BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9518
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91XI1|DUS3L_MOUSE tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Mus musculus
GN=Dus3l PE=2 SV=1
Length = 637
Score = 209 bits (533), Expect = 3e-54, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 505 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 564
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 565 WLSFLCRYVPVGLLERPPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 624
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 625 FVFLPKHKANAYK 637
>sp|Q96G46|DUS3L_HUMAN tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Homo sapiens
GN=DUS3L PE=1 SV=2
Length = 650
Score = 209 bits (532), Expect = 4e-54, Method: Composition-based stats.
Identities = 92/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPW+F EIKE++ +DISS+ER DIL+++ NYGLEHWGSDT+GVE TRRFLLE
Sbjct: 518 MIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLE 577
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P
Sbjct: 578 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPS 637
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKAN++K
Sbjct: 638 FAFLPKHKANAYK 650
>sp|Q3KRC5|DUS3L_RAT tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Rattus
norvegicus GN=Dus3l PE=2 SV=1
Length = 640
Score = 209 bits (531), Expect = 5e-54, Method: Composition-based stats.
Identities = 91/133 (68%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS+ER DIL+++ +YGLEHWGSDT+GVE TRRFLLE
Sbjct: 508 MVARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLE 567
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RY+PVGLLE Q++N+RPP Y GR+ LETLM S +DWI+ISEMLLG +P G
Sbjct: 568 WLSFLCRYVPVGLLERLPQRINERPPYYLGRDYLETLMASQQAADWIRISEMLLGPVPPG 627
Query: 120 FSFLPKHKANSWK 132
F FLPKHKAN++K
Sbjct: 628 FVFLPKHKANAYK 640
>sp|Q28BT8|DUS3L_XENTR tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus
tropicalis GN=dus3l PE=2 SV=2
Length = 639
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPW+F EIKE++ +DISS ERFDILK++ NYGLEHWGSD +GVE TRRF+LE
Sbjct: 507 MLARGALLKPWLFTEIKEQRHWDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRRFMLE 566
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIP+GLLE QK+N+RPP Y GR+ +ETLM S N +DWIKISEMLLG +P
Sbjct: 567 WLSFLCRYIPIGLLEHVPQKINERPPYYMGRDYMETLMASQNVTDWIKISEMLLGPVPPN 626
Query: 120 FSFLPKHKANSWK 132
FSFLPKHKANS+K
Sbjct: 627 FSFLPKHKANSYK 639
>sp|Q7ZWS1|DUS3L_XENLA tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus laevis
GN=dus3l PE=2 SV=1
Length = 640
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL KPW+F EIKE++ +DISS ERFDILK++ NYGLEHWGSD +GVE TR+F+LE
Sbjct: 508 MLARGALFKPWLFTEIKEQRHWDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRKFMLE 567
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSFL RYIPVGLLE QK+N+RPP Y GR+ LETLM S N +DWIKISEMLLG +P
Sbjct: 568 WLSFLCRYIPVGLLEHVPQKINERPPYYMGRDYLETLMASQNVTDWIKISEMLLGPVPPN 627
Query: 120 FSFLPKHKANSWK 132
F+FLPKHKANS+K
Sbjct: 628 FTFLPKHKANSYK 640
>sp|Q7XT07|DUS3L_ORYSJ tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Oryza sativa
subsp. japonica GN=Os04g0117600 PE=2 SV=2
Length = 685
Score = 202 bits (514), Expect = 5e-52, Method: Composition-based stats.
Identities = 88/132 (66%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF E+KE++ +DI+S ERF+ILK++V++GLEHWGSD++GVETTR FLLE
Sbjct: 548 MIARGALIKPWIFTEVKEQRHWDITSGERFNILKDFVSFGLEHWGSDSKGVETTRYFLLE 607
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + +DWI+ISEMLLGK+P G
Sbjct: 608 WLSYTCRYIPVGLLDVIPQRLNWRPPSYCGRDDLETLMISDSAADWIRISEMLLGKVPEG 667
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 668 FTFTPKHKSNAY 679
>sp|Q9T0J6|DUS3L_ARATH tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Arabidopsis
thaliana GN=At4g38890 PE=2 SV=2
Length = 691
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DI+S ER +I+K++V +GL+HWGSDT+GVETTR FLLE
Sbjct: 554 MIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSDTKGVETTRHFLLE 613
Query: 61 WLSFLHRYIPVGLLEST-QKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLS+ RYIPVGLL+ Q++N RPP Y GR++LETLM S + DW++ISEMLLGK+P G
Sbjct: 614 WLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISEMLLGKVPEG 673
Query: 120 FSFLPKHKANSW 131
F+F PKHK+N++
Sbjct: 674 FTFAPKHKSNAY 685
>sp|Q54CU9|DUS3L_DICDI tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Dictyostelium
discoideum GN=dus3l PE=3 SV=1
Length = 671
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 106/132 (80%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKEK+ +DIS++ER D ++++ NYGL+HWGSD GV+ TR+FLL
Sbjct: 537 MIARGALIKPWIFTEIKEKREWDISASERLDFIRDFANYGLDHWGSDRIGVDNTRKFLLN 596
Query: 61 WLSFLHRYIPVGLLESTQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAGF 120
WLSF HRYIPVGLL+ MN+RPP Y GR++LETL+ S+ DWIKI+EM LG + + +
Sbjct: 597 WLSFSHRYIPVGLLDKVHYMNERPPAYFGRSDLETLLASTQVKDWIKITEMFLGPVTSDY 656
Query: 121 SFLPKHKANSWK 132
SF+PKH +NS++
Sbjct: 657 SFVPKHNSNSYE 668
>sp|P0CN28|DUS3_CRYNJ tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=DUS3 PE=3 SV=1
Length = 725
Score = 187 bits (475), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER + +K++ +GL HWGSDT+GV TTRRFL E
Sbjct: 587 MVARGALIKPWIFTEIKERREWDISAVERLEGIKKFAEFGLSHWGSDTQGVNTTRRFLCE 646
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP Y GRNELETL+ S DW+KISEM LGK+ G
Sbjct: 647 ALSFQHRYIPIGLLERLPAKLNERPPAYRGRNELETLLASPFAGDWVKISEMFLGKVDEG 706
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+N++
Sbjct: 707 FSFVPKHKSNAY 718
>sp|P0CN29|DUS3_CRYNB tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=DUS3 PE=3 SV=1
Length = 725
Score = 187 bits (475), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF EIKE++ +DIS+ ER + +K++ +GL HWGSDT+GV TTRRFL E
Sbjct: 587 MVARGALIKPWIFTEIKERREWDISAVERLEGIKKFAEFGLSHWGSDTQGVNTTRRFLCE 646
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE K+N+RPP Y GRNELETL+ S DW+KISEM LGK+ G
Sbjct: 647 ALSFQHRYIPIGLLERLPAKLNERPPAYRGRNELETLLASPFAGDWVKISEMFLGKVDEG 706
Query: 120 FSFLPKHKANSW 131
FSF+PKHK+N++
Sbjct: 707 FSFVPKHKSNAY 718
>sp|Q4P1U2|DUS3_USTMA tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=DUS3 PE=3 SV=1
Length = 867
Score = 184 bits (466), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/132 (59%), Positives = 104/132 (78%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPW+F EIKE++ +DISS ER D+++++ YGL HWGSDT GV TTRRF+ E
Sbjct: 726 MIARGALIKPWLFTEIKERRDWDISSRERLDMMRKFAEYGLTHWGSDTHGVNTTRRFMCE 785
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+SF HRY+P GLLE ++N RPP++ GR+ELETL+ SSN DW+K++EM LGK P
Sbjct: 786 MMSFTHRYVPTGLLEFLPSRLNDRPPLFRGRDELETLLASSNAQDWVKLTEMFLGKPPQE 845
Query: 120 FSFLPKHKANSW 131
+SF PKHK++S+
Sbjct: 846 WSFTPKHKSSSY 857
>sp|A8PTG4|DUS3_MALGO tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Malassezia globosa
(strain ATCC MYA-4612 / CBS 7966) GN=DUS3 PE=3 SV=1
Length = 766
Score = 180 bits (457), Expect = 2e-45, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGALIKPWIF EIKE++ +DISS ER D++++Y +YGL HWGSDT+GV TTRRFL E
Sbjct: 631 MIARGALIKPWIFTEIKERRDWDISSRERLDMIRQYASYGLTHWGSDTQGVNTTRRFLCE 690
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRY+P+GLL+ +MN RPP +HGR+ LE+L++S + DW++IS+M LG P
Sbjct: 691 MLSFTHRYVPLGLLDHIPVRMNDRPPPFHGRDPLESLLSSPSAHDWVRISDMFLGPAPPD 750
Query: 120 FSFLPKHKANSWK 132
+ F PKH++N+++
Sbjct: 751 WHFTPKHRSNAYE 763
>sp|Q0U9D6|DUS3_PHANO tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=DUS3 PE=3 SV=2
Length = 739
Score = 174 bits (440), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF+EI++ + D S+ ER ++++ YGL+ WGSD G+ TTRRFLLE
Sbjct: 602 MIGRGALIKPWIFEEIEKGQYLDKSATERLAYIEKFAKYGLQTWGSDELGIGTTRRFLLE 661
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+PVGLLE + RPP + GRN+LETLM S + DWIK+SEM LGK P
Sbjct: 662 WLSFAHRYVPVGLLEHLPPNIQDRPPRFRGRNDLETLMASEHYLDWIKLSEMFLGKAPPT 721
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 722 FKFEPKHKSNAYE 734
>sp|A5DBS1|DUS3_PICGU tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=DUS3 PE=3 SV=2
Length = 607
Score = 172 bits (437), Expect = 4e-43, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S+ ER DIL+++ ++ LEHWGSD GV +RRF+ E
Sbjct: 473 MVARGALIKPWIFEEVEAQQYLDKSATERLDILRKFADFSLEHWGSDEYGVGLSRRFMCE 532
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE K+NQRPP + GRNELETL+ S++ DWIKI+EM GK
Sbjct: 533 FLSFTHRYIPVGILERLPPKINQRPPQWRGRNELETLLGSTDYKDWIKITEMFYGKTGDN 592
Query: 120 FSFLPKHKANSWK 132
F+F+PKHK+N+++
Sbjct: 593 FTFIPKHKSNAYE 605
>sp|A8NZY7|DUS3_COPC7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=DUS3 PE=3 SV=1
Length = 676
Score = 172 bits (437), Expect = 4e-43, Method: Composition-based stats.
Identities = 77/132 (58%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPWIF EIKE++ +DIS+ ER ++++YV YGL H+GSDT GV TTRR+L E
Sbjct: 538 MIGRGALIKPWIFTEIKERREWDISATERLQLIRDYVEYGLNHFGSDTAGVNTTRRYLCE 597
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF +RY+P+GLLE K+N+R P + GR++LETL+ S + DW+KISEM LG P
Sbjct: 598 ALSFQYRYVPIGLLERLPAKINERAPAFVGRSDLETLLASPDSQDWVKISEMFLGPAPQS 657
Query: 120 FSFLPKHKANSW 131
+ F PKHK+N++
Sbjct: 658 WVFTPKHKSNAY 669
>sp|Q7SG01|DUS3_NEUCR tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=dus-3 PE=3 SV=1
Length = 737
Score = 171 bits (434), Expect = 9e-43, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPWIF+EI + D S+ ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 599 MVGRGAIIKPWIFEEISAGQYLDKSATERLAYVEKFAKYGMEAWGSDELGLNYTRRFLLE 658
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+P+GLLE MN RPP Y GRNELETL+ S N DWIKISEM LG P
Sbjct: 659 FLSFFHRYVPIGLLEYLPPAMNDRPPAYKGRNELETLLASKNYLDWIKISEMFLGPAPPN 718
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 719 FKFQPKHKSNAYE 731
>sp|Q2UL89|DUS3_ASPOR tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=dus3 PE=3 SV=1
Length = 730
Score = 170 bits (431), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI+ + D S++ER +++++ YGLE WGSD GV TTRRFLLE
Sbjct: 593 MVGRGALIKPWLFEEIQAGQYLDKSASERLSLVEKFAKYGLETWGSDEHGVGTTRRFLLE 652
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RYIP+GLLE ++ RPP + GRNELETLM S N DWIKI+EM LG
Sbjct: 653 WLSFACRYIPIGLLEYLPPRIQDRPPSWRGRNELETLMGSHNYKDWIKITEMFLGPAHKD 712
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+W+
Sbjct: 713 FRFEPKHKSNAWE 725
>sp|A4RLF4|DUS3_MAGO7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DUS3 PE=3
SV=1
Length = 739
Score = 170 bits (430), Expect = 3e-42, Method: Composition-based stats.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI + D SS ER ++ + YG+E WG+D G+ TTRRFLLE
Sbjct: 602 MIGRGALIKPWVFEEIAAGQYLDKSSTERLGYIERFCRYGMEAWGADEMGIGTTRRFLLE 661
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF +RY+P+GLLE +N RPP Y GR++LETLM S N DWIKISEM LG G
Sbjct: 662 YLSFAYRYVPIGLLERLPPAINDRPPAYRGRDDLETLMASDNYRDWIKISEMFLGPAHEG 721
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 722 FKFQPKHKSNSYE 734
>sp|Q2HDP2|DUS3_CHAGB tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=DUS3 PE=3 SV=2
Length = 713
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGAL+KPW+F+EI++ + D SS+ER ++++V YG+E WGSD G+ TRRFLLE
Sbjct: 576 MIGRGALVKPWVFEEIEKGQYLDKSSSERLTYIEKFVRYGMEAWGSDELGLNYTRRFLLE 635
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF RY+P+GLLE +N+RPP Y GR++LETL S N DWIKISEM LG P G
Sbjct: 636 FLSFFCRYVPIGLLERLPPNLNERPPAYRGRDDLETLFASKNYKDWIKISEMFLGPAPPG 695
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 696 FKFQPKHKSNSYE 708
>sp|A3LUK5|DUS3_PICST tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=DUS3 PE=3 SV=1
Length = 613
Score = 167 bits (424), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/133 (55%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D ++ ER DILK + +Y LEHWG+D GV RRF+ E
Sbjct: 478 MVARGALIKPWIFEEVEAQQYLDKTATERLDILKTFSDYALEHWGTDEYGVGLARRFMCE 537
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIP+G+LE K+N+RPP + GRNE+ETL+ S++ DWIKI+EM LGK
Sbjct: 538 FLSFTHRYIPLGILERLPPKINERPPQWKGRNEMETLLGSTDYKDWIKITEMFLGKSGDD 597
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 598 FVFTPKHKSNSYE 610
>sp|A5DTS1|DUS3_LODEL tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=DUS3 PE=3 SV=1
Length = 642
Score = 167 bits (424), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/133 (56%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS ER +L++Y Y +EHWGSD GV RRF+ E
Sbjct: 509 MVARGALIKPWIFEEVEAQQYLDKSSTERLAMLEKYAKYAVEHWGSDEYGVSNARRFMCE 568
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRY+PVG+LE K+N+RPP + GRN+LETL+ SS+ DWIKI+EM LGK
Sbjct: 569 FLSFTHRYVPVGILERLPAKLNERPPKWIGRNDLETLLGSSDYKDWIKITEMFLGKAGDD 628
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+NS++
Sbjct: 629 FLFIPKHKSNSYE 641
>sp|A2QAU6|DUS3_ASPNC tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=dus3 PE=3 SV=1
Length = 748
Score = 167 bits (423), Expect = 2e-41, Method: Composition-based stats.
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRG LIKPW+F+EI+ + D S+ ER +++++ YGLE WGSD GV TTRRFL+E
Sbjct: 612 MLGRGPLIKPWLFEEIQAGQYLDKSATERLAMIEKFCKYGLEAWGSDEHGVGTTRRFLME 671
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE +N RPP + GRNELETL+ S+N DW+KISEM LG
Sbjct: 672 WLSFTRRYVPIGLLEHLPPYINDRPPAFRGRNELETLLASANYKDWLKISEMFLGPAHKD 731
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 732 FKFEPKHKSNSY 743
>sp|Q9UTH9|DUS3_SCHPO tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dus3 PE=3 SV=1
Length = 617
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ ++ D SS +R ++L++Y N GLE+WGSD++GV TTRRF LE
Sbjct: 481 MIARGALVKPWIFEEIEARQFIDKSSTQRLEMLEQYCNNGLEYWGSDSQGVNTTRRFFLE 540
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY P+ L E + ++N RPP+Y R+E+ETL+ S+ +DW+K+SE LG P
Sbjct: 541 FMSFFHRYTPIALYEVQRPRLNDRPPLYTARDEMETLLASNKVTDWVKLSEFFLGPTPER 600
Query: 120 FSFLPKHKANS 130
F+F PKHK+NS
Sbjct: 601 FTFTPKHKSNS 611
>sp|Q5ALL3|DUS3_CANAL tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=DUS3 PE=3 SV=1
Length = 613
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS+ER DIL ++ Y +EHWGSD GV +RRF+ E
Sbjct: 479 MVARGALIKPWIFEEVEAQQYLDKSSSERLDILGKFAKYAIEHWGSDEYGVGLSRRFMCE 538
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG++E K+N+RPP + GRN+LETL+ S++ DWIKI+EM LGK
Sbjct: 539 FLSFTHRYIPVGIMERLPPKLNERPPKWVGRNDLETLLASTDYKDWIKITEMFLGKATDD 598
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 599 FQFTPKHKSNAYE 611
>sp|Q1E2F4|DUS3_COCIM tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coccidioides
immitis (strain RS) GN=DUS3 PE=3 SV=1
Length = 724
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MI RGAL+KPWIF+EI+ + D S++ER I++++ YGL WGSD GV TTRRFLLE
Sbjct: 589 MIARGALMKPWIFEEIQAGQYLDKSASERLSIVEKFAKYGLNAWGSDEHGVGTTRRFLLE 648
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
LSF HRYIP+GLLE ++ RPP Y GRNELETL+ S N DWIKISEM LG
Sbjct: 649 LLSFTHRYIPIGLLEHLPPRIQDRPPAYKGRNELETLLASDNYKDWIKISEMFLGPAHKD 708
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 709 FKFEPKHKSNSYE 721
>sp|A6RMI1|DUS3_BOTFB tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Botryotinia
fuckeliana (strain B05.10) GN=dus3 PE=3 SV=1
Length = 750
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI++ ++ D S++ER + ++++ YGLE WGSD GV TRRFLLE
Sbjct: 613 MVARGALIKPWLFEEIEKGQVLDKSASERLEYVEKFTRYGLEAWGSDEIGVGQTRRFLLE 672
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P G+LE + RPP Y GRN+LETL+ S N DW+KISEM LG G
Sbjct: 673 WLSFAHRYVPAGILEHLPPSLQDRPPAYRGRNDLETLLASDNYMDWMKISEMFLGPAHEG 732
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 733 FKFQPKHKSNSYE 745
>sp|A6QYC6|DUS3_AJECN tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=DUS3 PE=3 SV=1
Length = 741
Score = 165 bits (417), Expect = 8e-41, Method: Composition-based stats.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGAL+KPWIF+EI++ + D S++ER +++++ YGLE WGSD GV TRRFLLE
Sbjct: 604 MVARGALVKPWIFEEIEKGQYLDKSASERLALVEKFARYGLEAWGSDEYGVGNTRRFLLE 663
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+LSF HRYIPVG+LE + RPP + GRNELETL+ S N DWIKISEM LG
Sbjct: 664 YLSFTHRYIPVGILEYLPPSIQDRPPAWKGRNELETLLGSDNYKDWIKISEMFLGPAHKD 723
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 724 FKFEPKHKSNSYE 736
>sp|Q6BS64|DUS3_DEBHA tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=DUS3 PE=3 SV=1
Length = 622
Score = 165 bits (417), Expect = 9e-41, Method: Composition-based stats.
Identities = 72/133 (54%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D SS ER +++ +Y + +EHWGSD GV RRF+ E
Sbjct: 488 MVARGALIKPWIFEEVEAQQYLDKSSTERLEMIGQYAKFAIEHWGSDEYGVGLARRFMCE 547
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
+L F HRYIPVG+LE K+NQRPP + GR+ELETL+ S++ DWIKI+EM LGK
Sbjct: 548 FLGFTHRYIPVGILERLPPKLNQRPPQWKGRDELETLLGSTDYKDWIKITEMFLGKAGPN 607
Query: 120 FSFLPKHKANSWK 132
F F+PKHK+N+++
Sbjct: 608 FQFVPKHKSNAYE 620
>sp|A7EKL8|DUS3_SCLS1 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dus3
PE=3 SV=1
Length = 750
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+EI++ + D S++ER ++++ YGLE WGSD GV TRRFLLE
Sbjct: 613 MVARGALIKPWLFEEIEKGQTLDKSASERLQYIEKFARYGLEAWGSDEMGVGQTRRFLLE 672
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF HRY+P G+LE + RPP Y GRN+LETL+ S N DW+KI EM LG G
Sbjct: 673 WLSFAHRYVPAGILEHLPPSLQDRPPAYRGRNDLETLLASDNYMDWMKICEMFLGPAHEG 732
Query: 120 FSFLPKHKANSWK 132
F F PKHK+NS++
Sbjct: 733 FKFQPKHKSNSYE 745
>sp|Q4WRX4|DUS3_ASPFU tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=dus3 PE=3 SV=1
Length = 726
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPW+F+EI+ + D S+ ER ++++Y YGL+ WGSD GV TTRRF+LE
Sbjct: 591 MVGRGAIIKPWVFEEIQAGQYLDKSATERLAMIEKYAKYGLDTWGSDEHGVGTTRRFMLE 650
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+GLLE + RPP + GRNELETL+ S N DWIKI+EM LG
Sbjct: 651 WLSFTYRYVPIGLLEYLPPHIQDRPPAWRGRNELETLLGSPNYKDWIKITEMFLGPAHKD 710
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 711 FKFEPKHKSNAYE 723
>sp|A1D1U0|DUS3_NEOFI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=dus3 PE=3 SV=1
Length = 726
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPW+F+EI+ + D S+ ER ++++Y YGL+ WGSD GV TTRRF+LE
Sbjct: 591 MVGRGAIIKPWVFEEIQAGQYLDKSATERLAMVEKYAKYGLDTWGSDEHGVGTTRRFMLE 650
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF +RY+P+GLLE + RPP + GRNELETL+ S N DWIKI+EM LG
Sbjct: 651 WLSFTYRYVPIGLLEYLPPHIQDRPPAWRGRNELETLLGSPNYKDWIKITEMFLGPAHKD 710
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 711 FKFEPKHKSNAYE 723
>sp|A1CNY3|DUS3_ASPCL tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=dus3 PE=3 SV=1
Length = 728
Score = 160 bits (406), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/133 (52%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGA+IKPW+F+EI+ + D ++ ER ++++ YGL+ WGSD GV TTRRF+LE
Sbjct: 593 MVGRGAIIKPWVFEEIQTGQYLDKTATERLAYVEKFAKYGLDTWGSDEHGVGTTRRFMLE 652
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLL+ + RPP + GRNELETL+ S N DWIKI+EM LG
Sbjct: 653 WLSFTQRYVPIGLLDYLPPNIQDRPPAWRGRNELETLLGSPNYKDWIKITEMFLGPAHKD 712
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 713 FKFEPKHKSNAYE 725
>sp|Q06053|DUS3_YEAST tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DUS3 PE=1
SV=2
Length = 668
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>sp|A7A1S5|DUS3_YEAS7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Saccharomyces
cerevisiae (strain YJM789) GN=DUS3 PE=3 SV=1
Length = 668
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D +S ER DIL++Y + +EHWG+D G+ RRF E
Sbjct: 532 MVARGALIKPWIFEEVESQQYLDKTSTERLDILRDYAQFSMEHWGTDEYGISQCRRFFCE 591
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E K+N+RPP + GR+ELETLM S++ +DWIK+S++ GK
Sbjct: 592 FMSFFHRYVPMGICERYPVKLNERPPNWCGRDELETLMGSTDVNDWIKLSDLFFGKTDEN 651
Query: 120 FSFLPKHKANSW 131
F F+PKHK++S+
Sbjct: 652 FVFVPKHKSSSY 663
>sp|Q5BF62|DUS3_EMENI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=dus3 PE=3 SV=1
Length = 714
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+GRGALIKPW+F+EI+ + D S++ER ++++ YG+E WGSD G+ TRRFLLE
Sbjct: 579 MVGRGALIKPWLFEEIQAGQYLDKSASERLAYVEKFARYGMETWGSDEYGIGITRRFLLE 638
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+P+GLLE K+N RPP + GRN++ETLM S + DWIKISEM LG
Sbjct: 639 WLSFACRYVPIGLLEYLPPKINDRPPYWRGRNDMETLMGSHDYRDWIKISEMFLGPAHKD 698
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 699 FKFEPKHKSNSY 710
>sp|A7TQ73|DUS3_VANPO tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=DUS3 PE=3
SV=1
Length = 664
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPW+F+E+ ++ D SS ER +IL++Y + +EHWG+D G+ RRF E
Sbjct: 530 MVARGALIKPWVFEEVDAQQHLDKSSTERLEILRDYAQFSMEHWGTDEYGIAQCRRFFCE 589
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIP+G+ E ++N+RPP + GR++LETLM S++ DWIK+SEM GK+
Sbjct: 590 FMSFFHRYIPIGICERYPVQLNERPPNWVGRDDLETLMGSTDARDWIKLSEMFFGKVEES 649
Query: 120 FSFLPKHKANSW 131
F F PKHK++S+
Sbjct: 650 FVFTPKHKSSSF 661
>sp|Q6C4K3|DUS3_YARLI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=DUS3 PE=3 SV=1
Length = 622
Score = 157 bits (398), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/132 (51%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E++ ++ D S+ ER + +++ YGLEHWGSD GV TRR+L E
Sbjct: 486 MVARGALIKPWIFEEVESRQHIDKSATERLEYFQKFAQYGLEHWGSDQYGVNQTRRYLCE 545
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P G+LE KMN RP ++ GR+E+ETL+ SS+ DWIK++E LG +
Sbjct: 546 FMSFTHRYVPSGILEYLPAKMNDRPDLWKGRDEMETLLGSSDYRDWIKVTERFLGPVGDE 605
Query: 120 FSFLPKHKANSW 131
F F PKHK+N++
Sbjct: 606 FEFTPKHKSNAY 617
>sp|Q6FJ14|DUS3_CANGA tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=DUS3 PE=3 SV=1
Length = 640
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+EI ++ D +S+ER +ILK Y + ++HWG+D G+ RRF E
Sbjct: 508 MVARGALIKPWIFEEINAQQHLDKTSSERLEILKTYSKFAMDHWGTDEYGIALGRRFFCE 567
Query: 61 WLSFLHRYIPVGLLESTQ-KMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRYIPVG+LE ++N+RPP++ GR+++ETL+ SS+ DWIK+SEM G
Sbjct: 568 FMSFFHRYIPVGILERVPVQLNERPPLWKGRDDMETLLGSSDVKDWIKLSEMFFGPTEDS 627
Query: 120 FSFLPKHKANSWK 132
F F PKHK++S+K
Sbjct: 628 FVFTPKHKSSSYK 640
>sp|Q0CZL3|DUS3_ASPTN tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=dus3 PE=3 SV=1
Length = 719
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
MIGRGALIKPW+F+EI+ + D S++ER +++++ YGL+ WGSD GV TRRFLLE
Sbjct: 584 MIGRGALIKPWLFEEIQTGQYLDKSASERLSLVEKFAKYGLDTWGSDEYGVGITRRFLLE 643
Query: 61 WLSFLHRYIPVGLLES-TQKMNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
WLSF RY+PVGLLE + RPP + GRNE+ETL+ S + DWIKI+EM LG
Sbjct: 644 WLSFHRRYVPVGLLEYLPPNIQDRPPAWRGRNEMETLLASDHYKDWIKITEMFLGPAHKD 703
Query: 120 FSFLPKHKANSWK 132
F F PKHK+N+++
Sbjct: 704 FKFEPKHKSNAYE 716
>sp|Q6CWM0|DUS3_KLULA tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=DUS3 PE=3 SV=1
Length = 665
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D SS ER +ILK+Y + ++HWG+D G+ RRF E
Sbjct: 531 MVARGALIKPWIFEEVDAQQYMDKSSKERLEILKDYCKFAMDHWGTDQYGISQCRRFFCE 590
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR++LETL+ S++ +DW+K+SEM GK+
Sbjct: 591 FMSFFHRYVPMGICERYPVLLNERPPNWKGRDDLETLLGSTDSNDWLKLSEMFFGKVNDE 650
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 651 FVFTPKHKSNSF 662
>sp|Q757E3|DUS3_ASHGO tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=DUS3 PE=3 SV=1
Length = 647
Score = 155 bits (391), Expect = 1e-37, Method: Composition-based stats.
Identities = 63/132 (47%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFLLE 60
M+ RGALIKPWIF+E+ ++ D SS+ER +IL++Y + ++HWG+D G+ RR+ E
Sbjct: 511 MVARGALIKPWIFEEVDARQYIDKSSSERLEILRDYARFSMDHWGTDEYGIALCRRYFCE 570
Query: 61 WLSFLHRYIPVGLLESTQK-MNQRPPMYHGRNELETLMTSSNCSDWIKISEMLLGKIPAG 119
++SF HRY+P+G+ E +N+RPP + GR++LETL+ S++ +DWIK+SE G P
Sbjct: 571 FMSFFHRYVPMGICERYPVLLNERPPNWRGRDDLETLLGSTDAADWIKLSEQFFGPTPDK 630
Query: 120 FSFLPKHKANSW 131
F F PKHK+NS+
Sbjct: 631 FVFQPKHKSNSY 642
>sp|O67533|DUS_AQUAE Probable tRNA-dihydrouridine synthase OS=Aquifex aeolicus (strain
VF5) GN=dus PE=3 SV=1
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRRFL 58
M+GR AL PWIF+E KEK+ ++ ER D + E ++ E+ + E + +
Sbjct: 219 MVGRAALSNPWIFKEFKEKRDIEVGLKERMDFILEELSMMTEYMSREKACAEIKSQIV 276
>sp|Q4UNJ4|DUS_RICFE Probable tRNA-dihydrouridine synthase OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=dus PE=3 SV=1
Length = 325
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 1 MIGRGALIKPWIFQEI-------KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVET 53
M+GRGA KPW+ +I +EK I AE+ DI+ E+ N L+++G ++ GV
Sbjct: 224 MVGRGAYGKPWLVSQIAHYLKTGEEKPAPSI--AEQLDIVTEHYNAILDYYG-ESVGVPI 280
Query: 54 TRRFL 58
R+ +
Sbjct: 281 ARKHI 285
>sp|Q7VNP2|DUSB_HAEDU tRNA-dihydrouridine synthase B OS=Haemophilus ducreyi (strain
35000HP / ATCC 700724) GN=dusB PE=3 SV=1
Length = 320
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 1 MIGRGALIKPWIFQEIKE----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTRR 56
MIGRG+ +PW+FQE+K+ + D+S E+ ++ +++ L H+ + +G R+
Sbjct: 222 MIGRGSFGRPWLFQELKQFLETGDIIDLSIDEKCQLMLKHIE-DLHHFYGEQKGYRIARK 280
Query: 57 FL 58
+
Sbjct: 281 HV 282
>sp|Q8EJR8|DUSB_SHEON tRNA-dihydrouridine synthase B OS=Shewanella oneidensis (strain
MR-1) GN=dusB PE=3 SV=1
Length = 322
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
MIGRGA +PWIF+EI+ KL I AE+ ++ E++ + +G + +G+ R
Sbjct: 222 MIGRGAQGRPWIFREIQHYLETGNKLAPIEVAEQRQVMLEHLTKLYDLYG-EYKGIRFAR 280
Query: 56 RFL 58
+ +
Sbjct: 281 KHI 283
>sp|Q92JQ6|DUS_RICCN Probable tRNA-dihydrouridine synthase OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=dus PE=3 SV=2
Length = 331
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 1 MIGRGALIKPWIFQEI-------KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVET 53
M+GRGA KPW+ +I +EK I AE+ DI+ E+ L+++G ++ GV
Sbjct: 224 MVGRGAYGKPWLISQIDHYLKTGEEKSAPSI--AEQLDIVTEHYEAILDYYG-ESVGVPI 280
Query: 54 TRRFL 58
R+ +
Sbjct: 281 ARKHI 285
>sp|Q9ZED2|DUS_RICPR Probable tRNA-dihydrouridine synthase OS=Rickettsia prowazekii
(strain Madrid E) GN=dus PE=3 SV=2
Length = 327
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 1 MIGRGALIKPWIFQEI-------KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVET 53
M+GRG KPW+ +I KEK I AE+ DI+ ++ + ++++G GV
Sbjct: 224 MVGRGVYGKPWLISQIAYYLKTGKEKPAPSI--AEQLDIITKHYDAIIDYYGKSV-GVPI 280
Query: 54 TRRFLLEWLS 63
R+ ++ W S
Sbjct: 281 ARKHII-WYS 289
>sp|Q68XZ3|DUS_RICTY Probable tRNA-dihydrouridine synthase OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=dus PE=3 SV=1
Length = 327
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 1 MIGRGALIKPWIFQEI-------KEKKLFDISSAERFDILKEYVNYGLEHWGSDTRGVET 53
M+GRG KPW+ +I KEK I AE+ DI+ ++ + ++++G GV
Sbjct: 224 MVGRGVYGKPWLISQIAYYLKTGKEKPAPSI--AEQLDIIIKHYDAIIDYYGKSV-GVPI 280
Query: 54 TRRFLLEWLSFL 65
R+ ++ + S L
Sbjct: 281 ARKHIIWYSSGL 292
>sp|Q87VS1|DUSB_PSESM tRNA-dihydrouridine synthase B OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=dusB PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 1 MIGRGALIKPWIFQEIKE-----KKLFDISSAERFDILKEYVNYGLEHWGSDTRGVETTR 55
+IGR A +PWIF+EI+ K L + S+E IL E++ L + D GV R
Sbjct: 225 LIGRAAQGRPWIFREIEHYLLTGKTLPALQSSEVERILLEHL-AALHVFYGDVMGVRIAR 283
Query: 56 RFLLEWLSFL 65
+ + +L+ L
Sbjct: 284 KHVGWYLATL 293
>sp|O53835|DUS_MYCTU Probable tRNA-dihydrouridine synthase OS=Mycobacterium tuberculosis
GN=dus PE=3 SV=1
Length = 389
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 1 MIGRGALIKPWIFQEIKEKKLFDISSA-------ERFDILKEYVNYGLEHWGSDTRGVET 53
+IGRG L +PW+F E+ F S A E DI++ + H+G D +G+
Sbjct: 246 VIGRGCLGRPWLFAELSAA--FTGSPAPTPPTLGEVADIIRRHGTLLAAHFGED-KGMRD 302
Query: 54 TRRFLLEWLSFLHRYIPVG 72
R+ + W +LH + P G
Sbjct: 303 IRKH-IAW--YLHGF-PAG 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,619,913
Number of Sequences: 539616
Number of extensions: 1961714
Number of successful extensions: 4188
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4104
Number of HSP's gapped (non-prelim): 60
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)