Query: 121 SFLPKHKANSWK 132
FLPKHKAN++K
Sbjct: 635 VFLPKHKANAYK 646
>gi|321261612|ref|XP_003195525.1| tRNA dihydrouridine synthase [Cryptococcus gattii WM276]
gi|317461999|gb|ADV23738.1| tRNA dihydrouridine synthase, putative [Cryptococcus gattii WM276]
Length = 725
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER + ++++ +GL HWGSDT+GV TTRRFL E
Sbjct: 587 MVARGALIKPWIFTEIKERREWDISAVERLEGIRKFAEFGLSHWGSDTQGVNTTRRFLCE 646
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP Y GRNELETL+ S DW+KISEMLLGK+ G
Sbjct: 647 ALSFQHRYIPIGLLERLPGKLNERPPAYRGRNELETLLASPFAGDWVKISEMLLGKVDEG 706
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+N++
Sbjct: 707 FSFVPKHKSNAY 718
>gi|384245556|gb|EIE19049.1| FMN-linked oxidoreductase [Coccomyxa subellipsoidea C-169]
Length = 669
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/132 (61%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M RGALIKPW+F EIKE++ +DIS+ ER DI K + ++GL HWGSD RGVE+TRRFLLE
Sbjct: 523 MFARGALIKPWLFTEIKEQRHWDISAGERLDIFKRFCSHGLLHWGSDARGVESTRRFLLE 582
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W+SF HRYIP+ L+E Q+++ R P Y GR++LETL+ S + +DW++ISEMLLG +PA
Sbjct: 583 WMSFTHRYIPLELMEVVPQRLHWRAPAYVGRSQLETLLASESAADWVRISEMLLGPVPAN 642
Query: 120 FSFLPKHKANSW 131
FSF PKHKAN++
Sbjct: 643 FSFAPKHKANAY 654
>gi|405122501|gb|AFR97268.1| tRNA dihydrouridine synthase [Cryptococcus neoformans var. grubii
H99]
Length = 721
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER + +K++ +GL HWGSDT+GV TTRRFL E
Sbjct: 583 MVARGALIKPWIFTEIKERREWDISAVERLEGIKKFAEFGLSHWGSDTQGVNTTRRFLCE 642
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP Y GRNELETL+ S DW+KISEM LGK+ G
Sbjct: 643 ALSFQHRYIPIGLLERLPGKLNERPPAYRGRNELETLLASPFAGDWVKISEMFLGKVDEG 702
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+N++
Sbjct: 703 FSFVPKHKSNAY 714
>gi|281348023|gb|EFB23607.1| hypothetical protein PANDA_017628 [Ailuropoda melanoleuca]
Length = 610
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 106/132 (80%), Gaps = 2/132 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER IL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 481 MVARGALLKPWLFTEIKEQRHWDISSSERLAILQDFTHYGLEHWGSDTQGVEKTRRFLLE 540
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSFL RY+ L Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P F
Sbjct: 541 WLSFLCRYVRPERL--PQRINERPPYYLGRDYLETLMASQRAADWIRISEMLLGPVPPDF 598
Query: 121 SFLPKHKANSWK 132
FLPKHKAN++K
Sbjct: 599 VFLPKHKANAYK 610
>gi|325188682|emb|CCA23213.1| tRNAdihydrouridine synthase 3 putative [Albugo laibachii Nc14]
Length = 637
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ EIKE++ FDIS++ERFD+LK++V +GLEHWG+D +GV TRR+LLE
Sbjct: 485 MVARGALIKPWLPIEIKERRHFDISASERFDLLKDFVKFGLEHWGTDQKGVNRTRRYLLE 544
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W SFL RYIPVG+LE Q++N RP Y+GRN+LETLM S DWIK+SE+LLG +P
Sbjct: 545 WQSFLCRYIPVGILEQLPQRINDRPAPYYGRNDLETLMASDQAVDWIKLSELLLGSVPEE 604
Query: 120 FSFLPKHKANSW 131
F F+PKHKAN++
Sbjct: 605 FKFVPKHKANAF 616
>gi|255078812|ref|XP_002502986.1| predicted protein [Micromonas sp. RCC299]
gi|226518252|gb|ACO64244.1| predicted protein [Micromonas sp. RCC299]
Length = 361
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 106/133 (79%), Gaps = 2/133 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+ EIKE++++DIS++ER I ++ +GLEHWGSD RGVETTRRF++E
Sbjct: 229 MIGRGALIKPWVLTEIKERRVWDISASERLAIFGDFARHGLEHWGSDERGVETTRRFMME 288
Query: 61 WLSFLHRYIPVGLLES--TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
W+S+ HRY+PVGLLES QKM+ RP Y GRNELETL+ S DW +++EM LGK
Sbjct: 289 WMSYTHRYVPVGLLESGVAQKMHLRPAPYSGRNELETLLASDAVEDWSRVAEMFLGKPAP 348
Query: 119 GFSFLPKHKANSW 131
GFSF+PKHK+NS+
Sbjct: 349 GFSFVPKHKSNSY 361
>gi|443895009|dbj|GAC72355.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
Length = 816
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 80/132 (60%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER D+++++ +YGLEHWGSDT GV TTRRF+ E
Sbjct: 675 MIARGALIKPWLFTEIKERRDWDISSRERLDMIRDFAHYGLEHWGSDTHGVNTTRRFMCE 734
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+SF HRY+P GLLE ++N RPPM+ GR+ELETL+ S DW+K+SEM LGK P
Sbjct: 735 MMSFTHRYVPTGLLEFLPSRLNDRPPMFRGRDELETLLASGKADDWVKVSEMFLGKAPDE 794
Query: 120 FSFLPKHKANSW 131
+SF PKHK++S+
Sbjct: 795 WSFTPKHKSSSY 806
>gi|323449937|gb|EGB05821.1| hypothetical protein AURANDRAFT_1138 [Aureococcus anophagefferens]
Length = 367
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ E+ EK+ +DIS++ER DIL+++ +GL+HWG+D GV RRFLLE
Sbjct: 236 MLARGALIKPWLPTELHEKRAWDISASERLDILRDFAKFGLDHWGADDCGVGRCRRFLLE 295
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFLHRY PVGLLE Q+MN RPP + GRN+LETLM S + DW+ ISEMLLGK+P
Sbjct: 296 WLSFLHRYTPVGLLERLPQRMNDRPPKFVGRNDLETLMASDDSRDWVTISEMLLGKVPDD 355
Query: 120 FSFLPKHKANSW 131
FSF PKHKANS+
Sbjct: 356 FSFTPKHKANSY 367
>gi|308798905|ref|XP_003074232.1| MGC53781 protein (ISS) [Ostreococcus tauri]
gi|116000404|emb|CAL50084.1| MGC53781 protein (ISS), partial [Ostreococcus tauri]
Length = 555
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 3/134 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE++ +DISS+ERFDILK +V++GLEHWG D+RGVE TR++LLE
Sbjct: 408 MLARGALIKPWLFTEIKERRDWDISSSERFDILKSFVSHGLEHWGCDSRGVENTRKYLLE 467
Query: 61 WLSFLHRYIPVGLLESTQK---MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
W+SF RY P+G+LE + M QRPP + GR++LETLM S++ DW+KIS MLLG P
Sbjct: 468 WMSFTCRYTPLGILEQGYEHVDMTQRPPHFVGRDDLETLMASTDARDWVKISTMLLGPPP 527
Query: 118 AGFSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 528 ENFNFQPKHKSNAY 541
>gi|71023677|ref|XP_762068.1| hypothetical protein UM05921.1 [Ustilago maydis 521]
gi|74699222|sp|Q4P1U2.1|DUS3_USTMA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|46101502|gb|EAK86735.1| hypothetical protein UM05921.1 [Ustilago maydis 521]
Length = 867
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/132 (59%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER D+++++ YGL HWGSDT GV TTRRF+ E
Sbjct: 726 MIARGALIKPWLFTEIKERRDWDISSRERLDMMRKFAEYGLTHWGSDTHGVNTTRRFMCE 785
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+SF HRY+P GLLE ++N RPP++ GR+ELETL+ SSN DW+K++EM LGK P
Sbjct: 786 MMSFTHRYVPTGLLEFLPSRLNDRPPLFRGRDELETLLASSNAQDWVKLTEMFLGKPPQE 845
Query: 120 FSFLPKHKANSW 131
+SF PKHK++S+
Sbjct: 846 WSFTPKHKSSSY 857
>gi|426193983|gb|EKV43915.1| hypothetical protein AGABI2DRAFT_187624 [Agaricus bisporus var.
bisporus H97]
Length = 616
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/133 (60%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF EIKE++ +DIS+ ER D++++YVNYGL H+GSDT GV TTRR+L E
Sbjct: 481 MVGRGALIKPWIFTEIKERREWDISARERLDLIRDYVNYGLNHFGSDTAGVNTTRRYLCE 540
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE ++N R P +HGR +LETL++S + DWIKISEM LG P
Sbjct: 541 ALSFQYRYVPIGLLEQLPGRINDRAPAFHGRTDLETLLSSGDSRDWIKISEMFLGPAPES 600
Query: 120 FSFLPKHKANSWK 132
+ F+PKHK+NS++
Sbjct: 601 WVFIPKHKSNSYE 613
>gi|409077983|gb|EKM78347.1| hypothetical protein AGABI1DRAFT_60503 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 616
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/133 (60%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF EIKE++ +DIS+ ER D++++YVNYGL H+GSDT GV TTRR+L E
Sbjct: 481 MVGRGALIKPWIFTEIKERREWDISARERLDLIRDYVNYGLNHFGSDTAGVNTTRRYLCE 540
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE ++N R P +HGR +LETL++S + DWIKISEM LG P
Sbjct: 541 ALSFQYRYVPIGLLEQLPGRINDRAPAFHGRTDLETLLSSGDSRDWIKISEMFLGPAPET 600
Query: 120 FSFLPKHKANSWK 132
+ F+PKHK+NS++
Sbjct: 601 WVFIPKHKSNSYE 613
>gi|219121577|ref|XP_002181140.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407126|gb|EEC47063.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 545
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 106/134 (79%), Gaps = 2/134 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ EIKE++ +DIS++ER DILK++ +G+EHWG+D +G+ RRFLLE
Sbjct: 409 MLARGALIKPWLPTEIKERRHWDISASERLDILKDFARFGMEHWGTDQQGINNCRRFLLE 468
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMY-HGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
WLSFLHRY PVGLLE Q MNQRPP Y GR++LETL+ S + SDWIKISEMLLG +P
Sbjct: 469 WLSFLHRYCPVGLLEVLPQHMNQRPPAYICGRSDLETLLLSPDSSDWIKISEMLLGPVPD 528
Query: 119 GFSFLPKHKANSWK 132
GF F PKHKA +K
Sbjct: 529 GFRFEPKHKAKGFK 542
>gi|167519967|ref|XP_001744323.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777409|gb|EDQ91026.1| predicted protein [Monosiga brevicollis MX1]
Length = 353
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIKE++ +DISS ERF+ L+E+ YGLEHWGSD GVE TRRFLLE
Sbjct: 221 MLARGALIKPWLFTEIKEQRTWDISSMERFEQLQEFCKYGLEHWGSDHAGVERTRRFLLE 280
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF RYIP GLLE Q MN RPP++ GRN+LETL++S DW+KISEMLLG +P G
Sbjct: 281 MLSFTCRYIPAGLLEVLPQHMNDRPPVFTGRNDLETLLSSQRPHDWVKISEMLLGPVPPG 340
Query: 120 FSFLPKHKANSW 131
F F KHKANSW
Sbjct: 341 FFFEAKHKANSW 352
>gi|400601854|gb|EJP69479.1| dihydrouridine synthase [Beauveria bassiana ARSEF 2860]
Length = 772
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 81/133 (60%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI++ + D S++ER ++++V YGLE WGSD G+ TRRFLLE
Sbjct: 617 MIGRGALIKPWLFEEIEKGQYLDKSASERLTYIEKFVRYGLEAWGSDELGLGFTRRFLLE 676
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N+RPP Y GRN+LETLM S N DWIKISEM LG G
Sbjct: 677 WLSFAHRYVPIGLLERLPPSINERPPAYRGRNDLETLMASPNYKDWIKISEMFLGPCHPG 736
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+NS++
Sbjct: 737 FQFMPKHKSNSYE 749
>gi|281210745|gb|EFA84911.1| CCCH-type Zn finger-containing protein [Polysphondylium pallidum
PN500]
Length = 153
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKEK+ DIS++ER D++K++ +YGL+HWGSD GV+ TR FLL
Sbjct: 18 MVARGALIKPWIFTEIKEKRDCDISASERLDLVKQFAHYGLDHWGSDQLGVDNTRHFLLN 77
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVG+L+++ K+N+RPP Y GR++LETL+ S+ SDWIKISEM LG +P+
Sbjct: 78 WLSFSHRYVPVGILKTSYSKINERPPGYFGRSDLETLLASNQVSDWIKISEMFLGPVPSN 137
Query: 120 FSFLPKHKANSW 131
+ F+PK+ +NS+
Sbjct: 138 YDFIPKNNSNSY 149
>gi|242020724|ref|XP_002430802.1| tRNA-dihydrouridine synthase, putative [Pediculus humanus corporis]
gi|212515999|gb|EEB18064.1| tRNA-dihydrouridine synthase, putative [Pediculus humanus corporis]
Length = 622
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
++ RGAL+KPWIF E+KE++ +DISS ERF+I+K++VNYGLEHWGSDT+GVE TRRFLL+
Sbjct: 487 LLSRGALVKPWIFSELKEQRDWDISSGERFEIIKKFVNYGLEHWGSDTKGVELTRRFLLD 546
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N + P + GR+++ETL S N +DWIKISEMLLG P
Sbjct: 547 WLSFLCRYIPVGLLEHPPQKINDKSPKFVGRDDMETLFGSQNPTDWIKISEMLLGPYPEN 606
Query: 120 FSFLPKHKANSW 131
+ F P+ K N W
Sbjct: 607 YQFTPRVKPNFW 618
>gi|328771087|gb|EGF81127.1| hypothetical protein BATDEDRAFT_10653 [Batrachochytrium
dendrobatidis JAM81]
Length = 624
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 102/126 (80%), Gaps = 1/126 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGAL KPWIF+EIKE+KL+DISS ER D+LK++ +GLE WGSDT GV TTR+F+ E
Sbjct: 499 MVGRGALSKPWIFKEIKERKLWDISSGERLDMLKDFTKFGLECWGSDTMGVNTTRKFMCE 558
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL+RY+PVG+LE Q++N+RP + GRN+LETLM S N DWIKI+EMLLG P
Sbjct: 559 WLSFLYRYVPVGILEVLPQRVNERPEQFVGRNDLETLMASDNSKDWIKITEMLLGPAPES 618
Query: 120 FSFLPK 125
F F+PK
Sbjct: 619 FQFIPK 624
>gi|393216523|gb|EJD02013.1| zinc finger dihydrouridine synthase [Fomitiporia mediterranea
MF3/22]
Length = 653
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF EIKE++ +DIS+ ER ++ ++Y YGL H+GSDT GV TTRR+L E
Sbjct: 515 MVGRGALIKPWIFTEIKERREWDISARERLELTRKYAEYGLNHFGSDTTGVNTTRRYLCE 574
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE ++N RPP + GR+ELETL+ S++ DW+KISEM LGK P G
Sbjct: 575 ALSFTHRYIPIGLLEVLPGRLNDRPPAFRGRDELETLLASTDSRDWVKISEMFLGKAPEG 634
Query: 120 FSFLPKHKANSW 131
++F PKHK+NS+
Sbjct: 635 WTFTPKHKSNSY 646
>gi|392590725|gb|EIW80054.1| FMN-linked oxidoreductase [Coniophora puteana RWD-64-598 SS2]
Length = 694
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/132 (60%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DISS ER +++ +Y YGL H+G+DT GV TTRR+L E
Sbjct: 557 MVARGALIKPWIFTEIKERREWDISSRERLELIGKYAEYGLSHFGTDTAGVNTTRRYLCE 616
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N RPP + GR+ELETL+ S++ DW+KISEM LG PA
Sbjct: 617 ALSFQHRYIPIGLLERLPGKINDRPPAFRGRDELETLLASTDSRDWVKISEMFLGPPPAS 676
Query: 120 FSFLPKHKANSW 131
+SF PKHK+N++
Sbjct: 677 WSFTPKHKSNAY 688
>gi|412992487|emb|CCO18467.1| predicted protein [Bathycoccus prasinos]
Length = 658
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGA+IKPW+FQEIKE++ D+SS+ER + E+ NYG EHWGSD+ GVE TR FL E
Sbjct: 508 MIGRGAIIKPWLFQEIKEQRHIDVSSSERLEYFAEFCNYGFEHWGSDSIGVEKTRTFLCE 567
Query: 61 WLSFLHRYIPVGLLE--STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
W+S+ HRY+PVGLLE S QKM+ RP Y GRN++ETL+ S DWIK+SEM LGK
Sbjct: 568 WMSYTHRYVPVGLLEHASVQKMHLRPQRYFGRNDMETLLASDKVEDWIKVSEMFLGKPKD 627
Query: 119 GFSFLPKHKANSW 131
++F+PKHK+NS+
Sbjct: 628 DWTFVPKHKSNSY 640
>gi|164663047|ref|XP_001732645.1| hypothetical protein MGL_0420 [Malassezia globosa CBS 7966]
gi|190359304|sp|A8PTG4.1|DUS3_MALGO RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|159106548|gb|EDP45431.1| hypothetical protein MGL_0420 [Malassezia globosa CBS 7966]
Length = 766
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS ER D++++Y +YGL HWGSDT+GV TTRRFL E
Sbjct: 631 MIARGALIKPWIFTEIKERRDWDISSRERLDMIRQYASYGLTHWGSDTQGVNTTRRFLCE 690
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P+GLL+ +MN RPP +HGR+ LE+L++S + DW++IS+M LG P
Sbjct: 691 MLSFTHRYVPLGLLDHIPVRMNDRPPPFHGRDPLESLLSSPSAHDWVRISDMFLGPAPPD 750
Query: 120 FSFLPKHKANSWK 132
+ F PKH++N+++
Sbjct: 751 WHFTPKHRSNAYE 763
>gi|302840690|ref|XP_002951897.1| hypothetical protein VOLCADRAFT_105302 [Volvox carteri f.
nagariensis]
gi|300262798|gb|EFJ47002.1| hypothetical protein VOLCADRAFT_105302 [Volvox carteri f.
nagariensis]
Length = 894
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/147 (60%), Positives = 106/147 (72%), Gaps = 16/147 (10%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DIS++ER D+ K++ GLEHWGSD RGVETTRRFLLE
Sbjct: 702 MIGRGALIKPWIFTEIKEQRHWDISASERLDLYKQFCTAGLEHWGSDGRGVETTRRFLLE 761
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNC--------------SDW 105
WLSF RY+PVGLLE Q MN RPP + GR+ELETLM+S +DW
Sbjct: 762 WLSFTCRYVPVGLLEVLPQHMNHRPPAFRGRSELETLMSSEEPQASGVGGGALAGRRADW 821
Query: 106 IKISEMLLGKIPAGF-SFLPKHKANSW 131
I+ISEMLLG PA SF KHK++S+
Sbjct: 822 IRISEMLLGPPPAPITSFTAKHKSSSY 848
>gi|388854796|emb|CCF51689.1| related to DUS3-member of dihydrouridine synthase family [Ustilago
hordei]
Length = 851
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 78/132 (59%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+ EIKE++ +DISS ER D+ +++ YGL HWGSDT GV TTRRF+ E
Sbjct: 710 MIARGALIKPWLLTEIKERRDWDISSRERLDVFRQFAEYGLSHWGSDTHGVNTTRRFMCE 769
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+SF HRY+P GLLE +MN RPP++ GR+ELETL+ S+ DW+K+SEM LGK G
Sbjct: 770 MMSFTHRYVPTGLLEFLPARMNDRPPLFKGRDELETLLASARGKDWVKLSEMFLGKATEG 829
Query: 120 FSFLPKHKANSW 131
+SF PKHK+N++
Sbjct: 830 WSFTPKHKSNAY 841
>gi|308159933|gb|EFO62447.1| Dihydrouridine synthase, putative [Giardia lamblia P15]
Length = 556
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 77/131 (58%), Positives = 102/131 (77%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+I RGAL+KPWIFQEIKE + D+SS R D+L+ + ++ LE++GSD GVE R LE
Sbjct: 420 LIARGALVKPWIFQEIKEGRRIDMSSQSRLDMLRLFASFCLEYYGSDAPGVEKARTQFLE 479
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
SF+ RYIPVG+L+ Q++NQRPPM+ GR+ELETLM S + SDW+KISEML G +PAGF
Sbjct: 480 NWSFMCRYIPVGILDEPQRLNQRPPMFRGRDELETLMASQSASDWVKISEMLFGPVPAGF 539
Query: 121 SFLPKHKANSW 131
SF+PKHK++ +
Sbjct: 540 SFVPKHKSHGY 550
>gi|312377328|gb|EFR24184.1| hypothetical protein AND_11402 [Anopheles darlingi]
Length = 633
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 77/109 (70%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+FQEIKE+K D SS+ERF++LK YVNYGLEHWGSDT+GVE TRRFLLE
Sbjct: 487 MVGRGALIKPWVFQEIKERKNLDPSSSERFEMLKRYVNYGLEHWGSDTKGVENTRRFLLE 546
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
W SFL+RY+P GLLE Q++NQRP + GR++LETLM S+NC+DW+K+
Sbjct: 547 WQSFLYRYVPYGLLERPPQRINQRPEAFRGRDDLETLMASANCNDWVKL 595
>gi|346321645|gb|EGX91244.1| tRNA-dihydrouridine synthase 3 [Cordyceps militaris CM01]
Length = 733
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D S++ER ++++ YGLE WGSD G+ TRRFLLE
Sbjct: 598 MIGRGALVKPWLFEEIEKGQYLDKSASERLAYIEKFARYGLEAWGSDELGLGFTRRFLLE 657
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N+RPP Y GRN+LETL+ S N DWIKISEM LG G
Sbjct: 658 WLSFAHRYVPIGLLERLPPSINERPPAYRGRNDLETLLASPNYKDWIKISEMFLGPCHPG 717
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+NS++
Sbjct: 718 FQFMPKHKSNSYE 730
>gi|343427438|emb|CBQ70965.1| related to DUS3-member of dihydrouridine synthase family
[Sporisorium reilianum SRZ2]
Length = 852
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 76/132 (57%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F EIK+++ +DISS ER D+++++ +YGL HWGSDT GV TTRRF+ E
Sbjct: 711 MLARGALIKPWLFTEIKQRRDWDISSRERLDMMRDFASYGLSHWGSDTHGVNTTRRFMCE 770
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+SF HRY+P GLLE ++N RPP++ GR+ELETL+ SS DW+++SEM LGK P
Sbjct: 771 MMSFTHRYVPTGLLEFLPARLNDRPPLFRGRDELETLLASSKAEDWVRVSEMFLGKAPEE 830
Query: 120 FSFLPKHKANSW 131
+SF PKHK++S+
Sbjct: 831 WSFTPKHKSSSY 842
>gi|340517054|gb|EGR47300.1| hypothetical protein TRIREDRAFT_109015 [Trichoderma reesei QM6a]
Length = 763
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI++ + D SS ER ++++V YGLE WGSD G+ TRRFLLE
Sbjct: 628 MIGRGALIKPWIFEEIEKGQYLDKSSTERLGYIEKFVKYGLEAWGSDELGIGYTRRFLLE 687
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE ++N RPP Y GR+E+ETLM S N DWIKISEM LG + G
Sbjct: 688 YLSFAHRYVPIGLLEHLPPRLNDRPPAYKGRDEMETLMASDNYKDWIKISEMFLGPVHPG 747
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 748 FQFQPKHKSNAYE 760
>gi|303278930|ref|XP_003058758.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459918|gb|EEH57213.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 440
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 102/133 (76%), Gaps = 2/133 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+ EIKE++++DIS+ ER D+ + + +GLEHWG+D +GVETTRRF+LE
Sbjct: 274 MIGRGALIKPWVLTEIKERRVWDISARERLDLFERFGAFGLEHWGADEKGVETTRRFMLE 333
Query: 61 WLSFLHRYIPVGLLES--TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
W+S+ HRY+PVGLLE +Q M RPP Y GR++LETL+ S DW +++ M LG
Sbjct: 334 WMSYTHRYVPVGLLERGVSQTMALRPPAYVGRSDLETLLASDKTEDWRRVARMFLGPEAP 393
Query: 119 GFSFLPKHKANSW 131
GF F+PKH++NS+
Sbjct: 394 GFRFVPKHRSNSY 406
>gi|395329491|gb|EJF61878.1| zinc finger dihydrouridine synthase [Dichomitus squalens LYAD-421
SS1]
Length = 687
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/132 (59%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DIS+ ER +++++Y +YGL H+GSDT GV TTRR+L E
Sbjct: 549 MIGRGALIKPWIFTEIKERREWDISARERLELIRKYADYGLNHFGSDTAGVNTTRRYLCE 608
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RYIP+GLLE K+N+R P Y GR++LETL+ S++ DW+KISEM LG P
Sbjct: 609 ALSFQYRYIPIGLLERIPAKINERAPAYRGRDDLETLLASADSRDWVKISEMFLGPAPES 668
Query: 120 FSFLPKHKANSW 131
++F PKHK+N++
Sbjct: 669 WTFTPKHKSNAY 680
>gi|449546165|gb|EMD37135.1| hypothetical protein CERSUDRAFT_137621 [Ceriporiopsis subvermispora
B]
Length = 684
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 79/132 (59%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DISS ER ++++Y YGL H+GSDT GV TTRR+L E
Sbjct: 546 MIGRGALIKPWIFTEIKERREWDISSRERLGLIRKYAEYGLNHFGSDTAGVNTTRRYLCE 605
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE ++N R P + GRNELETL+ S + DW+KISEM LG P
Sbjct: 606 ALSFQYRYVPIGLLEQLPGRLNDRAPAFRGRNELETLLASPDSRDWVKISEMFLGPAPES 665
Query: 120 FSFLPKHKANSW 131
+SF PKHK+N++
Sbjct: 666 WSFTPKHKSNAY 677
>gi|413917959|gb|AFW57891.1| hypothetical protein ZEAMMB73_676116 [Zea mays]
Length = 145
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 105/124 (84%), Gaps = 1/124 (0%)
Query: 9 KPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLSFLHRY 68
+PW+F EIKE++ +DI+S ER +ILK++V +GLEHWGSD +GVETTR FLLEWLS+ RY
Sbjct: 16 QPWLFTEIKEQRHWDITSGERLNILKDFVRFGLEHWGSDFKGVETTRHFLLEWLSYTCRY 75
Query: 69 IPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSFLPKHK 127
IPVGLL+ Q++N RPP Y+GR++LETLM S + +DWI+ISEMLLGK+P GF+F PKHK
Sbjct: 76 IPVGLLDVIPQRLNWRPPSYYGRDDLETLMVSDSAADWIRISEMLLGKVPEGFTFAPKHK 135
Query: 128 ANSW 131
+N++
Sbjct: 136 SNAY 139
>gi|367052429|ref|XP_003656593.1| hypothetical protein THITE_2121449 [Thielavia terrestris NRRL 8126]
gi|347003858|gb|AEO70257.1| hypothetical protein THITE_2121449 [Thielavia terrestris NRRL 8126]
Length = 708
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF+EI++ + D S++ER ++++V YG+E WGSD G+ TRRFLLE
Sbjct: 571 MIGRGALVKPWIFEEIEKGQYLDKSASERLTYIEKFVRYGMEAWGSDELGLNYTRRFLLE 630
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF +RY+PVGLLE +N RPP Y GRN+LETL+ S N DWIKISEM LG P G
Sbjct: 631 FLSFFNRYVPVGLLEYLPPNLNDRPPAYRGRNDLETLLASKNYKDWIKISEMFLGPAPPG 690
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 691 FKFQPKHKSNSY 702
>gi|392577158|gb|EIW70288.1| hypothetical protein TREMEDRAFT_68591 [Tremella mesenterica DSM
1558]
Length = 687
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EI E++ +DI+ ER + L+++ YGL HWGSDT+G+ TTRRFLLE
Sbjct: 549 MVARGALIKPWIFTEISERREWDITGVERLEGLRKFTEYGLSHWGSDTQGINTTRRFLLE 608
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP + GR ELETL++S DWIKISEM LGK+
Sbjct: 609 ALSFQHRYIPLGLLEILPGKLNERPPAFKGRTELETLLSSPFVGDWIKISEMFLGKVDDD 668
Query: 120 FSFLPKHKANSW 131
F FLPKHK+NS+
Sbjct: 669 FKFLPKHKSNSY 680
>gi|358387738|gb|EHK25332.1| hypothetical protein TRIVIDRAFT_31898 [Trichoderma virens Gv29-8]
Length = 741
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI++ + D SS ER ++++V YGLE WGSD G+ TRRFLLE
Sbjct: 606 MIGRGALIKPWIFEEIEKGQYLDKSSTERLGYIEKFVKYGLEAWGSDELGIGFTRRFLLE 665
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE ++N RPP Y GR+E+ETLM S N DWIKISEM LG + G
Sbjct: 666 YLSFAHRYVPIGLLEHLPPRLNDRPPAYKGRDEMETLMASDNYKDWIKISEMFLGPVHPG 725
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 726 FQFQPKHKSNSYE 738
>gi|358254974|dbj|GAA56664.1| tRNA-dihydrouridine synthase 3 [Clonorchis sinensis]
Length = 499
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 75/109 (68%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EI++ + +DIS+ ER DIL+++ NYGLE WGSDTRGVETTRRF+LE
Sbjct: 390 MIARGALIKPWLFTEIRDCRTWDISANERLDILRDFSNYGLELWGSDTRGVETTRRFMLE 449
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
WLSFL+RYIP G+LE Q++N+RPP Y GRN+LETLM S NC+DWI+I
Sbjct: 450 WLSFLYRYIPYGILERVPQRINERPPAYFGRNDLETLMASENCADWIRI 498
>gi|340924292|gb|EGS19195.1| hypothetical protein CTHT_0058200 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 715
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF+EI++ + D SS+ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 578 MIGRGALVKPWIFEEIEKGQYLDKSSSERLSYIEKFCRYGMEAWGSDELGLNYTRRFLLE 637
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+PVGLLE +N RPP Y GRNELETL+ S N DWIKISEM LG P G
Sbjct: 638 FMSFFHRYVPVGLLEYLPPSLNDRPPAYRGRNELETLLASKNYKDWIKISEMFLGPAPPG 697
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 698 FKFTPKHKSNSYE 710
>gi|298710301|emb|CBJ31922.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 743
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 81/134 (60%), Positives = 104/134 (77%), Gaps = 3/134 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+ E+KEK+ +DISS+ER DI +++VN+GLE+WGSD GV TRRFLLE
Sbjct: 598 MLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEYWGSDQMGVNKTRRFLLE 657
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMY--HGRNELETLMTSSNCSDWIKISEMLLGKIP 117
WLSF RYIP G+LE Q++N++PP + +GR++LE+LM S N DWIKI EMLLG P
Sbjct: 658 WLSFTCRYIPAGVLEVLPQRINEKPPPFTPNGRDDLESLMCSLNPKDWIKICEMLLGPTP 717
Query: 118 AGFSFLPKHKANSW 131
F F PKHKA+S+
Sbjct: 718 KDFEFEPKHKASSY 731
>gi|169616904|ref|XP_001801867.1| hypothetical protein SNOG_11628 [Phaeosphaeria nodorum SN15]
gi|187471071|sp|Q0U9D6.2|DUS3_PHANO RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|160703286|gb|EAT81336.2| hypothetical protein SNOG_11628 [Phaeosphaeria nodorum SN15]
Length = 739
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI++ + D S+ ER ++++ YGL+ WGSD G+ TTRRFLLE
Sbjct: 602 MIGRGALIKPWIFEEIEKGQYLDKSATERLAYIEKFAKYGLQTWGSDELGIGTTRRFLLE 661
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE + RPP + GRN+LETLM S + DWIK+SEM LGK P
Sbjct: 662 WLSFAHRYVPVGLLEHLPPNIQDRPPRFRGRNDLETLMASEHYLDWIKLSEMFLGKAPPT 721
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 722 FKFEPKHKSNAYE 734
>gi|302682790|ref|XP_003031076.1| hypothetical protein SCHCODRAFT_82562 [Schizophyllum commune H4-8]
gi|300104768|gb|EFI96173.1| hypothetical protein SCHCODRAFT_82562 [Schizophyllum commune H4-8]
Length = 701
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DISS ER + ++++V YGL H+G+DT GV TTRR+L E
Sbjct: 566 MIGRGALIKPWIFTEIKERREWDISSRERLEHVRKFVEYGLNHFGADTPGVNTTRRYLCE 625
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RYIP+GLLE K+N+R P + GR++LETL+ S + DW+KISEM LG P
Sbjct: 626 ALSFQYRYIPIGLLERLPGKLNERAPAFKGRDDLETLLASPDSRDWVKISEMFLGPAPDA 685
Query: 120 FSFLPKHKANSWK 132
+SF+PKHK+N+++
Sbjct: 686 WSFMPKHKSNAYE 698
>gi|253748358|gb|EET02530.1| Dihydrouridine synthase, putative [Giardia intestinalis ATCC 50581]
Length = 553
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 102/131 (77%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+I RGAL+KPWIFQEIKE + D+SS RF++LK + ++ LE++GSD GVE R LE
Sbjct: 417 LIARGALVKPWIFQEIKEGRRIDMSSQSRFEMLKLFASFCLEYYGSDGIGVERARNQFLE 476
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
SF+ RYIP+GLLE Q++NQRPPM+ GR+ELETLM S + SDW+KISEML G +P GF
Sbjct: 477 NWSFMCRYIPIGLLEEPQRLNQRPPMFRGRDELETLMASQSASDWVKISEMLFGPVPTGF 536
Query: 121 SFLPKHKANSW 131
+F+PKHK++ +
Sbjct: 537 TFVPKHKSHGY 547
>gi|392560397|gb|EIW53580.1| zinc finger dihydrouridine synthase [Trametes versicolor FP-101664
SS1]
Length = 669
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/132 (58%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DIS+ ER ++ ++Y YGL H+GSDT GV TTRR+L E
Sbjct: 531 MIGRGALIKPWIFTEIKERREWDISARERLELARKYAEYGLNHFGSDTAGVNTTRRYLCE 590
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RYIP+GLLE+ ++N R P + GR+ELETL+ S + DW+KISEM LG P
Sbjct: 591 ALSFQYRYIPIGLLETLPSRINDRAPAFKGRDELETLLASPDSRDWMKISEMFLGPAPES 650
Query: 120 FSFLPKHKANSW 131
++F PKHK+N++
Sbjct: 651 WTFTPKHKSNAF 662
>gi|146422829|ref|XP_001487349.1| hypothetical protein PGUG_00726 [Meyerozyma guilliermondii ATCC
6260]
Length = 607
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S+ ER DIL+++ ++ LEHWGSD GV +RRF+ E
Sbjct: 473 MVARGALIKPWIFEEVEAQQYLDKSATERLDILRKFADFSLEHWGSDEYGVGLSRRFMCE 532
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE K+NQRPP + GRNELETL+ S++ DWIKI+EM GK
Sbjct: 533 FLSFTHRYIPVGILERLPPKINQRPPQWRGRNELETLLGSTDYKDWIKITEMFYGKTGDN 592
Query: 120 FSFLPKHKANSWK 132
F+F+PKHK+N+++
Sbjct: 593 FTFIPKHKSNAYE 605
>gi|223590199|sp|A5DBS1.2|DUS3_PICGU RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|190344863|gb|EDK36628.2| hypothetical protein PGUG_00726 [Meyerozyma guilliermondii ATCC
6260]
Length = 607
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S+ ER DIL+++ ++ LEHWGSD GV +RRF+ E
Sbjct: 473 MVARGALIKPWIFEEVEAQQYLDKSATERLDILRKFADFSLEHWGSDEYGVGLSRRFMCE 532
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE K+NQRPP + GRNELETL+ S++ DWIKI+EM GK
Sbjct: 533 FLSFTHRYIPVGILERLPPKINQRPPQWRGRNELETLLGSTDYKDWIKITEMFYGKTGDN 592
Query: 120 FSFLPKHKANSWK 132
F+F+PKHK+N+++
Sbjct: 593 FTFIPKHKSNAYE 605
>gi|169862298|ref|XP_001837779.1| zinc finger dihydrouridine synthase [Coprinopsis cinerea
okayama7#130]
gi|187471053|sp|A8NZY7.1|DUS3_COPC7 RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|116501141|gb|EAU84036.1| zinc finger dihydrouridine synthase [Coprinopsis cinerea
okayama7#130]
Length = 676
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/132 (58%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DIS+ ER ++++YV YGL H+GSDT GV TTRR+L E
Sbjct: 538 MIGRGALIKPWIFTEIKERREWDISATERLQLIRDYVEYGLNHFGSDTAGVNTTRRYLCE 597
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE K+N+R P + GR++LETL+ S + DW+KISEM LG P
Sbjct: 598 ALSFQYRYVPIGLLERLPAKINERAPAFVGRSDLETLLASPDSQDWVKISEMFLGPAPQS 657
Query: 120 FSFLPKHKANSW 131
+ F PKHK+N++
Sbjct: 658 WVFTPKHKSNAY 669
>gi|389746404|gb|EIM87584.1| FMN-linked oxidoreductase [Stereum hirsutum FP-91666 SS1]
Length = 620
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 76/131 (58%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER D++++Y +GL H+GSDT GV TTRR+L E
Sbjct: 483 MVARGALIKPWIFTEIKERREWDISAVERLDLIRKYAEFGLTHFGSDTAGVNTTRRYLCE 542
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RYIP+GLLE+ ++N R PM+ GR+ELETL+ S + DW+KISEM LG P
Sbjct: 543 ALSFQYRYIPIGLLEALPPRINDRAPMFRGRSELETLLASPDSRDWVKISEMFLGPAPES 602
Query: 120 FSFLPKHKANS 130
++F PKHK+N+
Sbjct: 603 WTFTPKHKSNA 613
>gi|320583736|gb|EFW97949.1| Dihydrouridine synthase [Ogataea parapolymorpha DL-1]
Length = 618
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S++ER L++Y + LEHWGSD GV + RR+L E
Sbjct: 484 MVARGALIKPWIFEEVEAQQYLDKSASERLAYLEKYAKFALEHWGSDEYGVNSARRYLCE 543
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIPVG+LE K+N+RPP + GRNELETL+ SS+ DWIKI+EM LGK G
Sbjct: 544 FISFTHRYIPVGILERLPPKLNERPPPWKGRNELETLLGSSDYKDWIKITEMFLGKAGDG 603
Query: 120 FSFLPKHKANSWK 132
FSF+PKHK+NS++
Sbjct: 604 FSFIPKHKSNSYE 616
>gi|159110381|ref|XP_001705451.1| Dihydrouridine synthase, putative [Giardia lamblia ATCC 50803]
gi|157433536|gb|EDO77777.1| Dihydrouridine synthase, putative [Giardia lamblia ATCC 50803]
Length = 555
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+I RGAL+KPWIFQEIKE + D+SS R ++LK + ++ LE++GSD GVE R LE
Sbjct: 419 LIARGALVKPWIFQEIKEGRRIDMSSQSRLEMLKLFASFCLEYYGSDAPGVEKARAQFLE 478
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
SF+ RYIPVG+L+ QK+NQRPPM+ GR+ELETLM S + SDW+ ISEML G +PAGF
Sbjct: 479 NWSFMCRYIPVGILDEPQKLNQRPPMFRGRDELETLMASQSASDWVTISEMLFGPVPAGF 538
Query: 121 SFLPKHKANSW 131
SF+PKHK++ +
Sbjct: 539 SFVPKHKSHGY 549
>gi|408400075|gb|EKJ79162.1| hypothetical protein FPSE_00637 [Fusarium pseudograminearum CS3096]
Length = 767
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI++ + D SS+ER ++++V YGL+ WGSD G+ TRRFLLE
Sbjct: 632 MIGRGALIKPWLFEEIEKGQYLDKSSSERLRYIEKFVRYGLDAWGSDELGIGFTRRFLLE 691
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N RPP Y GR+E+ETLM SSN DWIKISEM LG +
Sbjct: 692 WLSFAHRYVPIGLLERLPPDLNDRPPAYEGRDEMETLMASSNFRDWIKISEMFLGPVHPT 751
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 752 FKFQPKHKSNSYE 764
>gi|46107564|ref|XP_380841.1| hypothetical protein FG00665.1 [Gibberella zeae PH-1]
Length = 767
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI++ + D SS+ER ++++V YGL+ WGSD G+ TRRFLLE
Sbjct: 632 MIGRGALIKPWLFEEIEKGQYLDKSSSERLRYIEKFVRYGLDAWGSDELGIGFTRRFLLE 691
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N RPP Y GR+E+ETLM SSN DWIKISEM LG +
Sbjct: 692 WLSFAHRYVPIGLLERLPPDLNDRPPAYEGRDEMETLMASSNFRDWIKISEMFLGPVHPT 751
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 752 FKFQPKHKSNSYE 764
>gi|390605069|gb|EIN14460.1| zinc finger dihydrouridine synthase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 675
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DISS ER +++++Y +GL H+GSDT G+ TTRR+L E
Sbjct: 540 MVARGALIKPWIFTEIKERREWDISSRERLELIRKYAEFGLHHFGSDTAGINTTRRYLCE 599
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE K+N RPP + GR++LETL+ S N +DW+KISE LG P
Sbjct: 600 ALSFQYRYVPIGLLEVLPGKLNDRPPAFRGRDDLETLLASDNSADWVKISEWFLGPAPES 659
Query: 120 FSFLPKHKANSWK 132
++F PKHK+NS++
Sbjct: 660 WTFTPKHKSNSYE 672
>gi|336464800|gb|EGO53040.1| hypothetical protein NEUTE1DRAFT_126438 [Neurospora tetrasperma
FGSC 2508]
Length = 737
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPWIF+EI + D S+ ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 599 MVGRGAIIKPWIFEEISAGQYLDKSATERLAYVEKFAKYGMEAWGSDELGLNYTRRFLLE 658
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE MN RPP Y GRNELETL+ S N DWIKISEM LG P
Sbjct: 659 FLSFFHRYVPIGLLEYLPPAMNDRPPAYKGRNELETLLASKNYLDWIKISEMFLGPAPPN 718
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 719 FKFQPKHKSNAYE 731
>gi|398412385|ref|XP_003857517.1| hypothetical protein MYCGRDRAFT_65640 [Zymoseptoria tritici IPO323]
gi|339477402|gb|EGP92493.1| hypothetical protein MYCGRDRAFT_65640 [Zymoseptoria tritici IPO323]
Length = 686
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 79/133 (59%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI + D S+ ER ++++V GLE+WGSD GV TTRRFLLE
Sbjct: 549 MIGRGALVKPWLFEEISSNQYLDKSATERLGYIEKFVRNGLEYWGSDEIGVGTTRRFLLE 608
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE K RPP Y GRNELETL+ S N DWI ISEM LGK
Sbjct: 609 WLSFTCRYVPIGLLEHLPPKFGDRPPAYRGRNELETLLASGNYKDWIAISEMFLGKAHEN 668
Query: 120 FSFLPKHKANSWK 132
F+F PKHK+NS++
Sbjct: 669 FNFQPKHKSNSYE 681
>gi|302924043|ref|XP_003053802.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734743|gb|EEU48089.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 770
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI++ + D SS+ER ++++V YGL+ WGSD G+ TRRFLLE
Sbjct: 635 MIGRGALIKPWIFEEIEKGQYLDKSSSERLGYIEKFVRYGLDAWGSDELGIGFTRRFLLE 694
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE +N RPP Y GR+E+ETLM S+N DWIKISEM LG +
Sbjct: 695 WLSFAHRYVPVGLLEYLPPSLNDRPPKYKGRDEMETLMASNNFRDWIKISEMFLGPVHPT 754
Query: 120 FSFLPKHKANSWK 132
F+F PKHK+N+++
Sbjct: 755 FNFQPKHKSNAYE 767
>gi|85116240|ref|XP_965022.1| hypothetical protein NCU02619 [Neurospora crassa OR74A]
gi|74629110|sp|Q7SG01.1|DUS3_NEUCR RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|28926822|gb|EAA35786.1| hypothetical protein NCU02619 [Neurospora crassa OR74A]
gi|38567151|emb|CAE76445.1| conserved hypothetical protein [Neurospora crassa]
Length = 737
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPWIF+EI + D S+ ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 599 MVGRGAIIKPWIFEEISAGQYLDKSATERLAYVEKFAKYGMEAWGSDELGLNYTRRFLLE 658
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE MN RPP Y GRNELETL+ S N DWIKISEM LG P
Sbjct: 659 FLSFFHRYVPIGLLEYLPPAMNDRPPAYKGRNELETLLASKNYLDWIKISEMFLGPAPPN 718
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 719 FKFQPKHKSNAYE 731
>gi|358391049|gb|EHK40454.1| hypothetical protein TRIATDRAFT_128481 [Trichoderma atroviride IMI
206040]
Length = 650
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI++ + D SS ER ++++V +GLE WGSD G+ TRRFLLE
Sbjct: 515 MIGRGALIKPWIFEEIEKGQYLDKSSTERLGYIEKFVKFGLEAWGSDELGIGFTRRFLLE 574
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE ++N RPP Y GR+E+ET+M S N DWIKISEM LG + G
Sbjct: 575 YLSFAHRYVPIGLLEHLPPRLNDRPPAYKGRDEMETMMASDNYRDWIKISEMFLGPVHPG 634
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 635 FQFQPKHKSNSYE 647
>gi|367018684|ref|XP_003658627.1| hypothetical protein MYCTH_2294623 [Myceliophthora thermophila ATCC
42464]
gi|347005894|gb|AEO53382.1| hypothetical protein MYCTH_2294623 [Myceliophthora thermophila ATCC
42464]
Length = 736
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGA++KPWIF+EI++ + D SS+ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 599 MIGRGAIVKPWIFEEIEKGQYLDKSSSERLTYIEKFARYGMEAWGSDELGLNYTRRFLLE 658
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RY+PVGLLE +N RPP Y GR++LETL+ S N DWIKISEM LG P G
Sbjct: 659 FLSFFCRYVPVGLLEHLPPSLNDRPPAYRGRDDLETLLASKNYKDWIKISEMFLGPAPPG 718
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 719 FKFQPKHKSNSYE 731
>gi|336262846|ref|XP_003346205.1| hypothetical protein SMAC_05742 [Sordaria macrospora k-hell]
gi|380093534|emb|CCC08497.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 739
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPWIF+EI + D S+ ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 601 MVGRGAIIKPWIFEEISAGQYLDKSATERLAYVEKFAKYGMEAWGSDELGLNYTRRFLLE 660
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE MN RPP Y GRNELETL+ S N DWIKISEM LG P
Sbjct: 661 FLSFFHRYVPIGLLEYLPPAMNDRPPAYKGRNELETLLASKNYLDWIKISEMFLGPAPPN 720
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 721 FKFQPKHKSNAYE 733
>gi|346971752|gb|EGY15204.1| tRNA-dihydrouridine synthase [Verticillium dahliae VdLs.17]
Length = 719
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D ++ ER ++++V YGLE WGSD G+ TRRFLLE
Sbjct: 584 MIGRGALVKPWLFEEIEKGQYLDKTATERLGYIEKFVRYGLEAWGSDELGIGFTRRFLLE 643
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
W+SF HRY+P+G+LE +N RPP + GRNE+ETL+ S+N DWIKISEM LG G
Sbjct: 644 WMSFTHRYVPLGILEHLPPSLNDRPPAFRGRNEMETLLASNNYKDWIKISEMYLGPCHPG 703
Query: 120 FSFLPKHKANSWK 132
F+F PKHK+N+++
Sbjct: 704 FTFQPKHKSNAYE 716
>gi|402077899|gb|EJT73248.1| tRNA-dihydrouridine synthase 3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 720
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/132 (57%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI++ + D SS+ER ++ + YG+E WG+D G+ TTRRFLLE
Sbjct: 583 MVARGALIKPWIFEEIEKGQYLDKSSSERLRYVERFCRYGMEAWGADEMGIGTTRRFLLE 642
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE ++N RPP Y GR++LETLM S N DWIKISEM LG
Sbjct: 643 YLSFAHRYVPIGLLEHLPPQINDRPPAYRGRDDLETLMISDNYKDWIKISEMFLGPAHED 702
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 703 FKFQPKHKSNSY 714
>gi|260949371|ref|XP_002618982.1| hypothetical protein CLUG_00141 [Clavispora lusitaniae ATCC 42720]
gi|238846554|gb|EEQ36018.1| hypothetical protein CLUG_00141 [Clavispora lusitaniae ATCC 42720]
Length = 611
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D S+ ER + L+ + N+ +EHWGSD G+E RR++ E
Sbjct: 477 MVARGALIKPWIFEEVDAEQYLDKSATERLEYLRTFANFAVEHWGSDEYGIEVARRYMCE 536
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIPVG+LE K+N+RPP + GRNELETL+ S++ DWIKI+EM+LGK A
Sbjct: 537 FISFTHRYIPVGILERLPPKLNERPPKWKGRNELETLLGSTDYKDWIKITEMILGKASAN 596
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+NS+
Sbjct: 597 FSFIPKHKSNSF 608
>gi|350296901|gb|EGZ77878.1| FMN-linked oxidoreductase [Neurospora tetrasperma FGSC 2509]
Length = 737
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPWIF+EI+ + D S+ ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 599 MVGRGAIIKPWIFEEIRAGQYLDKSATERLAYVEKFAKYGMEAWGSDELGLNYTRRFLLE 658
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE MN RPP Y GRNELETL+ S N DWIKISE+ LG P
Sbjct: 659 FLSFFHRYVPIGLLEYLPPAMNDRPPAYKGRNELETLLASKNYLDWIKISEIFLGPAPPN 718
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 719 FKFQPKHKSNAYE 731
>gi|169770417|ref|XP_001819678.1| tRNA-dihydrouridine synthase 3 [Aspergillus oryzae RIB40]
gi|121804085|sp|Q2UL89.1|DUS3_ASPOR RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|83767537|dbj|BAE57676.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 730
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI+ + D S++ER +++++ YGLE WGSD GV TTRRFLLE
Sbjct: 593 MVGRGALIKPWLFEEIQAGQYLDKSASERLSLVEKFAKYGLETWGSDEHGVGTTRRFLLE 652
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RYIP+GLLE ++ RPP + GRNELETLM S N DWIKI+EM LG
Sbjct: 653 WLSFACRYIPIGLLEYLPPRIQDRPPSWRGRNELETLMGSHNYKDWIKITEMFLGPAHKD 712
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+W+
Sbjct: 713 FRFEPKHKSNAWE 725
>gi|391867317|gb|EIT76563.1| tRNA-dihydrouridine synthase 3 [Aspergillus oryzae 3.042]
Length = 730
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI+ + D S++ER +++++ YGLE WGSD GV TTRRFLLE
Sbjct: 593 MVGRGALIKPWLFEEIQAGQYLDKSASERLSLVEKFAKYGLETWGSDEHGVGTTRRFLLE 652
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RYIP+GLLE ++ RPP + GRNELETLM S N DWIKI+EM LG
Sbjct: 653 WLSFACRYIPIGLLEYLPPRIQDRPPSWRGRNELETLMGSHNYKDWIKITEMFLGPAHKD 712
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+W+
Sbjct: 713 FRFEPKHKSNAWE 725
>gi|238487170|ref|XP_002374823.1| tRNA dihydrouridine synthase, putative [Aspergillus flavus
NRRL3357]
gi|220699702|gb|EED56041.1| tRNA dihydrouridine synthase, putative [Aspergillus flavus
NRRL3357]
Length = 730
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI+ + D S++ER +++++ YGLE WGSD GV TTRRFLLE
Sbjct: 593 MVGRGALIKPWLFEEIQAGQYLDKSASERLSLVEKFAKYGLETWGSDEHGVGTTRRFLLE 652
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RYIP+GLLE ++ RPP + GRNELETLM S N DWIKI+EM LG
Sbjct: 653 WLSFACRYIPIGLLEYLPPRIQDRPPSWRGRNELETLMGSHNYKDWIKITEMFLGPAHKD 712
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+W+
Sbjct: 713 FRFEPKHKSNAWE 725
>gi|389632889|ref|XP_003714097.1| tRNA-dihydrouridine synthase 3 [Magnaporthe oryzae 70-15]
gi|187471055|sp|A4RLF4.1|DUS3_MAGO7 RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|351646430|gb|EHA54290.1| tRNA-dihydrouridine synthase 3 [Magnaporthe oryzae 70-15]
gi|440474257|gb|ELQ43009.1| tRNA-dihydrouridine synthase 3 [Magnaporthe oryzae Y34]
gi|440481190|gb|ELQ61800.1| tRNA-dihydrouridine synthase 3 [Magnaporthe oryzae P131]
Length = 739
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI + D SS ER ++ + YG+E WG+D G+ TTRRFLLE
Sbjct: 602 MIGRGALIKPWVFEEIAAGQYLDKSSTERLGYIERFCRYGMEAWGADEMGIGTTRRFLLE 661
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF +RY+P+GLLE +N RPP Y GR++LETLM S N DWIKISEM LG G
Sbjct: 662 YLSFAYRYVPIGLLERLPPAINDRPPAYRGRDDLETLMASDNYRDWIKISEMFLGPAHEG 721
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 722 FKFQPKHKSNSYE 734
>gi|322695939|gb|EFY87739.1| tRNA-dihydrouridine synthase 3 [Metarhizium acridum CQMa 102]
Length = 764
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI++ + D S++ER ++++V YGL+ WGSD G+ TRRFLLE
Sbjct: 629 MIGRGALIKPWLFEEIQQGQYLDKSASERLTYIEKFVRYGLDAWGSDELGIGFTRRFLLE 688
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE +N RPP Y GRN+LETLM S N DWI I+EM LG + G
Sbjct: 689 WLSFAHRYVPVGLLEVLPPSLNDRPPAYVGRNDLETLMASGNYKDWIHITEMFLGPVHPG 748
Query: 120 FSFLPKHKANSWK 132
F F PKH++N+++
Sbjct: 749 FEFQPKHRSNAYE 761
>gi|344234736|gb|EGV66604.1| hypothetical protein CANTEDRAFT_100359 [Candida tenuis ATCC 10573]
Length = 613
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S++ER DIL+ Y N+ +EHWG+D G+ RRF+ E
Sbjct: 477 MVARGALIKPWIFEEVEAQQYLDKSASERLDILRTYANFAVEHWGTDEYGIGLARRFMCE 536
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE K+N+RPP + GRN+LETL+ SS+ DWIKI+EM LGK
Sbjct: 537 FLSFYHRYIPVGILERLPPKLNERPPKWKGRNDLETLLGSSDYQDWIKITEMFLGKAGEN 596
Query: 120 FSFLPKHKANSWK 132
F F PKHK++S++
Sbjct: 597 FHFTPKHKSSSYE 609
>gi|342321109|gb|EGU13046.1| tRNA-dihydrouridine synthase 3 [Rhodotorula glutinis ATCC 204091]
Length = 819
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/131 (58%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF E+KE++ +DISS ER D++ + +YGLEHWGSD GV RRF+ E
Sbjct: 681 MIARGALVKPWIFTELKERRDWDISSRERLDMIGKLCDYGLEHWGSDQMGVNKCRRFVCE 740
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+PVGLLE MN+RP + GR+ELETL++S DW+KI+EM LG P
Sbjct: 741 ALSFTHRYVPVGLLERLPTNMNERPFAFRGRDELETLLSSDQSKDWVKITEMFLGPTPDD 800
Query: 120 FSFLPKHKANS 130
+SF+PKHKA S
Sbjct: 801 WSFVPKHKAAS 811
>gi|401884151|gb|EJT48323.1| hypothetical protein A1Q1_02606 [Trichosporon asahii var. asahii
CBS 2479]
Length = 673
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EI E++ +DIS+ ER + ++++ YGL HWGSDT GV TTRRFL E
Sbjct: 535 MVARGALIKPWIFTEIAERREWDISATERLEGIRKFAEYGLSHWGSDTMGVNTTRRFLCE 594
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF RY+P+GLLE MN+RPP Y GRNELETL++S SDWIKISEM LG
Sbjct: 595 ALSFQSRYVPIGLLERMPPMMNERPPAYRGRNELETLLSSPLVSDWIKISEMFLGPAGES 654
Query: 120 FSFLPKHKANSW 131
F+F+PKHK++++
Sbjct: 655 FNFVPKHKSSAY 666
>gi|406695892|gb|EKC99190.1| hypothetical protein A1Q2_06507 [Trichosporon asahii var. asahii
CBS 8904]
Length = 673
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EI E++ +DIS+ ER + ++++ YGL HWGSDT GV TTRRFL E
Sbjct: 535 MVARGALIKPWIFTEIAERREWDISATERLEGIRKFAEYGLSHWGSDTMGVNTTRRFLCE 594
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF RY+P+GLLE MN+RPP Y GRNELETL++S SDWIKISEM LG
Sbjct: 595 ALSFQSRYVPIGLLERMPPMMNERPPAYRGRNELETLLSSPLVSDWIKISEMFLGPAGES 654
Query: 120 FSFLPKHKANSW 131
F+F+PKHK++++
Sbjct: 655 FNFVPKHKSSAY 666
>gi|425770630|gb|EKV09098.1| tRNA dihydrouridine synthase, putative [Penicillium digitatum Pd1]
gi|425771936|gb|EKV10364.1| tRNA dihydrouridine synthase, putative [Penicillium digitatum
PHI26]
Length = 729
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D S+ ER ++++ YGL+ WGSD GV TTRRFLLE
Sbjct: 594 MVARGALIKPWIFEEIQTGQYLDKSATERLAYIEKFAKYGLQAWGSDEHGVGTTRRFLLE 653
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+GLLE + RPP + GRNELETLM S N DWIKI+EM LG P
Sbjct: 654 WLSFTYRYVPIGLLEYLPPNIQDRPPAWRGRNELETLMGSGNYKDWIKITEMFLGPAPDT 713
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 714 FKFEPKHKSNSYE 726
>gi|403418685|emb|CCM05385.1| predicted protein [Fibroporia radiculosa]
Length = 1037
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF E+KE++ +DISS ER ++++ Y YGL H+GSDT GV TTRR+L E
Sbjct: 899 MIGRGALIKPWIFTEVKERREWDISSRERLELVRRYAEYGLNHFGSDTAGVNTTRRYLCE 958
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RYIP+GLLE+ ++N R P + GR+ELETL+ S + DW++ISEM LG P
Sbjct: 959 ALSFQYRYIPIGLLETLPGRLNDRAPSFRGRDELETLLASPDSRDWVRISEMFLGPAPES 1018
Query: 120 FSFLPKHKANSW 131
++F PKHK+N++
Sbjct: 1019 WTFTPKHKSNAY 1030
>gi|254572948|ref|XP_002493583.1| Dihydrouridine synthase [Komagataella pastoris GS115]
gi|238033382|emb|CAY71404.1| Dihydrouridine synthase [Komagataella pastoris GS115]
gi|328354589|emb|CCA40986.1| tRNA-dihydrouridine synthase 3 [Komagataella pastoris CBS 7435]
Length = 618
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI ++ D S+ ER +L++Y + L+HWGSD GV T RRF+ E
Sbjct: 485 MVARGALIKPWIFEEINSEQYIDKSATERLALLEQYSKFALQHWGSDDYGVNTARRFMCE 544
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+PVG++E K+NQRPP + GRNELETL+ S + DWIKI+EM LG G
Sbjct: 545 FMSFTHRYVPVGIMERLPPKLNQRPPTWKGRNELETLLGSPDYRDWIKITEMFLGPTTEG 604
Query: 120 FSFLPKHKANSWK 132
FSF PKH++NS+K
Sbjct: 605 FSFTPKHRSNSYK 617
>gi|187471073|sp|Q2HDP2.2|DUS3_CHAGB RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
Length = 713
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D SS+ER ++++V YG+E WGSD G+ TRRFLLE
Sbjct: 576 MIGRGALVKPWVFEEIEKGQYLDKSSSERLTYIEKFVRYGMEAWGSDELGLNYTRRFLLE 635
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RY+P+GLLE +N+RPP Y GR++LETL S N DWIKISEM LG P G
Sbjct: 636 FLSFFCRYVPIGLLERLPPNLNERPPAYRGRDDLETLFASKNYKDWIKISEMFLGPAPPG 695
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 696 FKFQPKHKSNSYE 708
>gi|116182068|ref|XP_001220883.1| hypothetical protein CHGG_01662 [Chaetomium globosum CBS 148.51]
gi|88185959|gb|EAQ93427.1| hypothetical protein CHGG_01662 [Chaetomium globosum CBS 148.51]
Length = 641
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D SS+ER ++++V YG+E WGSD G+ TRRFLLE
Sbjct: 504 MIGRGALVKPWVFEEIEKGQYLDKSSSERLTYIEKFVRYGMEAWGSDELGLNYTRRFLLE 563
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RY+P+GLLE +N+RPP Y GR++LETL S N DWIKISEM LG P G
Sbjct: 564 FLSFFCRYVPIGLLERLPPNLNERPPAYRGRDDLETLFASKNYKDWIKISEMFLGPAPPG 623
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 624 FKFQPKHKSNSYE 636
>gi|448088717|ref|XP_004196614.1| Piso0_003836 [Millerozyma farinosa CBS 7064]
gi|448092873|ref|XP_004197645.1| Piso0_003836 [Millerozyma farinosa CBS 7064]
gi|359378036|emb|CCE84295.1| Piso0_003836 [Millerozyma farinosa CBS 7064]
gi|359379067|emb|CCE83264.1| Piso0_003836 [Millerozyma farinosa CBS 7064]
Length = 624
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S++ER D+L ++ ++ LEHWGSD GV RRF+ E
Sbjct: 489 MVARGALIKPWIFEEVEAQQYLDKSASERLDMLGKFASFALEHWGSDEYGVGLARRFMCE 548
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE K+NQRPP++ GRNELETL+ SS+ DW+KI+EM LGK +
Sbjct: 549 FLSFTHRYIPVGILERLPPKINQRPPIWKGRNELETLLGSSDYKDWVKITEMFLGKTGSN 608
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 609 FHFTPKHKSNAYE 621
>gi|310790042|gb|EFQ25575.1| dihydrouridine synthase [Glomerella graminicola M1.001]
Length = 767
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D S+ ER ++++ +G+E WG+D G+ TRRFLLE
Sbjct: 632 MIGRGALVKPWLFEEIEKGQYLDKSATERLAYVEKFCRFGMEAWGTDELGLGFTRRFLLE 691
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N RPP YHGRN+LETL+ S N DWIKISEM LG
Sbjct: 692 WLSFAHRYVPIGLLEYLPPNLNDRPPAYHGRNDLETLLASKNYRDWIKISEMYLGPAHPN 751
Query: 120 FSFLPKHKANSWK 132
F+F PKHK++S++
Sbjct: 752 FTFQPKHKSHSYE 764
>gi|336363799|gb|EGN92171.1| hypothetical protein SERLA73DRAFT_127726 [Serpula lacrymans var.
lacrymans S7.3]
Length = 646
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF EIKE++ +DISS ER +++ +Y YGL H+G+DT GV TTRR+L E
Sbjct: 509 MVGRGALIKPWIFTEIKERREWDISSRERLELIGKYAEYGLSHFGTDTAGVNTTRRYLCE 568
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE ++N RPP + GR+ELETL+ S + DW+KISEM LG P
Sbjct: 569 ALSFHYRYVPIGLLERLPGRINDRPPAFKGRDELETLLASGDSRDWVKISEMFLGPAPEL 628
Query: 120 FSFLPKHKANS 130
+SF PKHK+N+
Sbjct: 629 WSFTPKHKSNA 639
>gi|336385499|gb|EGO26646.1| hypothetical protein SERLADRAFT_347999 [Serpula lacrymans var.
lacrymans S7.9]
Length = 651
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF EIKE++ +DISS ER +++ +Y YGL H+G+DT GV TTRR+L E
Sbjct: 514 MVGRGALIKPWIFTEIKERREWDISSRERLELIGKYAEYGLSHFGTDTAGVNTTRRYLCE 573
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE ++N RPP + GR+ELETL+ S + DW+KISEM LG P
Sbjct: 574 ALSFHYRYVPIGLLERLPGRINDRPPAFKGRDELETLLASGDSRDWVKISEMFLGPAPEL 633
Query: 120 FSFLPKHKANS 130
+SF PKHK+N+
Sbjct: 634 WSFTPKHKSNA 644
>gi|255941804|ref|XP_002561671.1| Pc16g13720 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586294|emb|CAP94042.1| Pc16g13720 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 729
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 76/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D S+ ER ++++ YGL+ WGSD GV TTRRFLLE
Sbjct: 594 MVARGALIKPWIFEEIQTGQYLDKSATERLAYIEKFAKYGLQAWGSDEHGVGTTRRFLLE 653
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+GLLE + RPP + GRNELETLM S N DWIKI+EM LG P
Sbjct: 654 WLSFAYRYVPIGLLEYLPPNIQDRPPAWRGRNELETLMGSGNYKDWIKITEMFLGPAPDT 713
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 714 FKFEPKHKSNAYE 726
>gi|378729948|gb|EHY56407.1| tRNA-dihydrouridine synthase 3 [Exophiala dermatitidis NIH/UT8656]
Length = 788
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 80/132 (60%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M RGALIKPW+F+EIK + D SS+ER +++++ YGLE WGSD GV TTRRFLLE
Sbjct: 651 MAARGALIKPWLFEEIKAGQYLDKSSSERLRLVEQFCRYGLEAWGSDEMGVGTTRRFLLE 710
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVGLLE + RPP Y GR+ELETLM S N DWIKISEM LG
Sbjct: 711 WLSFACRYVPVGLLEYLPPNIQDRPPRYKGRDELETLMASDNYKDWIKISEMFLGPAHPN 770
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 771 FRFEPKHKSNSY 782
>gi|402221544|gb|EJU01613.1| FMN-linked oxidoreductase [Dacryopinax sp. DJM-731 SS1]
Length = 685
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 75/131 (57%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DISS ER DI+++ YGL HWG+DT GV T RR++ E
Sbjct: 548 MVARGALIKPWIFTEIKERREWDISSRERLDIVRQLCEYGLTHWGTDTAGVNTVRRYVCE 607
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+G+LE K+N+R P YHGR+ELETL+ S++ + W++IS M LG P
Sbjct: 608 ALSFQHRYIPIGVLERPIGKLNERAPAYHGRDELETLLASTDSNKWVEISSMFLGPPPDQ 667
Query: 120 FSFLPKHKANS 130
+ F PKH++NS
Sbjct: 668 WKFEPKHRSNS 678
>gi|168049709|ref|XP_001777304.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671280|gb|EDQ57834.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 110/132 (83%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DI++ ER +IL++YV +GL HWGSD++GVETTR FLLE
Sbjct: 129 MIARGALIKPWLFTEIKEQRHWDITAEERLNILRDYVKFGLIHWGSDSKGVETTRHFLLE 188
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ HRYIPVGLL+ QK+N RPP Y GRN+LETLM S + +DW++++EM+LG P G
Sbjct: 189 WLSYAHRYIPVGLLDVIPQKLNWRPPNYFGRNDLETLMASDSAADWVRLTEMVLGPPPPG 248
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 249 FAFAPKHKSNAY 260
>gi|126135514|ref|XP_001384281.1| dihydrouridine synthase of tRNA [Scheffersomyces stipitis CBS 6054]
gi|187471049|sp|A3LUK5.1|DUS3_PICST RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|126091479|gb|ABN66252.1| dihydrouridine synthase of tRNA [Scheffersomyces stipitis CBS 6054]
Length = 613
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D ++ ER DILK + +Y LEHWG+D GV RRF+ E
Sbjct: 478 MVARGALIKPWIFEEVEAQQYLDKTATERLDILKTFSDYALEHWGTDEYGVGLARRFMCE 537
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIP+G+LE K+N+RPP + GRNE+ETL+ S++ DWIKI+EM LGK
Sbjct: 538 FLSFTHRYIPLGILERLPPKINERPPQWKGRNEMETLLGSTDYKDWIKITEMFLGKSGDD 597
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 598 FVFTPKHKSNSYE 610
>gi|149247657|ref|XP_001528237.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|187471054|sp|A5DTS1.1|DUS3_LODEL RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|146448191|gb|EDK42579.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 642
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS ER +L++Y Y +EHWGSD GV RRF+ E
Sbjct: 509 MVARGALIKPWIFEEVEAQQYLDKSSTERLAMLEKYAKYAVEHWGSDEYGVSNARRFMCE 568
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+PVG+LE K+N+RPP + GRN+LETL+ SS+ DWIKI+EM LGK
Sbjct: 569 FLSFTHRYVPVGILERLPAKLNERPPKWIGRNDLETLLGSSDYKDWIKITEMFLGKAGDD 628
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+NS++
Sbjct: 629 FLFIPKHKSNSYE 641
>gi|350638673|gb|EHA27029.1| hypothetical protein ASPNIDRAFT_46331 [Aspergillus niger ATCC 1015]
Length = 742
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRG LIKPW+F+EI+ + D S+ ER +++++ YGLE WGSD GV TTRRFL+E
Sbjct: 606 MLGRGPLIKPWLFEEIQAGQYLDKSATERLAMIEKFCKYGLEAWGSDEHGVGTTRRFLME 665
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE +N RPP + GRNELETL+ S+N DW+KISEM LG
Sbjct: 666 WLSFTRRYVPIGLLEHLPPYINDRPPAFRGRNELETLLASANYKDWLKISEMFLGPAHKD 725
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 726 FKFEPKHKSNSY 737
>gi|258563178|ref|XP_002582334.1| potential tRNA dihydrouridine synthase [Uncinocarpus reesii 1704]
gi|237907841|gb|EEP82242.1| potential tRNA dihydrouridine synthase [Uncinocarpus reesii 1704]
Length = 726
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ + D S++ER +++++ YGL+ WGSD GV TTRRFLLE
Sbjct: 591 MIARGALMKPWIFEEIQAGQYLDKSASERLALVEKFARYGLDAWGSDEHGVGTTRRFLLE 650
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIP+GLLE + RPP Y GRNELETL+ S N DWIKISEM LG
Sbjct: 651 YLSFTHRYIPIGLLEHLPPNIQDRPPAYQGRNELETLLASDNYKDWIKISEMFLGPAHKD 710
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 711 FKFEPKHKSNSYE 723
>gi|358370106|dbj|GAA86718.1| tRNA dihydrouridine synthase [Aspergillus kawachii IFO 4308]
Length = 747
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRG LIKPW+F+EI+ + D S+ ER +++++ YGLE WGSD GV TTRRFL+E
Sbjct: 611 MLGRGPLIKPWLFEEIQAGQYLDKSATERLAMIEKFCKYGLEAWGSDEHGVGTTRRFLME 670
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE +N RPP + GRNELETL+ S+N DW+KISEM LG
Sbjct: 671 WLSFTRRYVPIGLLEHLPPYINDRPPAFRGRNELETLLASANYKDWLKISEMFLGPAHKD 730
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 731 FKFEPKHKSNSY 742
>gi|145230842|ref|XP_001389685.1| tRNA-dihydrouridine synthase 3 [Aspergillus niger CBS 513.88]
gi|187471046|sp|A2QAU6.1|DUS3_ASPNC RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|134055808|emb|CAK37330.1| unnamed protein product [Aspergillus niger]
Length = 748
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRG LIKPW+F+EI+ + D S+ ER +++++ YGLE WGSD GV TTRRFL+E
Sbjct: 612 MLGRGPLIKPWLFEEIQAGQYLDKSATERLAMIEKFCKYGLEAWGSDEHGVGTTRRFLME 671
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE +N RPP + GRNELETL+ S+N DW+KISEM LG
Sbjct: 672 WLSFTRRYVPIGLLEHLPPYINDRPPAFRGRNELETLLASANYKDWLKISEMFLGPAHKD 731
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 732 FKFEPKHKSNSY 743
>gi|254579020|ref|XP_002495496.1| ZYRO0B12716p [Zygosaccharomyces rouxii]
gi|238938386|emb|CAR26563.1| ZYRO0B12716p [Zygosaccharomyces rouxii]
Length = 645
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/132 (54%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D SS ER DILK+Y+ + LEHWGSD GV +RRF E
Sbjct: 514 MVARGALIKPWIFEEVDAQQHLDKSSTERMDILKDYIQFALEHWGSDEYGVAQSRRFFCE 573
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E ++N+RPP + GR+E+ET++ S + SDWIK+SEM LGK
Sbjct: 574 FMSFFHRYIPMGICEKYPVQLNERPPNWKGRDEMETMLASPDASDWIKLSEMFLGKAEEN 633
Query: 120 FSFLPKHKANSW 131
F F PKHK++S+
Sbjct: 634 FVFTPKHKSSSY 645
>gi|303317776|ref|XP_003068890.1| hypothetical protein CPC735_009210 [Coccidioides posadasii C735
delta SOWgp]
gi|240108571|gb|EER26745.1| hypothetical protein CPC735_009210 [Coccidioides posadasii C735
delta SOWgp]
Length = 724
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ + D S++ER I++++ YGL+ WGSD GV TTRRFLLE
Sbjct: 589 MIARGALMKPWIFEEIQAGQYLDKSASERLSIVEKFAKYGLDAWGSDEHGVGTTRRFLLE 648
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE ++ RPP Y GRNELETL+ S N DWIKISEM LG
Sbjct: 649 LLSFTHRYIPIGLLEYLPPRIQDRPPAYKGRNELETLLASDNYKDWIKISEMFLGPAHKD 708
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 709 FKFEPKHKSNSYE 721
>gi|449491950|ref|XP_004174700.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Taeniopygia guttata]
Length = 229
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS+ERF+ILK++ NYGLEHWGSDT+GVE TR+FLLE
Sbjct: 120 MIARGALIKPWLFTEIKEQRHWDISSSERFEILKDFTNYGLEHWGSDTQGVEKTRKFLLE 179
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N DWIKI
Sbjct: 180 WLSFLCRYIPVGLLEHLPQKINERPPYYLGRDYLETLMASQNVDDWIKI 228
>gi|19115484|ref|NP_594572.1| tRNA dihydrouridine synthase Dus3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74638894|sp|Q9UTH9.1|DUS3_SCHPO RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|6013094|emb|CAB57402.1| tRNA dihydrouridine synthase Dus3 (predicted) [Schizosaccharomyces
pombe]
Length = 617
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ ++ D SS +R ++L++Y N GLE+WGSD++GV TTRRF LE
Sbjct: 481 MIARGALVKPWIFEEIEARQFIDKSSTQRLEMLEQYCNNGLEYWGSDSQGVNTTRRFFLE 540
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY P+ L E + ++N RPP+Y R+E+ETL+ S+ +DW+K+SE LG P
Sbjct: 541 FMSFFHRYTPIALYEVQRPRLNDRPPLYTARDEMETLLASNKVTDWVKLSEFFLGPTPER 600
Query: 120 FSFLPKHKANS 130
F+F PKHK+NS
Sbjct: 601 FTFTPKHKSNS 611
>gi|380480397|emb|CCF42457.1| dihydrouridine synthase [Colletotrichum higginsianum]
Length = 772
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/133 (54%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGAL+KPW+F+EI++ + D S+ ER ++++ +G+E WG+D G+ TRRFLLE
Sbjct: 637 MVGRGALVKPWLFEEIEKGQYLDKSATERLAYVEKFCRFGMEAWGTDELGIGFTRRFLLE 696
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N RPP YHGRN+LETL+ S N DWIKISEM LG
Sbjct: 697 WLSFAHRYVPLGLLEHLPPDLNDRPPAYHGRNDLETLLASKNYRDWIKISEMYLGPAHPN 756
Query: 120 FSFLPKHKANSWK 132
F+F PKHK+++++
Sbjct: 757 FNFQPKHKSHAYE 769
>gi|430813475|emb|CCJ29186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 650
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF+EI+ KK D +S++R DIL+++ YGL++WGSD GV TTRRFL E
Sbjct: 512 MIARGALIKPWIFEEIESKKYIDKTSSQRLDILRQFCEYGLDYWGSDDFGVNTTRRFLCE 571
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+PV +LE + RP + GRNELETL+ S N DW+KISEM LGK+
Sbjct: 572 FLSFFHRYVPVTMLEVLPPNIQDRPLAWQGRNELETLLASENSEDWVKISEMFLGKVKDN 631
Query: 120 -FSFLPKHKANSWK 132
F F+PKHK+NS++
Sbjct: 632 TFKFIPKHKSNSYE 645
>gi|68466823|ref|XP_722607.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|68467102|ref|XP_722466.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|74587613|sp|Q5ALL3.1|DUS3_CANAL RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|46444444|gb|EAL03719.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|46444594|gb|EAL03868.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
Length = 613
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS+ER DIL ++ Y +EHWGSD GV +RRF+ E
Sbjct: 479 MVARGALIKPWIFEEVEAQQYLDKSSSERLDILGKFAKYAIEHWGSDEYGVGLSRRFMCE 538
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG++E K+N+RPP + GRN+LETL+ S++ DWIKI+EM LGK
Sbjct: 539 FLSFTHRYIPVGIMERLPPKLNERPPKWVGRNDLETLLASTDYKDWIKITEMFLGKATDD 598
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 599 FQFTPKHKSNAYE 611
>gi|407925143|gb|EKG18162.1| Zinc finger CCCH-type protein [Macrophomina phaseolina MS6]
Length = 765
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI++++ D S+ER ++++V YGLE WGSD GV TTRRFLLE
Sbjct: 628 MVARGALIKPWIFEEIEKEQYLDKRSSERLAYIEKFVKYGLETWGSDEMGVGTTRRFLLE 687
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY P+GLLE + R P + GR+++ETL++S N DWIKISEM LGK P
Sbjct: 688 WLSFTCRYTPIGLLEHLPPNIQDRAPAFKGRDDMETLLSSDNYKDWIKISEMFLGKAPET 747
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 748 FKFTPKHKSNAYE 760
>gi|119186423|ref|XP_001243818.1| hypothetical protein CIMG_03259 [Coccidioides immitis RS]
gi|121927069|sp|Q1E2F4.1|DUS3_COCIM RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|392870534|gb|EJB12038.1| tRNA-dihydrouridine synthase 3 [Coccidioides immitis RS]
Length = 724
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ + D S++ER I++++ YGL WGSD GV TTRRFLLE
Sbjct: 589 MIARGALMKPWIFEEIQAGQYLDKSASERLSIVEKFAKYGLNAWGSDEHGVGTTRRFLLE 648
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE ++ RPP Y GRNELETL+ S N DWIKISEM LG
Sbjct: 649 LLSFTHRYIPIGLLEHLPPRIQDRPPAYKGRNELETLLASDNYKDWIKISEMFLGPAHKD 708
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 709 FKFEPKHKSNSYE 721
>gi|154321557|ref|XP_001560094.1| hypothetical protein BC1G_01653 [Botryotinia fuckeliana B05.10]
gi|187471047|sp|A6RMI1.1|DUS3_BOTFB RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|347831030|emb|CCD46727.1| similar to tRNA-dihydrouridine synthase 3 [Botryotinia fuckeliana]
Length = 750
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI++ ++ D S++ER + ++++ YGLE WGSD GV TRRFLLE
Sbjct: 613 MVARGALIKPWLFEEIEKGQVLDKSASERLEYVEKFTRYGLEAWGSDEIGVGQTRRFLLE 672
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P G+LE + RPP Y GRN+LETL+ S N DW+KISEM LG G
Sbjct: 673 WLSFAHRYVPAGILEHLPPSLQDRPPAYRGRNDLETLLASDNYMDWMKISEMFLGPAHEG 732
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 733 FKFQPKHKSNSYE 745
>gi|358056693|dbj|GAA97356.1| hypothetical protein E5Q_04034 [Mixia osmundae IAM 14324]
Length = 727
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/132 (56%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF E++E++ +DISS ER D +++ +GLEHWGSDT+GV TRRF+ E
Sbjct: 589 MVARGALIKPWIFTELRERRDWDISSRERLDGIRQLTEFGLEHWGSDTQGVNKTRRFVCE 648
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF RYIPVGLLE KM R Y GR++LETL++S + +DW++I+EM LGK
Sbjct: 649 SLSFQSRYIPVGLLEVLPPKMTDRAVAYRGRDDLETLLSSDSAADWVRITEMFLGKASES 708
Query: 120 FSFLPKHKANSW 131
+S+ PKHKAN++
Sbjct: 709 WSYTPKHKANAY 720
>gi|296418297|ref|XP_002838778.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634739|emb|CAZ82969.1| unnamed protein product [Tuber melanosporum]
Length = 689
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 76/128 (59%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI++ + D S+ ER D ++EYV YGLE WGSD GV TTRRFLLE
Sbjct: 553 MLARGALIKPWLFEEIQKGQYLDKSATERLDYIREYVRYGLECWGSDELGVATTRRFLLE 612
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+G+LE ++ RPP + GRNELE L+ S+ DWIKISEM LG P+
Sbjct: 613 WLSFGCRYVPIGILERLPPRIQDRPPPWKGRNELECLLGGSDYKDWIKISEMFLGPCPSD 672
Query: 120 FSFLPKHK 127
F F PKHK
Sbjct: 673 FHFTPKHK 680
>gi|308808596|ref|XP_003081608.1| tRNA-dihydrouridine synthase (ISS) [Ostreococcus tauri]
gi|116060073|emb|CAL56132.1| tRNA-dihydrouridine synthase (ISS) [Ostreococcus tauri]
Length = 639
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/134 (55%), Positives = 102/134 (76%), Gaps = 3/134 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGA+IKPW+ EIKE++ +DIS+ ER D+ K++V+YGLEHWGSD+ GVE TRR+LLE
Sbjct: 487 MIGRGAIIKPWLMTEIKEQRHWDISANERLDLFKDFVHYGLEHWGSDSVGVEKTRRYLLE 546
Query: 61 WLSFLHRYIPVGLLES--TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEML-LGKIP 117
W+S+ HRY+P+GLLE K++ RP Y GR++LET + S DW+++SE+ LGK
Sbjct: 547 WMSYTHRYVPIGLLEQNVVPKLHLRPMRYVGRSDLETKLASDKLEDWLELSELSGLGKPD 606
Query: 118 AGFSFLPKHKANSW 131
F F+PKH +NS+
Sbjct: 607 PSFRFVPKHASNSY 620
>gi|325090975|gb|EGC44285.1| tRNA-dihydrouridine synthase [Ajellomyces capsulatus H88]
Length = 741
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+EI++ + D S++ER +++++ YGLE WGSD GV TRRFLLE
Sbjct: 604 MVARGALVKPWIFEEIEKGQYLDKSASERLALVEKFAQYGLEAWGSDEYGVGNTRRFLLE 663
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 664 YLSFTHRYIPVGILEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 723
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 724 FKFEPKHKSNSYE 736
>gi|240274641|gb|EER38157.1| tRNA dihydrouridine synthase 3-like protein [Ajellomyces capsulatus
H143]
Length = 741
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+EI++ + D S++ER +++++ YGLE WGSD GV TRRFLLE
Sbjct: 604 MVARGALVKPWIFEEIEKGQYLDKSASERLALVEKFAQYGLEAWGSDEYGVGNTRRFLLE 663
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 664 YLSFTHRYIPVGILEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 723
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 724 FKFEPKHKSNSYE 736
>gi|451994606|gb|EMD87076.1| hypothetical protein COCHEDRAFT_1114296 [Cochliobolus
heterostrophus C5]
Length = 709
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M GRGALIKPW+F+EI++ + D S+ ER ++++ YGL+ WGSD G+ TTRRFLLE
Sbjct: 572 MAGRGALIKPWLFEEIEKGQYLDKSATERLSYIEKFTKYGLQTWGSDEMGIGTTRRFLLE 631
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE +N RPP + GRNELETLM S + DWIKISEM LG
Sbjct: 632 WLSFAHRYVPVGLLEHLPPHINDRPPRFRGRNELETLMASEHYKDWIKISEMFLGPAHEN 691
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 692 FKFEPKHKSNAYE 704
>gi|238882041|gb|EEQ45679.1| hypothetical protein CAWG_04010 [Candida albicans WO-1]
Length = 613
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS+ER DIL ++ Y +EHWGSD GV +RRF+ E
Sbjct: 479 MVARGALIKPWIFEEVEAQQYLDKSSSERLDILGKFAKYAIEHWGSDEYGVGLSRRFMCE 538
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG++E K+N+RPP + GRN LETL+ S++ DWIKI+EM LGK
Sbjct: 539 FLSFTHRYIPVGIMERLPPKLNERPPKWVGRNNLETLLASTDYKDWIKITEMFLGKATDD 598
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 599 FQFTPKHKSNAYE 611
>gi|344302898|gb|EGW33172.1| hypothetical protein SPAPADRAFT_60480 [Spathaspora passalidarum
NRRL Y-27907]
Length = 339
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ + D S++ER DILK Y ++ +EHWGSD GV RRF+ E
Sbjct: 204 MVARGALIKPWIFEEVEAGQYLDKSASERLDILKTYADFAIEHWGSDDYGVGLARRFMCE 263
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE K+N+RPP + GRN++ETL+ S++ DWIKI+E+ LGK
Sbjct: 264 FLSFTHRYIPVGILERLPPKINERPPKWMGRNDMETLLASTDYKDWIKITELFLGKAGED 323
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+N+++
Sbjct: 324 FQFIPKHKSNAYE 336
>gi|255724312|ref|XP_002547085.1| hypothetical protein CTRG_01391 [Candida tropicalis MYA-3404]
gi|240134976|gb|EER34530.1| hypothetical protein CTRG_01391 [Candida tropicalis MYA-3404]
Length = 619
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 70/133 (52%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS+ER D+L ++ Y +EHWGSD GV RR++ E
Sbjct: 485 MVARGALIKPWIFEEVEAQQYLDKSSSERLDMLGKFAKYAVEHWGSDEYGVGMARRYMCE 544
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+L F HRYIPVG++E K+N+RPP + GRNE+ET++ S++ DWIKI+EM LGK
Sbjct: 545 FLGFTHRYIPVGIMERLPPKLNERPPKWVGRNEMETMLASTDYKDWIKITEMFLGKASED 604
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+N+++
Sbjct: 605 FQFIPKHKSNAYE 617
>gi|451846485|gb|EMD59795.1| hypothetical protein COCSADRAFT_100973 [Cochliobolus sativus
ND90Pr]
Length = 711
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M GRGALIKPW+F+EI++ + D S+ ER ++++ YGL+ WGSD G+ TTRRFLLE
Sbjct: 574 MAGRGALIKPWLFEEIEQGQYLDKSATERLSYIEKFTKYGLQTWGSDEMGIGTTRRFLLE 633
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE +N RPP + GRNELETLM S + DWIKISEM LG
Sbjct: 634 WLSFAHRYVPVGLLEHLPPHINDRPPRFKGRNELETLMASEHYKDWIKISEMFLGPAHEH 693
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 694 FKFEPKHKSNAYE 706
>gi|154282833|ref|XP_001542212.1| hypothetical protein HCAG_02383 [Ajellomyces capsulatus NAm1]
gi|187471044|sp|A6QYC6.1|DUS3_AJECN RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|150410392|gb|EDN05780.1| hypothetical protein HCAG_02383 [Ajellomyces capsulatus NAm1]
Length = 741
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+EI++ + D S++ER +++++ YGLE WGSD GV TRRFLLE
Sbjct: 604 MVARGALVKPWIFEEIEKGQYLDKSASERLALVEKFARYGLEAWGSDEYGVGNTRRFLLE 663
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 664 YLSFTHRYIPVGILEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 723
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 724 FKFEPKHKSNSYE 736
>gi|221508413|gb|EEE34000.1| tRNA-dihydrouridine synthase, putative [Toxoplasma gondii VEG]
Length = 1220
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI R AL+KPW+F EI E+K++DIS++ER D+LK +V +GLEHWGSD+RGV TTRRFLLE
Sbjct: 1037 MIARAALVKPWVFTEISERKVWDISASERLDLLKRFVRFGLEHWGSDSRGVATTRRFLLE 1096
Query: 61 WLSFLHRYIPVGLLESTQKMNQ-RPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P E ++ Q RP + R+ LE ++ S + DWI IS +LLG P
Sbjct: 1097 LLSFQHRYVPPPFFEFLPQLLQWRPSPFVARSNLENMLASPSVKDWIDISSLLLGPPPED 1156
Query: 120 FSFLPKHKANSW 131
FSF+PKH +NS+
Sbjct: 1157 FSFVPKHASNSY 1168
>gi|221486656|gb|EEE24917.1| tRNA-dihydrouridine synthase, putative [Toxoplasma gondii GT1]
Length = 1220
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI R AL+KPW+F EI E+K++DIS++ER D+LK +V +GLEHWGSD+RGV TTRRFLLE
Sbjct: 1037 MIARAALVKPWVFTEISERKVWDISASERLDLLKRFVRFGLEHWGSDSRGVATTRRFLLE 1096
Query: 61 WLSFLHRYIPVGLLESTQKMNQ-RPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P E ++ Q RP + R+ LE ++ S + DWI IS +LLG P
Sbjct: 1097 LLSFQHRYVPPPFFEFLPQLLQWRPSPFVARSNLENMLASPSVKDWIDISSLLLGPPPED 1156
Query: 120 FSFLPKHKANSW 131
FSF+PKH +NS+
Sbjct: 1157 FSFVPKHASNSY 1168
>gi|237834267|ref|XP_002366431.1| hypothetical protein TGME49_028080 [Toxoplasma gondii ME49]
gi|211964095|gb|EEA99290.1| hypothetical protein TGME49_028080 [Toxoplasma gondii ME49]
Length = 1220
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI R AL+KPW+F EI E+K++DIS++ER D+LK +V +GLEHWGSD+RGV TTRRFLLE
Sbjct: 1037 MIARAALVKPWVFTEISERKVWDISASERLDLLKRFVRFGLEHWGSDSRGVATTRRFLLE 1096
Query: 61 WLSFLHRYIPVGLLESTQKMNQ-RPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P E ++ Q RP + R+ LE ++ S + DWI IS +LLG P
Sbjct: 1097 LLSFQHRYVPPPFFEFLPQLLQWRPSPFVARSNLENMLASPSVKDWIDISSLLLGPPPED 1156
Query: 120 FSFLPKHKANSW 131
FSF+PKH +NS+
Sbjct: 1157 FSFVPKHASNSY 1168
>gi|50420831|ref|XP_458956.1| DEHA2D11286p [Debaryomyces hansenii CBS767]
gi|74631711|sp|Q6BS64.1|DUS3_DEBHA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|49654623|emb|CAG87117.1| DEHA2D11286p [Debaryomyces hansenii CBS767]
Length = 622
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 72/133 (54%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS ER +++ +Y + +EHWGSD GV RRF+ E
Sbjct: 488 MVARGALIKPWIFEEVEAQQYLDKSSTERLEMIGQYAKFAIEHWGSDEYGVGLARRFMCE 547
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+L F HRYIPVG+LE K+NQRPP + GR+ELETL+ S++ DWIKI+EM LGK
Sbjct: 548 FLGFTHRYIPVGILERLPPKLNQRPPQWKGRDELETLLGSTDYKDWIKITEMFLGKAGPN 607
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+N+++
Sbjct: 608 FQFVPKHKSNAYE 620
>gi|330914420|ref|XP_003296632.1| hypothetical protein PTT_06777 [Pyrenophora teres f. teres 0-1]
gi|311331132|gb|EFQ95267.1| hypothetical protein PTT_06777 [Pyrenophora teres f. teres 0-1]
Length = 698
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI++ + D S++ER ++ + YGL+ WGSD G+ TTRRFLLE
Sbjct: 561 MVGRGALIKPWLFEEIEKGQYLDKSASERLTYIERFTKYGLQTWGSDEMGIGTTRRFLLE 620
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE + RPP + GRNELETLM S + DWIKISEM LG
Sbjct: 621 WLSFAHRYVPVGLLEHLPPNIQDRPPRFRGRNELETLMASEHYKDWIKISEMFLGPAHEN 680
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 681 FKFEPKHKSNAYE 693
>gi|295664322|ref|XP_002792713.1| tRNA-dihydrouridine synthase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278827|gb|EEH34393.1| tRNA-dihydrouridine synthase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 744
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EIK+ + D S+ ER +++++ YGLE WGSD G+ TRRFLLE
Sbjct: 607 MIARGALMKPWIFEEIKKGQYLDKSATERLALVEKFAKYGLEAWGSDEYGIGNTRRFLLE 666
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+L F HRYIPVGLLE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 667 YLCFTHRYIPVGLLEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 726
Query: 120 FSFLPKHKANSWK 132
F F PKHK NS++
Sbjct: 727 FQFEPKHKTNSYE 739
>gi|261189953|ref|XP_002621387.1| tRNA-dihydrouridine synthase 3 [Ajellomyces dermatitidis SLH14081]
gi|239591623|gb|EEQ74204.1| tRNA-dihydrouridine synthase 3 [Ajellomyces dermatitidis SLH14081]
Length = 737
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+E+++ + D S+ ER +++++ YGLE WGSD G+ TRRFLLE
Sbjct: 600 MVARGALMKPWIFEEVEKGQYLDKSATERLALVEKFAKYGLEAWGSDEYGIGNTRRFLLE 659
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVGLLE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 660 YLSFTHRYIPVGLLEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 719
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 720 FKFEPKHKSNSYE 732
>gi|241950946|ref|XP_002418195.1| tRNA-dihydrouridine synthase, putative [Candida dubliniensis CD36]
gi|223641534|emb|CAX43495.1| tRNA-dihydrouridine synthase, putative [Candida dubliniensis CD36]
Length = 613
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S++ER DIL ++ Y +EHWGSD GV +RRF+ E
Sbjct: 479 MVARGALIKPWIFEEVEAQQYLDKSASERLDILGKFAKYAIEHWGSDEYGVGLSRRFMCE 538
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG++E ++N+RPP + GRN+LETL+ S++ DWIKI+EM LGK
Sbjct: 539 FLSFTHRYIPVGIMERLPPRLNERPPKWVGRNDLETLLASTDYKDWIKITEMFLGKATDD 598
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 599 FQFTPKHKSNAYE 611
>gi|327357988|gb|EGE86845.1| tRNA-dihydrouridine synthase 3 [Ajellomyces dermatitidis ATCC
18188]
Length = 737
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+E+++ + D S+ ER +++++ YGLE WGSD G+ TRRFLLE
Sbjct: 600 MVARGALMKPWIFEEVEKGQYLDKSATERLALVEKFAKYGLEAWGSDEYGIGNTRRFLLE 659
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVGLLE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 660 YLSFTHRYIPVGLLEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 719
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 720 FKFEPKHKSNSYE 732
>gi|239612845|gb|EEQ89832.1| tRNA-dihydrouridine synthase 3 [Ajellomyces dermatitidis ER-3]
Length = 737
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+E+++ + D S+ ER +++++ YGLE WGSD G+ TRRFLLE
Sbjct: 600 MVARGALMKPWIFEEVEKGQYLDKSATERLALVEKFAKYGLEAWGSDEYGIGNTRRFLLE 659
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVGLLE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 660 YLSFTHRYIPVGLLEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 719
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 720 FKFEPKHKSNSYE 732
>gi|409047260|gb|EKM56739.1| hypothetical protein PHACADRAFT_194324 [Phanerochaete carnosa
HHB-10118-sp]
Length = 245
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE +DISS ER +++++Y YGL H+GSDT GV TTRR+L E
Sbjct: 107 MVARGALIKPWIFTEIKEHHEWDISSRERLELIRKYAEYGLSHFGSDTTGVNTTRRYLCE 166
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE ++N RPP + GR+ELETL+ SS+ DW+KISE+ LG P
Sbjct: 167 ALSFQYRYVPIGLLEVLPGRLNDRPPAFRGRDELETLLASSDSRDWVKISEIFLGPAPES 226
Query: 120 FSFLPKHKANS 130
+ F PKHK+N+
Sbjct: 227 WIFTPKHKSNA 237
>gi|406865469|gb|EKD18511.1| dihydrouridine synthase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 749
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D S++ER ++++V YGLE WGSD GV TRRFLLE
Sbjct: 612 MVARGALIKPWIFEEIETGQYLDKSASERLGYVEKFVRYGLEAWGSDEVGVGQTRRFLLE 671
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+G+L + RPP Y GR++LETL+ S N DWIKISEM LG
Sbjct: 672 WLSFAHRYVPIGILAHLPPSLQDRPPAYRGRDDLETLLASDNYLDWIKISEMFLGPSHKD 731
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 732 FKFQPKHKSNSYE 744
>gi|315043164|ref|XP_003170958.1| hypothetical protein MGYG_06949 [Arthroderma gypseum CBS 118893]
gi|311344747|gb|EFR03950.1| hypothetical protein MGYG_06949 [Arthroderma gypseum CBS 118893]
Length = 734
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D SS+ER ++ +V +GLE WGSD G+ TTRRFLLE
Sbjct: 598 MVARGALIKPWIFEEIQAGQYLDKSSSERLAYIERFVKHGLEAWGSDEHGIGTTRRFLLE 657
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVG+LE K+N RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 658 WLSFTCRYVPVGILEYLPPKINDRPPAWRGRDDLETLLSSDNYLDWIKISEMFLGPADKD 717
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 718 FKFTPKHKSNSY 729
>gi|326476902|gb|EGE00912.1| tRNA-dihydrouridine synthase [Trichophyton tonsurans CBS 112818]
gi|326481010|gb|EGE05020.1| tRNA-dihydrouridine synthase [Trichophyton equinum CBS 127.97]
Length = 755
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D SS+ER ++ +V +GLE WGSD G+ TTRRFLLE
Sbjct: 619 MVARGALIKPWIFEEIQAGQYLDKSSSERLAYIERFVKHGLEAWGSDEHGIGTTRRFLLE 678
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVG+LE K+N RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 679 WLSFTCRYVPVGILEYLPPKINDRPPAWRGRDDLETLLSSDNYLDWIKISEMFLGPADKD 738
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 739 FKFTPKHKSNSY 750
>gi|242778111|ref|XP_002479173.1| tRNA dihydrouridine synthase, putative [Talaromyces stipitatus ATCC
10500]
gi|218722792|gb|EED22210.1| tRNA dihydrouridine synthase, putative [Talaromyces stipitatus ATCC
10500]
Length = 712
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI+ + D S++ER +++++ YG+E+WGSD G+ TRRFLLE
Sbjct: 575 MIGRGALIKPWLFEEIQAGQYLDKSASERLALVEKFARYGMENWGSDEHGLGMTRRFLLE 634
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+G+LE ++ RPP + GRNELETL+ S N DWIKI++M LG
Sbjct: 635 WLSFAYRYVPIGMLEYLPPRIQDRPPAFKGRNELETLLASDNYKDWIKITDMFLGPAHPD 694
Query: 120 FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 695 FKFEPKHKSNAY 706
>gi|429853650|gb|ELA28710.1| tRNA dihydrouridine [Colletotrichum gloeosporioides Nara gc5]
Length = 766
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D S+ ER ++++ +G+E WG+D G+ TRRFLLE
Sbjct: 631 MIGRGALVKPWLFEEIEKGQYLDKSATERIAYVEKFCRFGMEAWGTDELGIGFTRRFLLE 690
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P+GLLE +N RPP YHGRN+LETL+ S N DWIKISEM LG
Sbjct: 691 WLSFAHRYVPLGLLEHLPPDLNDRPPAYHGRNDLETLLASKNYRDWIKISEMFLGPAHPN 750
Query: 120 FSFLPKHKANSWK 132
F+F PKHK+++++
Sbjct: 751 FTFQPKHKSHAYE 763
>gi|156054034|ref|XP_001592943.1| hypothetical protein SS1G_05865 [Sclerotinia sclerotiorum 1980]
gi|187471050|sp|A7EKL8.1|DUS3_SCLS1 RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|154703645|gb|EDO03384.1| hypothetical protein SS1G_05865 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 750
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI++ + D S++ER ++++ YGLE WGSD GV TRRFLLE
Sbjct: 613 MVARGALIKPWLFEEIEKGQTLDKSASERLQYIEKFARYGLEAWGSDEMGVGQTRRFLLE 672
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P G+LE + RPP Y GRN+LETL+ S N DW+KI EM LG G
Sbjct: 673 WLSFAHRYVPAGILEHLPPSLQDRPPAYRGRNDLETLLASDNYMDWMKICEMFLGPAHEG 732
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 733 FKFQPKHKSNSYE 745
>gi|302499860|ref|XP_003011925.1| hypothetical protein ARB_01907 [Arthroderma benhamiae CBS 112371]
gi|291175479|gb|EFE31285.1| hypothetical protein ARB_01907 [Arthroderma benhamiae CBS 112371]
Length = 911
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D SS+ER ++ +V +GLE WGSD G+ TTRRFLLE
Sbjct: 619 MVARGALIKPWIFEEIQAGQYLDKSSSERLAYIERFVKHGLEAWGSDEHGIGTTRRFLLE 678
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVG+LE K+N RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 679 WLSFTCRYVPVGILEYLPPKINDRPPAWRGRDDLETLLSSDNYLDWIKISEMFLGPADKD 738
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 739 FKFTPKHKSNSY 750
>gi|401409366|ref|XP_003884131.1| Dihydrouridine synthase, related [Neospora caninum Liverpool]
gi|325118549|emb|CBZ54100.1| Dihydrouridine synthase, related [Neospora caninum Liverpool]
Length = 1295
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI R ALIKPW+F EI E+K++DIS++ER ++LK +V +GLEHWGSD RGV TTRRFLLE
Sbjct: 1111 MIARAALIKPWVFTEISEQKVWDISASERLELLKRFVGFGLEHWGSDGRGVATTRRFLLE 1170
Query: 61 WLSFLHRYIPVGLLESTQKMNQ-RPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P E ++ Q RP + R++LE +M S + DWI +S +LLG P
Sbjct: 1171 LLSFQHRYVPPPFFEFLPQLLQWRPSPFVARSDLERMMASPSVKDWIDLSSLLLGAPPKD 1230
Query: 120 FSFLPKHKANSW 131
FSF+PKH +NS+
Sbjct: 1231 FSFVPKHASNSY 1242
>gi|302664204|ref|XP_003023736.1| hypothetical protein TRV_02123 [Trichophyton verrucosum HKI 0517]
gi|291187746|gb|EFE43118.1| hypothetical protein TRV_02123 [Trichophyton verrucosum HKI 0517]
Length = 957
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D SS+ER ++ +V +GLE WGSD G+ TTRRFLLE
Sbjct: 618 MVARGALIKPWIFEEIQAGQYLDKSSSERLAYIERFVKHGLEAWGSDEHGIGTTRRFLLE 677
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVG+LE K+N RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 678 WLSFTCRYVPVGILEYLPPKINDRPPAWRGRDDLETLLSSDNYLDWIKISEMFLGPADKD 737
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 738 FKFTPKHKSNSY 749
>gi|354546715|emb|CCE43447.1| hypothetical protein CPAR2_210910 [Candida parapsilosis]
Length = 615
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS+ER D+L + + +EHWGSD GV RRF+ E
Sbjct: 480 MVARGALIKPWIFEEVEAQQYLDKSSSERLDMLGNFSKFAIEHWGSDEYGVNIARRFMCE 539
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIPVG++E K+N+RPP + GRNE+ET + S++ DWIKI+EM LGK
Sbjct: 540 FISFTHRYIPVGIMERLPPKLNERPPTWVGRNEMETFLASTDYKDWIKITEMFLGKASDD 599
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+N+++
Sbjct: 600 FQFVPKHKSNAYE 612
>gi|119589549|gb|EAW69143.1| dihydrouridine synthase 3-like (S. cerevisiae), isoform CRA_b [Homo
sapiens]
Length = 192
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/109 (68%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 9 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 68
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+I
Sbjct: 69 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRI 117
>gi|296421752|ref|XP_002840428.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636644|emb|CAZ84619.1| unnamed protein product [Tuber melanosporum]
Length = 707
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI++ + D S+ ER D ++EYV YGLE WGSD GV TTRRFLLE
Sbjct: 571 MLARGALIKPWLFEEIQKGQYLDKSATERLDYIREYVRYGLECWGSDELGVATTRRFLLE 630
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+G+LE ++ RPP + GRNELE L+ S+ DWIKISEM LG P+
Sbjct: 631 WLSFGCRYVPIGILERLPPRIQDRPPPWKGRNELECLLGGSDYKDWIKISEMFLGPCPSD 690
Query: 120 FSFLPKHK 127
F F PKHK
Sbjct: 691 FHFTPKHK 698
>gi|448512965|ref|XP_003866850.1| transcription factor [Candida orthopsilosis Co 90-125]
gi|380351188|emb|CCG21411.1| transcription factor [Candida orthopsilosis Co 90-125]
Length = 616
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS+ER D++ ++ + +EHWGSD GV RRF+ E
Sbjct: 481 MVARGALIKPWIFEEVEAQQYLDKSSSERLDMMGKFAKFAIEHWGSDEYGVNIARRFMCE 540
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG++E K+N+RPP + GRNE+ET + S++ DWIK++EM LGK
Sbjct: 541 FLSFTHRYIPVGIMERLPPKLNERPPTWVGRNEMETFLASTDYRDWIKLTEMFLGKASDD 600
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+N+++
Sbjct: 601 FQFVPKHKSNAYE 613
>gi|328855959|gb|EGG05082.1| hypothetical protein MELLADRAFT_48857 [Melampsora larici-populina
98AG31]
Length = 448
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL KPWIF EIKE++ +DISS ER D + + ++GLEHWGSDT+GV TTRRFL E
Sbjct: 312 MIARGALTKPWIFTEIKERRDWDISSRERLDQIGKLASFGLEHWGSDTQGVNTTRRFLCE 371
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
L F +RY+PVGLLE ++N RP + GR+ELETL+ S + DW+KISE+ LG P
Sbjct: 372 SLGFQYRYVPVGLLERLPARINDRPYPFKGRDELETLLASGSSKDWVKISELFLGPTPID 431
Query: 120 FSFLPKHKANSWK 132
++F+PKHK+N+++
Sbjct: 432 WNFIPKHKSNAYE 444
>gi|449302771|gb|EMC98779.1| hypothetical protein BAUCODRAFT_58554, partial [Baudoinia
compniacensis UAMH 10762]
Length = 694
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF+EI + D S+AER ++++V GL +WGSD GV TRRFLLE
Sbjct: 557 MIARGALIKPWIFEEIAAGQYLDKSAAERLGYVQQFVRNGLGYWGSDEIGVGITRRFLLE 616
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVGLLE + RPP + GRNELETL+ S + DW+KISEM LG
Sbjct: 617 WLSFGCRYVPVGLLEYLPPRFGDRPPAFRGRNELETLLCSGDYRDWVKISEMFLGPAHKD 676
Query: 120 FSFLPKHKANSWK 132
F FLPKHK+NS++
Sbjct: 677 FKFLPKHKSNSYE 689
>gi|255714134|ref|XP_002553349.1| KLTH0D14696p [Lachancea thermotolerans]
gi|238934729|emb|CAR22911.1| KLTH0D14696p [Lachancea thermotolerans CBS 6340]
Length = 667
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 66/132 (50%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+E++ ++ D SSAER DILK+Y ++ ++HWG+D G+ +RRF E
Sbjct: 534 MVARGALVKPWIFEEVEAQQHLDKSSAERLDILKDYAHFAMDHWGTDEYGISQSRRFFCE 593
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR+E+ETL+ S++ +DWIK+SE+ GK
Sbjct: 594 FMSFFHRYVPMGICERYPVLLNERPPNWKGRDEMETLLGSTDVNDWIKLSELFFGKTDEN 653
Query: 120 FSFLPKHKANSW 131
F F+PKHK+NS+
Sbjct: 654 FVFMPKHKSNSY 665
>gi|212533435|ref|XP_002146874.1| tRNA dihydrouridine synthase, putative [Talaromyces marneffei ATCC
18224]
gi|210072238|gb|EEA26327.1| tRNA dihydrouridine synthase, putative [Talaromyces marneffei ATCC
18224]
Length = 716
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 71/132 (53%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI+ + D S++ER +++++ YG++ WGSD G+ TRRFLLE
Sbjct: 579 MIGRGALIKPWLFEEIQTGQYLDKSASERLSLVEKFARYGMDAWGSDEHGLGMTRRFLLE 638
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+PVG+LE ++ RPP + GRNELETL+ S N DWIKI++M LG
Sbjct: 639 WLSFAYRYVPVGMLEYLPPRIQDRPPAFRGRNELETLLASDNYKDWIKITDMFLGPAHPD 698
Query: 120 FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 699 FKFEPKHKSNAY 710
>gi|396481859|ref|XP_003841340.1| similar to tRNA-dihydrouridine synthase 3 [Leptosphaeria maculans
JN3]
gi|312217914|emb|CBX97861.1| similar to tRNA-dihydrouridine synthase 3 [Leptosphaeria maculans
JN3]
Length = 725
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI + D S+ ER ++++ YG++ WGSD +G+ TTRRF+LE
Sbjct: 588 MIGRGALIKPWIFEEITTNQYLDKSATERLAYIEKFAKYGMQTWGSDEQGIGTTRRFMLE 647
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVG+LE + RPP++ GRNELETL+ S + DWIK+SEM LG
Sbjct: 648 WLSFAHRYVPVGILEYLPPHIQDRPPIFKGRNELETLLASEHYKDWIKLSEMFLGPAHPN 707
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 708 FKFEPKHKSNAYE 720
>gi|327295134|ref|XP_003232262.1| tRNA-dihydrouridine synthase [Trichophyton rubrum CBS 118892]
gi|326465434|gb|EGD90887.1| tRNA-dihydrouridine synthase [Trichophyton rubrum CBS 118892]
Length = 755
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D SS+ER ++ V +GLE WGSD G+ TTRRFLLE
Sbjct: 619 MVARGALIKPWIFEEIQAGQYLDKSSSERLAYIERSVKHGLEAWGSDEHGIGTTRRFLLE 678
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVG+LE K+N RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 679 WLSFTCRYVPVGILEYLPPKINDRPPAWRGRDDLETLLSSDNYLDWIKISEMFLGPADKD 738
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 739 FKFTPKHKSNSY 750
>gi|296808361|ref|XP_002844519.1| tRNA-dihydrouridine synthase 3 [Arthroderma otae CBS 113480]
gi|238844002|gb|EEQ33664.1| tRNA-dihydrouridine synthase 3 [Arthroderma otae CBS 113480]
Length = 737
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ + D SS+ER ++ +V +GLE WGSD G+ TTRRFLLE
Sbjct: 600 MVARGALIKPWIFEEIQAGQYLDKSSSERLAYIERFVKHGLEAWGSDEHGIGTTRRFLLE 659
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVG+LE K+N RPP + GR+ELETL+ S + DWIKISEM LG
Sbjct: 660 WLSFTCRYVPVGILEYLPPKINDRPPAWRGRDELETLLASDHYLDWIKISEMFLGPADKD 719
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 720 FKFTPKHKSNSY 731
>gi|452844367|gb|EME46301.1| hypothetical protein DOTSEDRAFT_51822 [Dothistroma septosporum
NZE10]
Length = 755
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF+EI+ + D S+ ER D ++++ GLE+WGSD GV RRFLLE
Sbjct: 618 MIGRGALVKPWIFEEIQSNQYLDKSATERLDYIEKFCRNGLEYWGSDEIGVGNVRRFLLE 677
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE K RPP + GRNELETL++S N DWIKISEM LG
Sbjct: 678 WLSFSCRYVPIGLLEYLPPKFGDRPPAFIGRNELETLLSSGNYKDWIKISEMFLGPAHKD 737
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 738 FQFQPKHKSNSYE 750
>gi|345571095|gb|EGX53910.1| hypothetical protein AOL_s00004g569 [Arthrobotrys oligospora ATCC
24927]
Length = 682
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 72/132 (54%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+I RGAL+KPWIF+EI K+ D ++ ER ++++ YGL+ WGSD GV TRRFL E
Sbjct: 544 LIARGALMKPWIFEEIHAKQYLDKTATERLAYVEQFAKYGLDCWGSDEMGVNNTRRFLCE 603
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+PVGLLE ++ RPP + GRNELETL+ S + DW+KIS+M LGK
Sbjct: 604 YLSFTHRYVPVGLLEVLPPRIQDRPPRFKGRNELETLLASDDYRDWVKISDMFLGKAGED 663
Query: 120 FSFLPKHKANSW 131
F F+PKHK+NS+
Sbjct: 664 FKFVPKHKSNSY 675
>gi|225561539|gb|EEH09819.1| tRNA-dihydrouridine synthase 3-like protein [Ajellomyces capsulatus
G186AR]
Length = 741
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+EI++ + D S++ER +++++ YGLE WGSD GV TRRFLLE
Sbjct: 604 MVARGALVKPWIFEEIEKGQYLDKSASERLALVEKFARYGLEAWGSDEYGVGNTRRFLLE 663
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 664 YLSFTHRYIPVGILEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 723
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 724 FKFEPKHKSNSYE 736
>gi|70996182|ref|XP_752846.1| tRNA dihydrouridine synthase [Aspergillus fumigatus Af293]
gi|74672269|sp|Q4WRX4.1|DUS3_ASPFU RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|66850481|gb|EAL90808.1| tRNA dihydrouridine synthase, putative [Aspergillus fumigatus
Af293]
gi|159131599|gb|EDP56712.1| tRNA dihydrouridine synthase, putative [Aspergillus fumigatus
A1163]
Length = 726
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPW+F+EI+ + D S+ ER ++++Y YGL+ WGSD GV TTRRF+LE
Sbjct: 591 MVGRGAIIKPWVFEEIQAGQYLDKSATERLAMIEKYAKYGLDTWGSDEHGVGTTRRFMLE 650
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+GLLE + RPP + GRNELETL+ S N DWIKI+EM LG
Sbjct: 651 WLSFTYRYVPIGLLEYLPPHIQDRPPAWRGRNELETLLGSPNYKDWIKITEMFLGPAHKD 710
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 711 FKFEPKHKSNAYE 723
>gi|119494964|ref|XP_001264280.1| tRNA dihydrouridine synthase, putative [Neosartorya fischeri NRRL
181]
gi|187471056|sp|A1D1U0.1|DUS3_NEOFI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|119412442|gb|EAW22383.1| tRNA dihydrouridine synthase, putative [Neosartorya fischeri NRRL
181]
Length = 726
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPW+F+EI+ + D S+ ER ++++Y YGL+ WGSD GV TTRRF+LE
Sbjct: 591 MVGRGAIIKPWVFEEIQAGQYLDKSATERLAMVEKYAKYGLDTWGSDEHGVGTTRRFMLE 650
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+GLLE + RPP + GRNELETL+ S N DWIKI+EM LG
Sbjct: 651 WLSFTYRYVPIGLLEYLPPHIQDRPPAWRGRNELETLLGSPNYKDWIKITEMFLGPAHKD 710
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 711 FKFEPKHKSNAYE 723
>gi|213407258|ref|XP_002174400.1| tRNA dihydrouridine synthase Dus3 [Schizosaccharomyces japonicus
yFS275]
gi|212002447|gb|EEB08107.1| tRNA dihydrouridine synthase Dus3 [Schizosaccharomyces japonicus
yFS275]
Length = 617
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 67/132 (50%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ ++ D SS +R ++L+E+ N+GL +WG+D RG+ TTRRF LE
Sbjct: 480 MIARGALVKPWIFEEIEARQSIDKSSTQRLEMLQEFCNHGLSYWGADERGLNTTRRFFLE 539
Query: 61 WLSFLHRYIPVGLLES--TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPA 118
++SF HRY PV + E K+N+R P Y R+++E ++ S N +DWI +SE LG P
Sbjct: 540 FMSFFHRYTPVAMYEEGVNPKLNERAPAYKARDDMEAMLASPNVADWISLSERFLGPTPP 599
Query: 119 GFSFLPKHKANS 130
F+F PKHK+NS
Sbjct: 600 RFTFTPKHKSNS 611
>gi|320593462|gb|EFX05871.1| tRNA dihydrouridine synthase [Grosmannia clavigera kw1407]
Length = 752
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF+EI + D S++ER ++ + YG+E WG+D +G+ TTRRFLLE
Sbjct: 615 MIGRGALVKPWIFEEIAAGQYLDKSASERLAYIERFARYGMEAWGTDEQGLGTTRRFLLE 674
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF RY+PVGLLE ++ RPP Y RNELE L+ S N DWIKISEM LG
Sbjct: 675 HLSFTSRYVPVGLLEHLPPSLSDRPPAYRSRNELEGLLASRNYKDWIKISEMFLGPAHPD 734
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+NS++
Sbjct: 735 FRFVPKHKSNSYE 747
>gi|145351179|ref|XP_001419962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580195|gb|ABO98255.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 361
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 101/134 (75%), Gaps = 3/134 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGA+IKPW+ EIKE++ +DIS+ ER D+ K++ YGLEHWGSD+ GVE TRR+LLE
Sbjct: 226 MIGRGAIIKPWLMTEIKEQRHWDISANERLDLFKDFCQYGLEHWGSDSMGVEKTRRYLLE 285
Query: 61 WLSFLHRYIPVGLLES--TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEML-LGKIP 117
W+S+ HRY+P+GLLE K++ RP Y GR++LET + S DW+++SE+ LGK
Sbjct: 286 WMSYTHRYVPIGLLEQNVVPKLHLRPMRYVGRSDLETKLASDRLEDWLELSEICGLGKPD 345
Query: 118 AGFSFLPKHKANSW 131
A F F+PKH +NS+
Sbjct: 346 ASFKFVPKHASNSY 359
>gi|339249059|ref|XP_003373517.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970336|gb|EFV54297.1| conserved hypothetical protein [Trichinella spiralis]
Length = 747
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
+ RGALIKPWIF EI +++ +DI S+ER +ILK++V YGL HWGSD+ GV TRRFLLEW
Sbjct: 411 VARGALIKPWIFTEIIQQRHWDIRSSERLEILKKFVKYGLLHWGSDSTGVNCTRRFLLEW 470
Query: 62 LSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEML 112
LSFL RYIPVGLLE QKMN RPP Y GR++LETLM S SDWIKISEML
Sbjct: 471 LSFLCRYIPVGLLEYLPQKMNDRPPAYFGRDDLETLMASGKVSDWIKISEML 522
>gi|366998884|ref|XP_003684178.1| hypothetical protein TPHA_0B00720 [Tetrapisispora phaffii CBS 4417]
gi|357522474|emb|CCE61744.1| hypothetical protein TPHA_0B00720 [Tetrapisispora phaffii CBS 4417]
Length = 673
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI ++ D SS ER +ILK+Y + ++HWG+D G+ +RRF E
Sbjct: 539 MVARGALIKPWIFEEIDSQQYIDKSSTERLEILKDYAKFAMDHWGTDEYGISQSRRFFCE 598
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E K+N+RPP + GR++LETL+ +N DWIK+SE+ GK+
Sbjct: 599 FMSFFHRYIPMGICERFPVKLNERPPSWKGRDDLETLLGGTNVQDWIKVSELFFGKVDDS 658
Query: 120 FSFLPKHKANSW 131
F FLPKHK++S+
Sbjct: 659 FVFLPKHKSSSF 670
>gi|121701031|ref|XP_001268780.1| tRNA dihydrouridine synthase, putative [Aspergillus clavatus NRRL
1]
gi|187471045|sp|A1CNY3.1|DUS3_ASPCL RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|119396923|gb|EAW07354.1| tRNA dihydrouridine synthase, putative [Aspergillus clavatus NRRL
1]
Length = 728
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/133 (52%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPW+F+EI+ + D ++ ER ++++ YGL+ WGSD GV TTRRF+LE
Sbjct: 593 MVGRGAIIKPWVFEEIQTGQYLDKTATERLAYVEKFAKYGLDTWGSDEHGVGTTRRFMLE 652
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLL+ + RPP + GRNELETL+ S N DWIKI+EM LG
Sbjct: 653 WLSFTQRYVPIGLLDYLPPNIQDRPPAWRGRNELETLLGSPNYKDWIKITEMFLGPAHKD 712
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 713 FKFEPKHKSNAYE 725
>gi|367014121|ref|XP_003681560.1| hypothetical protein TDEL_0E01060 [Torulaspora delbrueckii]
gi|359749221|emb|CCE92349.1| hypothetical protein TDEL_0E01060 [Torulaspora delbrueckii]
Length = 637
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D +S+ER DILK+Y + +EHWG+D G+ RRF E
Sbjct: 503 MVARGALIKPWIFEEVDAQQHLDKTSSERLDILKDYAQFAMEHWGTDEYGISQCRRFFCE 562
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E +N+RPP + GR+ELET + S+N DWIK+SE+ GK
Sbjct: 563 FMSFFHRYIPMGICERFPVALNERPPNWRGRDELETQLGSTNVEDWIKLSELFFGKTDEN 622
Query: 120 FSFLPKHKANSW 131
F F+PKHK+NS+
Sbjct: 623 FVFMPKHKSNSY 634
>gi|453085972|gb|EMF14014.1| FMN-linked oxidoreductase [Mycosphaerella populorum SO2202]
Length = 725
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF+EI++ + D S++ER ++++ GL++WGSD GV TRRFLLE
Sbjct: 588 MIGRGALVKPWIFEEIEKNQDLDKSASERLAYIEKFCRNGLDYWGSDEIGVGNTRRFLLE 647
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE K RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 648 WLSFSCRYVPIGLLEYLPPKFGDRPPAFRGRSDLETLLSSGNYKDWIKISEMFLGPAHKD 707
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 708 FQFQPKHKSNSYE 720
>gi|170095681|ref|XP_001879061.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646365|gb|EDR10611.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 632
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/139 (52%), Positives = 100/139 (71%), Gaps = 8/139 (5%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKE-------YVNYGLEHWGSDTRGVET 53
M+GRGALIKPWIF EIKE++ +DIS+ ER ++++ Y YGL H+GSDT GV
Sbjct: 487 MVGRGALIKPWIFTEIKERREWDISARERLELIRNASGSALFYAEYGLNHFGSDTAGVNA 546
Query: 54 TRRFLLEWLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEML 112
TRR+L E LSF +RY+P+GLLE ++ R P + GR+ELETL++S + DW+K+SEM
Sbjct: 547 TRRYLCEALSFQYRYVPIGLLECLPGRIKDRAPAFCGRSELETLLSSPDSQDWVKVSEMF 606
Query: 113 LGKIPAGFSFLPKHKANSW 131
LG P +SF PKHK+N++
Sbjct: 607 LGPAPETWSFTPKHKSNAY 625
>gi|401840060|gb|EJT42982.1| DUS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 676
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D +S ER +ILK+Y + +EHWG+D G+ RRF E
Sbjct: 538 MVARGALIKPWIFEEVDSQQYLDKTSTERLEILKDYAQFSMEHWGTDEYGISLCRRFFCE 597
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR++LETLM S++ +DWIK+S+M GK
Sbjct: 598 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDDLETLMGSTDVNDWIKLSDMFFGKTDEN 657
Query: 120 FSFLPKHKANSW 131
F F+PKHK+NS+
Sbjct: 658 FVFVPKHKSNSY 669
>gi|365759250|gb|EHN01050.1| Dus3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 524
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D +S ER +ILK+Y + +EHWG+D G+ RRF E
Sbjct: 386 MVARGALIKPWIFEEVDSQQYLDKTSTERLEILKDYAQFSMEHWGTDEYGISLCRRFFCE 445
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR++LETLM S++ +DWIK+S+M GK
Sbjct: 446 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDDLETLMGSTDVNDWIKLSDMFFGKTDEN 505
Query: 120 FSFLPKHKANSW 131
F F+PKHK+NS+
Sbjct: 506 FVFVPKHKSNSY 517
>gi|226295293|gb|EEH50713.1| tRNA-dihydrouridine synthase [Paracoccidioides brasiliensis Pb18]
Length = 897
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI + + D S+ ER +++++V YGLE WGSD G+ TRRFLLE
Sbjct: 760 MIARGALMKPWIFEEISKGQYLDKSATERLALVEKFVKYGLEAWGSDEYGIGNTRRFLLE 819
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+L F HRYIPVGLLE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 820 YLCFTHRYIPVGLLEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 879
Query: 120 FSFLPKHKANSWK 132
F F PKHK NS++
Sbjct: 880 FQFEPKHKTNSYE 892
>gi|365764190|gb|EHN05715.1| Dus3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 668
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>gi|259148380|emb|CAY81627.1| Dus3p [Saccharomyces cerevisiae EC1118]
Length = 668
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>gi|406602284|emb|CCH46122.1| tRNA-dihydrouridine synthase [Wickerhamomyces ciferrii]
Length = 657
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF+EI+ ++ D S+ ER +I+++Y + +EHWG+D G+ +RRFL E
Sbjct: 520 MIARGALIKPWIFEEIESQQYLDKSATERLEIIQKYAQFAMEHWGTDEYGIALSRRFLCE 579
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIP G+LE K+N+RP + GRNELETL+ S++ DWIKISEM LG
Sbjct: 580 FLSFFHRYIPYGILEKYPVKLNERPEFWKGRNELETLLGSNDYKDWIKISEMFLGPAGEN 639
Query: 120 FSFLPKHKANSWK 132
F+F PKHK++S++
Sbjct: 640 FNFTPKHKSSSYE 652
>gi|398366123|ref|NP_013505.4| Dus3p [Saccharomyces cerevisiae S288c]
gi|187471052|sp|A7A1S5.1|DUS3_YEAS7 RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|187608869|sp|Q06053.2|DUS3_YEAST RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|151940921|gb|EDN59303.1| dihydrouridine synthase [Saccharomyces cerevisiae YJM789]
gi|285813805|tpg|DAA09701.1| TPA: Dus3p [Saccharomyces cerevisiae S288c]
gi|392297902|gb|EIW09001.1| Dus3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 668
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>gi|349580097|dbj|GAA25258.1| K7_Dus3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 668
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>gi|256269134|gb|EEU04469.1| Dus3p [Saccharomyces cerevisiae JAY291]
Length = 668
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>gi|207342739|gb|EDZ70408.1| YLR401Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 668
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>gi|67517075|ref|XP_658422.1| hypothetical protein AN0818.2 [Aspergillus nidulans FGSC A4]
gi|74598677|sp|Q5BF62.1|DUS3_EMENI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|40746492|gb|EAA65648.1| hypothetical protein AN0818.2 [Aspergillus nidulans FGSC A4]
gi|259488899|tpe|CBF88723.1| TPA: tRNA-dihydrouridine synthase 3 (EC 1.-.-.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BF62] [Aspergillus
nidulans FGSC A4]
Length = 714
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI+ + D S++ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 579 MVGRGALIKPWLFEEIQAGQYLDKSASERLAYVEKFARYGMETWGSDEYGIGITRRFLLE 638
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE K+N RPP + GRN++ETLM S + DWIKISEM LG
Sbjct: 639 WLSFACRYVPIGLLEYLPPKINDRPPYWRGRNDMETLMGSHDYRDWIKISEMFLGPAHKD 698
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 699 FKFEPKHKSNSY 710
>gi|322712093|gb|EFZ03666.1| tRNA-dihydrouridine synthase 3 [Metarhizium anisopliae ARSEF 23]
Length = 782
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 101/156 (64%), Gaps = 24/156 (15%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI++ + D S++ER ++++V YGL+ WGSD G+ TRRFLLE
Sbjct: 624 MIGRGALIKPWLFEEIQQGQYLDKSASERLTYIEKFVRYGLDAWGSDELGIGFTRRFLLE 683
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKIS---------- 109
WLSF HRY+PVGLLE +N RPP Y GRN+LETLM S N DWIKI+
Sbjct: 684 WLSFAHRYVPVGLLEVLPPSLNDRPPAYVGRNDLETLMASGNYKDWIKITYVFLIIIFNA 743
Query: 110 -------------EMLLGKIPAGFSFLPKHKANSWK 132
EM LG + GF F PKH++N+++
Sbjct: 744 WFPLVDVANSLHREMFLGPVHPGFEFQPKHRSNAYE 779
>gi|440638572|gb|ELR08491.1| hypothetical protein GMDG_00555 [Geomyces destructans 20631-21]
Length = 735
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI+ + D SS ER ++++ YGL+ WGSD GV TRRFLLE
Sbjct: 597 MLARGALIKPWLFEEIQAGQYIDKSSTERLAYIEKFARYGLDAWGSDEMGVGQTRRFLLE 656
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVG+LE + RPP Y R+++ETL+ S+N DWIKISEM LG
Sbjct: 657 WLSFAHRYVPVGILEHLPPSLQDRPPAYRSRDDMETLLASANYKDWIKISEMFLGPAHKD 716
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 717 FLFQPKHKSNSY 728
>gi|452983221|gb|EME82979.1| hypothetical protein MYCFIDRAFT_153683 [Pseudocercospora fijiensis
CIRAD86]
Length = 742
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D S+ ER ++++ +GLE+WG+D GV TRRFLLE
Sbjct: 605 MIGRGALVKPWVFEEIEKNQYLDKSATERLAYVEKFCRHGLEYWGADEIGVGNTRRFLLE 664
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE K RPP + GR++LETL++S N DWIKISEM LG
Sbjct: 665 WLSFSCRYVPIGLLEYLPPKFGDRPPAFRGRSDLETLLSSGNYKDWIKISEMFLGPAHKD 724
Query: 120 FSFLPKHKANSWK 132
F+F PKH++NS++
Sbjct: 725 FNFQPKHRSNSYE 737
>gi|431922346|gb|ELK19437.1| tRNA-dihydrouridine synthase 3-like protein [Pteropus alecto]
Length = 219
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER D+L+++ +GLEHWGSDT+GVE TRRFLLE
Sbjct: 81 MIARGALLKPWLFTEIKEQRHWDISSSERLDVLRDFTRFGLEHWGSDTQGVEKTRRFLLE 140
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+I
Sbjct: 141 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRI 189
>gi|156839540|ref|XP_001643460.1| hypothetical protein Kpol_483p21 [Vanderwaltozyma polyspora DSM
70294]
gi|187471051|sp|A7TQ73.1|DUS3_VANPO RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|156114071|gb|EDO15602.1| hypothetical protein Kpol_483p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 664
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+E+ ++ D SS ER +IL++Y + +EHWG+D G+ RRF E
Sbjct: 530 MVARGALIKPWVFEEVDAQQHLDKSSTERLEILRDYAQFSMEHWGTDEYGIAQCRRFFCE 589
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E ++N+RPP + GR++LETLM S++ DWIK+SEM GK+
Sbjct: 590 FMSFFHRYIPIGICERYPVQLNERPPNWVGRDDLETLMGSTDARDWIKLSEMFFGKVEES 649
Query: 120 FSFLPKHKANSW 131
F F PKHK++S+
Sbjct: 650 FVFTPKHKSSSF 661
>gi|50554001|ref|XP_504409.1| YALI0E26048p [Yarrowia lipolytica]
gi|74633334|sp|Q6C4K3.1|DUS3_YARLI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|49650278|emb|CAG80010.1| YALI0E26048p [Yarrowia lipolytica CLIB122]
Length = 622
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 68/132 (51%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S+ ER + +++ YGLEHWGSD GV TRR+L E
Sbjct: 486 MVARGALIKPWIFEEVESRQHIDKSATERLEYFQKFAQYGLEHWGSDQYGVNQTRRYLCE 545
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P G+LE KMN RP ++ GR+E+ETL+ SS+ DWIK++E LG +
Sbjct: 546 FMSFTHRYVPSGILEYLPAKMNDRPDLWKGRDEMETLLGSSDYRDWIKVTERFLGPVGDE 605
Query: 120 FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 606 FEFTPKHKSNAY 617
>gi|50294738|ref|XP_449780.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637232|sp|Q6FJ14.1|DUS3_CANGA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|49529094|emb|CAG62758.1| unnamed protein product [Candida glabrata]
Length = 640
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI ++ D +S+ER +ILK Y + ++HWG+D G+ RRF E
Sbjct: 508 MVARGALIKPWIFEEINAQQHLDKTSSERLEILKTYSKFAMDHWGTDEYGIALGRRFFCE 567
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIPVG+LE ++N+RPP++ GR+++ETL+ SS+ DWIK+SEM G
Sbjct: 568 FMSFFHRYIPVGILERVPVQLNERPPLWKGRDDMETLLGSSDVKDWIKLSEMFFGPTEDS 627
Query: 120 FSFLPKHKANSWK 132
F F PKHK++S+K
Sbjct: 628 FVFTPKHKSSSYK 640
>gi|365991082|ref|XP_003672370.1| hypothetical protein NDAI_0J02350 [Naumovozyma dairenensis CBS 421]
gi|343771145|emb|CCD27127.1| hypothetical protein NDAI_0J02350 [Naumovozyma dairenensis CBS 421]
Length = 664
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RG LIKPWIF+E+ ++ D SS ER DIL++Y + +EHWG+D GV +RR+ E
Sbjct: 531 MVARGCLIKPWIFEEVDAEQYIDKSSTERLDILRDYAQFAMEHWGTDEYGVSQSRRYFCE 590
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR+++ETLM S++ +DWIK+SE+ GK+
Sbjct: 591 FMSFFHRYVPMGICERYPVYLNERPPHWIGRDDMETLMGSTDSNDWIKLSELFFGKVEDN 650
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 651 FVFTPKHKSNSY 662
>gi|115492659|ref|XP_001210957.1| hypothetical protein ATEG_00871 [Aspergillus terreus NIH2624]
gi|121742521|sp|Q0CZL3.1|DUS3_ASPTN RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|114197817|gb|EAU39517.1| hypothetical protein ATEG_00871 [Aspergillus terreus NIH2624]
Length = 719
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI+ + D S++ER +++++ YGL+ WGSD GV TRRFLLE
Sbjct: 584 MIGRGALIKPWLFEEIQTGQYLDKSASERLSLVEKFAKYGLDTWGSDEYGVGITRRFLLE 643
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVGLLE + RPP + GRNE+ETL+ S + DWIKI+EM LG
Sbjct: 644 WLSFHRRYVPVGLLEYLPPNIQDRPPAWRGRNEMETLLASDHYKDWIKITEMFLGPAHKD 703
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 704 FKFEPKHKSNAYE 716
>gi|410075147|ref|XP_003955156.1| hypothetical protein KAFR_0A05860 [Kazachstania africana CBS 2517]
gi|372461738|emb|CCF56021.1| hypothetical protein KAFR_0A05860 [Kazachstania africana CBS 2517]
Length = 647
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/133 (49%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI+ ++ D + ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 511 MVARGALIKPWIFEEIESQQYLDKTPVERVDILRDYSRFAMEHWGTDEYGISQCRRFFCE 570
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E K+N+RPP + GR++ ETL+ S++ SDWIK+SE+ G +
Sbjct: 571 FMSFFHRYIPMGICERYPVKLNERPPNWIGRDDTETLLGSTDVSDWIKLSEVFFGPVDDS 630
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 631 FVFTPKHKSNSYQ 643
>gi|366997426|ref|XP_003678475.1| hypothetical protein NCAS_0J01580 [Naumovozyma castellii CBS 4309]
gi|342304347|emb|CCC72137.1| hypothetical protein NCAS_0J01580 [Naumovozyma castellii CBS 4309]
Length = 652
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RG LIKPW+F+E++ ++ D SS ER DILK+Y + +EHWG+D G+ +RR+ E
Sbjct: 517 MVARGCLIKPWMFEEVEAQQYLDKSSVERLDILKDYAQFAMEHWGTDMYGIAQSRRYFCE 576
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR+++ETLM S++ +DWIK+SE+ GK
Sbjct: 577 FMSFFHRYVPMGICERYPVYLNERPPHWVGRDDMETLMGSTDVNDWIKLSELFFGKTEEN 636
Query: 120 FSFLPKHKANSW 131
F F+PKHK+NS+
Sbjct: 637 FVFMPKHKSNSY 648
>gi|363750694|ref|XP_003645564.1| hypothetical protein Ecym_3254 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889198|gb|AET38747.1| Hypothetical protein Ecym_3254 [Eremothecium cymbalariae
DBVPG#7215]
Length = 673
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI ++ D SS+ER DILK+Y + ++HWG+D G+ RRF E
Sbjct: 542 MVARGALIKPWIFEEIDGQQYLDKSSSERLDILKDYAKFAMDHWGTDEYGISQCRRFFCE 601
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E ++N+RPP + GR++LET + S+ SDWIK+S++ GK
Sbjct: 602 FMSFFHRYVPMGICERYPIQLNERPPNWRGRDDLETWLGSTGVSDWIKLSDLFFGKANDK 661
Query: 120 FSFLPKHKANS 130
F F PKHK+NS
Sbjct: 662 FVFQPKHKSNS 672
>gi|50303455|ref|XP_451669.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74637047|sp|Q6CWM0.1|DUS3_KLULA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|49640801|emb|CAH02062.1| KLLA0B03069p [Kluyveromyces lactis]
Length = 665
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D SS ER +ILK+Y + ++HWG+D G+ RRF E
Sbjct: 531 MVARGALIKPWIFEEVDAQQYMDKSSKERLEILKDYCKFAMDHWGTDQYGISQCRRFFCE 590
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR++LETL+ S++ +DW+K+SEM GK+
Sbjct: 591 FMSFFHRYVPMGICERYPVLLNERPPNWKGRDDLETLLGSTDSNDWLKLSEMFFGKVNDE 650
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 651 FVFTPKHKSNSF 662
>gi|45190676|ref|NP_984930.1| AER070Cp [Ashbya gossypii ATCC 10895]
gi|74693589|sp|Q757E3.1|DUS3_ASHGO RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)];
AltName: Full=tRNA-dihydrouridine synthase 3
gi|44983655|gb|AAS52754.1| AER070Cp [Ashbya gossypii ATCC 10895]
Length = 647
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 63/132 (47%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D SS+ER +IL++Y + ++HWG+D G+ RR+ E
Sbjct: 511 MVARGALIKPWIFEEVDARQYIDKSSSERLEILRDYARFSMDHWGTDEYGIALCRRYFCE 570
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR++LETL+ S++ +DWIK+SE G P
Sbjct: 571 FMSFFHRYVPMGICERYPVLLNERPPNWRGRDDLETLLGSTDAADWIKLSEQFFGPTPDK 630
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 631 FVFQPKHKSNSY 642
>gi|374108153|gb|AEY97060.1| FAER070Cp [Ashbya gossypii FDAG1]
Length = 647
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 63/132 (47%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D SS+ER +IL++Y + ++HWG+D G+ RR+ E
Sbjct: 511 MVARGALIKPWIFEEVDARQYIDKSSSERLEILRDYARFSMDHWGTDEYGIALCRRYFCE 570
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR++LETL+ S++ +DWIK+SE G P
Sbjct: 571 FMSFFHRYVPMGICERYPVLLNERPPNWRGRDDLETLLGSTDAADWIKLSEQFFGPTPDK 630
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 631 FVFQPKHKSNSY 642
>gi|444323675|ref|XP_004182478.1| hypothetical protein TBLA_0I03030 [Tetrapisispora blattae CBS 6284]
gi|387515525|emb|CCH62959.1| hypothetical protein TBLA_0I03030 [Tetrapisispora blattae CBS 6284]
Length = 667
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 68/130 (52%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ R ALIKPWIF+EI ++ D SS+ER IL++Y ++ ++HWG+D G+ T+RR+ E
Sbjct: 536 MVARSALIKPWIFEEIDAQQHLDKSSSERLQILRDYADFAMQHWGTDEYGIATSRRYFCE 595
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+PVG+LE +MNQR + GR+ELETLM S + DWIK+SEM GK G
Sbjct: 596 FMSFFHRYVPVGVLERVPIRMNQRVEKWKGRDELETLMASEDSRDWIKLSEMFWGK-AEG 654
Query: 120 FSFLPKHKAN 129
F F+PKHK++
Sbjct: 655 FVFVPKHKSS 664
>gi|403214548|emb|CCK69049.1| hypothetical protein KNAG_0B06190 [Kazachstania naganishii CBS
8797]
Length = 646
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/132 (48%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI ++ D SS+ER + +++Y + +EHWG+D G+ RRF +
Sbjct: 514 MVARGALIKPWIFEEIDAEQYLDKSSSERVEYMRDYAQFAMEHWGTDEYGISQCRRFFCD 573
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E K+N+RPP + GR+ +ETL+ S++ SDW+K+SEM GK
Sbjct: 574 FMSFFHRYIPMGICERYPVKLNERPPNWQGRDPMETLLGSNDASDWVKLSEMFWGKPEDT 633
Query: 120 FSFLPKHKANSW 131
F + PKHK+NS+
Sbjct: 634 FHYTPKHKSNSY 645
>gi|307171073|gb|EFN63116.1| tRNA-dihydrouridine synthase 3-like [Camponotus floridanus]
Length = 592
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 90/132 (68%), Gaps = 33/132 (25%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWIF EIKE++L DISS ERFDILK
Sbjct: 493 IGRGALIKPWIFTEIKERRLIDISSTERFDILK--------------------------- 525
Query: 62 LSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
+Y+PVG+LE Q++N+RPP Y GR+++ETLM SSNC+DW+K+SEMLLGK+P GF
Sbjct: 526 -----KYVPVGILERPPQRINERPPFYRGRDDMETLMASSNCADWVKLSEMLLGKVPDGF 580
Query: 121 SFLPKHKANSWK 132
+FLPKHKANSWK
Sbjct: 581 NFLPKHKANSWK 592
>gi|302409896|ref|XP_003002782.1| tRNA-dihydrouridine synthase [Verticillium albo-atrum VaMs.102]
gi|261358815|gb|EEY21243.1| tRNA-dihydrouridine synthase [Verticillium albo-atrum VaMs.102]
Length = 466
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 11 WIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLSFLHRYIP 70
W+F+EI++ + D ++ ER ++++V YGLE WGSD G+ TRRFLLEW+SF HRY+P
Sbjct: 341 WLFEEIEKGQYLDKTATERLGYIEKFVRYGLEAWGSDELGIGFTRRFLLEWMSFTHRYVP 400
Query: 71 VGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSFLPKHKAN 129
+G+LE +N RPP + GRNE+ETL+ S+N DWIKISEM LG GF+F PKHK+N
Sbjct: 401 LGILEHLPPSLNDRPPAFRGRNEMETLLASNNYKDWIKISEMYLGPCHPGFTFQPKHKSN 460
Query: 130 SWK 132
+++
Sbjct: 461 AYE 463
>gi|428167331|gb|EKX36292.1| hypothetical protein GUITHDRAFT_158684 [Guillardia theta CCMP2712]
Length = 343
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+E+KE+K +DI S+ER +++K++V +GL+HWGSD+ GVE TR F LE
Sbjct: 222 MIGRGALIKPWIFKEVKERKYWDIRSSERLEMMKDFVRFGLDHWGSDSVGVEKTRSFFLE 281
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIP 117
W ++ RYIPVGLLE +N R P + GR+ELET + S+ DWIK+SEM LG P
Sbjct: 282 WQAWHCRYIPVGLLEILPPVINHRNPGFTGRDELETKLASTQADDWIKLSEMFLGPAP 339
>gi|327288843|ref|XP_003229134.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Anolis
carolinensis]
Length = 624
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPWIF EIKE + +DIS+ ER D+LKE+ +YGLE+WG+DT GVE TR L++
Sbjct: 465 MIGRGALVKPWIFTEIKEMRHWDISAQERLDMLKEFTDYGLEYWGTDTNGVEKTRAALVQ 524
Query: 61 WLSFLHRYIPVGLLE-STQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WL FL RYIPV LLE K +PP + LE LM+S D +KISEM LG + +
Sbjct: 525 WLQFLSRYIPVALLEHQPPKFGNKPPNSLSGDYLEVLMSSRKTKDMVKISEMFLGPVSSD 584
Query: 120 FSF 122
F+F
Sbjct: 585 FNF 587
>gi|320038928|gb|EFW20863.1| dihydrouridine synthase [Coccidioides posadasii str. Silveira]
Length = 698
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ + D S++ER I++++ YGL+ WGSD GV TTRRFLLE
Sbjct: 589 MIARGALMKPWIFEEIQAGQYLDKSASERLSIVEKFAKYGLDAWGSDEHGVGTTRRFLLE 648
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
LSF HRYIP+GLLE ++ RPP Y GRNELETL+ S N DWIKI
Sbjct: 649 LLSFTHRYIPIGLLEYLPPRIQDRPPAYKGRNELETLLASDNYKDWIKI 697
>gi|392870535|gb|EJB12039.1| tRNA-dihydrouridine synthase 3, variant [Coccidioides immitis RS]
Length = 698
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ + D S++ER I++++ YGL WGSD GV TTRRFLLE
Sbjct: 589 MIARGALMKPWIFEEIQAGQYLDKSASERLSIVEKFAKYGLNAWGSDEHGVGTTRRFLLE 648
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
LSF HRYIP+GLLE ++ RPP Y GRNELETL+ S N DWIKI
Sbjct: 649 LLSFTHRYIPIGLLEHLPPRIQDRPPAYKGRNELETLLASDNYKDWIKI 697
>gi|189196893|ref|XP_001934784.1| tRNA-dihydrouridine synthase B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980732|gb|EDU47358.1| tRNA-dihydrouridine synthase B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 643
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI++ + D S++ER ++++ YGL+ WGSD G+ TTRRFLLE
Sbjct: 534 MVGRGALIKPWLFEEIEKGQYLDKSASERLTYIEKFTKYGLQTWGSDEMGIGTTRRFLLE 593
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
WLSF HRY+PVGLLE + RPP + GRNELETLM S + DWIKI
Sbjct: 594 WLSFAHRYVPVGLLEHLPPNIQDRPPRFRGRNELETLMASEHYKDWIKI 642
>gi|225677569|gb|EEH15853.1| tRNA-dihydrouridine synthase B [Paracoccidioides brasiliensis Pb03]
Length = 795
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI + + D S+ ER +++++ YGLE WGSD G+ TRRFLLE
Sbjct: 607 MIARGALMKPWIFEEISKGQYLDKSATERLALVEKFAKYGLEAWGSDEYGIGNTRRFLLE 666
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLL 113
+L F HRYIPVGLLE + RPP + GRNELETL+ S N DWIKIS +L+
Sbjct: 667 YLCFTHRYIPVGLLEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISYILV 720
>gi|407041361|gb|EKE40687.1| dihydrouridine synthase (dus) protein [Entamoeba nuttalli P19]
Length = 515
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 93/133 (69%), Gaps = 8/133 (6%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWI+ EIKEK+ +DISS+ER DIL++Y GL HWGSD +G+ TR F+
Sbjct: 381 IGRGALIKPWIYTEIKEKRDWDISSSERLDILRQYALDGLSHWGSDAQGISKTREFMCHH 440
Query: 62 LSFLHRYIPV-GLLESTQKM-----NQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGK 115
L+F+ RY+PV +LE+ Q++ N R Y R+++E L+TS D+IKI+EM LG
Sbjct: 441 LTFMTRYVPVHCVLETNQEISIKVRNDRVMCY--RDDMEKLLTSDRLEDYIKITEMFLGP 498
Query: 116 IPAGFSFLPKHKA 128
P F ++PKH++
Sbjct: 499 APKDFVYVPKHQS 511
>gi|67471577|ref|XP_651736.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468508|gb|EAL46349.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 515
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 8/133 (6%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWI+ EIKEK+ +DISS+ER DIL++Y GL HWGSD +G+ TR F+
Sbjct: 381 IGRGALIKPWIYTEIKEKRDWDISSSERLDILRQYALDGLSHWGSDAQGISKTREFMCHH 440
Query: 62 LSFLHRYIPV-GLLESTQKM-----NQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGK 115
L+F+ RY+PV ++E+ Q++ N R Y R+++E L+TS D+IKI+EM LG
Sbjct: 441 LTFMTRYVPVHCVIETNQEISIKVRNDRVMCY--RDDMEKLLTSDRLEDYIKITEMFLGP 498
Query: 116 IPAGFSFLPKHKA 128
P F ++PKH++
Sbjct: 499 APKDFVYVPKHQS 511
>gi|449701838|gb|EMD42583.1| tRNA-dihydrouridine synthase, putative [Entamoeba histolytica KU27]
Length = 515
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 8/133 (6%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWI+ EIKEK+ +DISS+ER DIL++Y GL HWGSD +G+ TR F+
Sbjct: 381 IGRGALIKPWIYTEIKEKRDWDISSSERLDILRQYALDGLSHWGSDAQGISKTREFMCHH 440
Query: 62 LSFLHRYIPV-GLLESTQKM-----NQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGK 115
L+F+ RY+PV ++E+ Q++ N R Y R+++E L+TS D+IKI+EM LG
Sbjct: 441 LTFMTRYVPVHCVIETNQEISIKVRNDRVMCY--RDDMEKLLTSDRLEDYIKITEMFLGP 498
Query: 116 IPAGFSFLPKHKA 128
P F ++PKH++
Sbjct: 499 APKDFVYVPKHQS 511
>gi|167394491|ref|XP_001740985.1| tRNA-dihydrouridine synthase [Entamoeba dispar SAW760]
gi|165894630|gb|EDR22551.1| tRNA-dihydrouridine synthase, putative [Entamoeba dispar SAW760]
Length = 515
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 8/133 (6%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGALIKPWI+ EIKEK+ +DISS+ER DIL++Y GL HWGSD +G+ TR F+
Sbjct: 381 IGRGALIKPWIYTEIKEKRDWDISSSERLDILRQYALDGLSHWGSDAQGISKTREFMCHH 440
Query: 62 LSFLHRYIPV-GLLESTQKM-----NQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGK 115
L+F+ RY+PV ++E+ Q++ N R Y R+++E L+TS D+IKI+EM LG
Sbjct: 441 LTFMTRYVPVHCVIETNQEISIKVRNDRVMCY--RDDMEKLLTSDRLEDYIKITEMFLGP 498
Query: 116 IPAGFSFLPKHKA 128
P F ++PKH++
Sbjct: 499 APKEFVYVPKHQS 511
>gi|171695442|ref|XP_001912645.1| hypothetical protein [Podospora anserina S mat+]
gi|170947963|emb|CAP60127.1| unnamed protein product [Podospora anserina S mat+]
Length = 769
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGA+IKPWI++EI+ + D S+ ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 583 MIGRGAIIKPWIYEEIQTGQYLDKSATERLGYIEKFARYGMEAWGSDELGINYTRRFLLE 642
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKI 108
+LSF RY+PVGLLE +N+RPP Y GRNELETL+ S + DWIKI
Sbjct: 643 FLSFFSRYVPVGLLEYLPPSINERPPAYKGRNELETLLASKDYKDWIKI 691
>gi|345319255|ref|XP_003430119.1| PREDICTED: tRNA-dihydrouridine synthase 3 [Ornithorhynchus
anatinus]
Length = 621
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 67/132 (50%), Positives = 79/132 (59%), Gaps = 41/132 (31%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER +ILK++ +GLEHWGSDT+GVE TRRFLLE
Sbjct: 531 MIARGALIKPWLFTEIKEQRHWDISSGERLEILKDFTCFGLEHWGSDTQGVEKTRRFLLE 590
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSFL RY EMLLG +P F
Sbjct: 591 WLSFLCRY-----------------------------------------EMLLGPVPPAF 609
Query: 121 SFLPKHKANSWK 132
+FLPKHKANS+K
Sbjct: 610 TFLPKHKANSYK 621
>gi|147796368|emb|CAN77107.1| hypothetical protein VITISV_042167 [Vitis vinifera]
Length = 940
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 55/87 (63%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 46 SDTRGVETTRRFLLEWLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSD 104
+D GVETTR F+LEWLS+ +RY+PVGLL+ Q++N RPP Y GR++LETLM S + +D
Sbjct: 570 ADDGGVETTRHFMLEWLSYTYRYVPVGLLDVIPQQLNWRPPSYFGRDDLETLMASDSAAD 629
Query: 105 WIKISEMLLGKIPAGFSFLPKHKANSW 131
WI+ISEMLLGK+P GFSF PKHK+N++
Sbjct: 630 WIRISEMLLGKVPPGFSFAPKHKSNAY 656
>gi|443920613|gb|ELU40503.1| zinc finger dihydrouridine synthase [Rhizoctonia solani AG-1 IA]
Length = 667
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 86/134 (64%), Gaps = 17/134 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF + ++SA R + HWGSDT GV TRRFL E
Sbjct: 539 MVGRGALIKPWIFSGL-------VTSAIR------ETHESSSHWGSDTVGVNNTRRFLCE 585
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELE---TLMTSSNCSDWIKISEMLLGKI 116
LSF +RYIP+GLLE K+N+RPP Y GR+EL + S+ SDW++ISEM LG
Sbjct: 586 ALSFTYRYIPIGLLERLPGKINERPPAYRGRDELGEWCQVAPSNKSSDWVRISEMFLGPA 645
Query: 117 PAGFSFLPKHKANS 130
P G++F PKHK+N+
Sbjct: 646 PEGWTFTPKHKSNA 659
>gi|440290626|gb|ELP83991.1| tRNA-dihydrouridine synthase, putative [Entamoeba invadens IP1]
Length = 538
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 4/131 (3%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGAL+KPWIF EIKEK+ +DI+S+ER ++LK++ GL HWGSD++GV TTR F+
Sbjct: 404 IGRGALMKPWIFTEIKEKRNWDITSSERIEMLKQFAIDGLNHWGSDSKGVGTTREFMCHH 463
Query: 62 LSFLHRYIPVGLLESTQK-MNQRPPMYHG---RNELETLMTSSNCSDWIKISEMLLGKIP 117
L+F+ RY+PV L QK ++ G ++E+E L+ S + +KI+EM LG P
Sbjct: 464 LTFMSRYVPVHCLVDKQKEISIHSKFEEGMQYKDEMEELLASDKIENLVKITEMFLGPAP 523
Query: 118 AGFSFLPKHKA 128
+ F+PKH +
Sbjct: 524 KDYVFVPKHNS 534
>gi|3859982|gb|AAC72941.1| unknown [Homo sapiens]
Length = 223
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 142 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 201
Query: 61 WLSFLHRYIPVGLLEST-QKMN 81
WLSFL RY+PVGLLE Q++N
Sbjct: 202 WLSFLCRYVPVGLLERLPQRIN 223
>gi|444511966|gb|ELV10016.1| tRNA-dihydrouridine synthase 3-like protein [Tupaia chinensis]
Length = 618
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 62/128 (48%), Positives = 75/128 (58%), Gaps = 42/128 (32%)
Query: 5 GALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLSF 64
GAL+KPW+F EIKE++ +DISS ER DIL+++ +YGLEHWGSDT+GVE TRRFLLEWLSF
Sbjct: 533 GALLKPWLFTEIKEQRHWDISSLERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLEWLSF 592
Query: 65 LHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSFLP 124
L SEMLLG +P F FLP
Sbjct: 593 L------------------------------------------CSEMLLGPVPPNFVFLP 610
Query: 125 KHKANSWK 132
KHKAN++K
Sbjct: 611 KHKANAYK 618
>gi|426230677|ref|XP_004009391.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Ovis
aries]
Length = 612
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/68 (72%), Positives = 61/68 (89%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 525 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLE 584
Query: 61 WLSFLHRY 68
WLSFL R+
Sbjct: 585 WLSFLCRW 592
>gi|405947256|gb|EKC17796.1| tRNA-dihydrouridine synthase 3-like protein [Crassostrea gigas]
Length = 144
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 65/78 (83%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF E+KEK+ +DISS+ERFD++K +VN GLEHWGSDT+GVETTRRFLLE
Sbjct: 59 MVARGALIKPWIFTELKEKRHWDISSSERFDMMKRFVNNGLEHWGSDTQGVETTRRFLLE 118
Query: 61 WLSFLHRYIPVGLLESTQ 78
W SFL+R + E+ +
Sbjct: 119 WQSFLYRTVGAAAPENQR 136
>gi|345497475|ref|XP_001600195.2| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase 3-like
[Nasonia vitripennis]
Length = 573
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Query: 68 YIPVGLL-ESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSFLPKH 126
Y+PVG+L E Q+MN RPP Y GR++LETLM SSNC+DWIK+SEMLLGK+P GF+FLPKH
Sbjct: 508 YVPVGILVEPPQRMNNRPPYYRGRDDLETLMASSNCADWIKLSEMLLGKVPDGFNFLPKH 567
Query: 127 KANSWK 132
KAN+WK
Sbjct: 568 KANAWK 573
>gi|385302845|gb|EIF46953.1| dihydrouridine synthase [Dekkera bruxellensis AWRI1499]
Length = 195
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI ++ D +++ER I++ Y + L+HWGSD GV T RR++ E
Sbjct: 102 MIGRGALIKPWIFEEIDSQQYLDKTASERLSIIEXYSKFALDHWGSDEFGVNTARRYMCE 161
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPP 85
+LSF +RY+PVGLLE K+NQRPP
Sbjct: 162 FLSFTYRYVPVGLLERLPPKLNQRPP 187
>gi|452824786|gb|EME31786.1| tRNA-dihydrouridine synthase 3 [Galdieria sulphuraria]
Length = 508
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 60/68 (88%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF E+KE++ +DIS++ER +I++ + YGL+HWG+D +GVE TR+FLLE
Sbjct: 432 MIGRGALIKPWIFTELKEQRHWDISASERLEIIQTFAKYGLDHWGADKKGVERTRKFLLE 491
Query: 61 WLSFLHRY 68
WLSFLHRY
Sbjct: 492 WLSFLHRY 499
>gi|405955654|gb|EKC22686.1| tRNA-dihydrouridine synthase 3-like protein [Crassostrea gigas]
Length = 91
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 67 RYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGFSFLPK 125
YIPVGLLE QK+N+RPP Y GRN+LETLM+S NC DW+KISEMLLG +P GFSFLPK
Sbjct: 25 EYIPVGLLEQLPQKINERPPYYIGRNDLETLMSSPNCGDWVKISEMLLGPVPDGFSFLPK 84
Query: 126 HKANSWK 132
HKAN++K
Sbjct: 85 HKANAYK 91
>gi|342883360|gb|EGU83873.1| hypothetical protein FOXB_05587 [Fusarium oxysporum Fo5176]
Length = 670
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 57/71 (80%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI++ + D SS+ER ++++V YGL+ WGSD G+ TRRFLLE
Sbjct: 600 MIGRGALIKPWLFEEIEKGQYLDKSSSERLRYIEKFVRYGLDAWGSDELGIGFTRRFLLE 659
Query: 61 WLSFLHRYIPV 71
WLSF HRY+P+
Sbjct: 660 WLSFTHRYVPI 670
>gi|224077972|ref|XP_002305469.1| predicted protein [Populus trichocarpa]
gi|222848433|gb|EEE85980.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 59/90 (65%)
Query: 13 FQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLSFLHRYIPVG 72
F EIKE++ +DISS ER +ILK+YV GLEHWGSDT+GVETTR FLLEWL + RY+PVG
Sbjct: 108 FTEIKEQRRWDISSGERLNILKDYVRSGLEHWGSDTKGVETTRHFLLEWLGYTCRYVPVG 167
Query: 73 LLESTQKMNQRPPMYHGRNELETLMTSSNC 102
LL+ + P + +T C
Sbjct: 168 LLDVIPDGSTCAPKHKSYMSFNLHLTEQIC 197
>gi|547573|emb|CAA79376.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 106
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 56/77 (72%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 29 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 88
Query: 61 WLSFLHRYIPVGLLEST 77
++SF HRY+P+ ++ T
Sbjct: 89 FMSFFHRYVPMVFVKDT 105
>gi|625116|gb|AAB82358.1| Ylr401cp [Saccharomyces cerevisiae]
Length = 609
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIP 70
++SF HRY+P
Sbjct: 592 FMSFFHRYVP 601
>gi|159487180|ref|XP_001701612.1| predicted protein [Chlamydomonas reinhardtii]
gi|158269557|gb|EDO95915.1| predicted protein [Chlamydomonas reinhardtii]
Length = 69
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 44/53 (83%)
Query: 15 EIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEWLSFLHR 67
EIKE++ +DIS+ ER ++ K+Y GLEHWG+D+RGVE TRRFLLEWLSF HR
Sbjct: 17 EIKEQRHWDISAGERLELYKQYAAAGLEHWGADSRGVENTRRFLLEWLSFTHR 69
>gi|31789402|gb|AAP58518.1| hypothetical protein [uncultured Acidobacteria bacterium]
Length = 355
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ R ALIKPWIF+E + +DI++ ER + + YV EHWG D G+ R FL
Sbjct: 210 MVARAALIKPWIFREAVDG-YWDITAEERVGLYRRYVTLAREHWGDDEHGLARIRTFLNW 268
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGK 115
L F +RY+P + M +R R+ LE L+ + + I+E LL +
Sbjct: 269 HLEFWYRYVPRLEDGTFASMQRRVDTVPARSPLEALLARGDAAAKEYIAECLLSE 323
>gi|307110528|gb|EFN58764.1| hypothetical protein CHLNCDRAFT_140504 [Chlorella variabilis]
Length = 451
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+FQE+KE + +++ER I ++ V Y EH+ D RG FL
Sbjct: 280 MVGRGALIKPWLFQEVKEGRELCPTASERVGIYRQLVAYMKEHFRDDARGKRAAFYFLPW 339
Query: 61 WLSFLHRYIPV 71
+F RY P+
Sbjct: 340 HFNFFARYRPM 350
>gi|361125353|gb|EHK97399.1| putative tRNA-dihydrouridine synthase 3 [Glarea lozoyensis 74030]
Length = 687
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRG 50
MI RGALIKPW+F+EI++ + D S++ER ++++V YGLE WGSD G
Sbjct: 619 MIARGALIKPWLFEEIEKGQYLDKSASERLGYVEKFVRYGLETWGSDEVG 668
>gi|384252917|gb|EIE26392.1| FMN-linked oxidoreductase [Coccomyxa subellipsoidea C-169]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIFQE+KE + ++ +++R I ++ V++ EH+G D +G FL
Sbjct: 138 MVGRGALIKPWIFQEVKEGRELNLDASDRLGIYRQLVSHMKEHFGDDAKGRRKAFYFLPW 197
Query: 61 WLSFLHRY 68
F RY
Sbjct: 198 HFDFFCRY 205
>gi|302843625|ref|XP_002953354.1| hypothetical protein VOLCADRAFT_105870 [Volvox carteri f.
nagariensis]
gi|300261451|gb|EFJ45664.1| hypothetical protein VOLCADRAFT_105870 [Volvox carteri f.
nagariensis]
Length = 307
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M GRGALIKPW+F E KE + ++++ER + + V+Y EH+G D RG F
Sbjct: 157 MAGRGALIKPWLFLEFKEGRELLLTTSERVGVYRLLVSYMKEHFGDDERGRRKAWYFFPW 216
Query: 61 WLSFLHRYIPV 71
FL RY P+
Sbjct: 217 HFDFLTRYRPL 227
>gi|353240264|emb|CCA72141.1| related to DUS3-member of dihydrouridine synthase family, partial
[Piriformospora indica DSM 11827]
Length = 621
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKE 35
MIGRGALIKPWIF EIKE++ +DISS ER D++++
Sbjct: 587 MIGRGALIKPWIFTEIKERRDWDISSRERLDLIRK 621
>gi|159489528|ref|XP_001702749.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280771|gb|EDP06528.1| predicted protein [Chlamydomonas reinhardtii]
Length = 198
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M GRGALIKPWIFQE KE + + S+ ER + + V+Y EH+G D RG F
Sbjct: 130 MAGRGALIKPWIFQEYKEGREWLPSTEERVGVYRLLVSYMKEHFGDDERGRRKAWYFFPW 189
Query: 61 WLSFLHRYI 69
FL+R +
Sbjct: 190 HFDFLNRCV 198
>gi|145352754|ref|XP_001420702.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580937|gb|ABO98995.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 287
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPWIF+E +E+K ++ + +R + NY E +G D G F
Sbjct: 217 MVGRGALIKPWIFKEYRERKCWNPTVEQRVGVYYTLRNYMREGFGDDELGKRRFDEFFPW 276
Query: 61 WLSFLHRYIPV 71
L F RY P+
Sbjct: 277 HLGFFCRYRPL 287
>gi|353240275|emb|CCA72152.1| hypothetical protein PIIN_06087 [Piriformospora indica DSM 11827]
Length = 123
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 15/56 (26%)
Query: 1 MIGRGALIKPWIF---------------QEIKEKKLFDISSAERFDILKEYVNYGL 41
MIGRGALIKPWI EIKE++ +DISS ER D++++Y +GL
Sbjct: 1 MIGRGALIKPWILYGLVFFTLPYLMPRSTEIKERRDWDISSRERLDLIRKYAEFGL 56
>gi|323452132|gb|EGB08007.1| hypothetical protein AURANDRAFT_5440 [Aureococcus anophagefferens]
Length = 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGAL+ PW+F EI+ + ++ ER + E +G D RG FL
Sbjct: 130 MVGRGALVTPWLFDEIRSGSTWLPTAEERAAVYYELAANYRTQFGDDARGKNAAFYFLPF 189
Query: 61 WLSFLHRYIPV 71
+FLHR+ P+
Sbjct: 190 HFNFLHRWRPL 200
>gi|255071937|ref|XP_002499643.1| dihydrouridine synthase-like family protein [Micromonas sp. RCC299]
gi|226514905|gb|ACO60901.1| dihydrouridine synthase-like family protein [Micromonas sp. RCC299]
Length = 495
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M GRGALIKPWIF+E+ E + + ER ++ +Y EH+ +D G F+
Sbjct: 323 MTGRGALIKPWIFKEVAEGVEWAPTPEERVEVYLRLCSYFKEHFFTDEMGRGRYLEFMPW 382
Query: 61 WLSFLHRYIPV 71
F RY P+
Sbjct: 383 HFGFFCRYRPL 393
>gi|374386519|ref|ZP_09644019.1| nifR3 family putative TIM-barrel protein [Odoribacter laneus YIT
12061]
gi|373224448|gb|EHP46788.1| nifR3 family putative TIM-barrel protein [Odoribacter laneus YIT
12061]
Length = 329
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA+ +PWIF++IK + L D+S AE+ DILKE + ++ W + RG+ R
Sbjct: 225 MIGRGAIGRPWIFKQIKHYFQTGEMLPDLSVAEQIDILKEQILLSVD-WIDEIRGILHMR 283
Query: 56 RFL 58
R +
Sbjct: 284 RHM 286
>gi|158522876|ref|YP_001530746.1| nifR3 family TIM-barrel protein [Desulfococcus oleovorans Hxd3]
gi|158511702|gb|ABW68669.1| putative TIM-barrel protein, nifR3 family [Desulfococcus oleovorans
Hxd3]
Length = 326
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
M+GR A+ PWIF++I K + + S RF+++ EY+N + H+G D R
Sbjct: 222 MVGRAAIGAPWIFKQINACLAGKPVVEPSLEHRFEVMSEYINAMVAHYGED-----LACR 276
Query: 57 FLLEWLSFLHRYIPVGLL--ESTQKMNQR 83
+ L + R +P G L ES +++ +
Sbjct: 277 VMRSRLGWFTRAMPHGTLFRESIRRIETK 305
>gi|371778622|ref|ZP_09484944.1| nifR3 family TIM-barrel protein [Anaerophaga sp. HS1]
Length = 325
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA+ +PWIF+EIK + L D+S E ++++++V+ ++ W + RG+ +R
Sbjct: 225 MIGRGAIGRPWIFREIKHFLNTGELLPDLSIPEHVELIRDFVHKSID-WLGERRGILHSR 283
Query: 56 RFLLEWLSFLHRYIPV 71
R L L + P+
Sbjct: 284 RHLAITFKGLDNFRPI 299
>gi|344248723|gb|EGW04827.1| tRNA-dihydrouridine synthase 3-like [Cricetulus griseus]
Length = 120
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVN 38
MI GAL+KPW+ EIKE+K +DI S+E+ D L+++ +
Sbjct: 83 MIAGGALLKPWLLTEIKEQKHWDIWSSEQLDSLRDFTH 120
>gi|393724848|ref|ZP_10344775.1| nifR3 family TIM-barrel protein [Sphingomonas sp. PAMC 26605]
Length = 333
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ E +++ D S E++ ++ E+ L H+G++T GV R
Sbjct: 229 MIGRGAYGRPWLLGQVMEWFATGRRVPDPSIEEQYGVIAEHYEAMLSHYGNET-GVNMAR 287
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + + LH G E K+NQ P
Sbjct: 288 KHIGWYTRGLH-----GSAEFRNKVNQIP 311
>gi|444920535|ref|ZP_21240376.1| tRNA-dihydrouridine synthase B [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508354|gb|ELV08525.1| tRNA-dihydrouridine synthase B [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 321
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGA PWIF+ + E + + S E F+++ ++N E +G D +GV R+ LL
Sbjct: 222 MIGRGAFGNPWIFRSLVEDQEYRPSHDEIFEVINTHLNGLYELYG-DEKGVRVARKHLL- 279
Query: 61 WLS 63
W S
Sbjct: 280 WYS 282
>gi|424513198|emb|CCO66782.1| TIM-barrel protein, nifR3 family [Bathycoccus prasinos]
Length = 530
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILK-EYVNYGLEHWGSDTRGVETTRRFLL 59
M GRGALIKPWIF+E + ++ ER +++ + + E++G+D G + F+
Sbjct: 355 MTGRGALIKPWIFKEFYTNTSIEFTAKERIELVYFKLTTFMKEYFGADAIGKKRFDLFMP 414
Query: 60 EWLSFLHRYIPV 71
+ F RY P+
Sbjct: 415 WHIGFFCRYRPL 426
>gi|332184999|ref|ZP_08386748.1| TIM-barrel , nifR3 family protein [Sphingomonas sp. S17]
gi|332014723|gb|EGI56779.1| TIM-barrel , nifR3 family protein [Sphingomonas sp. S17]
Length = 333
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ ++L D S E++ + E+ + L+H+G++T GV R
Sbjct: 228 MIGRGAYGRPWLLGQVMHWFATGERLDDPSLDEQYRAVAEHYDAMLDHYGTET-GVNMAR 286
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + + LH G E K+NQ P
Sbjct: 287 KHIGWYTRGLH-----GSAEFRNKVNQEP 310
>gi|404253572|ref|ZP_10957540.1| tRNA-dihydrouridine synthase [Sphingomonas sp. PAMC 26621]
Length = 334
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ E ++ D S E++ ++ E+ + L H+G++T GV R
Sbjct: 230 MIGRGAYGRPWLLGQVMEWFAHGRRREDPSLEEQYTVIAEHYDAMLTHYGTET-GVNMAR 288
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + + LH G E K+NQ P
Sbjct: 289 KHIGWYTRGLH-----GSAEFRNKVNQIP 312
>gi|395493244|ref|ZP_10424823.1| nifR3 family TIM-barrel protein [Sphingomonas sp. PAMC 26617]
Length = 326
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ E ++ D S E++ ++ E+ + L H+G++T GV R
Sbjct: 222 MIGRGAYGRPWLLGQVMEWFAYGRRREDPSLEEQYTVIAEHYDAMLTHYGTET-GVNMAR 280
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + + LH G E K+NQ P
Sbjct: 281 KHIGWYTRGLH-----GSAEFRNKVNQIP 304
>gi|159468153|ref|XP_001692247.1| hypothetical protein CHLREDRAFT_171120 [Chlamydomonas reinhardtii]
gi|158278433|gb|EDP04197.1| predicted protein [Chlamydomonas reinhardtii]
Length = 260
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 104 DWIKISEMLLGKIPAGFSFLPKHKANSW 131
DW++ISEMLLG PA SF KHK+NS+
Sbjct: 187 DWLRISEMLLGPPPAPISFAAKHKSNSY 214
>gi|410621398|ref|ZP_11332246.1| tRNA-dihydrouridine synthase B [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410159119|dbj|GAC27620.1| tRNA-dihydrouridine synthase B [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 332
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA PWIF++I + L + S AE+ D+L +++ + +G DT GV R
Sbjct: 222 MIGRGAQGNPWIFRQISHFLSTGEYLLEPSIAEKLDVLTQHIQNVQQFYG-DTTGVRIAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHV 283
>gi|308810258|ref|XP_003082438.1| tRNA-dihydrouridine synthase (ISS) [Ostreococcus tauri]
gi|116060906|emb|CAL57384.1| tRNA-dihydrouridine synthase (ISS) [Ostreococcus tauri]
Length = 295
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERF 30
M+GRGALIKPWIF+E +EKK ++ ++ +R
Sbjct: 122 MVGRGALIKPWIFKEFREKKEWEPTAEDRV 151
>gi|393718420|ref|ZP_10338347.1| tRNA-dihydrouridine synthase [Sphingomonas echinoides ATCC 14820]
Length = 321
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG+ +PW+ ++ E +++ D S E++ ++ E+ + L H+G++T GV R
Sbjct: 217 MIGRGSYGRPWLLGQVMEWFASGRRVADPSIEEQYTVIAEHYDAMLSHYGNET-GVNMAR 275
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQ 82
+ + + LH G E ++NQ
Sbjct: 276 KHIGWYTRGLH-----GSAEFRNRVNQ 297
>gi|406899257|gb|EKD42578.1| tRNA-dihydrouridine synthase [uncultured bacterium]
Length = 324
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGR A+ +PW F+ + E+K F+ S AE +I+ N + +GS + GV+ R+ L
Sbjct: 227 MIGRAAVSEPWFFKSVLEEKSFEPSPAELKNIILNQYNDFFDFYGS-SNGVKMMRKHLCS 285
Query: 61 W 61
+
Sbjct: 286 Y 286
>gi|319789225|ref|YP_004150858.1| dihydrouridine synthase DuS [Thermovibrio ammonificans HB-1]
gi|317113727|gb|ADU96217.1| dihydrouridine synthase DuS [Thermovibrio ammonificans HB-1]
Length = 316
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFD-ILKE 35
M+GR A+ PWIF+E KE++ ++S AER D IL+E
Sbjct: 221 MVGRAAVSNPWIFKEYKERRDIEVSLAERVDFILRE 256
>gi|15606718|ref|NP_214098.1| hypothetical protein aq_1598 [Aquifex aeolicus VF5]
gi|39930814|sp|O67533.1|DUS_AQUAE RecName: Full=Probable tRNA-dihydrouridine synthase
gi|2983958|gb|AAC07506.1| hypothetical protein aq_1598 [Aquifex aeolicus VF5]
Length = 316
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
M+GR AL PWIF+E KEK+ ++ ER D + E ++ E+ + E + +
Sbjct: 219 MVGRAALSNPWIFKEFKEKRDIEVGLKERMDFILEELSMMTEYMSREKACAEIKSQIV 276
>gi|399060981|ref|ZP_10745870.1| putative TIM-barrel protein, nifR3 family [Novosphingobium sp.
AP12]
gi|398036413|gb|EJL29624.1| putative TIM-barrel protein, nifR3 family [Novosphingobium sp.
AP12]
Length = 344
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW ++ + D + E+++I++ + + LEH+GSDT GV R
Sbjct: 234 MIGRGAYGRPWFLGQVMQWWRGTDVAEDPTIGEQYEIMRRHYDDMLEHYGSDT-GVRMAR 292
Query: 56 RFL 58
+ L
Sbjct: 293 KHL 295
>gi|359784328|ref|ZP_09287500.1| hypothetical protein MOY_00585 [Halomonas sp. GFAJ-1]
gi|359298288|gb|EHK62504.1| hypothetical protein MOY_00585 [Halomonas sp. GFAJ-1]
Length = 331
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA PWIFQEI ++L S ER +L E+V L + +T GV R
Sbjct: 215 MIGRGAQGNPWIFQEINHYLTHGERLASPSLTERCQVLAEHVG-ALHTFYGETMGVRIAR 273
Query: 56 RFL 58
+ +
Sbjct: 274 KHV 276
>gi|353327911|ref|ZP_08970238.1| NifR3 family protein [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 316
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + K+ + +++ER I+ ++ + LE++GSDT G++ R+
Sbjct: 221 MIGRGAYGKPWLINQAINFLSGNKVSEPTASERLSIILKHYDSILEYYGSDT-GIKMARK 279
Query: 57 FL 58
+
Sbjct: 280 HI 281
>gi|408671988|ref|YP_006871736.1| TIM-barrel protein, nifR3 family [Emticicia oligotrophica DSM
17448]
gi|387853612|gb|AFK01709.1| TIM-barrel protein, nifR3 family [Emticicia oligotrophica DSM
17448]
Length = 342
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK +KL S A+R D ++++ + ++ W +D +G+ R
Sbjct: 226 MIGRAAIGYPWIFNEIKHYFATGEKLAPPSIAQRVDAARKHLEFSIK-WKNDRQGILEMR 284
Query: 56 R 56
R
Sbjct: 285 R 285
>gi|311745604|ref|ZP_07719389.1| TIM-barrel protein, putative, NifR3 family [Algoriphagus sp. PR1]
gi|126578167|gb|EAZ82387.1| TIM-barrel protein, putative, NifR3 family [Algoriphagus sp. PR1]
Length = 329
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIF EIK +KL S ER + K+++++ +E W + +G+ R
Sbjct: 226 MIGRASIGYPWIFNEIKHFLATGEKLEAPSIEERIAVAKQHLDFSVE-WKGEKQGILEMR 284
Query: 56 RFLLEWLSFLHRYIPV 71
R + + + P+
Sbjct: 285 RHYTNYFRGMPNFKPI 300
>gi|441498187|ref|ZP_20980388.1| tRNA dihydrouridine synthase B [Fulvivirga imtechensis AK7]
gi|441438094|gb|ELR71437.1| tRNA dihydrouridine synthase B [Fulvivirga imtechensis AK7]
Length = 330
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK +KL A+R ++ K+++N+ +E W + G+ R
Sbjct: 226 MIGRAAIGYPWIFNEIKHYLKTGEKLPAPLLADRIEVAKKHLNFSVE-WKGELTGIYEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFRGIPHFKP 299
>gi|409195991|ref|ZP_11224654.1| nifR3 family TIM-barrel protein [Marinilabilia salmonicolor JCM
21150]
Length = 344
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GR ++ +PWIF+EI+ + L + AE ++++E VN ++ W + RG+ +R
Sbjct: 237 MVGRPSIGRPWIFKEIRHYLDTGELLPAPTMAEHVEMIREQVNMSVK-WLGERRGILHSR 295
Query: 56 RFLLEWLSFLHRYIPVGL----LESTQKMNQ 82
R L L + P+ + ES +++N+
Sbjct: 296 RHLAVTFKGLENFRPLKIKMLRTESIEELNE 326
>gi|296125339|ref|YP_003632591.1| dihydrouridine synthase DuS [Brachyspira murdochii DSM 12563]
gi|296017155|gb|ADG70392.1| dihydrouridine synthase DuS [Brachyspira murdochii DSM 12563]
Length = 324
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 1 MIGRGALIKPWIFQEI------KEKKLFDISSAERF-DILKEYVNYGLEHWGSDTRGVET 53
M+GRGA+ PWIF+E+ + DI+ + +I+KE++N E +G + G+
Sbjct: 228 MVGRGAVGNPWIFRELNTIFEDNDDYNNDITENDSLKNIIKEHINGCCELYG-EISGIHF 286
Query: 54 TRRFLLEWLS 63
R+F++++L+
Sbjct: 287 MRKFVMKYLT 296
>gi|429124965|ref|ZP_19185497.1| Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein
[Brachyspira hampsonii 30446]
gi|426279027|gb|EKV56054.1| Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein
[Brachyspira hampsonii 30446]
Length = 323
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 1 MIGRGALIKPWIFQEI----KEKKLFDISSAERF-DILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA+ PWIF E+ ++ + ++ +I+KE++N E +G + G+ R
Sbjct: 228 MVGRGAIGNPWIFAELNTIFEDNNEYKTKEEDKLKNIIKEHINGCCELYG-EVSGIHFMR 286
Query: 56 RFLLEWLS 63
+F++++L+
Sbjct: 287 KFVMKYLT 294
>gi|342215895|ref|ZP_08708542.1| dihydrouridine synthase [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586785|gb|EGS30185.1| dihydrouridine synthase [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 235
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 2 IGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLEW 61
IGRGA+ PWIFQ+I+ S ER ++ ++++ L ++G +G+ R+ LL +
Sbjct: 146 IGRGAIGNPWIFQDIQP------SLEERIQVMMDHLDKALAYYGQ-RQGILEMRKHLLAY 198
Query: 62 LSFL 65
+ L
Sbjct: 199 MKGL 202
>gi|256419707|ref|YP_003120360.1| hypothetical protein Cpin_0661 [Chitinophaga pinensis DSM 2588]
gi|256034615|gb|ACU58159.1| TIM-barrel protein, nifR3 family [Chitinophaga pinensis DSM 2588]
Length = 354
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK + L S ER ++ K+++ + ++ W D G+ R
Sbjct: 226 MIGRAAIGYPWIFNEIKHFMQTGEHLPPPSVLERVEVCKKHLQHSVQ-WKGDVVGILEMR 284
Query: 56 RFLLEWLSFL 65
R +L L
Sbjct: 285 RHYTNYLKGL 294
>gi|445063508|ref|ZP_21375702.1| dihydrouridine synthase-like FMN-binding domain-containing protein
[Brachyspira hampsonii 30599]
gi|444505113|gb|ELV05681.1| dihydrouridine synthase-like FMN-binding domain-containing protein
[Brachyspira hampsonii 30599]
Length = 323
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 1 MIGRGALIKPWIFQEI----KEKKLFDISSAERF-DILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA+ PWIF E+ ++ + + ++ +I+KE++N E +G + G+ R
Sbjct: 228 MVGRGAIGNPWIFVELNTIFEDNNEYKMREEDKLKNIIKEHINGCCELYG-EVSGIHFMR 286
Query: 56 RFLLEWLS 63
+F++++L+
Sbjct: 287 KFVMKYLT 294
>gi|359396473|ref|ZP_09189524.1| tRNA-dihydrouridine synthase B [Halomonas boliviensis LC1]
gi|357969151|gb|EHJ91599.1| tRNA-dihydrouridine synthase B [Halomonas boliviensis LC1]
Length = 355
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIK-----EKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA PWIFQ+I +++ S ER +L +V E +G+ T GV R
Sbjct: 239 MVGRGAQGNPWIFQQISYYLQHGERMALPSLTERHQVLHGHVEALHEFYGT-TMGVRIAR 297
Query: 56 RFLLEWLSFLHRYIP 70
+ + +LS R+ P
Sbjct: 298 KHVGWYLSDDQRFTP 312
>gi|325295522|ref|YP_004282036.1| dihydrouridine synthase DuS [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065970|gb|ADY73977.1| dihydrouridine synthase DuS [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 310
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFD-ILKE 35
MIGR AL PWIF+E KEKK ++ ER + IL+E
Sbjct: 221 MIGRAALANPWIFKEFKEKKDIEVRLKERIEFILRE 256
>gi|124002638|ref|ZP_01687490.1| NifR [Microscilla marina ATCC 23134]
gi|123991866|gb|EAY31253.1| NifR [Microscilla marina ATCC 23134]
Length = 330
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK KKL + +R + +++ + +E W + +GV R
Sbjct: 226 MIGRAAIGYPWIFNEIKHYMATGKKLAPPTLEQRVAVCHQHLVHSVE-WKGEKQGVFEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + H + P
Sbjct: 285 RHYTNYFRGFHGFKP 299
>gi|308270351|emb|CBX26963.1| Probable tRNA-dihydrouridine synthase [uncultured Desulfobacterium
sp.]
Length = 351
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 1 MIGRGALIKPWIFQEIK----EKKLFDISSAERFDILKEYVNYGLEHWG 45
MIGR A+ PWIF++I+ ++ + S A+RFD +K Y+ E++G
Sbjct: 247 MIGRAAIGNPWIFEQIRALMSKEPIAPASLAQRFDGMKGYLKANAEYFG 295
>gi|118581480|ref|YP_902730.1| nifR3 family TIM-barrel protein [Pelobacter propionicus DSM 2379]
gi|118504190|gb|ABL00673.1| tRNA-U20-dihydrouridine synthase [Pelobacter propionicus DSM 2379]
Length = 329
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYVNYGLEHWG 45
M+ RGAL PWIF+++ E +I++AER D+++ ++ L+ WG
Sbjct: 225 MVARGALGTPWIFRQVLELGESGSFREITNAERADMIRLHLELYLQTWG 273
>gi|346224387|ref|ZP_08845529.1| putative TIM-barrel protein, dihydrouridine synthase [Anaerophaga
thermohalophila DSM 12881]
Length = 338
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ +PWIF+EI+ + L + E ++++E VN +E W + RG+ +R
Sbjct: 231 MIGRPAIGRPWIFREIRHYLDTGELLPAPTIPEHVEMIREQVNKSVE-WLGERRGILHSR 289
Query: 56 RFLLEWLSFLHRYIPVGL 73
R L L + P+ +
Sbjct: 290 RHLATTFKGLEHFRPLKI 307
>gi|300727518|ref|ZP_07060909.1| TIM-barrel protein, NifR3 family [Prevotella bryantii B14]
gi|299775221|gb|EFI71822.1| TIM-barrel protein, NifR3 family [Prevotella bryantii B14]
Length = 333
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 1 MIGRGALIKPWIFQEIK-------EKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVET 53
M+GR +PWIF+EI+ + KL DI+ ++ DIL+E + +E + RG+
Sbjct: 225 MVGRATFGRPWIFKEIRDYLDGKPDDKLLDIN--KKIDILEEQLKINVERI-DEYRGILH 281
Query: 54 TRRFL 58
TRR L
Sbjct: 282 TRRHL 286
>gi|404449319|ref|ZP_11014309.1| tRNA-U20-dihydrouridine synthase [Indibacter alkaliphilus LW1]
gi|403765007|gb|EJZ25892.1| tRNA-U20-dihydrouridine synthase [Indibacter alkaliphilus LW1]
Length = 330
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIF EIK +KL AER D+ ++++++ ++ W + +G+ R
Sbjct: 226 MIGRASIGYPWIFDEIKHYFKTGEKLPAPELAERIDVTRKHLDFSVK-WKGEKQGILEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFRGMPNFKP 299
>gi|324528660|gb|ADY48937.1| tRNA-dihydrouridine synthase 3, partial [Ascaris suum]
Length = 90
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 1 MIGRGALIKPWIFQEIKEKK 20
MI RGALIKPWIF EIKE++
Sbjct: 36 MIARGALIKPWIFTEIKERR 55
>gi|332143328|ref|YP_004429066.1| tRNA-dihydrouridine synthase B [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553350|gb|AEB00069.1| tRNA-dihydrouridine synthase B [Alteromonas macleodii str. 'Deep
ecotype']
Length = 332
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA KPWIF +I+ + L +E+++IL E+V + +G D GV R
Sbjct: 222 MIGRGAQGKPWIFNQIQHYLETGENLAPPPLSEQYEILHEHVANVQDFYG-DIAGVRIAR 280
Query: 56 RFLLEWLS 63
+ + +LS
Sbjct: 281 KHVGWYLS 288
>gi|332800061|ref|YP_004461560.1| nifR3 family TIM-barrel protein [Tepidanaerobacter acetatoxydans
Re1]
gi|438003359|ref|YP_007273102.1| tRNA dihydrouridine synthase B [Tepidanaerobacter acetatoxydans
Re1]
gi|332697796|gb|AEE92253.1| TIM-barrel protein, nifR3 family [Tepidanaerobacter acetatoxydans
Re1]
gi|432180153|emb|CCP27126.1| tRNA dihydrouridine synthase B [Tepidanaerobacter acetatoxydans
Re1]
Length = 323
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 1 MIGRGALIKPWIFQEIK-----EKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGAL PWIF+E+K KK + ER +I+ ++N + + G + GV R
Sbjct: 220 MIGRGALGNPWIFREVKYFLKTGKKTAAPTLKERLEIMLLHLNNAISYHG-EHLGVLEMR 278
Query: 56 RFLLEWLSFLHRYIPV 71
+ L ++ L PV
Sbjct: 279 KHLAWYIKGLPHSAPV 294
>gi|402822222|ref|ZP_10871720.1| dihydrouridine synthase TIM-barrel protein nifR3 [Sphingomonas sp.
LH128]
gi|402264246|gb|EJU14111.1| dihydrouridine synthase TIM-barrel protein nifR3 [Sphingomonas sp.
LH128]
Length = 343
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEI-----KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG+ +PW ++ E D A ++DI++ + L+H+G+DT GV R
Sbjct: 234 MIGRGSYGRPWFLSQVMQWWRGEAVSADPDIAGQYDIIRRHYEDMLDHYGADT-GVRMAR 292
Query: 56 RFL 58
+ L
Sbjct: 293 KHL 295
>gi|190570967|ref|YP_001975325.1| NifR3 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357239|emb|CAQ54661.1| NifR3 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 316
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRG KPW+ + + K+ + +++ER I+ ++ + LE++GSDT G++ R+
Sbjct: 221 MIGRGTYGKPWLINQAINFLSGNKVSEPTASERLSIILKHYDSILEYYGSDT-GIKMARK 279
Query: 57 FL 58
+
Sbjct: 280 HI 281
>gi|348030855|ref|YP_004873541.1| tRNA-dihydrouridine synthase B [Glaciecola nitratireducens FR1064]
gi|347948198|gb|AEP31548.1| tRNA-dihydrouridine synthase B [Glaciecola nitratireducens FR1064]
Length = 332
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIK-----EKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA PWIF++I + L + S AE+ ++L ++V + +G DT GV R
Sbjct: 222 MIGRGAQGNPWIFRQISYFLSTGEYLSEPSIAEKLEVLTQHVQNVQQFYG-DTMGVRIAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHV 283
>gi|160902971|ref|YP_001568552.1| dihydrouridine synthase DuS [Petrotoga mobilis SJ95]
gi|160360615|gb|ABX32229.1| dihydrouridine synthase DuS [Petrotoga mobilis SJ95]
Length = 301
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
++ RGA+ PWIF K ++ + ER D E++ +E +GS+ V+ R+ L++
Sbjct: 212 LVARGAIGNPWIFT----KNNYNPTIDERIDTCLEHLKLMIEFYGSEVYAVKKFRKVLMK 267
Query: 61 WLS 63
+ S
Sbjct: 268 YFS 270
>gi|404495115|ref|YP_006719221.1| tRNA dihydrouridine synthase-like flavin mononucleotide-binding
domain-containing protein [Geobacter metallireducens
GS-15]
gi|78192736|gb|ABB30503.1| tRNA dihydrouridine synthase-like flavin mononucleotide-binding
domain protein [Geobacter metallireducens GS-15]
Length = 331
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWG 45
M+GRGA+ P +FQ ++ K + + ER +LK Y+ LE +G
Sbjct: 238 MLGRGAIADPLLFQRLRGKAPAEPTGEERVAMLKRYLGELLEGYG 282
>gi|83311464|ref|YP_421728.1| NifR3-like protein [Magnetospirillum magneticum AMB-1]
gi|82946305|dbj|BAE51169.1| NifR3-like protein [Magnetospirillum magneticum AMB-1]
Length = 305
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG +PW+ ++ ++L D S AE+ I+ E+++ L H+GS+ GV R
Sbjct: 201 MIGRGTYGRPWLPGQVAHYLATGERLPDPSRAEQLQIMLEHLDAMLSHYGSEP-GVRIAR 259
Query: 56 RFL 58
+ +
Sbjct: 260 KHM 262
>gi|338209927|ref|YP_004653974.1| nitrogen regulator protein NIfR3 [Runella slithyformis DSM 19594]
gi|336303740|gb|AEI46842.1| TIM-barrel protein, nifR3 family [Runella slithyformis DSM 19594]
Length = 329
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIF EIK + L ++AER + ++++++ + W + G+ R
Sbjct: 226 MIGRASIGYPWIFNEIKHFMRTGEHLLPPTTAERVRVCRKHLDFSI-RWKGERTGIVEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + L + P
Sbjct: 285 RHYASYFKGLDNFKP 299
>gi|213019483|ref|ZP_03335289.1| NifR3 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212994905|gb|EEB55547.1| NifR3 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 298
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRG KPW+ + + K+ + +++ER I+ ++ + LE++GSDT G++ R+
Sbjct: 203 MIGRGTYGKPWLINQAINFLSGNKVSEPTASERLSIILKHYDSILEYYGSDT-GIKMARK 261
Query: 57 FL 58
+
Sbjct: 262 HI 263
>gi|225631215|ref|ZP_03787910.1| NifR3 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591088|gb|EEH12275.1| NifR3 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 310
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + + + +++ER I+ E+ + LE++G+DT G++ R+
Sbjct: 211 MIGRGAYGKPWLINQAMNFLSGSETSEPTASERLSIILEHYDNILEYYGNDT-GIKMARK 269
Query: 57 FL 58
+
Sbjct: 270 HI 271
>gi|42519943|ref|NP_965858.1| NifR3 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42409680|gb|AAS13792.1| NifR3 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 320
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + + + +++ER I+ E+ + LE++G+DT G++ R+
Sbjct: 221 MIGRGAYGKPWLINQAMNFLSGSETSEPTASERLSIILEHYDNILEYYGNDT-GIKMARK 279
Query: 57 FL 58
+
Sbjct: 280 HI 281
>gi|410863484|ref|YP_006978718.1| tRNA-dihydrouridine synthase B [Alteromonas macleodii AltDE1]
gi|410820746|gb|AFV87363.1| tRNA-dihydrouridine synthase B [Alteromonas macleodii AltDE1]
Length = 332
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA KPWIF +I+ + L +E+++IL E+V + +G D GV R
Sbjct: 222 MVGRGAQGKPWIFNQIQHYLETGENLAPPPLSEQYEILHEHVANVQDFYG-DIAGVRIAR 280
Query: 56 RFLLEWLS 63
+ + +LS
Sbjct: 281 KHVGWYLS 288
>gi|225629894|ref|YP_002726685.1| NifR3 family protein [Wolbachia sp. wRi]
gi|225591875|gb|ACN94894.1| NifR3 family protein [Wolbachia sp. wRi]
Length = 320
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + + + +++ER I+ E+ + LE++G+DT G++ R+
Sbjct: 221 MIGRGAYGKPWLINQAMNFLSGSETSEPTASERLSIILEHYDNILEYYGNDT-GIKMARK 279
Query: 57 FL 58
+
Sbjct: 280 HI 281
>gi|373450680|ref|ZP_09542653.1| tRNA-dihydrouridine synthase (similar to nitrogen regulation
protein nifR3) [Wolbachia pipientis wAlbB]
gi|371932115|emb|CCE77665.1| tRNA-dihydrouridine synthase (similar to nitrogen regulation
protein nifR3) [Wolbachia pipientis wAlbB]
Length = 316
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + K+ + +++ER I+ ++ + LE++GSD G++ R+
Sbjct: 221 MIGRGAYGKPWLINQAINFLSGNKVSEPTASERLSIILKHYDSILEYYGSDI-GIKMARK 279
Query: 57 FL 58
+
Sbjct: 280 HI 281
>gi|58698977|ref|ZP_00373831.1| dihydrouridine synthase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534506|gb|EAL58651.1| dihydrouridine synthase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 302
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + + + +++ER I+ E+ + LE++G+DT G++ R+
Sbjct: 203 MIGRGAYGKPWLINQAMNFLSGSETSEPTASERLSIILEHYDNILEYYGNDT-GIKMARK 261
Query: 57 FL 58
+
Sbjct: 262 HI 263
>gi|418066943|ref|ZP_12704298.1| dihydrouridine synthase DuS [Geobacter metallireducens RCH3]
gi|373559655|gb|EHP85944.1| dihydrouridine synthase DuS [Geobacter metallireducens RCH3]
Length = 306
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWG 45
M+GRGA+ P +FQ ++ K + + ER +LK Y+ LE +G
Sbjct: 213 MLGRGAIADPLLFQRLRGKAPAEPTGEERVAMLKRYLGELLEGYG 257
>gi|187777496|ref|ZP_02993969.1| hypothetical protein CLOSPO_01071 [Clostridium sporogenes ATCC
15579]
gi|187774424|gb|EDU38226.1| TIM-barrel protein, nifR3 family [Clostridium sporogenes ATCC
15579]
Length = 323
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 1 MIGRGALIKPWIFQEIKEK----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
M+GRGA PWIF++I EK ++ +S ER DI + LE++ + + V R+
Sbjct: 223 MVGRGAQGNPWIFKQINEKIKGEHVYYPTSQERIDICINHYKRALEYF-EEHKAVREMRK 281
Query: 57 FLLEWLSFL 65
+ ++ L
Sbjct: 282 HVAVYVKGL 290
>gi|58697366|ref|ZP_00372700.1| NifR3 family protein [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536243|gb|EAL59783.1| NifR3 family protein [Wolbachia endosymbiont of Drosophila
simulans]
Length = 262
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA KPW+ + + + + +++ER I+ E+ + LE++G+DT G++ R+
Sbjct: 163 MIGRGAYGKPWLINQAMNFLSGSETSEPTASERLSIILEHYDNILEYYGNDT-GIKMARK 221
Query: 57 FL 58
+
Sbjct: 222 HI 223
>gi|291515732|emb|CBK64942.1| tRNA-U20-dihydrouridine synthase [Alistipes shahii WAL 8301]
Length = 340
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR +PWIF+E+K + L S AER I KE++ LE G D G+ R
Sbjct: 225 MIGRATYGRPWIFREVKHYLSTGEALPQPSVAERVAIAKEHLQKSLEIKG-DHVGILEMR 283
Query: 56 RFLLEWLSFL 65
R + + L
Sbjct: 284 RHMTNYFKGL 293
>gi|228470160|ref|ZP_04055069.1| NifR3 family protein [Porphyromonas uenonis 60-3]
gi|228308298|gb|EEK17153.1| NifR3 family protein [Porphyromonas uenonis 60-3]
Length = 330
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKEK-----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GR A+ +PWIF E++ +SS ++ +ILKE V+ +E + RG+ +R
Sbjct: 225 MVGRAAIGQPWIFGEMRAAVDPTFTAPKLSSQQQLEILKEIVHKNIEKL-DERRGILHSR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|157825185|ref|YP_001492905.1| nifR3 family TIM-barrel protein [Rickettsia akari str. Hartford]
gi|157799143|gb|ABV74397.1| Putative TIM-barrel protein, nifR3 family [Rickettsia akari str.
Hartford]
Length = 327
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA KPWI +I ++ D S AE+ DI+ E+ L+++G G+ R
Sbjct: 224 MVGRGAYGKPWIISQIDHYLKTGERKPDPSIAEQLDIVTEHCEAILDYYGKSV-GIPIAR 282
Query: 56 RFLLEWLS 63
+ + W S
Sbjct: 283 KH-ISWYS 289
>gi|225619221|ref|YP_002720447.1| dihydrouridine synthase-like FMN-binding domain-containing protein
[Brachyspira hyodysenteriae WA1]
gi|225214040|gb|ACN82774.1| Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein
[Brachyspira hyodysenteriae WA1]
Length = 325
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 1 MIGRGALIKPWIFQEI----KEKKLFDISSAERF---DILKEYVNYGLEHWGSDTRGVET 53
M+GRGA+ PWIF E+ ++ ++ E+ +I+KE++N E +G + G+
Sbjct: 228 MVGRGAIGNPWIFTELNTIFEDNDEYNNKIDEKDNLKNIIKEHINGCCELYG-EVSGIHF 286
Query: 54 TRRFLLEWLS 63
R+F++++L+
Sbjct: 287 MRKFIMKYLT 296
>gi|410099087|ref|ZP_11294060.1| hypothetical protein HMPREF1076_03238 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219568|gb|EKN12529.1| hypothetical protein HMPREF1076_03238 [Parabacteroides goldsteinii
CL02T12C30]
Length = 328
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-KKLFDISSAERF----DILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG++ +PWIF+E+K + E+F DILK+ VN +E + RG+ R
Sbjct: 225 MIGRGSIGRPWIFREVKHFLTTGETLPEEKFTWYLDILKQQVNQSVERL-DERRGILHIR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|375012679|ref|YP_004989667.1| putative TIM-barrel protein, nifR3 family [Owenweeksia
hongkongensis DSM 17368]
gi|359348603|gb|AEV33022.1| putative TIM-barrel protein, nifR3 family [Owenweeksia
hongkongensis DSM 17368]
Length = 331
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PW+F EIK +KL + AER + +++ L+ W + G++ TR
Sbjct: 226 MIGRASIGYPWVFNEIKHFFETGEKLPSPTIAERVEAARQHFEMALK-WKGEQLGIKETR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFKGIKDFKP 299
>gi|424835875|ref|ZP_18260534.1| dihydrouridine synthase [Clostridium sporogenes PA 3679]
gi|365977745|gb|EHN13843.1| dihydrouridine synthase [Clostridium sporogenes PA 3679]
Length = 323
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 1 MIGRGALIKPWIFQEIKEK----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
M+GRGA PWIF++I EK ++ +S ER DI + LE++ + + V R+
Sbjct: 223 MVGRGAQGNPWIFKQINEKIKGEHVYYPTSQERIDICINHYKRALEYF-EEHKAVREMRK 281
Query: 57 FLLEWLSFL 65
+ ++ L
Sbjct: 282 HVAVYVKGL 290
>gi|387819803|ref|YP_005680150.1| tRNA dihydrouridine synthase B [Clostridium botulinum H04402 065]
gi|322807847|emb|CBZ05422.1| tRNA dihydrouridine synthase B [Clostridium botulinum H04402 065]
Length = 323
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 1 MIGRGALIKPWIFQEIKEK----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
M+GRGA PWIF++I EK ++ +S ER DI + LE++ + + V R+
Sbjct: 223 MVGRGAQGNPWIFKQINEKIKGEHVYYPTSQERIDICINHYKRALEYF-EEHKAVREMRK 281
Query: 57 FLLEWLSFL 65
+ ++ L
Sbjct: 282 HVAVYVKGL 290
>gi|410938954|ref|ZP_11370794.1| TIM-barrel protein, nifR3 family [Leptospira noguchii str.
2006001870]
gi|410786155|gb|EKR75106.1| TIM-barrel protein, nifR3 family [Leptospira noguchii str.
2006001870]
Length = 325
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF +K++KL S +E D++ ++V + +E +G ++ G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSGVKKEKL---SWSEISDVVLQHVRWMIEDYGEES-GLVLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|347528184|ref|YP_004834931.1| putative tRNA-dihydrouridine synthase [Sphingobium sp. SYK-6]
gi|345136865|dbj|BAK66474.1| putative tRNA-dihydrouridine synthase [Sphingobium sp. SYK-6]
Length = 342
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ + + D AE++ ++ E+ L+H+G T GV R
Sbjct: 228 MIGRGAYGRPWLLGQVMQALATGEHRSDPDLAEQYAMITEHYRAMLDHYGEMT-GVNMAR 286
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ L W + R +P G E K+NQ P
Sbjct: 287 KH-LGWYT---RGLP-GSAEFRNKVNQVP 310
>gi|421112629|ref|ZP_15573086.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str. JET]
gi|410802274|gb|EKS08435.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str. JET]
Length = 318
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLF--DISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
++GR A+ PWIF EIK++KL DIS+ ++ E++ + +E +G + G+ R+ L
Sbjct: 223 LVGRAAIGNPWIFSEIKKEKLCWNDIST-----VILEHLRWMVEDFGEEF-GLVLFRKHL 276
Query: 59 LEWLSFLHRYIPV 71
+++LS L + PV
Sbjct: 277 VKYLSGLE-FDPV 288
>gi|410448063|ref|ZP_11302149.1| TIM-barrel protein, nifR3 family [Leptospira sp. Fiocruz LV3954]
gi|410017962|gb|EKO80008.1| TIM-barrel protein, nifR3 family [Leptospira sp. Fiocruz LV3954]
Length = 318
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLF--DISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
++GR A+ PWIF EIK++KL DIS+ ++ E++ + +E +G + G+ R+ L
Sbjct: 223 LVGRAAIGNPWIFSEIKKEKLCWNDIST-----VILEHLRWMVEDFGEEF-GLVLFRKHL 276
Query: 59 LEWLSFLHRYIPV 71
+++LS L + PV
Sbjct: 277 VKYLSGLE-FDPV 288
>gi|418745797|ref|ZP_13302133.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str.
CBC379]
gi|418752521|ref|ZP_13308780.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str.
MOR084]
gi|409967079|gb|EKO34917.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str.
MOR084]
gi|410793428|gb|EKR91347.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str.
CBC379]
Length = 318
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLF--DISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
++GR A+ PWIF EIK++KL DIS+ ++ E++ + +E +G + G+ R+ L
Sbjct: 223 LVGRAAIGNPWIFSEIKKEKLCWNDIST-----VILEHLRWMVEDFGEEF-GLVLFRKHL 276
Query: 59 LEWLSFLHRYIPV 71
+++LS L + PV
Sbjct: 277 VKYLSGLE-FDPV 288
>gi|422004868|ref|ZP_16352079.1| tRNA-dihydrouridine synthase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256464|gb|EKT85884.1| tRNA-dihydrouridine synthase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 318
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLF--DISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
++GR A+ PWIF EIK++KL DIS+ ++ E++ + +E +G + G+ R+ L
Sbjct: 223 LVGRAAIGNPWIFSEIKKEKLCWNDIST-----VILEHLRWMVEDFGEEF-GLVLFRKHL 276
Query: 59 LEWLSFLHRYIPV 71
+++LS L + PV
Sbjct: 277 VKYLSGLE-FDPV 288
>gi|167752089|ref|ZP_02424216.1| hypothetical protein ALIPUT_00331 [Alistipes putredinis DSM 17216]
gi|167660330|gb|EDS04460.1| TIM-barrel protein, nifR3 family [Alistipes putredinis DSM 17216]
Length = 340
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR +PWIF+E+K + + S AER +I KE++ LE G D G+ R
Sbjct: 225 MIGRATYGRPWIFREVKHFLETGEVMPQPSVAERVEIAKEHLAKSLEIKG-DRVGILEMR 283
Query: 56 RFLLEWLSFLHRY 68
R L + L +
Sbjct: 284 RHLSNYFKGLPNF 296
>gi|395219899|ref|ZP_10402594.1| nifR3 family TIM-barrel protein [Pontibacter sp. BAB1700]
gi|394453784|gb|EJF08597.1| nifR3 family TIM-barrel protein [Pontibacter sp. BAB1700]
Length = 329
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIF EIK + L + ER ++ +++ + LE W D G+ R
Sbjct: 226 MIGRASIGHPWIFNEIKHYMATGEVLAPPTLEERVEVCRQHFTHSLE-WKGDKLGIFEMR 284
Query: 56 RFLLEWLSFLHRYIPV 71
R + L + P+
Sbjct: 285 RHYTNYFRGLPHFKPL 300
>gi|456875424|gb|EMF90625.1| TIM-barrel protein, nifR3 family [Leptospira santarosai str. ST188]
Length = 318
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLF--DISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
++GR A+ PWIF EIK++KL DIS+ ++ E++ + +E +G + G+ R+ L
Sbjct: 223 LVGRAAIGNPWIFSEIKKEKLCWNDIST-----VILEHLRWMVEDFGEEF-GLVLFRKHL 276
Query: 59 LEWLSFLHRYIPV 71
+++LS L + PV
Sbjct: 277 VKYLSGLE-FDPV 288
>gi|359684327|ref|ZP_09254328.1| tRNA-dihydrouridine synthase [Leptospira santarosai str.
2000030832]
Length = 318
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 1 MIGRGALIKPWIFQEIKEKKLF--DISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
++GR A+ PWIF EIK++KL DIS+ ++ E++ + +E +G + G+ R+ L
Sbjct: 223 LVGRAAIGNPWIFSEIKKEKLCWNDIST-----VILEHLRWMVEDFGEEF-GLVLFRKHL 276
Query: 59 LEWLSFLHRYIPV 71
+++LS L + PV
Sbjct: 277 VKYLSGLE-FDPV 288
>gi|68171250|ref|ZP_00544653.1| Dihydrouridine synthase TIM-barrel protein nifR3 [Ehrlichia
chaffeensis str. Sapulpa]
gi|88657985|ref|YP_507556.1| putative tRNA-dihydrouridine synthase [Ehrlichia chaffeensis str.
Arkansas]
gi|67999332|gb|EAM85978.1| Dihydrouridine synthase TIM-barrel protein nifR3 [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599442|gb|ABD44911.1| putative tRNA-dihydrouridine synthase [Ehrlichia chaffeensis str.
Arkansas]
Length = 317
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLF-DISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA KPW + IK + D S +E+ I+ + ++ +E++G DT GV+ ++
Sbjct: 219 MIGRGAYGKPWFINQALHFIKSGTILPDPSPSEKLKIITNHYDHMIEYYGKDT-GVKISK 277
Query: 56 RFL 58
+ +
Sbjct: 278 KHI 280
>gi|118475725|ref|YP_891451.1| tRNA-dihydrouridine synthase B [Campylobacter fetus subsp. fetus
82-40]
gi|261885859|ref|ZP_06009898.1| tRNA-dihydrouridine synthase B [Campylobacter fetus subsp.
venerealis str. Azul-94]
gi|424820155|ref|ZP_18245193.1| tRNA-dihydrouridine synthase B [Campylobacter fetus subsp.
venerealis NCTC 10354]
gi|118414951|gb|ABK83371.1| tRNA-dihydrouridine synthase B [Campylobacter fetus subsp. fetus
82-40]
gi|342326934|gb|EGU23418.1| tRNA-dihydrouridine synthase B [Campylobacter fetus subsp.
venerealis NCTC 10354]
Length = 306
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGR ++ PWIF EIK KK D + ++ I+ E+ N L ++G G+ R+ L E
Sbjct: 218 MIGRASIGNPWIFYEIKHKKPVDKNIKKQ--IVLEHFNEMLNYYGE--HGIGIFRKHLHE 273
Query: 61 W 61
+
Sbjct: 274 Y 274
>gi|334142006|ref|YP_004535213.1| dihydrouridine synthase TIM-barrel protein nifR3 [Novosphingobium
sp. PP1Y]
gi|333940037|emb|CCA93395.1| dihydrouridine synthase TIM-barrel protein nifR3 [Novosphingobium
sp. PP1Y]
Length = 338
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEI-----KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG+ +PW ++ + D + A +++I++ + LEH+G+DT GV+ R
Sbjct: 234 MIGRGSYGRPWFLGQVMQWWRGQPVSADPNVAGQYEIIRSHYEQMLEHYGADT-GVKMAR 292
Query: 56 RFL 58
+ L
Sbjct: 293 KHL 295
>gi|406884809|gb|EKD32149.1| hypothetical protein ACD_77C00169G0004 [uncultured bacterium]
Length = 324
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR +PWIF+EIK + + +++ E+ D+ K ++ +E G D GV R
Sbjct: 225 MIGRATYGRPWIFKEIKHYLSTGEHMLELTVEEKSDLAKRHLLKSVEVKG-DRVGVLEMR 283
Query: 56 RFLLEWLSFLHRYIPV 71
R L + L + P+
Sbjct: 284 RHLSAYFKALPDFKPI 299
>gi|359401662|ref|ZP_09194629.1| dihydrouridine synthase TIM-barrel protein nifR3 [Novosphingobium
pentaromativorans US6-1]
gi|357597002|gb|EHJ58753.1| dihydrouridine synthase TIM-barrel protein nifR3 [Novosphingobium
pentaromativorans US6-1]
Length = 338
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEI-----KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG+ +PW ++ + D + A +++I++ + LEH+G+DT GV+ R
Sbjct: 234 MIGRGSYGRPWFLGQVMQWWRGQPVSADPNVAGQYEIIRSHYEQMLEHYGADT-GVKMAR 292
Query: 56 RFL 58
+ L
Sbjct: 293 KHL 295
>gi|399889902|ref|ZP_10775779.1| putative TIM-barrel protein, nifR3 family [Clostridium arbusti
SL206]
Length = 322
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MI RG++ PWIF+EIK+ +++ S E+ D+ ++ +E++G + R V R+
Sbjct: 223 MIARGSMGNPWIFREIKQAFNGEEIIKPSIEEKIDMCISHLKLAVEYYG-ENRAVREMRK 281
Query: 57 FLLEWLSFLH 66
+ +L L
Sbjct: 282 NIAWYLKGLR 291
>gi|381186752|ref|ZP_09894322.1| tRNA dihydrouridine synthase B [Flavobacterium frigoris PS1]
gi|379651596|gb|EIA10161.1| tRNA dihydrouridine synthase B [Flavobacterium frigoris PS1]
Length = 298
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK + L + +R + ++ ++ + +E W + G+ TR
Sbjct: 194 MIGRAAIGYPWIFNEIKHYFKTGEHLAKPTVVDRVEAVRNHLTWAME-WKGERLGIVETR 252
Query: 56 RFLLEWLSFLHRYIP 70
+ +H + P
Sbjct: 253 PHYTNYFKGIHSFKP 267
>gi|332300620|ref|YP_004442541.1| nifR3 family TIM-barrel protein [Porphyromonas asaccharolytica DSM
20707]
gi|332177683|gb|AEE13373.1| TIM-barrel protein, nifR3 family [Porphyromonas asaccharolytica DSM
20707]
Length = 331
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKEK-----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GR A+ +PWIF E++ ++S ++ +ILKE V+ +E + RG+ +R
Sbjct: 225 MVGRAAIGQPWIFGEMRAAVDPTFTAPQLTSQQQLEILKEIVHKNIEKL-DERRGILHSR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|255036755|ref|YP_003087376.1| nifR3 family TIM-barrel protein [Dyadobacter fermentans DSM 18053]
gi|254949511|gb|ACT94211.1| TIM-barrel protein, nifR3 family [Dyadobacter fermentans DSM 18053]
Length = 329
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR + PWIF EIK +KL + +R D+ + ++ + + W GV R
Sbjct: 226 MIGRATIGNPWIFNEIKHYLKTGEKLPPPTMEQRVDVCRRHLEFSI-RWKGPVAGVFEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + L + P
Sbjct: 285 RHYTNYFKGLEHFKP 299
>gi|418721174|ref|ZP_13280358.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii str. UI
09149]
gi|410742241|gb|EKQ90990.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii str. UI
09149]
Length = 318
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF E+K+++L S +E DI+ ++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSEVKKEEL---SWSEILDIILQHARWMIEDYGEEF-GLLLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|239946645|ref|ZP_04698398.1| tRNA-dihydrouridine synthase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920921|gb|EER20945.1| tRNA-dihydrouridine synthase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 325
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 1 MIGRGALIKPWIFQEI-------KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVET 53
M+GRGA KPW+ +I KEK I AE+ DI+ E+ + L+++G ++ GV
Sbjct: 224 MVGRGAYGKPWLISQIDHYLKTGKEKSAPSI--AEQLDIVTEHYDAILDYYG-ESVGVPI 280
Query: 54 TRRFL 58
R+ +
Sbjct: 281 ARKHI 285
>gi|313885908|ref|ZP_07819648.1| TIM-barrel protein, nifR3 family [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924663|gb|EFR35432.1| TIM-barrel protein, nifR3 family [Porphyromonas asaccharolytica
PR426713P-I]
Length = 329
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKEK-----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GR A+ +PWIF E++ ++S ++ +ILKE V+ +E + RG+ +R
Sbjct: 225 MVGRAAIGQPWIFGEMRAAVDPTFTAPQLTSQQQLEILKEIVHKNIEKL-DERRGILHSR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|404403917|ref|ZP_10995501.1| tRNA-U20-dihydrouridine synthase [Alistipes sp. JC136]
Length = 333
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR +PWIF+E+K + + S ER I KE++ LE G D G+ R
Sbjct: 218 MIGRATYGRPWIFREVKHYLATGEVMPQPSVTERVAIAKEHLQKSLEIKG-DHIGILEMR 276
Query: 56 RFLLEWLSFLHRYIPVGL 73
R L + L + P L
Sbjct: 277 RHLTNYFKGLPDFKPTRL 294
>gi|300869979|ref|YP_003784850.1| dihydrouridine synthase like protein [Brachyspira pilosicoli
95/1000]
gi|300687678|gb|ADK30349.1| dihydrouridine synthase like, DUS like/ FMN binding domain protein
[Brachyspira pilosicoli 95/1000]
Length = 323
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFD--------ILKEYVNYGLEHWGSDTRGVE 52
M+GR A+ PW+F+E+ +FD +AE D +L E++N E +G + G+
Sbjct: 228 MVGRAAIGNPWVFREL--NTIFD-DNAEYNDDDTRNLKSVLIEHINGCCELYG-EVSGIH 283
Query: 53 TTRRFLLEWLS 63
R+F++++L+
Sbjct: 284 FMRKFIMKYLT 294
>gi|431806966|ref|YP_007233864.1| dihydrouridine synthase like protein [Brachyspira pilosicoli
P43/6/78]
gi|430780325|gb|AGA65609.1| dihydrouridine synthase like protein [Brachyspira pilosicoli
P43/6/78]
Length = 309
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFD--------ILKEYVNYGLEHWGSDTRGVE 52
M+GR A+ PW+F+E+ +FD +AE D +L E++N E +G + G+
Sbjct: 228 MVGRAAIGNPWVFREL--NTIFD-DNAEYNDDDTRNLKSVLIEHINGCCELYG-EVSGIH 283
Query: 53 TTRRFLLEWLS 63
R+F++++L+
Sbjct: 284 FMRKFIMKYLT 294
>gi|434382331|ref|YP_006704114.1| dihydrouridine synthase like protein [Brachyspira pilosicoli WesB]
gi|404430980|emb|CCG57026.1| dihydrouridine synthase like protein [Brachyspira pilosicoli WesB]
Length = 323
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFD--------ILKEYVNYGLEHWGSDTRGVE 52
M+GR A+ PW+F+E+ +FD +AE D +L E++N E +G + G+
Sbjct: 228 MVGRAAIGNPWVFREL--NTIFD-DNAEYNDDDTRNLKSVLIEHINGCCELYG-EVSGIH 283
Query: 53 TTRRFLLEWLS 63
R+F++++L+
Sbjct: 284 FMRKFIMKYLT 294
>gi|325281330|ref|YP_004253872.1| TIM-barrel protein, nifR3 family [Odoribacter splanchnicus DSM
20712]
gi|324313139|gb|ADY33692.1| TIM-barrel protein, nifR3 family [Odoribacter splanchnicus DSM
20712]
Length = 333
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR + PWIF++I+ + L D+S E+ +++KE + +E W + RG+ R
Sbjct: 225 MIGRATIGHPWIFKQIRHYFETGELLPDLSVKEQIEVIKEQILLSVE-WIDEVRGLLHMR 283
Query: 56 RFL 58
R +
Sbjct: 284 RHM 286
>gi|239608766|gb|EEQ85753.1| acyl-CoA oxidase [Ajellomyces dermatitidis ER-3]
Length = 563
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 QEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRF 57
Q E+K I AERF+IL Y L H GS+ RG+ETT F
Sbjct: 100 QMTDEQKAVWIPKAERFEILGSYAQTELSH-GSNVRGLETTATF 142
>gi|404476310|ref|YP_006707741.1| dihydrouridine synthase like protein [Brachyspira pilosicoli B2904]
gi|404437799|gb|AFR70993.1| dihydrouridine synthase like protein [Brachyspira pilosicoli B2904]
Length = 323
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFD--------ILKEYVNYGLEHWGSDTRGVE 52
M+GR A+ PW+F+E+ +FD +AE D +L E++N E +G + G+
Sbjct: 228 MVGRAAIGNPWVFREL--NTIFD-DNAEYNDDDTRNLKSVLIEHINGCCELYG-EVSGIH 283
Query: 53 TTRRFLLEWLS 63
R+F++++L+
Sbjct: 284 FMRKFIMKYLT 294
>gi|338999872|ref|ZP_08638508.1| hypothetical protein GME_17492 [Halomonas sp. TD01]
gi|338763293|gb|EGP18289.1| hypothetical protein GME_17492 [Halomonas sp. TD01]
Length = 346
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA PWIFQ+I + L + ER ++LKE++ L + +T GV R
Sbjct: 230 MIGRGAQGNPWIFQQITHYLAHGELLTPPTLDERRNVLKEHLQ-ALHTFYGETMGVRIAR 288
Query: 56 RFL 58
+ L
Sbjct: 289 KHL 291
>gi|383451781|ref|YP_005358502.1| tRNA-dihydrouridine synthase [Flavobacterium indicum GPTSA100-9]
gi|380503403|emb|CCG54445.1| Probable tRNA-dihydrouridine synthase [Flavobacterium indicum
GPTSA100-9]
Length = 331
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK + L + A+R + + ++ + +E W + G+ R
Sbjct: 226 MIGRAAIGYPWIFNEIKHFFETGEHLAPPTVADRVEAARNHLIWSME-WKGERVGIVEMR 284
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTS 99
R + +H G E QK+ G NEL L +
Sbjct: 285 RHYTNYFKGIH-----GFKECKQKLVTT----DGHNELMDLFET 319
>gi|402496694|ref|YP_006555954.1| tRNA-dihydrouridine synthase [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649967|emb|CCF78137.1| tRNA-dihydrouridine synthase [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 321
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRG KPW+ + I K+ + ++ E+ I+ E+ + LE++G DT G++ R+
Sbjct: 226 MIGRGTYGKPWLINQAMNFISGSKISEPTALEKLSIILEHYDSVLEYYGKDT-GMKIARK 284
Query: 57 FL 58
+
Sbjct: 285 HI 286
>gi|294011661|ref|YP_003545121.1| tRNA-dihydrouridine synthase [Sphingobium japonicum UT26S]
gi|292674991|dbj|BAI96509.1| tRNA-dihydrouridine synthase [Sphingobium japonicum UT26S]
Length = 339
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ ++L D S E++ ++ E+ LEH+ + T GV R
Sbjct: 228 MIGRGAYGRPWLIGQVMHWFRTGQRLADPSLEEQYRVITEHYRAMLEHYDNHT-GVNMAR 286
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + W + + +P G E +NQ P
Sbjct: 287 KH-IGWYT---KGLP-GSAEFRNAVNQEP 310
>gi|33151668|ref|NP_873021.1| dehydrogenase [Haemophilus ducreyi 35000HP]
gi|38604734|sp|Q7VNP2.1|DUSB_HAEDU RecName: Full=tRNA-dihydrouridine synthase B
gi|33147889|gb|AAP95410.1| putative dehydrogenase [Haemophilus ducreyi 35000HP]
Length = 320
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRG+ +PW+FQE+K+ + D+S E+ ++ +++ L H+ + +G R+
Sbjct: 222 MIGRGSFGRPWLFQELKQFLETGDIIDLSIDEKCQLMLKHIE-DLHHFYGEQKGYRIARK 280
Query: 57 FL 58
+
Sbjct: 281 HV 282
>gi|88607437|ref|YP_505166.1| putative tRNA-dihydrouridine synthase [Anaplasma phagocytophilum
HZ]
gi|88598500|gb|ABD43970.1| putative tRNA-dihydrouridine synthase [Anaplasma phagocytophilum
HZ]
Length = 315
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLF-DISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA KPW+ ++ +K ++ + + +E+ I+ ++ +Y L+++G D GV+ R
Sbjct: 217 MIGRGAYGKPWLIKQALSFMKNSEILPEPTKSEKLAIILDHYDYALDYYGKDL-GVKILR 275
Query: 56 RFL 58
+ L
Sbjct: 276 KHL 278
>gi|282879049|ref|ZP_06287809.1| TIM-barrel protein, nifR3 family [Prevotella buccalis ATCC 35310]
gi|281298783|gb|EFA91192.1| TIM-barrel protein, nifR3 family [Prevotella buccalis ATCC 35310]
Length = 329
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIK---EKKLFDISSA--ERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GR A +PWIF+E++ + K +D S ++ DILKE ++ + + RG+ TR
Sbjct: 225 MVGRAAFGQPWIFKEMRDYLDGKPYDASLGINKKIDILKEQLHINVSRI-DEYRGILHTR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|187479247|ref|YP_787272.1| tRNA-dihydrouridine synthase B [Bordetella avium 197N]
gi|115423834|emb|CAJ50385.1| tRNA-dihydrouridine synthase B [Bordetella avium 197N]
Length = 341
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A +PWIF+EI + L S AE D+L E+++ +G T GV T R
Sbjct: 225 MIGRAAQGRPWIFREIDHFLRTGETLAPPSHAEMRDLLLEHLDDHYRFYGEHT-GVRTAR 283
Query: 56 RFL 58
+ +
Sbjct: 284 KHI 286
>gi|431796902|ref|YP_007223806.1| TIM-barrel protein, nifR3 family [Echinicola vietnamensis DSM
17526]
gi|430787667|gb|AGA77796.1| putative TIM-barrel protein, nifR3 family [Echinicola vietnamensis
DSM 17526]
Length = 333
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK +KL ER ++ K+++++ ++ W + G+ R
Sbjct: 226 MIGRAAIGYPWIFNEIKHYFETGQKLAAPGLDERINVAKKHLDFSVK-WKGEKLGILEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFRGMPNFKP 299
>gi|87199943|ref|YP_497200.1| dihydrouridine synthase TIM-barrel protein nifR3 [Novosphingobium
aromaticivorans DSM 12444]
gi|87135624|gb|ABD26366.1| tRNA-U20-dihydrouridine synthase [Novosphingobium aromaticivorans
DSM 12444]
Length = 351
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG+ +PW+ +I ++L D AE++ ++ E+ + EH+G T GV R
Sbjct: 234 MIGRGSYGRPWLLGQIMHWLDTGERLADPPLAEQYALIVEHYHAMQEHYGEMT-GVNMAR 292
Query: 56 RFLLEWLSFLH 66
+ L + LH
Sbjct: 293 KHLGWYTKGLH 303
>gi|373501507|ref|ZP_09591858.1| hypothetical protein HMPREF9140_01976 [Prevotella micans F0438]
gi|371948160|gb|EHO66047.1| hypothetical protein HMPREF9140_01976 [Prevotella micans F0438]
Length = 324
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
MIGR PWIF+ E D++ E+ D+LKE + +E + RG+ TRR L
Sbjct: 225 MIGRATFGCPWIFRSPNEP---DLTIDEKIDVLKEMLRINVERI-DEYRGILHTRRHL 278
>gi|397691749|ref|YP_006529003.1| TIM-barrel protein, nifR3 family [Melioribacter roseus P3M]
gi|395813241|gb|AFN75990.1| TIM-barrel protein, nifR3 family [Melioribacter roseus P3M]
Length = 331
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MI RGA+ +PWIF+E KE + F+ + +RF+I ++ Y +E + + R
Sbjct: 223 MIARGAIERPWIFREAKELLEYGEIKFEDTPEKRFEIALRHLKYSIELKNDERTAIIPFR 282
Query: 56 RFLLEWLSFL 65
+F W +L
Sbjct: 283 KF---WSGYL 289
>gi|440785133|ref|ZP_20962083.1| putative TIM-barrel protein, nifR3 family [Clostridium pasteurianum
DSM 525]
gi|440218505|gb|ELP57725.1| putative TIM-barrel protein, nifR3 family [Clostridium pasteurianum
DSM 525]
Length = 323
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
M+ RGAL PWIF+E IK K++ S E+ D+ ++ ++++G + + V R+
Sbjct: 223 MVARGALGNPWIFREINQAIKGKQIIKPSIEEKVDLCINHLKLAIDYYG-ENKAVREMRK 281
>gi|390169603|ref|ZP_10221537.1| tRNA-dihydrouridine synthase [Sphingobium indicum B90A]
gi|389587877|gb|EIM65938.1| tRNA-dihydrouridine synthase [Sphingobium indicum B90A]
Length = 339
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ ++L D S E++ ++ E+ LEH+ + T GV R
Sbjct: 228 MIGRGAYGRPWLIGQVMHWFRTGERLADPSLEEQYRVITEHYRAMLEHYDNHT-GVNMAR 286
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + W + + +P G E +NQ P
Sbjct: 287 KH-IGWYT---KGLP-GSAEFRNAVNQEP 310
>gi|340347248|ref|ZP_08670360.1| tRNA-dihydrouridine synthase [Prevotella dentalis DSM 3688]
gi|433652443|ref|YP_007278822.1| putative TIM-barrel protein, nifR3 family [Prevotella dentalis DSM
3688]
gi|339609818|gb|EGQ14681.1| tRNA-dihydrouridine synthase [Prevotella dentalis DSM 3688]
gi|433302976|gb|AGB28792.1| putative TIM-barrel protein, nifR3 family [Prevotella dentalis DSM
3688]
Length = 334
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 1 MIGRGALIKPWIFQEIKEK-KLFDISSA-----ERFDILKEYVNYGLEHWGSDTRGVETT 54
MIGR +PWIF+E+K+ L D + E+ D+L+E + +E + RG+ T
Sbjct: 225 MIGRATFGRPWIFKEVKDGMALGDAARTSLTLDEKIDVLEEQLRINVERI-DEYRGILHT 283
Query: 55 RRFL 58
RR L
Sbjct: 284 RRHL 287
>gi|257460864|ref|ZP_05625965.1| tRNA-dihydrouridine synthase B [Campylobacter gracilis RM3268]
gi|257442195|gb|EEV17337.1| tRNA-dihydrouridine synthase B [Campylobacter gracilis RM3268]
Length = 308
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGR + +PWIF+EIK + S A + +++ + L H+G RGV R+ L E
Sbjct: 220 MIGRAVIGRPWIFREIKTGE--QASDALKKEVVLYHFAQMLSHYG--VRGVAIFRKHLHE 275
Query: 61 W 61
+
Sbjct: 276 Y 276
>gi|384209110|ref|YP_005594830.1| dihydrouridine synthase-like FMN-binding domain-containing protein
[Brachyspira intermedia PWS/A]
gi|343386760|gb|AEM22250.1| Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein
[Brachyspira intermedia PWS/A]
Length = 323
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 1 MIGRGALIKPWIFQEI----KEKKLFDISSAERF-DILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA+ PWIF E+ ++ + + + +I++E+++ E +G + G+ R
Sbjct: 228 MVGRGAIGNPWIFAELNTIFEDNDEYKLKEEDNLKNIIREHIDGCCELYG-EISGIHFMR 286
Query: 56 RFLLEWLS 63
+F++++L+
Sbjct: 287 KFIMKYLT 294
>gi|219847108|ref|YP_002461541.1| nifR3 family TIM-barrel protein [Chloroflexus aggregans DSM 9485]
gi|219541367|gb|ACL23105.1| TIM-barrel protein, nifR3 family [Chloroflexus aggregans DSM 9485]
Length = 351
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYV 37
MIGRGA+ PWIF+++ + + F+ + A+++ +L EY+
Sbjct: 239 MIGRGAIANPWIFRQVADLRQGRTPFEPTPADKYHLLLEYM 279
>gi|288958350|ref|YP_003448691.1| tRNA-dihydrouridine synthase B [Azospirillum sp. B510]
gi|288910658|dbj|BAI72147.1| tRNA-dihydrouridine synthase B [Azospirillum sp. B510]
Length = 340
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG+ +PW ++ ++L D E+ DIL E+ + L H+GSD G++ R
Sbjct: 236 MIGRGSYGRPWFPSQVMRYLRTGERLPDPPLHEQMDILLEHFDSMLSHYGSDG-GIKVAR 294
Query: 56 RFLLEWLS 63
+ + W S
Sbjct: 295 KH-VSWYS 301
>gi|334365927|ref|ZP_08514876.1| TIM-barrel protein, nifR3 family [Alistipes sp. HGB5]
gi|313158033|gb|EFR57439.1| TIM-barrel protein, nifR3 family [Alistipes sp. HGB5]
Length = 340
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR +PWIF+E+K + L S ER +I KE++ LE G + G+ R
Sbjct: 225 MIGRATYGRPWIFREVKHYLATGEVLPQPSVCERVEIAKEHLRKSLEVKG-EFVGILEMR 283
Query: 56 RFLLEWLSFLHRYIPVGL 73
R L + L + P L
Sbjct: 284 RHLSNYFKGLPDFKPTRL 301
>gi|154175306|ref|YP_001408795.1| dihydrouridine synthase (Dus) superfamily protein [Campylobacter
curvus 525.92]
gi|402546075|ref|ZP_10842953.1| dihydrouridine synthase [Campylobacter sp. FOBRC14]
gi|112803746|gb|EAU01090.1| dihydrouridine synthase (Dus) superfamily [Campylobacter curvus
525.92]
gi|401017587|gb|EJP76345.1| dihydrouridine synthase [Campylobacter sp. FOBRC14]
Length = 307
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGR ++ PW+F EIK K+ +S + +I+ + + LEH+G G R+ L +
Sbjct: 219 MIGRASIGSPWVFSEIKNKQ--GVSKELKKEIILAHFDAMLEHYGE--HGANIFRKHLHQ 274
Query: 61 W 61
+
Sbjct: 275 Y 275
>gi|390947992|ref|YP_006411752.1| tRNA-U20-dihydrouridine synthase [Alistipes finegoldii DSM 17242]
gi|390424561|gb|AFL79067.1| tRNA-U20-dihydrouridine synthase [Alistipes finegoldii DSM 17242]
Length = 340
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR +PWIF+E+K + L S ER +I KE++ LE G + G+ R
Sbjct: 225 MIGRATYGRPWIFREVKHYLATGEVLPQPSVCERVEIAKEHLRKSLEVKG-EFVGILEMR 283
Query: 56 RFLLEWLSFLHRYIPVGL 73
R L + L + P L
Sbjct: 284 RHLSNYFKGLPDFKPTRL 301
>gi|261204009|ref|XP_002629218.1| acyl-Coenzyme A oxidase subunit 2 [Ajellomyces dermatitidis
SLH14081]
gi|239587003|gb|EEQ69646.1| acyl-Coenzyme A oxidase subunit 2 [Ajellomyces dermatitidis
SLH14081]
Length = 550
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 QEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRF 57
Q E+K I AERF+IL Y L H GS+ RG+ETT F
Sbjct: 106 QMTDEQKAVWIPKAERFEILGSYAQTELGH-GSNVRGLETTATF 148
>gi|383315686|ref|YP_005376528.1| putative TIM-barrel protein, nifR3 family [Frateuria aurantia DSM
6220]
gi|379042790|gb|AFC84846.1| putative TIM-barrel protein, nifR3 family [Frateuria aurantia DSM
6220]
Length = 331
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A +PWIF+EI K+L +S AE IL E++ +G +T GV R
Sbjct: 222 MIGRAAQGRPWIFREISHFLATGKELPPLSPAEAGAILHEHLLQLYAFYGEET-GVRIAR 280
Query: 56 RFL 58
+ L
Sbjct: 281 KHL 283
>gi|452125840|ref|ZP_21938423.1| tRNA-dihydrouridine synthase B [Bordetella holmesii F627]
gi|452129202|ref|ZP_21941778.1| tRNA-dihydrouridine synthase B [Bordetella holmesii H558]
gi|451920935|gb|EMD71080.1| tRNA-dihydrouridine synthase B [Bordetella holmesii F627]
gi|451925072|gb|EMD75212.1| tRNA-dihydrouridine synthase B [Bordetella holmesii H558]
Length = 341
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A +PWIF+E+ + L S AE D+L E+++ +G T GV T R
Sbjct: 225 MIGRAAQGRPWIFREVDHFLRTGQTLAAPSYAEMRDLLLEHLDDHYRFYGEHT-GVRTAR 283
Query: 56 RFL 58
+ +
Sbjct: 284 KHI 286
>gi|410027567|ref|ZP_11277403.1| tRNA-U20-dihydrouridine synthase [Marinilabilia sp. AK2]
Length = 329
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PW+F EIK +KL ER ++ K+++++ ++ W + +G+ R
Sbjct: 226 MIGRASIGYPWVFNEIKHYFETGEKLAGPDLDERINVTKKHLDFSVK-WKGEKQGILEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFRGMPNFKP 299
>gi|148655022|ref|YP_001275227.1| nifR3 family TIM-barrel protein [Roseiflexus sp. RS-1]
gi|148567132|gb|ABQ89277.1| putative TIM-barrel protein, nifR3 family [Roseiflexus sp. RS-1]
Length = 349
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 1 MIGRGALIKPWIFQEIKEKKL----FDISSAERFDILKEYV 37
MIGRGA+ PWIF++I + + ++ A+++D L Y+
Sbjct: 245 MIGRGAMHNPWIFRQIAQLRTGMQPMTVTPADKYDFLTRYL 285
>gi|383788908|ref|YP_005473477.1| putative tRNA-dihydrouridine synthase [Caldisericum exile AZM16c01]
gi|381364545|dbj|BAL81374.1| putative tRNA-dihydrouridine synthase [Caldisericum exile AZM16c01]
Length = 326
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGR + +PW + +KE DI + E+ DI+ ++ +E +G + VE +
Sbjct: 221 MIGRATIGRPWFLKSSYKFLKENIKLDIPNKEKIDIIVRHIESAVEFYGEEKGIVEMRKH 280
Query: 57 FL 58
F+
Sbjct: 281 FI 282
>gi|327355450|gb|EGE84307.1| acyl-Coenzyme A oxidase subunit 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 569
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 QEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRF 57
Q E+K I AERF+IL Y L H GS+ RG+ETT F
Sbjct: 106 QMTDEQKAVWIPKAERFEILGSYAQTELGH-GSNVRGLETTATF 148
>gi|399926332|ref|ZP_10783690.1| tRNA-dihydrouridine synthase [Myroides injenensis M09-0166]
Length = 330
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK + L + +R D K ++ + +E W + G+ R
Sbjct: 226 MIGRAAIGYPWIFDEIKHFFKTGEILAPPTIKDRLDAAKNHLIWSME-WKGERLGIVEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + +H + P
Sbjct: 285 RHYTNYFKGIHGFKP 299
>gi|409097216|ref|ZP_11217240.1| nifR3 family TIM-barrel protein [Pedobacter agri PB92]
Length = 335
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF+E+K + L + ER D+ + +++ LE W G+ R
Sbjct: 227 MIGRAAIGYPWIFREVKHFFKTGEHLPGPTIEERIDVCRTHLDKSLE-WKGPKTGIFEMR 285
Query: 56 RFLLEWLSFLHRYIP 70
R + L + P
Sbjct: 286 RHYANYFKGLPDFKP 300
>gi|418735567|ref|ZP_13291977.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748701|gb|EKR01595.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 318
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF E+K+++L S +E DI+ ++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSEVKKEEL---SWSEISDIILQHARWMIEDYGEEF-GLLLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|381203281|ref|ZP_09910388.1| tRNA-dihydrouridine synthase [Sphingobium yanoikuyae XLDN2-5]
Length = 340
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA KPW+ ++ ++ D S AE+++++ E+ L+H+ + T GV R
Sbjct: 229 MIGRGAYGKPWLLGQVMHWFATGERRADPSLAEQYNLITEHYRMMLDHYDNMT-GVNMAR 287
Query: 56 RFL 58
+ +
Sbjct: 288 KHI 290
>gi|427411892|ref|ZP_18902094.1| tRNA dihydrouridine synthase A [Sphingobium yanoikuyae ATCC 51230]
gi|425710182|gb|EKU73205.1| tRNA dihydrouridine synthase A [Sphingobium yanoikuyae ATCC 51230]
Length = 340
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA KPW+ ++ ++ D S AE+++++ E+ L+H+ + T GV R
Sbjct: 229 MIGRGAYGKPWLLGQVMHWFATGERRADPSLAEQYNLITEHYRMMLDHYDNMT-GVNMAR 287
Query: 56 RFL 58
+ +
Sbjct: 288 KHI 290
>gi|116326862|ref|YP_796582.1| tRNA-dihydrouridine synthase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116329809|ref|YP_799527.1| tRNA-dihydrouridine synthase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116119606|gb|ABJ77649.1| tRNA-dihydrouridine synthase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116123498|gb|ABJ74769.1| tRNA-dihydrouridine synthase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 318
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF E+K+++L S +E DI+ ++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSEVKKEEL---SWSEISDIILQHARWMIEDYGEEF-GLLLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|421095654|ref|ZP_15556367.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii str.
200801926]
gi|410362364|gb|EKP13404.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii str.
200801926]
gi|456887416|gb|EMF98462.1| TIM-barrel protein, nifR3 family [Leptospira borgpetersenii str.
200701203]
Length = 318
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF E+K+++L S +E DI+ ++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSEVKKEEL---SWSEISDIILQHARWMIEDYGEEF-GLLLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|365153616|ref|ZP_09350055.1| hypothetical protein HMPREF1019_00738 [Campylobacter sp. 10_1_50]
gi|363651628|gb|EHL90686.1| hypothetical protein HMPREF1019_00738 [Campylobacter sp. 10_1_50]
Length = 307
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGR ++ PWIF EIK K D A + +I+ + + +EH+G G+ R+ L +
Sbjct: 219 MIGRASIGNPWIFHEIKTKTSVD--KALKQEIILAHFDAMIEHYGE--HGLCIFRKHLHQ 274
Query: 61 W 61
+
Sbjct: 275 Y 275
>gi|326335679|ref|ZP_08201865.1| tRNA-dihydrouridine synthase B [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325692108|gb|EGD34061.1| tRNA-dihydrouridine synthase B [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 326
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK+ +K+ + ++R D+ +++ + +E W + G+ TR
Sbjct: 226 MIGRAAIGYPWIFHEIKQYLATGEKVAPPTLSQRADVALQHLLWAVE-WKGERLGILETR 284
Query: 56 R 56
R
Sbjct: 285 R 285
>gi|103486763|ref|YP_616324.1| dihydrouridine synthase TIM-barrel protein nifR3 [Sphingopyxis
alaskensis RB2256]
gi|98976840|gb|ABF52991.1| Dihydrouridine synthase TIM-barrel protein nifR3 [Sphingopyxis
alaskensis RB2256]
Length = 332
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEI-----KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ E + D E++D++ + ++H+G +T GV R
Sbjct: 228 MIGRGAYGRPWLLGQVMAALRGEGERPDPGLDEQYDVITSHYRAMIDHYG-ETTGVNMAR 286
Query: 56 RFL 58
+ L
Sbjct: 287 KHL 289
>gi|336323620|ref|YP_004603587.1| dihydrouridine synthase DuS [Flexistipes sinusarabici DSM 4947]
gi|336107201|gb|AEI15019.1| dihydrouridine synthase DuS [Flexistipes sinusarabici DSM 4947]
Length = 325
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFD--ISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
MIGR + PWIFQ ++E K + +S E +++L E ++ E G+
Sbjct: 230 MIGRAIMKTPWIFQALRENKHPENFLSKQELYNLLMELKDFEYEEKGA------------ 277
Query: 59 LEWLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSN 101
+++ L +Y S N R +Y NE E+L N
Sbjct: 278 -HYINLLKKYAVFFSKSSPGASNFRNRLYSTNNEKESLKIIEN 319
>gi|392390991|ref|YP_006427594.1| tRNA-U20-dihydrouridine synthase [Ornithobacterium rhinotracheale
DSM 15997]
gi|390522069|gb|AFL97800.1| tRNA-U20-dihydrouridine synthase [Ornithobacterium rhinotracheale
DSM 15997]
Length = 326
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF+EIK + L + AER D +K+++ + E W + G+ R
Sbjct: 226 MIGRAAIGYPWIFREIKHYLKTGELLAPPTIAERVDAVKKHLEFSCE-WKGEKVGILEMR 284
Query: 56 RFLLEWLSFLHRY 68
+ + + +
Sbjct: 285 KHYSNYFKGIQHF 297
>gi|281422351|ref|ZP_06253350.1| tRNA-dihydrouridine synthase B [Prevotella copri DSM 18205]
gi|281403582|gb|EFB34262.1| tRNA-dihydrouridine synthase B [Prevotella copri DSM 18205]
Length = 328
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGR +PWIF+EI++ ++ E+ D+L+E + +E + RG+ TRR
Sbjct: 225 MIGRATFGRPWIFKEIRDYLDNTGAAPLTVDEKIDLLEEQLRINVERI-DEYRGILHTRR 283
Query: 57 FL 58
L
Sbjct: 284 HL 285
>gi|315453289|ref|YP_004073559.1| tRNA Dihydrouridine synthase [Helicobacter felis ATCC 49179]
gi|315132341|emb|CBY82969.1| tRNA Dihydrouridine synthase [Helicobacter felis ATCC 49179]
Length = 332
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGR +LIKPWIF +IK ++ + D++ E+ + +E +G RGV R+ L
Sbjct: 224 MIGRASLIKPWIFWQIKHNTQ-ELPPVLKKDLVLEHFDKMVEFYG--VRGVVMFRKNLHA 280
Query: 61 W 61
+
Sbjct: 281 Y 281
>gi|295660010|ref|XP_002790562.1| acyl-coenzyme A oxidase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281437|gb|EEH37003.1| acyl-coenzyme A oxidase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 653
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 14 QEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRF 57
Q E+K I AERF+IL Y L H GS+ RG+ETT F
Sbjct: 108 QMTDEQKAIWIPKAERFEILGSYAQTELGH-GSNLRGLETTATF 150
>gi|189502204|ref|YP_001957921.1| hypothetical protein Aasi_0818 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497645|gb|ACE06192.1| hypothetical protein Aasi_0818 [Candidatus Amoebophilus asiaticus
5a2]
Length = 327
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIFQEIK ++L ER L++++ + ++ W + G+ R
Sbjct: 226 MIGRASIGYPWIFQEIKHFFKTGEQLAPPDLQERIATLQKHLQHAIQ-WKGERTGILEMR 284
Query: 56 RFLLEWLSFL 65
R +L L
Sbjct: 285 RHYTNYLKGL 294
>gi|357974360|ref|ZP_09138331.1| nifR3 family TIM-barrel protein [Sphingomonas sp. KC8]
Length = 337
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ +KL D + E++ ++ ++ L+H+G T GV R
Sbjct: 233 MIGRGAYGRPWLLHQVMHWLETGQKLPDPTIDEQYRVITDHYRSMLDHYGEFT-GVNMAR 291
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + + + +P G E +NQ P
Sbjct: 292 KH----IGWYTKGLP-GSAEFRNTVNQTP 315
>gi|268679177|ref|YP_003303608.1| dihydrouridine synthase [Sulfurospirillum deleyianum DSM 6946]
gi|268617208|gb|ACZ11573.1| dihydrouridine synthase DuS [Sulfurospirillum deleyianum DSM 6946]
Length = 312
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
MIGRGAL PWIF ++K L + + +I+ E+ + +E +G +GV R+ L
Sbjct: 222 MIGRGALGNPWIFYQLK-NGLHHVEKTKILEIVLEHYDAMVEFYGE--KGVSIFRKHL 276
>gi|126176129|ref|YP_001052278.1| nifR3 family TIM-barrel protein [Shewanella baltica OS155]
gi|153002467|ref|YP_001368148.1| nifR3 family TIM-barrel protein [Shewanella baltica OS185]
gi|160877184|ref|YP_001556500.1| NifR3 family TIM-barrel protein [Shewanella baltica OS195]
gi|217975034|ref|YP_002359785.1| nifR3 family TIM-barrel protein [Shewanella baltica OS223]
gi|373951230|ref|ZP_09611191.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS183]
gi|378710399|ref|YP_005275293.1| nifR3 family TIM-barrel protein [Shewanella baltica OS678]
gi|386322951|ref|YP_006019068.1| nifR3 family TIM-barrel protein [Shewanella baltica BA175]
gi|386342884|ref|YP_006039250.1| nifR3 family TIM-barrel protein [Shewanella baltica OS117]
gi|418022516|ref|ZP_12661503.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS625]
gi|125999334|gb|ABN63409.1| putative TIM-barrel protein, nifR3 family [Shewanella baltica
OS155]
gi|151367085|gb|ABS10085.1| putative TIM-barrel protein, nifR3 family [Shewanella baltica
OS185]
gi|160862706|gb|ABX51240.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS195]
gi|217500169|gb|ACK48362.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS223]
gi|315269388|gb|ADT96241.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS678]
gi|333817096|gb|AEG09762.1| TIM-barrel protein, nifR3 family [Shewanella baltica BA175]
gi|334865285|gb|AEH15756.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS117]
gi|353538741|gb|EHC08296.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS625]
gi|373887830|gb|EHQ16722.1| TIM-barrel protein, nifR3 family [Shewanella baltica OS183]
Length = 322
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PWIF+EI+ KL I AE+ ++ E++ + +G + +G+ R
Sbjct: 222 MIGRGAQGRPWIFREIQHYLETGNKLAPIEVAEQRQVMLEHLTKLYDLYG-EYKGIRFAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHM 283
>gi|390443019|ref|ZP_10230818.1| tRNA-u20-dihydrouridine synthase [Nitritalea halalkaliphila LW7]
gi|389667327|gb|EIM78750.1| tRNA-u20-dihydrouridine synthase [Nitritalea halalkaliphila LW7]
Length = 153
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIF EIK +KL + R I ++++++ +E W D G+ R
Sbjct: 49 MIGRASIGYPWIFNEIKHFFATGEKLAPPTLEARLAIARKHLDFSIE-WKGDKLGILEMR 107
Query: 56 RFLLEWL 62
R +
Sbjct: 108 RHYTNYF 114
>gi|384097172|ref|ZP_09998293.1| putative tRNA-dihydrouridine synthase 1 [Imtechella halotolerans
K1]
gi|383837140|gb|EID76540.1| putative tRNA-dihydrouridine synthase 1 [Imtechella halotolerans
K1]
Length = 330
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK +KL + +R + + ++ + +E W + GV TR
Sbjct: 226 MIGRAAIGYPWIFNEIKHFFKTGEKLATPTINDRVEAARNHLTWAIE-WKGEKLGVFETR 284
Query: 56 R 56
R
Sbjct: 285 R 285
>gi|154489885|ref|ZP_02030146.1| hypothetical protein PARMER_00114 [Parabacteroides merdae ATCC
43184]
gi|423346346|ref|ZP_17324034.1| hypothetical protein HMPREF1060_01706 [Parabacteroides merdae
CL03T12C32]
gi|423722902|ref|ZP_17697055.1| hypothetical protein HMPREF1078_01115 [Parabacteroides merdae
CL09T00C40]
gi|154089327|gb|EDN88371.1| TIM-barrel protein, nifR3 family [Parabacteroides merdae ATCC
43184]
gi|409221144|gb|EKN14097.1| hypothetical protein HMPREF1060_01706 [Parabacteroides merdae
CL03T12C32]
gi|409242175|gb|EKN34940.1| hypothetical protein HMPREF1078_01115 [Parabacteroides merdae
CL09T00C40]
Length = 343
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKEK-KLFDISSAERF----DILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG++ +PWIF+E++ + AE F DILK+ V +E + RG+ R
Sbjct: 225 MIGRGSIGRPWIFREVRHYLDTGETLPAESFSWYLDILKKQVEQSVERL-DERRGILHIR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|398383004|ref|ZP_10541081.1| putative TIM-barrel protein, nifR3 family [Sphingobium sp. AP49]
gi|397725714|gb|EJK86162.1| putative TIM-barrel protein, nifR3 family [Sphingobium sp. AP49]
Length = 340
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ ++ D S AE++D++ ++ L+H+ + T GV R
Sbjct: 229 MIGRGAYGRPWLLGQVMHWFATGERRDDPSLAEQYDLITDHYRMMLDHYDNLT-GVNMAR 287
Query: 56 RFL 58
+ +
Sbjct: 288 KHI 290
>gi|24371990|ref|NP_716032.1| tRNA-dihydrouridine synthase DusB [Shewanella oneidensis MR-1]
gi|38604872|sp|Q8EJR8.1|DUSB_SHEON RecName: Full=tRNA-dihydrouridine synthase B
gi|24345845|gb|AAN53477.1| tRNA-dihydrouridine synthase DusB [Shewanella oneidensis MR-1]
Length = 322
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PWIF+EI+ KL I AE+ ++ E++ + +G + +G+ R
Sbjct: 222 MIGRGAQGRPWIFREIQHYLETGNKLAPIEVAEQRQVMLEHLTKLYDLYG-EYKGIRFAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHI 283
>gi|58584719|ref|YP_198292.1| tRNA-dihydrouridine synthase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419035|gb|AAW71050.1| tRNA-dihydrouridine synthase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 310
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQE----IKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRGA +PW+ + + ++ + +++E+ I+ E+ + LE++G+D G++ R+
Sbjct: 213 MIGRGAYGRPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDA-GIKIARK 271
Query: 57 FL 58
+
Sbjct: 272 HI 273
>gi|334344351|ref|YP_004552903.1| TIM-barrel fold family protein [Sphingobium chlorophenolicum L-1]
gi|334100973|gb|AEG48397.1| TIM-barrel protein, nifR3 family [Sphingobium chlorophenolicum L-1]
Length = 339
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PW+ ++ ++L D S E++ ++ E+ L+H+ + T GV R
Sbjct: 228 MIGRGAYGRPWLIGQVMHWFRTGERLADPSLEEQYGLITEHYRAMLDHYDNHT-GVNMAR 286
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQRP 84
+ + W + + +P G E +NQ P
Sbjct: 287 KH-IGWYT---KGLP-GSAEFRNAVNQEP 310
>gi|383649565|ref|ZP_09959971.1| dihydrouridine synthase TIM-barrel protein nifR3 [Sphingomonas
elodea ATCC 31461]
Length = 332
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 1 MIGRGALIKPWIFQEIKEK-----KLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA KPWI +++ + + + E++ ++ E+ L H+G++ GV R
Sbjct: 228 MIGRGAYGKPWILRQVMDALTGKGDRPEPTIEEQYRVITEHYIETLAHYGNEV-GVNMMR 286
Query: 56 RFLLEWLSFLHRYIPVGLLESTQKMNQ 82
+ L + LH G E K+NQ
Sbjct: 287 KHLGWYTKGLH-----GSAEFRNKVNQ 308
>gi|374375096|ref|ZP_09632754.1| tRNA-U20-dihydrouridine synthase [Niabella soli DSM 19437]
gi|373231936|gb|EHP51731.1| tRNA-U20-dihydrouridine synthase [Niabella soli DSM 19437]
Length = 346
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF+EIK + L + ER ++++++ +E W G+ R
Sbjct: 226 MIGRAAIGYPWIFREIKHFMKTGETLAPPTVEERVSVVRKHLQKSVE-WKGPIVGINEMR 284
Query: 56 RFLLEWLSFL 65
R +L L
Sbjct: 285 RHYANYLKGL 294
>gi|399030237|ref|ZP_10730743.1| putative TIM-barrel protein, nifR3 family [Flavobacterium sp.
CF136]
gi|398071743|gb|EJL62990.1| putative TIM-barrel protein, nifR3 family [Flavobacterium sp.
CF136]
Length = 330
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK + L + A+R + + ++ + ++ W + G+ R
Sbjct: 226 MIGRAAIGYPWIFNEIKHFFKTGEHLPSPTVADRVEAARNHLQWSMD-WKGERLGIVEMR 284
Query: 56 RFLLEWLSFLHRY 68
R + +H +
Sbjct: 285 RHYTNYFKGIHSF 297
>gi|406661147|ref|ZP_11069271.1| putative tRNA-dihydrouridine synthase [Cecembia lonarensis LW9]
gi|405555089|gb|EKB50139.1| putative tRNA-dihydrouridine synthase [Cecembia lonarensis LW9]
Length = 329
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PW+F EIK KL ER + K+++++ ++ W + +G+ R
Sbjct: 226 MIGRASIGYPWVFNEIKHYFETGNKLPGPDLEERIKVTKKHLDFSVQ-WKGEKQGILEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFRGMPNFKP 299
>gi|113968744|ref|YP_732537.1| nifR3 family TIM-barrel protein [Shewanella sp. MR-4]
gi|114049112|ref|YP_739662.1| nifR3 family TIM-barrel protein [Shewanella sp. MR-7]
gi|117918856|ref|YP_868048.1| nifR3 family TIM-barrel protein [Shewanella sp. ANA-3]
gi|113883428|gb|ABI37480.1| putative TIM-barrel protein, nifR3 family [Shewanella sp. MR-4]
gi|113890554|gb|ABI44605.1| putative TIM-barrel protein, nifR3 family [Shewanella sp. MR-7]
gi|117611188|gb|ABK46642.1| putative TIM-barrel protein, nifR3 family [Shewanella sp. ANA-3]
Length = 322
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PWIF+EI+ KL I AE+ ++ E++ + +G + +G+ R
Sbjct: 222 MIGRGAQGRPWIFREIQHYLDTGNKLAPIEVAEQRQVMLEHLTKLYDLYG-EYKGIRFAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHI 283
>gi|110636783|ref|YP_676990.1| NifR3 family TIM-barrel protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279464|gb|ABG57650.1| tRNA-U20-dihydrouridine synthase [Cytophaga hutchinsonii ATCC
33406]
Length = 329
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF+E+K +KL + ER ++ K+++ + +E W G+ R
Sbjct: 226 MIGRAAIGYPWIFKEVKHFFATGEKLGPPTIRERVEVCKKHLAFSVE-WKGPKEGIFEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
+ + + P
Sbjct: 285 MHYTNYFRGIQNFKP 299
>gi|218258330|ref|ZP_03474732.1| hypothetical protein PRABACTJOHN_00387 [Parabacteroides johnsonii
DSM 18315]
gi|218225570|gb|EEC98220.1| hypothetical protein PRABACTJOHN_00387 [Parabacteroides johnsonii
DSM 18315]
Length = 343
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-KKLFDISSAERF----DILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG++ +PWIF+E+K ++ AE F DILK+ V + + RG+ R
Sbjct: 225 MIGRGSIGRPWIFREVKHFLNTGELLPAESFSWYLDILKKQVEQSVARL-DERRGILHIR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|94967061|ref|YP_589109.1| dihydrouridine synthase TIM-barrel protein nifR3 [Candidatus
Koribacter versatilis Ellin345]
gi|94549111|gb|ABF39035.1| Dihydrouridine synthase TIM-barrel protein nifR3 [Candidatus
Koribacter versatilis Ellin345]
Length = 370
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 1 MIGRGALIKPWIFQEIKEKKL---FDISSAE-RFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGR A PWIF++I++ +D+ + E R+++++ Y +E+ DT+G E +
Sbjct: 246 MIGRSAASNPWIFRQIEQYTATGRYDLPTNEDRYEMIRMYFRMLIEN---DTQGAEGKMK 302
Query: 57 FLLEWLSFLHRYIPVGLL 74
W F H G+L
Sbjct: 303 QFASW--FTHGVPGGGVL 318
>gi|423342662|ref|ZP_17320376.1| hypothetical protein HMPREF1077_01806 [Parabacteroides johnsonii
CL02T12C29]
gi|409216917|gb|EKN09896.1| hypothetical protein HMPREF1077_01806 [Parabacteroides johnsonii
CL02T12C29]
Length = 343
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-KKLFDISSAERF----DILKEYVNYGLEHWGSDTRGVETTR 55
MIGRG++ +PWIF+E+K ++ AE F DILK+ V + + RG+ R
Sbjct: 225 MIGRGSIGRPWIFREVKHFLNTGELLPAESFSWYLDILKKQVEQSVARL-DERRGILHIR 283
Query: 56 RFL 58
R L
Sbjct: 284 RHL 286
>gi|114561641|ref|YP_749154.1| putative TIM-barrel protein, nifR3 family protein [Shewanella
frigidimarina NCIMB 400]
gi|114332934|gb|ABI70316.1| putative TIM-barrel protein, nifR3 family protein [Shewanella
frigidimarina NCIMB 400]
Length = 320
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEI-----KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PWIF+EI KKL I + E+ ++ E++ + +G + +GV R
Sbjct: 222 MIGRGAQGRPWIFKEILHYLETGKKLAPIKAEEQRSVMLEHLKKLYDLYG-EYKGVRFAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHV 283
>gi|120597327|ref|YP_961901.1| nifR3 family TIM-barrel protein [Shewanella sp. W3-18-1]
gi|146294528|ref|YP_001184952.1| nifR3 family TIM-barrel protein [Shewanella putrefaciens CN-32]
gi|386315268|ref|YP_006011433.1| nifR3 family TIM-barrel protein [Shewanella putrefaciens 200]
gi|120557420|gb|ABM23347.1| putative TIM-barrel protein, nifR3 family [Shewanella sp. W3-18-1]
gi|145566218|gb|ABP77153.1| putative TIM-barrel protein, nifR3 family [Shewanella putrefaciens
CN-32]
gi|319427893|gb|ADV55967.1| TIM-barrel protein, nifR3 family [Shewanella putrefaciens 200]
Length = 322
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PWIF+EI+ KL I A++ +++ E++ + +G + +G+ R
Sbjct: 222 MIGRGAQGRPWIFREIQHYLETGNKLAPIEVAQQREVMLEHLTKLYDLYG-EYKGIRFAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHM 283
>gi|374598969|ref|ZP_09671971.1| tRNA-U20-dihydrouridine synthase [Myroides odoratus DSM 2801]
gi|423322839|ref|ZP_17300681.1| hypothetical protein HMPREF9716_00038 [Myroides odoratimimus CIP
103059]
gi|373910439|gb|EHQ42288.1| tRNA-U20-dihydrouridine synthase [Myroides odoratus DSM 2801]
gi|404610066|gb|EKB09422.1| hypothetical protein HMPREF9716_00038 [Myroides odoratimimus CIP
103059]
Length = 330
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR A+ PWIF EIK + L + +R + K ++ + +E W + G+ R
Sbjct: 226 MIGRAAIGYPWIFDEIKHYFQTGELLAPPTMKDRLEAAKNHLIWSME-WKGERLGIVEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + +H + P
Sbjct: 285 RHYTNYFKGIHSFKP 299
>gi|384171411|ref|YP_005552788.1| tRNA-dihydrouridine synthase [Arcobacter sp. L]
gi|345471021|dbj|BAK72471.1| tRNA-dihydrouridine synthase [Arcobacter sp. L]
Length = 299
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWG 45
MIGRGA+ KPW+F ++K + DIS+ ++ +I+ E+ + L+ G
Sbjct: 211 MIGRGAIGKPWVFYQLKH-GIEDISNEKKKEIILEHYDAMLKFHG 254
>gi|152990938|ref|YP_001356660.1| tRNA-dihydrouridine synthase [Nitratiruptor sp. SB155-2]
gi|151422799|dbj|BAF70303.1| tRNA-dihydrouridine synthase [Nitratiruptor sp. SB155-2]
Length = 308
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGS 46
MIGRGA+ KPWIF ++K K D+ ++ + +I+ E+ + + +G+
Sbjct: 220 MIGRGAIGKPWIFYQLKHGKE-DVDASLKKEIILEHFHQMIRFYGT 264
>gi|386283847|ref|ZP_10061071.1| tRNA-dihydrouridine synthase B [Sulfurovum sp. AR]
gi|385345390|gb|EIF52102.1| tRNA-dihydrouridine synthase B [Sulfurovum sp. AR]
Length = 317
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 1 MIGRGALIKPWIFQEIKE------KKLFDISSAERFD-ILKEYVNYG 40
MIGR A+ KPWIF++IKE +L E FD ++K Y YG
Sbjct: 220 MIGRAAVGKPWIFKQIKEGMEEPTSELIKEVVLEHFDQMIKHYDKYG 266
>gi|418689292|ref|ZP_13250414.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
FPW2026]
gi|418724521|ref|ZP_13283330.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str. UI
12621]
gi|400361437|gb|EJP17403.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
FPW2026]
gi|409961842|gb|EKO25584.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str. UI
12621]
Length = 329
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF +K+++L S +E D++ +++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSGVKKEEL---SWSEVLDVILQHLRWMIEDYGEEF-GLVLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|366163380|ref|ZP_09463135.1| nifR3 family TIM-barrel protein [Acetivibrio cellulolyticus CD2]
Length = 325
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
M+GRGA PWIF+ I E KL DI ++ D++K ++ ++ G ++ G++ R
Sbjct: 222 MVGRGAQGNPWIFKNILEYLKFNPKLSDIYDEDKIDMIKRHMEMLVKLKG-ESSGIKEMR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHI 283
>gi|417785384|ref|ZP_12433089.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
C10069]
gi|409952173|gb|EKO06687.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
C10069]
Length = 329
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF +K+++L S +E D++ +++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSGVKKEEL---SWSEVLDVILQHLRWMIEDYGEEF-GLVLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|456823687|gb|EMF72124.1| TIM-barrel protein, nifR3 family [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 329
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF +K+++L S +E D++ +++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSGVKKEEL---SWSEVLDVILQHLRWMIEDYGEEF-GLVLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|417761362|ref|ZP_12409374.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
2002000624]
gi|417776533|ref|ZP_12424369.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
2002000621]
gi|418670062|ref|ZP_13231436.1| TIM-barrel protein, nifR3 family [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418672465|ref|ZP_13233804.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
2002000623]
gi|421123143|ref|ZP_15583425.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str. Brem
329]
gi|409942776|gb|EKN88381.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
2002000624]
gi|410343887|gb|EKO95082.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str. Brem
329]
gi|410573675|gb|EKQ36721.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
2002000621]
gi|410580593|gb|EKQ48415.1| TIM-barrel protein, nifR3 family [Leptospira interrogans str.
2002000623]
gi|410754352|gb|EKR16007.1| TIM-barrel protein, nifR3 family [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 329
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF +K+++L S +E D++ +++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSGVKKEEL---SWSEVLDVILQHLRWMIEDYGEEF-GLVLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|390942870|ref|YP_006406631.1| tRNA-U20-dihydrouridine synthase [Belliella baltica DSM 15883]
gi|390416298|gb|AFL83876.1| tRNA-U20-dihydrouridine synthase [Belliella baltica DSM 15883]
Length = 330
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGR ++ PWIF EIK + L + ER ++ K+++++ ++ W + +G+ R
Sbjct: 226 MIGRASIGYPWIFNEIKHFLATGEMLEAPALEERINVTKKHLDFSVQ-WKGEKQGILEMR 284
Query: 56 RFLLEWLSFLHRYIP 70
R + + + P
Sbjct: 285 RHYTNYFRGMPNFKP 299
>gi|24212707|ref|NP_710188.1| tRNA-dihydrouridine synthase [Leptospira interrogans serovar Lai
str. 56601]
gi|386072495|ref|YP_005986812.1| tRNA-dihydrouridine synthase [Leptospira interrogans serovar Lai
str. IPAV]
gi|24193338|gb|AAN47206.1| tRNA-dihydrouridine synthase [Leptospira interrogans serovar Lai
str. 56601]
gi|353456284|gb|AER00829.1| tRNA-dihydrouridine synthase [Leptospira interrogans serovar Lai
str. IPAV]
Length = 329
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
+IGR A+ PWIF +K+++L S +E D++ +++ + +E +G + G+ R+ L++
Sbjct: 223 LIGRNAIGNPWIFSGVKKEEL---SWSEVLDVILQHLRWMIEDYGEEF-GLVLFRKHLVK 278
Query: 61 WLSFLH 66
+L+ L
Sbjct: 279 YLNGLE 284
>gi|373955125|ref|ZP_09615085.1| TIM-barrel protein, nifR3 family [Mucilaginibacter paludis DSM
18603]
gi|373891725|gb|EHQ27622.1| TIM-barrel protein, nifR3 family [Mucilaginibacter paludis DSM
18603]
Length = 330
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISS-------AERFDILKEYVNYGLEHWGSDTRGVET 53
MIGR A+ PWIF+EIK F+ AER D+ K ++ +E W G+
Sbjct: 227 MIGRAAIGYPWIFREIKH--FFETGEHRDKPTIAERVDVCKTHLEKSIE-WKGRRTGIFE 283
Query: 54 TRRFLLEWLSFLHRY 68
RR + L +
Sbjct: 284 MRRHYSNYFKGLDHF 298
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,199,452,672
Number of Sequences: 23463169
Number of extensions: 83257909
Number of successful extensions: 170393
Number of sequences better than 100.0: 619
Number of HSP's better than 100.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 169554
Number of HSP's gapped (non-prelim): 624
length of query: 132
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 35
effective length of database: 10,083,267,974
effective search space: 352914379090
effective search space used: 352914379090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)