Query psy952
Match_columns 573
No_of_seqs 487 out of 3402
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 21:43:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v64_C Agrin; beta propeller, 100.0 9E-52 3.1E-56 425.5 38.7 297 1-305 26-340 (349)
2 3p5b_L Low density lipoprotein 100.0 2.7E-51 9.3E-56 429.4 40.7 301 2-305 66-395 (400)
3 3sov_A LRP-6, low-density lipo 100.0 5.5E-51 1.9E-55 413.5 36.3 288 14-305 2-306 (318)
4 3v65_B Low-density lipoprotein 100.0 1.5E-50 5E-55 422.2 39.0 296 2-305 70-383 (386)
5 3m0c_C LDL receptor, low-densi 100.0 4.2E-50 1.4E-54 449.8 40.5 302 1-305 377-707 (791)
6 3s94_A LRP-6, low-density lipo 100.0 5E-50 1.7E-54 440.8 40.0 292 5-305 308-615 (619)
7 4a0p_A LRP6, LRP-6, low-densit 100.0 2.9E-49 9.9E-54 435.1 40.5 293 5-305 300-617 (628)
8 1ijq_A LDL receptor, low-densi 100.0 8E-48 2.7E-52 390.9 39.6 288 16-305 1-313 (316)
9 4a0p_A LRP6, LRP-6, low-densit 100.0 4.1E-48 1.4E-52 426.0 40.2 285 14-305 4-303 (628)
10 3s94_A LRP-6, low-density lipo 100.0 1E-47 3.4E-52 422.6 33.6 287 15-305 8-311 (619)
11 1n7d_A LDL receptor, low-densi 100.0 3.9E-46 1.3E-50 416.1 20.7 302 1-305 359-689 (699)
12 1n7d_A LDL receptor, low-densi 100.0 1.1E-37 3.7E-42 348.0 19.9 231 307-573 4-262 (699)
13 1npe_A Nidogen, entactin; glyc 100.0 1E-33 3.6E-38 279.7 34.4 251 17-271 2-261 (267)
14 3m0c_C LDL receptor, low-densi 100.0 1.5E-36 5.3E-41 340.1 4.2 250 306-568 21-316 (791)
15 3v65_B Low-density lipoprotein 100.0 8.9E-28 3.1E-32 250.0 33.1 207 56-270 87-298 (386)
16 3v64_C Agrin; beta propeller, 100.0 4.7E-28 1.6E-32 248.7 29.3 208 15-229 83-296 (349)
17 3sov_A LRP-6, low-density lipo 100.0 8.4E-28 2.9E-32 243.2 29.2 208 16-230 46-260 (318)
18 3p5b_L Low density lipoprotein 100.0 2E-27 6.7E-32 248.5 31.0 211 15-230 122-342 (400)
19 1ijq_A LDL receptor, low-densi 100.0 1.8E-26 6.3E-31 233.6 30.1 210 16-230 41-260 (316)
20 3s25_A Hypothetical 7-bladed b 99.9 1.6E-25 5.5E-30 224.0 26.9 210 24-257 87-300 (302)
21 1npe_A Nidogen, entactin; glyc 99.9 4.5E-24 1.5E-28 210.4 26.6 206 57-269 2-217 (267)
22 3tc9_A Hypothetical hydrolase; 99.9 3.4E-20 1.2E-24 195.3 28.9 229 16-247 149-428 (430)
23 4hw6_A Hypothetical protein, I 99.9 4.2E-20 1.4E-24 194.7 27.5 228 16-247 152-431 (433)
24 3tc9_A Hypothetical hydrolase; 99.9 4.6E-20 1.6E-24 194.4 26.4 208 43-255 135-376 (430)
25 3hrp_A Uncharacterized protein 99.9 3.7E-19 1.2E-23 186.4 30.8 227 15-247 140-408 (409)
26 4hw6_A Hypothetical protein, I 99.8 2.5E-19 8.5E-24 188.8 24.6 207 43-255 137-379 (433)
27 3hrp_A Uncharacterized protein 99.8 1.6E-18 5.6E-23 181.4 29.6 207 43-254 129-359 (409)
28 3s25_A Hypothetical 7-bladed b 99.8 1.9E-18 6.4E-23 172.7 25.9 235 5-270 18-273 (302)
29 3kya_A Putative phosphatase; s 99.8 1.1E-17 3.7E-22 176.4 28.7 229 17-248 152-474 (496)
30 3kya_A Putative phosphatase; s 99.8 4E-18 1.4E-22 179.7 25.2 208 43-253 137-413 (496)
31 3fvz_A Peptidyl-glycine alpha- 99.8 1.4E-17 4.9E-22 169.0 28.0 226 41-268 20-299 (329)
32 1rwi_B Serine/threonine-protei 99.8 5.9E-18 2E-22 165.9 21.7 225 16-249 34-264 (270)
33 1rwi_B Serine/threonine-protei 99.8 1.7E-17 5.7E-22 162.6 24.5 214 46-269 25-242 (270)
34 3fvz_A Peptidyl-glycine alpha- 99.8 1E-16 3.5E-21 162.7 29.6 219 26-247 70-320 (329)
35 1q7f_A NHL, brain tumor CG1071 99.8 2.9E-16 1E-20 155.4 29.8 225 16-246 40-277 (286)
36 2qc5_A Streptogramin B lactona 99.8 5.6E-16 1.9E-20 153.6 30.5 246 15-269 29-280 (300)
37 2fp8_A Strictosidine synthase; 99.8 1.3E-16 4.5E-21 161.4 25.8 235 6-247 20-311 (322)
38 2fyj_A Low-density lipoprotein 99.7 1.3E-18 4.6E-23 136.6 6.4 76 408-491 3-80 (82)
39 1q7f_A NHL, brain tumor CG1071 99.7 4.5E-16 1.5E-20 154.1 26.3 220 43-268 28-258 (286)
40 3g4e_A Regucalcin; six bladed 99.7 3.9E-16 1.3E-20 156.0 25.7 219 41-269 9-249 (297)
41 2fcw_B LDL receptor, low-densi 99.7 2.7E-19 9.2E-24 139.5 2.0 78 451-563 2-79 (80)
42 2fyj_A Low-density lipoprotein 99.7 2.3E-18 7.7E-23 135.4 7.2 78 450-563 3-81 (82)
43 2z2n_A Virginiamycin B lyase; 99.7 2.6E-15 8.8E-20 148.8 30.7 249 8-268 18-274 (299)
44 2fp8_A Strictosidine synthase; 99.7 1.5E-16 5.3E-21 160.8 22.2 206 43-257 17-276 (322)
45 3dsm_A Uncharacterized protein 99.7 1E-15 3.5E-20 155.3 28.2 243 18-271 55-322 (328)
46 2fcw_B LDL receptor, low-densi 99.7 4E-19 1.4E-23 138.5 1.9 77 409-491 2-78 (80)
47 2qc5_A Streptogramin B lactona 99.7 3E-15 1E-19 148.4 27.0 222 16-247 72-298 (300)
48 3e5z_A Putative gluconolactona 99.7 2.8E-15 9.4E-20 149.3 24.4 221 32-268 15-263 (296)
49 2z2n_A Virginiamycin B lyase; 99.7 1.1E-14 3.9E-19 144.1 28.1 226 16-250 67-296 (299)
50 2ism_A Putative oxidoreductase 99.7 2.3E-15 8E-20 154.1 22.3 207 34-249 20-297 (352)
51 2p4o_A Hypothetical protein; p 99.7 4.4E-15 1.5E-19 149.1 23.5 213 45-269 32-263 (306)
52 3dr2_A Exported gluconolactona 99.7 1.7E-14 5.9E-19 144.5 25.4 212 33-257 33-274 (305)
53 2p4o_A Hypothetical protein; p 99.7 6.8E-14 2.3E-18 140.3 28.6 213 16-239 42-279 (306)
54 3a9g_A Putative uncharacterize 99.6 2.5E-14 8.7E-19 146.4 24.7 206 35-249 19-296 (354)
55 3vgz_A Uncharacterized protein 99.6 8.6E-13 2.9E-17 133.8 32.0 246 17-268 53-321 (353)
56 2ism_A Putative oxidoreductase 99.6 9.1E-14 3.1E-18 142.3 24.4 217 16-239 41-335 (352)
57 3dsm_A Uncharacterized protein 99.6 6.2E-13 2.1E-17 134.7 30.1 232 24-269 16-275 (328)
58 2dg1_A DRP35, lactonase; beta 99.6 3.7E-13 1.3E-17 136.0 26.6 212 38-256 38-269 (333)
59 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2E-13 6.8E-18 136.4 24.2 224 37-268 10-275 (314)
60 3a9g_A Putative uncharacterize 99.6 3.7E-13 1.3E-17 137.7 26.6 226 17-247 40-350 (354)
61 3g4e_A Regucalcin; six bladed 99.6 4.2E-13 1.4E-17 133.8 26.2 214 16-239 24-263 (297)
62 2qe8_A Uncharacterized protein 99.6 3.3E-13 1.1E-17 137.7 25.8 209 26-243 43-315 (343)
63 3qqz_A Putative uncharacterize 99.6 2.5E-12 8.5E-17 124.3 28.5 203 45-249 27-253 (255)
64 2g8s_A Glucose/sorbosone dehyd 99.6 1.4E-13 4.7E-18 141.0 20.0 212 33-250 6-309 (353)
65 3das_A Putative oxidoreductase 99.5 1.1E-12 3.7E-17 132.5 25.4 227 36-269 23-316 (347)
66 3dr2_A Exported gluconolactona 99.5 2.4E-12 8.2E-17 128.8 26.5 215 17-246 57-303 (305)
67 3e5z_A Putative gluconolactona 99.5 8.2E-12 2.8E-16 124.0 29.8 216 19-251 42-288 (296)
68 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5E-12 1.7E-16 126.2 28.3 218 23-248 44-298 (314)
69 2ghs_A AGR_C_1268P; regucalcin 99.5 4.1E-12 1.4E-16 128.5 27.8 214 43-268 47-278 (326)
70 2qe8_A Uncharacterized protein 99.5 7.3E-13 2.5E-17 135.0 21.7 218 45-269 17-299 (343)
71 3vgz_A Uncharacterized protein 99.5 1.2E-11 4E-16 125.3 30.2 210 44-257 40-270 (353)
72 3u4y_A Uncharacterized protein 99.5 2.1E-11 7.1E-16 122.6 29.1 228 17-252 10-255 (331)
73 2g8s_A Glucose/sorbosone dehyd 99.5 2.2E-12 7.4E-17 132.0 22.1 225 19-247 32-352 (353)
74 1l0q_A Surface layer protein; 99.5 6.1E-11 2.1E-15 122.1 32.9 243 17-267 2-250 (391)
75 2dg1_A DRP35, lactonase; beta 99.5 1.5E-11 5.1E-16 124.1 27.3 225 17-246 56-313 (333)
76 1l0q_A Surface layer protein; 99.5 6.7E-11 2.3E-15 121.8 32.3 244 8-258 35-284 (391)
77 3hfq_A Uncharacterized protein 99.4 4.4E-11 1.5E-15 121.3 27.1 227 25-254 63-324 (347)
78 3das_A Putative oxidoreductase 99.4 6.4E-11 2.2E-15 119.6 26.9 218 15-238 41-327 (347)
79 1ri6_A Putative isomerase YBHE 99.4 2.6E-10 8.9E-15 114.6 30.8 254 16-270 49-332 (343)
80 3u4y_A Uncharacterized protein 99.4 9.8E-11 3.3E-15 117.6 26.2 210 51-268 4-228 (331)
81 2p9w_A MAL S 1 allergenic prot 99.4 5.1E-11 1.7E-15 118.0 23.3 199 44-246 12-262 (334)
82 3c75_H MADH, methylamine dehyd 99.4 6.4E-11 2.2E-15 123.3 24.9 243 17-264 85-417 (426)
83 3hfq_A Uncharacterized protein 99.4 1.1E-10 3.6E-15 118.5 25.7 218 27-247 20-269 (347)
84 2ghs_A AGR_C_1268P; regucalcin 99.4 4.1E-10 1.4E-14 113.7 28.9 212 17-239 61-293 (326)
85 3sre_A PON1, serum paraoxonase 99.4 6.6E-11 2.3E-15 119.9 22.3 194 44-248 49-297 (355)
86 3scy_A Hypothetical bacterial 99.4 1.6E-09 5.5E-14 110.4 32.8 235 17-254 62-344 (361)
87 1ri6_A Putative isomerase YBHE 99.3 8.5E-10 2.9E-14 110.8 29.4 228 17-248 5-261 (343)
88 2iwa_A Glutamine cyclotransfer 99.3 6.2E-10 2.1E-14 108.1 26.8 195 45-248 21-236 (266)
89 2mad_H Methylamine dehydrogena 99.3 2.6E-09 9E-14 109.9 31.0 244 17-270 33-371 (373)
90 3bws_A Protein LP49; two-domai 99.3 3.1E-09 1.1E-13 110.9 31.1 245 16-267 133-407 (433)
91 1pby_B Quinohemoprotein amine 99.3 2.3E-09 7.8E-14 107.3 28.8 225 23-257 9-318 (337)
92 1nir_A Nitrite reductase; hemo 99.3 1.6E-09 5.5E-14 117.3 29.6 238 15-258 147-418 (543)
93 3qqz_A Putative uncharacterize 99.3 1.3E-09 4.6E-14 105.1 25.3 180 24-208 48-254 (255)
94 2iwa_A Glutamine cyclotransfer 99.3 9.4E-10 3.2E-14 106.8 23.6 182 17-207 32-237 (266)
95 2oiz_A Aromatic amine dehydrog 99.2 6.3E-09 2.2E-13 106.6 29.6 246 17-268 16-355 (361)
96 2wg3_C Hedgehog-interacting pr 99.2 4.4E-10 1.5E-14 118.4 20.9 206 36-247 5-310 (463)
97 1d2l_A Lipoprotein receptor re 99.2 8.1E-12 2.8E-16 85.1 4.5 40 522-562 3-42 (45)
98 1mda_H Methylamine dehydrogena 99.2 1.3E-09 4.5E-14 111.4 23.0 252 5-269 19-365 (368)
99 3sre_A PON1, serum paraoxonase 99.2 6.3E-09 2.2E-13 105.4 27.6 163 24-194 82-284 (355)
100 1cru_A Protein (soluble quinop 99.2 1.4E-09 4.6E-14 114.8 23.2 226 15-244 36-431 (454)
101 2xrc_A Human complement factor 99.2 9.9E-12 3.4E-16 134.6 6.3 103 415-564 175-277 (565)
102 3scy_A Hypothetical bacterial 99.2 7E-09 2.4E-13 105.7 26.6 181 46-227 156-359 (361)
103 1cr8_A Protein (LOW density li 99.2 1.6E-11 5.3E-16 82.8 4.3 40 523-564 2-41 (42)
104 1ajj_A LR5, low-density lipopr 99.2 8.7E-12 3E-16 81.6 2.9 36 525-563 2-37 (37)
105 1cru_A Protein (soluble quinop 99.2 3.6E-10 1.2E-14 119.2 17.0 159 34-198 16-249 (454)
106 2m0p_A Low-density lipoprotein 99.2 5.2E-12 1.8E-16 88.1 1.5 39 522-563 4-42 (52)
107 3dpr_E LDL-receptor class A 3; 99.2 1.8E-11 6.3E-16 81.0 3.8 37 525-564 1-39 (39)
108 2p9w_A MAL S 1 allergenic prot 99.2 4.5E-09 1.5E-13 104.1 22.6 218 16-238 24-304 (334)
109 3bws_A Protein LP49; two-domai 99.2 1.7E-08 6E-13 105.1 28.6 223 17-246 181-429 (433)
110 3a7q_B Low-density lipoprotein 99.1 1.7E-11 5.7E-16 83.5 3.4 39 522-563 5-43 (44)
111 2jm4_A Relaxin receptor 1; LDL 99.1 2.4E-11 8.2E-16 82.3 4.1 39 522-563 4-43 (43)
112 2kny_A LRP-1, linker, APO-E; l 99.1 1.4E-11 4.7E-16 95.5 3.2 54 519-573 4-59 (80)
113 1jmx_B Amine dehydrogenase; ox 99.1 2.8E-08 9.6E-13 99.9 28.2 228 17-256 11-332 (349)
114 1qks_A Cytochrome CD1 nitrite 99.1 2.8E-08 9.7E-13 107.7 29.4 230 16-249 166-421 (567)
115 3mbr_X Glutamine cyclotransfer 99.1 1.5E-08 5.2E-13 96.4 23.4 182 17-207 31-235 (243)
116 1jof_A Carboxy-CIS,CIS-muconat 99.1 2.4E-08 8.3E-13 102.1 26.7 233 18-253 4-296 (365)
117 2knx_A Prolow-density lipoprot 99.1 3.6E-11 1.2E-15 83.9 3.6 44 522-570 4-48 (50)
118 3nok_A Glutaminyl cyclase; bet 99.1 4.2E-08 1.4E-12 94.1 26.2 191 45-246 55-263 (268)
119 3mbr_X Glutamine cyclotransfer 99.1 1.6E-07 5.3E-12 89.4 29.8 197 40-246 16-232 (243)
120 3nol_A Glutamine cyclotransfer 99.1 9.7E-09 3.3E-13 98.5 21.6 179 17-205 53-254 (262)
121 1k7b_A Subgroup A ROUS sarcoma 99.1 3.1E-11 1.1E-15 83.6 2.4 38 523-563 5-47 (47)
122 2gtl_O Extracellular hemoglobi 99.1 4.2E-12 1.5E-16 116.4 -2.8 61 503-573 40-102 (215)
123 2hqs_A Protein TOLB; TOLB, PAL 99.1 8.2E-08 2.8E-12 100.2 28.9 226 25-258 159-395 (415)
124 2gtl_O Extracellular hemoglobi 99.1 2.3E-13 8E-18 124.8 -11.9 124 432-572 39-181 (215)
125 3nol_A Glutamine cyclotransfer 99.1 1.3E-07 4.6E-12 90.6 27.3 192 43-246 41-253 (262)
126 2i1p_A Low-density lipoprotein 99.1 4.2E-11 1.4E-15 83.2 1.9 40 523-564 5-44 (48)
127 1nir_A Nitrite reductase; hemo 99.0 2.2E-07 7.5E-12 100.5 32.0 246 17-267 238-533 (543)
128 1j8e_A Low-density lipoprotein 99.0 2.8E-11 9.5E-16 82.4 0.6 35 523-558 3-37 (44)
129 3nok_A Glutaminyl cyclase; bet 99.0 1.1E-08 3.7E-13 98.2 18.6 179 17-205 65-264 (268)
130 1jof_A Carboxy-CIS,CIS-muconat 99.0 4.4E-08 1.5E-12 100.2 23.2 185 24-210 118-344 (365)
131 1jrf_A TVA LDL-A module, subgr 99.0 5.9E-11 2E-15 82.3 0.8 39 523-564 3-46 (47)
132 2kny_A LRP-1, linker, APO-E; l 99.0 1.3E-10 4.4E-15 90.0 2.4 69 404-474 3-74 (80)
133 3sjl_D Methylamine dehydrogena 99.0 1.4E-07 4.7E-12 96.5 25.4 234 25-268 109-381 (386)
134 1d2l_A Lipoprotein receptor re 99.0 3.8E-10 1.3E-14 76.8 3.6 38 409-447 5-42 (45)
135 1qks_A Cytochrome CD1 nitrite 98.9 2.2E-07 7.6E-12 100.6 26.8 214 52-271 163-398 (567)
136 2ece_A 462AA long hypothetical 98.9 1.6E-07 5.3E-12 97.0 23.7 219 15-236 94-399 (462)
137 3c75_H MADH, methylamine dehyd 98.9 2.3E-08 7.7E-13 104.0 17.7 211 54-269 82-378 (426)
138 2gtl_N Extracellular hemoglobi 98.9 2.6E-10 8.9E-15 103.4 2.4 50 523-573 51-103 (220)
139 1pby_B Quinohemoprotein amine 98.9 1.4E-07 4.7E-12 94.1 22.6 177 58-240 2-196 (337)
140 1fwx_A Nitrous oxide reductase 98.9 8.4E-08 2.9E-12 102.3 21.7 250 17-271 102-454 (595)
141 3q6k_A 43.2 kDa salivary prote 98.9 4.9E-07 1.7E-11 91.8 26.3 192 43-238 85-343 (381)
142 3no2_A Uncharacterized protein 98.9 5E-07 1.7E-11 88.7 25.6 217 24-252 14-255 (276)
143 3sjl_D Methylamine dehydrogena 98.9 2.8E-07 9.6E-12 94.2 23.8 239 17-268 45-338 (386)
144 2xrc_A Human complement factor 98.9 1E-09 3.6E-14 118.7 5.7 68 415-491 208-275 (565)
145 2ojh_A Uncharacterized protein 98.9 8.8E-07 3E-11 86.0 25.2 222 24-253 21-262 (297)
146 3amr_A 3-phytase; beta-propell 98.8 3.8E-07 1.3E-11 91.1 21.9 187 18-209 41-265 (355)
147 1ajj_A LR5, low-density lipopr 98.8 1.4E-09 4.9E-14 70.9 2.8 34 410-444 2-35 (37)
148 1jmx_B Amine dehydrogenase; ox 98.8 6.8E-07 2.3E-11 89.6 24.1 152 49-209 4-177 (349)
149 2ojh_A Uncharacterized protein 98.8 6.2E-07 2.1E-11 87.1 21.7 201 9-214 46-265 (297)
150 2wg3_C Hedgehog-interacting pr 98.8 9.9E-07 3.4E-11 92.8 24.2 224 19-246 29-370 (463)
151 2jm4_A Relaxin receptor 1; LDL 98.8 3.3E-09 1.1E-13 71.7 3.4 36 408-444 5-41 (43)
152 1j8e_A Low-density lipoprotein 98.8 1E-09 3.5E-14 74.7 0.9 38 409-447 4-41 (44)
153 3no2_A Uncharacterized protein 98.8 1.1E-06 3.7E-11 86.2 23.1 192 57-257 5-203 (276)
154 3a7q_B Low-density lipoprotein 98.8 2.4E-09 8.2E-14 72.8 2.7 36 408-444 6-41 (44)
155 2m0p_A Low-density lipoprotein 98.8 1.2E-09 4.2E-14 76.2 1.2 36 408-444 5-40 (52)
156 1mda_H Methylamine dehydrogena 98.8 2.9E-07 9.9E-12 94.0 19.4 206 56-269 31-322 (368)
157 3dpr_E LDL-receptor class A 3; 98.8 5.4E-09 1.8E-13 69.0 4.0 34 410-444 1-36 (39)
158 1cr8_A Protein (LOW density li 98.8 5.4E-09 1.8E-13 70.3 3.9 35 409-444 3-38 (42)
159 2mad_H Methylamine dehydrogena 98.7 5.2E-06 1.8E-10 85.1 27.8 202 17-229 78-371 (373)
160 2hqs_A Protein TOLB; TOLB, PAL 98.7 2.6E-06 8.9E-11 88.7 25.5 194 17-215 191-395 (415)
161 1fwx_A Nitrous oxide reductase 98.7 4.2E-07 1.4E-11 96.9 19.5 194 55-249 100-361 (595)
162 2i1p_A Low-density lipoprotein 98.7 4E-09 1.4E-13 73.2 1.9 38 405-444 3-41 (48)
163 2ece_A 462AA long hypothetical 98.7 1.5E-06 5E-11 89.7 21.3 195 54-250 93-353 (462)
164 3amr_A 3-phytase; beta-propell 98.7 2.4E-06 8.3E-11 85.3 22.3 184 59-248 42-262 (355)
165 3azo_A Aminopeptidase; POP fam 98.7 3.4E-06 1.2E-10 93.1 25.9 233 19-254 94-374 (662)
166 2gtl_M Hemoglobin linker chain 98.7 3.6E-09 1.2E-13 97.0 1.0 49 523-572 52-103 (217)
167 1k7b_A Subgroup A ROUS sarcoma 98.7 7.8E-09 2.7E-13 71.4 2.3 35 409-444 6-45 (47)
168 2oiz_A Aromatic amine dehydrog 98.6 2.4E-06 8.3E-11 87.2 21.9 105 56-162 15-140 (361)
169 2knx_A Prolow-density lipoprot 98.6 1.2E-08 4.1E-13 71.1 3.1 36 408-444 5-41 (50)
170 3pe7_A Oligogalacturonate lyas 98.6 6.6E-06 2.3E-10 84.0 22.9 233 17-252 48-332 (388)
171 3q6k_A 43.2 kDa salivary prote 98.6 6.1E-06 2.1E-10 83.8 21.5 150 45-197 152-344 (381)
172 1jrf_A TVA LDL-A module, subgr 98.5 3.7E-08 1.3E-12 68.0 3.0 35 409-444 4-43 (47)
173 1gxr_A ESG1, transducin-like e 98.5 0.00067 2.3E-08 66.9 33.8 238 6-253 53-300 (337)
174 3c5m_A Oligogalacturonate lyas 98.5 1.1E-05 3.6E-10 82.5 20.5 196 17-215 48-281 (396)
175 2z3z_A Dipeptidyl aminopeptida 98.4 2.6E-05 8.8E-10 86.7 24.2 239 8-251 85-393 (706)
176 2z3z_A Dipeptidyl aminopeptida 98.4 2.2E-05 7.7E-10 87.2 23.2 228 17-251 133-437 (706)
177 4aez_A CDC20, WD repeat-contai 98.4 0.001 3.4E-08 68.2 34.0 228 16-253 104-340 (401)
178 3azo_A Aminopeptidase; POP fam 98.4 1.3E-05 4.6E-10 88.3 20.5 200 49-251 81-327 (662)
179 2ymu_A WD-40 repeat protein; u 98.4 0.00033 1.1E-08 75.3 31.0 229 18-258 317-547 (577)
180 2vdu_B TRNA (guanine-N(7)-)-me 98.4 0.0004 1.4E-08 72.6 30.3 195 46-247 104-337 (450)
181 3pe7_A Oligogalacturonate lyas 98.3 6.1E-05 2.1E-09 76.7 22.9 201 50-254 41-278 (388)
182 2ecf_A Dipeptidyl peptidase IV 98.3 0.00011 3.6E-09 82.1 26.8 233 16-256 120-421 (741)
183 1gxr_A ESG1, transducin-like e 98.3 0.00073 2.5E-08 66.6 30.3 217 17-243 110-331 (337)
184 2ymu_A WD-40 repeat protein; u 98.3 0.00059 2E-08 73.4 31.2 229 18-258 276-506 (577)
185 2aq5_A Coronin-1A; WD40 repeat 98.3 0.0007 2.4E-08 69.4 30.0 225 24-252 56-302 (402)
186 2xdw_A Prolyl endopeptidase; a 98.3 0.00058 2E-08 76.0 31.2 226 26-256 99-375 (710)
187 2gtl_N Extracellular hemoglobi 98.3 3.2E-07 1.1E-11 83.3 3.3 49 408-457 51-102 (220)
188 2ecf_A Dipeptidyl peptidase IV 98.3 7.2E-05 2.5E-09 83.5 23.3 205 45-256 37-328 (741)
189 1r5m_A SIR4-interacting protei 98.2 0.0013 4.3E-08 67.2 30.1 235 7-251 111-363 (425)
190 3ow8_A WD repeat-containing pr 98.2 0.0049 1.7E-07 61.1 32.9 227 24-258 57-288 (321)
191 3hxj_A Pyrrolo-quinoline quino 98.2 0.00016 5.3E-09 71.8 21.8 219 16-255 70-289 (330)
192 2gtl_M Hemoglobin linker chain 98.2 2.6E-07 8.9E-12 84.7 0.9 40 408-448 52-93 (217)
193 3o4h_A Acylamino-acid-releasin 98.2 4.1E-05 1.4E-09 83.1 18.4 188 18-215 35-234 (582)
194 3zwl_B Eukaryotic translation 98.2 0.0045 1.5E-07 61.6 32.2 222 7-237 35-279 (369)
195 4gqb_B Methylosome protein 50; 98.2 0.0005 1.7E-08 69.3 25.0 221 17-244 94-326 (344)
196 3ojy_A Complement component C8 98.2 1.2E-06 4.3E-11 93.4 5.7 50 519-572 60-115 (554)
197 3ei3_B DNA damage-binding prot 98.2 0.0014 4.7E-08 66.4 28.4 195 7-207 76-282 (383)
198 3hxj_A Pyrrolo-quinoline quino 98.2 0.00039 1.3E-08 68.9 23.6 209 17-243 108-318 (330)
199 3o4h_A Acylamino-acid-releasin 98.2 0.00011 3.7E-09 79.7 20.9 206 26-246 91-312 (582)
200 2pm9_A Protein WEB1, protein t 98.1 0.00043 1.5E-08 70.8 24.2 230 24-258 44-303 (416)
201 4g56_B MGC81050 protein; prote 98.1 0.00028 9.5E-09 71.5 22.4 234 7-246 97-340 (357)
202 2xyi_A Probable histone-bindin 98.1 0.00043 1.5E-08 71.9 24.2 219 24-246 150-407 (430)
203 3mkq_A Coatomer beta'-subunit; 98.1 0.0035 1.2E-07 70.3 33.6 248 6-259 15-269 (814)
204 1r5m_A SIR4-interacting protei 98.1 0.0017 5.8E-08 66.2 28.3 244 5-258 46-328 (425)
205 3ojy_B Complement component C8 98.1 2.1E-06 7.1E-11 91.7 5.7 46 519-569 62-110 (537)
206 4aez_A CDC20, WD repeat-contai 98.1 0.0033 1.1E-07 64.3 30.0 239 8-254 138-385 (401)
207 2gop_A Trilobed protease; beta 98.1 0.00052 1.8E-08 68.5 23.2 206 24-253 42-295 (347)
208 1yfq_A Cell cycle arrest prote 98.1 0.00076 2.6E-08 66.9 24.1 240 7-257 14-290 (342)
209 1pgu_A Actin interacting prote 98.1 0.0015 5.1E-08 70.5 28.3 245 6-257 20-291 (615)
210 2ynn_A Coatomer subunit beta'; 98.1 0.0092 3.1E-07 58.4 31.7 255 7-267 16-277 (304)
211 3ei3_B DNA damage-binding prot 98.1 0.0011 3.7E-08 67.2 25.5 204 45-256 74-289 (383)
212 1sq9_A Antiviral protein SKI8; 98.1 0.0042 1.4E-07 62.9 29.6 241 7-257 19-330 (397)
213 2xyi_A Probable histone-bindin 98.1 0.00082 2.8E-08 69.8 24.4 200 44-249 128-353 (430)
214 2vdu_B TRNA (guanine-N(7)-)-me 98.0 0.0055 1.9E-07 63.8 30.7 224 7-236 105-371 (450)
215 3zwl_B Eukaryotic translation 98.0 0.0068 2.3E-07 60.2 30.1 224 16-246 86-343 (369)
216 1k32_A Tricorn protease; prote 98.0 0.00057 2E-08 79.6 24.9 220 22-251 355-639 (1045)
217 1k8k_C P40, ARP2/3 complex 41 98.0 0.0063 2.2E-07 60.8 29.7 237 6-249 10-274 (372)
218 2pm9_A Protein WEB1, protein t 98.0 0.00048 1.7E-08 70.4 21.6 239 9-251 72-339 (416)
219 1k32_A Tricorn protease; prote 98.0 0.00028 9.5E-09 82.3 21.9 209 18-237 258-491 (1045)
220 1vyh_C Platelet-activating fac 98.0 0.0088 3E-07 61.5 31.0 244 8-258 112-378 (410)
221 3ow8_A WD repeat-containing pr 98.0 0.0074 2.5E-07 59.8 29.3 219 17-243 93-315 (321)
222 4a5s_A Dipeptidyl peptidase 4 98.0 0.00068 2.3E-08 75.8 24.1 230 17-249 74-400 (740)
223 1sq9_A Antiviral protein SKI8; 98.0 0.0033 1.1E-07 63.7 27.2 185 18-210 83-325 (397)
224 1xfd_A DIP, dipeptidyl aminope 98.0 0.00093 3.2E-08 74.2 24.7 229 16-247 72-393 (723)
225 3c5m_A Oligogalacturonate lyas 98.0 0.00042 1.4E-08 70.4 20.2 188 24-215 167-392 (396)
226 2aq5_A Coronin-1A; WD40 repeat 98.0 0.0013 4.5E-08 67.3 24.0 211 17-230 95-324 (402)
227 1erj_A Transcriptional repress 98.0 0.022 7.4E-07 58.1 32.6 247 7-258 67-350 (393)
228 1yr2_A Prolyl oligopeptidase; 97.9 0.0058 2E-07 68.3 29.9 223 25-255 133-400 (741)
229 4ery_A WD repeat-containing pr 97.8 0.026 8.9E-07 55.0 34.5 245 7-258 26-277 (312)
230 3vl1_A 26S proteasome regulato 97.8 0.014 4.9E-07 59.5 29.1 226 18-249 111-365 (420)
231 3odt_A Protein DOA1; ubiquitin 97.8 0.013 4.6E-07 56.6 27.6 229 17-258 30-264 (313)
232 1k8k_C P40, ARP2/3 complex 41 97.8 0.0064 2.2E-07 60.7 25.8 206 45-258 9-242 (372)
233 3vl1_A 26S proteasome regulato 97.8 0.016 5.4E-07 59.1 29.0 225 23-252 76-325 (420)
234 2bkl_A Prolyl endopeptidase; m 97.8 0.0056 1.9E-07 67.8 27.1 229 17-253 80-354 (695)
235 2xdw_A Prolyl endopeptidase; a 97.8 0.0082 2.8E-07 66.6 27.9 221 26-251 152-416 (710)
236 3mkq_A Coatomer beta'-subunit; 97.8 0.0085 2.9E-07 67.2 28.3 208 44-257 13-225 (814)
237 1xfd_A DIP, dipeptidyl aminope 97.7 0.0016 5.6E-08 72.1 21.0 189 18-208 127-396 (723)
238 3jrp_A Fusion protein of prote 97.7 0.014 4.7E-07 58.3 26.1 240 7-248 14-286 (379)
239 4e54_B DNA damage-binding prot 97.7 0.0016 5.6E-08 67.6 19.7 206 46-256 121-334 (435)
240 2ynn_A Coatomer subunit beta'; 97.7 0.042 1.4E-06 53.6 29.1 207 45-258 14-226 (304)
241 3iuj_A Prolyl endopeptidase; h 97.7 0.0066 2.3E-07 67.3 25.5 218 25-251 155-407 (693)
242 1pgu_A Actin interacting prote 97.7 0.012 4.3E-07 63.1 27.0 205 44-256 18-245 (615)
243 4a9v_A PHOX; hydrolase, beta-p 97.7 0.00025 8.5E-09 75.0 12.4 111 86-198 382-553 (592)
244 2gop_A Trilobed protease; beta 97.7 0.0044 1.5E-07 61.7 21.5 197 26-246 86-330 (347)
245 1vyh_C Platelet-activating fac 97.7 0.021 7E-07 58.7 27.1 205 45-257 109-335 (410)
246 4ery_A WD repeat-containing pr 97.7 0.051 1.7E-06 52.9 29.7 204 45-256 24-230 (312)
247 3ojy_B Complement component C8 97.7 2.8E-05 9.5E-10 83.0 4.9 45 415-469 70-115 (537)
248 4a11_B DNA excision repair pro 97.7 0.022 7.7E-07 57.4 26.7 231 18-252 114-368 (408)
249 3f3f_A Nucleoporin SEH1; struc 97.6 0.047 1.6E-06 53.2 28.4 198 7-207 14-249 (351)
250 3k26_A Polycomb protein EED; W 97.6 0.011 3.6E-07 58.8 23.7 143 17-161 35-191 (366)
251 1yr2_A Prolyl oligopeptidase; 97.6 0.0058 2E-07 68.3 23.6 219 25-251 189-443 (741)
252 4a11_B DNA excision repair pro 97.6 0.011 3.8E-07 59.7 23.9 206 43-252 42-279 (408)
253 4gqb_B Methylosome protein 50; 97.6 0.0084 2.9E-07 60.2 22.3 195 8-206 131-330 (344)
254 4e54_B DNA damage-binding prot 97.5 0.0097 3.3E-07 61.6 22.5 199 6-207 121-327 (435)
255 1p22_A F-BOX/WD-repeat protein 97.5 0.096 3.3E-06 53.8 29.4 226 6-250 135-366 (435)
256 3odt_A Protein DOA1; ubiquitin 97.5 0.07 2.4E-06 51.4 26.6 220 17-251 72-298 (313)
257 3i2n_A WD repeat-containing pr 97.5 0.048 1.6E-06 53.8 25.9 186 17-206 81-290 (357)
258 3frx_A Guanine nucleotide-bind 97.4 0.075 2.6E-06 52.2 26.5 203 18-228 32-246 (319)
259 4a9v_A PHOX; hydrolase, beta-p 97.4 0.00097 3.3E-08 70.5 12.8 106 43-149 382-550 (592)
260 4g56_B MGC81050 protein; prote 97.4 0.0078 2.7E-07 60.6 19.5 195 8-206 143-342 (357)
261 1nr0_A Actin interacting prote 97.4 0.075 2.6E-06 57.6 28.4 234 17-256 31-277 (611)
262 3i2n_A WD repeat-containing pr 97.4 0.036 1.2E-06 54.7 23.9 236 8-251 22-293 (357)
263 3sfz_A APAF-1, apoptotic pepti 97.4 0.15 5.2E-06 60.0 32.7 246 7-257 618-879 (1249)
264 4a5s_A Dipeptidyl peptidase 4 97.4 0.013 4.3E-07 65.5 21.8 193 18-214 125-407 (740)
265 3ojy_A Complement component C8 97.3 0.00012 4E-09 78.2 4.4 30 415-444 69-99 (554)
266 3v7d_B Cell division control p 97.3 0.2 6.9E-06 51.6 30.3 232 8-252 126-384 (464)
267 3jrp_A Fusion protein of prote 97.3 0.056 1.9E-06 53.7 24.1 202 44-251 11-242 (379)
268 1got_B GT-beta; complex (GTP-b 97.3 0.16 5.4E-06 50.3 29.0 205 17-228 110-321 (340)
269 1yfq_A Cell cycle arrest prote 97.3 0.053 1.8E-06 53.2 23.4 191 44-247 11-223 (342)
270 3sfz_A APAF-1, apoptotic pepti 97.3 0.07 2.4E-06 63.0 28.2 242 8-258 802-1083(1249)
271 2bkl_A Prolyl endopeptidase; m 97.3 0.029 9.8E-07 62.0 23.0 194 54-251 77-306 (695)
272 3dw8_B Serine/threonine-protei 97.2 0.083 2.8E-06 54.1 25.0 241 6-253 30-377 (447)
273 3k26_A Polycomb protein EED; W 97.2 0.08 2.7E-06 52.3 24.0 222 18-245 87-362 (366)
274 3f3f_A Nucleoporin SEH1; struc 97.2 0.11 3.7E-06 50.5 24.7 203 44-250 11-250 (351)
275 1z68_A Fibroblast activation p 97.2 0.0072 2.5E-07 67.0 17.6 218 25-250 90-394 (719)
276 4aow_A Guanine nucleotide-bind 97.2 0.19 6.5E-06 49.0 28.5 237 7-250 41-287 (340)
277 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.26 8.9E-06 50.6 32.2 232 8-258 123-357 (445)
278 2pbi_B Guanine nucleotide-bind 97.2 0.22 7.5E-06 49.7 29.2 180 44-228 154-335 (354)
279 4a2l_A BT_4663, two-component 97.2 0.14 4.6E-06 57.6 28.1 220 17-251 368-616 (795)
280 1got_B GT-beta; complex (GTP-b 97.2 0.21 7.2E-06 49.4 33.1 234 17-258 68-310 (340)
281 3v9f_A Two-component system se 97.2 0.1 3.6E-06 58.4 26.8 216 17-247 418-654 (781)
282 3iuj_A Prolyl endopeptidase; h 97.1 0.04 1.4E-06 60.9 22.8 184 26-215 209-413 (693)
283 3frx_A Guanine nucleotide-bind 97.1 0.19 6.4E-06 49.3 25.5 205 45-256 18-234 (319)
284 3mmy_A MRNA export factor; mRN 97.1 0.19 6.6E-06 49.4 25.6 117 43-162 38-160 (368)
285 3dwl_C Actin-related protein 2 97.1 0.027 9.1E-07 56.5 19.2 232 6-246 13-278 (377)
286 4gga_A P55CDC, cell division c 97.1 0.31 1.1E-05 49.7 31.4 233 16-258 116-362 (420)
287 3v7d_B Cell division control p 97.1 0.34 1.2E-05 49.9 32.4 225 18-254 175-426 (464)
288 1erj_A Transcriptional repress 97.1 0.31 1.1E-05 49.3 30.9 218 17-243 136-383 (393)
289 3t5o_A Complement component C6 97.1 0.00023 7.8E-09 81.1 3.4 42 524-569 118-161 (913)
290 1kb0_A Quinohemoprotein alcoho 97.0 0.33 1.1E-05 53.4 28.7 76 179-256 396-514 (677)
291 3iz6_a 40S ribosomal protein R 97.0 0.28 9.4E-06 49.4 26.2 198 46-246 159-372 (380)
292 1nr0_A Actin interacting prote 97.0 0.15 5.1E-06 55.2 25.6 205 44-256 18-228 (611)
293 2xe4_A Oligopeptidase B; hydro 97.0 0.15 5.3E-06 56.8 25.6 195 46-247 175-398 (751)
294 3iz6_a 40S ribosomal protein R 97.0 0.36 1.2E-05 48.6 26.4 243 8-256 70-336 (380)
295 3b7f_A Glycosyl hydrolase, BNR 97.0 0.14 4.9E-06 52.0 23.5 213 16-235 22-296 (394)
296 3dm0_A Maltose-binding peripla 97.0 0.16 5.5E-06 55.8 25.6 243 6-256 384-639 (694)
297 2pbi_B Guanine nucleotide-bind 97.0 0.36 1.2E-05 48.1 32.6 245 8-258 68-324 (354)
298 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.44 1.5E-05 48.8 31.2 223 18-256 171-398 (445)
299 2bou_A EGF-like module contain 96.9 0.00053 1.8E-08 59.7 3.9 117 274-391 3-142 (143)
300 2xzm_R RACK1; ribosome, transl 96.9 0.38 1.3E-05 47.5 25.2 198 45-247 22-242 (343)
301 3v9f_A Two-component system se 96.9 0.17 5.8E-06 56.6 25.0 215 24-251 332-570 (781)
302 3gre_A Serine/threonine-protei 96.9 0.18 6.1E-06 51.6 23.3 248 7-258 66-368 (437)
303 1p22_A F-BOX/WD-repeat protein 96.8 0.37 1.2E-05 49.4 25.6 195 47-258 136-334 (435)
304 2xzm_R RACK1; ribosome, transl 96.8 0.43 1.5E-05 47.1 27.1 225 17-251 40-287 (343)
305 1z68_A Fibroblast activation p 96.8 0.024 8.2E-07 62.7 17.4 186 18-208 123-394 (719)
306 1tl2_A L10, protein (tachylect 96.8 0.054 1.8E-06 50.1 16.4 132 17-158 5-159 (236)
307 2xe4_A Oligopeptidase B; hydro 96.8 0.1 3.5E-06 58.2 22.3 173 26-205 202-398 (751)
308 4aow_A Guanine nucleotide-bind 96.8 0.44 1.5E-05 46.3 26.0 207 45-256 39-253 (340)
309 1kli_L Factor VIIA; extrinsic 96.8 0.00049 1.7E-08 51.4 1.9 46 345-391 4-50 (69)
310 2jkh_L Factor X light chain; p 96.8 0.00045 1.5E-08 49.1 1.6 45 347-392 2-46 (55)
311 3jro_A Fusion protein of prote 96.7 0.1 3.4E-06 58.3 21.5 201 7-208 12-239 (753)
312 3dwl_C Actin-related protein 2 96.7 0.015 5.2E-07 58.4 13.0 154 46-206 13-176 (377)
313 3dm0_A Maltose-binding peripla 96.7 0.35 1.2E-05 53.0 25.2 206 44-253 382-596 (694)
314 3dw8_B Serine/threonine-protei 96.6 0.28 9.6E-06 50.0 22.8 158 8-169 181-380 (447)
315 1yo8_A Thrombospondin-2; EGF, 96.5 0.0054 1.8E-07 66.0 8.9 110 279-393 16-155 (634)
316 2oaj_A Protein SNI1; WD40 repe 96.5 0.26 8.8E-06 56.2 23.6 201 45-253 18-246 (902)
317 1lmj_A Fibrillin 1; EGF, calci 96.5 0.0012 4E-08 51.9 2.6 75 306-382 3-82 (86)
318 1kig_L Factor XA; glycoprotein 96.5 0.0016 5.4E-08 45.5 2.9 39 353-391 4-42 (51)
319 2ad6_A Methanol dehydrogenase 96.5 0.97 3.3E-05 48.5 26.3 29 49-77 239-282 (571)
320 1tl2_A L10, protein (tachylect 96.4 0.41 1.4E-05 44.2 19.6 151 82-246 35-207 (236)
321 3gre_A Serine/threonine-protei 96.4 0.46 1.6E-05 48.4 22.6 208 44-258 63-301 (437)
322 3b7f_A Glycosyl hydrolase, BNR 96.4 0.66 2.2E-05 47.0 23.5 214 46-271 116-393 (394)
323 3lrv_A PRE-mRNA-splicing facto 96.3 0.62 2.1E-05 45.9 22.4 158 45-207 126-292 (343)
324 4a2l_A BT_4663, two-component 96.3 1.8 6.2E-05 48.2 28.6 224 18-252 185-439 (795)
325 2vj3_A Neurogenic locus notch 96.3 0.0062 2.1E-07 52.2 6.2 105 275-395 14-128 (135)
326 1kv9_A Type II quinohemoprotei 96.3 1.8 6.2E-05 47.3 27.7 76 179-256 384-495 (668)
327 3jro_A Fusion protein of prote 96.2 0.24 8.3E-06 55.1 20.5 200 45-250 10-239 (753)
328 1uzk_A Fibrillin-1; glycoprote 96.2 0.00095 3.3E-08 59.4 0.5 101 278-383 15-159 (162)
329 2bz6_L Blood coagulation facto 96.2 0.0017 5.7E-08 45.7 1.6 39 353-391 5-44 (53)
330 3q7m_A Lipoprotein YFGL, BAMB; 96.1 1.3 4.4E-05 44.2 31.0 217 17-253 54-300 (376)
331 4h5i_A Guanine nucleotide-exch 96.1 1.1 3.6E-05 44.9 22.9 195 47-246 136-340 (365)
332 4h5i_A Guanine nucleotide-exch 96.1 0.24 8.3E-06 49.6 18.1 182 18-206 147-342 (365)
333 2ad6_A Methanol dehydrogenase 96.0 2.1 7.2E-05 45.8 29.7 77 179-257 389-502 (571)
334 4ggc_A P55CDC, cell division c 96.0 1.2 4.1E-05 42.6 31.3 248 8-266 29-290 (318)
335 2oit_A Nucleoporin 214KDA; NH2 96.0 0.55 1.9E-05 48.4 20.5 121 46-168 94-229 (434)
336 1z6c_A Vitamin K-dependent pro 95.9 0.0045 1.5E-07 48.6 3.1 73 306-382 3-80 (87)
337 1z6c_A Vitamin K-dependent pro 95.9 0.0094 3.2E-07 46.7 4.8 47 346-393 3-50 (87)
338 2hes_X YDR267CP; beta-propelle 95.8 1.5 5.2E-05 42.8 27.2 223 24-250 33-281 (330)
339 2oaj_A Protein SNI1; WD40 repe 95.8 1.2 4E-05 50.7 24.2 192 7-207 20-242 (902)
340 3q7m_A Lipoprotein YFGL, BAMB; 95.8 1.7 5.9E-05 43.2 29.0 219 18-255 105-343 (376)
341 3mmy_A MRNA export factor; mRN 95.8 1.6 5.5E-05 42.5 24.1 202 17-228 99-324 (368)
342 3ott_A Two-component system se 95.7 3.2 0.00011 45.9 26.9 224 7-250 24-261 (758)
343 3t5o_A Complement component C6 95.7 0.0044 1.5E-07 70.5 3.5 30 415-444 122-151 (913)
344 1yo8_A Thrombospondin-2; EGF, 95.7 0.04 1.4E-06 59.3 10.4 105 307-419 4-132 (634)
345 1kb0_A Quinohemoprotein alcoho 95.7 2.6 8.7E-05 46.2 25.2 55 179-235 480-536 (677)
346 2w2n_E LDL receptor, low-densi 95.6 0.0046 1.6E-07 50.6 2.2 48 343-392 26-73 (107)
347 3fm0_A Protein CIAO1; WDR39,SG 95.6 2 6.7E-05 42.3 24.3 195 46-246 18-222 (345)
348 2pm7_B Protein transport prote 95.6 1.7 5.9E-05 41.6 25.1 198 45-247 10-236 (297)
349 2oit_A Nucleoporin 214KDA; NH2 95.5 1.4 4.8E-05 45.3 21.4 162 44-207 149-333 (434)
350 3fm0_A Protein CIAO1; WDR39,SG 95.5 2.1 7.2E-05 42.1 29.0 179 18-201 30-219 (345)
351 2bz6_L Blood coagulation facto 95.4 0.0085 2.9E-07 42.0 2.8 29 274-305 7-37 (53)
352 1lmj_A Fibrillin 1; EGF, calci 95.4 0.006 2.1E-07 47.7 2.2 67 346-419 3-71 (86)
353 4gga_A P55CDC, cell division c 95.4 2.7 9.3E-05 42.5 31.1 230 7-244 150-390 (420)
354 3vu4_A KMHSV2; beta-propeller 95.3 2.6 8.8E-05 41.7 28.0 229 5-249 20-271 (355)
355 2pm7_B Protein transport prote 95.2 2.4 8E-05 40.6 29.2 199 8-207 13-238 (297)
356 3zwu_A Alkaline phosphatase PH 95.2 0.15 5.2E-06 54.6 12.7 105 43-148 382-549 (592)
357 1kig_L Factor XA; glycoprotein 95.2 0.012 3.9E-07 41.0 2.7 29 274-305 6-35 (51)
358 1kli_L Factor VIIA; extrinsic 95.1 0.011 3.9E-07 43.9 2.8 30 274-305 13-43 (69)
359 1z1y_A Ookinete surface protei 95.1 0.004 1.4E-07 56.6 0.3 104 279-392 17-143 (186)
360 1dx5_I Thrombomodulin; serine 95.1 0.003 1E-07 52.8 -0.6 97 274-380 10-112 (118)
361 2w2n_E LDL receptor, low-densi 95.0 0.0069 2.4E-07 49.6 1.5 66 274-382 37-103 (107)
362 1yiq_A Quinohemoprotein alcoho 95.0 5.2 0.00018 43.8 26.7 57 198-256 455-512 (689)
363 1sqj_A OXG-RCBH, oligoxylogluc 94.9 6 0.0002 44.1 27.4 232 23-257 35-340 (789)
364 2jkh_L Factor X light chain; p 94.9 0.017 5.7E-07 40.8 3.1 29 274-305 9-38 (55)
365 1w6s_A Methanol dehydrogenase 94.8 5.2 0.00018 43.0 26.9 30 225-255 480-509 (599)
366 2vj3_A Neurogenic locus notch 94.8 0.037 1.3E-06 47.2 5.5 77 306-393 5-88 (135)
367 3vu4_A KMHSV2; beta-propeller 94.6 2.3 8E-05 42.0 19.5 95 64-161 156-270 (355)
368 3lrv_A PRE-mRNA-splicing facto 94.6 3.6 0.00012 40.2 22.7 140 17-160 140-290 (343)
369 3ott_A Two-component system se 94.6 6.2 0.00021 43.6 24.7 184 15-213 72-266 (758)
370 1apq_A Complement protease C1R 94.3 0.02 6.7E-07 40.0 2.2 30 354-383 19-48 (53)
371 2w86_A Fibrillin-1, fibrillin1 94.2 0.0097 3.3E-07 51.8 0.5 39 343-382 103-143 (147)
372 1x7a_L Coagulation factor IX, 94.1 0.065 2.2E-06 46.4 5.6 75 306-388 48-127 (146)
373 3zwu_A Alkaline phosphatase PH 94.1 0.25 8.6E-06 52.9 11.1 108 86-195 382-550 (592)
374 3a0f_A Xyloglucanase; beta-pro 94.0 3.4 0.00012 45.9 20.9 165 43-209 19-215 (763)
375 2hes_X YDR267CP; beta-propelle 94.0 4.8 0.00017 39.1 26.0 193 45-245 15-226 (330)
376 2bou_A EGF-like module contain 94.0 0.025 8.5E-07 48.9 2.6 72 343-419 40-122 (143)
377 3h5c_B Vitamin K-dependent pro 94.0 0.064 2.2E-06 53.0 6.0 79 307-392 6-89 (317)
378 2wph_E Coagulation factor IXA 93.8 0.031 1.1E-06 40.1 2.4 30 274-305 7-37 (59)
379 2wph_E Coagulation factor IXA 93.8 0.028 9.6E-07 40.3 2.1 35 353-387 5-40 (59)
380 1zgk_A Kelch-like ECH-associat 93.7 5.3 0.00018 38.5 23.5 200 25-237 39-270 (308)
381 1emn_A Fibrillin; extracellula 93.6 0.087 3E-06 40.5 4.9 44 346-393 5-49 (82)
382 1emn_A Fibrillin; extracellula 93.1 0.041 1.4E-06 42.4 2.2 70 306-381 5-78 (82)
383 1sqj_A OXG-RCBH, oligoxylogluc 93.0 7.3 0.00025 43.4 21.3 161 45-208 15-202 (789)
384 2j04_A TAU60, YPL007P, hypothe 92.9 7 0.00024 41.6 19.7 219 5-250 16-255 (588)
385 1kv9_A Type II quinohemoprotei 92.8 11 0.00039 40.9 22.2 16 132-147 383-398 (668)
386 1aut_L Activated protein C; se 92.6 0.063 2.1E-06 44.3 2.9 36 347-383 55-90 (114)
387 3bg1_A Protein SEC13 homolog; 92.4 8.1 0.00028 37.1 22.4 189 18-207 27-247 (316)
388 2cn3_A Xyloglucanase, beta-1,4 92.4 6.5 0.00022 43.4 19.8 208 46-256 24-289 (737)
389 2cn3_A Xyloglucanase, beta-1,4 92.3 16 0.00054 40.3 26.7 227 24-256 44-343 (737)
390 4d90_A EGF-like repeat and dis 92.2 0.11 3.7E-06 44.6 4.1 88 279-377 13-127 (143)
391 1flg_A Protein (quinoprotein e 92.1 14 0.00049 39.4 23.9 76 179-256 415-523 (582)
392 2c4f_L Coagulation factor VII 91.8 0.19 6.6E-06 43.1 5.2 74 306-387 47-129 (142)
393 3ii7_A Kelch-like protein 7; p 91.0 11 0.00038 36.0 25.2 213 25-249 24-272 (306)
394 2vpj_A Kelch-like protein 12; 91.0 11 0.00038 35.8 24.5 200 25-237 31-261 (301)
395 1nfu_B Coagulation factor XA, 90.9 0.067 2.3E-06 48.6 1.2 73 306-386 42-120 (195)
396 4gq1_A NUP37; propeller, trans 90.8 14 0.00048 36.8 20.2 179 24-207 165-389 (393)
397 2vh0_B Activated factor XA lig 90.3 0.089 3E-06 44.8 1.5 73 306-386 42-120 (134)
398 1yiq_A Quinohemoprotein alcoho 90.0 25 0.00084 38.3 22.8 17 132-148 391-407 (689)
399 4gq1_A NUP37; propeller, trans 89.9 17 0.00057 36.2 22.7 96 24-119 110-218 (393)
400 3f1s_B Vitamin K-dependent pro 89.5 0.26 9E-06 47.7 4.3 46 346-391 2-47 (283)
401 2j04_B YDR362CP, TAU91; beta p 89.4 11 0.00038 39.6 17.3 182 18-207 227-428 (524)
402 3bg1_A Protein SEC13 homolog; 89.3 16 0.00054 35.0 20.5 117 45-163 14-137 (316)
403 3f6k_A Sortilin; protein sorti 89.2 24 0.00082 38.3 19.8 161 61-236 59-240 (685)
404 3a0f_A Xyloglucanase; beta-pro 89.2 30 0.001 38.2 24.6 231 22-256 40-351 (763)
405 1z1y_A Ookinete surface protei 89.1 0.11 3.9E-06 46.8 1.2 88 288-382 72-174 (186)
406 1flg_A Protein (quinoprotein e 89.0 26 0.0009 37.3 20.8 16 133-148 415-430 (582)
407 2xbg_A YCF48-like protein; pho 88.6 18 0.00063 35.0 22.7 190 46-246 123-319 (327)
408 1x7a_L Coagulation factor IX, 88.4 0.25 8.6E-06 42.6 2.9 46 346-398 48-95 (146)
409 1tpg_A T-plasminogen activator 88.2 0.33 1.1E-05 38.1 3.2 72 289-377 1-80 (91)
410 2j04_B YDR362CP, TAU91; beta p 87.4 31 0.001 36.2 21.4 193 44-243 207-422 (524)
411 2kl7_A Fibulin-4; secreted, ca 87.2 0.36 1.2E-05 35.9 2.7 34 346-380 3-39 (71)
412 2xn4_A Kelch-like protein 2; s 86.9 21 0.00073 33.8 22.9 212 25-249 30-276 (302)
413 1w6s_A Methanol dehydrogenase 86.4 38 0.0013 36.2 27.9 18 131-148 394-411 (599)
414 4ggc_A P55CDC, cell division c 86.2 22 0.00076 33.3 30.9 228 8-243 71-309 (318)
415 2uvk_A YJHT; unknown function, 86.1 26 0.0009 34.1 21.5 200 24-236 30-323 (357)
416 1dx5_I Thrombomodulin; serine 86.0 0.14 5E-06 42.3 -0.0 78 306-393 4-85 (118)
417 2woz_A Kelch repeat and BTB do 85.4 21 0.00074 34.1 15.6 194 27-235 80-313 (318)
418 1apq_A Complement protease C1R 85.4 0.43 1.5E-05 32.9 2.2 29 274-305 20-49 (53)
419 3sbq_A Nitrous-oxide reductase 85.1 41 0.0014 35.5 18.5 139 88-228 323-500 (638)
420 4asc_A Kelch repeat and BTB do 83.9 31 0.001 32.9 18.5 155 27-194 69-250 (315)
421 3h5c_B Vitamin K-dependent pro 83.8 1.1 3.9E-05 43.8 5.4 42 346-393 5-48 (317)
422 1nfu_B Coagulation factor XA, 83.0 0.15 5E-06 46.4 -1.4 62 345-419 41-105 (195)
423 1xip_A Nucleoporin NUP159; bet 82.9 29 0.00098 34.9 15.5 138 11-164 44-193 (388)
424 2j04_A TAU60, YPL007P, hypothe 81.1 60 0.0021 34.4 24.0 169 44-227 85-273 (588)
425 1szb_A Mannose binding lectin- 78.1 0.78 2.7E-05 40.5 1.7 31 356-386 136-166 (170)
426 1edm_B Factor IX; epidermal gr 77.7 0.68 2.3E-05 29.6 0.9 29 346-377 3-33 (39)
427 1egf_A Epidermal growth factor 77.3 1.3 4.6E-05 30.5 2.4 31 347-377 4-38 (53)
428 4asc_A Kelch repeat and BTB do 76.2 54 0.0019 31.1 21.6 206 18-236 6-250 (315)
429 2xn4_A Kelch-like protein 2; s 75.3 55 0.0019 30.8 19.1 172 25-209 77-278 (302)
430 2xbg_A YCF48-like protein; pho 75.1 61 0.0021 31.2 28.0 198 46-258 81-287 (327)
431 1nzi_A Complement C1S componen 74.9 1.2 4E-05 38.7 1.9 31 355-385 126-156 (159)
432 4d90_A EGF-like repeat and dis 74.0 3.5 0.00012 34.9 4.7 41 346-392 52-101 (143)
433 1xip_A Nucleoporin NUP159; bet 73.7 77 0.0026 31.7 19.3 168 45-233 38-227 (388)
434 1uzk_A Fibrillin-1; glycoprote 73.2 1.7 5.8E-05 37.9 2.5 54 288-341 98-159 (162)
435 3u7u_G Neuregulin 1; signaling 72.1 1.9 6.4E-05 30.1 2.0 29 346-377 8-43 (55)
436 3ii7_A Kelch-like protein 7; p 71.0 70 0.0024 30.1 21.5 144 98-250 54-226 (306)
437 1a3p_A Epidermal growth factor 70.4 3.1 0.00011 27.4 2.7 22 356-377 10-35 (45)
438 2zux_A YESW protein; beta-prop 69.3 1.2E+02 0.004 32.0 18.7 108 48-161 293-422 (591)
439 1aut_L Activated protein C; se 68.9 5.4 0.00018 32.3 4.5 52 288-340 33-89 (114)
440 2vh0_B Activated factor XA lig 68.2 2.6 8.7E-05 35.5 2.4 59 279-341 55-117 (134)
441 2hz6_A Endoplasmic reticulum t 67.8 5.8 0.0002 39.5 5.5 135 99-252 48-195 (369)
442 4fbr_A Lectin, myxobacterial h 66.9 0.73 2.5E-05 43.7 -1.4 87 288-391 51-140 (267)
443 2uvk_A YJHT; unknown function, 66.8 94 0.0032 29.9 20.8 173 56-237 19-260 (357)
444 2vpj_A Kelch-like protein 12; 65.8 88 0.003 29.2 22.4 144 98-250 61-232 (301)
445 1gl4_A Nidogen-1, entactin; im 63.2 1.4 4.8E-05 42.1 -0.2 40 346-388 5-46 (285)
446 2w86_A Fibrillin-1, fibrillin1 61.3 3.7 0.00013 35.0 2.2 50 290-340 88-143 (147)
447 3f1s_B Vitamin K-dependent pro 57.9 5.2 0.00018 38.3 2.8 29 274-305 11-40 (283)
448 2zuy_A YESX protein; beta-prop 54.4 2.2E+02 0.0075 30.1 17.5 131 69-206 274-426 (620)
449 2zux_A YESW protein; beta-prop 53.5 2.2E+02 0.0075 29.9 16.6 131 69-206 270-422 (591)
450 4fbr_A Lectin, myxobacterial h 53.1 1 3.5E-05 42.7 -3.0 87 288-392 118-208 (267)
451 1hae_A Heregulin-alpha; growth 52.7 4.1 0.00014 29.1 0.8 35 355-392 12-53 (63)
452 1zgk_A Kelch-like ECH-associat 51.7 1.6E+02 0.0054 27.6 19.2 174 25-211 90-291 (308)
453 3fcs_B Integrin beta-3; beta p 50.5 34 0.0012 37.1 8.0 83 288-377 453-554 (690)
454 3f6k_A Sortilin; protein sorti 49.8 2.8E+02 0.0095 30.0 21.5 174 25-212 118-311 (685)
455 2vj2_A Jagged-1; signalling, p 48.6 5.1 0.00017 35.1 0.9 30 346-377 131-163 (169)
456 4hvt_A Ritya.17583.B, post-pro 48.5 2.9E+02 0.01 29.9 20.3 112 55-169 298-436 (711)
457 2woz_A Kelch repeat and BTB do 48.5 1.8E+02 0.0061 27.4 23.3 203 18-236 17-260 (318)
458 1k36_A Epiregulin; EGF-like fo 48.4 4.3 0.00015 27.0 0.3 30 348-377 5-37 (46)
459 2k2s_B Micronemal protein 6; m 43.8 5.3 0.00018 28.4 0.2 29 346-377 11-43 (61)
460 1szb_A Mannose binding lectin- 42.6 11 0.00037 32.9 2.1 27 276-305 137-164 (170)
461 2c4f_L Coagulation factor VII 42.4 12 0.00041 31.6 2.3 29 274-305 96-126 (142)
462 3sbq_A Nitrous-oxide reductase 37.8 3.9E+02 0.013 28.2 21.0 184 18-206 144-407 (638)
463 1nql_B Epidermal growth factor 37.3 10 0.00035 26.0 0.8 24 354-377 11-38 (53)
464 1g1s_A P-selectin; selectin, l 36.9 8.3 0.00028 33.2 0.4 34 355-392 125-160 (162)
465 1k3i_A Galactose oxidase precu 32.8 4.7E+02 0.016 27.6 18.3 96 26-125 220-329 (656)
466 1nzi_A Complement C1S componen 32.6 20 0.0007 30.5 2.2 29 274-305 126-155 (159)
467 3ei3_A DNA damage-binding prot 28.0 7.4E+02 0.025 28.5 24.8 130 108-245 862-995 (1158)
468 2zwa_A Leucine carboxyl methyl 22.8 7.2E+02 0.025 26.5 21.3 196 56-251 397-637 (695)
469 3gr5_A ESCC; secretin, type II 22.3 68 0.0023 27.4 3.7 63 87-149 66-135 (156)
470 1k3i_A Galactose oxidase precu 21.5 7.2E+02 0.025 26.1 12.9 102 47-149 401-529 (656)
471 3s9j_A Member of DUF4221 famil 21.2 5.9E+02 0.02 24.9 20.6 142 101-246 41-226 (369)
472 1s1d_A Apyrase; adpase, five-b 21.0 4.7E+02 0.016 25.1 9.4 52 186-238 103-160 (331)
No 1
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=9e-52 Score=425.49 Aligned_cols=297 Identities=38% Similarity=0.724 Sum_probs=274.7
Q ss_pred CCCC----CCCceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC
Q psy952 1 MPGW----DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS 76 (573)
Q Consensus 1 ~~g~----dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g 76 (573)
+||| |+++|++.. ++++|+|++.+.|+++++++..++.++..+.+|.+|+||+.+++|||+|...++|+|++++|
T Consensus 26 ~~g~~l~~d~~~C~~~~-~~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g 104 (349)
T 3v64_C 26 EAGYELRPDRRSCKALG-PEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNG 104 (349)
T ss_dssp CTTEEECTTSSCEEESS-SCCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCccCCCCCCcccccc-cCceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCC
Confidence 3666 899999975 58999999999999999999988888888999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeE
Q psy952 77 TEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYI 155 (573)
Q Consensus 77 ~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I 155 (573)
+..+.++..++..|.|||+||.+++|||+|...++|++++++|..+++++ ..+..|++|||||..|+|||+|++..++|
T Consensus 105 ~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 105 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 88888888888999999999999999999999999999999999988877 57889999999999999999999865899
Q ss_pred EEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEe
Q psy952 156 GKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWT 235 (573)
Q Consensus 156 ~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywt 235 (573)
+|+++||+.+++++ ...+.+|+|||+|+.+++|||+|+..++|++++++|+.+++++... +.+|+||++++++||||
T Consensus 185 ~r~~~dG~~~~~~~--~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~t 261 (349)
T 3v64_C 185 EASSMDGSGRRIIA--DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWT 261 (349)
T ss_dssp EEEETTSCSCEESC--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEE
T ss_pred EEEeCCCCCcEEEE--ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEe
Confidence 99999999999888 6789999999999999999999999999999999999998888765 88999999999999999
Q ss_pred cCCCCceEEEeccCCcceEEEcccCCCceeeeeeecCC------------CcccccccccccCccceee-eccceeecCC
Q psy952 236 DWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK------------GTTRHAWLTAHRGSTTVAD-MIRSVYLGSG 302 (573)
Q Consensus 236 d~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~------------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d 302 (573)
||.+++|.+++|.+|+.++++...+..|++|+|+|+.+ ++|+|+|++.+ ..++| ||.+|. ..|
T Consensus 262 d~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~qp~~~n~C~~~~g~C~~lCl~~~---~~~~C~C~~g~~-~~d 337 (349)
T 3v64_C 262 DWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSG---QNYTCACPTGFR-KIN 337 (349)
T ss_dssp ETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGGGSCCCCCTTTTGGGGCSSEEECCT---TSCEEECCTTEE-EET
T ss_pred cCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccccCccccCcccCCCCCcccEeecCC---CCCeeECCCCCc-CCC
Confidence 99999999999999999999988889999999999863 67999999998 47999 999999 777
Q ss_pred CCC
Q psy952 303 NKE 305 (573)
Q Consensus 303 ~~~ 305 (573)
+++
T Consensus 338 ~~~ 340 (349)
T 3v64_C 338 SHA 340 (349)
T ss_dssp TTE
T ss_pred CCc
Confidence 664
No 2
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=2.7e-51 Score=429.41 Aligned_cols=301 Identities=31% Similarity=0.635 Sum_probs=273.2
Q ss_pred CCC----CCCceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC-
Q psy952 2 PGW----DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS- 76 (573)
Q Consensus 2 ~g~----dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g- 76 (573)
||| ++++|++. ++.+||++++++.|+++++++..++.++..+..|.+|+||+.+++|||+|...++|++++++|
T Consensus 66 ~g~~~~~~~~~C~~~-~~~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~ 144 (400)
T 3p5b_L 66 EGFQLDPHTKACKAV-GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRA 144 (400)
T ss_dssp TTCCCCTTTSSCCCS-TTSCEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC---
T ss_pred ccccccccccceeec-cccceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccC
Confidence 566 78999987 478999999999999999999988888889999999999999999999999999999999998
Q ss_pred ---CcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCc
Q psy952 77 ---TEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQ 152 (573)
Q Consensus 77 ---~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~ 152 (573)
+..++++..++..|.||||||++++|||+|...++|++++++|..+++++ ..+..|++|||||..|+||||||+..
T Consensus 145 ~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~ 224 (400)
T 3p5b_L 145 HGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP 224 (400)
T ss_dssp ---CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSS
T ss_pred CCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCC
Confidence 45667777788999999999999999999999999999999999988887 47888999999999999999999877
Q ss_pred CeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-CccceeEEEeeeCCe
Q psy952 153 AYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVFALTLFEDH 231 (573)
Q Consensus 153 ~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~~~~~p~~ia~~~~~ 231 (573)
++|+|++|+|+.+++++ ...+.+|+|||||+.+++|||+|+..++|++++++|..+++++.. ..+.+|+||++++++
T Consensus 225 ~~I~~~~~dG~~~~~~~--~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~ 302 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 302 (400)
T ss_dssp CCEEEEETTSCSCEEEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTE
T ss_pred CEEEEEeCCCCccEEEE--ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCE
Confidence 89999999999999998 688999999999999999999999999999999999999888864 237899999999999
Q ss_pred EEEecCCCCceEEEeccCCcceEEEcccCCCceeeeeeecCC---------------Cccccccccccc---Cccceee-
Q psy952 232 IYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK---------------GTTRHAWLTAHR---GSTTVAD- 292 (573)
Q Consensus 232 lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~---------------~~Cs~lCl~~~~---~~~~~~C- 292 (573)
|||+||.+++|++++|.+|+.+.+|...+..|++|+|+|+.+ ++|+|+|++.+. .+..++|
T Consensus 303 lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~ 382 (400)
T 3p5b_L 303 VFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCA 382 (400)
T ss_dssp EEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGGSCCCCCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEE
T ss_pred EEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeeccCCCCCCccccccCCCcCcCCeecCCCcccCCCCCeeEE
Confidence 999999999999999999999999988888999999999752 589999999872 1236899
Q ss_pred eccceeecCCCCC
Q psy952 293 MIRSVYLGSGNKE 305 (573)
Q Consensus 293 Cp~~~~l~~d~~~ 305 (573)
||.+|.|..|+++
T Consensus 383 C~~g~~l~~d~~~ 395 (400)
T 3p5b_L 383 CPDGMLLARDMRS 395 (400)
T ss_dssp CCTTCEECTTSSS
T ss_pred CCCCCEECCCCCc
Confidence 9999999988775
No 3
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=5.5e-51 Score=413.48 Aligned_cols=288 Identities=36% Similarity=0.689 Sum_probs=262.5
Q ss_pred CCCCEEEEEecccEEEEEcCCC--ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-eEEEcCCCCCc
Q psy952 14 SIKPWLIFSNKYYVRNMSLDAT--QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-ERVIRHDSHGL 90 (573)
Q Consensus 14 ~~~~~l~~s~~~~I~~i~l~g~--~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~i~~~~~~~p 90 (573)
+++|||||++++.|+++++++. .+++++.++.++.+|+||+.+++|||+|...++|+|++++|+.. +.++..++..|
T Consensus 2 g~~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 2 GSAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp --CCEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred CCccEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 5789999999999999999987 46677788889999999999999999999999999999998753 45666778899
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~ 169 (573)
.|||+||.+++|||+|...++|++++++|..+++++ ..+..|++|||||..|+|||+||+..++|+|+++||+.+++++
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 999999999999999999999999999999988887 6888999999999999999999987789999999999999998
Q ss_pred ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccC
Q psy952 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 170 ~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~ 249 (573)
...+.+|+||++|+.+++|||+|+..++|++++++|+.+++++.+. +.+|+||+++++.|||+||.+++|.++++.+
T Consensus 162 --~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 162 --NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp --CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC-CSCEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred --ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC-CCCceEEEEeCCEEEEEecCCCeEEEEECCC
Confidence 6789999999999999999999999999999999999999988755 8999999999999999999999999999999
Q ss_pred CcceEEEcccCCCceeeeeeecCC------------CcccccccccccCccceee-eccceeecCCCCC
Q psy952 250 GRDYRVLRNTTHRPYDIHVYHPLK------------GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 250 g~~~~~l~~~~~~p~~i~v~~~~~------------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
|+..++|...+..|++|+|+|+.+ ++|+|+|++.+ +...++| ||.+|.|..|+++
T Consensus 239 G~~~~~i~~~~~~P~~i~v~~~~~q~~~~n~C~~~ng~Cs~~C~~~~-~~~~~~C~C~~g~~l~~d~~~ 306 (318)
T 3sov_A 239 GEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSP-VKPFYQCACPTGVKLLENGKT 306 (318)
T ss_dssp CCSCEEEECCCSSCCCEEEECGGGSCCCCCTTTTTGGGCSSEEEECS-STTSEEEECSTTCCBCTTSSC
T ss_pred CCceEEEeCCCCCCcEEEEeccccccccccccccCCCCcceEEecCC-CCCCeEEECCCCCEECCCCCC
Confidence 999988888888999999999753 78999999988 3346899 9999999988775
No 4
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-50 Score=422.23 Aligned_cols=296 Identities=38% Similarity=0.728 Sum_probs=274.2
Q ss_pred CCC----CCCceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC
Q psy952 2 PGW----DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST 77 (573)
Q Consensus 2 ~g~----dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~ 77 (573)
||| ||++|++.. ++++|++++++.|+++++++..++.++..+..|.||+||+.+++|||+|...++|+|++++|+
T Consensus 70 ~g~~l~~d~~~C~~~~-~~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 70 AGYELRPDRRSCKALG-PEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp TTEEECTTSSCEEECS-SCCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEcCCCCeECCcc-ccceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 676 699999975 589999999999999999998888888899999999999999999999999999999999998
Q ss_pred cceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEE
Q psy952 78 EKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIG 156 (573)
Q Consensus 78 ~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~ 156 (573)
..+.++..++..|.||||||.+++|||+|...++|++++++|..+++++ ..+..|++|||||..|+|||+|++..++|+
T Consensus 149 ~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 149 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 8888888888999999999999999999999999999999999988877 478899999999999999999998668999
Q ss_pred EEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEec
Q psy952 157 KIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTD 236 (573)
Q Consensus 157 r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd 236 (573)
|++++|+.+++++ ...+.+|+|||||+.+++|||+|+..++|++++++|+.+++++... +.+|+||+++++.|||+|
T Consensus 229 r~~~dG~~~~~~~--~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td 305 (386)
T 3v65_B 229 ASSMDGSGRRIIA--DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTD 305 (386)
T ss_dssp EEETTSCSCEEEE--CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEE
T ss_pred EEeCCCCCcEEEE--ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEee
Confidence 9999999999998 6889999999999999999999999999999999999998888765 889999999999999999
Q ss_pred CCCCceEEEeccCCcceEEEcccCCCceeeeeeecCC------------CcccccccccccCccceee-eccceeecCCC
Q psy952 237 WNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK------------GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGN 303 (573)
Q Consensus 237 ~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~------------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~ 303 (573)
|.+++|.+++|.+|+.+++|...+..|++|+++|+.+ ++|+|+||+.+ ..++| ||.+|. ..|+
T Consensus 306 ~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~~~~n~C~~~ng~C~~lCl~~~---~~~~C~C~~g~~-~~d~ 381 (386)
T 3v65_B 306 WHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSG---QNYTCACPTGFR-KINS 381 (386)
T ss_dssp TTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSCCCCCTTTTSCTTSSSEEECCS---SSCEEECCTTCB-CSSS
T ss_pred CCCCeEEEEECCCCcceEEEccCCCCCceEEEEchhcCcCCcCccccCCCCCCceeeeCC---CCCeeECCCCCc-CCCC
Confidence 9999999999999999999988889999999999863 67999999998 47999 999999 7776
Q ss_pred CC
Q psy952 304 KE 305 (573)
Q Consensus 304 ~~ 305 (573)
++
T Consensus 382 ~~ 383 (386)
T 3v65_B 382 HA 383 (386)
T ss_dssp SC
T ss_pred Cc
Confidence 64
No 5
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=4.2e-50 Score=449.84 Aligned_cols=302 Identities=31% Similarity=0.630 Sum_probs=273.6
Q ss_pred CCCC----CCCceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC
Q psy952 1 MPGW----DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS 76 (573)
Q Consensus 1 ~~g~----dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g 76 (573)
+||| ++++|++. +..++|++++++.|+++++++..+..++..+..+.||+||+.+++|||+|...++|++++++|
T Consensus 377 ~~Gy~l~~~~~~C~~~-~~~p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g 455 (791)
T 3m0c_C 377 EEGFQLDPHTKACKAV-GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 455 (791)
T ss_dssp CSSEECCSSCCCCEET-TSCCEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred CCCCEeCCCCceeeec-ccccccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccC
Confidence 3677 88999997 478899999999999999999888888889999999999999999999999999999999998
Q ss_pred C----cceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCC
Q psy952 77 T----EKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNL 151 (573)
Q Consensus 77 ~----~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~ 151 (573)
. ..++++..++..|.||||||++++|||+|...++|+|++++|..+++|+ ..+..|++|||||.+|+||||||+.
T Consensus 456 ~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 456 AHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp ------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS
T ss_pred CCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC
Confidence 4 4566777788999999999999999999999999999999999998888 5788899999999999999999987
Q ss_pred cCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-CccceeEEEeeeCC
Q psy952 152 QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVFALTLFED 230 (573)
Q Consensus 152 ~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~~~~~p~~ia~~~~ 230 (573)
.++|+|++|+|+.+++|+ ...+.+|+|||||+.+++|||+|++.++|++++++|..+++|+.. ..+++|++|+++++
T Consensus 536 ~~~I~~~~~dG~~~~~lv--~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~ 613 (791)
T 3m0c_C 536 PAKIKKGGLNGVDIYSLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 613 (791)
T ss_dssp SCEEEEEETTSCCEEEEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred CCeEEEEecCCCceEEEE--eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC
Confidence 789999999999999999 788999999999999999999999999999999999999988864 23889999999999
Q ss_pred eEEEecCCCCceEEEeccCCcceEEEcccCCCceeeeeeecCC---------------Cccccccccccc---Cccceee
Q psy952 231 HIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK---------------GTTRHAWLTAHR---GSTTVAD 292 (573)
Q Consensus 231 ~lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~---------------~~Cs~lCl~~~~---~~~~~~C 292 (573)
+||||||.+++|++++|.+|+.+.+|...+..|++|+|+|+++ ++|+||||+.+. .+..|+|
T Consensus 614 ~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Qp~~~N~C~~~~~~ng~CshlCl~~p~~~~~~~~~~C 693 (791)
T 3m0c_C 614 KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTC 693 (791)
T ss_dssp EEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCCTTTSSSSGGGGCSSEEEECCCCSTTCCSEEE
T ss_pred EEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccCCCCCCcccccCCCCcCcCeeecCCCCcCCCCCCcee
Confidence 9999999999999999999999999988899999999999763 589999999872 1236899
Q ss_pred -eccceeecCCCCC
Q psy952 293 -MIRSVYLGSGNKE 305 (573)
Q Consensus 293 -Cp~~~~l~~d~~~ 305 (573)
||.+|.|..|+++
T Consensus 694 ~Cp~g~~L~~d~~t 707 (791)
T 3m0c_C 694 ACPDGMLLARDMRS 707 (791)
T ss_dssp ECCTTCEECTTSSC
T ss_pred ECCCCCEECCCCCc
Confidence 9999999988775
No 6
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=5e-50 Score=440.81 Aligned_cols=292 Identities=30% Similarity=0.603 Sum_probs=268.6
Q ss_pred CCCceeeCCCCCCEEEEEecccEEEEEcCCCce---eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE
Q psy952 5 DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQY---SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER 81 (573)
Q Consensus 5 dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~---~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 81 (573)
||++|++ ++++||+|++++.|++++++...+ .+++.++.++.+|+||+.+++|||+|...++|+|+.++|+..++
T Consensus 308 d~~~C~~--~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~ 385 (619)
T 3s94_A 308 NGKTCKD--GATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF 385 (619)
T ss_dssp TSSCBCS--SCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cCcccCC--CCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE
Confidence 8999996 468999999999999999987643 34557788999999999999999999999999999999988888
Q ss_pred EEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEec
Q psy952 82 VIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGM 160 (573)
Q Consensus 82 i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~l 160 (573)
++..++..|.||||||.+++|||+|...++|++++++|+.+++|+ ..+..|++|||||.+|+||||||+..++|+|+.|
T Consensus 386 v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~ 465 (619)
T 3s94_A 386 VVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAAL 465 (619)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEcc
Confidence 888888999999999999999999999999999999999988887 5889999999999999999999987789999999
Q ss_pred cCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCC
Q psy952 161 DGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTK 240 (573)
Q Consensus 161 dG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~ 240 (573)
||+.+++++ ...+.+|+|||||+.+++|||+|+..++|++++++|+.+++++... +.+|+||++++++||||||.++
T Consensus 466 dG~~~~~l~--~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~-l~~P~glav~~~~ly~tD~~~~ 542 (619)
T 3s94_A 466 DGSDRVVLV--NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK-IPHIFGFTLLGDYVYWTDWQRR 542 (619)
T ss_dssp TSCSCEEEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECC-CCSSCCEEEETTEEEEECTTSS
T ss_pred CCCccEEEE--eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccC-CCCcEEEEEECCEEEEeecCCC
Confidence 999999999 6789999999999999999999999999999999999999888765 8999999999999999999999
Q ss_pred ceEEEeccCCcceEEEcccCCCceeeeeeecCC-----------CcccccccccccCccceee-eccceeecCCCCC
Q psy952 241 SINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK-----------GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 241 ~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~-----------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
+|++++|.+| ..+++...+..|++|+++|+.. ++|+|+|++.+ ..++| ||.||.|..|+++
T Consensus 543 ~I~~~~k~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~C~~~ng~C~~~C~~~~---~~~~C~C~~g~~l~~d~~~ 615 (619)
T 3s94_A 543 SIERVHKRSA-EREVIIDQLPDLMGLKATNVHRVIGSNPCAEENGGCSHLCLYRP---QGLRCACPIGFELISDMKT 615 (619)
T ss_dssp CEEEEESSSC-CEEEEECSCCCEEEEEEEESSCCCCCCGGGSGGGGCSSEEEEET---TEEEEECCTTCEECSSTTC
T ss_pred eEEEEEcCCC-ceEEEecCCCCCceeeecccccccccccCCCCCCChhHhhccCC---CCeEEECCCCCEECCCCCc
Confidence 9999999999 6677777788999999998752 79999999998 45999 9999999988764
No 7
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=2.9e-49 Score=435.11 Aligned_cols=293 Identities=25% Similarity=0.411 Sum_probs=264.8
Q ss_pred CCCceeeCCCCCCEEEEEecccEEEEEcCCCc---eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE
Q psy952 5 DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQ---YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER 81 (573)
Q Consensus 5 dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~---~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 81 (573)
|+++|++ +.+||+|++++.|+++.+++.. ..+++.++.++.+|+||+.+++|||+|...++|+|+.++|+..++
T Consensus 300 d~~~C~~---~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~ 376 (628)
T 4a0p_A 300 DNRTCSA---PTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFT 376 (628)
T ss_dssp TSSCEEC---CSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred cCCcCcc---ccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceE
Confidence 8999996 5689999999999999998653 345667889999999999999999999999999999999988776
Q ss_pred EEcC------CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcC-
Q psy952 82 VIRH------DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQA- 153 (573)
Q Consensus 82 i~~~------~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~- 153 (573)
++.. ++..|.||||||++++|||+|...++|++++++|+.+++|+ ..+..|++|||||.+|+||||||+..+
T Consensus 377 v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~ 456 (628)
T 4a0p_A 377 VVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSP 456 (628)
T ss_dssp EEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEE
T ss_pred EEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCC
Confidence 6654 56799999999999999999999999999999999988887 478899999999999999999998765
Q ss_pred eEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEE
Q psy952 154 YIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIY 233 (573)
Q Consensus 154 ~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~ly 233 (573)
+|+|++|||+.+++|+ .+.+.+|+|||||+.+++|||+|+..++|++++++|+.++++.... +.+|+||++++++||
T Consensus 457 ~I~r~~~dG~~~~~l~--~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~-~~~P~glav~~~~ly 533 (628)
T 4a0p_A 457 KIERAALDGTEREVLF--FSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSN-ILQPVGLTVFENWLY 533 (628)
T ss_dssp EEEEEETTSCSCEEEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSCEEEEEEETTEEE
T ss_pred eEEEEeCCCCCcEEEE--eccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCC-CCCcEEEEEECCEEE
Confidence 8999999999999999 6789999999999999999999999999999999999999988755 889999999999999
Q ss_pred EecCCCCceEEEeccCCcceEEEcccCCCceeeeeeecCC-------------CcccccccccccCccceee-eccceee
Q psy952 234 WTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK-------------GTTRHAWLTAHRGSTTVAD-MIRSVYL 299 (573)
Q Consensus 234 wtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~-------------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l 299 (573)
||||.+++|++++|.+|+..++|...+..|++|+++|+.. ++|+|+|++.+. ..++| ||.+|.|
T Consensus 534 ~tD~~~~~i~~~~k~~G~~~~~i~~~~~~~~~i~~~~~~~~~~~~~n~c~~~ng~C~~~C~~~~~--~~~~C~C~~g~~l 611 (628)
T 4a0p_A 534 WIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGD--GTTRCSCPMHLVL 611 (628)
T ss_dssp EEETTTTEEEEEETTSSSCCEEEECCCTTEEEEEEECCCCHHHHHHSTTTTGGGGCSSEEEECTT--SCEEEECCTTEEE
T ss_pred EEECCCCeEEEEECcCCCCcEEEeccCCCCcceEEEeecccCccccccCCCCCCCcchhcccCCC--CCeeeeCCCCCEE
Confidence 9999999999999999999999988888899999887531 899999999872 35799 9999999
Q ss_pred cCCCCC
Q psy952 300 GSGNKE 305 (573)
Q Consensus 300 ~~d~~~ 305 (573)
.+|+++
T Consensus 612 ~~d~~~ 617 (628)
T 4a0p_A 612 LQDELS 617 (628)
T ss_dssp CTTSSC
T ss_pred CCCCCc
Confidence 988775
No 8
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=8e-48 Score=390.85 Aligned_cols=288 Identities=32% Similarity=0.639 Sum_probs=256.8
Q ss_pred CCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC----CcceEEEcCCCCCcc
Q psy952 16 KPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS----TEKERVIRHDSHGLE 91 (573)
Q Consensus 16 ~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~i~~~~~~~p~ 91 (573)
+|||||++++.|+++++++..+..++..+.+|.||+||+.+++|||+|...++|++++++| +..+.++..++..|.
T Consensus 1 ~~~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp CCEEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred CCEEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 4799999999999999999888777888999999999999999999999999999999998 555666766788999
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc-CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT-AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
|||+||.+++|||+|...++|.+++++|..+++++. .+..|++|||||..|+|||++++..++|+|+++||+.+++++
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~- 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV- 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE-
Confidence 999999999999999999999999999998888774 788999999999999999999875589999999999999888
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-CccceeEEEeeeCCeEEEecCCCCceEEEeccC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVFALTLFEDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~ 249 (573)
...+.+|+||++|+.+++|||+|+..++|++++++|+.+++++.. ..+.+|+||++++++|||+||.+++|.++++.+
T Consensus 160 -~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 160 -TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp -CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred -ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCC
Confidence 678999999999999999999999999999999999999888763 237899999999999999999999999999999
Q ss_pred CcceEEEcccCCCceeeeeeecCC---------------Cccccccccccc---Cccceee-eccceeecCCCCC
Q psy952 250 GRDYRVLRNTTHRPYDIHVYHPLK---------------GTTRHAWLTAHR---GSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 250 g~~~~~l~~~~~~p~~i~v~~~~~---------------~~Cs~lCl~~~~---~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
|+..+++...+..|++|+|+|+.+ ++|+|+|++.+. ....++| ||.+|.|..|+++
T Consensus 239 g~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~ 313 (316)
T 1ijq_A 239 GSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRS 313 (316)
T ss_dssp CCCCEEEECSCSCCCCEEEESGGGSCCCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSC
T ss_pred CcceEEEecCCCCceEEEEeccccCCcccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCc
Confidence 999988888788999999998642 379999998862 1246899 9999999988774
No 9
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=4.1e-48 Score=425.95 Aligned_cols=285 Identities=31% Similarity=0.639 Sum_probs=262.3
Q ss_pred CCCCEEEEEecccEEEEEcCCCcee--ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 14 SIKPWLIFSNKYYVRNMSLDATQYS--LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 14 ~~~~~l~~s~~~~I~~i~l~g~~~~--~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
.+++||+|++++.|++++|++.... +++.++.+|.||+||+.+++|||+|...++|+|++++|+..++++..++..|.
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE 83 (628)
T ss_dssp -CCCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred CCCcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence 5789999999999999999987643 34567889999999999999999999999999999999988888888888999
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
||||||.+++|||+|...++|++++++|..+++|+ ..+..|++|||||.+|+||||||+..++|+|++|||+.+++++
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~- 162 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV- 162 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-
Confidence 99999999999999999999999999999988887 6888999999999999999999987889999999999999998
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g 250 (573)
+.+.+|+||+||+.+++|||+|...++|++++++|..++++... +.+|+||++++++||||||.+++|.+++|.+|
T Consensus 163 --~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~--l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 163 --PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADD--LPHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp --CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC--CSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred --CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeecc--CCCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 58999999999999999999999999999999999999766554 78999999999999999999999999999999
Q ss_pred cceEEEcccCCCceeeeeeecCC-----------CcccccccccccCccceee-eccceeecCCCCC
Q psy952 251 RDYRVLRNTTHRPYDIHVYHPLK-----------GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 251 ~~~~~l~~~~~~p~~i~v~~~~~-----------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
+.+++|...+..|++|+|+|+.+ ++|+|+|++.+ ..+|+| ||.+|.|..|+++
T Consensus 239 ~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~--~~~~~C~C~~g~~l~~d~~~ 303 (628)
T 4a0p_A 239 QNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVP--VGGFVCGCPAHYSLNADNRT 303 (628)
T ss_dssp CSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEET--TTEEEEECSTTCEECTTSSC
T ss_pred CceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCC--CCCeeEEcCCCcEecccCCc
Confidence 99999988888999999999853 78999999987 246999 9999999888765
No 10
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=1e-47 Score=422.56 Aligned_cols=287 Identities=36% Similarity=0.688 Sum_probs=248.4
Q ss_pred CCCEEEEEecccEEEEEcCCC--ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc-ceEEEcCCCCCcc
Q psy952 15 IKPWLIFSNKYYVRNMSLDAT--QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE-KERVIRHDSHGLE 91 (573)
Q Consensus 15 ~~~~l~~s~~~~I~~i~l~g~--~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~i~~~~~~~p~ 91 (573)
..|+|++++++.|+++++++. ++++++.++.+|.||+||+.+++|||+|...++|+|+.++|+. .++++..++..|.
T Consensus 8 ~~~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 8 HAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 87 (619)
T ss_dssp --CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE
T ss_pred cCceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC
Confidence 468999999999999999976 4677888999999999999999999999999999999999875 4667888889999
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
||||||.+++|||+|...++|++++++|..+++|+ ..+..|++|||||.+|+||||||+..++|+|+.|||+.+++++
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~- 166 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII- 166 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-
Confidence 99999999999999999999999999999988888 6889999999999999999999987889999999999999999
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g 250 (573)
...+.+|+|||||+.+++|||+|...++|++++++|..+++++.+. +.+|+||++++++||||||.+++|.+++|.+|
T Consensus 167 -~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 167 -NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp -CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred -eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC-CCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence 6789999999999999999999999999999999999998888755 88999999999999999999999999999999
Q ss_pred cceEEEcccCCCceeeeeeecCC------------CcccccccccccCccceee-eccceeecCCCCC
Q psy952 251 RDYRVLRNTTHRPYDIHVYHPLK------------GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 251 ~~~~~l~~~~~~p~~i~v~~~~~------------~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
+..+++...+..|++|+|+|+.+ ++|+|+|++.+ ....++| ||.||.+..|+++
T Consensus 245 ~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~-~~~~~~C~C~~g~~l~~d~~~ 311 (619)
T 3s94_A 245 EGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSP-VKPFYQCACPTGVKLLENGKT 311 (619)
T ss_dssp CCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECS-STTSEEEECCTTCCBCTTSSC
T ss_pred cccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCC-CCCCceEeCCchheecccCcc
Confidence 99998888888999999999852 78999999988 3346999 9999999888765
No 11
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=3.9e-46 Score=416.14 Aligned_cols=302 Identities=31% Similarity=0.632 Sum_probs=266.7
Q ss_pred CCCC----CCCceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC
Q psy952 1 MPGW----DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS 76 (573)
Q Consensus 1 ~~g~----dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g 76 (573)
.||| ++++|++. +..++||+++++.|+++++++..+..++..+.+|.+|+||+.+++|||+|...++|+++++++
T Consensus 359 ~~G~~~~~~~~~C~~~-~~~~~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g 437 (699)
T 1n7d_A 359 EEGFQLDPHTKACKAV-GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 437 (699)
T ss_dssp CSSCBCCSSCCCCBCC-SSCCCBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCC
T ss_pred ecccccCCCCCccccc-ccceeEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCC
Confidence 3676 68999987 578999999999999999999888888888899999999999999999999999999999987
Q ss_pred ----CcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc-CCCCcceEEEeCCCceEEEEecCC
Q psy952 77 ----TEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT-AIQDPRGITLHPGIGYVYFSSWNL 151 (573)
Q Consensus 77 ----~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~ 151 (573)
+....++..++..|.||||||.+++|||+|...++|.+++++|..+++++. .+..|++|||||..|+||||+++.
T Consensus 438 ~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 438 AHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp CCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS
T ss_pred CCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC
Confidence 455555656778999999999999999999999999999999999888874 678899999999999999999876
Q ss_pred cCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-CccceeEEEeeeCC
Q psy952 152 QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVFALTLFED 230 (573)
Q Consensus 152 ~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~~~~~p~~ia~~~~ 230 (573)
.++|+|++|+|+.+++++ ...+.+|+|||||+.+++|||+|+..++|++++++|..+++++.. ..+.+|+||+++++
T Consensus 518 ~~~I~~~~~dG~~~~~l~--~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 518 PAKIKKGGLNGVDIYSLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 595 (699)
T ss_dssp SCCEEBCCSSSCCCCEES--CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT
T ss_pred CCeEEEEeCCCCCeeEEE--eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC
Confidence 689999999999988887 678999999999999999999999999999999999999888753 23789999999999
Q ss_pred eEEEecCCCCceEEEeccCCcceEEEcccCCCceeeeeeecCC---------------Cccccccccccc---Cccceee
Q psy952 231 HIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLK---------------GTTRHAWLTAHR---GSTTVAD 292 (573)
Q Consensus 231 ~lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~~~---------------~~Cs~lCl~~~~---~~~~~~C 292 (573)
+|||+||.+++|.++++.+|+.+++|...+..|++|+|+|+.+ ++|+||||++|. ....|+|
T Consensus 596 ~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~lCl~~p~~~~~~~~~~C 675 (699)
T 1n7d_A 596 KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTC 675 (699)
T ss_dssp EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSCCSCCSSCSSSCSSCSCTTCCBCCCCCTTCSCSCBC
T ss_pred EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCCCCCCCccccCCCCCCCCcccCcCcccCCCCCCcEE
Confidence 9999999999999999999999888877788999999998753 479999998762 2346899
Q ss_pred -eccceeecCCCCC
Q psy952 293 -MIRSVYLGSGNKE 305 (573)
Q Consensus 293 -Cp~~~~l~~d~~~ 305 (573)
||.+|.|..|+++
T Consensus 676 ~Cp~g~~l~~d~~~ 689 (699)
T 1n7d_A 676 ACPDGMLLARDMRS 689 (699)
T ss_dssp CCCSSCEECSSTTC
T ss_pred ECcCCCEECCCCCc
Confidence 9999999988765
No 12
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1.1e-37 Score=348.01 Aligned_cols=231 Identities=37% Similarity=0.799 Sum_probs=157.4
Q ss_pred CcccCCccccCCCeeeecceeeCCcCCCCCCCCCCC-CCCCccccCCCCCccCCccccCCCCccccCCCCceecCC-Ccc
Q psy952 307 STCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPL-HCNVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLED-GKA 384 (573)
Q Consensus 307 ~~C~~~~~~C~~g~Ci~~~~~cd~~~~c~d~sde~~-~c~~~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~~-~~c 384 (573)
..|.+.+|+|.+|+||+..|+|||..||.|+|||.. .|....|.. .+|+|.++ ++|
T Consensus 4 ~~C~~~~f~C~~g~ci~~~~~Cdg~~dC~d~sDE~~~~C~~~~C~~----------------------~~f~C~~~~~~C 61 (699)
T 1n7d_A 4 DRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKS----------------------GDFSCGGRVNRC 61 (699)
T ss_dssp ----------------------------------------CCSCSS----------------------SSCCCCC--CCC
T ss_pred CCCCccceeCCCCcEEcHHhcCCCcccCCCCCCCCccccCCcCCCC----------------------CccCCCCCCCce
Confidence 468889999999999999999999999999999972 254433433 56777664 479
Q ss_pred cccccccCCCCC-CCCCCCCCCCCCCCCCCCceecCCCcccCCCcccCCCCCCCCCCCCCCCccCCcCCCCCCcCCCCCC
Q psy952 385 CTDIDECIEQPG-VCSQYPAMCHNRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKT 463 (573)
Q Consensus 385 ~~~~~~C~~~~~-~~~~~~~~C~~~~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~~~C~~~~C~~~~~~C~~~~ 463 (573)
|+..|.||+..| ...+||..|....|.+. +|+|.+|+||+..|+||+..||.|+|||.. |....|.+++|+|.
T Consensus 62 i~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~-~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~--C~~~~C~~~~f~C~--- 135 (699)
T 1n7d_A 62 IPQFWRCDGQVDCDNGSDEQGCPPKTCSQD-EFRCHDGKCISRQFVCDSDRDCLDGSDEAS--CPVLTCGPASFQCN--- 135 (699)
T ss_dssp CCSSSTTSSSCCC-CCCTTTSCSSCCCCSS-CCCSSCC----CCCTTCSSCCSSSSCSSSS--CCCCCCCSSCCCCS---
T ss_pred eCcceecCCcccCCCCcccCcccccccccC-cEEcCCCCEecHHHcCCCcCcCCCCCccCC--cCccccCccccCCC---
Confidence 999999999999 55566788998889988 999999999999999999999999999987 88888999999997
Q ss_pred CccccCCccccCCCCCCCCCCCCCCCCCC----------CCC------------CC-CccCCCCCCCCCCCCcccccCCC
Q psy952 464 NYRCIPKWLFCDGKDDCRDGSDELPQNCP----------LES------------LG-SVCNGVNDCKDNITSDETHARCP 520 (573)
Q Consensus 464 ~~~c~~~~~~Cdg~~dC~d~sDe~~~~C~----------~c~------------~~-~~Cd~~~dC~dg~~~de~~~~C~ 520 (573)
+++|||..|+|||..||.|||||.+.+|. .|. +. .+|||..||.|| |||.+ |
T Consensus 136 ~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dg--sDE~~--C- 210 (699)
T 1n7d_A 136 SSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDK--SDEEN--C- 210 (699)
T ss_dssp SSCCCCTTSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCSCSSSCCCSSSCCCSTTCTTSSSCCSTTS--CSSCS--C-
T ss_pred CCcccchhcccCCCCcCCCCcccccccCCCcccccCCCCCCCCcceecCCCceEechhccCCCCCCCCC--ccccc--C-
Confidence 68999999999999999999999555552 232 22 289999999999 99998 9
Q ss_pred CCCCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCCC-CCC-CCCCCC
Q psy952 521 SNITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ-RTC-PQNSFR 573 (573)
Q Consensus 521 ~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~-~~c-~~~~f~ 573 (573)
....|.+++|+|.++ .||+.+|+|||..||.|+|||. +|.. ..| .+.+|+
T Consensus 211 ~~~~C~~~~f~C~~g-~Ci~~~~~Cdg~~dC~dgsde~--~C~~~~~C~~~~~~~ 262 (699)
T 1n7d_A 211 AVATCRPDEFQCSDG-NCIHGSRQCDREYDCKDMSDEV--GCVNVTLCEGPNKFK 262 (699)
T ss_dssp CCCCCCSSEEESSSS-CEEETTCCSSSCCCSSSSCSSS--STTCCCCCCSTTCCC
T ss_pred CCcccCCCcEecCCC-ceeeeecccCCCCCCCCCCccC--CCCCCCcccCCCcee
Confidence 456899999999998 9999999999999999999998 8864 346 345553
No 13
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=100.00 E-value=1e-33 Score=279.66 Aligned_cols=251 Identities=27% Similarity=0.550 Sum_probs=219.1
Q ss_pred CEEEEEecccEEEEEcCCCcee------ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFSNKYYVRNMSLDATQYS------LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~~~~I~~i~l~g~~~~------~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
++|+|++.+.|+++++++.... ++......|.+|++|+.+++|||+|...++|++++++|.....++..++..|
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 6899999999999999987542 2222356789999999999999999999999999999987777776677899
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCC-cCeEEEEeccCCCcEEE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNL-QAYIGKIGMDGSNFTRI 168 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~-~~~I~r~~ldG~~~~~l 168 (573)
.+|++|+.+++|||+|...++|.+++++|...++++ ..+..|++|++||..++|||++++. ..+|+++.++|...+++
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 999999999999999999999999999998877766 4668899999999999999999763 57999999999988888
Q ss_pred EecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEecc
Q psy952 169 LTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKF 248 (573)
Q Consensus 169 ~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~ 248 (573)
. ...+..|+||++|+.+++|||+|...++|.+++++|..++.++.. +.+|.+|++++++|||+++.+++|.++++.
T Consensus 162 ~--~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 162 A--QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp E--CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC--CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred E--ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC--CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 7 567889999999998999999999999999999999887777664 679999999999999999999999999988
Q ss_pred CCcceEEEccc-CCCceeeeeeec
Q psy952 249 NGRDYRVLRNT-THRPYDIHVYHP 271 (573)
Q Consensus 249 ~g~~~~~l~~~-~~~p~~i~v~~~ 271 (573)
+|+....+..+ ...|++|++..+
T Consensus 238 ~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 238 ISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp TTEEEEEECCSSCCCCCCEEEECS
T ss_pred CCCceEEEccccccccceeeecCc
Confidence 89888777654 347999988664
No 14
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=340.07 Aligned_cols=250 Identities=34% Similarity=0.718 Sum_probs=36.2
Q ss_pred CCcccCCccccCCCeeeecceeeCCcCCCCCCCCCCC-CCCCccccCCCCCccCC----------------ccccCCCCc
Q psy952 306 NSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPL-HCNVDECAKVETNQCGH----------------KCVDTLTGY 368 (573)
Q Consensus 306 ~~~C~~~~~~C~~g~Ci~~~~~cd~~~~c~d~sde~~-~c~~~~C~~~~~~~C~~----------------~C~~~~~~~ 368 (573)
...|..++|+|.+|+||+..|+|||..||.|+|||.. .|....|.. .+|+|.+ .|.++++|.
T Consensus 21 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~D~sDE~~~~C~~~~C~~-~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~ 99 (791)
T 3m0c_C 21 GDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKS-GDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQ 99 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCcCcCccCCCCCCEEehhhcCCCCccCCCCCcccccccccCccCc-CccccCCCCCCEeeccccCCCCcCcCCCcccC
Confidence 5679999999999999999999999999999999972 365555655 5555543 468899999
Q ss_pred ccc---CC-CCceecCCCcccccccccCCCCC-CCCCCCCCCCCCCCCCCCceecCCCcccCCCcccCCCCCCCCCCCCC
Q psy952 369 YCE---CN-TGYKLLEDGKACTDIDECIEQPG-VCSQYPAMCHNRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEP 443 (573)
Q Consensus 369 ~C~---C~-~~f~c~~~~~c~~~~~~C~~~~~-~~~~~~~~C~~~~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~ 443 (573)
.|. |. .+|+|.++ +||+..|.||+..| ...+||..|....|.+. +|+|.+|.|||..|+||+..||.|+|||.
T Consensus 100 ~C~~~~C~~~~f~C~~g-~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~-~f~C~~~~Ci~~~~~Cdg~~dC~dgsDE~ 177 (791)
T 3m0c_C 100 GCPPKTCSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEASCPVLTCGPA-SFQCNSSTCIPQLWACDNDPDCEDGSDEW 177 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCccccCCeEECCCC-CEECHHHcCCCcccCCCCcccccccccccccc-eeccCCCccccccccCCCCCcCCCCCCcc
Confidence 995 87 79999876 59999999999999 55566788998899998 99999999999999999999999999997
Q ss_pred CCccC--------CcCCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCCCCCC--CCCC------------C-Ccc
Q psy952 444 AYMCR--------QRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCP--LESL------------G-SVC 500 (573)
Q Consensus 444 ~~~C~--------~~~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~~~C~--~c~~------------~-~~C 500 (573)
...|. ...|...+|+|. +++||+..|+|||..||.|+||| .+|. .|.+ . .+|
T Consensus 178 ~~~C~~~~~~~~~~~~C~~~~f~C~---~g~Ci~~~~~CDg~~dC~dgsDE--~~C~~~~C~~~~f~C~~g~Ci~~~~~C 252 (791)
T 3m0c_C 178 PQRCRGLYVFQGDSSPCSAFEFHCL---SGECIHSSWRCDGGPDCKDKSDE--ENCAVATCRPDEFQCSDGNCIHGSRQC 252 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCccccCCCCCCCCCCccccc---CCceeccccccCCCCCCCCCCCC--CCccccccCCCcceecCCceEecceec
Confidence 54573 346888999998 68999999999999999999999 6663 3332 2 289
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCcC-CCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCCCCCCC
Q psy952 501 NGVNDCKDNITSDETHARCPSNITCP-PHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQRTCP 568 (573)
Q Consensus 501 d~~~dC~dg~~~de~~~~C~~~~~C~-~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~~~c~ 568 (573)
|+..||.|+ +||.+ |.....|. +.+|.|.+| .||+..++||+..||.|||||....|....|.
T Consensus 253 dg~~dC~dg--sDE~~--C~~~~~C~~~~~~~C~~G-~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~ 316 (791)
T 3m0c_C 253 DREYDCKDM--SDEVG--CVNVTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDEPIKECGTNECL 316 (791)
T ss_dssp ------------------------CCSTTCCCCTTS-CCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTT
T ss_pred CChhccccc--cccCc--ccccccccCCCccccCCC-cccccccccCCccccccccCcccccccccccc
Confidence 999999999 99998 86556674 789999998 99999999999999999999974346555554
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.96 E-value=8.9e-28 Score=250.03 Aligned_cols=207 Identities=20% Similarity=0.367 Sum_probs=180.9
Q ss_pred CCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcce
Q psy952 56 ENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRG 134 (573)
Q Consensus 56 ~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~ 134 (573)
...|++++. ..|+++++++...+.++ .++..|.||++|+..++|||+|...++|.+++++|...++++ .++..|.|
T Consensus 87 ~~~l~~~~~--~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g 163 (386)
T 3v65_B 87 EPVLLFANR--IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG 163 (386)
T ss_dssp CCEEEEECB--SCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCC
T ss_pred cceeEeecC--ccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccE
Confidence 667888764 57999999987776555 467899999999999999999999999999999998876665 57889999
Q ss_pred EEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCC-CeEEEEeCCCCcEEEE
Q psy952 135 ITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL-DYIASVDLDGKHKHIV 213 (573)
Q Consensus 135 Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~-~~I~~~~~dG~~~~~l 213 (573)
||||+..+.|||+|++ ..+|++++++|..+++++ ...+..|+||++|+.+++|||+|+.. ++|++++++|+.++++
T Consensus 164 lavd~~~g~lY~~d~~-~~~I~~~~~dg~~~~~l~--~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSG-TSRIEVANLDGAHRKVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp EEEETTTTEEEEEETT-TTEEEECBTTSCSCEEEE--CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred EEEEeCCCeEEEEcCC-CCeEEEEeCCCCceEEee--cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 9999999999999975 579999999999999988 68899999999999999999999998 9999999999999888
Q ss_pred EeCCccceeEEEeee--CCeEEEecCCCCceEEEeccCCcceEE-EcccCCCceeeeeee
Q psy952 214 ISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNGRDYRV-LRNTTHRPYDIHVYH 270 (573)
Q Consensus 214 ~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~g~~~~~-l~~~~~~p~~i~v~~ 270 (573)
+... +..|.||++. +++|||+|+.+++|++++ .+|..+++ +...+..|++|+++.
T Consensus 241 ~~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d-~dG~~~~~~~~~~~~~P~giav~~ 298 (386)
T 3v65_B 241 ADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERAN-LDGSHRKAVISQGLPHPFAITVFE 298 (386)
T ss_dssp ECSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEEC-TTSCSCEEEECSSCSSEEEEEEET
T ss_pred EECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEEe-CCCCeeEEEEECCCCCceEEEEEC
Confidence 8755 7899999995 789999999999999998 46666554 455678999999854
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.96 E-value=4.7e-28 Score=248.66 Aligned_cols=208 Identities=17% Similarity=0.369 Sum_probs=185.3
Q ss_pred CCCEEEEEe--cccEEEEEcCCCceee-cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 15 IKPWLIFSN--KYYVRNMSLDATQYSL-VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 15 ~~~~l~~s~--~~~I~~i~l~g~~~~~-~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
....|++++ .+.|++++++|..... +..++..|.||++|+.+++|||+|...++|++++++|...++++..++..|.
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~ 162 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPR 162 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEE
T ss_pred cccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcc
Confidence 456788887 5789999999876544 4456788999999999999999999999999999999888888877889999
Q ss_pred eeEEeecCCcEEEEeCCC-CeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE
Q psy952 92 GLAVDWVGRKLYWLDRHS-KQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 92 glavD~~~~~LY~td~~~-~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~ 169 (573)
+||+|+.++.|||+|... ++|++++++|..+++++ ..+..|+||||||..++|||+|++ ..+|++++++|+.+++++
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~-~~~I~~~~~dG~~~~~~~ 241 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVI 241 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEE
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECC-CCEEEEEeCCCCceEEEE
Confidence 999999999999999987 99999999999988877 478889999999999999999975 679999999999999888
Q ss_pred ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEe-CCCCcEEEEEeCCccceeEEEeeeC
Q psy952 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVD-LDGKHKHIVISGQKVPHVFALTLFE 229 (573)
Q Consensus 170 ~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~-~dG~~~~~l~~~~~~~~p~~ia~~~ 229 (573)
...+.+|.||+++ +++|||+|+..++|.+++ .+|..+++|... +..|++|+++.
T Consensus 242 --~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~--~~~p~gi~v~~ 296 (349)
T 3v64_C 242 --SQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNK--LHFPMDIHTLH 296 (349)
T ss_dssp --CSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECS--CSCCCCEEEEC
T ss_pred --eCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEEeccC--CCCCceEEEEc
Confidence 6779999999995 789999999999999999 789988888765 68999999865
No 17
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.96 E-value=8.4e-28 Score=243.20 Aligned_cols=208 Identities=20% Similarity=0.354 Sum_probs=183.3
Q ss_pred CCEEEEEe--cccEEEEEcCCCc--eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQ--YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~--~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
+..|++++ .+.|+++++++.. ..++..++..|.||++|+.++.|||+|...++|.+++++|...++++...+..|.
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~ 125 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPR 125 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCcc
Confidence 35778886 4689999998874 2445567788999999999999999999999999999999888888877889999
Q ss_pred eeEEeecCCcEEEEeCC-CCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE
Q psy952 92 GLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 92 glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~ 169 (573)
|||+|+.+++|||+|.. .++|++++++|+.+++++ ..+..|+|||||+..+.|||+|+. ..+|++++++|+.+++++
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK-LNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEE
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC-CCEEEEEcCCCCceEEEe
Confidence 99999999999999975 689999999999988877 578899999999999999999965 679999999999999998
Q ss_pred ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeC-CCCcEEEEEeCCccceeEEEeeeCC
Q psy952 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDL-DGKHKHIVISGQKVPHVFALTLFED 230 (573)
Q Consensus 170 ~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~-dG~~~~~l~~~~~~~~p~~ia~~~~ 230 (573)
...+..|.||+++ ++.|||+|+..++|.++++ +|..+++|... +.+|++|+++..
T Consensus 205 --~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~--~~~P~~i~v~~~ 260 (318)
T 3sov_A 205 --KGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREIHSD--IFSPMDIHAFSQ 260 (318)
T ss_dssp --CSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECC--CSSCCCEEEECG
T ss_pred --cCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEEeCC--CCCCcEEEEecc
Confidence 6689999999998 7899999999999999998 68887777655 679999998753
No 18
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.96 E-value=2e-27 Score=248.49 Aligned_cols=211 Identities=21% Similarity=0.388 Sum_probs=181.1
Q ss_pred CCCEEEEEe--cccEEEEEcCCC----ce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC
Q psy952 15 IKPWLIFSN--KYYVRNMSLDAT----QY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS 87 (573)
Q Consensus 15 ~~~~l~~s~--~~~I~~i~l~g~----~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~ 87 (573)
....|++++ .+.|+++++++. .. .++...+..|.||++|+.++.|||+|...++|.+++++|....+++..++
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~ 201 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG 201 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSS
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCC
Confidence 356788886 478999999873 23 34444788899999999999999999999999999999998888888888
Q ss_pred CCcceeEEeecCCcEEEEeCC-CCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCc
Q psy952 88 HGLEGLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF 165 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~ 165 (573)
..|.+||||+.+++|||||.. .++|++++++|..+++++ ..+..|+|||||+.+++|||+|+. ..+|++++++|..+
T Consensus 202 ~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~-~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 202 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNR 280 (400)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCCC
T ss_pred CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC-CCEEEEEeCCCCcc
Confidence 999999999999999999976 489999999999988887 578899999999999999999965 67999999999999
Q ss_pred EEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEe-CCCCcEEEEEeCCccceeEEEeeeCC
Q psy952 166 TRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVD-LDGKHKHIVISGQKVPHVFALTLFED 230 (573)
Q Consensus 166 ~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~-~dG~~~~~l~~~~~~~~p~~ia~~~~ 230 (573)
++++.....+..|.||+++ +++|||+|+..++|.+++ .+|..+++|... +.+|++|+++..
T Consensus 281 ~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~--~~~p~~i~v~~~ 342 (400)
T 3p5b_L 281 KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAEN--LLSPEDMVLFHN 342 (400)
T ss_dssp EEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECS--CSCEEEEEEESG
T ss_pred EEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecC--CCCCceEEEEee
Confidence 9988423457889999996 889999999999999999 788888888755 689999998754
No 19
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.95 E-value=1.8e-26 Score=233.59 Aligned_cols=210 Identities=21% Similarity=0.375 Sum_probs=178.0
Q ss_pred CCEEEEEe--cccEEEEEcCC----Cceeecc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCC
Q psy952 16 KPWLIFSN--KYYVRNMSLDA----TQYSLVH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSH 88 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g----~~~~~~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~ 88 (573)
...|++++ .+.|+++++++ .....++ ..+..|.+|++|+.++.|||+|...++|.+++++|....+++...+.
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 120 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS 120 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC
Confidence 45788887 47899999987 4333333 46678999999999999999999999999999999887777777788
Q ss_pred CcceeEEeecCCcEEEEeCCC-CeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE
Q psy952 89 GLEGLAVDWVGRKLYWLDRHS-KQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT 166 (573)
Q Consensus 89 ~p~glavD~~~~~LY~td~~~-~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~ 166 (573)
.|.+||+|+.+++|||+|... ++|++++++|+.+++++ ..+..|+|||+|+..++|||+|.. ..+|++++++|+.++
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRK 199 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECC-CCeEEEEecCCCceE
Confidence 999999999999999999875 89999999999988876 478889999999999999999965 679999999999999
Q ss_pred EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeC-CCCcEEEEEeCCccceeEEEeeeCC
Q psy952 167 RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDL-DGKHKHIVISGQKVPHVFALTLFED 230 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~-dG~~~~~l~~~~~~~~p~~ia~~~~ 230 (573)
+++.....+..|.||+++ +++|||+|+..++|.+++. +|...+++..+ +..|.+|+++..
T Consensus 200 ~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~--~~~p~~i~v~~~ 260 (316)
T 1ijq_A 200 TILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAEN--LLSPEDMVLFHN 260 (316)
T ss_dssp EEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEECS--CSCCCCEEEESG
T ss_pred EEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEEEecC--CCCceEEEEecc
Confidence 887422457899999997 6999999999999999997 78888777665 678999998753
No 20
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.94 E-value=1.6e-25 Score=224.05 Aligned_cols=210 Identities=14% Similarity=0.191 Sum_probs=174.9
Q ss_pred cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEE---CCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCC
Q psy952 24 KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFAD---VAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGR 100 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d---~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~ 100 (573)
++.|++++++|.+.+++...... ++.+.+++|||++ .....|++++++|+..+.|..... ++++|.++
T Consensus 87 ~~~Iy~i~~dg~~~~~l~~~~~~----~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~ 157 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVLDPDPCI----YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FTCNTSDR 157 (302)
T ss_dssp SEEEEEEETTSCCCEEEECSCEE----EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CCSEEETT
T ss_pred CCeEEEEeCCCCcceEeecCCcc----EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eEeeEECC
Confidence 35799999999988777655432 4555699999999 567799999999999888776542 67899999
Q ss_pred cEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCce
Q psy952 101 KLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNA 180 (573)
Q Consensus 101 ~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~g 180 (573)
+|||++....+|++++++|..+++|..+ +..++++|..++|||++|....+|+|++|||+.+++|+ .+.+ |
T Consensus 158 ~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt--~~~~--~-- 228 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT--EANI--E-- 228 (302)
T ss_dssp EEEEECTTTCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECS--CSCE--E--
T ss_pred EEEEEeCCCceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe--CCCc--c--
Confidence 9999998888999999999998877543 45567889999999999976689999999999998887 4544 3
Q ss_pred EEEeccCCeEEEE-eCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 181 LTLDYFTERLYWA-DAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 181 laiD~~~~~LYw~-D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
.+++.+++|||+ +.....|+++++||+.+++|..+. ..+|++++++|||+||.+++|++++ .+|+++.+|.
T Consensus 229 -~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~----~~~i~i~~d~Iy~td~~~~~i~~~~-~dGs~~~~l~ 300 (302)
T 3s25_A 229 -HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGE----FCNINVTSQYVYFTDFVSNKEYCTS-TQNPDTIKAL 300 (302)
T ss_dssp -EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESC----EEEEEECSSEEEEEETTTCCEEEEE-SSSCCSCEEC
T ss_pred -eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCc----cceEEEeCCEEEEEECCCCeEEEEE-CCCCCceEec
Confidence 377779999997 666789999999999999888753 4589999999999999999999985 7888776664
No 21
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.93 E-value=4.5e-24 Score=210.41 Aligned_cols=206 Identities=20% Similarity=0.353 Sum_probs=172.1
Q ss_pred CEEEEEECCCCeEEEEEcCCCcce-----EEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCC
Q psy952 57 NRFYFADVAAKTIYRSRVGSTEKE-----RVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQ 130 (573)
Q Consensus 57 ~~ly~~d~~~~~I~~~~~~g~~~~-----~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~ 130 (573)
..|||++. +.|++++++|.... .++......|.+|++|+.+++|||+|...++|.+++++|...+.++ ..+.
T Consensus 2 ~~l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred cEEEEEcC--CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 46899884 48999999986532 3444345689999999999999999999999999999998776665 4678
Q ss_pred CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCC--CCeEEEEeCCCC
Q psy952 131 DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAH--LDYIASVDLDGK 208 (573)
Q Consensus 131 ~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~--~~~I~~~~~dG~ 208 (573)
.|.+|++|+.+++|||++.. ..+|.+++++|...++++ ...+..|++|++|+.+++|||++.. .++|++++++|.
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~-~~~I~~~~~~g~~~~~~~--~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQ-LDRIEVAKMDGTQRRVLF--DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEE--CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CccEEEEEecCCeEEEEECC-CCEEEEEEcCCCCEEEEE--ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 89999999989999999965 678999999999888887 5677899999999989999999987 679999999999
Q ss_pred cEEEEEeCCccceeEEEeee--CCeEEEecCCCCceEEEeccCCcceEEEcccCCCceeeeee
Q psy952 209 HKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVY 269 (573)
Q Consensus 209 ~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~ 269 (573)
.++++.... +..|.+|++. +++|||+|+..++|.+++. +|..+..+......|.+|++.
T Consensus 157 ~~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~-~g~~~~~~~~~~~~P~gi~~d 217 (267)
T 1npe_A 157 NRRILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNP-AQPGRRKVLEGLQYPFAVTSY 217 (267)
T ss_dssp CCEEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEET-TEEEEEEEEECCCSEEEEEEE
T ss_pred CcEEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEec-CCCceEEEecCCCCceEEEEe
Confidence 888777544 6789999996 5799999999999999985 444555555567789998764
No 22
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=3.4e-20 Score=195.34 Aligned_cols=229 Identities=14% Similarity=0.152 Sum_probs=178.4
Q ss_pred CCEEEEEec-ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCC----eEEEEEcCCCcc--eEEEcCCCC
Q psy952 16 KPWLIFSNK-YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAK----TIYRSRVGSTEK--ERVIRHDSH 88 (573)
Q Consensus 16 ~~~l~~s~~-~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~----~I~~~~~~g~~~--~~i~~~~~~ 88 (573)
...|++++. +.|+++++++..++.+...+..|.+|++|+.++.|||+|...+ .++.+..+|... ..+. .+.
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~--~~~ 226 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT--KGQ 226 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE--ECS
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec--cCC
Confidence 356777776 7899999998777777778888999999998888999998543 567777776543 2232 467
Q ss_pred CcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec--cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC--
Q psy952 89 GLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK--TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN-- 164 (573)
Q Consensus 89 ~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~--~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~-- 164 (573)
.|.+|++|+..++|||+|...++|+++++++.....+. .....|++||++|...+|||++.. ..+|.+++++|..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~-~~~I~~~~~d~~~~~ 305 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN-QHYILRSDYDWKTKR 305 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC-CCEEEEEeCCccccc
Confidence 99999999888999999999999999999987764443 344679999999987789999964 6799999999753
Q ss_pred ---cEEEEec------------CCCCCCCc-eEEEec-------cCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-----
Q psy952 165 ---FTRILTH------------EDDIAWPN-ALTLDY-------FTERLYWADAHLDYIASVDLDGKHKHIVISG----- 216 (573)
Q Consensus 165 ---~~~l~~~------------~~~l~~P~-glaiD~-------~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~----- 216 (573)
..++... ...+..|. |++++. .++.|||+|...++|.+++.+|....+...+
T Consensus 306 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~ 385 (430)
T 3tc9_A 306 LTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTS 385 (430)
T ss_dssp ECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSS
T ss_pred ccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCC
Confidence 2334321 12367899 899963 3589999999999999999988544443321
Q ss_pred ----------CccceeEEEeee--CCeEEEecCCCCceEEEec
Q psy952 217 ----------QKVPHVFALTLF--EDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 217 ----------~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~ 247 (573)
..+.+|.+|++. ++.||++|..+++|++++.
T Consensus 386 G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 386 GYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp SCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 015689999997 4899999999999999864
No 23
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.86 E-value=4.2e-20 Score=194.67 Aligned_cols=228 Identities=13% Similarity=0.143 Sum_probs=173.4
Q ss_pred CCEEEEEec-ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCC----CeEEEEEcCCCcc-eEEEcCCCCC
Q psy952 16 KPWLIFSNK-YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAA----KTIYRSRVGSTEK-ERVIRHDSHG 89 (573)
Q Consensus 16 ~~~l~~s~~-~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~-~~i~~~~~~~ 89 (573)
...|++++. +.|+++++.+..+..+...+..|.+|++|+..+ |||+|... ..++++..++... ...+. .+..
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~ 229 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG 229 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence 467888876 899999997766766667788899999998777 99999743 2366666554432 12232 4689
Q ss_pred cceeEEeecCCcEEEEeCCCCeEEEEEcC-CCceeEecc--CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC--
Q psy952 90 LEGLAVDWVGRKLYWLDRHSKQLDVAELD-GTNRKTLKT--AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN-- 164 (573)
Q Consensus 90 p~glavD~~~~~LY~td~~~~~I~~~~ld-g~~~~~l~~--~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~-- 164 (573)
|.+|++|+..++|||+|...++|.+++++ |...+.+.. ....+.+||++|..++|||+|.. ..+|.++++++..
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~-~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG-KHCIYRVDYNRETGK 308 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT-TTEEEEEEBCTTTCC
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC-CCEEEEEeCCCCCcc
Confidence 99999999899999999999999999998 554344432 33456789999987789999965 6799999988532
Q ss_pred ---cEEEEec------------CCCCCCCceEEE---------eccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCC---
Q psy952 165 ---FTRILTH------------EDDIAWPNALTL---------DYFTERLYWADAHLDYIASVDLDGKHKHIVISGQ--- 217 (573)
Q Consensus 165 ---~~~l~~~------------~~~l~~P~glai---------D~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~--- 217 (573)
..+++.. ...+..|.||++ | .++.|||+|+..++|.+++.+|....+...+.
T Consensus 309 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~ 387 (433)
T 4hw6_A 309 LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSRE 387 (433)
T ss_dssp BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCS
T ss_pred cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCc
Confidence 2344421 124678999999 5 68899999999999999999884333322111
Q ss_pred ------------ccceeEEEeee--CCeEEEecCCCCceEEEec
Q psy952 218 ------------KVPHVFALTLF--EDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 218 ------------~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~ 247 (573)
.+.+|.||++. ++.||++|+.+++|+++++
T Consensus 388 ~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 388 WGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 26789999998 6899999999999999874
No 24
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=4.6e-20 Score=194.37 Aligned_cols=208 Identities=16% Similarity=0.173 Sum_probs=164.1
Q ss_pred CCcceEEEEEEc-CCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCC----eEEEEEc
Q psy952 43 DLLNVVAMDFHY-KENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSK----QLDVAEL 117 (573)
Q Consensus 43 ~~~~~~~v~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~----~I~~~~l 117 (573)
.+.+|.+|++|+ ..+.||++|.. ++|+++++++.....++. .+..|.+|++|+.++.|||+|...+ .|.+++.
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 467899999998 58999999998 899999999876666654 6689999999998888999997433 5677787
Q ss_pred CCCcee-EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCC
Q psy952 118 DGTNRK-TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAH 196 (573)
Q Consensus 118 dg~~~~-~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~ 196 (573)
+|.... ..+..+..|.+||++|..|+|||++++ ..+|+++++++.....+.. .....+|++|++++.+++|||+|..
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~-~~~V~~~~~~~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWN-AGQVFRYDFTTQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETT-TTEEEEEETTTTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECC-CCEEEEEECCCCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEECC
Confidence 776641 223457889999999989999999976 6799999999876644442 3455789999999988889999999
Q ss_pred CCeEEEEeCCCCc-----EEEEEeC-------------CccceeE-EEeeeC---------CeEEEecCCCCceEEEecc
Q psy952 197 LDYIASVDLDGKH-----KHIVISG-------------QKVPHVF-ALTLFE---------DHIYWTDWNTKSINRADKF 248 (573)
Q Consensus 197 ~~~I~~~~~dG~~-----~~~l~~~-------------~~~~~p~-~ia~~~---------~~lywtd~~~~~I~~~~~~ 248 (573)
.++|++++++|.. ..++... ..+.+|. ++++.. +.|||+|+.+++|.+++ .
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~ 369 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-P 369 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-T
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-C
Confidence 9999999999752 2333321 1267899 898853 68999999999999998 4
Q ss_pred CCcceEE
Q psy952 249 NGRDYRV 255 (573)
Q Consensus 249 ~g~~~~~ 255 (573)
+|....+
T Consensus 370 ~G~v~~~ 376 (430)
T 3tc9_A 370 QGRVTTF 376 (430)
T ss_dssp TSEEEEE
T ss_pred CCcEEEE
Confidence 5643333
No 25
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.85 E-value=3.7e-19 Score=186.43 Aligned_cols=227 Identities=18% Similarity=0.140 Sum_probs=174.0
Q ss_pred CCCEEEEEec--ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCC-eEEEEEcCCCcceEEE----cCCC
Q psy952 15 IKPWLIFSNK--YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAK-TIYRSRVGSTEKERVI----RHDS 87 (573)
Q Consensus 15 ~~~~l~~s~~--~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~i~----~~~~ 87 (573)
+..-|++++. +.|+++++++..+..+......+. +++++..+.|||++...+ .|++++.++......+ ....
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~ 218 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS 218 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhc
Confidence 4456777765 789999998776665555556677 999999999999998665 9999998765543333 3245
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEe----cc--CCCCcc-eEEEeCCCceEEEEecCCcCeEEEEec
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTL----KT--AIQDPR-GITLHPGIGYVYFSSWNLQAYIGKIGM 160 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l----~~--~~~~P~-~Iavdp~~g~LYwtd~~~~~~I~r~~l 160 (573)
..|.+|++|+.+++|||++. .++|.++++++.....+ .. ....|. +|+++|..+.|||++.. ..+|.++++
T Consensus 219 ~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-~~~I~~~~~ 296 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-LSSVYKITP 296 (409)
T ss_dssp SCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-TTEEEEECT
T ss_pred CCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-CCEEEEEec
Confidence 78999999998999999876 67999999987765555 22 123477 99999988999999964 679999999
Q ss_pred cCCCcEEEEecC------------CCCCCCceEEEeccCCeEEEEeC-CCCeEEEEe-CCCCcEEEEEeC----------
Q psy952 161 DGSNFTRILTHE------------DDIAWPNALTLDYFTERLYWADA-HLDYIASVD-LDGKHKHIVISG---------- 216 (573)
Q Consensus 161 dG~~~~~l~~~~------------~~l~~P~glaiD~~~~~LYw~D~-~~~~I~~~~-~dG~~~~~l~~~---------- 216 (573)
+|.. .+++... ..+.+|.||++|+. ++||++|. ..++|.+++ .+|. ..++...
T Consensus 297 ~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~ 373 (409)
T 3hrp_A 297 DGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGT 373 (409)
T ss_dssp TCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBS
T ss_pred CCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCC
Confidence 9973 3444211 12678999999965 56999999 999999999 5554 4444432
Q ss_pred ---CccceeEEEeeeC-CeEEEecCCCCceEEEec
Q psy952 217 ---QKVPHVFALTLFE-DHIYWTDWNTKSINRADK 247 (573)
Q Consensus 217 ---~~~~~p~~ia~~~-~~lywtd~~~~~I~~~~~ 247 (573)
..+..|.+|++.. +.||++|+.+++|.++..
T Consensus 374 ~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 374 PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 1157899999965 899999999999998863
No 26
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.84 E-value=2.5e-19 Score=188.76 Aligned_cols=207 Identities=13% Similarity=0.116 Sum_probs=157.1
Q ss_pred CCcceEEEEEEcC--CCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCC----CeEEEEE
Q psy952 43 DLLNVVAMDFHYK--ENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHS----KQLDVAE 116 (573)
Q Consensus 43 ~~~~~~~v~~d~~--~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~----~~I~~~~ 116 (573)
.+..|.+|++|+. ++.|||+|.. ++|+++++.+.....++ ..+..|.+|++|+.++ |||+|... ..|.++.
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 4677999999984 7999999988 89999999766555554 3667899999998776 99999743 2355566
Q ss_pred cCCCce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc-CCCcEEEEecCCCCCCCceEEEeccCCeEEEEe
Q psy952 117 LDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-GSNFTRILTHEDDIAWPNALTLDYFTERLYWAD 194 (573)
Q Consensus 117 ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld-G~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D 194 (573)
..+... ...+..+..|.+||+||..|.|||+++. ..+|++++++ |.....++. .....+|.+|++++.+++|||+|
T Consensus 214 ~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~-~~~V~~~d~~~g~~~~~~~~-~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYH-HAMISSYDPATGTLTEEEVM-MDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTT-CSEEEEECTTTCCEEEEEEE-CSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeeccccccccCCCCEEEEeCCCCeEEEEECC-CCEEEEEECCCCeEEEEEec-cCCCCCcccEEEeCCCCEEEEEe
Confidence 555443 1233467889999999999999999975 6789999998 554244442 34456678899999888899999
Q ss_pred CCCCeEEEEeCCCCc-----EEEEEeC-------------CccceeEEEee---------e-CCeEEEecCCCCceEEEe
Q psy952 195 AHLDYIASVDLDGKH-----KHIVISG-------------QKVPHVFALTL---------F-EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 195 ~~~~~I~~~~~dG~~-----~~~l~~~-------------~~~~~p~~ia~---------~-~~~lywtd~~~~~I~~~~ 246 (573)
...++|+++++++.. ..+++.. ..+.+|.+|++ . ++.|||+|+.+++|.+++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 999999999988532 2333321 12678999999 4 468999999999999998
Q ss_pred ccCCcceEE
Q psy952 247 KFNGRDYRV 255 (573)
Q Consensus 247 ~~~g~~~~~ 255 (573)
+ +|...++
T Consensus 372 ~-~G~v~t~ 379 (433)
T 4hw6_A 372 P-EGRVTTY 379 (433)
T ss_dssp T-TSEEEEE
T ss_pred C-CCCEEEE
Confidence 5 6643333
No 27
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.83 E-value=1.6e-18 Score=181.44 Aligned_cols=207 Identities=14% Similarity=0.114 Sum_probs=161.6
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCC-eEEEEEcCCCc
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSK-QLDVAELDGTN 121 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~-~I~~~~ldg~~ 121 (573)
.+..|.+|++|+ ++.|||+|..+++|+++++++.....++.. ...|. |++++.++.|||++...+ +|++++.++..
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred ccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 367899999995 678999999999999999997766666554 45777 999999999999998654 89999988765
Q ss_pred eeEec----c-CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec--CCC-CCCCc-eEEEeccCCeEEE
Q psy952 122 RKTLK----T-AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH--EDD-IAWPN-ALTLDYFTERLYW 192 (573)
Q Consensus 122 ~~~l~----~-~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~--~~~-l~~P~-glaiD~~~~~LYw 192 (573)
....+ . ....|++||++|..|.||+++. ..+|+++++++.....+... ... ...|. +|++++.+++|||
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 43222 3 6678999999999999999884 56899999987765555210 111 22356 9999988899999
Q ss_pred EeCCCCeEEEEeCCCCcEEEEEeC------------CccceeEEEeee-CCeEEEecC-CCCceEEEeccCCcceE
Q psy952 193 ADAHLDYIASVDLDGKHKHIVISG------------QKVPHVFALTLF-EDHIYWTDW-NTKSINRADKFNGRDYR 254 (573)
Q Consensus 193 ~D~~~~~I~~~~~dG~~~~~l~~~------------~~~~~p~~ia~~-~~~lywtd~-~~~~I~~~~~~~g~~~~ 254 (573)
+|...++|++++++|....++... ..+..|.+|++. ++.|||+|+ .+++|++++..+|....
T Consensus 284 ~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp EETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 999999999999999743332222 115679999996 467999999 99999999966675433
No 28
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.82 E-value=1.9e-18 Score=172.71 Aligned_cols=235 Identities=13% Similarity=0.250 Sum_probs=178.0
Q ss_pred CCCceeeCCCCCCEEEEEe---cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECC-------------CCe
Q psy952 5 DESTCKRRDSIKPWLIFSN---KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVA-------------AKT 68 (573)
Q Consensus 5 dg~~C~~~~~~~~~l~~s~---~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~-------------~~~ 68 (573)
.|.-|.. ..+|+|++ ...|++++++|+..+.+... .+.- +.+.++.||+++.. ...
T Consensus 18 ~g~~~~~----g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~~--i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~ 89 (302)
T 3s25_A 18 AGLFCES----DGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAMY--INADKNYVYYVRNNNQKITSQTFFSYDRNS 89 (302)
T ss_dssp TTCEEEE----TTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEEE--EEECSSEEEEEEECC------CCSSCCSEE
T ss_pred ceEEEEe----CCEEEEEeCCCCceEEEEcCCCCCCEEccCC--ceee--EEEcCCEEEEEECCCCcccccceeccCCCe
Confidence 3555653 46899987 57899999999987776443 2333 35569999999765 358
Q ss_pred EEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEe---CCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEE
Q psy952 69 IYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLD---RHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVY 145 (573)
Q Consensus 69 I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td---~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LY 145 (573)
|++++++|+..+.|.. .. +.++...++.|||++ .....|++++++|+.++.|..... ++++|..+.||
T Consensus 90 Iy~i~~dg~~~~~l~~-~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy 160 (302)
T 3s25_A 90 LCRIKRNGHGSTVLDP-DP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFY 160 (302)
T ss_dssp EEEEETTSCCCEEEEC-SC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEE
T ss_pred EEEEeCCCCcceEeec-CC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEE
Confidence 9999999998766543 21 335555799999999 567799999999999888875432 45688899999
Q ss_pred EEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCC-CeEEEEeCCCCcEEEEEeCCccceeEE
Q psy952 146 FSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL-DYIASVDLDGKHKHIVISGQKVPHVFA 224 (573)
Q Consensus 146 wtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~-~~I~~~~~dG~~~~~l~~~~~~~~p~~ 224 (573)
|++. ..+.|+++.++|..++.|. .. +..+++.|.++.|||+++.. .+|++++++|+.+++|.... + | .
T Consensus 161 ~t~~-g~~~Iy~~~l~g~~~~~l~--~~----~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~-~--~-~ 229 (302)
T 3s25_A 161 YNNP-KNGQLYRYDTASQSEALFY--DC----NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEAN-I--E-H 229 (302)
T ss_dssp EECT-TTCCEEEEETTTTEEEEEE--CS----CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSC-E--E-E
T ss_pred EEeC-CCceEEEEECCCCCEEEEe--CC----CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCC-c--c-e
Confidence 9996 4679999999999988877 33 33445668899999999865 58999999999998886543 3 3 3
Q ss_pred EeeeCCeEEEe-cCCCCceEEEeccCCcceEEEcccCCCceeeeeee
Q psy952 225 LTLFEDHIYWT-DWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYH 270 (573)
Q Consensus 225 ia~~~~~lywt-d~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~ 270 (573)
+++.+++|||+ +.....|++++ .+|+.++.|... ....|.++.
T Consensus 230 ~~~~g~~Iy~~~~~~~~~i~~~~-~DG~~r~~l~~~--~~~~i~i~~ 273 (302)
T 3s25_A 230 YNVYGSLIFYQRGGDNPALCVVK-NDGTGFKELAKG--EFCNINVTS 273 (302)
T ss_dssp EEEETTEEEEEECSSSCEEEEEE-TTSCCCEEEEES--CEEEEEECS
T ss_pred EEECCCEEEEEECCCCcEEEEEE-CCCCccEEeeCC--ccceEEEeC
Confidence 88899999997 55668899997 688887777653 233555544
No 29
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=1.1e-17 Score=176.35 Aligned_cols=229 Identities=16% Similarity=0.146 Sum_probs=171.5
Q ss_pred CEEEEEec--ccEEEEEcCCCceeeccc----CCcceEEEEE-------EcCCCEEEEEECCCC------eEEEEEcCC-
Q psy952 17 PWLIFSNK--YYVRNMSLDATQYSLVHQ----DLLNVVAMDF-------HYKENRFYFADVAAK------TIYRSRVGS- 76 (573)
Q Consensus 17 ~~l~~s~~--~~I~~i~l~g~~~~~~~~----~~~~~~~v~~-------d~~~~~ly~~d~~~~------~I~~~~~~g- 76 (573)
..|+++.. +.|++|++.+..++.+.. .+..|.+|+| |...++||++|...+ .|+++..+.
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 34555543 689999998877765543 2446999999 988888999998762 477775443
Q ss_pred -Ccce----EEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC-------CCce------------eEec--cCCC
Q psy952 77 -TEKE----RVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD-------GTNR------------KTLK--TAIQ 130 (573)
Q Consensus 77 -~~~~----~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld-------g~~~------------~~l~--~~~~ 130 (573)
.... .++. .+..|.+|++|+.++.||+++...++|.+++++ +... +.+. ....
T Consensus 232 G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 232 GTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp SCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred Cceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 3221 2333 457999999999999999999999999999997 3322 2232 2345
Q ss_pred CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCc-----EEEEec------------CCCCCCCc-eEEEec------c
Q psy952 131 DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF-----TRILTH------------EDDIAWPN-ALTLDY------F 186 (573)
Q Consensus 131 ~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~-----~~l~~~------------~~~l~~P~-glaiD~------~ 186 (573)
.|++||++|...+||++|+. ..+|.+++++|... .+++.. ...|..|. ++++|. .
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~-~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~ 389 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVIN-NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE 389 (496)
T ss_dssp CCEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC
T ss_pred CceEEEEcCCCCEEEEEeCC-CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccC
Confidence 69999999987789999965 78999999998653 344421 12467899 888873 5
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEEE-eCC---------------------ccceeEEEeeeC--CeEEEecCCCCce
Q psy952 187 TERLYWADAHLDYIASVDLDGKHKHIVI-SGQ---------------------KVPHVFALTLFE--DHIYWTDWNTKSI 242 (573)
Q Consensus 187 ~~~LYw~D~~~~~I~~~~~dG~~~~~l~-~~~---------------------~~~~p~~ia~~~--~~lywtd~~~~~I 242 (573)
++.||++|+.+++|.+++.+|. ..+++ .+. .+.+|.||++.. +.||++|..+++|
T Consensus 390 ~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rI 468 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTI 468 (496)
T ss_dssp CEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEE
Confidence 7899999999999999999984 44443 210 267899999975 7999999999999
Q ss_pred EEEecc
Q psy952 243 NRADKF 248 (573)
Q Consensus 243 ~~~~~~ 248 (573)
++++..
T Consensus 469 rki~~~ 474 (496)
T 3kya_A 469 RTISME 474 (496)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999753
No 30
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=4e-18 Score=179.66 Aligned_cols=208 Identities=15% Similarity=0.230 Sum_probs=160.4
Q ss_pred CCcceEEEEEEc-CCCEEEEEECCCCeEEEEEcCCCcceEEEcCC---CCCcceeEE-------eecCCcEEEEeCCCC-
Q psy952 43 DLLNVVAMDFHY-KENRFYFADVAAKTIYRSRVGSTEKERVIRHD---SHGLEGLAV-------DWVGRKLYWLDRHSK- 110 (573)
Q Consensus 43 ~~~~~~~v~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~---~~~p~glav-------D~~~~~LY~td~~~~- 110 (573)
.+..|.+|+||+ ..++||+++...+.|+++++++....+++..+ +..|.+|++ |..++.||+++...+
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 356799999998 48999999998889999999988777776543 457999999 988888999998652
Q ss_pred -----eEEEEEcC--CCcee----EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc--------CCC-------
Q psy952 111 -----QLDVAELD--GTNRK----TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD--------GSN------- 164 (573)
Q Consensus 111 -----~I~~~~ld--g~~~~----~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld--------G~~------- 164 (573)
.|.+++.. |.... ..+..+.+|.+|++||..++||++++. ..+|+|++++ |..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~-~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYE-KGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETT-TTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECC-CCEEEEEecccccccccCceeecccccc
Confidence 47777533 34431 233457789999999999999999975 5789999997 332
Q ss_pred ----cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcE-----EEEEeC-------------Ccccee
Q psy952 165 ----FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHK-----HIVISG-------------QKVPHV 222 (573)
Q Consensus 165 ----~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~-----~~l~~~-------------~~~~~p 222 (573)
.+.++. .....+|.+|++++.++.||++|+..++|++++++|... .+++.. ..+.+|
T Consensus 296 ~~g~~~~l~~-~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 296 NPNTFKQLFT-IADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp CTTTEEEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred cccccceeEe-cCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 123332 345678999999998888999999999999999988542 334321 126789
Q ss_pred E-EEeee--------CCeEEEecCCCCceEEEeccCCcce
Q psy952 223 F-ALTLF--------EDHIYWTDWNTKSINRADKFNGRDY 253 (573)
Q Consensus 223 ~-~ia~~--------~~~lywtd~~~~~I~~~~~~~g~~~ 253 (573)
. ++++. ++.||++|+.+++|++++ .+|...
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~ 413 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVS 413 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEE
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEE
Confidence 9 78885 468999999999999998 466433
No 31
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=1.4e-17 Score=169.05 Aligned_cols=226 Identities=16% Similarity=0.121 Sum_probs=169.3
Q ss_pred ccCCcceEEEEEEcCCCEEEEEECCC------------------------CeEEEEEcCCCcceEEE-cCCCCCcceeEE
Q psy952 41 HQDLLNVVAMDFHYKENRFYFADVAA------------------------KTIYRSRVGSTEKERVI-RHDSHGLEGLAV 95 (573)
Q Consensus 41 ~~~~~~~~~v~~d~~~~~ly~~d~~~------------------------~~I~~~~~~g~~~~~i~-~~~~~~p~glav 95 (573)
...+..+.+|++|+ .++||+++... +.|++++.+........ ...+..|.+||+
T Consensus 20 ~~~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 20 YLLPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp GCCCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred ceecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 34577899999996 57999999877 36899988643332233 234679999999
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCC--ceeEec---------cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGT--NRKTLK---------TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~--~~~~l~---------~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
|+ .++||++|...++|.+++++|. ....+. ..+..|.+||++|..+.||+++.....+|.+.+.+|..
T Consensus 99 d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~ 177 (329)
T 3fvz_A 99 DT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF 177 (329)
T ss_dssp CT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE
T ss_pred CC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE
Confidence 96 5569999999999999999987 444442 24557999999998899999995236789999999987
Q ss_pred cEEEEec-------CCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeCCccceeEEEeee-------C
Q psy952 165 FTRILTH-------EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKVPHVFALTLF-------E 229 (573)
Q Consensus 165 ~~~l~~~-------~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~~~~~~p~~ia~~-------~ 229 (573)
...+... ...+..|.+|++|+.+++||++|...++|.+++++ |.....+........|+++++. +
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 6665320 12456799999998789999999999999999998 7766665432213456666554 3
Q ss_pred CeEEEecCCCCceEEEeccCCcceEEEc---ccCCCceeeee
Q psy952 230 DHIYWTDWNTKSINRADKFNGRDYRVLR---NTTHRPYDIHV 268 (573)
Q Consensus 230 ~~lywtd~~~~~I~~~~~~~g~~~~~l~---~~~~~p~~i~v 268 (573)
+.+|+++....+|+.++..+|+...++. ..+..|.+|++
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~ 299 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA 299 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE
Confidence 4566666667789999888888777663 34567888776
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=5.9e-18 Score=165.88 Aligned_cols=225 Identities=16% Similarity=0.217 Sum_probs=168.1
Q ss_pred CCEEEE-Ee--cccEEEEEcCCCceeec-ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 16 KPWLIF-SN--KYYVRNMSLDATQYSLV-HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 16 ~~~l~~-s~--~~~I~~i~l~g~~~~~~-~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
...|++ ++ .+.|++++..+...... ...+..|.+|++|+ +++||+++. .+.|++++.++.....+...++..|.
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~ 111 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPE 111 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEE
T ss_pred CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCc
Confidence 344666 53 46788888766544332 33456799999997 456999998 78999999988765544444567899
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
+|++|. .++||+++...+.|.+++.......... ..+..|.+|++++ .|.||+++.. ...|.+.++++.......
T Consensus 112 ~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~~~~~~~~~- 187 (270)
T 1rwi_B 112 GLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTD-NNRVVKLEAESNNQVVLP- 187 (270)
T ss_dssp EEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGG-GTEEEEECTTTCCEEECC-
T ss_pred ceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECC-CCEEEEEecCCCceEeec-
Confidence 999997 5679999988889999965543333222 4566899999999 6679999964 568999999887655443
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~ 249 (573)
...+..|.+|++|+. ++||+++...+.|.+++.+|.....+.... +..|.+|++. ++.||++++.+++|.++++..
T Consensus 188 -~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 188 -FTDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTVLPFTG-LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp -CSSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCSCCEECCCCS-CSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred -ccCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCCcceeeccCC-CCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 455688999999964 599999999999999999987665543333 5789999996 468999999999999887543
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=1.7e-17 Score=162.62 Aligned_cols=214 Identities=15% Similarity=0.228 Sum_probs=158.8
Q ss_pred ceEEEEEEcCCCEEEE-EECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeE
Q psy952 46 NVVAMDFHYKENRFYF-ADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKT 124 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~-~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~ 124 (573)
.|.+|++|+ +++||+ ++...+.|++++.++.....+...++..|.+|++|+ .++||+++. .+.|.++++++.....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEee
Confidence 899999997 456999 888889999998866544433334557899999997 456999998 7899999999877655
Q ss_pred ec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEE
Q psy952 125 LK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASV 203 (573)
Q Consensus 125 l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~ 203 (573)
+. ..+..|.+|++++ .|.||+++.. ...|.+.+.......... ...+..|.+|++|+ +++||+++...+.|.++
T Consensus 102 ~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDT-QGAVYVADRG-NNRVVKLAAGSKTQTVLP--FTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CCCCSCSSEEEEEECT-TCCEEEEEGG-GTEEEEECTTCCSCEECC--CCSCCSCCCEEECT-TCCEEEEEGGGTEEEEE
T ss_pred eecCCcCCCcceEECC-CCCEEEEECC-CCEEEEEECCCceeEeec--cccCCCceeEEEeC-CCCEEEEECCCCEEEEE
Confidence 44 4567899999999 6789999854 567888865443333322 35567899999996 55799999988999999
Q ss_pred eCCCCcEEEEEeCCccceeEEEeeeC-CeEEEecCCCCceEEEeccCCcceEEE-cccCCCceeeeee
Q psy952 204 DLDGKHKHIVISGQKVPHVFALTLFE-DHIYWTDWNTKSINRADKFNGRDYRVL-RNTTHRPYDIHVY 269 (573)
Q Consensus 204 ~~dG~~~~~l~~~~~~~~p~~ia~~~-~~lywtd~~~~~I~~~~~~~g~~~~~l-~~~~~~p~~i~v~ 269 (573)
+.++.......... +..|.+|++.. +.||++++..++|.+++..+ .....+ ...+..|.+|++.
T Consensus 177 ~~~~~~~~~~~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p~~i~~~ 242 (270)
T 1rwi_B 177 EAESNNQVVLPFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTPLAVAVD 242 (270)
T ss_dssp CTTTCCEEECCCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTC-SCCEECCCCSCSCEEEEEEC
T ss_pred ecCCCceEeecccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCC-CcceeeccCCCCCceeEEEC
Confidence 99987765443333 57899999964 59999999999999998643 333333 2334567777654
No 34
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=1e-16 Score=162.70 Aligned_cols=219 Identities=10% Similarity=0.062 Sum_probs=160.3
Q ss_pred cEEEEEcCCCcee-ecc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC--cceEEE--------cCCCCCccee
Q psy952 26 YVRNMSLDATQYS-LVH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST--EKERVI--------RHDSHGLEGL 93 (573)
Q Consensus 26 ~I~~i~l~g~~~~-~~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~--~~~~i~--------~~~~~~p~gl 93 (573)
.|++++.+...+. ... ..+..|.+|++|+ ++.||++|...++|++++++|. ....+. ...+..|.+|
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 4888888643332 222 3456899999996 5569999999999999999886 333332 2335689999
Q ss_pred EEeecCCcEEEEeC-CCCeEEEEEcCCCceeEecc----------CCCCcceEEEeCCCceEEEEecCCcCeEEEEecc-
Q psy952 94 AVDWVGRKLYWLDR-HSKQLDVAELDGTNRKTLKT----------AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD- 161 (573)
Q Consensus 94 avD~~~~~LY~td~-~~~~I~~~~ldg~~~~~l~~----------~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld- 161 (573)
++|+..++||++|. ..++|.+++.+|.....+.. .+..|.+||++|..+.||+++++ ..+|.+.+++
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-NGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-TTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-CCEEEEEECCC
Confidence 99987899999996 78999999999988777642 34569999999987999999975 6789999998
Q ss_pred CCCcEEEEecCCCCCCCceEEEec-----cCCeEEEEeCCCCeEEEEeCC-CCcEEEEEe-CCccceeEEEeee-CCeEE
Q psy952 162 GSNFTRILTHEDDIAWPNALTLDY-----FTERLYWADAHLDYIASVDLD-GKHKHIVIS-GQKVPHVFALTLF-EDHIY 233 (573)
Q Consensus 162 G~~~~~l~~~~~~l~~P~glaiD~-----~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~-~~~~~~p~~ia~~-~~~ly 233 (573)
|.....+.. ......|.++++.+ .++++|+++....+|..+++. |.....+.. ...+..|.+|++. ++.||
T Consensus 228 G~~~~~~~~-~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 228 KEFVREIKH-ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp CCEEEEECC-TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred CcEEEEEec-cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 766555531 12223455555543 234566666667789999965 443333321 1227789999995 45899
Q ss_pred EecCCCCceEEEec
Q psy952 234 WTDWNTKSINRADK 247 (573)
Q Consensus 234 wtd~~~~~I~~~~~ 247 (573)
++++.+++|.+++.
T Consensus 307 vad~~~~~I~~~~~ 320 (329)
T 3fvz_A 307 IGDAHTNTVWKFTL 320 (329)
T ss_dssp EEESSSCCEEEEEE
T ss_pred EEECCCCEEEEEeC
Confidence 99999999999874
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=2.9e-16 Score=155.40 Aligned_cols=225 Identities=11% Similarity=0.117 Sum_probs=171.9
Q ss_pred CCEEEEEe--cccEEEEEcCCCceeecc------cCCcceEEEEEEcCCCEEEEEECC-CCeEEEEEcCCCcceEEEcCC
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQYSLVH------QDLLNVVAMDFHYKENRFYFADVA-AKTIYRSRVGSTEKERVIRHD 86 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~~~~~~------~~~~~~~~v~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~i~~~~ 86 (573)
...|++++ .+.|+++++++.....+. ..+..|.+|+++..+++||+++.. .+.|++++.+|.....+....
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~ 119 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATI 119 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTT
T ss_pred CCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCcc
Confidence 34566664 467999998876443332 124579999998778999999975 789999998776555444444
Q ss_pred CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec--cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 87 SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK--TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 87 ~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~--~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
+..|.+|++|. .++||+++...+.|.+++.+|.....+. ..+..|++|++++ .|.||+++.. ...|.+.+.+|..
T Consensus 120 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 120 LQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNR-AHCVKVFNYEGQY 196 (286)
T ss_dssp CSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGG-GTEEEEEETTCCE
T ss_pred CCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEECC-CCEEEEEcCCCCE
Confidence 57899999997 4579999998899999999987766654 3566799999999 6789999854 6789999998876
Q ss_pred cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC-eEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCce
Q psy952 165 FTRILTHEDDIAWPNALTLDYFTERLYWADAHLD-YIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSI 242 (573)
Q Consensus 165 ~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~-~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I 242 (573)
...+.. ...+..|.+|++|+ +++||+++...+ +|.+++.+|.....+........|.+|++. ++.||+++. .++|
T Consensus 197 ~~~~~~-~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~-~~~v 273 (286)
T 1q7f_A 197 LRQIGG-EGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK-DYRL 273 (286)
T ss_dssp EEEESC-TTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET-TTEE
T ss_pred EEEEcc-CCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC-CCeE
Confidence 555431 22367899999996 569999999886 999999999877776654324569999995 578999975 6777
Q ss_pred EEEe
Q psy952 243 NRAD 246 (573)
Q Consensus 243 ~~~~ 246 (573)
...+
T Consensus 274 ~v~~ 277 (286)
T 1q7f_A 274 YIYR 277 (286)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 36
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=5.6e-16 Score=153.63 Aligned_cols=246 Identities=15% Similarity=0.173 Sum_probs=178.4
Q ss_pred CCCEEEEEec--ccEEEEEcCCCceeecc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 15 IKPWLIFSNK--YYVRNMSLDATQYSLVH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 15 ~~~~l~~s~~--~~I~~i~l~g~~~~~~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
+...|++++. +.|.++++++....... .....|.+|++|. ++.||+++...+.|++++.++......+......|.
T Consensus 29 ~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~ 107 (300)
T 2qc5_A 29 EDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPY 107 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE
T ss_pred CCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCc
Confidence 3455666653 68999988843222222 2346799999994 678999998888999999885433222222346899
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
+|++|. .++||+++...+.|.+++++|......+ .....|.+|++++ .|.||+++.. ...|.+.+.+|.......
T Consensus 108 ~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~- 183 (300)
T 2qc5_A 108 GITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGS-DNALWFTENQ-NNSIGRITNTGKLEEYPL- 183 (300)
T ss_dssp EEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSSEEEEETT-TTEEEEECTTCCEEEEEC-
T ss_pred cceECC-CCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECC-CCCEEEEecC-CCeEEEECCCCcEEEeeC-
Confidence 999995 6789999988889999999866554333 3567799999998 5679999853 568999999776544322
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~ 249 (573)
...+..|.+|++|+ +++||+++...+.|.+++.+|.......... ...|.+|++. ++.||+++...+.|.+++. +
T Consensus 184 -~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 259 (300)
T 2qc5_A 184 -PTNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGEISEYDIPTP-NARPHAITAGKNSEIWFTEWGANQIGRITN-D 259 (300)
T ss_dssp -SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSST-TCCEEEEEECSTTCEEEEETTTTEEEEECT-T
T ss_pred -CCCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCcEEEEECCCC-CCCceEEEECCCCCEEEeccCCCeEEEECC-C
Confidence 45567899999996 6799999999999999999776554433333 6789999996 5689999999999999986 5
Q ss_pred CcceEE-EcccCCCceeeeee
Q psy952 250 GRDYRV-LRNTTHRPYDIHVY 269 (573)
Q Consensus 250 g~~~~~-l~~~~~~p~~i~v~ 269 (573)
|..... +......|.+|++.
T Consensus 260 g~~~~~~~~~~~~~~~~i~~~ 280 (300)
T 2qc5_A 260 NTIQEYQLQTENAEPHGITFG 280 (300)
T ss_dssp SCEEEEECCSTTCCCCCEEEC
T ss_pred CcEEEEECCccCCccceeEeC
Confidence 543332 22234566666553
No 37
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.76 E-value=1.3e-16 Score=161.35 Aligned_cols=235 Identities=11% Similarity=0.071 Sum_probs=171.6
Q ss_pred CCceeeCCCCCCEEEEEe-cccEEEEEcCCCceeecc--------------------cCCcceEEEEEEcCCCEEEEEEC
Q psy952 6 ESTCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVH--------------------QDLLNVVAMDFHYKENRFYFADV 64 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~--------------------~~~~~~~~v~~d~~~~~ly~~d~ 64 (573)
+....+.+....+|++.. .+.|++++.++..+.... .....|.+|++++.+++||++|.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 344444432222244333 468999988775544321 11246999999976899999998
Q ss_pred CCCeEEEEEcCCCcceEEEcC----CCCCcceeEEeecCCcEEEEeCC-----------------CCeEEEEEcCCCcee
Q psy952 65 AAKTIYRSRVGSTEKERVIRH----DSHGLEGLAVDWVGRKLYWLDRH-----------------SKQLDVAELDGTNRK 123 (573)
Q Consensus 65 ~~~~I~~~~~~g~~~~~i~~~----~~~~p~glavD~~~~~LY~td~~-----------------~~~I~~~~ldg~~~~ 123 (573)
.. .|+++++++...+.+... .+..|.+|++|...++||++|.. .+.|.+++.++...+
T Consensus 100 ~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 75 488998876555544321 24579999999746799999965 267999998876666
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCC---CcEEEEecCCCCCCCceEEEeccCCeEEEEeCC----
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS---NFTRILTHEDDIAWPNALTLDYFTERLYWADAH---- 196 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~---~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~---- 196 (573)
++...+..|.+|++++..++||+++.. ..+|.++++++. ..+++. . +..|.||++|. +++||+++..
T Consensus 179 ~~~~~~~~p~gia~~~dg~~lyv~d~~-~~~I~~~~~~~~~~~~~~~~~--~--~~gP~gi~~d~-~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADSSFVLVAEFL-SHQIVKYWLEGPKKGTAEVLV--K--IPNPGNIKRNA-DGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEESCCCEEEECTTSSEEEEEEGG-GTEEEEEESSSTTTTCEEEEE--E--CSSEEEEEECT-TSCEEEEEEEETTS
T ss_pred EeccCCccCcceEECCCCCEEEEEeCC-CCeEEEEECCCCcCCccceEE--e--CCCCCCeEECC-CCCEEEEecCcccc
Confidence 666778889999999977789999964 578999999873 334444 2 22299999996 5689999876
Q ss_pred ------CCeEEEEeCCCCcEEEEEeCC--ccceeEEEeeeCCeEEEecCCCCceEEEec
Q psy952 197 ------LDYIASVDLDGKHKHIVISGQ--KVPHVFALTLFEDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 197 ------~~~I~~~~~dG~~~~~l~~~~--~~~~p~~ia~~~~~lywtd~~~~~I~~~~~ 247 (573)
.+.|.+++.+|...+.+.... .+..|.+++..+++||+++...+.|.+++.
T Consensus 253 ~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp STTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred cccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEec
Confidence 568999999987776665421 146788888889999999999999999874
No 38
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.74 E-value=1.3e-18 Score=136.64 Aligned_cols=76 Identities=46% Similarity=1.029 Sum_probs=68.6
Q ss_pred CCCCCCCceecCCCcccCCCcccCCCCCCCCCCCC-CCCccCCcCCCC-CCcCCCCCCCccccCCccccCCCCCCCCCCC
Q psy952 408 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDE-PAYMCRQRNCTK-GWERCPGKTNYRCIPKWLFCDGKDDCRDGSD 485 (573)
Q Consensus 408 ~~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE-~~~~C~~~~C~~-~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sD 485 (573)
..|.++ +|+|.+|+|||..|+|||..||.|+||| .+ |....|.+ ++|+|. +++||+..|+|||+.||.||||
T Consensus 3 ~~C~~~-~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~--C~~~~C~~~~~f~C~---~g~CI~~~~~CDG~~DC~DgSD 76 (82)
T 2fyj_A 3 RTCPPN-QFSCASGRCIPISWTCDLDDDCGDRSDESAS--CAYPTCFPLTQFTCN---NGRCININWRCDNDNDCGDNSD 76 (82)
T ss_dssp SSSCTT-EEETTSSCEEETTSSSSCSSSSCSTTTTTSS--CCCSSSCSSSEEECT---TSCEEETTCBSSSSBCCSSSSS
T ss_pred CCCCCC-ceEeCCCCEEeccccCCCcccCCCccccccc--cccccCCCCCceECC---CCCeEcHHHccCCCCcCCCCcc
Confidence 357777 9999999999999999999999999999 55 87777965 899998 6899999999999999999999
Q ss_pred CCCCCC
Q psy952 486 ELPQNC 491 (573)
Q Consensus 486 e~~~~C 491 (573)
| .+|
T Consensus 77 E--~~C 80 (82)
T 2fyj_A 77 E--AGC 80 (82)
T ss_dssp C--SCC
T ss_pred c--cCC
Confidence 9 666
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=4.5e-16 Score=154.08 Aligned_cols=220 Identities=12% Similarity=0.169 Sum_probs=168.3
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc-----CCCCCcceeEEeecCCcEEEEeCC-CCeEEEEE
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR-----HDSHGLEGLAVDWVGRKLYWLDRH-SKQLDVAE 116 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~-----~~~~~p~glavD~~~~~LY~td~~-~~~I~~~~ 116 (573)
.+..|.+|++++ ++.||+++...+.|+++++++.....+.. ..+..|.+|+++...++||+++.. .+.|.+++
T Consensus 28 ~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 456799999996 46799999999999999998765444322 124689999997678999999964 78999999
Q ss_pred cCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeC
Q psy952 117 LDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADA 195 (573)
Q Consensus 117 ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~ 195 (573)
.+|.....+. ..+..|++|++++ .|.||+++.. ...|.+.+.+|.....+.. ...+..|++|++|+ +++||+++.
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~~-~~~~~~p~~i~~~~-~g~l~v~~~ 182 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECK-VMRVIIFDQNGNVLHKFGC-SKHLEFPNGVVVND-KQEIFISDN 182 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETT-TTEEEEECTTSCEEEEEEC-TTTCSSEEEEEECS-SSEEEEEEG
T ss_pred CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECC-CCEEEEEcCCCCEEEEeCC-CCccCCcEEEEECC-CCCEEEEEC
Confidence 8888776664 3566799999999 5789999854 5789999998876555541 24567899999996 578999999
Q ss_pred CCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCC-ceEEEeccCCcceEEEcccC--CCceeeee
Q psy952 196 HLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTK-SINRADKFNGRDYRVLRNTT--HRPYDIHV 268 (573)
Q Consensus 196 ~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~-~I~~~~~~~g~~~~~l~~~~--~~p~~i~v 268 (573)
..+.|.+++.+|.....+.....+..|.+|++. ++.||+++...+ +|.+++ .+|+....+.... ..|.+|++
T Consensus 183 ~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 183 RAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp GGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC-CCCCEEEEEcccCCCCcceeEEE
Confidence 999999999998766555432225789999996 578999999886 999887 4566555554322 23666654
No 40
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.74 E-value=3.9e-16 Score=155.97 Aligned_cols=219 Identities=14% Similarity=0.136 Sum_probs=165.0
Q ss_pred ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCC
Q psy952 41 HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGT 120 (573)
Q Consensus 41 ~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~ 120 (573)
......+.|+.|++.++.|||+|...++|+++++++.....+.. . ..|.+|++++.+ +||++. .+.|.++++++.
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~-~~~~~i~~~~dG-~l~v~~--~~~l~~~d~~~g 83 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM-D-APVSSVALRQSG-GYVATI--GTKFCALNWKEQ 83 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC-S-SCEEEEEEBTTS-SEEEEE--TTEEEEEETTTT
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeC-C-CceEEEEECCCC-CEEEEE--CCeEEEEECCCC
Confidence 34566789999999999999999999999999998765544332 2 579999999754 588876 468999999866
Q ss_pred ceeEecc-----CCCCcceEEEeCCCceEEEEecC----------CcCeEEEEeccCCCcEEEEecCCCCCCCceEEEec
Q psy952 121 NRKTLKT-----AIQDPRGITLHPGIGYVYFSSWN----------LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDY 185 (573)
Q Consensus 121 ~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~----------~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~ 185 (573)
..+.+.. ....|++|++|| .|.||+++.+ ....|++++.+|.... +. ..+..|+||++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~---~~~~~pngi~~sp 158 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YF---DQVDISNGLDWSL 158 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EE---EEESBEEEEEECT
T ss_pred cEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Ee---eccccccceEEcC
Confidence 5555542 234589999999 5779998743 2357999988875433 33 5677899999999
Q ss_pred cCCeEEEEeCCCCeEEEEeCC---CC--cEEEEEeCC-ccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 186 FTERLYWADAHLDYIASVDLD---GK--HKHIVISGQ-KVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 186 ~~~~LYw~D~~~~~I~~~~~d---G~--~~~~l~~~~-~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
+++.|||++...++|++++++ |. +++++..-. ....|.+|+++ ++.||++.+..++|.++++.+|+....+..
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 889999999999999999874 32 234444321 13589999996 578999999999999999888887776655
Q ss_pred cCCCceeeeee
Q psy952 259 TTHRPYDIHVY 269 (573)
Q Consensus 259 ~~~~p~~i~v~ 269 (573)
....|..+++-
T Consensus 239 p~~~~t~~~f~ 249 (297)
T 3g4e_A 239 PVDKTTSCCFG 249 (297)
T ss_dssp SSSBEEEEEEE
T ss_pred CCCCceEEEEe
Confidence 44556665543
No 41
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.74 E-value=2.7e-19 Score=139.49 Aligned_cols=78 Identities=41% Similarity=0.988 Sum_probs=66.4
Q ss_pred CCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCcccccCCCCCCCcCCCce
Q psy952 451 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPLESLGSVCNGVNDCKDNITSDETHARCPSNITCPPHHL 530 (573)
Q Consensus 451 ~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~~~C~~c~~~~~Cd~~~dC~dg~~~de~~~~C~~~~~C~~~~f 530 (573)
.|.+++|+|. +++|||..|+|||+.||.||||| .+ | ....|.+.+|
T Consensus 2 ~C~~~~F~C~---~g~CI~~~~~CDg~~DC~DgSDE--~~----------------------------C-~~~~C~~~~f 47 (80)
T 2fcw_B 2 TCSQAEFRCH---DGKCISRQFVCDSDRDCLDGSDE--AS----------------------------C-PVLTCGPASF 47 (80)
T ss_dssp CCCTTEEECT---TSCEEEGGGTTSSSCCSTTCTTT--TT----------------------------H-HHHHCCTTEE
T ss_pred CCCCCccCCC---CCCEEeeecccCCcccCCCcccc--cc----------------------------c-ccccCCceee
Confidence 4788999998 68999999999999999999999 33 3 1235678899
Q ss_pred eeCCCCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 531 KCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 531 ~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
+|.++ +|||..|+|||..||.|||||.+.+|.
T Consensus 48 ~C~~g-~Ci~~~~~CDg~~DC~dgsDE~~~~C~ 79 (80)
T 2fcw_B 48 QCNSS-TCIPQLWACDNDPDCEDGSDEWPQRCR 79 (80)
T ss_dssp ECTTS-CEEEGGGTTSSSCCSTTCGGGCGGGC-
T ss_pred ECCCC-CEEecccccCCCcCCCCCCCcCcccCC
Confidence 99998 999999999999999999999544774
No 42
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.74 E-value=2.3e-18 Score=135.36 Aligned_cols=78 Identities=46% Similarity=0.932 Sum_probs=66.4
Q ss_pred cCCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCcccccCCCCCCCcCC-C
Q psy952 450 RNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPLESLGSVCNGVNDCKDNITSDETHARCPSNITCPP-H 528 (573)
Q Consensus 450 ~~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~~~C~~c~~~~~Cd~~~dC~dg~~~de~~~~C~~~~~C~~-~ 528 (573)
..|.+++|+|. +++|||..|+|||+.||.|||||. .+ | ....|.+ .
T Consensus 3 ~~C~~~~f~C~---~g~Ci~~~~~CDg~~DC~DgsDE~-~~----------------------------C-~~~~C~~~~ 49 (82)
T 2fyj_A 3 RTCPPNQFSCA---SGRCIPISWTCDLDDDCGDRSDES-AS----------------------------C-AYPTCFPLT 49 (82)
T ss_dssp SSSCTTEEETT---SSCEEETTSSSSCSSSSCSTTTTT-SS----------------------------C-CCSSSCSSS
T ss_pred CCCCCCceEeC---CCCEEeccccCCCcccCCCccccc-cc----------------------------c-ccccCCCCC
Confidence 35888999998 689999999999999999999992 11 3 2235644 8
Q ss_pred ceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 529 HLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 529 ~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
+|+|.++ +||+..|+|||..||.|||||. +|.
T Consensus 50 ~f~C~~g-~CI~~~~~CDG~~DC~DgSDE~--~C~ 81 (82)
T 2fyj_A 50 QFTCNNG-RCININWRCDNDNDCGDNSDEA--GCS 81 (82)
T ss_dssp EEECTTS-CEEETTCBSSSSBCCSSSSSCS--CCC
T ss_pred ceECCCC-CeEcHHHccCCCCcCCCCcccc--CCC
Confidence 9999999 9999999999999999999998 775
No 43
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=2.6e-15 Score=148.77 Aligned_cols=249 Identities=15% Similarity=0.169 Sum_probs=178.5
Q ss_pred ceeeCCCCCCEEEEEec--ccEEEEEcCCCceee-cc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE
Q psy952 8 TCKRRDSIKPWLIFSNK--YYVRNMSLDATQYSL-VH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI 83 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~~--~~I~~i~l~g~~~~~-~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~ 83 (573)
...+.+ +...|+++.. +.|.++++++ .+.. .. .....|.+|++|+ ++.||+++...+.|++++.++.. +.+.
T Consensus 18 ~~i~~d-~~g~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~-~~~~ 93 (299)
T 2z2n_A 18 YGITVS-DKGKVWITQHKANMISCINLDG-KITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKKGII-KEYT 93 (299)
T ss_dssp EEEEEC-TTSCEEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE-EEEE
T ss_pred cceEEC-CCCCEEEEecCCCcEEEEcCCC-CeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcE-EEEe
Confidence 344433 3455666663 6799999884 3332 22 2346799999996 67899999888899999987543 3232
Q ss_pred -cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc
Q psy952 84 -RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD 161 (573)
Q Consensus 84 -~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld 161 (573)
......|.+|++|. .++||+++...+.|.+++++|....... .....|.+|++++ .|.||+++.. ...|.+.+.+
T Consensus 94 ~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~ 170 (299)
T 2z2n_A 94 LPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGS-DNALWFTENQ-NNAIGRITES 170 (299)
T ss_dssp CSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETT-TTEEEEECTT
T ss_pred CCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCC-CCEEEEEcCC
Confidence 22356899999996 6789999988889999999776654433 3556799999998 5799999853 5689999986
Q ss_pred CCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCC
Q psy952 162 GSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTK 240 (573)
Q Consensus 162 G~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~ 240 (573)
|....... ...+..|.+|++|+ +++||+++...+.|.+++.+|.......... ...|.+|++. ++.||++++..+
T Consensus 171 g~~~~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~ 246 (299)
T 2z2n_A 171 GDITEFKI--PTPASGPVGITKGN-DDALWFVEIIGNKIGRITTSGEITEFKIPTP-NARPHAITAGAGIDLWFTEWGAN 246 (299)
T ss_dssp CCEEEEEC--SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSST-TCCEEEEEECSTTCEEEEETTTT
T ss_pred CcEEEeeC--CCCCCcceeEEECC-CCCEEEEccCCceEEEECCCCcEEEEECCCC-CCCceeEEECCCCCEEEeccCCc
Confidence 65443323 44567899999995 4779999998899999999665433222222 5689999996 568999999999
Q ss_pred ceEEEeccCCcceEE-EcccCCCceeeee
Q psy952 241 SINRADKFNGRDYRV-LRNTTHRPYDIHV 268 (573)
Q Consensus 241 ~I~~~~~~~g~~~~~-l~~~~~~p~~i~v 268 (573)
.|.+++. ++..... +......|.+|++
T Consensus 247 ~i~~~d~-~g~~~~~~~~~~~~~~~~i~~ 274 (299)
T 2z2n_A 247 KIGRLTS-NNIIEEYPIQIKSAEPHGICF 274 (299)
T ss_dssp EEEEEET-TTEEEEEECSSSSCCEEEEEE
T ss_pred eEEEECC-CCceEEEeCCCCCCccceEEe
Confidence 9999987 5543332 2233456777776
No 44
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.74 E-value=1.5e-16 Score=160.81 Aligned_cols=206 Identities=14% Similarity=0.121 Sum_probs=155.4
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC-------------------CCCCcceeEEeecCCcEE
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH-------------------DSHGLEGLAVDWVGRKLY 103 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~-------------------~~~~p~glavD~~~~~LY 103 (573)
.+..|.+|++|+. +.+||++...++|++++.++...+.+... ....|.||++|...++||
T Consensus 17 ~~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 17 PSYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp SSSCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred ccCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 3567999999974 77888899999999999887555444321 124799999997678999
Q ss_pred EEeCCCCeEEEEEcCCCceeEecc-----CCCCcceEEEeCCCceEEEEecCC----------------cCeEEEEeccC
Q psy952 104 WLDRHSKQLDVAELDGTNRKTLKT-----AIQDPRGITLHPGIGYVYFSSWNL----------------QAYIGKIGMDG 162 (573)
Q Consensus 104 ~td~~~~~I~~~~ldg~~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~~----------------~~~I~r~~ldG 162 (573)
+++... .|.++++++...+++.. .+..|.+|++|+..|.||+++... ...|++.+.++
T Consensus 96 v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 999764 58889988665555542 345699999998567999999642 25789988876
Q ss_pred CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCC---cEEEEEeCCccceeEEEeeeC-CeEEEecCC
Q psy952 163 SNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGK---HKHIVISGQKVPHVFALTLFE-DHIYWTDWN 238 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~---~~~~l~~~~~~~~p~~ia~~~-~~lywtd~~ 238 (573)
...+.+. ..+..|+||++++.+++||++|...++|.++++++. ..+++... .. |.+|+++. +.||++++.
T Consensus 175 ~~~~~~~---~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 175 KETTLLL---KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TEEEEEE---EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEEECTTSCEEEEEEE
T ss_pred CEEEEec---cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC--CC-CCCeEECCCCCEEEEecC
Confidence 5555544 457889999999888889999999999999999873 34444432 23 99999964 689999876
Q ss_pred ----------CCceEEEeccCCcceEEEc
Q psy952 239 ----------TKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 239 ----------~~~I~~~~~~~g~~~~~l~ 257 (573)
.++|.+++. +|+....+.
T Consensus 249 ~~~~~~~~~~~~~v~~~d~-~G~~~~~~~ 276 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE-FGNILEVIP 276 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT-TSCEEEEEE
T ss_pred cccccccCCCccEEEEECC-CCCEEEEEE
Confidence 567888885 566555553
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=1e-15 Score=155.30 Aligned_cols=243 Identities=10% Similarity=0.075 Sum_probs=174.6
Q ss_pred EEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC-----CCc
Q psy952 18 WLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS-----HGL 90 (573)
Q Consensus 18 ~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~-----~~p 90 (573)
.|+++. .+.|.++++...+....+.....|.+|++++. ++||+++...+.|.++++.+......+..+. ..|
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 455554 36799999876554333355678999999765 5999999778899999997655443333331 289
Q ss_pred ceeEEeecCCcEEEEeCC-CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCC---------cCeEEEEec
Q psy952 91 EGLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL---------QAYIGKIGM 160 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~---------~~~I~r~~l 160 (573)
.+|++ .+++||+++.+ .+.|.++++........+.....|.+|+++| .|.||++..+. ...|.++++
T Consensus 134 ~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 134 EQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp CCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred ceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEEC
Confidence 99999 48999999984 7899999997654443344456799999999 57799998653 268999988
Q ss_pred cCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEE--EEEeCCccceeEEEeee--CCeEEEec
Q psy952 161 DGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKH--IVISGQKVPHVFALTLF--EDHIYWTD 236 (573)
Q Consensus 161 dG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~--~l~~~~~~~~p~~ia~~--~~~lywtd 236 (573)
........+. ......|++|++++++++||+++. .|++++....... .++... ...|.+|++. +++||+++
T Consensus 211 ~t~~v~~~~~-~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~-~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 211 ETFTVEKQFK-FKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFR-DTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp TTTEEEEEEE-CCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCC-SSCEEEEEECTTTCCEEEEE
T ss_pred CCCeEEEEEe-cCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCC-CCceEEEEEcCCCCeEEEEc
Confidence 7443332221 222358999999999999999986 8999998754431 111111 3579999994 68999999
Q ss_pred ----CCCCceEEEeccCCcceEEEcccCCCceeeeeeec
Q psy952 237 ----WNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHP 271 (573)
Q Consensus 237 ----~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~ 271 (573)
+.+++|.+++.. |+....+..+ ..|.+|+.-|.
T Consensus 286 ~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~~~~ 322 (328)
T 3dsm_A 286 AIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCWKLE 322 (328)
T ss_dssp CTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEEECC
T ss_pred ccccccCCEEEEECCC-CCEEEEEEec-cCcceEEEecc
Confidence 788999999875 8777766543 36777665443
No 46
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.73 E-value=4e-19 Score=138.54 Aligned_cols=77 Identities=45% Similarity=1.013 Sum_probs=69.5
Q ss_pred CCCCCCceecCCCcccCCCcccCCCCCCCCCCCCCCCccCCcCCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCC
Q psy952 409 PCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELP 488 (573)
Q Consensus 409 ~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~~~C~~~~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~ 488 (573)
.|.++ +|+|.+|+|||..|+|||..||.|+|||.+ |....|.+++|+|. +++|||..|+|||+.||.|||||.+
T Consensus 2 ~C~~~-~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~--C~~~~C~~~~f~C~---~g~Ci~~~~~CDg~~DC~dgsDE~~ 75 (80)
T 2fcw_B 2 TCSQA-EFRCHDGKCISRQFVCDSDRDCLDGSDEAS--CPVLTCGPASFQCN---SSTCIPQLWACDNDPDCEDGSDEWP 75 (80)
T ss_dssp CCCTT-EEECTTSCEEEGGGTTSSSCCSTTCTTTTT--HHHHHCCTTEEECT---TSCEEEGGGTTSSSCCSTTCGGGCG
T ss_pred CCCCC-ccCCCCCCEEeeecccCCcccCCCcccccc--cccccCCceeeECC---CCCEEecccccCCCcCCCCCCCcCc
Confidence 46677 999999999999999999999999999987 77667999999998 6899999999999999999999955
Q ss_pred CCC
Q psy952 489 QNC 491 (573)
Q Consensus 489 ~~C 491 (573)
.+|
T Consensus 76 ~~C 78 (80)
T 2fcw_B 76 QRC 78 (80)
T ss_dssp GGC
T ss_pred ccC
Confidence 555
No 47
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.71 E-value=3e-15 Score=148.38 Aligned_cols=222 Identities=12% Similarity=0.119 Sum_probs=165.0
Q ss_pred CCEEEEEec--ccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcce
Q psy952 16 KPWLIFSNK--YYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEG 92 (573)
Q Consensus 16 ~~~l~~s~~--~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~g 92 (573)
...|+++.. +.|++++.++........ ....|.+|++|+ +++||+++...+.|++++.++......+......|.+
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEE
T ss_pred CCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCcee
Confidence 345666653 679999888543323222 346799999995 6789999988889999999854333223334578999
Q ss_pred eEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec
Q psy952 93 LAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH 171 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~ 171 (573)
|++|. .++||+++...+.|.+++++|....... .....|.+|++++ .|.||+++.. ...|.+.+.+|.......
T Consensus 151 i~~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~-- 225 (300)
T 2qc5_A 151 ITLGS-DNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIM-GNKIGRITTTGEISEYDI-- 225 (300)
T ss_dssp EEECT-TSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETT-TTEEEEECTTCCEEEEEC--
T ss_pred EEECC-CCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccC-CCEEEEEcCCCcEEEEEC--
Confidence 99996 4569999988889999999776654333 3566799999998 6799999854 567999999776544333
Q ss_pred CCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEec
Q psy952 172 EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 172 ~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~ 247 (573)
...+..|.+|++|+. ++||+++...+.|.+++.+|.......... ...|.+|++. ++.||+++. + .|.+++.
T Consensus 226 ~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 226 PTPNARPHAITAGKN-SEIWFTEWGANQIGRITNDNTIQEYQLQTE-NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp SSTTCCEEEEEECST-TCEEEEETTTTEEEEECTTSCEEEEECCST-TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCCCCceEEEECCC-CCEEEeccCCCeEEEECCCCcEEEEECCcc-CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 456778999999964 679999998899999999775443322222 5679999996 578999998 5 8888864
No 48
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=2.8e-15 Score=149.33 Aligned_cols=221 Identities=13% Similarity=0.140 Sum_probs=165.0
Q ss_pred cCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCe
Q psy952 32 LDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQ 111 (573)
Q Consensus 32 l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~ 111 (573)
..+..++.+...+..+.+++||+.++.|||++...+.|+++++++. ...+. .....|.+|++|+ .++||+++...+.
T Consensus 15 ~~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~-~~~~~~~~l~~~~-dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 15 PAGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM-HPSHHQNGHCLNK-QGHLIACSHGLRR 91 (296)
T ss_dssp CTTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE-SSCSSEEEEEECT-TCCEEEEETTTTE
T ss_pred CCCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE-CCCCCcceeeECC-CCcEEEEecCCCe
Confidence 3455667777778889999999988889999999999999999887 54443 3446899999997 5679999988889
Q ss_pred EEEEEc-CCCceeEecc-----CCCCcceEEEeCCCceEEEEecC----------------CcCeEEEEeccCCCcEEEE
Q psy952 112 LDVAEL-DGTNRKTLKT-----AIQDPRGITLHPGIGYVYFSSWN----------------LQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 112 I~~~~l-dg~~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~----------------~~~~I~r~~ldG~~~~~l~ 169 (573)
|.++++ +|.. +.+.. ....|++|+++| .|.||+++.. ....|++++.+|.. ..+.
T Consensus 92 i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~ 168 (296)
T 3e5z_A 92 LERQREPGGEW-ESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL-SAPI 168 (296)
T ss_dssp EEEECSTTCCE-EEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE-EEEE
T ss_pred EEEEcCCCCcE-EEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCCE-EEee
Confidence 999999 5554 33331 245689999999 7889998741 13489999888543 3333
Q ss_pred ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC--CCc---EEEEEeCCccceeEEEeee-CCeEEEecCCCCceE
Q psy952 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD--GKH---KHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSIN 243 (573)
Q Consensus 170 ~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d--G~~---~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~ 243 (573)
..+..|++|++++++..| |++...++|++++++ |.. .+++ ... ...|.+|+++ ++.||++. .+.|.
T Consensus 169 ---~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~--~~~v~ 240 (296)
T 3e5z_A 169 ---RDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVE-PGKTDGLRVDAGGLIWASA--GDGVH 240 (296)
T ss_dssp ---CCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEE--TTEEE
T ss_pred ---cCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCC-CCCCCeEEECCCCCEEEEc--CCeEE
Confidence 677889999999877777 999999999999985 433 3344 322 5678999996 57899888 67899
Q ss_pred EEeccCCcceEEEcccCCCceeeee
Q psy952 244 RADKFNGRDYRVLRNTTHRPYDIHV 268 (573)
Q Consensus 244 ~~~~~~g~~~~~l~~~~~~p~~i~v 268 (573)
++++ .|+....+..... |..++.
T Consensus 241 ~~~~-~g~~~~~~~~~~~-~~~~~f 263 (296)
T 3e5z_A 241 VLTP-DGDELGRVLTPQT-TSNLCF 263 (296)
T ss_dssp EECT-TSCEEEEEECSSC-CCEEEE
T ss_pred EECC-CCCEEEEEECCCC-ceeEEE
Confidence 9986 4665555543333 555543
No 49
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=1.1e-14 Score=144.08 Aligned_cols=226 Identities=12% Similarity=0.101 Sum_probs=162.9
Q ss_pred CCEEEEEe--cccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcce
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEG 92 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~g 92 (573)
...|+++. ...|+++++++........ ....|.+|++|+ +++||+++...+.|+++++++.............|.+
T Consensus 67 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 67 DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSF 145 (299)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEE
T ss_pred CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCce
Confidence 34556665 3578999887543222222 456799999996 6789999988889999998654433223334568999
Q ss_pred eEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec
Q psy952 93 LAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH 171 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~ 171 (573)
|++|. .++||+++...+.|.+++++|....... .....|.+|++++ .|.||+++.. ...|.+.+.+|.......
T Consensus 146 i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g~~~~~~~-- 220 (299)
T 2z2n_A 146 ITLGS-DNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGN-DDALWFVEII-GNKIGRITTSGEITEFKI-- 220 (299)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETT-TTEEEEECTTCCEEEEEC--
T ss_pred EEEcC-CCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECC-CCCEEEEccC-CceEEEECCCCcEEEEEC--
Confidence 99996 5689999988889999999666544323 4566799999998 4789999854 568999998665433222
Q ss_pred CCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCC
Q psy952 172 EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 172 ~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g 250 (573)
......|.+|++|+ +++||+++...+.|.+++.+|.......... ...|.+|++.++.||+++. .+.|.+++..++
T Consensus 221 ~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~-~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 221 PTPNARPHAITAGA-GIDLWFTEWGANKIGRLTSNNIIEEYPIQIK-SAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp SSTTCCEEEEEECS-TTCEEEEETTTTEEEEEETTTEEEEEECSSS-SCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred CCCCCCceeEEECC-CCCEEEeccCCceEEEECCCCceEEEeCCCC-CCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 34567899999995 4779999988899999999764332222222 5689999996678999976 578888875443
No 50
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.68 E-value=2.3e-15 Score=154.15 Aligned_cols=207 Identities=15% Similarity=0.096 Sum_probs=149.8
Q ss_pred CCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE-----cCCCCCcceeEEeec---CCcEEEE
Q psy952 34 ATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI-----RHDSHGLEGLAVDWV---GRKLYWL 105 (573)
Q Consensus 34 g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~-----~~~~~~p~glavD~~---~~~LY~t 105 (573)
....++++.++..|.+|++++ +++||+++.. ++|++++ +|. .+.+. ..+...|.|||+++. ++.||++
T Consensus 20 ~~~~~~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~i~-~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 20 GLRVEEVVGGLEVPWALAFLP-DGGMLIAERP-GRIRLFR-EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp CCCEEEEECCCSCEEEEEECT-TSCEEEEETT-TEEEEEE-TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CcEEEEEECCCCCceEEEEcC-CCeEEEEeCC-CeEEEEE-CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEE
Confidence 345667778899999999997 4679999986 8999998 654 23232 234678999999986 7899999
Q ss_pred eCCC-----CeEEEEEcCCC---ceeEecc-------CCCCcceEEEeCCCceEEEEecC------------CcCeEEEE
Q psy952 106 DRHS-----KQLDVAELDGT---NRKTLKT-------AIQDPRGITLHPGIGYVYFSSWN------------LQAYIGKI 158 (573)
Q Consensus 106 d~~~-----~~I~~~~ldg~---~~~~l~~-------~~~~P~~Iavdp~~g~LYwtd~~------------~~~~I~r~ 158 (573)
+... ++|.++++++. ..++++. ....|.+|+++| .|+||++... ...+|.|+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri 174 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRL 174 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEE
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEE
Confidence 8753 78999998864 2334432 123589999999 6799999732 12589999
Q ss_pred eccCC-------------CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCe--------EEEEeCCCC---------
Q psy952 159 GMDGS-------------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDY--------IASVDLDGK--------- 208 (573)
Q Consensus 159 ~ldG~-------------~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~--------I~~~~~dG~--------- 208 (573)
+.+|+ ..+++. ..+..|.||++|+.+++||++|.+.+. |.++...+.
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a---~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~ 251 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYS---LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGR 251 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEE---ECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSC
T ss_pred cCCCCCCCCCcccCCCCCCccEEE---EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCC
Confidence 99982 333443 578889999999888999999987765 555543220
Q ss_pred -----cEEEEEe-CCccceeEEEeeeCCeEEEecCCCCceEEEeccC
Q psy952 209 -----HKHIVIS-GQKVPHVFALTLFEDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 209 -----~~~~l~~-~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~ 249 (573)
....+.. .. ...|.||+++++.||++++..++|.++....
T Consensus 252 ~~~~~~~~p~~~~~~-~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~ 297 (352)
T 2ism_A 252 GNDPRYRDPLYFWPQ-GFPPGNLAFFRGDLYVAGLRGQALLRLVLEG 297 (352)
T ss_dssp CCCTTSCCCSEECTT-CCCEEEEEEETTEEEEEETTTTEEEEEEEEE
T ss_pred CCCCCCcCCeEecCC-CCCCcceEEECCEEEEEECCCCEEEEEEECC
Confidence 0001111 11 3469999999999999999999999987543
No 51
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.68 E-value=4.4e-15 Score=149.07 Aligned_cols=213 Identities=12% Similarity=0.034 Sum_probs=153.0
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCC--eEEEEEcCCCce
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSK--QLDVAELDGTNR 122 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~--~I~~~~ldg~~~ 122 (573)
..|.++++|+ +++|||+|...++|++++.++... .++..+ ..|.+|+++.. ++||+++...+ +|.+++......
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~-~~~~~~-~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-IHATVE-GKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-EEEECS-SEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE-EEEeCC-CCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeE
Confidence 5799999997 677999999999999999987543 333333 58999999965 56999996543 588887654444
Q ss_pred eEec--cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEE-Ee-------cCCCCCCCceEEEeccCCeEEE
Q psy952 123 KTLK--TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRI-LT-------HEDDIAWPNALTLDYFTERLYW 192 (573)
Q Consensus 123 ~~l~--~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l-~~-------~~~~l~~P~glaiD~~~~~LYw 192 (573)
+.+. .....|.++++.+ .+.+|+++.. ...|++++.++...++. .. ....+..|+|| ++++++||+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~-~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLS-DTQYLTADSY-RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEEECTTCSCEEEEEESS-SSEEEEEETT-TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEEeCCCccccCcccccC-CCcEEEEECC-CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 4443 3455688999865 6789999954 56899999875432222 10 02356789998 555889999
Q ss_pred EeCCCCeEEEEeCCC--C--cEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEE--EcccCCCcee
Q psy952 193 ADAHLDYIASVDLDG--K--HKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRV--LRNTTHRPYD 265 (573)
Q Consensus 193 ~D~~~~~I~~~~~dG--~--~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~--l~~~~~~p~~ 265 (573)
+|...++|.++++++ . .++++.. +..|.+|+++ ++.||++++..++|.+++. +|+...+ +......|.+
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~-~G~~~~~~~~~~~~~~p~~ 259 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAP-DRSTTIIAQAEQGVIGSTA 259 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECT-TCCEEEEECGGGTCTTEEE
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECC-CCCEEEEeecccccCCceE
Confidence 999999999999985 2 2344443 3579999996 5789999999999999985 4654332 2233456777
Q ss_pred eeee
Q psy952 266 IHVY 269 (573)
Q Consensus 266 i~v~ 269 (573)
+++-
T Consensus 260 ~a~~ 263 (306)
T 2p4o_A 260 VAFG 263 (306)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6653
No 52
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.66 E-value=1.7e-14 Score=144.53 Aligned_cols=212 Identities=14% Similarity=0.179 Sum_probs=157.1
Q ss_pred CCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeE
Q psy952 33 DATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQL 112 (573)
Q Consensus 33 ~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I 112 (573)
.+..++.+..++..+.+++|++.++.|||++...+.|++++.+|. .+.+.. ....|.+|++|+ .++||+++...+.|
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~-~~~~~~gl~~d~-dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLD-ATAFTNGNAVDA-QQRLVHCEHGRRAI 109 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEE-SCSCEEEEEECT-TSCEEEEETTTTEE
T ss_pred CCCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeC-CCCccceeeECC-CCCEEEEECCCCEE
Confidence 355667777888889999999988999999999999999998654 333333 346899999997 46799999888899
Q ss_pred EEEEcCCCceeEecc-----CCCCcceEEEeCCCceEEEEec--CC--------------cCeEEEEeccCCCcEEEEec
Q psy952 113 DVAELDGTNRKTLKT-----AIQDPRGITLHPGIGYVYFSSW--NL--------------QAYIGKIGMDGSNFTRILTH 171 (573)
Q Consensus 113 ~~~~ldg~~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~--~~--------------~~~I~r~~ldG~~~~~l~~~ 171 (573)
.+++++|.. +++.. .+..|++|++++ .|.||+||. +. ...|++++.++...+.+
T Consensus 110 ~~~~~~g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~--- 184 (305)
T 3dr2_A 110 TRSDADGQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM--- 184 (305)
T ss_dssp EEECTTSCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE---
T ss_pred EEECCCCCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE---
Confidence 999998764 33332 345699999999 788999873 11 25799998854333332
Q ss_pred CCCCCCCceEEEeccCCeEEEEeCCC-----CeEEEEeCCCCc---EEEEEeCCccceeEEEeee-CCeEEEecCCCCce
Q psy952 172 EDDIAWPNALTLDYFTERLYWADAHL-----DYIASVDLDGKH---KHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSI 242 (573)
Q Consensus 172 ~~~l~~P~glaiD~~~~~LYw~D~~~-----~~I~~~~~dG~~---~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I 242 (573)
. .+..|+||++++++..|||++... +.|+++++++.. .+++.... ...|.+|+++ ++.||++. .+.|
T Consensus 185 ~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~-~~~pdgi~~d~~G~lwv~~--~~gv 260 (305)
T 3dr2_A 185 A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP-DGLPDGFCVDRGGWLWSSS--GTGV 260 (305)
T ss_dssp E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS-SSCCCSEEECTTSCEEECC--SSEE
T ss_pred e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC-CCCCCeEEECCCCCEEEec--CCcE
Confidence 2 567899999999888999999874 789999887643 23333322 4578999996 56788777 3469
Q ss_pred EEEeccCCcceEEEc
Q psy952 243 NRADKFNGRDYRVLR 257 (573)
Q Consensus 243 ~~~~~~~g~~~~~l~ 257 (573)
.++++ +|+....+.
T Consensus 261 ~~~~~-~g~~~~~~~ 274 (305)
T 3dr2_A 261 CVFDS-DGQLLGHIP 274 (305)
T ss_dssp EEECT-TSCEEEEEE
T ss_pred EEECC-CCCEEEEEE
Confidence 88886 566555443
No 53
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.65 E-value=6.8e-14 Score=140.31 Aligned_cols=213 Identities=13% Similarity=0.087 Sum_probs=151.9
Q ss_pred CCEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCC--CeEEEEEcCCCcceEEEc-CCCCCc
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAA--KTIYRSRVGSTEKERVIR-HDSHGL 90 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~i~~-~~~~~p 90 (573)
...|++++ .+.|++++.++.... .......|.+|++++. ++||+++... .+|++++......+.+.. .....+
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~-~~~~~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~ 119 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQI-HATVEGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFL 119 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEE-EEECSSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCE
T ss_pred CCCEEEEeCCCCeEEEECCCCceEE-EEeCCCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcccc
Confidence 34577776 578999998875433 3333457999999975 5699999654 358888865554544443 234578
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEe-----------ccCCCCcceEEEeCCCceEEEEecCCcCeEEEEe
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTL-----------KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIG 159 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l-----------~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ 159 (573)
.|+++ |..+++|++|...++|+++++++...++. ...+..|+|| ++..++||+++.. ..+|.+++
T Consensus 120 ~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~-~~~I~~~~ 195 (306)
T 2p4o_A 120 NGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE-KMLLLRIP 195 (306)
T ss_dssp EEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-TTEEEEEE
T ss_pred Ccccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-CCEEEEEE
Confidence 88886 56788999998889999999875422221 1345679998 6667899999965 67899999
Q ss_pred ccC--C--CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-----CC
Q psy952 160 MDG--S--NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-----ED 230 (573)
Q Consensus 160 ldG--~--~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-----~~ 230 (573)
+++ . .++++. .+..|.||++|+ +++||+++...++|.+++.+|....+......+..|.++++. ++
T Consensus 196 ~~~~g~~~~~~~~~----~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 196 VDSTDKPGEPEIFV----EQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp BCTTSCBCCCEEEE----ESCCCSSEEEBT-TCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTT
T ss_pred eCCCCCCCccEEEe----ccCCCCCeEECC-CCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCC
Confidence 985 2 234444 246899999995 568999999999999999987543321111115689999985 36
Q ss_pred eEEEecCCC
Q psy952 231 HIYWTDWNT 239 (573)
Q Consensus 231 ~lywtd~~~ 239 (573)
.||+++...
T Consensus 271 ~LyVt~~~~ 279 (306)
T 2p4o_A 271 AIYVVTNGG 279 (306)
T ss_dssp EEEEEECTT
T ss_pred EEEEECCCC
Confidence 899998753
No 54
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.64 E-value=2.5e-14 Score=146.43 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=151.1
Q ss_pred CceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE-----cCCCCCcceeEEeec---CCcEEEEe
Q psy952 35 TQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI-----RHDSHGLEGLAVDWV---GRKLYWLD 106 (573)
Q Consensus 35 ~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~-----~~~~~~p~glavD~~---~~~LY~td 106 (573)
-..++++.++..|.+|++++ +++||+++.. ++|++++.+|. +.+. ..+...|.|||+++. ++.||+++
T Consensus 19 ~~~~~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLG-GGRYLVTERP-GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEE-TTEEEEEETT-TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred eEEEEEeCCCCCCeEEEEcC-CCeEEEEeCC-CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 34566777889999999997 6789999987 89999976665 3332 234568999999987 78999998
Q ss_pred CC---C----CeEEEEEcCCC-----ceeEecc-----CCCCcceEEEeCCCceEEEEecC------------CcCeEEE
Q psy952 107 RH---S----KQLDVAELDGT-----NRKTLKT-----AIQDPRGITLHPGIGYVYFSSWN------------LQAYIGK 157 (573)
Q Consensus 107 ~~---~----~~I~~~~ldg~-----~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~------------~~~~I~r 157 (573)
.. . ++|.++++++. ..++|+. ....|.+|+++| .|+||++... ...+|.|
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~r 173 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILR 173 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEE
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEE
Confidence 63 3 68999998875 2344432 234589999999 6799999632 1358999
Q ss_pred EeccCC--------CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCe---EEEEeCCCCc---------------EE
Q psy952 158 IGMDGS--------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDY---IASVDLDGKH---------------KH 211 (573)
Q Consensus 158 ~~ldG~--------~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~---I~~~~~dG~~---------------~~ 211 (573)
++.||+ ..+++. ..+..|.||++|+.+++||++|.+.+. |..+.. |.+ ..
T Consensus 174 i~~dG~~p~~npf~~~~i~a---~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~ 249 (354)
T 3a9g_A 174 VDEEGRPPADNPFPNSPIWS---YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVD 249 (354)
T ss_dssp ECTTSCCCTTSSSTTCCEEE---ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCC
T ss_pred EcCCCCCCCCCCCCCCcEEE---EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcC
Confidence 999997 334444 678999999999888999999988754 555543 221 01
Q ss_pred EEEe-CCccceeEEEee--------eCCeEEEecCCCCceEEEeccC
Q psy952 212 IVIS-GQKVPHVFALTL--------FEDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 212 ~l~~-~~~~~~p~~ia~--------~~~~lywtd~~~~~I~~~~~~~ 249 (573)
.+.. ......|.||++ +.+.||++++..++|.++....
T Consensus 250 p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 250 PVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred CEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 1111 011346999999 5789999999999999998543
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.61 E-value=8.6e-13 Score=133.76 Aligned_cols=246 Identities=11% Similarity=0.098 Sum_probs=175.7
Q ss_pred CEEEEEe--------cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC-C
Q psy952 17 PWLIFSN--------KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD-S 87 (573)
Q Consensus 17 ~~l~~s~--------~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~-~ 87 (573)
.+|+++. ...|+++++.+......+.....+.++++++.+++||+++...+.|+.+++.+......+..+ .
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 132 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDR 132 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCC
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCC
Confidence 4667666 347888988766544333334558899999999999999998899999999765543333322 1
Q ss_pred C--------CcceeEEeecCCcEEEEeC-CCCeEEEEEcCCCceeEecc-CCCCcceEEEeCCCceEEEEecCCcCeEEE
Q psy952 88 H--------GLEGLAVDWVGRKLYWLDR-HSKQLDVAELDGTNRKTLKT-AIQDPRGITLHPGIGYVYFSSWNLQAYIGK 157 (573)
Q Consensus 88 ~--------~p~glavD~~~~~LY~td~-~~~~I~~~~ldg~~~~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r 157 (573)
. .|.++++++.++.||+++. ..+.|.++++........+. ....|.+++++|..++||+++. ...|.+
T Consensus 133 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~i~~ 210 (353)
T 3vgz_A 133 KRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA--DGELIT 210 (353)
T ss_dssp CCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT--TSEEEE
T ss_pred ccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC--CCeEEE
Confidence 1 2789999998999999984 56789999997655544444 4456999999999899999984 567888
Q ss_pred EeccCCCcEEEEecC--CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEE
Q psy952 158 IGMDGSNFTRILTHE--DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIY 233 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~--~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~ly 233 (573)
.++........+... .....|.++++++.+++||+++...+.|..+++........+. +..|.++++ .+++||
T Consensus 211 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~s~dg~~l~ 287 (353)
T 3vgz_A 211 IDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA---APESLAVLFNPARNEAY 287 (353)
T ss_dssp EETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE---CSSCCCEEEETTTTEEE
T ss_pred EECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE---cCCCceEEECCCCCEEE
Confidence 887654433333100 1234567899999999999999988999999996554433333 234566776 456799
Q ss_pred EecCCCCceEEEeccCCcceEEEcccCCCceeeee
Q psy952 234 WTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHV 268 (573)
Q Consensus 234 wtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v 268 (573)
+++...+.|..++..+++....+... ..|.++++
T Consensus 288 v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~ 321 (353)
T 3vgz_A 288 VTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLAL 321 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEE
T ss_pred EEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEE
Confidence 99999999999998777766555432 24555544
No 56
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.61 E-value=9.1e-14 Score=142.29 Aligned_cols=217 Identities=16% Similarity=0.197 Sum_probs=150.3
Q ss_pred CCEEEEEec-ccEEEEEcCCCcee-----ecccCCcceEEEEEEcC---CCEEEEEECCC-----CeEEEEEcCCC---c
Q psy952 16 KPWLIFSNK-YYVRNMSLDATQYS-----LVHQDLLNVVAMDFHYK---ENRFYFADVAA-----KTIYRSRVGST---E 78 (573)
Q Consensus 16 ~~~l~~s~~-~~I~~i~l~g~~~~-----~~~~~~~~~~~v~~d~~---~~~ly~~d~~~-----~~I~~~~~~g~---~ 78 (573)
..-|+++.. ..|++++ ++.... +...+...|.+|++++. ++.||+++... .+|.|+++++. .
T Consensus 41 dG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~ 119 (352)
T 2ism_A 41 DGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVL 119 (352)
T ss_dssp TSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEE
T ss_pred CCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCc
Confidence 344666664 6788888 554211 11234567999999987 78999998754 78999998864 2
Q ss_pred ceEEEc------CCCCCcceeEEeecCCcEEEEeCC-------------CCeEEEEEcCCC-------------ceeEec
Q psy952 79 KERVIR------HDSHGLEGLAVDWVGRKLYWLDRH-------------SKQLDVAELDGT-------------NRKTLK 126 (573)
Q Consensus 79 ~~~i~~------~~~~~p~glavD~~~~~LY~td~~-------------~~~I~~~~ldg~-------------~~~~l~ 126 (573)
.++++. ...+.|.+|++++ .++||+++.. .++|.+++.+|+ ..+++.
T Consensus 120 ~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a 198 (352)
T 2ism_A 120 DRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS 198 (352)
T ss_dssp EEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE
T ss_pred eEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE
Confidence 333332 2346789999997 4599999732 368999999983 344555
Q ss_pred cCCCCcceEEEeCCCceEEEEecCCcC-------eEEEEeccCC--------------CcEEEEecCCCCCCCceEEEec
Q psy952 127 TAIQDPRGITLHPGIGYVYFSSWNLQA-------YIGKIGMDGS--------------NFTRILTHEDDIAWPNALTLDY 185 (573)
Q Consensus 127 ~~~~~P~~Iavdp~~g~LYwtd~~~~~-------~I~r~~ldG~--------------~~~~l~~~~~~l~~P~glaiD~ 185 (573)
.++.+|.+|++||..|.||+++.+... .|.++...+. ....+.. ......|.||++
T Consensus 199 ~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~-~~~~~ap~G~~~-- 275 (352)
T 2ism_A 199 LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF-WPQGFPPGNLAF-- 275 (352)
T ss_dssp ECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE-CTTCCCEEEEEE--
T ss_pred EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe-cCCCCCCcceEE--
Confidence 688899999999988999999976433 3666544320 0011111 122346889999
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCCc-------EEEEEeCCccceeEEEeee-CCeEEEecCCC
Q psy952 186 FTERLYWADAHLDYIASVDLDGKH-------KHIVISGQKVPHVFALTLF-EDHIYWTDWNT 239 (573)
Q Consensus 186 ~~~~LYw~D~~~~~I~~~~~dG~~-------~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~ 239 (573)
..+.||+++...++|.++++++.. ...++. . ..+|.+|++. ++.||++++..
T Consensus 276 ~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~-~~rp~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 276 FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-G-FGRLREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-S-SCCEEEEEECTTSCEEEEECST
T ss_pred ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-c-CCCeeEEEECCCCcEEEEEeCC
Confidence 378999999999999999987543 223333 2 5689999995 57899998764
No 57
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=6.2e-13 Score=134.71 Aligned_cols=232 Identities=13% Similarity=0.056 Sum_probs=163.1
Q ss_pred cccEEEEEcCCCceeecc------cCC-cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEe
Q psy952 24 KYYVRNMSLDATQYSLVH------QDL-LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVD 96 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~------~~~-~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD 96 (573)
...|..+++...++...+ ..+ ..+.+|+++ .++||++....+.|.++++........+. ....|.+|+++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 358999999865543211 122 347889887 78999999988999999997654432233 35799999997
Q ss_pred ecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCC------CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 97 WVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQ------DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 97 ~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~------~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
+. ++||+++...+.|.++++........+.... .|.+|+++ .+.||+++++....|.++++........+
T Consensus 93 ~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i- 168 (328)
T 3dsm_A 93 SD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDEL- 168 (328)
T ss_dssp ET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEE-
T ss_pred CC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEE-
Confidence 65 5999999777899999997655443333223 79999994 78999999854678999988754433333
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCC----------CeEEEEeCCCCcEE-EEEeCCccceeEEEeee--CCeEEEecC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHL----------DYIASVDLDGKHKH-IVISGQKVPHVFALTLF--EDHIYWTDW 237 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~----------~~I~~~~~dG~~~~-~l~~~~~~~~p~~ia~~--~~~lywtd~ 237 (573)
.....|.+|++++ +++||++..+. +.|.+++....... .+.... -.+|.+|++. +++||+++.
T Consensus 169 --~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 169 --TIGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp --ECSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESS
T ss_pred --EcCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEcc
Confidence 2245799999995 57899998875 78999998755443 332221 2379999996 678999986
Q ss_pred CCCceEEEeccCCcceE--EEcccCCCceeeeee
Q psy952 238 NTKSINRADKFNGRDYR--VLRNTTHRPYDIHVY 269 (573)
Q Consensus 238 ~~~~I~~~~~~~g~~~~--~l~~~~~~p~~i~v~ 269 (573)
.|++++..+++... .+......|.+|++-
T Consensus 245 ---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 245 ---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp ---SEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred ---EEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 89999977766421 111113568777663
No 58
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=3.7e-13 Score=135.98 Aligned_cols=212 Identities=13% Similarity=0.162 Sum_probs=156.3
Q ss_pred eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCC----CeEE
Q psy952 38 SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHS----KQLD 113 (573)
Q Consensus 38 ~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~----~~I~ 113 (573)
..+......+.+++|++ +++|||++...+.|+++++++.....+.......|.+|++|+ .++||++.... +.|.
T Consensus 38 ~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEE
T ss_pred EEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEE
Confidence 33444556789999995 567999999889999999987665555433346899999996 46799998765 6899
Q ss_pred EEEcCCCceeEecc---CCCCcceEEEeCCCceEEEEecCC-----cCeEEEEeccCCCcEEEEecCCCCCCCceEEEec
Q psy952 114 VAELDGTNRKTLKT---AIQDPRGITLHPGIGYVYFSSWNL-----QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDY 185 (573)
Q Consensus 114 ~~~ldg~~~~~l~~---~~~~P~~Iavdp~~g~LYwtd~~~-----~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~ 185 (573)
++++++...+.++. ....|.+|+++| .|.||+++... ...|++++.++...+.+. ..+..|++|++++
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII---QNISVANGIALST 191 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE---EEESSEEEEEECT
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEee---cCCCcccceEECC
Confidence 99998876654432 334699999999 67899988531 357999988876555554 3456799999998
Q ss_pred cCCeEEEEeCCCCeEEEEeC--CCCcEEEE-----EeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 186 FTERLYWADAHLDYIASVDL--DGKHKHIV-----ISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 186 ~~~~LYw~D~~~~~I~~~~~--dG~~~~~l-----~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
.+++||+++...+.|.++++ +|.....+ ........|.+|++. ++.||+++...+.|.+++. +|+....+
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 87889999988889999998 45433221 111102479999996 5789999988889999986 56555544
No 59
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=2e-13 Score=136.41 Aligned_cols=224 Identities=17% Similarity=0.207 Sum_probs=161.2
Q ss_pred eeecccCCcceEEEEEEcCCCEEEEE-------ECCCCeEEEEEcCCCcceEEEcC----CCCCcceeEEeecCCcEEEE
Q psy952 37 YSLVHQDLLNVVAMDFHYKENRFYFA-------DVAAKTIYRSRVGSTEKERVIRH----DSHGLEGLAVDWVGRKLYWL 105 (573)
Q Consensus 37 ~~~~~~~~~~~~~v~~d~~~~~ly~~-------d~~~~~I~~~~~~g~~~~~i~~~----~~~~p~glavD~~~~~LY~t 105 (573)
+..+..++..|.+++|| .++.|||+ +...+.|+++++.+.....+... ....|.+|++|+.+++||++
T Consensus 10 ~~~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp CEEEECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE
T ss_pred HhhhhccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE
Confidence 34456678889999999 57799999 77778999999765554444321 22579999999765899999
Q ss_pred eCCCCeEEEEEcCCCceeEe-cc-----CCCCcceEEEeCCCceEEEEecCC--------------cCeEEEEeccCCCc
Q psy952 106 DRHSKQLDVAELDGTNRKTL-KT-----AIQDPRGITLHPGIGYVYFSSWNL--------------QAYIGKIGMDGSNF 165 (573)
Q Consensus 106 d~~~~~I~~~~ldg~~~~~l-~~-----~~~~P~~Iavdp~~g~LYwtd~~~--------------~~~I~r~~ldG~~~ 165 (573)
+... .|.+++++|.. +.+ .. ....|++|++|+ .|.||+++... ...|++.+.+|..
T Consensus 89 ~~~~-~l~~~d~~g~~-~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~- 164 (314)
T 1pjx_A 89 DMRL-GLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM- 164 (314)
T ss_dssp ETTT-EEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE-
T ss_pred ECCC-CEEEEeCCCCE-EEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCE-
Confidence 8744 79999998544 344 32 234599999999 67899998543 1579999888543
Q ss_pred EEEEecCCCCCCCceEEEe----ccCCeEEEEeCCCCeEEEEeCC--CCc--EEEEEe-CCcc-ceeEEEeee-CCeEEE
Q psy952 166 TRILTHEDDIAWPNALTLD----YFTERLYWADAHLDYIASVDLD--GKH--KHIVIS-GQKV-PHVFALTLF-EDHIYW 234 (573)
Q Consensus 166 ~~l~~~~~~l~~P~glaiD----~~~~~LYw~D~~~~~I~~~~~d--G~~--~~~l~~-~~~~-~~p~~ia~~-~~~lyw 234 (573)
..+. ..+..|++|+++ +.++.||+++...++|.+++++ |.. .+.+.. .... ..|.+|++. ++.||+
T Consensus 165 ~~~~---~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v 241 (314)
T 1pjx_A 165 IQVD---TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV 241 (314)
T ss_dssp EEEE---EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE
T ss_pred EEec---cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE
Confidence 3333 345679999999 8777999999999999999876 321 122222 1112 579999996 578999
Q ss_pred ecCCCCceEEEeccCCcceEEEcccCCCceeeee
Q psy952 235 TDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHV 268 (573)
Q Consensus 235 td~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v 268 (573)
+++..+.|.+++..+|+....+......|.+|++
T Consensus 242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~ 275 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF 275 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEE
T ss_pred EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEE
Confidence 9988899999987667666555443456666665
No 60
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.59 E-value=3.7e-13 Score=137.72 Aligned_cols=226 Identities=12% Similarity=0.142 Sum_probs=157.6
Q ss_pred CEEEEEec-ccEEEEEcCCCceeec-----ccCCcceEEEEEEcC---CCEEEEEECC---C----CeEEEEEcCCC---
Q psy952 17 PWLIFSNK-YYVRNMSLDATQYSLV-----HQDLLNVVAMDFHYK---ENRFYFADVA---A----KTIYRSRVGST--- 77 (573)
Q Consensus 17 ~~l~~s~~-~~I~~i~l~g~~~~~~-----~~~~~~~~~v~~d~~---~~~ly~~d~~---~----~~I~~~~~~g~--- 77 (573)
.-|+++.. ..|++++.+|. ..+. ..+...+.+|++++. ++.||+++.. . .+|.|+++++.
T Consensus 40 G~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~ 118 (354)
T 3a9g_A 40 GRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFK 118 (354)
T ss_dssp TEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCC
T ss_pred CeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcC
Confidence 45666664 67888876665 2111 234567999999987 8999999863 3 68999998765
Q ss_pred --cceEEEc----CCCCCcceeEEeecCCcEEEEeCC-------------CCeEEEEEcCCC--------ceeEeccCCC
Q psy952 78 --EKERVIR----HDSHGLEGLAVDWVGRKLYWLDRH-------------SKQLDVAELDGT--------NRKTLKTAIQ 130 (573)
Q Consensus 78 --~~~~i~~----~~~~~p~glavD~~~~~LY~td~~-------------~~~I~~~~ldg~--------~~~~l~~~~~ 130 (573)
..++++. ...+.+.+|++++ .++||++... .++|.+++.+|+ ..+++..++.
T Consensus 119 ~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r 197 (354)
T 3a9g_A 119 LKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR 197 (354)
T ss_dssp EEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS
T ss_pred cCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC
Confidence 2333332 2346789999997 5689999632 368999999997 3456667899
Q ss_pred CcceEEEeCCCceEEEEecCCc--CeEEEEeccCCC---------------cEEEEecCCCCCCCceEEE-------ecc
Q psy952 131 DPRGITLHPGIGYVYFSSWNLQ--AYIGKIGMDGSN---------------FTRILTHEDDIAWPNALTL-------DYF 186 (573)
Q Consensus 131 ~P~~Iavdp~~g~LYwtd~~~~--~~I~r~~ldG~~---------------~~~l~~~~~~l~~P~glai-------D~~ 186 (573)
+|.+|++||..|.||+++.+.. ..|.++.. |.+ ...+.........|.||++ + .
T Consensus 198 np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~-~ 275 (354)
T 3a9g_A 198 NPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG-L 275 (354)
T ss_dssp CCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG-G
T ss_pred CcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc-c
Confidence 9999999998899999997642 34665543 221 0111110123346899999 4 5
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCc-E---EEEEeCCccceeEEEeee-CCeEEEecCC-CC---------ceEEEec
Q psy952 187 TERLYWADAHLDYIASVDLDGKH-K---HIVISGQKVPHVFALTLF-EDHIYWTDWN-TK---------SINRADK 247 (573)
Q Consensus 187 ~~~LYw~D~~~~~I~~~~~dG~~-~---~~l~~~~~~~~p~~ia~~-~~~lywtd~~-~~---------~I~~~~~ 247 (573)
.+.||+++...++|.++++++.. . +.++.+. ...|.+|++. ++.||++++. .+ +|+|+..
T Consensus 276 ~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 276 RGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp TTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred CCcEEEEEcCCCEEEEEEECCCCcccceeeeccCC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 68999999999999999998542 2 2333332 5689999985 5689999874 44 7888753
No 61
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=4.2e-13 Score=133.85 Aligned_cols=214 Identities=13% Similarity=0.054 Sum_probs=153.6
Q ss_pred CCEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC----CCCC
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH----DSHG 89 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~----~~~~ 89 (573)
...|++++ ...|+++++++...... .....+.+|++++..+ ||++. ...|+++++++...+.+... ....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 99 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSAVVLATVDNDKKNNR 99 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCC
Confidence 35677776 46899999987655433 2235688999997554 77775 46899999987665555432 2356
Q ss_pred cceeEEeecCCcEEEEeC-----------CCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEE
Q psy952 90 LEGLAVDWVGRKLYWLDR-----------HSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKI 158 (573)
Q Consensus 90 p~glavD~~~~~LY~td~-----------~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~ 158 (573)
|.+|++|+ .++||+++. ..+.|++++.+|.. ..+...+..|++|+++|....|||++.. ..+|++.
T Consensus 100 ~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv~~~~-~~~i~~~ 176 (297)
T 3g4e_A 100 FNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYYIDSL-SYSVDAF 176 (297)
T ss_dssp EEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEEEEGG-GTEEEEE
T ss_pred CCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEEecCC-CCcEEEE
Confidence 88999997 456999873 33578888887654 3455677789999999988899999954 5689998
Q ss_pred ecc---CCC--cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeCCccceeEEEeeeC---
Q psy952 159 GMD---GSN--FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKVPHVFALTLFE--- 229 (573)
Q Consensus 159 ~ld---G~~--~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~~~~~~p~~ia~~~--- 229 (573)
+++ |.. ++++.........|.||++|+ +++||++....++|.+++.+ |.....+... ...|.++++.+
T Consensus 177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p--~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLP--VDKTTSCCFGGKNY 253 (297)
T ss_dssp EECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECS--SSBEEEEEEESGGG
T ss_pred eccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECC--CCCceEEEEeCCCC
Confidence 875 321 233442112235799999995 56999999988999999998 6655555433 35899999853
Q ss_pred CeEEEecCCC
Q psy952 230 DHIYWTDWNT 239 (573)
Q Consensus 230 ~~lywtd~~~ 239 (573)
+.||+|....
T Consensus 254 ~~L~vt~~~~ 263 (297)
T 3g4e_A 254 SEMYVTCARD 263 (297)
T ss_dssp CEEEEEEBCT
T ss_pred CEEEEEcCCc
Confidence 5899997653
No 62
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=3.3e-13 Score=137.66 Aligned_cols=209 Identities=13% Similarity=0.160 Sum_probs=147.1
Q ss_pred cEEEEEcCCCceeec------ccCCcceEEEEEEcCCCEEEEEECC-----CCeEEEEEcCCCc-ceEEEcC-C----CC
Q psy952 26 YVRNMSLDATQYSLV------HQDLLNVVAMDFHYKENRFYFADVA-----AKTIYRSRVGSTE-KERVIRH-D----SH 88 (573)
Q Consensus 26 ~I~~i~l~g~~~~~~------~~~~~~~~~v~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~-~~~i~~~-~----~~ 88 (573)
.|..++ ++.....+ ...+..|.+|++|+. ++|||+|.. ..+|+++++++.. ...+... . ..
T Consensus 43 ~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~ 120 (343)
T 2qe8_A 43 QVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNS 120 (343)
T ss_dssp SEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTC
T ss_pred EEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhccccc
Confidence 577777 54321111 124567999999974 889999986 5799999997544 3333221 1 23
Q ss_pred CcceeEEeecCCcEEEEeC---CCCeEEEEEcC-CCceeEecc--------------C---------------CCCcceE
Q psy952 89 GLEGLAVDWVGRKLYWLDR---HSKQLDVAELD-GTNRKTLKT--------------A---------------IQDPRGI 135 (573)
Q Consensus 89 ~p~glavD~~~~~LY~td~---~~~~I~~~~ld-g~~~~~l~~--------------~---------------~~~P~~I 135 (573)
.|.+|+||..++.+|++|. ..+.|.++++. |...+++.. + ...|.||
T Consensus 121 ~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gi 200 (343)
T 2qe8_A 121 FVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGI 200 (343)
T ss_dssp CCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEE
T ss_pred ccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceeccccee
Confidence 6799999987889999998 78899999986 443333311 0 0247999
Q ss_pred EEeCCCceEEEEecCCcCeEEEEecc----CCC--------cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEE
Q psy952 136 TLHPGIGYVYFSSWNLQAYIGKIGMD----GSN--------FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASV 203 (573)
Q Consensus 136 avdp~~g~LYwtd~~~~~~I~r~~ld----G~~--------~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~ 203 (573)
|++|..+.||+++.. ..+|++++.+ +.. ...+. ....|.||++|+ +++||++++..++|.++
T Consensus 201 a~s~dg~~ly~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g----~~g~pdgia~d~-~G~l~va~~~~~~V~~~ 274 (343)
T 2qe8_A 201 VLDAENEWLYLSPMH-STSMYRIKSADLSNLQLTDAELGSKIERYS----EKPICDGISIDK-DHNIYVGDLAHSAIGVI 274 (343)
T ss_dssp EECTTSCEEEEEESS-CSEEEEEEHHHHTCTTCCHHHHHTTCEEEE----ECCSCSCEEECT-TCCEEEEEGGGTEEEEE
T ss_pred EeccCCCEEEEEeCC-CCeEEEEEHHHhcCCCCChhhhhcceEecc----cCCCCceEEECC-CCCEEEEccCCCeEEEE
Confidence 999988899999964 4589988753 210 11111 234799999996 58999999999999999
Q ss_pred eC-CCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceE
Q psy952 204 DL-DGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSIN 243 (573)
Q Consensus 204 ~~-dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~ 243 (573)
+. +|. ..++.....+..|.+|++. ++.||+++...+++.
T Consensus 275 d~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 275 TSADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSA 315 (343)
T ss_dssp ETTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSG
T ss_pred ECCCCC-EEEEEECCceecCCeeEECCCCcEEEEeCcccccc
Confidence 99 775 4444443236789999995 578999987766553
No 63
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.56 E-value=2.5e-12 Score=124.28 Aligned_cols=203 Identities=10% Similarity=0.055 Sum_probs=149.0
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-e
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-K 123 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~ 123 (573)
.++.||+|++.+++||.+....+.|+++++.|.....+...+...++|||++. .+.+|+++...++|.++.++.... .
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeee
Confidence 57999999999999999777788999999997766666556678999999984 566778888888999888764332 1
Q ss_pred ---EeccCC-CC-----cceEEEeCCCceEEEEecCCcCeEEEEe--ccCCCcEEEEe----cCCCCCCCceEEEeccCC
Q psy952 124 ---TLKTAI-QD-----PRGITLHPGIGYVYFSSWNLQAYIGKIG--MDGSNFTRILT----HEDDIAWPNALTLDYFTE 188 (573)
Q Consensus 124 ---~l~~~~-~~-----P~~Iavdp~~g~LYwtd~~~~~~I~r~~--ldG~~~~~l~~----~~~~l~~P~glaiD~~~~ 188 (573)
.+--.+ .. ..|||+||..+.||++.......|++.+ +.+....++.. ....+..+.+|++|+..+
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 111122 23 4899999998899998755444788876 22222333321 022466789999999999
Q ss_pred eEEEEeCCCCeEEEEeCCCCcEEEEEeC-C------ccceeEEEeee-CCeEEEecCCCCceEEEeccC
Q psy952 189 RLYWADAHLDYIASVDLDGKHKHIVISG-Q------KVPHVFALTLF-EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 189 ~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~------~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~ 249 (573)
+||+.....+.|..++.+|..+..+.-. . .+++|-|||++ ++.||++.-. +.++++.+..
T Consensus 186 ~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~~ 253 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQS 253 (255)
T ss_dssp EEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC--
T ss_pred eEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEecC
Confidence 9999999999999999999855544322 1 15799999995 5789999544 6888887644
No 64
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.56 E-value=1.4e-13 Score=141.01 Aligned_cols=212 Identities=10% Similarity=0.134 Sum_probs=147.6
Q ss_pred CCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEE------EcCCCCCcceeEEeec---CCcEE
Q psy952 33 DATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERV------IRHDSHGLEGLAVDWV---GRKLY 103 (573)
Q Consensus 33 ~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i------~~~~~~~p~glavD~~---~~~LY 103 (573)
++-..++++..+..|.+|++++....||+++.. ++|++++.+|...+.+ ...+...|.+||+++. ++.||
T Consensus 6 ~g~~~~~va~~l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lY 84 (353)
T 2g8s_A 6 ATVNVEVLQDKLDHPWALAFLPDNHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIW 84 (353)
T ss_dssp CCSEEEEEEEEESSEEEEEECSTTCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEE
T ss_pred CCcEEEEEECCCCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEE
Confidence 344556667778899999999754339999974 7999998776432211 2233457899999985 79999
Q ss_pred EEeCC-------CCeEEEEEcCCC-----ceeEeccC-------CCCcceEEEeCCCceEEEEecCC------------c
Q psy952 104 WLDRH-------SKQLDVAELDGT-----NRKTLKTA-------IQDPRGITLHPGIGYVYFSSWNL------------Q 152 (573)
Q Consensus 104 ~td~~-------~~~I~~~~ldg~-----~~~~l~~~-------~~~P~~Iavdp~~g~LYwtd~~~------------~ 152 (573)
+++.. ..+|.++++++. ..++++.. ...|.+|+++| .|+||++.... .
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~ 163 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQ 163 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCT
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCC
Confidence 99754 357988888643 33444432 23489999999 67999997321 3
Q ss_pred CeEEEEeccCC-------------CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC---eEEEEeCCCCc-------
Q psy952 153 AYIGKIGMDGS-------------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD---YIASVDLDGKH------- 209 (573)
Q Consensus 153 ~~I~r~~ldG~-------------~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~---~I~~~~~dG~~------- 209 (573)
.+|.|++.||+ ..+++. ..+..|.||++|+..++||++|.+.+ .|.++...+.-
T Consensus 164 g~I~ri~~dG~~p~~npf~~~~~~~~~i~a---~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~ 240 (353)
T 2g8s_A 164 GKLVRLTDQGEIPDDNPFIKESGVRAEIWS---YGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATW 240 (353)
T ss_dssp TEEEEEETTSCCCTTCTTTTSTTSCTTEEE---ECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCS
T ss_pred eEEEEECCCCCCCCCCCCcCCCCCCccEEE---EcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccC
Confidence 58999999997 334433 67889999999988999999998754 44443221110
Q ss_pred --------------------EE-EEEeCCccceeEEEeee--------CCeEEEecCCCCceEEEeccCC
Q psy952 210 --------------------KH-IVISGQKVPHVFALTLF--------EDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 210 --------------------~~-~l~~~~~~~~p~~ia~~--------~~~lywtd~~~~~I~~~~~~~g 250 (573)
.. ++.-.. ...|.|++++ .+.||++++..++|.++....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 241 GINYSGFKIPEAKGEIVAGTEQPVFYWKD-SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp SBCTTSSCCTTCCBSSCTTSCCCSEEESS-CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred CCCCCCCccCcccCCCCCCccCCeEEeCC-CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 00 000011 2368999995 4789999999999999986544
No 65
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.55 E-value=1.1e-12 Score=132.55 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=157.9
Q ss_pred ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE------cCCCCCcceeEEee---cCCcEEEEe
Q psy952 36 QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI------RHDSHGLEGLAVDW---VGRKLYWLD 106 (573)
Q Consensus 36 ~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~------~~~~~~p~glavD~---~~~~LY~td 106 (573)
..++++.++..|.+|++.+ +++||+++...++|++++.++...+.+. ..+...+.|||+++ .++.||++.
T Consensus 23 ~~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred eeEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 3456778899999999997 5789999998899999987654443332 23467899999997 478899865
Q ss_pred C--CCCeEEEEEcCCC--------ceeEecc-----CCCCcceEEEeCCCceEEEEecC------------CcCeEEEEe
Q psy952 107 R--HSKQLDVAELDGT--------NRKTLKT-----AIQDPRGITLHPGIGYVYFSSWN------------LQAYIGKIG 159 (573)
Q Consensus 107 ~--~~~~I~~~~ldg~--------~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~------------~~~~I~r~~ 159 (573)
+ ..++|.++.+++. ..++|+. ....+..|+++| .|+||++... ...+|.|++
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 3 4578999988762 2344443 223478899999 6899999521 246999999
Q ss_pred ccCC--------CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC---eEEEEeCCCCcE---------------E-E
Q psy952 160 MDGS--------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD---YIASVDLDGKHK---------------H-I 212 (573)
Q Consensus 160 ldG~--------~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~---~I~~~~~dG~~~---------------~-~ 212 (573)
.||+ ..+++. ..+..|.||++|+ .+.||++|.+.+ .|.++.. |.+- . +
T Consensus 181 ~dG~ip~~nPf~~~~i~a---~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~ 255 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYS---YGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPV 255 (347)
T ss_dssp TTSSBCTTCSSTTCCEEE---BCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCS
T ss_pred CCCCccCCCCCCCCeEEe---eCCCCcceEEECC-CCCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCc
Confidence 9998 444443 7899999999998 699999998764 4555432 2220 0 0
Q ss_pred EEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcc---eEEE-cccCCCceeeeee
Q psy952 213 VISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRD---YRVL-RNTTHRPYDIHVY 269 (573)
Q Consensus 213 l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~---~~~l-~~~~~~p~~i~v~ 269 (573)
+.-......|.||+++.+.+|.+.+...+|.++....+.. .+.+ .....+|.+|++-
T Consensus 256 ~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~ 316 (347)
T 3das_A 256 AQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPA 316 (347)
T ss_dssp EEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEE
T ss_pred EecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEEC
Confidence 0001102378999999999999999999999987543321 1223 2223456666553
No 66
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=2.4e-12 Score=128.79 Aligned_cols=215 Identities=13% Similarity=0.138 Sum_probs=153.4
Q ss_pred CEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC----CCCCc
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH----DSHGL 90 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~----~~~~p 90 (573)
..|++++ .+.|++++.++. ...+......+.++++|+ +++||+++...+.|++++.+|. .+.+... .+..|
T Consensus 57 ~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~g~-~~~~~~~~~~~~~~~~ 133 (305)
T 3dr2_A 57 RTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDADGQ-AHLLVGRYAGKRLNSP 133 (305)
T ss_dssp TEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSC-EEEEECEETTEECSCC
T ss_pred CEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCCCC-EEEEEeccCCCccCCC
Confidence 3566765 468899988654 444444456789999997 5679999988889999999854 3333321 24578
Q ss_pred ceeEEeecCCcEEEEeCC-----------------CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCC--
Q psy952 91 EGLAVDWVGRKLYWLDRH-----------------SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL-- 151 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~-----------------~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~-- 151 (573)
.+|++|. .++||+||.. .+.|+++++++...+.+. .+..|++|+++|....|||++...
T Consensus 134 ~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 134 NDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp CCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC--
T ss_pred CCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcC
Confidence 9999996 6789998741 357899988544444445 778899999999888899999642
Q ss_pred --cCeEEEEeccCCC---cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEe
Q psy952 152 --QAYIGKIGMDGSN---FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALT 226 (573)
Q Consensus 152 --~~~I~r~~ldG~~---~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia 226 (573)
...|++.++++.. .+++. ......|.||++|. +++||++. .+.|.+++.+|.....+.... .|..++
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~--~~~~~~pdgi~~d~-~G~lwv~~--~~gv~~~~~~g~~~~~~~~~~---~~~~~~ 283 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFA--SVPDGLPDGFCVDR-GGWLWSSS--GTGVCVFDSDGQLLGHIPTPG---TASNCT 283 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEE--CCSSSCCCSEEECT-TSCEEECC--SSEEEEECTTSCEEEEEECSS---CCCEEE
T ss_pred CCCCEEEEEEecCCCccCCeEEE--ECCCCCCCeEEECC-CCCEEEec--CCcEEEECCCCCEEEEEECCC---ceeEEE
Confidence 2689999887643 23444 33456799999995 56688887 356999999988776665432 477777
Q ss_pred e--eCCeEEEecCCCCceEEEe
Q psy952 227 L--FEDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 227 ~--~~~~lywtd~~~~~I~~~~ 246 (573)
+ .++.||++.. +.|++++
T Consensus 284 f~~d~~~L~it~~--~~l~~~~ 303 (305)
T 3dr2_A 284 FDQAQQRLFITGG--PCLWMLP 303 (305)
T ss_dssp ECTTSCEEEEEET--TEEEEEE
T ss_pred EeCCCCEEEEEcC--CeEEEEE
Confidence 7 4457888864 4677764
No 67
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=8.2e-12 Score=124.02 Aligned_cols=216 Identities=14% Similarity=0.098 Sum_probs=155.9
Q ss_pred EEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC----CCCCcce
Q psy952 19 LIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH----DSHGLEG 92 (573)
Q Consensus 19 l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~----~~~~p~g 92 (573)
|+++. ...|+++++++. ...+......|.+|++++ +++||+++...+.|+++++.....+.+... ....|.+
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 119 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPND 119 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCC
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCC
Confidence 55554 468999999877 555545556799999997 667999998888999999854444444321 2457889
Q ss_pred eEEeecCCcEEEEeC-----------------CCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeE
Q psy952 93 LAVDWVGRKLYWLDR-----------------HSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYI 155 (573)
Q Consensus 93 lavD~~~~~LY~td~-----------------~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I 155 (573)
|++|+ .++||++|. ..+.|++++.+|. .+.+...+..|.+|+++|....| |++.. ...|
T Consensus 120 i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~s~dg~~l-v~~~~-~~~i 195 (296)
T 3e5z_A 120 VCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAFLPSGNLL-VSDTG-DNAT 195 (296)
T ss_dssp EEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEECTTSCEE-EEETT-TTEE
T ss_pred EEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEECCCCCEE-EEeCC-CCeE
Confidence 99997 568999875 1358999988854 34455677889999999977667 99854 5689
Q ss_pred EEEecc--CCC---cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--
Q psy952 156 GKIGMD--GSN---FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-- 228 (573)
Q Consensus 156 ~r~~ld--G~~---~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-- 228 (573)
++.+++ |.. ..++ ......|.+|++|+ +++||++. .+.|.+++.+|.....+.... . |..+++.
T Consensus 196 ~~~~~~~~g~~~~~~~~~---~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~--~-~~~~~f~~~ 266 (296)
T 3e5z_A 196 HRYCLNARGETEYQGVHF---TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPDGDELGRVLTPQ--T-TSNLCFGGP 266 (296)
T ss_dssp EEEEECSSSCEEEEEEEE---CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTTSCEEEEEECSS--C-CCEEEEEST
T ss_pred EEEEECCCCcCcCCCeEe---eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCCCCEEEEEECCC--C-ceeEEEECC
Confidence 998885 432 2222 23456799999995 56899998 678999999987666655442 3 8888773
Q ss_pred -CCeEEEecCCCCceEEEeccCCc
Q psy952 229 -EDHIYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 229 -~~~lywtd~~~~~I~~~~~~~g~ 251 (573)
++.||++.. +.|++++..+..
T Consensus 267 d~~~L~v~t~--~~l~~~~~~~~~ 288 (296)
T 3e5z_A 267 EGRTLYMTVS--TEFWSIETNVRG 288 (296)
T ss_dssp TSCEEEEEET--TEEEEEECSCCB
T ss_pred CCCEEEEEcC--CeEEEEEccccc
Confidence 246888864 578888865544
No 68
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=5e-12 Score=126.18 Aligned_cols=218 Identities=13% Similarity=0.097 Sum_probs=154.4
Q ss_pred ecccEEEEEcCCCceeeccc-----CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEE-EcC----CCCCcce
Q psy952 23 NKYYVRNMSLDATQYSLVHQ-----DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERV-IRH----DSHGLEG 92 (573)
Q Consensus 23 ~~~~I~~i~l~g~~~~~~~~-----~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i-~~~----~~~~p~g 92 (573)
..+.|+++++....+..+.. ....|.+|++++..++||+++... .|++++++ .....+ ... ....|.+
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-GLLVVQTD-GTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-EEEEEETT-SCEEECCSBCTTSCBCBCCCE
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-CEEEEeCC-CCEEEEEeccCCCccccCCcC
Confidence 35679999876555443322 235689999997658999998754 79999988 333333 211 1346899
Q ss_pred eEEeecCCcEEEEeCCC---------------CeEEEEEcCCCceeEeccCCCCcceEEEe----CCCceEEEEecCCcC
Q psy952 93 LAVDWVGRKLYWLDRHS---------------KQLDVAELDGTNRKTLKTAIQDPRGITLH----PGIGYVYFSSWNLQA 153 (573)
Q Consensus 93 lavD~~~~~LY~td~~~---------------~~I~~~~ldg~~~~~l~~~~~~P~~Iavd----p~~g~LYwtd~~~~~ 153 (573)
|++|. .++||+++... +.|.+++.+|.. ..+...+..|.+|+++ +..+.||+++.. ..
T Consensus 122 i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~-~~ 198 (314)
T 1pjx_A 122 CAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP-TK 198 (314)
T ss_dssp EEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEETT-TT
T ss_pred EEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCE-EEeccCCCCcceEEEecccCCCCCEEEEEECC-CC
Confidence 99997 56899998754 689999888543 3444566779999999 976689999854 56
Q ss_pred eEEEEeccCCCc----EEEEecCCCC-CCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeCCccceeEEEee
Q psy952 154 YIGKIGMDGSNF----TRILTHEDDI-AWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKVPHVFALTL 227 (573)
Q Consensus 154 ~I~r~~ldG~~~----~~l~~~~~~l-~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~~~~~~p~~ia~ 227 (573)
.|.+.++++... ..+....... ..|.+|++|+ +++||+++...+.|.+++.+ |.....+... ...|.+|++
T Consensus 199 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~i~~ 275 (314)
T 1pjx_A 199 KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCP--FEKPSNLHF 275 (314)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECS--SSCEEEEEE
T ss_pred eEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC--CCCceeEEE
Confidence 888888763221 1222111222 5699999995 67999999888999999998 6655554332 367999998
Q ss_pred e-CC-eEEEecCCCCceEEEecc
Q psy952 228 F-ED-HIYWTDWNTKSINRADKF 248 (573)
Q Consensus 228 ~-~~-~lywtd~~~~~I~~~~~~ 248 (573)
. ++ .||+++...+.|.+++..
T Consensus 276 ~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 276 KPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCEEEEEeCCCCeEEEEeCC
Confidence 4 33 499999888899998754
No 69
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.53 E-value=4.1e-12 Score=128.48 Aligned_cols=214 Identities=14% Similarity=0.144 Sum_probs=152.7
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR 122 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~ 122 (573)
....+.+++|++.++.|||++...+.|+++++++.....+.. . ..|.+|+++.. ++||++. .+.|.++++++...
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~-~~v~~i~~~~d-g~l~v~~--~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-P-FMGSALAKISD-SKQLIAS--DDGLFLRDTATGVL 121 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-S-SCEEEEEEEET-TEEEEEE--TTEEEEEETTTCCE
T ss_pred CCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-C-CcceEEEEeCC-CeEEEEE--CCCEEEEECCCCcE
Confidence 345678999999899999999999999999998765543332 2 47889999864 6677776 34599999876555
Q ss_pred eEeccC-----CCCcceEEEeCCCceEEEEecC-----CcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEE
Q psy952 123 KTLKTA-----IQDPRGITLHPGIGYVYFSSWN-----LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYW 192 (573)
Q Consensus 123 ~~l~~~-----~~~P~~Iavdp~~g~LYwtd~~-----~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw 192 (573)
+.+... ...|++|++|| .|.||+++.+ ....|++++ +|... .+. ..+..|++|+++++++.|||
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~---~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLF---ADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEE---EEESSEEEEEECTTSCEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-Eee---CCCcccCCeEEcCCCCEEEE
Confidence 544321 23589999999 5778888743 135799988 65432 233 34567999999988889999
Q ss_pred EeCCCCeEEEEeCC---C-C--cEEEEEe-CCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEcccCCCce
Q psy952 193 ADAHLDYIASVDLD---G-K--HKHIVIS-GQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPY 264 (573)
Q Consensus 193 ~D~~~~~I~~~~~d---G-~--~~~~l~~-~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~ 264 (573)
++...+.|++++++ | . .++++.. ......|.+|+++ ++.||++.+..+.|.+++. +|+....+......|.
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~ 274 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTT 274 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEE
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcE
Confidence 99988999999985 4 2 2334433 1114579999996 5679999988889999986 6665555543333455
Q ss_pred eeee
Q psy952 265 DIHV 268 (573)
Q Consensus 265 ~i~v 268 (573)
.+++
T Consensus 275 ~~af 278 (326)
T 2ghs_A 275 CPAF 278 (326)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 70
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=7.3e-13 Score=135.04 Aligned_cols=218 Identities=11% Similarity=0.067 Sum_probs=149.0
Q ss_pred cceEEEEEEcCCCEEEEEECC--CC--eEEEEEcCCCcceEE------EcCCCCCcceeEEeecCCcEEEEeCC-----C
Q psy952 45 LNVVAMDFHYKENRFYFADVA--AK--TIYRSRVGSTEKERV------IRHDSHGLEGLAVDWVGRKLYWLDRH-----S 109 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~--~~--~I~~~~~~g~~~~~i------~~~~~~~p~glavD~~~~~LY~td~~-----~ 109 (573)
..|.+|++++ +++||++... .+ +|++++ +|.. ..+ ....+..|.+|++|.. ++|||+|.. .
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGL-IPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEE-EESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCe-ecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCC
Confidence 5799999996 6789999642 23 788887 5421 111 1123679999999975 789999976 5
Q ss_pred CeEEEEEcC-CCceeEec-c-----CCCCcceEEEeCCCceEEEEecC--CcCeEEEEeccCCCcEEEEec---------
Q psy952 110 KQLDVAELD-GTNRKTLK-T-----AIQDPRGITLHPGIGYVYFSSWN--LQAYIGKIGMDGSNFTRILTH--------- 171 (573)
Q Consensus 110 ~~I~~~~ld-g~~~~~l~-~-----~~~~P~~Iavdp~~g~LYwtd~~--~~~~I~r~~ldG~~~~~l~~~--------- 171 (573)
++|.++++. |...+++. . ....|.+|+||+..+++|+++.+ ....|.+.+++......++..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 799999997 44344432 1 12358999999988999999963 356788888763332222200
Q ss_pred ----CC--------------CCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC----CC--c------EEEEEeCCccce
Q psy952 172 ----ED--------------DIAWPNALTLDYFTERLYWADAHLDYIASVDLD----GK--H------KHIVISGQKVPH 221 (573)
Q Consensus 172 ----~~--------------~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d----G~--~------~~~l~~~~~~~~ 221 (573)
.. -...|+||+++++++.||+++....+|++++.+ +. . ...+ +. ...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--g~-~g~ 249 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY--SE-KPI 249 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE--EE-CCS
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec--cc-CCC
Confidence 00 013479999999888999999988899999853 21 1 1111 11 347
Q ss_pred eEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEcc-cCCCceeeeee
Q psy952 222 VFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRN-TTHRPYDIHVY 269 (573)
Q Consensus 222 p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~-~~~~p~~i~v~ 269 (573)
|.||+++ ++.||++++..++|.+++..+|+...++.. .+..|.+|++-
T Consensus 250 pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~ 299 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFG 299 (343)
T ss_dssp CSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEEC
T ss_pred CceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEEC
Confidence 8999995 578999999999999999646654333322 25567777764
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=1.2e-11 Score=125.32 Aligned_cols=210 Identities=16% Similarity=0.173 Sum_probs=157.5
Q ss_pred CcceEEEEEEcCCCEEEEEECC------CCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEc
Q psy952 44 LLNVVAMDFHYKENRFYFADVA------AKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAEL 117 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~------~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~l 117 (573)
...+.+++|++.+++||+++.. .+.|+++++.+......+..+ ..|.++++++.++.||+++...+.|.++++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3458899999999999999976 568999998765544334333 579999999988889999998899999998
Q ss_pred CCCce-eEecc-CCC--------CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccC
Q psy952 118 DGTNR-KTLKT-AIQ--------DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFT 187 (573)
Q Consensus 118 dg~~~-~~l~~-~~~--------~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~ 187 (573)
..... ..+.. ... .|++|+++|..++||+++++....|.+.++........+ ......|.++++++.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI--QNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE--CCCCTTCCCCEEETTT
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe--cCCCCccceEEECCCC
Confidence 75443 33322 111 389999999989999999766778999988765544444 3244569999999999
Q ss_pred CeEEEEeCCCCeEEEEeCCCCcEEEEEeC-C--ccceeEEEeee--CCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 188 ERLYWADAHLDYIASVDLDGKHKHIVISG-Q--KVPHVFALTLF--EDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 188 ~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~--~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
++||+++. .+.|..+++........... . ....|.+|++. +++||+++...+.|..++..+++....+.
T Consensus 197 ~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 197 KRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp TEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 99999976 67899999876544333321 1 13457788874 66799999988999999988887666554
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.49 E-value=2.1e-11 Score=122.61 Aligned_cols=228 Identities=8% Similarity=0.003 Sum_probs=163.7
Q ss_pred CEEEEEe--cccEEEEEcCCCceee-cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-eEEEcCCCCCcce
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSL-VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-ERVIRHDSHGLEG 92 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~-~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~i~~~~~~~p~g 92 (573)
.+++++. .+.|+.+++...+... +..+...+ +++|++.++.||++....+.|+++++.+... ...+..+ ..|..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~ 87 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG-QSSMA 87 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC-SSCCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC-CCCcc
Confidence 4556655 4789999998655433 33345556 9999998889999999889999999977654 3333333 57777
Q ss_pred -eEEeecCCcEEEEeCCCC--eEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE---
Q psy952 93 -LAVDWVGRKLYWLDRHSK--QLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT--- 166 (573)
Q Consensus 93 -lavD~~~~~LY~td~~~~--~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~--- 166 (573)
+++++.++.||.+....+ .|.+.++........+.....|.+++++|...+||+++......|...+++.....
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 999998888994443334 89999998665544455556799999999888899998653332555555432221
Q ss_pred --EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCc----EEEEEeCCccceeEEEeee--CCeEEEecCC
Q psy952 167 --RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH----KHIVISGQKVPHVFALTLF--EDHIYWTDWN 238 (573)
Q Consensus 167 --~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~----~~~l~~~~~~~~p~~ia~~--~~~lywtd~~ 238 (573)
.++ .....|.++++++.+++||++....+.|..+++.... ...+..+ ..|.+|++. +.+||++...
T Consensus 168 ~~~~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 168 GQEFI---SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp EEEEE---CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECTTSSEEEEECSS
T ss_pred CCccc---cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECCCCCEEEEEEcC
Confidence 122 3345689999999888899999999999999987443 3333322 467778874 5569999888
Q ss_pred CCceEEEeccCCcc
Q psy952 239 TKSINRADKFNGRD 252 (573)
Q Consensus 239 ~~~I~~~~~~~g~~ 252 (573)
.+.|..++..+++.
T Consensus 242 ~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 242 TVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEEEEETTTTEE
T ss_pred CCEEEEEECCCCce
Confidence 88899998777654
No 73
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.49 E-value=2.2e-12 Score=132.04 Aligned_cols=225 Identities=9% Similarity=0.104 Sum_probs=152.9
Q ss_pred EEEEe-cccEEEEEcCCCceee-------cccCCcceEEEEEEcC---CCEEEEEECC-------CCeEEEEEcCCC---
Q psy952 19 LIFSN-KYYVRNMSLDATQYSL-------VHQDLLNVVAMDFHYK---ENRFYFADVA-------AKTIYRSRVGST--- 77 (573)
Q Consensus 19 l~~s~-~~~I~~i~l~g~~~~~-------~~~~~~~~~~v~~d~~---~~~ly~~d~~-------~~~I~~~~~~g~--- 77 (573)
|+++. ...|++++.++...+. .......+.+|++++. +++||+++.. ..+|.|+.+++.
T Consensus 32 l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~ 111 (353)
T 2g8s_A 32 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSK 111 (353)
T ss_dssp EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSB
T ss_pred EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCC
Confidence 66665 4688888876642211 1223456899999986 8999999764 358999988653
Q ss_pred --cceEEEcC------CCCCcceeEEeecCCcEEEEeCC-------------CCeEEEEEcCCC-------------cee
Q psy952 78 --EKERVIRH------DSHGLEGLAVDWVGRKLYWLDRH-------------SKQLDVAELDGT-------------NRK 123 (573)
Q Consensus 78 --~~~~i~~~------~~~~p~glavD~~~~~LY~td~~-------------~~~I~~~~ldg~-------------~~~ 123 (573)
..++++.. ..+.+.+|++++ .++||++... .++|.+++.+|+ ..+
T Consensus 112 ~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~ 190 (353)
T 2g8s_A 112 VTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAE 190 (353)
T ss_dssp EEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTT
T ss_pred CCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCcc
Confidence 23344321 235688999997 5599999633 468999999987 344
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCc--CeEEEEeccCCC----------------------------cEEEEecCC
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQ--AYIGKIGMDGSN----------------------------FTRILTHED 173 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~--~~I~r~~ldG~~----------------------------~~~l~~~~~ 173 (573)
++..++.+|.+|++||..|.||+++.+.. ..|.++...+.. ..++. ..
T Consensus 191 i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~--~~ 268 (353)
T 2g8s_A 191 IWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFY--WK 268 (353)
T ss_dssp EEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEE--ES
T ss_pred EEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEE--eC
Confidence 55568889999999998899999997632 244443221110 00000 01
Q ss_pred CCCCCceEEEec------cCCeEEEEeCCCCeEEEEeCCCCcE---EEEEeCCccceeEEEeee-CCeEEEe-cCCCCce
Q psy952 174 DIAWPNALTLDY------FTERLYWADAHLDYIASVDLDGKHK---HIVISGQKVPHVFALTLF-EDHIYWT-DWNTKSI 242 (573)
Q Consensus 174 ~l~~P~glaiD~------~~~~LYw~D~~~~~I~~~~~dG~~~---~~l~~~~~~~~p~~ia~~-~~~lywt-d~~~~~I 242 (573)
....|.|+++.. ..+.||+++...++|.++++++... ..++... ..+|.+|++. ++.||++ |..+++|
T Consensus 269 ~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 269 DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDR-GQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGG-CCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCC-CCceeEEEECCCCcEEEEEeCCCCEE
Confidence 123688999974 2489999999999999999986432 1122221 4589999995 5689996 7788999
Q ss_pred EEEec
Q psy952 243 NRADK 247 (573)
Q Consensus 243 ~~~~~ 247 (573)
+|+.+
T Consensus 348 ~ri~~ 352 (353)
T 2g8s_A 348 LKVSP 352 (353)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99853
No 74
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.48 E-value=6.1e-11 Score=122.10 Aligned_cols=243 Identities=12% Similarity=0.090 Sum_probs=180.3
Q ss_pred CEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeE
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLA 94 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gla 94 (573)
++|+++. .+.|+.+++........+.....+.+++|.+.++.||++....+.|+.+++........+..+ ..|.+++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~ 80 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVA 80 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-CCccceE
Confidence 3566665 478999999876554444555668999999999999999988889999998765544444433 3899999
Q ss_pred EeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCC
Q psy952 95 VDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD 174 (573)
Q Consensus 95 vD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~ 174 (573)
+.+.++.||++....+.|.+.++........+.....|.+++++|...+||++.. ....|...++........+ ..
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~---~~ 156 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN-GDKTVSVINTVTKAVINTV---SV 156 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEE---EC
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEE---ec
Confidence 9998899999998889999999987665555555557899999998888988874 3678888888655444333 22
Q ss_pred CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEecC--CCCceEEEeccCC
Q psy952 175 IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDW--NTKSINRADKFNG 250 (573)
Q Consensus 175 l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~--~~~~I~~~~~~~g 250 (573)
-..|..+++++.+.+||++....+.|...++........+.. ...+.++++. +.+||++.. ..+.|...+..++
T Consensus 157 ~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 157 GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 356799999998899999998889999999977655444443 3477888874 457888876 6788988887777
Q ss_pred cceEEEcccCCCceeee
Q psy952 251 RDYRVLRNTTHRPYDIH 267 (573)
Q Consensus 251 ~~~~~l~~~~~~p~~i~ 267 (573)
+....+... ..|..++
T Consensus 235 ~~~~~~~~~-~~~~~~~ 250 (391)
T 1l0q_A 235 KITARIPVG-PDPAGIA 250 (391)
T ss_dssp EEEEEEECC-SSEEEEE
T ss_pred eEEEEEecC-CCccEEE
Confidence 655555432 2344443
No 75
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.48 E-value=1.5e-11 Score=124.08 Aligned_cols=225 Identities=11% Similarity=0.138 Sum_probs=158.2
Q ss_pred CEEEEEe--cccEEEEEcCCCceeecc-cCCcceEEEEEEcCCCEEEEEECCC----CeEEEEEcCCCcceEEEcC--CC
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSLVH-QDLLNVVAMDFHYKENRFYFADVAA----KTIYRSRVGSTEKERVIRH--DS 87 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~~~-~~~~~~~~v~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~~~i~~~--~~ 87 (573)
.-|+++. ...|+++++++.....+. .....|.+|++++ +++||++.... +.|+++++++.....++.. ..
T Consensus 56 g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 56 GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence 3455553 467999998876654432 3446699999996 56799998766 6899999988766544431 23
Q ss_pred CCcceeEEeecCCcEEEEeCC------CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEec-
Q psy952 88 HGLEGLAVDWVGRKLYWLDRH------SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGM- 160 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~------~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~l- 160 (573)
..|.+|++|+ .++||+++.. .+.|+++++++...+.+...+..|.+|+++|...+||+++.. ...|.+.++
T Consensus 135 ~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~-~~~i~~~d~~ 212 (333)
T 2dg1_A 135 YCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETT-ANRLHRIALE 212 (333)
T ss_dssp CCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG-GTEEEEEEEC
T ss_pred CcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCC-CCeEEEEEec
Confidence 5789999997 5689999864 467999998876555555566679999999977789999853 568998888
Q ss_pred -cCCCcEE-----EEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCc----cceeEEEeee--
Q psy952 161 -DGSNFTR-----ILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQK----VPHVFALTLF-- 228 (573)
Q Consensus 161 -dG~~~~~-----l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~----~~~p~~ia~~-- 228 (573)
+|..... +.. ......|.+|++|+ +++||+++...+.|.+++.+|.....+..... +..|.++++.
T Consensus 213 ~~g~~~~~~~~~~~~~-~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYY-FTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp TTSSSEEEEEEEEEEE-CCSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred CCCcCcccccceEEEe-cCCCCCCCceEECC-CCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCC
Confidence 4443322 111 12234789999995 57899999888899999998876665543210 1268888884
Q ss_pred CCeEEEecCC-----CCceEEEe
Q psy952 229 EDHIYWTDWN-----TKSINRAD 246 (573)
Q Consensus 229 ~~~lywtd~~-----~~~I~~~~ 246 (573)
++.||++... .+.|++++
T Consensus 291 g~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 291 TNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp SCEEEEEEECGGGTCCEEEEEEE
T ss_pred CCEEEEEeCccCCCCCceEEEEe
Confidence 3578888654 23566665
No 76
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.47 E-value=6.7e-11 Score=121.82 Aligned_cols=244 Identities=13% Similarity=0.100 Sum_probs=181.2
Q ss_pred ceeeCCCCCCEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 8 TCKRRDSIKPWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
.+.+......+|+++. .+.|+.+++...+....+.....+.+++|++.++.||++....+.|+.+++.+......+..
T Consensus 35 ~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC
Confidence 4444443345666664 57899999876655444444457899999999999999998889999999987655444443
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCc
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF 165 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~ 165 (573)
+ ..+.++++.+.++.||++....+.|.+.++........+.....|.+++++|...+||++.. ....|...++.....
T Consensus 115 ~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~-~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 115 G-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANF-DSMSISVIDTVTNSV 192 (391)
T ss_dssp S-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEET-TTTEEEEEETTTTEE
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeC-CCCEEEEEECCCCeE
Confidence 3 57899999988888999998889999999876554444444567899999998889998874 356788888876544
Q ss_pred EEEEecCCCCCCCceEEEeccCCeEEEEeC--CCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEecCCCCc
Q psy952 166 TRILTHEDDIAWPNALTLDYFTERLYWADA--HLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKS 241 (573)
Q Consensus 166 ~~l~~~~~~l~~P~glaiD~~~~~LYw~D~--~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~ 241 (573)
...+ ..-..|.++++++.+.+||++.. ..+.|...++........+.. ...|.++++. +.+||++....+.
T Consensus 193 ~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 193 IDTV---KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV--GPDPAGIAVTPDGKKVYVALSFXNT 267 (391)
T ss_dssp EEEE---ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEE---ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec--CCCccEEEEccCCCEEEEEcCCCCE
Confidence 4444 22346789999998899999986 678999999876554444433 2357888874 5579899888899
Q ss_pred eEEEeccCCcceEEEcc
Q psy952 242 INRADKFNGRDYRVLRN 258 (573)
Q Consensus 242 I~~~~~~~g~~~~~l~~ 258 (573)
|...+..+++....+..
T Consensus 268 v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 268 VSVIDTATNTITATMAV 284 (391)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEEC
Confidence 99999888876666644
No 77
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.43 E-value=4.4e-11 Score=121.34 Aligned_cols=227 Identities=13% Similarity=0.065 Sum_probs=150.0
Q ss_pred ccEEEEEcCCCceeec---ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC-cceEEE---cCC--------CCC
Q psy952 25 YYVRNMSLDATQYSLV---HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST-EKERVI---RHD--------SHG 89 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~---~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~i~---~~~--------~~~ 89 (573)
..|+.+++++...+.+ ......|.+|+|++.++.||+++...+.|..++++.. ....+. ..+ ...
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCC
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCC
Confidence 5788888865544332 2245668899999999999999988888888887532 222221 111 124
Q ss_pred cceeEEeecCCcEEEEeCCCCeEEEEEcC-CCceeEe----ccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC--
Q psy952 90 LEGLAVDWVGRKLYWLDRHSKQLDVAELD-GTNRKTL----KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG-- 162 (573)
Q Consensus 90 p~glavD~~~~~LY~td~~~~~I~~~~ld-g~~~~~l----~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG-- 162 (573)
|.++++++.++ ||+++...+.|.+++++ ......+ ......|++|+++|...+||+++.. ...|....++.
T Consensus 143 ~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 143 IHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL-SSQIASLKYDTQT 220 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TTEEEEEEEETTT
T ss_pred ceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC-CCEEEEEEecCCC
Confidence 77899998777 99999988999999987 2222221 1233469999999987789998754 45666666664
Q ss_pred CCcEEEEecCC-C-----CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCC-cEEEEEe--CCccceeEEEeee--CCe
Q psy952 163 SNFTRILTHED-D-----IAWPNALTLDYFTERLYWADAHLDYIASVDLDGK-HKHIVIS--GQKVPHVFALTLF--EDH 231 (573)
Q Consensus 163 ~~~~~l~~~~~-~-----l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~-~~~~l~~--~~~~~~p~~ia~~--~~~ 231 (573)
...+.+..... . ...|.+|++++++++||++....+.|..++++.. ..+.+.. .. ...|.+|++. +.+
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDPTEAF 299 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECTTSSE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECCCCCE
Confidence 22111110011 1 1357889999999999999988888888887622 2222222 11 2368888884 557
Q ss_pred EEEecCCCCceEEE--eccCCcceE
Q psy952 232 IYWTDWNTKSINRA--DKFNGRDYR 254 (573)
Q Consensus 232 lywtd~~~~~I~~~--~~~~g~~~~ 254 (573)
||+++...+.|... +..+|+...
T Consensus 300 l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 300 VVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 99999887766554 655665443
No 78
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.42 E-value=6.4e-11 Score=119.57 Aligned_cols=218 Identities=12% Similarity=0.142 Sum_probs=150.6
Q ss_pred CCCEEEEEec--ccEEEEEcCCCceeec-------ccCCcceEEEEEEcC---CCEEEEEEC--CCCeEEEEEcCCC---
Q psy952 15 IKPWLIFSNK--YYVRNMSLDATQYSLV-------HQDLLNVVAMDFHYK---ENRFYFADV--AAKTIYRSRVGST--- 77 (573)
Q Consensus 15 ~~~~l~~s~~--~~I~~i~l~g~~~~~~-------~~~~~~~~~v~~d~~---~~~ly~~d~--~~~~I~~~~~~g~--- 77 (573)
+..-|+++.+ ..|++++.++...+.+ ..+...+.+|++++. ++.||++.. ..++|.|+.+++.
T Consensus 41 pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~ 120 (347)
T 3das_A 41 PGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPS 120 (347)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCT
T ss_pred CCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcc
Confidence 3445677764 6799998764433221 234667899999984 789998753 4568999998762
Q ss_pred -----cceEEEc----CCCCCcceeEEeecCCcEEEEeC-------------CCCeEEEEEcCCC--------ceeEecc
Q psy952 78 -----EKERVIR----HDSHGLEGLAVDWVGRKLYWLDR-------------HSKQLDVAELDGT--------NRKTLKT 127 (573)
Q Consensus 78 -----~~~~i~~----~~~~~p~glavD~~~~~LY~td~-------------~~~~I~~~~ldg~--------~~~~l~~ 127 (573)
..++|+. ...+....|++++ .++||++-. ..++|.+++.+|+ ..+++..
T Consensus 121 ~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~ 199 (347)
T 3das_A 121 GEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY 199 (347)
T ss_dssp TCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB
T ss_pred cccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEee
Confidence 2344442 2345677899997 568999942 3589999999997 4455667
Q ss_pred CCCCcceEEEeCCCceEEEEecCCc--CeEEEEeccCCCc---------------EEEEecCCCCCCCceEEEeccCCeE
Q psy952 128 AIQDPRGITLHPGIGYVYFSSWNLQ--AYIGKIGMDGSNF---------------TRILTHEDDIAWPNALTLDYFTERL 190 (573)
Q Consensus 128 ~~~~P~~Iavdp~~g~LYwtd~~~~--~~I~r~~ldG~~~---------------~~l~~~~~~l~~P~glaiD~~~~~L 190 (573)
++.+|.+|++|| .|.||+++.+.. ..|.++.. |.+. ..++........|.||++. .+.|
T Consensus 200 G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~ 275 (347)
T 3das_A 200 GHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA--EGSV 275 (347)
T ss_dssp CCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE--TTEE
T ss_pred CCCCcceEEECC-CCCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE--cCce
Confidence 999999999999 699999997642 34555543 2220 0001001122468899997 7899
Q ss_pred EEEeCCCCeEEEEeCCCCc----EEEEEeCCccceeEEEee-eCCeEEEecCC
Q psy952 191 YWADAHLDYIASVDLDGKH----KHIVISGQKVPHVFALTL-FEDHIYWTDWN 238 (573)
Q Consensus 191 Yw~D~~~~~I~~~~~dG~~----~~~l~~~~~~~~p~~ia~-~~~~lywtd~~ 238 (573)
|.+.....+|.++.+++.. .+.++.+. ..+|.+|++ -++.||+++..
T Consensus 276 ~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~-~gR~~dv~~~pDG~lyv~td~ 327 (347)
T 3das_A 276 WMAGLRGERLWRIPLKGTAAAADPQAFLEGE-YGRLRTVAPAGGDKLWLVTSN 327 (347)
T ss_dssp EEEESTTCSEEEEEEETTEESSCCEEESTTT-SSCEEEEEEEETTEEEEEECT
T ss_pred eeccccCCEEEEEEecCCceecceEEeecCC-CCCccEEEECCCCcEEEEEcC
Confidence 9999999999999987653 24444443 578999998 47899998543
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.41 E-value=2.6e-10 Score=114.57 Aligned_cols=254 Identities=11% Similarity=0.094 Sum_probs=165.2
Q ss_pred CCEEEEEec--ccEEEEEcC--CCceeec--ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcC-CCcceEE-EcCCC
Q psy952 16 KPWLIFSNK--YYVRNMSLD--ATQYSLV--HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVG-STEKERV-IRHDS 87 (573)
Q Consensus 16 ~~~l~~s~~--~~I~~i~l~--g~~~~~~--~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~i-~~~~~ 87 (573)
..+|+++.. ..|+.++++ +.....+ +.....|.+|+|++.++.||++....+.|..++++ +...+.+ .....
T Consensus 49 g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 128 (343)
T 1ri6_A 49 KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 128 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC
T ss_pred CCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC
Confidence 356777665 678877776 4443322 22233788999999999999999888888888873 2211211 12234
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCC-CceeE-----ec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEec
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG-TNRKT-----LK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGM 160 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg-~~~~~-----l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~l 160 (573)
..|.++++++.++.||+++...+.|.+.++.. ..... +. .....|++|+++|...+||++... ...|...++
T Consensus 129 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-~~~i~~~~~ 207 (343)
T 1ri6_A 129 DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-NSSVDVWEL 207 (343)
T ss_dssp TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-TTEEEEEES
T ss_pred CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-CCEEEEEEe
Confidence 57999999998889999997788999998865 32221 11 234579999999988889999843 567888887
Q ss_pred cC--CCcE---EEEecCC---CCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC--CCcEEEEEeCCccceeEEEeee--
Q psy952 161 DG--SNFT---RILTHED---DIAWPNALTLDYFTERLYWADAHLDYIASVDLD--GKHKHIVISGQKVPHVFALTLF-- 228 (573)
Q Consensus 161 dG--~~~~---~l~~~~~---~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d--G~~~~~l~~~~~~~~p~~ia~~-- 228 (573)
+. ...+ .+..... ....|.+|++++.+++||++....+.|..++++ +...+.+..-.....|.++++.
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~d 287 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHS 287 (343)
T ss_dssp SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTT
T ss_pred cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCC
Confidence 53 2221 1110011 133566899999888999999888889888887 4444433221001247788874
Q ss_pred CCeEEEecCCCCceEEE--eccCCcceEEEc-ccCCCceeeeeee
Q psy952 229 EDHIYWTDWNTKSINRA--DKFNGRDYRVLR-NTTHRPYDIHVYH 270 (573)
Q Consensus 229 ~~~lywtd~~~~~I~~~--~~~~g~~~~~l~-~~~~~p~~i~v~~ 270 (573)
+.+||++....+.|... +..+|+...+.. .....|..|++..
T Consensus 288 g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 288 GKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp SSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEE
T ss_pred CCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEc
Confidence 56799998777766544 655665433221 1125688877654
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.39 E-value=9.8e-11 Score=117.63 Aligned_cols=210 Identities=12% Similarity=0.049 Sum_probs=150.5
Q ss_pred EEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eEeccCC
Q psy952 51 DFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KTLKTAI 129 (573)
Q Consensus 51 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l~~~~ 129 (573)
.|+...+.+|+++...+.|..+++........+..+...| +|++++.++.||++....+.|.++++.+... ...+...
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4667789999999999999999998765554555555667 9999998889999999888999999976654 4444555
Q ss_pred CCcce-EEEeCCCceEEEEecCCcC--eEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCe-EEEEeC
Q psy952 130 QDPRG-ITLHPGIGYVYFSSWNLQA--YIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDY-IASVDL 205 (573)
Q Consensus 130 ~~P~~-Iavdp~~g~LYwtd~~~~~--~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~-I~~~~~ 205 (573)
..|.. |+++|...+||.+. .... .|...+++.......+ .....|.++++++.+++||+++...+. |..+++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~-~~~~~~~i~v~d~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVT-GLNHPFNMQSYSFLKNKFISTI---PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SSCCCCEEECTTSSEEEECC-CSSSSCEEEEEETTTTEEEEEE---ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEEEec-CCCCcccEEEEECCCCCeEEEE---ECCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 67888 99999888899444 2223 8999988765544434 234568999999988899999988777 776666
Q ss_pred CCCcE-----EEEEeCCccceeEEEeee--CCeEEEecCCCCceEEEeccCCcc---eEEEcccCCCceeeee
Q psy952 206 DGKHK-----HIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNGRD---YRVLRNTTHRPYDIHV 268 (573)
Q Consensus 206 dG~~~-----~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~g~~---~~~l~~~~~~p~~i~v 268 (573)
+.... ..++.. ...|.++++. +.+||++....+.|...+..+++. ...+... ..|.++++
T Consensus 159 ~~~g~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (331)
T 3u4y_A 159 DADGVLFDTGQEFISG--GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV 228 (331)
T ss_dssp CTTCCEEEEEEEEECS--SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE
T ss_pred CCCCcEeecCCccccC--CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE
Confidence 53221 111222 3468888884 446999999999999999878876 4444432 34555543
No 81
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.39 E-value=5.1e-11 Score=118.03 Aligned_cols=199 Identities=11% Similarity=0.077 Sum_probs=141.3
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC-------CCcceeEE---eecCCcEEE-EeC-----
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS-------HGLEGLAV---DWVGRKLYW-LDR----- 107 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~-------~~p~glav---D~~~~~LY~-td~----- 107 (573)
...|.+++||..++++|+++...+.|.++++++...+.+...++ ..|.||.+ |+. ++|++ ++.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 34589999999999999999999999999998654444433332 25789999 675 77877 552
Q ss_pred -------CCCeEEEEEcC----CCceeEe-cc------------CCCCcceEEEeCCCceEEEEecCCc-CeEEEEeccC
Q psy952 108 -------HSKQLDVAELD----GTNRKTL-KT------------AIQDPRGITLHPGIGYVYFSSWNLQ-AYIGKIGMDG 162 (573)
Q Consensus 108 -------~~~~I~~~~ld----g~~~~~l-~~------------~~~~P~~Iavdp~~g~LYwtd~~~~-~~I~r~~ldG 162 (573)
+.+.|.+++++ |.....+ ++ ....|.+||+|+ .|++|+++.. . +.|+|++.||
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~-~~~~I~rV~pdG 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFAL-GMPAIARVSADG 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEE-SSCEEEEECTTS
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCC-CCCeEEEEeCCC
Confidence 35679999998 4333221 11 112489999999 7999999864 5 8899999999
Q ss_pred CCcEEEEecC---CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEE-e--C--CccceeEEE-ee-eCCeE
Q psy952 163 SNFTRILTHE---DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVI-S--G--QKVPHVFAL-TL-FEDHI 232 (573)
Q Consensus 163 ~~~~~l~~~~---~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~-~--~--~~~~~p~~i-a~-~~~~l 232 (573)
+....+.... .....++||++.+.+..|++++. .++|.++++....+..+. . + ..+..|.+| ++ .++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 9665544201 12334789999999999999998 999999999843221122 1 2 126788996 54 57766
Q ss_pred -EEecCCCCceEEEe
Q psy952 233 -YWTDWNTKSINRAD 246 (573)
Q Consensus 233 -ywtd~~~~~I~~~~ 246 (573)
++++...+.+...+
T Consensus 248 llV~~~~~~~~~l~S 262 (334)
T 2p9w_A 248 VLVGARAPYAISFRS 262 (334)
T ss_dssp EEEEEETTEEEEEEC
T ss_pred EEEEcCCCCEEEEEC
Confidence 99987766554444
No 82
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.39 E-value=6.4e-11 Score=123.29 Aligned_cols=243 Identities=9% Similarity=-0.006 Sum_probs=154.7
Q ss_pred CEEEEEec------ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEEC---------CCCeEEEEEcCCCcc-e
Q psy952 17 PWLIFSNK------YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADV---------AAKTIYRSRVGSTEK-E 80 (573)
Q Consensus 17 ~~l~~s~~------~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~-~ 80 (573)
..+|+++. +.|.+|++...++...+.....| +|++++.+++||+++. ..+.|..+++..... .
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 46777775 68999999877654444444568 9999999999999985 356799998876443 2
Q ss_pred EEEcC-C-----CCCcceeEEeecCCcEEEEeCC-CCeEEEEEcCCCcee-Eecc-C--CCCcce----EEEeCCCceEE
Q psy952 81 RVIRH-D-----SHGLEGLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRK-TLKT-A--IQDPRG----ITLHPGIGYVY 145 (573)
Q Consensus 81 ~i~~~-~-----~~~p~glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~-~l~~-~--~~~P~~----Iavdp~~g~LY 145 (573)
.|... . ...|.+|+|++.+++||+++.. .+.|.++|+...... .+.- + ...|.+ +++.+....+|
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~ 243 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLAR 243 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEE
Confidence 23221 0 2579999999999999999975 688999998764432 2211 1 112223 45554333333
Q ss_pred EEecCC------------------------------------cCeEEEEeccCCCcEEEEe--cC--CC---CCCCce--
Q psy952 146 FSSWNL------------------------------------QAYIGKIGMDGSNFTRILT--HE--DD---IAWPNA-- 180 (573)
Q Consensus 146 wtd~~~------------------------------------~~~I~r~~ldG~~~~~l~~--~~--~~---l~~P~g-- 180 (573)
++. .. .+.++++++.+....++.. .. .. ...|.|
T Consensus 244 V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~ 322 (426)
T 3c75_H 244 VDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQ 322 (426)
T ss_dssp EEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSS
T ss_pred EEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCce
Confidence 322 11 1234444444333221110 00 00 012455
Q ss_pred -EEEeccCCeEEEEeCC---------CCeEEEEeCCCCcE-EEEEeCCccceeEEEeee--CC-eEEEecCCCCceEEEe
Q psy952 181 -LTLDYFTERLYWADAH---------LDYIASVDLDGKHK-HIVISGQKVPHVFALTLF--ED-HIYWTDWNTKSINRAD 246 (573)
Q Consensus 181 -laiD~~~~~LYw~D~~---------~~~I~~~~~dG~~~-~~l~~~~~~~~p~~ia~~--~~-~lywtd~~~~~I~~~~ 246 (573)
+++++++++||++... .+.|..+|.....+ ..|..+ ..|.+|++. +. .||++.+..+.|..++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 8999999999999742 35799999875544 333323 269999884 55 7999999999999999
Q ss_pred ccCCcceEEEcccCCCce
Q psy952 247 KFNGRDYRVLRNTTHRPY 264 (573)
Q Consensus 247 ~~~g~~~~~l~~~~~~p~ 264 (573)
..+++.+..+...-..|.
T Consensus 400 ~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 400 AATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp TTTCCEEEEECCCSSSCC
T ss_pred CCCCCEEEEecCCCCCCc
Confidence 999988877633233454
No 83
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.38 E-value=1.1e-10 Score=118.48 Aligned_cols=218 Identities=12% Similarity=0.051 Sum_probs=142.4
Q ss_pred EEEEEcCCCceee--cccCCcceEEEEEEcCCCEEEEEECC--CCeEEEEEcCCCcceEEEc--CCCCCcceeEEeecCC
Q psy952 27 VRNMSLDATQYSL--VHQDLLNVVAMDFHYKENRFYFADVA--AKTIYRSRVGSTEKERVIR--HDSHGLEGLAVDWVGR 100 (573)
Q Consensus 27 I~~i~l~g~~~~~--~~~~~~~~~~v~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~i~~--~~~~~p~glavD~~~~ 100 (573)
|+.++.....++. .......|.+|+|++.++ ||+++.. .+.|+.+++++...+.+.. .....|.+|++++.++
T Consensus 20 v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT
T ss_pred EEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC
Confidence 4444444343332 233456789999998555 9999864 5789999986654433322 2346899999999888
Q ss_pred cEEEEeCCCCeEEEEEcC--CCceeE--ecc---------CCCCcceEEEeCCCceEEEEecCCcCeEEEEecc--CCCc
Q psy952 101 KLYWLDRHSKQLDVAELD--GTNRKT--LKT---------AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD--GSNF 165 (573)
Q Consensus 101 ~LY~td~~~~~I~~~~ld--g~~~~~--l~~---------~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld--G~~~ 165 (573)
.||+++...+.|.+.+++ |..... +.. ....|.+++++|... ||+++.+ ...|...+++ |...
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~-~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG-SDKVYVYNVSDAGQLS 176 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT-TTEEEEEEECTTSCEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC-CCEEEEEEECCCCcEE
Confidence 999999888889888875 332211 111 122477899999655 9999864 4567777766 3322
Q ss_pred EEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC--CcEEEEEe--CCc-----cceeEEEeee--CCeEEE
Q psy952 166 TRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG--KHKHIVIS--GQK-----VPHVFALTLF--EDHIYW 234 (573)
Q Consensus 166 ~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG--~~~~~l~~--~~~-----~~~p~~ia~~--~~~lyw 234 (573)
............|.++++++++++||+++...+.|..++++. ...+.+.. ... ...|.+|++. +.+||+
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v 256 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYV 256 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEE
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEE
Confidence 111100233447889999998888999999888888887764 22222221 110 1358888884 457999
Q ss_pred ecCCCCceEEEec
Q psy952 235 TDWNTKSINRADK 247 (573)
Q Consensus 235 td~~~~~I~~~~~ 247 (573)
++...+.|...+.
T Consensus 257 ~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 257 SNRGYNTLAVFAV 269 (347)
T ss_dssp EEETTTEEEEEEE
T ss_pred EeCCCCEEEEEEE
Confidence 9988888877764
No 84
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.37 E-value=4.1e-10 Score=113.68 Aligned_cols=212 Identities=10% Similarity=0.032 Sum_probs=147.7
Q ss_pred CEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC----CCCc
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD----SHGL 90 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~----~~~p 90 (573)
..|++++ ...|+++++++....... ....+.+|++++ ++++|++. ...|+++++++...+.+.... ...|
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~-dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~ 136 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKIS-DSKQLIAS--DDGLFLRDTATGVLTLHAELESDLPGNRS 136 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEE-TTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCTTEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeC-CCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCCCCCC
Confidence 4666665 468999998876544332 224688999996 57788776 345999998766555454321 2468
Q ss_pred ceeEEeecCCcEEEEeCC------CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc---
Q psy952 91 EGLAVDWVGRKLYWLDRH------SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD--- 161 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~------~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld--- 161 (573)
.++++|+ .++||+++.. .+.|++++ +|.. +.+...+..|.+|+++|....|||++.. ...|++.+++
T Consensus 137 ~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~-~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 137 NDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKV-TKLFADISIPNSICFSPDGTTGYFVDTK-VNRLMRVPLDART 212 (326)
T ss_dssp EEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEE-EEEEEEESSEEEEEECTTSCEEEEEETT-TCEEEEEEBCTTT
T ss_pred CCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECC-CCEEEEEEccccc
Confidence 8999997 4568888742 46788888 6543 3344556679999999988899999854 5689999875
Q ss_pred C-C--CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee---CCeEEEe
Q psy952 162 G-S--NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF---EDHIYWT 235 (573)
Q Consensus 162 G-~--~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~---~~~lywt 235 (573)
| . .++++.........|.+|++|. +++||++....+.|.+++.+|...+.+... ...|.++++. ++.||++
T Consensus 213 Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~~g~~~~~i~~~--~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 213 GLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDTDGNHIARYEVP--GKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp CCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECTTCCEEEEEECS--CSBEEEEEEESTTSCEEEEE
T ss_pred CCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECCCCCEEEEEECC--CCCcEEEEEecCCCCEEEEE
Confidence 4 2 2234432122345689999994 568999998888999999987665555433 3478999985 2578888
Q ss_pred cCCC
Q psy952 236 DWNT 239 (573)
Q Consensus 236 d~~~ 239 (573)
....
T Consensus 290 ~~~~ 293 (326)
T 2ghs_A 290 SARE 293 (326)
T ss_dssp EBCT
T ss_pred ecCC
Confidence 6554
No 85
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.36 E-value=6.6e-11 Score=119.95 Aligned_cols=194 Identities=9% Similarity=0.009 Sum_probs=136.4
Q ss_pred CcceEEEEEEcCCCEEEEEE------------CCCCeEEEEEcCCC--cceEEEcCC------CCCcceeEEeec---CC
Q psy952 44 LLNVVAMDFHYKENRFYFAD------------VAAKTIYRSRVGST--EKERVIRHD------SHGLEGLAVDWV---GR 100 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d------------~~~~~I~~~~~~g~--~~~~i~~~~------~~~p~glavD~~---~~ 100 (573)
...+..|++++ ++.+|.+- ...++|++++++.. ..+.+...+ ...|.||.+... ..
T Consensus 49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 34688999986 78999986 25789999999742 223332222 248999999753 23
Q ss_pred cEEEEeCC--CCeEEEEEcC--CCceeEec-----cCCCCcceEEEeCCCceEEEEecC----------------CcCeE
Q psy952 101 KLYWLDRH--SKQLDVAELD--GTNRKTLK-----TAIQDPRGITLHPGIGYVYFSSWN----------------LQAYI 155 (573)
Q Consensus 101 ~LY~td~~--~~~I~~~~ld--g~~~~~l~-----~~~~~P~~Iavdp~~g~LYwtd~~----------------~~~~I 155 (573)
+||+++.. ..+|++++++ +.. .+++ ..+..|+++++++ .|.+|+++.. ..+.|
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~-~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKS-LLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTE-EEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCE-EEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 69999976 4567666554 433 3333 2567799999999 6788877631 13578
Q ss_pred EEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCC----cEEEEEeCCccceeEEEeeeC--
Q psy952 156 GKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGK----HKHIVISGQKVPHVFALTLFE-- 229 (573)
Q Consensus 156 ~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~----~~~~l~~~~~~~~p~~ia~~~-- 229 (573)
+|.+.. ..+++. +++..||||++++++++||++|+..++|+++++++. +++++ .- ...|.||+++.
T Consensus 206 yr~d~~--~~~~~~---~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~--~g~PDGi~vD~e~ 277 (355)
T 3sre_A 206 TYYSPN--DVRVVA---EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF--DTLVDNISVDPVT 277 (355)
T ss_dssp EEECTT--CCEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC--SSEEEEEEECTTT
T ss_pred EEEECC--eEEEee---cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC--CCCCceEEEeCCC
Confidence 888763 344444 678999999999999999999999999999998642 22333 22 36899999974
Q ss_pred CeEEEec-CCCCceEEEecc
Q psy952 230 DHIYWTD-WNTKSINRADKF 248 (573)
Q Consensus 230 ~~lywtd-~~~~~I~~~~~~ 248 (573)
+.||++. |...+|.+.++.
T Consensus 278 G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 278 GDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp CCEEEEEESCHHHHHSCCTT
T ss_pred CcEEEEecCCceEEEEECCC
Confidence 7888854 666667666544
No 86
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.35 E-value=1.6e-09 Score=110.41 Aligned_cols=235 Identities=12% Similarity=0.048 Sum_probs=152.2
Q ss_pred CEEEEEec-----ccEEEEEcCC--Cceeec---ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc-c----eE
Q psy952 17 PWLIFSNK-----YYVRNMSLDA--TQYSLV---HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE-K----ER 81 (573)
Q Consensus 17 ~~l~~s~~-----~~I~~i~l~g--~~~~~~---~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~----~~ 81 (573)
.+|+++.. ..|..+.++. ..++.+ ......|..+++ .++.||+++...+.|..++++... . ..
T Consensus 62 ~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~ 139 (361)
T 3scy_A 62 KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDV 139 (361)
T ss_dssp SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE
T ss_pred CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCccccee
Confidence 46666665 3665555432 333322 223456888888 578899999888899988886421 1 11
Q ss_pred EEcCC---------CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce--------------eEeccCCCCcceEEEe
Q psy952 82 VIRHD---------SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR--------------KTLKTAIQDPRGITLH 138 (573)
Q Consensus 82 i~~~~---------~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~--------------~~l~~~~~~P~~Iavd 138 (573)
+...+ ...|.++++++.++.||+++...+.|.+.+++.... .........|++++++
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s 219 (361)
T 3scy_A 140 IEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN 219 (361)
T ss_dssp EECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC
T ss_pred EEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc
Confidence 11111 123578999998888999999889999888764321 1122345679999999
Q ss_pred CCCceEEEEecCCcCeEEEEeccCCCcEEEEe---cCCCCCCCceEEEeccCCeEEEEeCC-CCeEEEEeCC--CCcEEE
Q psy952 139 PGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT---HEDDIAWPNALTLDYFTERLYWADAH-LDYIASVDLD--GKHKHI 212 (573)
Q Consensus 139 p~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~---~~~~l~~P~glaiD~~~~~LYw~D~~-~~~I~~~~~d--G~~~~~ 212 (573)
|...+||+++.. ...|...+++....+.+.. .......|.+|++++++++||+++.. .+.|..++++ ....+.
T Consensus 220 pdg~~l~v~~~~-~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~ 298 (361)
T 3scy_A 220 SDGKFAYLINEI-GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK 298 (361)
T ss_dssp TTSSEEEEEETT-TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEcCC-CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE
Confidence 988889999843 4567777776433222221 12234567899999999999999988 7888777765 233333
Q ss_pred EEeCCccceeEEEeee--CCeEEEecCCCCceEE--EeccCCcceE
Q psy952 213 VISGQKVPHVFALTLF--EDHIYWTDWNTKSINR--ADKFNGRDYR 254 (573)
Q Consensus 213 l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~--~~~~~g~~~~ 254 (573)
+.....-..|.+|++. +.+||++....+.|.. ++..+|+...
T Consensus 299 ~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 299 VGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred eeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 2221002367888874 5679999877777655 6655665433
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.34 E-value=8.5e-10 Score=110.77 Aligned_cols=228 Identities=10% Similarity=0.074 Sum_probs=156.8
Q ss_pred CEEEEEe--cccEEEEEcCC-Ccee--ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcC--CCcceEE--EcCCC
Q psy952 17 PWLIFSN--KYYVRNMSLDA-TQYS--LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVG--STEKERV--IRHDS 87 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g-~~~~--~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~i--~~~~~ 87 (573)
.+|+++. .+.|+.++++. .... ........+.+|+|++.++.||++....+.|..++++ +...+.+ +...
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-
Confidence 4666663 46888888862 2222 2233455688999999999999999887888888876 4333322 2222
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcC-CCceeE--eccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC--
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELD-GTNRKT--LKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG-- 162 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ld-g~~~~~--l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG-- 162 (573)
..|.+|++++.++.||++....+.|.+.+++ |...+. .+.....|.+++++|...+||+++.. ...|...+++.
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-QDRICLFTVSDDG 162 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-GTEEEEEEECTTS
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-CCEEEEEEecCCC
Confidence 3899999999888999999888889998883 322222 22455569999999988899999843 45677777764
Q ss_pred CCcE----EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC--CcE---EEEEeCC----ccceeEEEeee-
Q psy952 163 SNFT----RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG--KHK---HIVISGQ----KVPHVFALTLF- 228 (573)
Q Consensus 163 ~~~~----~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG--~~~---~~l~~~~----~~~~p~~ia~~- 228 (573)
.... .+. ......|.++++++.+.+||++....+.|..++++. ... ..+.... ....|.+|++.
T Consensus 163 ~~~~~~~~~~~--~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 163 HLVAQDPAEVT--TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp CEEEEEEEEEE--CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred ceeeecccccc--cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 2222 122 233457889999998889999998889999999864 222 1222111 02356678874
Q ss_pred -CCeEEEecCCCCceEEEecc
Q psy952 229 -EDHIYWTDWNTKSINRADKF 248 (573)
Q Consensus 229 -~~~lywtd~~~~~I~~~~~~ 248 (573)
+.+||++....+.|...+..
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEecCCCEEEEEEEc
Confidence 45799998888888877754
No 88
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.34 E-value=6.2e-10 Score=108.08 Aligned_cols=195 Identities=11% Similarity=0.048 Sum_probs=138.8
Q ss_pred cceEEEEEEcCCCEEEEEEC--CCCeEEEEEcCCCcceEEEc-CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc
Q psy952 45 LNVVAMDFHYKENRFYFADV--AAKTIYRSRVGSTEKERVIR-HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN 121 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~i~~-~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~ 121 (573)
..+.||+|++. ++||++.. ..+.|.++++........+. .....++|++++ +++||+++...+.|.++++....
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 35789999965 79999975 46799999998654433332 222355677776 78999999999999999987433
Q ss_pred -eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecC---CCCCCCceEEEeccCCeEEEEeCCC
Q psy952 122 -RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE---DDIAWPNALTLDYFTERLYWADAHL 197 (573)
Q Consensus 122 -~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~---~~l~~P~glaiD~~~~~LYw~D~~~ 197 (573)
...+-.+ .|.|+.|.+..++||+++ + ..+|..++........-+... ..+..|++|++. +++||++.+..
T Consensus 98 v~~~i~~g--~~~g~glt~Dg~~l~vs~-g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~ 171 (266)
T 2iwa_A 98 NIKNFTHQ--MKDGWGLATDGKILYGSD-G-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQT 171 (266)
T ss_dssp EEEEEECC--SSSCCEEEECSSSEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS
T ss_pred EEEEEECC--CCCeEEEEECCCEEEEEC-C-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCC
Confidence 3333223 466677777788999998 4 578999988765433322101 134468898877 67999999999
Q ss_pred CeEEEEeCCCCcE-EEEEeCC-----------ccceeEEEeee--CCeEEEecCCCCceEEEecc
Q psy952 198 DYIASVDLDGKHK-HIVISGQ-----------KVPHVFALTLF--EDHIYWTDWNTKSINRADKF 248 (573)
Q Consensus 198 ~~I~~~~~dG~~~-~~l~~~~-----------~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~ 248 (573)
+.|.++|+..... ..|.... ....|.||++. +++||+|.....+|+.++..
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 9999999965544 4443221 01368999996 46899999999999988743
No 89
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.30 E-value=2.6e-09 Score=109.90 Aligned_cols=244 Identities=11% Similarity=0.011 Sum_probs=150.9
Q ss_pred CEEEEEec--c----cEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEEC---------CCCeEEEEEcCCCcc-e
Q psy952 17 PWLIFSNK--Y----YVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADV---------AAKTIYRSRVGSTEK-E 80 (573)
Q Consensus 17 ~~l~~s~~--~----~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~-~ 80 (573)
.++++++. . .|.+++++.......++....| +|++.+.+++||+++. ..+.|.++++..... .
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~ 111 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA 111 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE
Confidence 45666653 2 6788988765543333334457 9999999999999985 246788998864332 2
Q ss_pred EEEcC-C-----CCCcceeEEeecCCcEEEEeCC-CCeEEEEEcCCCceeEe-ccCCCCcceEEEeCCC-----------
Q psy952 81 RVIRH-D-----SHGLEGLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRKTL-KTAIQDPRGITLHPGI----------- 141 (573)
Q Consensus 81 ~i~~~-~-----~~~p~glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~~l-~~~~~~P~~Iavdp~~----------- 141 (573)
.+... . ...|.++++++.++.||+++.. .+.|.+++ ........ +. -|..+.+.|..
T Consensus 112 ~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~dg 187 (373)
T 2mad_H 112 DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS---SPTCYHIHPGAPSTFYLLCAQG 187 (373)
T ss_pred EEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC---CCceEEEEeCCCceEEEEcCCC
Confidence 22211 0 2469999999999999999865 68899998 65433222 21 11122222222
Q ss_pred -------------------------------------ceEEEEecCCcCeEEEEeccCCCcEEEEec---C----CCCCC
Q psy952 142 -------------------------------------GYVYFSSWNLQAYIGKIGMDGSNFTRILTH---E----DDIAW 177 (573)
Q Consensus 142 -------------------------------------g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~---~----~~l~~ 177 (573)
+.+||... ...+.++++.+...+++... . .....
T Consensus 188 ~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~ 265 (373)
T 2mad_H 188 GLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY--SGKILQADISAAGATNKAPIDALSGGRKADTWR 265 (373)
T ss_pred CEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC--CceEEEEeccCCcceEeeeeeecCCccccccee
Confidence 22233221 23445555543322221100 0 01113
Q ss_pred Cce---EEEeccCCeEEEEeC---------CCCeEEEEeCCCCcE-EEEEeCCccceeEEEeee--CC-eEEEecCCCCc
Q psy952 178 PNA---LTLDYFTERLYWADA---------HLDYIASVDLDGKHK-HIVISGQKVPHVFALTLF--ED-HIYWTDWNTKS 241 (573)
Q Consensus 178 P~g---laiD~~~~~LYw~D~---------~~~~I~~~~~dG~~~-~~l~~~~~~~~p~~ia~~--~~-~lywtd~~~~~ 241 (573)
|.| +++++++++||++.. ..+.|..+|.....+ ..|..+ ..|.+|++. +. .||.+.+..+.
T Consensus 266 p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 266 PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred cCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCe
Confidence 666 899999999999854 235799999876554 344323 258888884 55 68888888999
Q ss_pred eEEEeccCCcceEEEcccCCCceeeeeee
Q psy952 242 INRADKFNGRDYRVLRNTTHRPYDIHVYH 270 (573)
Q Consensus 242 I~~~~~~~g~~~~~l~~~~~~p~~i~v~~ 270 (573)
|..++..+++.+..+...-..|.+|.++.
T Consensus 343 V~ViD~~t~~vv~~i~~vG~~P~~~~~~~ 371 (373)
T 2mad_H 343 LHIYDAGAGDQDQSTVELGSGPQVLSVMN 371 (373)
T ss_pred EEEEECCCCCEEeeecCCCCCCcEEEEcc
Confidence 99999888888777443345788776643
No 90
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.29 E-value=3.1e-09 Score=110.87 Aligned_cols=245 Identities=13% Similarity=0.121 Sum_probs=172.9
Q ss_pred CCEEEEEec--ccEEEEEcCCCceeecc------cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC
Q psy952 16 KPWLIFSNK--YYVRNMSLDATQYSLVH------QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS 87 (573)
Q Consensus 16 ~~~l~~s~~--~~I~~i~l~g~~~~~~~------~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~ 87 (573)
...++++.. +.|+.+++......... .....+.++++. .++.+|++....+.|+.++++.......+....
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP-EHNELWVSQMQANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG-GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc-CCCEEEEEECCCCEEEEEECCCceEEEEEcCCC
Confidence 556666653 46999999865443321 223457789995 578899999888999999997654433343344
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCC------cCeEEEEecc
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL------QAYIGKIGMD 161 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~------~~~I~r~~ld 161 (573)
..|.++++++.++.||++....+.|.+.++........+.....|.+++++|...+||.+..+. ...|...++.
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 6899999999889999999888899999987655444444445699999999888898887531 4578888886
Q ss_pred CCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEecCCC
Q psy952 162 GSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNT 239 (573)
Q Consensus 162 G~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~ 239 (573)
.......+ ..-..|.++++++.++.||++....+.|...+++.......+.. ...|.++++. +..||++....
T Consensus 292 ~~~~~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 292 KEKLIDTI---GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV--FDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp TTEEEEEE---EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEECCC
T ss_pred CCcEEeec---cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC--CCCCCeEEEcCCCCEEEEEecCC
Confidence 54433333 11236789999988889999999999999999986554433332 3468888885 45688887654
Q ss_pred --------------CceEEEeccCCcceEEEcccCCCceeee
Q psy952 240 --------------KSINRADKFNGRDYRVLRNTTHRPYDIH 267 (573)
Q Consensus 240 --------------~~I~~~~~~~g~~~~~l~~~~~~p~~i~ 267 (573)
+.|+..+..+++....+.. ...|.+++
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~ 407 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLD 407 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEE
T ss_pred CccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEE
Confidence 4788888777766655543 23444444
No 91
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.29 E-value=2.3e-09 Score=107.31 Aligned_cols=225 Identities=8% Similarity=-0.014 Sum_probs=150.1
Q ss_pred ecccEEEEEcCCCceeecccCCc---ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC-C----CCcceeE
Q psy952 23 NKYYVRNMSLDATQYSLVHQDLL---NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD-S----HGLEGLA 94 (573)
Q Consensus 23 ~~~~I~~i~l~g~~~~~~~~~~~---~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~-~----~~p~gla 94 (573)
..+.|+.+++........+.... .+.+++|++.++.||++....+.|+.+++.+......+..+ . ..|.+++
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceE
Confidence 35789999987655433222222 58899999988899999998899999998765443323222 1 2789999
Q ss_pred EeecCCcEEEEeC-----------CCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCC
Q psy952 95 VDWVGRKLYWLDR-----------HSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS 163 (573)
Q Consensus 95 vD~~~~~LY~td~-----------~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~ 163 (573)
+++.++.||+++. ..+.|.+.++.+......+.....|.+++++|...+||+++ ..|...++...
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----~~i~~~d~~~~ 164 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG----RDLHVMDPEAG 164 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES----SSEEEEETTTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC----CeEEEEECCCC
Confidence 9998889999962 35789999997655444444455699999999888899884 23444444322
Q ss_pred CcEEEE------------------------------------------------------ec----------CCCCCCCc
Q psy952 164 NFTRIL------------------------------------------------------TH----------EDDIAWPN 179 (573)
Q Consensus 164 ~~~~l~------------------------------------------------------~~----------~~~l~~P~ 179 (573)
.....+ .. ......|.
T Consensus 165 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 244 (337)
T 1pby_B 165 TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF 244 (337)
T ss_dssp EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEE
T ss_pred cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCcee
Confidence 111111 00 00112456
Q ss_pred eEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 180 ALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 180 glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
++++++.+.+||++ .+.|..+++........+.. -..|.++++. +.+||++ ...+.|...+..+++.+..+.
T Consensus 245 ~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 245 STAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCCEEEEEE
T ss_pred eEEECCCCCEEEEe---CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEEE-cCCCcEEEEECcCCcEEEEEE
Confidence 78888888888888 37888888876544333332 2367788874 4568887 446788888877777666553
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.29 E-value=1.6e-09 Score=117.27 Aligned_cols=238 Identities=9% Similarity=-0.014 Sum_probs=163.9
Q ss_pred CCCEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEc--CCCcceEEEcCCCCCc
Q psy952 15 IKPWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRV--GSTEKERVIRHDSHGL 90 (573)
Q Consensus 15 ~~~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~--~g~~~~~i~~~~~~~p 90 (573)
+...++++. .+.|..+++...+....+.....+.+++|++.+++||.++.. +.|..+++ ........+..+ ..|
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~~g-~~p 224 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIKIG-IEA 224 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEECC-SEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEecC-CCc
Confidence 455677776 367999998765543333322338899999999999999987 89999999 332222223333 579
Q ss_pred ceeEEee----cCCcEEEEeCCCCeEEEEEcCCCceeEecc--C----------CCCcceEEEeCCCceEEEEecCCcCe
Q psy952 91 EGLAVDW----VGRKLYWLDRHSKQLDVAELDGTNRKTLKT--A----------IQDPRGITLHPGIGYVYFSSWNLQAY 154 (573)
Q Consensus 91 ~glavD~----~~~~LY~td~~~~~I~~~~ldg~~~~~l~~--~----------~~~P~~Iavdp~~g~LYwtd~~~~~~ 154 (573)
.+|+|++ .++.||+++...+.|.+++.........+. + ...+.+|+++|..+.+|++.. ...+
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-~~g~ 303 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-ETGK 303 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-TTTE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-CCCe
Confidence 9999998 899999999878899999876443322221 1 125679999998888888874 4678
Q ss_pred EEEEeccCCC-cE-EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCcccee-EEEee-e--
Q psy952 155 IGKIGMDGSN-FT-RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHV-FALTL-F-- 228 (573)
Q Consensus 155 I~r~~ldG~~-~~-~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p-~~ia~-~-- 228 (573)
|...++.... .. ..+ ..-.+|.++++++++++||++....++|..++.........+.....+|| .++.+ .
T Consensus 304 i~vvd~~~~~~l~~~~i---~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~ 380 (543)
T 1nir_A 304 VLLVNYKDIDNLTVTSI---GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPK 380 (543)
T ss_dssp EEEEECTTSSSCEEEEE---ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETT
T ss_pred EEEEEecCCCcceeEEe---ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCC
Confidence 8888876432 22 122 23457999999999999999998889999999875544333332224565 24443 2
Q ss_pred CCeEEEecC-CCCceEEEeccC-------CcceEEEcc
Q psy952 229 EDHIYWTDW-NTKSINRADKFN-------GRDYRVLRN 258 (573)
Q Consensus 229 ~~~lywtd~-~~~~I~~~~~~~-------g~~~~~l~~ 258 (573)
.+.+|+|.. ..++|..++..+ ++.+++|..
T Consensus 381 ~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 381 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 367888864 567888887665 455555543
No 93
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.28 E-value=1.3e-09 Score=105.08 Aligned_cols=180 Identities=12% Similarity=0.211 Sum_probs=126.0
Q ss_pred cccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-e--EEEcCC------CCCccee
Q psy952 24 KYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-E--RVIRHD------SHGLEGL 93 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~--~i~~~~------~~~p~gl 93 (573)
...|++++++|.... +.+.+...+.||+++ .++.+|+++...++|+.+.++.... . ..+... ....+||
T Consensus 48 ~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGL 126 (255)
T 3qqz_A 48 PAAIVEMTTNGDLIRTIPLDFVKDLETIEYI-GDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGL 126 (255)
T ss_dssp TEEEEEEETTCCEEEEEECSSCSSEEEEEEC-STTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEE
T ss_pred CCeEEEEeCCCCEEEEEecCCCCChHHeEEe-CCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceE
Confidence 467999999976443 335666789999998 5678888988888999888765332 1 111111 1234999
Q ss_pred EEeecCCcEEEEeCCCC-eEEEEE--cCCCceeEec-------cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCC
Q psy952 94 AVDWVGRKLYWLDRHSK-QLDVAE--LDGTNRKTLK-------TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS 163 (573)
Q Consensus 94 avD~~~~~LY~td~~~~-~I~~~~--ldg~~~~~l~-------~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~ 163 (573)
|+|+.+++||++..... .|+.++ +.+...+++. ..+..+.+|++||.++.||+... ....|..++++|.
T Consensus 127 A~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~-~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 127 AYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSH-ESRALQEVTLVGE 205 (255)
T ss_dssp EEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEET-TTTEEEEECTTCC
T ss_pred EEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEEC-CCCeEEEEcCCCC
Confidence 99999999999886544 677776 2222223321 14567999999999999999974 4678999999998
Q ss_pred CcEEEEecC-------CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCC
Q psy952 164 NFTRILTHE-------DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGK 208 (573)
Q Consensus 164 ~~~~l~~~~-------~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~ 208 (573)
.+..+.- . ..+..|.|||+|+ +++||++.. .+.++++..+++
T Consensus 206 ~~~~~~L-~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE-~n~~y~f~~~~~ 254 (255)
T 3qqz_A 206 VIGEMSL-TKGSRGLSHNIKQAEGVAMDA-SGNIYIVSE-PNRFYRFTPQSS 254 (255)
T ss_dssp EEEEEEC-STTGGGCSSCCCSEEEEEECT-TCCEEEEET-TTEEEEEEC---
T ss_pred EEEEEEc-CCccCCcccccCCCCeeEECC-CCCEEEEcC-CceEEEEEecCC
Confidence 5544431 2 2357899999996 568999954 468998877643
No 94
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.27 E-value=9.4e-10 Score=106.77 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=131.0
Q ss_pred CEEEEEec----ccEEEEEcCCCcee--ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFSNK----YYVRNMSLDATQYS--LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~~----~~I~~i~l~g~~~~--~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
..|++++. +.|+++++...+.. +.+.....+.|++++ +++||+++...+.|++++++......-+..+ .|
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g--~~ 107 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ--MK 107 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC--SS
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECC--CC
Confidence 57888763 68999999865543 223333456778887 6899999999999999998754332223333 45
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee-Eecc-----CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK-TLKT-----AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~-~l~~-----~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
.|+.+.+.+++||+++ +.++|.+++....... .+.- .+..|++|++. .|.||.+.|. ...|.++++....
T Consensus 108 ~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~-~~~V~vID~~tg~ 183 (266)
T 2iwa_A 108 DGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ-TDCIARISAKDGT 183 (266)
T ss_dssp SCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-SSEEEEEETTTCC
T ss_pred CeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCC-CCeEEEEECCCCc
Confidence 6666666689999999 6789999998764432 3321 23458888887 5799999875 5789999996544
Q ss_pred cEEEEecCC------------CCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 165 FTRILTHED------------DIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 165 ~~~l~~~~~------------~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
....+. .. ....|+||++++.+++||++....++|+.+++..
T Consensus 184 V~~~I~-~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 184 LLGWIL-LPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEE-CHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEEEE-CCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 333331 11 2257899999999999999999999999888654
No 95
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.24 E-value=6.3e-09 Score=106.56 Aligned_cols=246 Identities=9% Similarity=0.046 Sum_probs=152.6
Q ss_pred CEEEEEec-------ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEEC---------CCCeEEEEEcCCCcc-
Q psy952 17 PWLIFSNK-------YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADV---------AAKTIYRSRVGSTEK- 79 (573)
Q Consensus 17 ~~l~~s~~-------~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~- 79 (573)
.++++++. +.|+++++...+....+.....| +|++++..++||+++. ..+.|..+++.....
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~ 94 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE 94 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE
Confidence 46777653 47899998755544334444567 9999999999999984 235688998865332
Q ss_pred eEEEcC-----CCCCcceeEEeecCCcEEEEeCC-CCeEEEEEcCCCceeEe-ccC-C-----CCc----ceEEEeCCCc
Q psy952 80 ERVIRH-----DSHGLEGLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRKTL-KTA-I-----QDP----RGITLHPGIG 142 (573)
Q Consensus 80 ~~i~~~-----~~~~p~glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~~l-~~~-~-----~~P----~~Iavdp~~g 142 (573)
..+... ....|.+|++++.++.||+++.. .+.|.++++........ +.. . ..| .-+++.+...
T Consensus 95 ~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 95 KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp EEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSS
T ss_pred EEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCc
Confidence 223211 12579999999999999999975 67899999875443222 211 0 122 3355666554
Q ss_pred eEEEEecCCc------------------------------------CeEEEEeccCCCcEEEEecC--C-----CCCCCc
Q psy952 143 YVYFSSWNLQ------------------------------------AYIGKIGMDGSNFTRILTHE--D-----DIAWPN 179 (573)
Q Consensus 143 ~LYwtd~~~~------------------------------------~~I~r~~ldG~~~~~l~~~~--~-----~l~~P~ 179 (573)
.+||+..... +.|+.+++.+....++.... . ....|.
T Consensus 175 ~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 175 LLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 5555431111 12333333222211111000 0 001244
Q ss_pred e---EEEeccCCeEEEEeC----------CCCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEEecCCCCceEE
Q psy952 180 A---LTLDYFTERLYWADA----------HLDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTDWNTKSINR 244 (573)
Q Consensus 180 g---laiD~~~~~LYw~D~----------~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lywtd~~~~~I~~ 244 (573)
| +++++.+++||++.. ..+.|..+++....+...+... . |.+|++ ++.+||.+.+ +.|..
T Consensus 255 g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~--~-p~~ia~spdg~~l~v~n~--~~v~v 329 (361)
T 2oiz_A 255 GYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR--D-ALSMTIDQQRNLMLTLDG--GNVNV 329 (361)
T ss_dssp CSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT--T-CCEEEEETTTTEEEEECS--SCEEE
T ss_pred CeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC--C-eeEEEECCCCCEEEEeCC--CeEEE
Confidence 4 899999999999854 1357999998765443333332 2 889988 4678999986 88999
Q ss_pred EeccCC--cceEEEcccCCCceeeee
Q psy952 245 ADKFNG--RDYRVLRNTTHRPYDIHV 268 (573)
Q Consensus 245 ~~~~~g--~~~~~l~~~~~~p~~i~v 268 (573)
++..++ +.+..+...-..|.+|++
T Consensus 330 ~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 330 YDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp EECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred EECCCCcceeeEEeccCCCCcEEEEe
Confidence 998888 766666444557887765
No 96
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.23 E-value=4.4e-10 Score=118.39 Aligned_cols=206 Identities=12% Similarity=0.093 Sum_probs=131.3
Q ss_pred ceeecccCCcceEEEEEEcCCC-EEEEEECCCCeEEEEEcCCCc-ceEE------EcCC-----CCCcceeEEeec---C
Q psy952 36 QYSLVHQDLLNVVAMDFHYKEN-RFYFADVAAKTIYRSRVGSTE-KERV------IRHD-----SHGLEGLAVDWV---G 99 (573)
Q Consensus 36 ~~~~~~~~~~~~~~v~~d~~~~-~ly~~d~~~~~I~~~~~~g~~-~~~i------~~~~-----~~~p~glavD~~---~ 99 (573)
.+++++.++..|.+|++.+... +||+++.. ++|++++.+|.. .+.+ +..+ ...+.|||+++. +
T Consensus 5 ~v~~va~gL~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 4566777899999999998764 79999874 789998876642 1111 1111 346788999873 6
Q ss_pred CcEEEEeCC--C----------CeEEEEEcCCC--------ceeEecc-----CCCCcceEEEeCCCceEEEEecCC---
Q psy952 100 RKLYWLDRH--S----------KQLDVAELDGT--------NRKTLKT-----AIQDPRGITLHPGIGYVYFSSWNL--- 151 (573)
Q Consensus 100 ~~LY~td~~--~----------~~I~~~~ldg~--------~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~~--- 151 (573)
+.||++.+. . .+|.++.+... ..++|++ .......|+++| .|+||++--..
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMIT 162 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCC
Confidence 789987532 1 37888887531 2344442 223477899999 68999994211
Q ss_pred -------------cCeEEEEeccCCC-------------------cEEEEecCCCCCCCceEEEeccCC------eEEEE
Q psy952 152 -------------QAYIGKIGMDGSN-------------------FTRILTHEDDIAWPNALTLDYFTE------RLYWA 193 (573)
Q Consensus 152 -------------~~~I~r~~ldG~~-------------------~~~l~~~~~~l~~P~glaiD~~~~------~LYw~ 193 (573)
.++|.|++.||.. +..|. ..++..|.||++|+..+ +||.+
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~--a~G~RNp~gla~dp~tg~~~G~l~~~~~ 240 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVF--AHGLHDPGRCAVDRHPTDININLTILCS 240 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEE--EECCSSCCBEEEESSCSSTTCSEEEEEE
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEE--EECCCCcceEEECCCCCCcccceEEEec
Confidence 3589999999941 12344 47899999999998744 77888
Q ss_pred eC-CC----CeEEEEeCCCCc----EEEEEeCC-ccceeEEEeeeCC--------eEEEecCCCCceEEEec
Q psy952 194 DA-HL----DYIASVDLDGKH----KHIVISGQ-KVPHVFALTLFED--------HIYWTDWNTKSINRADK 247 (573)
Q Consensus 194 D~-~~----~~I~~~~~dG~~----~~~l~~~~-~~~~p~~ia~~~~--------~lywtd~~~~~I~~~~~ 247 (573)
|. +. ..|..+.. |.+ .-++.-.. .-..|.|++++.+ .+|++++. ++|.++..
T Consensus 241 D~~G~~~~~~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~ 310 (463)
T 2wg3_C 241 DSNGKNRSSARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQ 310 (463)
T ss_dssp CC------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC
T ss_pred ccCCCCCCCCeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEe
Confidence 86 22 23444422 221 11111111 0136889998644 48899987 77888864
No 97
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.22 E-value=8.1e-12 Score=85.14 Aligned_cols=40 Identities=50% Similarity=1.088 Sum_probs=35.1
Q ss_pred CCCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCC
Q psy952 522 NITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHC 562 (573)
Q Consensus 522 ~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c 562 (573)
+..|.+++|+|.++ +|||.+|+|||..||.|||||....|
T Consensus 3 ~~~C~~~~F~C~~g-~CI~~~~~CDG~~DC~DgSDE~~c~C 42 (45)
T 1d2l_A 3 PPQCQPGEFACANS-RCIQERWKCDGDNDCLDNSDEAPALC 42 (45)
T ss_dssp CCBTTBTCEEETTT-EEECGGGTTTSSCTTTTCSTTSTTTC
T ss_pred CCcCCCCceEcCCC-CeEehhhccCCCCCCCCCCCCCCCcC
Confidence 35688899999999 99999999999999999999994333
No 98
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=1.3e-09 Score=111.42 Aligned_cols=252 Identities=9% Similarity=-0.037 Sum_probs=160.7
Q ss_pred CCCceeeCCC-CCCEEEEEec--c----cEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEEC---------CCCe
Q psy952 5 DESTCKRRDS-IKPWLIFSNK--Y----YVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADV---------AAKT 68 (573)
Q Consensus 5 dg~~C~~~~~-~~~~l~~s~~--~----~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~---------~~~~ 68 (573)
++.+|..... ....+++++. + .|..|+++..+....+.....| ++++++..++||+++. ..+.
T Consensus 19 ~~~~~~~~~~~~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 19 DGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp CCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEE
T ss_pred CccccccCCCCCCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCE
Confidence 5667754332 2356777764 2 7888998876554333333457 9999999999999984 3568
Q ss_pred EEEEEcCCCcc-eEEEcC-C-----CCCcceeEEeecCCcEEEEeCC-CCeEEE--EEcCCCceeEecc-C---------
Q psy952 69 IYRSRVGSTEK-ERVIRH-D-----SHGLEGLAVDWVGRKLYWLDRH-SKQLDV--AELDGTNRKTLKT-A--------- 128 (573)
Q Consensus 69 I~~~~~~g~~~-~~i~~~-~-----~~~p~glavD~~~~~LY~td~~-~~~I~~--~~ldg~~~~~l~~-~--------- 128 (573)
|..+++..... ..|... + ...|.+|++++.+++||+++.. .+.|.+ +++.. .+++-. +
T Consensus 98 VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~ 175 (368)
T 1mda_H 98 VEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAA 175 (368)
T ss_dssp EEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEET
T ss_pred EEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCC
Confidence 99999876543 333221 0 2579999999999999999865 466777 55532 111100 0
Q ss_pred -------------------------------------CCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec
Q psy952 129 -------------------------------------IQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH 171 (573)
Q Consensus 129 -------------------------------------~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~ 171 (573)
...|. + .+..+.+||+.. +.|..+++.+...+++...
T Consensus 176 ~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~---~~V~viD~~~~~~~v~~~~ 249 (368)
T 1mda_H 176 ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA---SSILQGDIPAAGATMKAAI 249 (368)
T ss_dssp TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS---SCCEEEECCSSCCEEECCC
T ss_pred eEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC---CEEEEEECCCCcceEEEEE
Confidence 01132 2 444566666663 5677777765443332200
Q ss_pred C-------CCCCCCce---EEEeccCCeEEEEeC---C-----CCeEEEEeCCCCcE-EEEEeCCccceeEEEeee--CC
Q psy952 172 E-------DDIAWPNA---LTLDYFTERLYWADA---H-----LDYIASVDLDGKHK-HIVISGQKVPHVFALTLF--ED 230 (573)
Q Consensus 172 ~-------~~l~~P~g---laiD~~~~~LYw~D~---~-----~~~I~~~~~dG~~~-~~l~~~~~~~~p~~ia~~--~~ 230 (573)
. .....|.| +++++++++||++.. + .+.+..+|+....+ ..|..+ ..|.+|++. +.
T Consensus 250 ~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~ 326 (368)
T 1mda_H 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGA 326 (368)
T ss_dssp CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSS
T ss_pred EeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC---CCcceEEECCCCC
Confidence 0 01123555 899999999999865 3 24556888765433 222222 269999984 44
Q ss_pred eEEEecC-CCCceEEEeccCCcceEEEcccCCCceeeeee
Q psy952 231 HIYWTDW-NTKSINRADKFNGRDYRVLRNTTHRPYDIHVY 269 (573)
Q Consensus 231 ~lywtd~-~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~ 269 (573)
++|++.. ..+.|..++..+++.+..+..+ ..|.+|.+-
T Consensus 327 ~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~i~~~ 365 (368)
T 1mda_H 327 SDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPESLSVQ 365 (368)
T ss_dssp CEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCEEECC
T ss_pred EEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCEEEee
Confidence 6999988 7999999999888877777543 478887654
No 99
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.22 E-value=6.3e-09 Score=105.40 Aligned_cols=163 Identities=10% Similarity=0.064 Sum_probs=112.5
Q ss_pred cccEEEEEcCCC--c-eeecccC------CcceEEEEEEcC---CCEEEEEECC--CCe--EEEEEcCCCcceEE---Ec
Q psy952 24 KYYVRNMSLDAT--Q-YSLVHQD------LLNVVAMDFHYK---ENRFYFADVA--AKT--IYRSRVGSTEKERV---IR 84 (573)
Q Consensus 24 ~~~I~~i~l~g~--~-~~~~~~~------~~~~~~v~~d~~---~~~ly~~d~~--~~~--I~~~~~~g~~~~~i---~~ 84 (573)
...|++++++.. . .++...+ ..+|.||++... +.+||+++.. ... |++++.++.....+ -.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 567999998732 2 2222333 237999999762 3479999876 334 56666655432222 12
Q ss_pred CCCCCcceeEEeecCCcEEEEeC-----------------CCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEE
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDR-----------------HSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFS 147 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~-----------------~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwt 147 (573)
..+..|+++++|. .+.+|+++. ..++|++++.. ..+++..++..|+|||++|...+||++
T Consensus 162 ~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 162 KLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp TTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred CCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 3478999999996 567777764 23578887763 456677889999999999998999999
Q ss_pred ecCCcCeEEEEeccCCC----cEEEEecCCCCCCCceEEEeccCCeEEEEe
Q psy952 148 SWNLQAYIGKIGMDGSN----FTRILTHEDDIAWPNALTLDYFTERLYWAD 194 (573)
Q Consensus 148 d~~~~~~I~r~~ldG~~----~~~l~~~~~~l~~P~glaiD~~~~~LYw~D 194 (573)
+.. ..+|++.++++.. ++++. . -..|.||++|.++++||++.
T Consensus 239 dt~-~~~I~~~~~~~~g~l~~~~~~~--~--~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 239 ELL-AHKIHVYEKHANWTLTPLRVLS--F--DTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EGG-GTEEEEEEECTTSCEEEEEEEE--C--SSEEEEEEECTTTCCEEEEE
T ss_pred eCC-CCeEEEEEECCCCcEecCEEEe--C--CCCCceEEEeCCCCcEEEEe
Confidence 964 6789999886432 22221 2 35799999996468999965
No 100
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.21 E-value=1.4e-09 Score=114.83 Aligned_cols=226 Identities=12% Similarity=0.131 Sum_probs=148.6
Q ss_pred CCCEEEEEecc--cEEEEEcCCCceeec--cc-------CCcceEEEEEEcC---CCEEEEEECC------------CCe
Q psy952 15 IKPWLIFSNKY--YVRNMSLDATQYSLV--HQ-------DLLNVVAMDFHYK---ENRFYFADVA------------AKT 68 (573)
Q Consensus 15 ~~~~l~~s~~~--~I~~i~l~g~~~~~~--~~-------~~~~~~~v~~d~~---~~~ly~~d~~------------~~~ 68 (573)
+..-|+++.+. .|+++...+...+.+ +. +...+.+|++++. ++.||++... ..+
T Consensus 36 pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~ 115 (454)
T 1cru_A 36 PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTI 115 (454)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccE
Confidence 44557777754 599888753333221 11 3455789999987 8999999863 358
Q ss_pred EEEEEcCCC-----cceEEEc----CCCCCcceeEEeecCCcEEEEeCC-------------------------------
Q psy952 69 IYRSRVGST-----EKERVIR----HDSHGLEGLAVDWVGRKLYWLDRH------------------------------- 108 (573)
Q Consensus 69 I~~~~~~g~-----~~~~i~~----~~~~~p~glavD~~~~~LY~td~~------------------------------- 108 (573)
|+|+.++.. ..++|+. ...+.+.+|++++ .++||++-..
T Consensus 116 v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~ 194 (454)
T 1cru_A 116 IRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHT 194 (454)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTT
T ss_pred EEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCC
Confidence 999987542 2334442 2346789999997 5689998421
Q ss_pred -CCeEEEEEcCCC-----------ceeEeccCCCCcceEEEeCCCceEEEEecCCcC--eEEEEec---------cC---
Q psy952 109 -SKQLDVAELDGT-----------NRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQA--YIGKIGM---------DG--- 162 (573)
Q Consensus 109 -~~~I~~~~ldg~-----------~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~--~I~r~~l---------dG--- 162 (573)
.++|.+++.+|+ ..+++..++.+|.+|++|| .|.||+++.+... .|.++.. .|
T Consensus 195 ~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~~~~dein~i~~G~nYGWP~~~G~~~ 273 (454)
T 1cru_A 195 YMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGPNSDDEINLIVKGGNYGWPNVAGYKD 273 (454)
T ss_dssp CSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECSSSCEEEEECCTTCBCCTTTCSSSSS
T ss_pred CCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCCCCCeEEEEecCCCCCCCCceecCcc
Confidence 478999999998 4455667899999999999 7999999975321 2322211 01
Q ss_pred ------------------------CCc--------------E----EEEec--------------------CCCCCCCce
Q psy952 163 ------------------------SNF--------------T----RILTH--------------------EDDIAWPNA 180 (573)
Q Consensus 163 ------------------------~~~--------------~----~l~~~--------------------~~~l~~P~g 180 (573)
... . .++.. ......|.|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ap~G 353 (454)
T 1cru_A 274 DSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWPTVAPSS 353 (454)
T ss_dssp CSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGSSCCCBCC
T ss_pred cCccccccccccccccccccccCCcccCccccccccccccCCCcCCCceecccccccccccccccccccccccCccCcce
Confidence 000 0 00000 001234778
Q ss_pred EEEecc--------CCeEEEEeCCCCeEEEEeCCC--CcE----EEEEeCCccceeEEEeee-CCe-EEEecCCCCceEE
Q psy952 181 LTLDYF--------TERLYWADAHLDYIASVDLDG--KHK----HIVISGQKVPHVFALTLF-EDH-IYWTDWNTKSINR 244 (573)
Q Consensus 181 laiD~~--------~~~LYw~D~~~~~I~~~~~dG--~~~----~~l~~~~~~~~p~~ia~~-~~~-lywtd~~~~~I~~ 244 (573)
|++... .+.||+++...++|.++.+++ ... ..++. . ..+|..|++. ++. ||+++...+.|++
T Consensus 354 ~~fy~g~~~~~~~~~g~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~-~-~~R~~dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 354 AYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFK-S-NNRYRDVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp CEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSSSEEEEEEEESC-C-SSCEEEEEECTTSSCEEEEECSSCCEEC
T ss_pred eEEeCCCCccCcccCCcEEEeecCCCEEEEEEECCCCCeeeeeeeeecc-c-CCCceeEEECCCCCEEEEEECCCCCCcc
Confidence 988633 378999999999999999874 222 12222 2 4689999985 455 9999988888765
No 101
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.20 E-value=9.9e-12 Score=134.62 Aligned_cols=103 Identities=25% Similarity=0.488 Sum_probs=81.4
Q ss_pred ceecCCCcccCCCcccCCCCCCCCCCCCCCCccCCcCCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCCCCCCCC
Q psy952 415 EFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPLE 494 (573)
Q Consensus 415 ~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~~~C~~~~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~~~C~~c 494 (573)
.+.|..+.+++..+.||...+|.+.+++ | |...+|+|. ++.||+..++|||..||.|+||| ..
T Consensus 175 l~~C~~~~~~~~~h~~DagV~C~~~~~~----c----~~~~~~~C~---~~~ci~~~~~Cdg~~dC~d~sDE--~~---- 237 (565)
T 2xrc_A 175 LAECTFTKRRTMGYQDFADVVCYTQKAD----S----PMDDFFQCV---NGKYISQMKACDGINDCGDQSDE--LC---- 237 (565)
T ss_dssp GGGSEEECCCCCSSCCCCEEEBCCC-----------------CBCT---TSCBCCTTSTTSSSCCSSSSSSS--SS----
T ss_pred hhhcccCcccccccccCCceeccccccC----C----CCcCeeECC---CCCccCHHHcCCCcccCCCCccc--cc----
Confidence 5778877788888999999999877655 2 344569997 68999999999999999999998 33
Q ss_pred CCCCccCCCCCCCCCCCCcccccCCCCCCCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCCC
Q psy952 495 SLGSVCNGVNDCKDNITSDETHARCPSNITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ 564 (573)
Q Consensus 495 ~~~~~Cd~~~dC~dg~~~de~~~~C~~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~ 564 (573)
|. .|.+.+|+|.++ .||+..++|||..||.|||||. +|..
T Consensus 238 ------------------------C~---~c~~~~~~C~~~-~C~~~~~~cdG~~dC~~gsDE~--~C~~ 277 (565)
T 2xrc_A 238 ------------------------CK---ACQGKGFHCKSG-VCIPSQYQCNGEVDCITGEDEV--GCAG 277 (565)
T ss_dssp ------------------------BS---SCSSSCEEETTT-EEECGGGTTSSSCCSSSCTTSS--SCC-
T ss_pred ------------------------cc---ccCCCceecCCC-cccCccccCCCcccCCCCcccc--CcCC
Confidence 41 266778999999 8999999999999999999998 8864
No 102
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=7e-09 Score=105.65 Aligned_cols=181 Identities=13% Similarity=0.103 Sum_probs=124.1
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc-------c------eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeE
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE-------K------ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQL 112 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~-------~------~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I 112 (573)
.+.+++|++..+.||+++...+.|+.++++... . ..+.......|.++++++.++.||+++...+.|
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 357899999888999999988888888776432 1 122223346799999999888999999888899
Q ss_pred EEEEcCCCceeEec------cCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc--CCCcEEEEecCCCCCCCceEEEe
Q psy952 113 DVAELDGTNRKTLK------TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD--GSNFTRILTHEDDIAWPNALTLD 184 (573)
Q Consensus 113 ~~~~ldg~~~~~l~------~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld--G~~~~~l~~~~~~l~~P~glaiD 184 (573)
.+++++....+.+. .....|.+|+++|...+||+++......|....++ ....+.+..... -..|.+|+++
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~s 314 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIIT 314 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEEC
Confidence 99998754332222 23345889999999889999985423456665554 222222221022 4579999999
Q ss_pred ccCCeEEEEeCCCCeEEEEeCC--CCcEEEEEeCCccceeEEEee
Q psy952 185 YFTERLYWADAHLDYIASVDLD--GKHKHIVISGQKVPHVFALTL 227 (573)
Q Consensus 185 ~~~~~LYw~D~~~~~I~~~~~d--G~~~~~l~~~~~~~~p~~ia~ 227 (573)
+++++||++....+.|..+.+| ....+.+......+.|..|++
T Consensus 315 pdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 315 PNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp TTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 9999999999888877775544 333333322212567777765
No 103
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.18 E-value=1.6e-11 Score=82.77 Aligned_cols=40 Identities=38% Similarity=0.910 Sum_probs=35.0
Q ss_pred CCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCCC
Q psy952 523 ITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ 564 (573)
Q Consensus 523 ~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~ 564 (573)
..|.+++|+|.+..+|||..|+|||..||.|||||. +|..
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~--~C~~ 41 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEK--SCEG 41 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTT--TCCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCccc--CCCC
Confidence 457889999986339999999999999999999998 7853
No 104
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.18 E-value=8.7e-12 Score=81.58 Aligned_cols=36 Identities=39% Similarity=1.055 Sum_probs=33.6
Q ss_pred cCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 525 CPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 525 C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
|.+++|+|.++ +||+.+|+|||..||.|||||. +|+
T Consensus 2 C~~~~f~C~~g-~Ci~~~~~CDg~~DC~DgsDE~--~C~ 37 (37)
T 1ajj_A 2 CSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEE--NCA 37 (37)
T ss_dssp CCTTCEECTTS-CEECGGGTTSSSCCSTTCGGGT--TCC
T ss_pred CCCCceEcCCC-CeechhhccCCCCCCCCCcccc--CCC
Confidence 67889999999 9999999999999999999998 774
No 105
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.18 E-value=3.6e-10 Score=119.24 Aligned_cols=159 Identities=14% Similarity=0.177 Sum_probs=117.4
Q ss_pred CCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE--cC------CCCCcceeEEeec---CCcE
Q psy952 34 ATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI--RH------DSHGLEGLAVDWV---GRKL 102 (573)
Q Consensus 34 g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~--~~------~~~~p~glavD~~---~~~L 102 (573)
+-..++++.++..|.+|++++ +++||+++...++|++++..++..+++. .. +...+.|||+++. ++.|
T Consensus 16 gf~~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEE
T ss_pred CeEEEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEE
Confidence 445667778899999999997 5789999988889999987533333332 11 2345669999976 8999
Q ss_pred EEEeCC------------CCeEEEEEcCCC-----ceeEecc-----CCCCcceEEEeCCCceEEEEecCC---------
Q psy952 103 YWLDRH------------SKQLDVAELDGT-----NRKTLKT-----AIQDPRGITLHPGIGYVYFSSWNL--------- 151 (573)
Q Consensus 103 Y~td~~------------~~~I~~~~ldg~-----~~~~l~~-----~~~~P~~Iavdp~~g~LYwtd~~~--------- 151 (573)
|++.+. ..+|.++++++. ..++|+. ....+.+|+++| .|+||++....
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~ 173 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLF 173 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTT
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccc
Confidence 999853 357988887542 2344442 234599999999 68999995321
Q ss_pred ----------------------cCeEEEEeccCC-----------CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC
Q psy952 152 ----------------------QAYIGKIGMDGS-----------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD 198 (573)
Q Consensus 152 ----------------------~~~I~r~~ldG~-----------~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~ 198 (573)
.++|.|++.||+ ..+ ++ ...+..|.||++|+ .++||++|.+.+
T Consensus 174 ~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~e-i~--a~G~RNp~gla~dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 174 LPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSH-IY--TLGHRNPQGLAFTP-NGKLLQSEQGPN 249 (454)
T ss_dssp SCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECS-EE--EBCCSEEEEEEECT-TSCEEEEEECSS
T ss_pred cccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcce-EE--EECCCCcceEEECC-CCCEEEEecCCC
Confidence 368999999998 233 34 47889999999998 699999997654
No 106
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=99.17 E-value=5.2e-12 Score=88.13 Aligned_cols=39 Identities=44% Similarity=1.049 Sum_probs=35.9
Q ss_pred CCCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 522 NITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 522 ~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
+..|.+++|+|.+| +|||.+|+|||..||+|||||. +|.
T Consensus 4 p~~C~~~~F~C~nG-~CIp~~~~CDG~~DC~DgSDE~--~~~ 42 (52)
T 2m0p_A 4 PASCLDTQYTCDNH-QCISKNWVCDTDNDCGDGSDEK--NCN 42 (52)
T ss_dssp CCSSCSSEEECTTC-CEEETTSTTSSSCSSSSCHHHH--SCC
T ss_pred CCCCCCCceECCCC-CEEecCccCCCCCCCCCCCccc--cch
Confidence 46788999999999 9999999999999999999998 664
No 107
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=99.16 E-value=1.8e-11 Score=80.97 Aligned_cols=37 Identities=41% Similarity=1.064 Sum_probs=33.6
Q ss_pred cCCCceeeCC--CCceecCCcCcCCCCCCCCCCCCCCCCCCC
Q psy952 525 CPPHHLKCAN--TNICVEPYWLCDGDNDCGDMSDEDPLHCQQ 564 (573)
Q Consensus 525 C~~~~f~C~~--~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~ 564 (573)
|.+.+|+|.+ + +|||.+|+|||..||.|||||. +|++
T Consensus 1 C~~~~f~C~~~~g-~Cip~~~~CDg~~DC~dgsDE~--~C~~ 39 (39)
T 3dpr_E 1 CRIHEISCGAHST-QCIPVSWRCDGENDCDSGEDEE--NCGN 39 (39)
T ss_dssp CCTTTCCCSSSSS-CCCCTTSSSSSSCCSTTTTTST--TCCC
T ss_pred CCCCceecCCCCC-CEeCccccCCCcccCcCCcccc--cCCC
Confidence 5688999998 6 9999999999999999999998 8863
No 108
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.16 E-value=4.5e-09 Score=104.13 Aligned_cols=218 Identities=12% Similarity=0.020 Sum_probs=143.5
Q ss_pred CCEEEEEe--cccEEEEEcCCCce-eecccCC-------cceEEEEE---EcCCCEEEE-EEC------------CCCeE
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQY-SLVHQDL-------LNVVAMDF---HYKENRFYF-ADV------------AAKTI 69 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~~-~~~~~~~-------~~~~~v~~---d~~~~~ly~-~d~------------~~~~I 69 (573)
...+++++ ...|.++++++... .+.+..+ ..+.||.+ |+. ++||+ ++. ....|
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~g~~~~g~~~v 102 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFADQSSHGASSF 102 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTTSCCSSSCCEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccccccccCCCCEE
Confidence 45677787 57899999985433 3333332 25789999 776 88988 452 24679
Q ss_pred EEEEcC----CCcceEEEcC------------CCCCcceeEEeecCCcEEEEeCCC-CeEEEEEcCCCceeEec-c----
Q psy952 70 YRSRVG----STEKERVIRH------------DSHGLEGLAVDWVGRKLYWLDRHS-KQLDVAELDGTNRKTLK-T---- 127 (573)
Q Consensus 70 ~~~~~~----g~~~~~i~~~------------~~~~p~glavD~~~~~LY~td~~~-~~I~~~~ldg~~~~~l~-~---- 127 (573)
.+++++ +.....+--. ....+.+|++|. .+++|++++.. +.|.+++.+|+...++. .
T Consensus 103 ~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~ 181 (334)
T 2p9w_A 103 HSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNG 181 (334)
T ss_dssp EEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCS
T ss_pred EEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCc
Confidence 999998 3322211100 123588999995 78999999888 99999999998655543 1
Q ss_pred -CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE----ecCCCCCCCceE-EEeccCCeEEEEeCCCCeEE
Q psy952 128 -AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL----THEDDIAWPNAL-TLDYFTERLYWADAHLDYIA 201 (573)
Q Consensus 128 -~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~----~~~~~l~~P~gl-aiD~~~~~LYw~D~~~~~I~ 201 (573)
....+.|||++|....|++++. ..+|.++++.-..+..+- .....+..|.+| ++.+.+..||+++...+.+.
T Consensus 182 ~~~~G~nGIv~~pdg~~Liv~~~--~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~ 259 (334)
T 2p9w_A 182 GQRPGYSGITFDPHSNKLIAFGG--PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAIS 259 (334)
T ss_dssp SSCCSCSEEEEETTTTEEEEESS--SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEE
T ss_pred ccccCcceEEEeCCCCEEEEEcC--CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEE
Confidence 2234789999998888888884 788999999843321121 001256778895 77766666699998777888
Q ss_pred EEeCCCCcEEEEEeC--CccceeEEEee-------eCCeEEEecCC
Q psy952 202 SVDLDGKHKHIVISG--QKVPHVFALTL-------FEDHIYWTDWN 238 (573)
Q Consensus 202 ~~~~dG~~~~~l~~~--~~~~~p~~ia~-------~~~~lywtd~~ 238 (573)
..+.||-....+... ..+. +.|+++ -+++||+.+..
T Consensus 260 l~S~DgW~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 260 FRSWDNWKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EECSSTTSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECC
T ss_pred EECCCCcceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeee
Confidence 888888444333321 1021 344433 24678877643
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.16 E-value=1.7e-08 Score=105.10 Aligned_cols=223 Identities=13% Similarity=0.058 Sum_probs=159.0
Q ss_pred CEEEEEe--cccEEEEEcCCCceee-cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCccee
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSL-VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGL 93 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~-~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gl 93 (573)
..++++. ...|+.+++....... +......+.+++|++.++.||++....+.|+.+++........+.. ...|.++
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~ 259 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGL 259 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEE
Confidence 4455554 3688889987654432 2234456899999999999999998889999999875544333332 3568999
Q ss_pred EEeecCCcEEEEeC-------CCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE
Q psy952 94 AVDWVGRKLYWLDR-------HSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT 166 (573)
Q Consensus 94 avD~~~~~LY~td~-------~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~ 166 (573)
++++.++.||.+.. ..+.|.+.++........+.....|.+++++|...+||++... ...|...+++.....
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMC-CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETT-TTEEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecC-CCEEEEEECCCCcEE
Confidence 99988888988874 3568999998765544444333478999999987789999743 678888888755443
Q ss_pred EEEecCCCCCCCceEEEeccCCeEEEEeCCC--------------CeEEEEeCCCCcEEEEEeCCccceeEEEeee--CC
Q psy952 167 RILTHEDDIAWPNALTLDYFTERLYWADAHL--------------DYIASVDLDGKHKHIVISGQKVPHVFALTLF--ED 230 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~--------------~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~ 230 (573)
..+ .....|.++++++.+..||++.... +.|...++........+.. ...|.++++. +.
T Consensus 339 ~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~ 413 (433)
T 3bws_A 339 KSI---PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNR 413 (433)
T ss_dssp EEE---ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSC
T ss_pred EEe---cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCC
Confidence 333 2345688999999888999998764 4899999865554444443 2468888873 45
Q ss_pred eEEEecCCCCceEEEe
Q psy952 231 HIYWTDWNTKSINRAD 246 (573)
Q Consensus 231 ~lywtd~~~~~I~~~~ 246 (573)
.||.+....+.|...+
T Consensus 414 ~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 414 YLVISDFLDHQIRVYR 429 (433)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCeEEEEE
Confidence 6788876677776554
No 110
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=99.15 E-value=1.7e-11 Score=83.54 Aligned_cols=39 Identities=41% Similarity=0.982 Sum_probs=33.6
Q ss_pred CCCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 522 NITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 522 ~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
...|.+++|+|.++ +|||..|+|||..||.|||||. +|.
T Consensus 5 ~~~C~~~~f~C~~g-~CI~~~~~CDg~~DC~DgSDE~--~C~ 43 (44)
T 3a7q_B 5 AKECEKDQFQCRNE-RCIPSVWRCDEDDDCLDHSDED--DCP 43 (44)
T ss_dssp ---CCTTEEECTTS-CEEEGGGTTSSSCCSSSSTTTS--CC-
T ss_pred CCCCCCCceEcCCC-CEeChhhccCCCCCCCCCcccc--CCC
Confidence 34688899999998 9999999999999999999998 785
No 111
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=99.15 E-value=2.4e-11 Score=82.32 Aligned_cols=39 Identities=36% Similarity=0.926 Sum_probs=35.1
Q ss_pred CCCcCCCceeeCC-CCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 522 NITCPPHHLKCAN-TNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 522 ~~~C~~~~f~C~~-~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
...|.+++|+|.+ + +|||..|+|||..||.|||||. +|.
T Consensus 4 ~~~C~~~~f~C~~~g-~CI~~~~~CDg~~DC~DgSDE~--~C~ 43 (43)
T 2jm4_A 4 DVKCSLGYFPCGNIT-KCLPQLLHCNGVDDCGNQADED--NCG 43 (43)
T ss_dssp SCSCCTTEEECSSSS-CEEEGGGTTSSCCCSSSCCTTS--SCC
T ss_pred CCCCCCCeeECCCCC-eEcCHhhccCCCCCCCCCcccC--CCC
Confidence 3467889999999 6 9999999999999999999998 774
No 112
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.15 E-value=1.4e-11 Score=95.54 Aligned_cols=54 Identities=37% Similarity=0.782 Sum_probs=45.5
Q ss_pred CCCCCCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCC-CCCC-CCCCCCCCCC
Q psy952 519 CPSNITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDP-LHCQ-QRTCPQNSFR 573 (573)
Q Consensus 519 C~~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~-~~c~-~~~c~~~~f~ 573 (573)
| ....|.+++|+|.+...|||.+|+|||..||.|||||.. .+|. ..+|.+.+||
T Consensus 4 C-~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~ 59 (80)
T 2kny_A 4 L-EGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSG 59 (80)
T ss_dssp C-SSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSC
T ss_pred C-CCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccch
Confidence 6 356788999999853399999999999999999999974 3586 4789999996
No 113
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.14 E-value=2.8e-08 Score=99.88 Aligned_cols=228 Identities=9% Similarity=0.009 Sum_probs=147.7
Q ss_pred CEEEEE--ecccEEEEEcCCCceeecccCCc--ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC------
Q psy952 17 PWLIFS--NKYYVRNMSLDATQYSLVHQDLL--NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD------ 86 (573)
Q Consensus 17 ~~l~~s--~~~~I~~i~l~g~~~~~~~~~~~--~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~------ 86 (573)
..++++ ..+.|+++++........+.... .+.++++++.++.||++....+.|+.+++.+......+...
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~ 90 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEV 90 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccc
Confidence 344444 45789999997655432222222 58899999988899999988899999999765443333221
Q ss_pred CCCcceeEEeecCCcEEEEeCC-----------CCeEEEEEcCCCceeE---eccCCCCcceEEEeCCCceEEEEecCCc
Q psy952 87 SHGLEGLAVDWVGRKLYWLDRH-----------SKQLDVAELDGTNRKT---LKTAIQDPRGITLHPGIGYVYFSSWNLQ 152 (573)
Q Consensus 87 ~~~p~glavD~~~~~LY~td~~-----------~~~I~~~~ldg~~~~~---l~~~~~~P~~Iavdp~~g~LYwtd~~~~ 152 (573)
...|.++++++.++.||++... .+.|.+.++....... .......+.+|+++|... ||++..
T Consensus 91 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--- 166 (349)
T 1jmx_B 91 GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--- 166 (349)
T ss_dssp EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS---
T ss_pred cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC---
Confidence 1238999999989999999844 5789999987532211 222334588999999655 887642
Q ss_pred CeEEEEeccCCCcEEEEecCCC----------------------------------------------------------
Q psy952 153 AYIGKIGMDGSNFTRILTHEDD---------------------------------------------------------- 174 (573)
Q Consensus 153 ~~I~r~~ldG~~~~~l~~~~~~---------------------------------------------------------- 174 (573)
.|.+.++........+. ...
T Consensus 167 -~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 -DIYKMDVKTGKYTVALP-LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp -SEEEECTTTCCEEEEEC-STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred -cEEEEeCCCCceecccc-ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 26666654333222221 010
Q ss_pred ---------CCCCceEEEec-cCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEecCCCCce
Q psy952 175 ---------IAWPNALTLDY-FTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSI 242 (573)
Q Consensus 175 ---------l~~P~glaiD~-~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I 242 (573)
-..|.++++++ .+++||++ .+.|..+++........+... ..|.++++. +++||++. ..+.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~-~~~~v 318 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAANLD--HTYYCVAFDKKGDKLYLGG-TFNDL 318 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEECS--SCCCEEEECSSSSCEEEES-BSSEE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEcCC--CCccceEECCCCCEEEEec-CCCeE
Confidence 01345666777 78888888 678999998765543333321 356777774 45788864 45888
Q ss_pred EEEeccCCcceEEE
Q psy952 243 NRADKFNGRDYRVL 256 (573)
Q Consensus 243 ~~~~~~~g~~~~~l 256 (573)
...+..+++.+..+
T Consensus 319 ~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 319 AVFNPDTLEKVKNI 332 (349)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeccccceeeee
Confidence 88887777655554
No 114
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.13 E-value=2.8e-08 Score=107.65 Aligned_cols=230 Identities=7% Similarity=-0.036 Sum_probs=155.8
Q ss_pred CCEEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcC--CCcceEEEcCCCCCcc
Q psy952 16 KPWLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVG--STEKERVIRHDSHGLE 91 (573)
Q Consensus 16 ~~~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~i~~~~~~~p~ 91 (573)
..++++++ .+.|..|+++.......+.....|.++++++.+++||+++. .+.|..+++. ......-+..+ ..|.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G-~~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIG-SEAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECC-SEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecC-CCCc
Confidence 34666666 47899999987655433344456889999999999999874 5689999995 22222223334 4799
Q ss_pred eeEEe----ecCCcEEEEeCCCCeEEEEEcCCCceeEecc--C----------CCCcceEEEeCCCceEEEEecCCcCeE
Q psy952 92 GLAVD----WVGRKLYWLDRHSKQLDVAELDGTNRKTLKT--A----------IQDPRGITLHPGIGYVYFSSWNLQAYI 155 (573)
Q Consensus 92 glavD----~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~--~----------~~~P~~Iavdp~~g~LYwtd~~~~~~I 155 (573)
+|+++ +.++.||+++...+.|.+++.........+. + ...+.+|++.+....+|++. ...++|
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~~g~v 322 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KETGKI 322 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TTTTEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cCCCeE
Confidence 99999 5889999999999999999865543322221 1 11345788887655555554 456788
Q ss_pred EEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-Ccccee-EEEee-e--CC
Q psy952 156 GKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHV-FALTL-F--ED 230 (573)
Q Consensus 156 ~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~~~~~p-~~ia~-~--~~ 230 (573)
..++........+.. ...-..|.++.+++++.++|++....++|..+++........+.- ...+|| .|+.+ . .+
T Consensus 323 ~~vd~~~~~~~~v~~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g 401 (567)
T 1qks_A 323 LLVDYTDLNNLKTTE-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFG 401 (567)
T ss_dssp EEEETTCSSEEEEEE-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTE
T ss_pred EEEecCCCccceeee-eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCC
Confidence 888876543222221 123356889999999999999999999999999875544333332 336777 46554 3 35
Q ss_pred eEEEe-cCCCCceEEEeccC
Q psy952 231 HIYWT-DWNTKSINRADKFN 249 (573)
Q Consensus 231 ~lywt-d~~~~~I~~~~~~~ 249 (573)
.+|+| ..+.+.|..++..+
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeCCCCCCeEEEecCCC
Confidence 67665 45668899888655
No 115
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=1.5e-08 Score=96.37 Aligned_cols=182 Identities=14% Similarity=0.120 Sum_probs=123.5
Q ss_pred CEEEEEecc----cEEEEEcCCCceeec--ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFSNKY----YVRNMSLDATQYSLV--HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~~~----~I~~i~l~g~~~~~~--~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
..|+.+... .|+++++...++... +.......||+++ +++||.+++..+.+++++++......-+..+ .
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~---~ 105 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYP---G 105 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECS---S
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCC---C
Confidence 467888654 799999986654322 2333345677776 7999999999999999999764433333333 2
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee-Eec-c----CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK-TLK-T----AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~-~l~-~----~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
.|.++.+.+++||++|. .++|.++|....... .+. . .+..++.|.. .+|.||...|. ...|.++++.-..
T Consensus 106 ~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~--~~G~lyanvw~-s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 106 EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW--VNGELLANVWL-TSRIARIDPASGK 181 (243)
T ss_dssp CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE--ETTEEEEEETT-TTEEEEECTTTCB
T ss_pred CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE--eCCEEEEEECC-CCeEEEEECCCCC
Confidence 34444556899999995 789999998764432 222 1 2233444443 47899988886 5689999886444
Q ss_pred cEEEEecC-----------CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 165 FTRILTHE-----------DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 165 ~~~l~~~~-----------~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
....+... .....|||||+|+.+++||++--.-.+++.+.+..
T Consensus 182 V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~ 235 (243)
T 3mbr_X 182 VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLTP 235 (243)
T ss_dssp EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEECC
T ss_pred EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEec
Confidence 43333211 12346899999999999999988888888877643
No 116
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.11 E-value=2.4e-08 Score=102.13 Aligned_cols=233 Identities=12% Similarity=0.035 Sum_probs=143.5
Q ss_pred EEEEEec---ccEEEEEc--CCCceeecc----cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcC-CCcceEEEcC-C
Q psy952 18 WLIFSNK---YYVRNMSL--DATQYSLVH----QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVG-STEKERVIRH-D 86 (573)
Q Consensus 18 ~l~~s~~---~~I~~i~l--~g~~~~~~~----~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~i~~~-~ 86 (573)
.|+++.. ..|+.+.+ +...++.+. .....|..|++++.++.||.++.. .|..++++ .+....+... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEeec
Confidence 3455542 35766655 344443331 244578899999988899999876 77777764 2222222221 1
Q ss_pred CCCcceeEEeecCCcE--EEEe-------C-----CCCeEEEEEcC--CCceeEec----cCCCCcceEEEeCCCceEEE
Q psy952 87 SHGLEGLAVDWVGRKL--YWLD-------R-----HSKQLDVAELD--GTNRKTLK----TAIQDPRGITLHPGIGYVYF 146 (573)
Q Consensus 87 ~~~p~glavD~~~~~L--Y~td-------~-----~~~~I~~~~ld--g~~~~~l~----~~~~~P~~Iavdp~~g~LYw 146 (573)
...|..+++++.++.| |.++ . ..+.|.+.+++ |.....+. .....|.+++++|...+||+
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 1358889999877754 4443 1 45677777764 54433332 24567999999998888999
Q ss_pred EecCCcCeEEEEecc-CCCcEEEEecC-C-CCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC---CCcE---EEEEeCC
Q psy952 147 SSWNLQAYIGKIGMD-GSNFTRILTHE-D-DIAWPNALTLDYFTERLYWADAHLDYIASVDLD---GKHK---HIVISGQ 217 (573)
Q Consensus 147 td~~~~~~I~r~~ld-G~~~~~l~~~~-~-~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d---G~~~---~~l~~~~ 217 (573)
++.+ ...|...+++ ....+.+.... . ....|.++++++++++||++....+.|..++++ |... +.+..-.
T Consensus 162 ~~~~-~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 162 ADLT-ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EETT-TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EcCC-CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 9865 4578888876 22222221101 1 245799999999999999999878888877665 3321 1222110
Q ss_pred -cc---c-------eeEEEe-ee--CCeEEEecCCCC-----ceEEEecc-CCcce
Q psy952 218 -KV---P-------HVFALT-LF--EDHIYWTDWNTK-----SINRADKF-NGRDY 253 (573)
Q Consensus 218 -~~---~-------~p~~ia-~~--~~~lywtd~~~~-----~I~~~~~~-~g~~~ 253 (573)
.. . .|.+|+ +. +.+||+++...+ +|...+.. +|+..
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 00 1 588888 73 457999887655 66655532 45533
No 117
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=99.11 E-value=3.6e-11 Score=83.92 Aligned_cols=44 Identities=43% Similarity=0.982 Sum_probs=37.1
Q ss_pred CCCcCCCceeeC-CCCceecCCcCcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy952 522 NITCPPHHLKCA-NTNICVEPYWLCDGDNDCGDMSDEDPLHCQQRTCPQN 570 (573)
Q Consensus 522 ~~~C~~~~f~C~-~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~~~c~~~ 570 (573)
+..|.+.+|+|. ++ +|||..|+|||..||.|||||. .|. .|.++
T Consensus 4 ~~~C~~~~F~C~~~g-~CI~~~~~CDG~~DC~DgSDE~--~C~--~C~~n 48 (50)
T 2knx_A 4 GKTCGPSSFSCPGTH-VCVPERWLCDGDKDCADGADES--IAA--GCLYN 48 (50)
T ss_dssp TCTTCTTEEEETTTT-EEEETTTTTSSSCCSTTCGGGS--GGG--TCCCC
T ss_pred CCCCCCCcEEcCCCC-eEcChhhcCCCCCCCCCCCccc--ccc--CCCCC
Confidence 356888999996 77 9999999999999999999998 664 36543
No 118
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.11 E-value=4.2e-08 Score=94.10 Aligned_cols=191 Identities=16% Similarity=0.096 Sum_probs=131.8
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK 123 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~ 123 (573)
....||.|+ ++.||.+....++|.++++..... ..+ ...-...+||+++ +++||.+....+.|.++|+......
T Consensus 55 ~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 55 AFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEE
Confidence 345799998 689999999988999999976543 333 2221234567765 7899999999999999998754433
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe---cCCCCCCCceEEEeccCCeEEEEeCCCCeE
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT---HEDDIAWPNALTLDYFTERLYWADAHLDYI 200 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~---~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 200 (573)
.-+.....+.||+-| .+.||.++ + ..+|..++........-+. ....+..++.|... +++||...+..+.|
T Consensus 130 ~ti~~~~eGwGLt~D--g~~L~vSd-G-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I 203 (268)
T 3nok_A 130 RTTRYSGEGWGLCYW--NGKLVRSD-G-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEECSSCCCCEEEE--TTEEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred EEEeCCCceeEEecC--CCEEEEEC-C-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeE
Confidence 222222345666655 68999999 4 6789988876544332221 01124455676655 88999999999999
Q ss_pred EEEeCCCCcEEEEEe-CC-----------ccceeEEEeee--CCeEEEecCCCCceEEEe
Q psy952 201 ASVDLDGKHKHIVIS-GQ-----------KVPHVFALTLF--EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 201 ~~~~~dG~~~~~l~~-~~-----------~~~~p~~ia~~--~~~lywtd~~~~~I~~~~ 246 (573)
.++|+....+...+. .. ...-|.|||+. .++||+|.-.-.+++.+.
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 999997555433332 21 02368999996 578999987777888774
No 119
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.10 E-value=1.6e-07 Score=89.40 Aligned_cols=197 Identities=12% Similarity=0.016 Sum_probs=132.0
Q ss_pred cccCCcceEEEEEEcCCCEEEEEECCC--CeEEEEEcCCCcceEEEc-CCCCCcceeEEeecCCcEEEEeCCCCeEEEEE
Q psy952 40 VHQDLLNVVAMDFHYKENRFYFADVAA--KTIYRSRVGSTEKERVIR-HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAE 116 (573)
Q Consensus 40 ~~~~~~~~~~v~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~i~~-~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ 116 (573)
+........||.|+. ++||.+.... .+|.++++........+. ..-...+||+++ +++||.+....+.|.+++
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence 344445567999994 8999997654 589999998665433232 221233556654 899999999999999999
Q ss_pred cCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec-C--CCCCCCceEEEeccCCeEEEE
Q psy952 117 LDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH-E--DDIAWPNALTLDYFTERLYWA 193 (573)
Q Consensus 117 ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~-~--~~l~~P~glaiD~~~~~LYw~ 193 (573)
+.......-+.....+.||+ +..+.||++| + ..+|..++........-+.. . ..+..++.|... +++||..
T Consensus 92 ~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSd-g-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyan 165 (243)
T 3mbr_X 92 LATLTPRARFRYPGEGWALT--SDDSHLYMSD-G-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLAN 165 (243)
T ss_dssp TTTTEEEEEEECSSCCCEEE--ECSSCEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred CCcCcEEEEEeCCCCceEEe--eCCCEEEEEC-C-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEE
Confidence 87544332222223456665 4478999999 4 67899888765443222210 1 123445666654 8999999
Q ss_pred eCCCCeEEEEeCCCCcEEEEEe-CC-----------ccceeEEEeee--CCeEEEecCCCCceEEEe
Q psy952 194 DAHLDYIASVDLDGKHKHIVIS-GQ-----------KVPHVFALTLF--EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 194 D~~~~~I~~~~~dG~~~~~l~~-~~-----------~~~~p~~ia~~--~~~lywtd~~~~~I~~~~ 246 (573)
.+..+.|.++|+....+.-.+. .. ...-|.|||+. .++||+|.-.-.+++.+.
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 9999999999997555543332 21 12368999996 578999987777888775
No 120
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.10 E-value=9.7e-09 Score=98.55 Aligned_cols=179 Identities=13% Similarity=0.128 Sum_probs=122.2
Q ss_pred CEEEEEecc----cEEEEEcCCCcee--ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFSNKY----YVRNMSLDATQYS--LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~~~----~I~~i~l~g~~~~--~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
..|+.+... .|+++++...++. +.+.......||+++ +++||.++...+.+++++++......-+..+ ...
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~-~eG 129 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD-GEG 129 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEECS-SCC
T ss_pred CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEECC-CCc
Confidence 467777743 7999999866543 222333334667776 7899999999999999999765433233322 234
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEec-c----CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLK-T----AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~-~----~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
.||+ +.++.||.+|. .++|.++|..... ...+. . .+..++.|... .|.||...|. ...|.++++.-..
T Consensus 130 ~glt--~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~-~~~I~vIDp~tG~ 203 (262)
T 3nol_A 130 WGLT--HNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQ-TNKIVRIDPETGK 203 (262)
T ss_dssp CCEE--ECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-SSEEEEECTTTCB
T ss_pred eEEe--cCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEcc-CCeEEEEECCCCc
Confidence 4555 55899999995 7899999987533 33332 1 22334556654 6899999886 5689999886444
Q ss_pred cEEEEecCCC-----------CCCCceEEEeccCCeEEEEeCCCCeEEEEeC
Q psy952 165 FTRILTHEDD-----------IAWPNALTLDYFTERLYWADAHLDYIASVDL 205 (573)
Q Consensus 165 ~~~l~~~~~~-----------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~ 205 (573)
....+. ... ...|||||+|+.+++||++--.-.+++.+.+
T Consensus 204 V~~~Id-~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 204 VTGIID-LNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEE-CTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEE-CCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 433332 222 3468999999999999999887788877665
No 121
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=99.08 E-value=3.1e-11 Score=83.60 Aligned_cols=38 Identities=42% Similarity=1.009 Sum_probs=33.8
Q ss_pred CCcCCCceeeC-----CCCceecCCcCcCCCCCCCCCCCCCCCCCC
Q psy952 523 ITCPPHHLKCA-----NTNICVEPYWLCDGDNDCGDMSDEDPLHCQ 563 (573)
Q Consensus 523 ~~C~~~~f~C~-----~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~ 563 (573)
..|.+++|+|. ++ +|||.+|+|||..||.|||||. +|+
T Consensus 5 ~~C~~~~F~C~~~~~~~g-~CIp~~~~CDG~~DC~DgSDE~--~C~ 47 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHG-ECYPQDWLCDGHPDCDDGRDEW--GCG 47 (47)
T ss_dssp -CCSTTEECCSSCTTSCC-CCEEGGGSSCSSCCSSSSTTTG--GGC
T ss_pred CCCCCCceEcCCCCCCCC-cCCCccccCCCcCCCCCCcccC--CCC
Confidence 45788999998 56 9999999999999999999998 774
No 122
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.08 E-value=4.2e-12 Score=116.43 Aligned_cols=61 Identities=26% Similarity=0.633 Sum_probs=54.0
Q ss_pred CCCCCCCCCCcccccCCCCCCCcCCCceee--CCCCceecCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy952 503 VNDCKDNITSDETHARCPSNITCPPHHLKC--ANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQRTCPQNSFR 573 (573)
Q Consensus 503 ~~dC~dg~~~de~~~~C~~~~~C~~~~f~C--~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~~~c~~~~f~ 573 (573)
..+|.++ +||.+ | ..|.+++|+| .+| +|||.+|+|||.+||+|||||. +|+..+|.+++|+
T Consensus 40 ~~~c~d~--sDE~~--C---~~C~~~~F~C~~~~g-~CIp~~~~CDG~~DC~DgSDE~--~C~~~~C~~~~F~ 102 (215)
T 2gtl_O 40 AGSLRHR--VEELE--D---PSCDEHEHQCGGDDP-QCISKLFVCDGHNDCRNGEDEK--DCTLPTKAGDKFI 102 (215)
T ss_dssp HHHHHHH--HHHHS--C---CSSCTTEEECCSSSC-CEEEGGGTTSSSCCSSSCHHHH--CCCCSSCTTCEEE
T ss_pred cccCCcc--hhhcc--C---CCCCCcceeeCCCCC-cCccccccCCCCCcCCCccccc--CCCCCCcCCCcee
Confidence 3467778 88888 8 3599999999 677 9999999999999999999998 9999999999885
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.07 E-value=8.2e-08 Score=100.17 Aligned_cols=226 Identities=14% Similarity=0.098 Sum_probs=158.9
Q ss_pred ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCC--CeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcE
Q psy952 25 YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAA--KTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKL 102 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~L 102 (573)
..|+.+++++.....+......+..++|.+.+++|+++.... ..|+.+++.+.....+... -..+..+++.+.++.|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-PRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-SSCEEEEEECTTSSEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-CCcccCEEEcCCCCEE
Confidence 689999999876665554455688999999999999987654 5899999987665544432 2467789999888889
Q ss_pred EEEeCC--CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEec-CCcCeEEEEeccCCCcEEEEecCCCCCCCc
Q psy952 103 YWLDRH--SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSW-NLQAYIGKIGMDGSNFTRILTHEDDIAWPN 179 (573)
Q Consensus 103 Y~td~~--~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~-~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~ 179 (573)
+++-.. ...|++.++.+.....+.........+++.|...+|+++.. .....|++.++++...+.+. .......
T Consensus 238 a~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~---~~~~~~~ 314 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT---WEGSQNQ 314 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC---CSSSEEE
T ss_pred EEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe---cCCCccc
Confidence 887643 34699999987666555555456788999998887887763 23458999999877655443 2223456
Q ss_pred eEEEeccCCeEEEEeCC--CCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEEecCCCC--ceEEEeccCCcce
Q psy952 180 ALTLDYFTERLYWADAH--LDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTDWNTK--SINRADKFNGRDY 253 (573)
Q Consensus 180 glaiD~~~~~LYw~D~~--~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lywtd~~~~--~I~~~~~~~g~~~ 253 (573)
.+++.+.+.+|+++... ...|+.+++++...+.+... ....++++ .+..|+++....+ .|+.++. +|...
T Consensus 315 ~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~---~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~-~g~~~ 390 (415)
T 2hqs_A 315 DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST---FLDETPSLAPNGTMVIYSSSQGMGSVLNLVST-DGRFK 390 (415)
T ss_dssp EEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS---SSCEEEEECTTSSEEEEEEEETTEEEEEEEET-TSCCE
T ss_pred CeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC---CCcCCeEEcCCCCEEEEEEcCCCccEEEEEEC-CCCcE
Confidence 78999989999888654 45899999988776554432 24566666 3556776654433 6888874 45555
Q ss_pred EEEcc
Q psy952 254 RVLRN 258 (573)
Q Consensus 254 ~~l~~ 258 (573)
+.|..
T Consensus 391 ~~l~~ 395 (415)
T 2hqs_A 391 ARLPA 395 (415)
T ss_dssp EECCC
T ss_pred EEeeC
Confidence 55443
No 124
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.06 E-value=2.3e-13 Score=124.77 Aligned_cols=124 Identities=19% Similarity=0.344 Sum_probs=91.9
Q ss_pred CCCCCCCCCCCCCCccCCcCCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCCCCC--CCCCCCC-ccC-CCCCCC
Q psy952 432 FDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC--PLESLGS-VCN-GVNDCK 507 (573)
Q Consensus 432 ~~~dC~d~sDE~~~~C~~~~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~~~C--~~c~~~~-~Cd-~~~dC~ 507 (573)
...+|.|+|||.+ |. .|.+++|+|.. .+++|||..|+|||.+||.||||| .+| ++|.+.. .|. ....|.
T Consensus 39 ~~~~c~d~sDE~~--C~--~C~~~~F~C~~-~~g~CIp~~~~CDG~~DC~DgSDE--~~C~~~~C~~~~F~c~~~~~~C~ 111 (215)
T 2gtl_O 39 KAGSLRHRVEELE--DP--SCDEHEHQCGG-DDPQCISKLFVCDGHNDCRNGEDE--KDCTLPTKAGDKFIGDVCFDHCT 111 (215)
T ss_dssp HHHHHHHHHHHHS--CC--SSCTTEEECCS-SSCCEEEGGGTTSSSCCSSSCHHH--HCCCCSSCTTCEEEEEEEEESSC
T ss_pred ccccCCcchhhcc--CC--CCCCcceeeCC-CCCcCccccccCCCCCcCCCcccc--cCCCCCCcCCCceeeeECCCccc
Confidence 3457889999987 74 59999999941 168999999999999999999999 889 4576544 452 223477
Q ss_pred CCCCCcccccCCCCCCCcC--CCceeeCCC--Cceec-----------CCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy952 508 DNITSDETHARCPSNITCP--PHHLKCANT--NICVE-----------PYWLCDGDNDCGDMSDEDPLHCQQRTCPQNSF 572 (573)
Q Consensus 508 dg~~~de~~~~C~~~~~C~--~~~f~C~~~--~~Ci~-----------~~~~Cdg~~dC~d~sDe~~~~c~~~~c~~~~f 572 (573)
+. +++.. |. ..|. ..+|.|.++ ..||. .+|.|||..| ++|+|. .|....|...+|
T Consensus 112 ~~--~~~~~--c~--~~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd--~gs~el--~~~pp~~~~l~f 181 (215)
T 2gtl_O 112 KR--RPEHM--TL--AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS--FADHRL--TIHPPEEDGLGL 181 (215)
T ss_dssp SS--CCSEE--EE--EEEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE--TTTTEE--EECCSSTTTEEE
T ss_pred CC--CCCCc--ee--eeeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec--CCccee--eecCCCCCCcee
Confidence 77 77765 52 3444 467888876 46888 8999999999 699997 675544544333
No 125
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.06 E-value=1.3e-07 Score=90.63 Aligned_cols=192 Identities=11% Similarity=0.075 Sum_probs=130.0
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCC--eEEEEEcCCCcceEEEcCCCCCc--ceeEEeecCCcEEEEeCCCCeEEEEEcC
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAK--TIYRSRVGSTEKERVIRHDSHGL--EGLAVDWVGRKLYWLDRHSKQLDVAELD 118 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~i~~~~~~~p--~glavD~~~~~LY~td~~~~~I~~~~ld 118 (573)
.-....||.|+ ++.||.+....+ +|.++++.......-+..+ ..+ +||+++ +++||.+....+.+.++|+.
T Consensus 41 ~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 41 TKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDW--KDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp TTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred CCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEe--CCEEEEEEeeCCEEEEEECc
Confidence 33445899998 579999986544 8999999865443322222 244 566665 88999999989999999987
Q ss_pred CCce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecC---CCCCCCceEEEeccCCeEEEEe
Q psy952 119 GTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE---DDIAWPNALTLDYFTERLYWAD 194 (573)
Q Consensus 119 g~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~---~~l~~P~glaiD~~~~~LYw~D 194 (573)
.... .++-- ...+.||+- ..+.||.++ + ..+|..++........-+... ..+..+|.|... +++||+..
T Consensus 116 t~~~~~ti~~-~~eG~glt~--dg~~L~~Sd-G-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~ 188 (262)
T 3nol_A 116 NLRQVRSFNY-DGEGWGLTH--NDQYLIMSD-G-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANV 188 (262)
T ss_dssp TCCEEEEEEC-SSCCCCEEE--CSSCEEECC-S-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEE
T ss_pred cCcEEEEEEC-CCCceEEec--CCCEEEEEC-C-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEE
Confidence 5443 33332 224556664 468999998 4 578999887644332222101 123455667664 78999999
Q ss_pred CCCCeEEEEeCCCCcEEEEEe-CCc----------cceeEEEeee--CCeEEEecCCCCceEEEe
Q psy952 195 AHLDYIASVDLDGKHKHIVIS-GQK----------VPHVFALTLF--EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 195 ~~~~~I~~~~~dG~~~~~l~~-~~~----------~~~p~~ia~~--~~~lywtd~~~~~I~~~~ 246 (573)
+..+.|.++|+....+...+. ... ..-|.|||+. .++||+|.-.-.+++.+.
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~ 253 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEIT 253 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEE
Confidence 999999999997555543333 210 1367999996 578999977777888765
No 126
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=99.05 E-value=4.2e-11 Score=83.23 Aligned_cols=40 Identities=38% Similarity=0.894 Sum_probs=36.8
Q ss_pred CCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCCC
Q psy952 523 ITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ 564 (573)
Q Consensus 523 ~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~ 564 (573)
..|.+++|+|.++.+||+.+|+|||..||.|||||. +|..
T Consensus 5 ~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~--~C~~ 44 (48)
T 2i1p_A 5 LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEA--GCPT 44 (48)
T ss_dssp CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHH--SSCS
T ss_pred CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccc--cCCC
Confidence 568899999999868999999999999999999999 8875
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.05 E-value=2.2e-07 Score=100.47 Aligned_cols=246 Identities=15% Similarity=0.124 Sum_probs=165.9
Q ss_pred CEEEEEe--cccEEEEEcCCCceeecccC------------CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-e-
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSLVHQD------------LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-E- 80 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~~~~~------------~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~- 80 (573)
.+|++++ ...|..++....+....+.. ...+.+|++.+..+.+|++....+.|..+++..... .
T Consensus 238 ~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~ 317 (543)
T 1nir_A 238 RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV 317 (543)
T ss_dssp TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE
T ss_pred CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee
Confidence 4666665 46788888765443222211 125788999988999999999999999999865322 2
Q ss_pred EEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCC--Cc-ceEEE-eCCCceEEEEecCCcCeEE
Q psy952 81 RVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQ--DP-RGITL-HPGIGYVYFSSWNLQAYIG 156 (573)
Q Consensus 81 ~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~--~P-~~Iav-dp~~g~LYwtd~~~~~~I~ 156 (573)
..+..+ ..|.++++++.++.||++....++|.+.++........+.... +| +++++ +|..|.+|++.......|.
T Consensus 318 ~~i~~~-~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~ 396 (543)
T 1nir_A 318 TSIGAA-PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSIS 396 (543)
T ss_dssp EEEECC-SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEE
T ss_pred EEeccC-cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEE
Confidence 122333 5799999999999999999888899999987554433333222 33 35554 7877899988743356788
Q ss_pred EEeccC--------CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCC------CCeEEEEeCCCCcE--EEEE------
Q psy952 157 KIGMDG--------SNFTRILTHEDDIAWPNALTLDYFTERLYWADAH------LDYIASVDLDGKHK--HIVI------ 214 (573)
Q Consensus 157 r~~ldG--------~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~------~~~I~~~~~dG~~~--~~l~------ 214 (573)
..+++. ...++|- ..-..+..|++.+.+.+||+.... .+.|..++.+.... +++.
T Consensus 397 v~d~~~~~~~~~~~~~v~~l~---~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~ 473 (543)
T 1nir_A 397 LIGTDPKNHPQYAWKKVAELQ---GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWAD 473 (543)
T ss_dssp EEECCTTTCTTTBTSEEEEEE---CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHC
T ss_pred EEEeCCCCCchhcCeEEEEEE---cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcc
Confidence 888764 2222332 223456789999888888876531 45899999874433 3331
Q ss_pred -eCCccceeEEEee--eCCeEEEecCC----CCceEEEeccCCcceEEEcc-cCCCceeee
Q psy952 215 -SGQKVPHVFALTL--FEDHIYWTDWN----TKSINRADKFNGRDYRVLRN-TTHRPYDIH 267 (573)
Q Consensus 215 -~~~~~~~p~~ia~--~~~~lywtd~~----~~~I~~~~~~~g~~~~~l~~-~~~~p~~i~ 267 (573)
... ...+..+++ .+.+||++.|. .+.|..++..+++...++.. .+..|.|.-
T Consensus 474 ~~~~-~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~p~g~~ 533 (543)
T 1nir_A 474 LGEG-AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKF 533 (543)
T ss_dssp CCSS-CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEEE
T ss_pred cCCC-CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCCccCCCeee
Confidence 111 356777777 57789999873 58899999999988887753 355676643
No 128
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=99.04 E-value=2.8e-11 Score=82.43 Aligned_cols=35 Identities=49% Similarity=1.139 Sum_probs=32.9
Q ss_pred CCcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCC
Q psy952 523 ITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDED 558 (573)
Q Consensus 523 ~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~ 558 (573)
..|.+++|+|.++ +|||..|+|||..||.|+|||.
T Consensus 3 ~~C~~~~F~C~~g-~CI~~~~~CDg~~DC~DgSDE~ 37 (44)
T 1j8e_A 3 HSCSSTQFKCNSG-RCIPEHWTCDGDNDCGDYSDET 37 (44)
T ss_dssp SSSCTTEEECTTS-CEEEGGGTTSSSCCSSSSGGGS
T ss_pred CCCCCCceEeCCC-CeEecCcccCCCCCCCCCCCCC
Confidence 3578899999999 9999999999999999999998
No 129
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.03 E-value=1.1e-08 Score=98.20 Aligned_cols=179 Identities=16% Similarity=0.157 Sum_probs=121.7
Q ss_pred CEEEEEecc--cEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCccee
Q psy952 17 PWLIFSNKY--YVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGL 93 (573)
Q Consensus 17 ~~l~~s~~~--~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gl 93 (573)
..|+++... .|+++++...+. ..++.......||+++ +++||.+.+..+.+++++++......-+... ..+.||
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL 141 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGL 141 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEE
Confidence 467777753 599999976543 2223333334667775 7899999999999999998764433223322 234556
Q ss_pred EEeecCCcEEEEeCCCCeEEEEEcCCCcee-Eec-c----CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEE
Q psy952 94 AVDWVGRKLYWLDRHSKQLDVAELDGTNRK-TLK-T----AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTR 167 (573)
Q Consensus 94 avD~~~~~LY~td~~~~~I~~~~ldg~~~~-~l~-~----~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~ 167 (573)
+. .+++||.+| +.++|.++|....... .+. . .+..++.|... .|.||...|. ...|.++++.-.....
T Consensus 142 t~--Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~-s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 142 CY--WNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWH-SSDVLEIDPATGTVVG 215 (268)
T ss_dssp EE--ETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-CSEEEEECTTTCBEEE
T ss_pred ec--CCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECC-CCeEEEEeCCCCcEEE
Confidence 55 488999999 5889999998764432 222 1 23345555554 7899998875 5689999986444333
Q ss_pred EEecCC------------CCCCCceEEEeccCCeEEEEeCCCCeEEEEeC
Q psy952 168 ILTHED------------DIAWPNALTLDYFTERLYWADAHLDYIASVDL 205 (573)
Q Consensus 168 l~~~~~------------~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~ 205 (573)
.+. .. ....|||||+|+.+++||++--.-.+++.+.+
T Consensus 216 ~Id-l~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 216 VID-ASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEE-CHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEE-CCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 332 11 23478999999999999999887788887765
No 130
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.00 E-value=4.4e-08 Score=100.19 Aligned_cols=185 Identities=18% Similarity=0.145 Sum_probs=125.2
Q ss_pred cccEEEEEcC--CCceeecc----cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcC-CCcceEE--Ec--CCCCCcce
Q psy952 24 KYYVRNMSLD--ATQYSLVH----QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVG-STEKERV--IR--HDSHGLEG 92 (573)
Q Consensus 24 ~~~I~~i~l~--g~~~~~~~----~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~i--~~--~~~~~p~g 92 (573)
...|..++++ |.....+. .....+.+++|++.++.||+++...+.|+.++++ .+....+ +. .....|.+
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 3456666664 43221111 2345789999999888999999888899999987 3333222 21 11357999
Q ss_pred eEEeecCCcEEEEeCCCCeEEEEEcC---CCcee---Ee--cc-CC---C-------CcceEE-EeCCCceEEEEecCCc
Q psy952 93 LAVDWVGRKLYWLDRHSKQLDVAELD---GTNRK---TL--KT-AI---Q-------DPRGIT-LHPGIGYVYFSSWNLQ 152 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~~I~~~~ld---g~~~~---~l--~~-~~---~-------~P~~Ia-vdp~~g~LYwtd~~~~ 152 (573)
|++++.++.||+++...+.|.+++++ |.... .+ +. .. . .|.+|+ ++|...+||+++.+..
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 99999999999999878888888765 43221 12 11 11 2 488999 9998889999986432
Q ss_pred C----eEEEEecc--CCCcEE--EEecCCCCCCCceEEEec---cCCeEEEEeCCCCeEEEEeCCCCcE
Q psy952 153 A----YIGKIGMD--GSNFTR--ILTHEDDIAWPNALTLDY---FTERLYWADAHLDYIASVDLDGKHK 210 (573)
Q Consensus 153 ~----~I~r~~ld--G~~~~~--l~~~~~~l~~P~glaiD~---~~~~LYw~D~~~~~I~~~~~dG~~~ 210 (573)
. .|...+++ |....+ ++ ......|.++++++ ++++||++....+.|..+++++...
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~--~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLS--PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEE--ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCCCeEEEEEECCCCCEEEeeeee--ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 1 66666654 443221 22 22345689999998 6899999988888888887776633
No 131
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.99 E-value=5.9e-11 Score=82.27 Aligned_cols=39 Identities=41% Similarity=0.991 Sum_probs=34.3
Q ss_pred CCcCCCceeeC-----CCCceecCCcCcCCCCCCCCCCCCCCCCCCC
Q psy952 523 ITCPPHHLKCA-----NTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ 564 (573)
Q Consensus 523 ~~C~~~~f~C~-----~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~ 564 (573)
..|.+++|+|. ++ +|||.+|+|||+.||.|||||. +|..
T Consensus 3 ~~C~~~~F~C~~~~~~~~-~CIp~~~~CDG~~DC~DgSDE~--~C~~ 46 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHG-ECYPQDWLCDGHPDCDDGRDEW--GCGT 46 (47)
T ss_dssp CCCCCCCSCSSSCSCCCT-TTSGGGGSSSSSCCSSSSCTTH--HHHC
T ss_pred CCCCCCeeECCCCCCCCC-eEcCHhhcCCCCcCCCCCcccc--cCCC
Confidence 35788999998 55 9999999999999999999998 7753
No 132
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.98 E-value=1.3e-10 Score=90.05 Aligned_cols=69 Identities=23% Similarity=0.498 Sum_probs=54.7
Q ss_pred CCCCCCCCCCCceecC-CCcccCCCcccCCCCCCCCCCCCCC-CccC-CcCCCCCCcCCCCCCCccccCCcccc
Q psy952 404 MCHNRPCDKDTEFACR-NGHCIPKLWVCDFDNDCGDDSDEPA-YMCR-QRNCTKGWERCPGKTNYRCIPKWLFC 474 (573)
Q Consensus 404 ~C~~~~C~~~~~f~C~-~g~ci~~~~~Cd~~~dC~d~sDE~~-~~C~-~~~C~~~~~~C~~~~~~~c~~~~~~C 474 (573)
.|....|.++ +|+|. +|.|||..|+|||..||.|+|||.. ..|. ..+|.+.+|+|... -.+||+..+..
T Consensus 3 ~C~~~~C~~~-~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~-~~~ci~~~~~g 74 (80)
T 2kny_A 3 KLEGKTCGPS-SFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEE-LRVRLASHLRK 74 (80)
T ss_dssp SCSSCCCSSS-EEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHH-HHHHTTTTTTT
T ss_pred CCCCCCCCCC-ceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhH-HHHHHHHHHHH
Confidence 5777788888 99998 6899999999999999999999974 2365 35688899999820 05788766554
No 133
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.98 E-value=1.4e-07 Score=96.48 Aligned_cols=234 Identities=10% Similarity=0.084 Sum_probs=144.1
Q ss_pred ccEEEEEcCCCcee--ecccC------CcceEEEEEEcCCCEEEEEECC-CCeEEEEEcCCCcceEEEcCCCCCcceeEE
Q psy952 25 YYVRNMSLDATQYS--LVHQD------LLNVVAMDFHYKENRFYFADVA-AKTIYRSRVGSTEKERVIRHDSHGLEGLAV 95 (573)
Q Consensus 25 ~~I~~i~l~g~~~~--~~~~~------~~~~~~v~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~i~~~~~~~p~glav 95 (573)
+.|.++++...... +.+.. ...|.++++++.+++||+++.. .+.|..+++........+.. .... ..+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g~~-~~~ 185 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PDCY-HIF 185 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEE-EEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--CCcc-eee
Confidence 56888988766542 22221 2368899999999999999975 78999999976543222221 1221 222
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCC-ceeE----eccCCCCcce--EEEeCCCceEEEEecCCcCeEEEEeccCCCcEEE
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGT-NRKT----LKTAIQDPRG--ITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRI 168 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~-~~~~----l~~~~~~P~~--Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l 168 (573)
+.+.+.|++....+++.++++... .... ++.....|.. .++++..|.+||... .+.|+.+++.+...+++
T Consensus 186 -P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 186 -PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFL 262 (386)
T ss_dssp -EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEEC
T ss_pred -cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceee
Confidence 334444555555566666666432 1111 1111112332 466655776666543 46899999987765443
Q ss_pred EecC--C-----CCCCCc---eEEEeccCCeEEEEeC---------CCCeEEEEeCCCCcE-EEEEeCCccceeEEEeee
Q psy952 169 LTHE--D-----DIAWPN---ALTLDYFTERLYWADA---------HLDYIASVDLDGKHK-HIVISGQKVPHVFALTLF 228 (573)
Q Consensus 169 ~~~~--~-----~l~~P~---glaiD~~~~~LYw~D~---------~~~~I~~~~~dG~~~-~~l~~~~~~~~p~~ia~~ 228 (573)
-... . .-..|. .+++++..++||++.. ..++|+.+|+....+ +.+..+ ..|.+|++.
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg---~~~~~lavs 339 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVS 339 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEEC
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---CCcceEEEC
Confidence 2000 0 001233 4889999999999853 125799999876554 333333 267788883
Q ss_pred --CC-eEEEecCCCCceEEEeccCCcceEEEcccCCCceeeee
Q psy952 229 --ED-HIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHV 268 (573)
Q Consensus 229 --~~-~lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v 268 (573)
+. .||.+++..+.|..++..+++.+..+... .+|..|.+
T Consensus 340 ~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~ 381 (386)
T 3sjl_D 340 QDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVIT 381 (386)
T ss_dssp SSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEE
T ss_pred CCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEE
Confidence 33 68999999999999999999887777653 46666654
No 134
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.96 E-value=3.8e-10 Score=76.83 Aligned_cols=38 Identities=53% Similarity=1.127 Sum_probs=33.7
Q ss_pred CCCCCCceecCCCcccCCCcccCCCCCCCCCCCCCCCcc
Q psy952 409 PCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 447 (573)
Q Consensus 409 ~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~~~C 447 (573)
.|.++ +|+|.+|+|||..|+|||..||.|+|||....|
T Consensus 5 ~C~~~-~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c~C 42 (45)
T 1d2l_A 5 QCQPG-EFACANSRCIQERWKCDGDNDCLDNSDEAPALC 42 (45)
T ss_dssp BTTBT-CEEETTTEEECGGGTTTSSCTTTTCSTTSTTTC
T ss_pred cCCCC-ceEcCCCCeEehhhccCCCCCCCCCCCCCCCcC
Confidence 56667 999999999999999999999999999987433
No 135
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.94 E-value=2.2e-07 Score=100.64 Aligned_cols=214 Identities=14% Similarity=0.072 Sum_probs=144.8
Q ss_pred EEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC---CCceeEeccC
Q psy952 52 FHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD---GTNRKTLKTA 128 (573)
Q Consensus 52 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld---g~~~~~l~~~ 128 (573)
+|+ .+.+|++....+.|..++++.......+..+ ..|.++++++.++.||+++. .+.|.++++. +.....+ ..
T Consensus 163 ~d~-~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i-~~ 238 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEI-KI 238 (567)
T ss_dssp CCG-GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEE-EC
T ss_pred cCC-CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEE-ec
Confidence 453 6789999999999999999865544334444 47899999999999999974 6789999994 3222222 23
Q ss_pred CCCcceEEEe----CCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCC----------CCCCceEEEeccCCeEEEEe
Q psy952 129 IQDPRGITLH----PGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD----------IAWPNALTLDYFTERLYWAD 194 (573)
Q Consensus 129 ~~~P~~Iavd----p~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~----------l~~P~glaiD~~~~~LYw~D 194 (573)
...|++|+++ |..++||+++.. .+.|..++.........+. ... -..+.+|...+.+..+|++-
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~-~~~v~ViD~~t~~~~~~i~-~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYW-PPQYVIMDGETLEPKKIQS-TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEE-TTEEEEEETTTCCEEEEEE-CCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred CCCCceeEEccccCCCCCEEEEEEcc-CCeEEEEECCCCcEEEEEe-ccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 4569999999 688899999854 5667777644333222221 111 01335777777777888888
Q ss_pred CCCCeEEEEeCCCCcEEEEE--eCCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEcc--cCCCc-eeeeee
Q psy952 195 AHLDYIASVDLDGKHKHIVI--SGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRN--TTHRP-YDIHVY 269 (573)
Q Consensus 195 ~~~~~I~~~~~dG~~~~~l~--~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~~--~~~~p-~~i~v~ 269 (573)
...++|..+++.......+. ......+..++.-.+.++|++...+++|..++..+++....+.. ...+| .++.++
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~ 396 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFV 396 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEE
T ss_pred cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeE
Confidence 88899999998764322222 12113344444446778999999999999999888876665543 23344 366666
Q ss_pred ec
Q psy952 270 HP 271 (573)
Q Consensus 270 ~~ 271 (573)
+|
T Consensus 397 ~p 398 (567)
T 1qks_A 397 HP 398 (567)
T ss_dssp ET
T ss_pred CC
Confidence 66
No 136
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=1.6e-07 Score=96.95 Aligned_cols=219 Identities=12% Similarity=0.067 Sum_probs=139.2
Q ss_pred CCCEEEEEe--cccEEEEEcCC--Cceee--cc--------cCCcceEEEEEEcCCCEEEEEECCC------CeEEEEEc
Q psy952 15 IKPWLIFSN--KYYVRNMSLDA--TQYSL--VH--------QDLLNVVAMDFHYKENRFYFADVAA------KTIYRSRV 74 (573)
Q Consensus 15 ~~~~l~~s~--~~~I~~i~l~g--~~~~~--~~--------~~~~~~~~v~~d~~~~~ly~~d~~~------~~I~~~~~ 74 (573)
...+|+++. .+.|+.+++.. ...++ .+ .+...|..+..-+.+ ||++...+ +.|..++.
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEEC
Confidence 356888876 47899999853 22222 22 145578888888654 99987655 68998887
Q ss_pred CCCcceEEEcCCCCCcceeEE----eecCCcEEEEeC------------------CCCeEEEEEcCCCcee-Eecc--CC
Q psy952 75 GSTEKERVIRHDSHGLEGLAV----DWVGRKLYWLDR------------------HSKQLDVAELDGTNRK-TLKT--AI 129 (573)
Q Consensus 75 ~g~~~~~i~~~~~~~p~glav----D~~~~~LY~td~------------------~~~~I~~~~ldg~~~~-~l~~--~~ 129 (573)
++......+..+ ..|.++++ .+..+.+|.++. ..++|.+.+++..... ++-- ..
T Consensus 172 ~T~~v~~~~~~~-~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEID-RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSB-CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEEEEccC-CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 754433223222 24555554 445677777763 3689999999864322 2221 22
Q ss_pred CCcceEEE--eCCCceEEEEec----CCcCeEEEEeccCCCc---EEE-Eec---CCC-----------CCCCceEEEec
Q psy952 130 QDPRGITL--HPGIGYVYFSSW----NLQAYIGKIGMDGSNF---TRI-LTH---EDD-----------IAWPNALTLDY 185 (573)
Q Consensus 130 ~~P~~Iav--dp~~g~LYwtd~----~~~~~I~r~~ldG~~~---~~l-~~~---~~~-----------l~~P~glaiD~ 185 (573)
..|+.|++ +|...++|++.. ...+.|.+...++... +++ +.. ... -..|.+|.|.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 45999977 999999999884 0245676666554211 111 100 001 14589999999
Q ss_pred cCCeEEEEeCCCCeEEEEeCC-CCcEEEEE---eCCcc------------ceeEEEee--eCCeEEEec
Q psy952 186 FTERLYWADAHLDYIASVDLD-GKHKHIVI---SGQKV------------PHVFALTL--FEDHIYWTD 236 (573)
Q Consensus 186 ~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~---~~~~~------------~~p~~ia~--~~~~lywtd 236 (573)
++++||++.++.+.|..++.+ ....+++. .++.+ ..|.+|++ ++.+||+|+
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999999999999999974 33333332 23111 15877777 577999999
No 137
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.93 E-value=2.3e-08 Score=104.04 Aligned_cols=211 Identities=14% Similarity=0.096 Sum_probs=128.7
Q ss_pred cCCCEEEEEECCC----CeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeC---------CCCeEEEEEcCCC
Q psy952 54 YKENRFYFADVAA----KTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDR---------HSKQLDVAELDGT 120 (573)
Q Consensus 54 ~~~~~ly~~d~~~----~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~---------~~~~I~~~~ldg~ 120 (573)
+..++||+++... +.|.++++........+..+ ..| +|++++.++.||+++. ..+.|.++|+...
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 3467899999865 79999998765544444445 478 9999999999999985 3567999998654
Q ss_pred ce-eEec-c------CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCC--CCCCce----E-----
Q psy952 121 NR-KTLK-T------AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD--IAWPNA----L----- 181 (573)
Q Consensus 121 ~~-~~l~-~------~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~--l~~P~g----l----- 181 (573)
.. ..+. . ....|++|+++|..++||+++......|.++++.......-+. ... ...|.| +
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCCceeeccCCCcEEEEEcCC
Confidence 43 3332 2 1357999999999999999986434567666665332211110 000 001111 2
Q ss_pred --------------------------------EEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-----Cc---cce
Q psy952 182 --------------------------------TLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-----QK---VPH 221 (573)
Q Consensus 182 --------------------------------aiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-----~~---~~~ 221 (573)
++.+..+++||+.. .++|+.++..+....++..- .. -..
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 22434445555432 35566666655443332110 00 012
Q ss_pred e-----EEEeeeCCeEEEecCC---------CCceEEEeccCCcceEEEcccCCCceeeeee
Q psy952 222 V-----FALTLFEDHIYWTDWN---------TKSINRADKFNGRDYRVLRNTTHRPYDIHVY 269 (573)
Q Consensus 222 p-----~~ia~~~~~lywtd~~---------~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~ 269 (573)
| .++.-.+++||+++.. .+.|..++..+.+.+..|..+. .|.+|.+-
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~s 378 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVS 378 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEEC
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEc
Confidence 3 3444467899998642 3579999988888777665432 57777654
No 138
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.92 E-value=2.6e-10 Score=103.39 Aligned_cols=50 Identities=30% Similarity=0.745 Sum_probs=44.4
Q ss_pred CCcCCCceeeC--CCCceecCCcCcCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
Q psy952 523 ITCPPHHLKCA--NTNICVEPYWLCDGDNDCGDMSDEDPLHCQQR-TCPQNSFR 573 (573)
Q Consensus 523 ~~C~~~~f~C~--~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~~-~c~~~~f~ 573 (573)
..|.+.+|+|. ++ .|||..|+|||.+||+|||||.+.+|... +|++.+|+
T Consensus 51 ~~C~~~eFqC~~~~g-~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~ 103 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQ-ECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFS 103 (220)
T ss_dssp CSSCTTEEECCSSSC-CEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEE
T ss_pred CCCCCCccCcCCCCC-cEeCcceecCCCCCCCCCCccCcccCCCCCccCCccee
Confidence 46788999995 45 99999999999999999999976689988 99998885
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.92 E-value=1.4e-07 Score=94.13 Aligned_cols=177 Identities=10% Similarity=-0.073 Sum_probs=115.6
Q ss_pred EEEEEECCCCeEEEEEcCCCcceEEEcCCCC--CcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCC------
Q psy952 58 RFYFADVAAKTIYRSRVGSTEKERVIRHDSH--GLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAI------ 129 (573)
Q Consensus 58 ~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~--~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~------ 129 (573)
.++++....+.|+.+++........+..+.. .|.++++++.++.||++....+.|.+.++........+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 3556666667777777765433323322211 59999999988899999988889999998654433222211
Q ss_pred CCcceEEEeCCCceEEEEecC----------CcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCe
Q psy952 130 QDPRGITLHPGIGYVYFSSWN----------LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDY 199 (573)
Q Consensus 130 ~~P~~Iavdp~~g~LYwtd~~----------~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~ 199 (573)
..|.+++++|...+||++..+ ....|.+.++........+ ..-..|.++++++.+.+||++ .+.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~---~~~ 155 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF---EAPRQITMLAWARDGSKLYGL---GRD 155 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE---ECCSSCCCEEECTTSSCEEEE---SSS
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE---eCCCCcceeEECCCCCEEEEe---CCe
Confidence 269999999988899999521 2468888888765443333 223468999999988899999 367
Q ss_pred EEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCC
Q psy952 200 IASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTK 240 (573)
Q Consensus 200 I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~ 240 (573)
|..+++........+.......|..+...+..||++....+
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 196 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSG 196 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTT
T ss_pred EEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCC
Confidence 99999876654433332211234444445555655544433
No 140
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.92 E-value=8.4e-08 Score=102.29 Aligned_cols=250 Identities=11% Similarity=0.078 Sum_probs=159.6
Q ss_pred CEEEEEe--cccEEEEEcCCCceee--cccCCcceEEEEE-E-cCCCEEEEEEC-----------------CCCeEEEEE
Q psy952 17 PWLIFSN--KYYVRNMSLDATQYSL--VHQDLLNVVAMDF-H-YKENRFYFADV-----------------AAKTIYRSR 73 (573)
Q Consensus 17 ~~l~~s~--~~~I~~i~l~g~~~~~--~~~~~~~~~~v~~-d-~~~~~ly~~d~-----------------~~~~I~~~~ 73 (573)
.+|++.+ ..+|.+|+++..+... .++....|.|+++ . +.+++||.+.. ..+.+..++
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID 181 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD 181 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEE
Confidence 3666665 4679999999866433 3445567999998 4 78999999952 234788888
Q ss_pred cCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCC--------------CeE-----------------------EEEE
Q psy952 74 VGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHS--------------KQL-----------------------DVAE 116 (573)
Q Consensus 74 ~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~--------------~~I-----------------------~~~~ 116 (573)
.+.......+..+ ..|+++++++.++.+|+|.... +.| .|++
T Consensus 182 ~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID 260 (595)
T 1fwx_A 182 ADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVD 260 (595)
T ss_dssp TTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEE
T ss_pred CCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEe
Confidence 8754332222223 3899999999999999998654 223 3344
Q ss_pred cCCC--ce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC----------cEEEEecCCCCCCCceEEE
Q psy952 117 LDGT--NR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN----------FTRILTHEDDIAWPNALTL 183 (573)
Q Consensus 117 ldg~--~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~----------~~~l~~~~~~l~~P~glai 183 (573)
.... .. ...+.....|.||+++|...++|+++.. .++|.+++++-.. ..++.. ...-..|.++++
T Consensus 261 ~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-s~~VsVid~~~~~~~~~~~l~~~~~v~~~-v~vG~gP~h~aF 338 (595)
T 1fwx_A 261 GRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-SPTVTVLDVTRFDAVFYENADPRSAVVAE-PELGLGPLHTAF 338 (595)
T ss_dssp CSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-SSBEEEEEGGGHHHHHHSCCCGGGGEEEC-CBCCSCEEEEEE
T ss_pred CcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-CCeEEEEECcccccccccccCcccceEEE-cCCCCCcceEEE
Confidence 3321 01 1122333579999999999999999965 6778888876321 112221 334467999999
Q ss_pred eccCCeEEEEeCCCCeEEEEeCCCC-------c-EEEEEeCCcccee------EEEee--eCCeEEEecCCC-Cce----
Q psy952 184 DYFTERLYWADAHLDYIASVDLDGK-------H-KHIVISGQKVPHV------FALTL--FEDHIYWTDWNT-KSI---- 242 (573)
Q Consensus 184 D~~~~~LYw~D~~~~~I~~~~~dG~-------~-~~~l~~~~~~~~p------~~ia~--~~~~lywtd~~~-~~I---- 242 (573)
++++ ++|.+-.-.+.|...+++.. . .+++..-.--.+| .|+++ ++.+||.++..+ .++
T Consensus 339 ~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~g 417 (595)
T 1fwx_A 339 DGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVG 417 (595)
T ss_dssp CTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCC
T ss_pred CCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCC
Confidence 9877 99999999999999998751 1 2222221001233 33443 577899998877 666
Q ss_pred -------EEEeccCCcceEEEcc--cCCCceeeeeeec
Q psy952 243 -------NRADKFNGRDYRVLRN--TTHRPYDIHVYHP 271 (573)
Q Consensus 243 -------~~~~~~~g~~~~~l~~--~~~~p~~i~v~~~ 271 (573)
..++. +|...+++.. ....|.+..|.+.
T Consensus 418 p~~~~~~ql~di-s~~~m~lv~d~p~~~ePh~~~i~~~ 454 (595)
T 1fwx_A 418 PLKPENDQLIDI-SGDKMVLVHDGPTFAEPHDAIAVHP 454 (595)
T ss_dssp SSCCEEEEEEEC-SSSSCEEEEEEEESSCCCCEEEECT
T ss_pred CCCCCcceEEEc-CCCcEEEEEEEcCCCCCCceEEccH
Confidence 45554 4444444422 1446666666553
No 141
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.91 E-value=4.9e-07 Score=91.82 Aligned_cols=192 Identities=13% Similarity=0.125 Sum_probs=136.2
Q ss_pred CCcceEEEEEEcCCCEEEEEECCC---------------CeEEEEEcCCC--cc-eEE-EcCC----CCCcceeEEeec-
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAA---------------KTIYRSRVGST--EK-ERV-IRHD----SHGLEGLAVDWV- 98 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~---------------~~I~~~~~~g~--~~-~~i-~~~~----~~~p~glavD~~- 98 (573)
.+..+.+|.+|. .++||+.|.+. .+|..+++... .. .++ +... -.....|+||..
T Consensus 85 ~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred ceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEeccc
Confidence 477799999995 89999999752 26889999765 32 222 1111 135678999932
Q ss_pred ------CCcEEEEeCCCCeEEEEEcC-CCceeEec----cC--------------CCCcceEEEeCC----CceEEEEec
Q psy952 99 ------GRKLYWLDRHSKQLDVAELD-GTNRKTLK----TA--------------IQDPRGITLHPG----IGYVYFSSW 149 (573)
Q Consensus 99 ------~~~LY~td~~~~~I~~~~ld-g~~~~~l~----~~--------------~~~P~~Iavdp~----~g~LYwtd~ 149 (573)
.+.+|+||.....|.|+++. |...+++. .. .....||||+|. .++|||.-.
T Consensus 164 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp TTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred CCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 56899999999999999986 44445442 11 124679999998 789999985
Q ss_pred CCcCeEEEEecc-------CCCcEEEEecCCC-CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC-----CcEEEEEeC
Q psy952 150 NLQAYIGKIGMD-------GSNFTRILTHEDD-IAWPNALTLDYFTERLYWADAHLDYIASVDLDG-----KHKHIVISG 216 (573)
Q Consensus 150 ~~~~~I~r~~ld-------G~~~~~l~~~~~~-l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG-----~~~~~l~~~ 216 (573)
+ ..+++++..+ ....+.+. ... .....++++|..++.||+++...+.|.+.+.++ .+..+|+..
T Consensus 244 s-s~~ly~V~T~~L~~~~~~~~v~~~G--~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d 320 (381)
T 3q6k_A 244 S-AIKVYSVNTKELKQKGGKLNPELLG--NRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS 320 (381)
T ss_dssp S-CSEEEEEEHHHHSSTTCCCCCEEEE--ECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC
T ss_pred C-CCcEEEEEHHHhhCcchhhceEEee--ecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC
Confidence 4 4567777631 22333343 221 223346888877899999999999999999988 456777775
Q ss_pred CccceeEEEeee-CCeEEEecCC
Q psy952 217 QKVPHVFALTLF-EDHIYWTDWN 238 (573)
Q Consensus 217 ~~~~~p~~ia~~-~~~lywtd~~ 238 (573)
.++..|.+|++. +++||++...
T Consensus 321 ~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 321 SRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp TTCCSEEEEEECTTSCEEEEECS
T ss_pred CCccccCeEEECCCCeEEEEECc
Confidence 568999999995 6789887644
No 142
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.90 E-value=5e-07 Score=88.65 Aligned_cols=217 Identities=9% Similarity=0.022 Sum_probs=146.4
Q ss_pred cccEEEEEc-CCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCc
Q psy952 24 KYYVRNMSL-DATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRK 101 (573)
Q Consensus 24 ~~~I~~i~l-~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~ 101 (573)
.+.|+.++. +|...- +.......+..+++.+. ++||++ ..+.|+.++.+|.....+-...-..+.++++.+ .++
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~-dG~ 89 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILFS--YSKGAKMITRDGRELWNIAAPAGCEMQTARILP-DGN 89 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEEE--CBSEEEEECTTSCEEEEEECCTTCEEEEEEECT-TSC
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEEe--CCCCEEEECCCCCEEEEEcCCCCccccccEECC-CCC
Confidence 578888998 454332 22222135778888874 556664 356788888876544433322112345566654 677
Q ss_pred EEEEeCC-CCeEEEEEcCCCceeEec--cC----CCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCC
Q psy952 102 LYWLDRH-SKQLDVAELDGTNRKTLK--TA----IQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD 174 (573)
Q Consensus 102 LY~td~~-~~~I~~~~ldg~~~~~l~--~~----~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~ 174 (573)
+++++.. .++|..++.+|+....+. .. ...|+++++++ +|.+++++.. ..+|...+.+|...-.+- ..
T Consensus 90 ~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~-~~~v~~~d~~G~~~w~~~--~~- 164 (276)
T 3no2_A 90 ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFA-TSEVREIAPNGQLLNSVK--LS- 164 (276)
T ss_dssp EEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETT-TTEEEEECTTSCEEEEEE--CS-
T ss_pred EEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecC-CCEEEEECCCCCEEEEEE--CC-
Confidence 8888876 788999999998765543 12 23588899988 5667777753 678999999976655544 22
Q ss_pred CCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeC----CccceeEEEee-eCCeEEEecCC----------
Q psy952 175 IAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISG----QKVPHVFALTL-FEDHIYWTDWN---------- 238 (573)
Q Consensus 175 l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~----~~~~~p~~ia~-~~~~lywtd~~---------- 238 (573)
..|.++++. .++.+++++...++|..++.+ |..+..+... ..+..|.++++ .++.||++++.
T Consensus 165 -~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~ 242 (276)
T 3no2_A 165 -GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGK 242 (276)
T ss_dssp -SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSC
T ss_pred -CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccC
Confidence 468888887 577888998888899999999 8777666532 12567899997 47899999963
Q ss_pred CCceEEEeccCCcc
Q psy952 239 TKSINRADKFNGRD 252 (573)
Q Consensus 239 ~~~I~~~~~~~g~~ 252 (573)
..+++.+++ +|+.
T Consensus 243 ~~~~~~~~~-~g~~ 255 (276)
T 3no2_A 243 HPQLVEIDS-EGKV 255 (276)
T ss_dssp CCSEEEECT-TSBE
T ss_pred CceEEEECC-CCCE
Confidence 335777763 5543
No 143
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.89 E-value=2.8e-07 Score=94.22 Aligned_cols=239 Identities=10% Similarity=-0.043 Sum_probs=143.5
Q ss_pred CEEEEEec------ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEEC---------CCCeEEEEEcCCCcc-e
Q psy952 17 PWLIFSNK------YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADV---------AAKTIYRSRVGSTEK-E 80 (573)
Q Consensus 17 ~~l~~s~~------~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~-~ 80 (573)
..||+++. +.|.+|++........+.....|. |++++.+++||+++. ..+.|.++++..... .
T Consensus 45 ~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~ 123 (386)
T 3sjl_D 45 RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTA 123 (386)
T ss_dssp TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEE
Confidence 46666764 479999988765543333344465 999999999999984 245788888876543 2
Q ss_pred EEEcCC------CCCcceeEEeecCCcEEEEeCC-CCeEEEEEcCCCcee-Eec-cC--CCCcce----EEEeCCCceEE
Q psy952 81 RVIRHD------SHGLEGLAVDWVGRKLYWLDRH-SKQLDVAELDGTNRK-TLK-TA--IQDPRG----ITLHPGIGYVY 145 (573)
Q Consensus 81 ~i~~~~------~~~p~glavD~~~~~LY~td~~-~~~I~~~~ldg~~~~-~l~-~~--~~~P~~----Iavdp~~g~LY 145 (573)
.|.... ...|.+|+|++.+++||+++.. .+.|.++++...... ++- .+ ...|.+ +++.+...++|
T Consensus 124 ~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 124 DIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp EEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEE
T ss_pred EEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEE
Confidence 232111 2479999999999999999964 689999998765433 331 11 112433 35566443333
Q ss_pred EEecCCcCeEEEEeccCCCcEEEEecCCCCCCCc--eEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-------
Q psy952 146 FSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPN--ALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG------- 216 (573)
Q Consensus 146 wtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~--glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~------- 216 (573)
++- ....++..... .++ ..-..|. ..+++..++++||... .++|+.+++.+...+++..-
T Consensus 204 v~~-~~~g~v~~~~~------~~~---~~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 204 VAF-GTEGTPEITHT------EVF---HPEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EEC-CSSSCCEEEEC------CCC---SCTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred EEC-CCCCeEEEeec------cee---ccccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceecccccc
Confidence 332 32223211100 011 1111222 2466656778777544 57899999987765443210
Q ss_pred ---C---ccceeEEEeeeCCeEEEecC---------CCCceEEEeccCCcceEEEcccCCCceeeee
Q psy952 217 ---Q---KVPHVFALTLFEDHIYWTDW---------NTKSINRADKFNGRDYRVLRNTTHRPYDIHV 268 (573)
Q Consensus 217 ---~---~~~~p~~ia~~~~~lywtd~---------~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v 268 (573)
. .-..+.++.-.+++||++.. ..++|..++..+++.+..+..+. .|.+|++
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lav 338 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINV 338 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEE
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEE
Confidence 0 01234566556889999853 13579999988888777665432 4556655
No 144
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.88 E-value=1e-09 Score=118.75 Aligned_cols=68 Identities=43% Similarity=0.852 Sum_probs=62.6
Q ss_pred ceecCCCcccCCCcccCCCCCCCCCCCCCCCccCCcCCCCCCcCCCCCCCccccCCccccCCCCCCCCCCCCCCCCC
Q psy952 415 EFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491 (573)
Q Consensus 415 ~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~~~C~~~~C~~~~~~C~~~~~~~c~~~~~~Cdg~~dC~d~sDe~~~~C 491 (573)
+|.|.+|.||+..|+|||..||.|+|||.. |.. |...+|+|. ++.|++..++|||..||.||+|| .+|
T Consensus 208 ~~~C~~~~ci~~~~~Cdg~~dC~d~sDE~~--C~~--c~~~~~~C~---~~~C~~~~~~cdG~~dC~~gsDE--~~C 275 (565)
T 2xrc_A 208 FFQCVNGKYISQMKACDGINDCGDQSDELC--CKA--CQGKGFHCK---SGVCIPSQYQCNGEVDCITGEDE--VGC 275 (565)
T ss_dssp -CBCTTSCBCCTTSTTSSSCCSSSSSSSSS--BSS--CSSSCEEET---TTEEECGGGTTSSSCCSSSCTTS--SSC
T ss_pred eeECCCCCccCHHHcCCCcccCCCCccccc--ccc--cCCCceecC---CCcccCccccCCCcccCCCCccc--cCc
Confidence 699999999999999999999999999987 753 888999998 67899999999999999999999 677
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.85 E-value=8.8e-07 Score=86.05 Aligned_cols=222 Identities=10% Similarity=0.044 Sum_probs=148.5
Q ss_pred cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC-CcceEEEcCC-CCCcceeEEeecCCc
Q psy952 24 KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS-TEKERVIRHD-SHGLEGLAVDWVGRK 101 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~i~~~~-~~~p~glavD~~~~~ 101 (573)
...|+.+++.+.....+......+.+++|.+.+..|+++. .+.|+.+++++ .....+.... ...+..+++.+.++.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred ceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 3578888888766555544455688999999888888875 56899999987 6555443222 246778999988888
Q ss_pred EEEEeCC---CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecC-CcCeEEEEeccCCCcEEEEecCCCCCC
Q psy952 102 LYWLDRH---SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWN-LQAYIGKIGMDGSNFTRILTHEDDIAW 177 (573)
Q Consensus 102 LY~td~~---~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~-~~~~I~r~~ldG~~~~~l~~~~~~l~~ 177 (573)
|+++... ...|+.+++.+...+.+.. ...+..+++.|...+|+++... ....|+.+++++.....+. ..-..
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~ 174 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT---HGEGR 174 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC---CSSSC
T ss_pred EEEEEeCCCCcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc---cCCCc
Confidence 8888732 5688888887766554443 2347888999988888866532 2346777777766554443 33345
Q ss_pred CceEEEeccCCeEEEEeC--CCCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEEecCC----------CCceE
Q psy952 178 PNALTLDYFTERLYWADA--HLDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTDWN----------TKSIN 243 (573)
Q Consensus 178 P~glaiD~~~~~LYw~D~--~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lywtd~~----------~~~I~ 243 (573)
+..+++++.+..|+++.. +...|+.++.++...+.+... ......+++ .+.+|+++... ...|+
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS--AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC--SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC--CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 678999988888888753 445788888777666554432 224455555 34556665432 24577
Q ss_pred EEeccCCcce
Q psy952 244 RADKFNGRDY 253 (573)
Q Consensus 244 ~~~~~~g~~~ 253 (573)
..+..+++..
T Consensus 253 ~~d~~~~~~~ 262 (297)
T 2ojh_A 253 LMDMDGGNVE 262 (297)
T ss_dssp EEETTSCSCE
T ss_pred EEecCCCCce
Confidence 7776555543
No 146
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.83 E-value=3.8e-07 Score=91.14 Aligned_cols=187 Identities=16% Similarity=0.099 Sum_probs=123.1
Q ss_pred EEEEEe--cccEEEEEcCCCceeecccCCcceEEEEEEcCCC-------EEEEEECC--CCeEEEEEcCC--CcceEE--
Q psy952 18 WLIFSN--KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKEN-------RFYFADVA--AKTIYRSRVGS--TEKERV-- 82 (573)
Q Consensus 18 ~l~~s~--~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~-------~ly~~d~~--~~~I~~~~~~g--~~~~~i-- 82 (573)
.++++. ...|..++|+|.....+. .+.+.+|++-+.-. .+|.++.. .++|..+.++. .....+
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 344443 468999999888765542 24556665544211 56889988 88888877653 223323
Q ss_pred ----EcCCCCCcceeEE--eecCCc--EEEEeCCCCeEEEEEc----CCCceeEec---cCCCCcceEEEeCCCceEEEE
Q psy952 83 ----IRHDSHGLEGLAV--DWVGRK--LYWLDRHSKQLDVAEL----DGTNRKTLK---TAIQDPRGITLHPGIGYVYFS 147 (573)
Q Consensus 83 ----~~~~~~~p~glav--D~~~~~--LY~td~~~~~I~~~~l----dg~~~~~l~---~~~~~P~~Iavdp~~g~LYwt 147 (573)
+...+..|.||++ +..++. +|+++.. ++++.+.+ +|.....++ .....|.++++|+..++||++
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe
Confidence 1244579999999 776664 7777765 78877655 232322333 233579999999999999999
Q ss_pred ecCCcCeEEEEeccCC--C-cEEEEe-cCCCCC-CCceEEEeccC---CeEEEEeCCCCeEEEEeCCCCc
Q psy952 148 SWNLQAYIGKIGMDGS--N-FTRILT-HEDDIA-WPNALTLDYFT---ERLYWADAHLDYIASVDLDGKH 209 (573)
Q Consensus 148 d~~~~~~I~r~~ldG~--~-~~~l~~-~~~~l~-~P~glaiD~~~---~~LYw~D~~~~~I~~~~~dG~~ 209 (573)
+.. ..|++++.+.. . .+.+.. ....+. .|.||+|.+.. ++|++++.+.+....++..+..
T Consensus 198 eEd--~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~ 265 (355)
T 3amr_A 198 EED--EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN 265 (355)
T ss_dssp ETT--TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC
T ss_pred ccc--ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC
Confidence 964 45999996532 2 333321 123444 78999997443 5899999999988888886543
No 147
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.83 E-value=1.4e-09 Score=70.94 Aligned_cols=34 Identities=47% Similarity=0.969 Sum_probs=31.5
Q ss_pred CCCCCceecCCCcccCCCcccCCCCCCCCCCCCCC
Q psy952 410 CDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 410 C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
|..+ +|+|.+|.||+..|+|||..||.|+|||..
T Consensus 2 C~~~-~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~ 35 (37)
T 1ajj_A 2 CSAF-EFHCLSGECIHSSWRCDGGPDCKDKSDEEN 35 (37)
T ss_dssp CCTT-CEECTTSCEECGGGTTSSSCCSTTCGGGTT
T ss_pred CCCC-ceEcCCCCeechhhccCCCCCCCCCccccC
Confidence 5566 999999999999999999999999999975
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.83 E-value=6.8e-07 Score=89.64 Aligned_cols=152 Identities=11% Similarity=0.022 Sum_probs=104.3
Q ss_pred EEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC-CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc
Q psy952 49 AMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD-SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT 127 (573)
Q Consensus 49 ~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~-~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~ 127 (573)
|+++. .++++|++....+.|+++++.+......+..+ ...|.++++++.++.||++....+.|.+.++.+......+.
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45555 47789999988899999998765433333322 22699999998888899999888999999997554333222
Q ss_pred --C-----CCCcceEEEeCCCceEEEEecC----------CcCeEEEEeccCCC----cEEEEecCCCCCCCceEEEecc
Q psy952 128 --A-----IQDPRGITLHPGIGYVYFSSWN----------LQAYIGKIGMDGSN----FTRILTHEDDIAWPNALTLDYF 186 (573)
Q Consensus 128 --~-----~~~P~~Iavdp~~g~LYwtd~~----------~~~~I~r~~ldG~~----~~~l~~~~~~l~~P~glaiD~~ 186 (573)
. ...|.+++++|...+||++... ....|...++.... ...+. .-..+.++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~d 158 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP----MPRQVYLMRAADD 158 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE----CCSSCCCEEECTT
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc----CCCcccceeECCC
Confidence 1 2348999999988899998732 13578888876421 12222 1225778889976
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCc
Q psy952 187 TERLYWADAHLDYIASVDLDGKH 209 (573)
Q Consensus 187 ~~~LYw~D~~~~~I~~~~~dG~~ 209 (573)
+. ||++. +.|..+++....
T Consensus 159 g~-l~~~~---~~i~~~d~~~~~ 177 (349)
T 1jmx_B 159 GS-LYVAG---PDIYKMDVKTGK 177 (349)
T ss_dssp SC-EEEES---SSEEEECTTTCC
T ss_pred Cc-EEEcc---CcEEEEeCCCCc
Confidence 66 88864 338888875443
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.79 E-value=6.2e-07 Score=87.15 Aligned_cols=201 Identities=13% Similarity=0.119 Sum_probs=137.3
Q ss_pred eeeCCCCCCEEEEEecccEEEEEcCC-CceeecccCC--cceEEEEEEcCCCEEEEEECC---CCeEEEEEcCCCcceEE
Q psy952 9 CKRRDSIKPWLIFSNKYYVRNMSLDA-TQYSLVHQDL--LNVVAMDFHYKENRFYFADVA---AKTIYRSRVGSTEKERV 82 (573)
Q Consensus 9 C~~~~~~~~~l~~s~~~~I~~i~l~g-~~~~~~~~~~--~~~~~v~~d~~~~~ly~~d~~---~~~I~~~~~~g~~~~~i 82 (573)
+.+......+|+++....|+.+++.+ .....+.... ..+..++|.+.++.|+++... ...|+.+++++.....+
T Consensus 46 ~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 46 APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC
T ss_pred eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe
Confidence 33333334577777788999999987 6655444332 456788999999999988743 46899999877665443
Q ss_pred EcCCCCCcceeEEeecCCcEEEEeCCCC--eEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEec-CCcCeEEEEe
Q psy952 83 IRHDSHGLEGLAVDWVGRKLYWLDRHSK--QLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSW-NLQAYIGKIG 159 (573)
Q Consensus 83 ~~~~~~~p~glavD~~~~~LY~td~~~~--~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~-~~~~~I~r~~ 159 (573)
... ..+..+++.+.++.|+++....+ .|+.+++.+.....+......+..++++|...+|+++.. .....|+.++
T Consensus 126 ~~~--~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 126 TKN--LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CSS--SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ecC--CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 322 34777788877888887665445 566666776666555555566889999998888887753 3356788888
Q ss_pred ccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCC----------CCeEEEEeCCCCcEEEEE
Q psy952 160 MDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAH----------LDYIASVDLDGKHKHIVI 214 (573)
Q Consensus 160 ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~----------~~~I~~~~~dG~~~~~l~ 214 (573)
+++.....+. ........+++++.+.+|+++... ...|+..++++...+.+.
T Consensus 204 ~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 204 VDGSSVERIT---DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp TTSSCEEECC---CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCCCCcEEEe---cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 7776655443 222344578888888888877543 256888898876654443
No 150
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.78 E-value=9.9e-07 Score=92.82 Aligned_cols=224 Identities=11% Similarity=0.082 Sum_probs=134.9
Q ss_pred EEEEe-cccEEEEEcCCCce----ee----cccC-----CcceEEEEEEcC---CCEEEEEECC--C----------CeE
Q psy952 19 LIFSN-KYYVRNMSLDATQY----SL----VHQD-----LLNVVAMDFHYK---ENRFYFADVA--A----------KTI 69 (573)
Q Consensus 19 l~~s~-~~~I~~i~l~g~~~----~~----~~~~-----~~~~~~v~~d~~---~~~ly~~d~~--~----------~~I 69 (573)
|+++. ...|++++.++... .- +..+ ...+.+|++++. ++.||++-.. . .+|
T Consensus 29 l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v 108 (463)
T 2wg3_C 29 LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRV 108 (463)
T ss_dssp EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEE
T ss_pred EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEE
Confidence 45555 46788887665421 11 1111 345789999985 6889987542 1 378
Q ss_pred EEEEcCCC--------cceEEEc----CCCCCcceeEEeecCCcEEEEeCC-----------------CCeEEEEEcCCC
Q psy952 70 YRSRVGST--------EKERVIR----HDSHGLEGLAVDWVGRKLYWLDRH-----------------SKQLDVAELDGT 120 (573)
Q Consensus 70 ~~~~~~g~--------~~~~i~~----~~~~~p~glavD~~~~~LY~td~~-----------------~~~I~~~~ldg~ 120 (573)
.|+.+... ..++|+. ...+....|++++ .++||++-.. .++|.|++++|.
T Consensus 109 ~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~ 187 (463)
T 2wg3_C 109 VEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD 187 (463)
T ss_dssp EEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC
T ss_pred EEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC
Confidence 88887531 2234432 2245667799997 5699998421 468999999994
Q ss_pred --------------------ceeEeccCCCCcceEEEeCCCc------eEEEEec-CC---cCeEEEEecc---CCCcEE
Q psy952 121 --------------------NRKTLKTAIQDPRGITLHPGIG------YVYFSSW-NL---QAYIGKIGMD---GSNFTR 167 (573)
Q Consensus 121 --------------------~~~~l~~~~~~P~~Iavdp~~g------~LYwtd~-~~---~~~I~r~~ld---G~~~~~ 167 (573)
..++...++.+|.+|++||.++ +||.+|. +. ...|.++... |....+
T Consensus 188 ~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~ 267 (463)
T 2wg3_C 188 MCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESEPSL 267 (463)
T ss_dssp CSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSCCCC
T ss_pred cccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCe
Confidence 2244557899999999999754 7888885 32 2345554221 111112
Q ss_pred EEecCCCC--CCCceEEEec------cCCeEEEEeCCCCeEEEEeCCCCc---EEEEE-eC-------CccceeEEEeee
Q psy952 168 ILTHEDDI--AWPNALTLDY------FTERLYWADAHLDYIASVDLDGKH---KHIVI-SG-------QKVPHVFALTLF 228 (573)
Q Consensus 168 l~~~~~~l--~~P~glaiD~------~~~~LYw~D~~~~~I~~~~~dG~~---~~~l~-~~-------~~~~~p~~ia~~ 228 (573)
+. ...- ..|.|+++-. ..+.+|+++.. ++|.++.++... ...++ .+ ....+|.+|++.
T Consensus 268 ~~--~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~ 344 (463)
T 2wg3_C 268 LE--FKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGED 344 (463)
T ss_dssp EE--CCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEEC
T ss_pred EE--eeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEEC
Confidence 22 1111 4678888842 23568999987 789999886532 22222 11 114689999985
Q ss_pred -CCeEEEecCC-------CCceEEEe
Q psy952 229 -EDHIYWTDWN-------TKSINRAD 246 (573)
Q Consensus 229 -~~~lywtd~~-------~~~I~~~~ 246 (573)
++.||++++. .++|+|+.
T Consensus 345 pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 345 ELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp TTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred CCCCEEEEeccCCcccCCCCcEEEec
Confidence 5789999873 45566553
No 151
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.78 E-value=3.3e-09 Score=71.71 Aligned_cols=36 Identities=36% Similarity=0.857 Sum_probs=32.6
Q ss_pred CCCCCCCceecCC-CcccCCCcccCCCCCCCCCCCCCC
Q psy952 408 RPCDKDTEFACRN-GHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 408 ~~C~~~~~f~C~~-g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
..|..+ +|+|.+ |+|||..|+|||..||.|+|||.+
T Consensus 5 ~~C~~~-~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (43)
T 2jm4_A 5 VKCSLG-YFPCGNITKCLPQLLHCNGVDDCGNQADEDN 41 (43)
T ss_dssp CSCCTT-EEECSSSSCEEEGGGTTSSCCCSSSCCTTSS
T ss_pred CCCCCC-eeECCCCCeEcCHhhccCCCCCCCCCcccCC
Confidence 456677 999999 899999999999999999999975
No 152
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.78 E-value=1e-09 Score=74.66 Aligned_cols=38 Identities=53% Similarity=1.212 Sum_probs=33.5
Q ss_pred CCCCCCceecCCCcccCCCcccCCCCCCCCCCCCCCCcc
Q psy952 409 PCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 447 (573)
Q Consensus 409 ~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~~~C 447 (573)
.|.++ +|+|.+|.|||..|+||+..||.|+|||....|
T Consensus 4 ~C~~~-~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~C 41 (44)
T 1j8e_A 4 SCSST-QFKCNSGRCIPEHWTCDGDNDCGDYSDETHANC 41 (44)
T ss_dssp SSCTT-EEECTTSCEEEGGGTTSSSCCSSSSGGGSHHHH
T ss_pred CCCCC-ceEeCCCCeEecCcccCCCCCCCCCCCCCCccc
Confidence 46677 999999999999999999999999999976333
No 153
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.78 E-value=1.1e-06 Score=86.23 Aligned_cols=192 Identities=9% Similarity=0.012 Sum_probs=131.5
Q ss_pred CEEEEEECCCCeEEEEEc-CCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccC-CCCcce
Q psy952 57 NRFYFADVAAKTIYRSRV-GSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTA-IQDPRG 134 (573)
Q Consensus 57 ~~ly~~d~~~~~I~~~~~-~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~-~~~P~~ 134 (573)
+++++++...+.|+.++. .|...-.+-......+.++++.+ .++||++ ..+.|..++++|..+..+... ...+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILFS--YSKGAKMITRDGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEEE--CBSEEEEECTTSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEEe--CCCCEEEECCCCCEEEEEcCCCCccccc
Confidence 466666666667777776 33333222222213678888886 4567774 356799999988766555432 234567
Q ss_pred EEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCC----CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcE
Q psy952 135 ITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD----IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHK 210 (573)
Q Consensus 135 Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~----l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~ 210 (573)
+++.+ +|.+++++.+...+|..++.+|.....+.. ... ...|.++++++ ++.+++++...++|..++.+|...
T Consensus 82 ~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~-~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~G~~~ 158 (276)
T 3no2_A 82 ARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEF-ETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPNGQLL 158 (276)
T ss_dssp EEECT-TSCEEEEEESTTEEEEEECTTSCEEEEEEE-CCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTTSCEE
T ss_pred cEECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEec-cCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCCCCEE
Confidence 78887 677788875435688888888886555431 122 23577888874 667888999999999999997766
Q ss_pred EEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 211 HIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 211 ~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
..+... ..|+++.+. ++.+++++...++|+.+++.+|+.+-.+.
T Consensus 159 w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 159 NSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 555433 357777764 67899999888899999988898776654
No 154
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.78 E-value=2.4e-09 Score=72.81 Aligned_cols=36 Identities=56% Similarity=1.252 Sum_probs=31.9
Q ss_pred CCCCCCCceecCCCcccCCCcccCCCCCCCCCCCCCC
Q psy952 408 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 408 ~~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
..|..+ +|+|.+|+|||..|+||+..||.|+|||..
T Consensus 6 ~~C~~~-~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (44)
T 3a7q_B 6 KECEKD-QFQCRNERCIPSVWRCDEDDDCLDHSDEDD 41 (44)
T ss_dssp --CCTT-EEECTTSCEEEGGGTTSSSCCSSSSTTTSC
T ss_pred CCCCCC-ceEcCCCCEeChhhccCCCCCCCCCccccC
Confidence 356677 999999999999999999999999999975
No 155
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.78 E-value=1.2e-09 Score=76.17 Aligned_cols=36 Identities=53% Similarity=1.141 Sum_probs=33.0
Q ss_pred CCCCCCCceecCCCcccCCCcccCCCCCCCCCCCCCC
Q psy952 408 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 408 ~~C~~~~~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
..|.++ +|+|.+|+|||..|+|||.+||.|+|||.+
T Consensus 5 ~~C~~~-~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~ 40 (52)
T 2m0p_A 5 ASCLDT-QYTCDNHQCISKNWVCDTDNDCGDGSDEKN 40 (52)
T ss_dssp CSSCSS-EEECTTCCEEETTSTTSSSCSSSSCHHHHS
T ss_pred CCCCCC-ceECCCCCEEecCccCCCCCCCCCCCcccc
Confidence 357777 999999999999999999999999999975
No 156
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.77 E-value=2.9e-07 Score=94.01 Aligned_cols=206 Identities=11% Similarity=-0.042 Sum_probs=126.4
Q ss_pred CCEEEEEECCCC----eEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeC---------CCCeEEEEEcCCCce
Q psy952 56 ENRFYFADVAAK----TIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDR---------HSKQLDVAELDGTNR 122 (573)
Q Consensus 56 ~~~ly~~d~~~~----~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~---------~~~~I~~~~ldg~~~ 122 (573)
..++|+++...+ .|..++++.......+..+ ..| ++++++.++.||+++. ..+.|.++|+.....
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 468999998776 7888888765443334445 468 9999999999999983 357899999875443
Q ss_pred -eEeccC-------CCCcceEEEeCCCceEEEEecCCcCeEEE--EeccC-------------------------CCcEE
Q psy952 123 -KTLKTA-------IQDPRGITLHPGIGYVYFSSWNLQAYIGK--IGMDG-------------------------SNFTR 167 (573)
Q Consensus 123 -~~l~~~-------~~~P~~Iavdp~~g~LYwtd~~~~~~I~r--~~ldG-------------------------~~~~~ 167 (573)
..+.-+ ...|++|+++|..++||+++......|.+ +++.. ..+..
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~ 188 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLA 188 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEE
Confidence 333211 35799999999999999998643344444 33311 00011
Q ss_pred EEecCC------CC-----------CCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCC--------cccee
Q psy952 168 ILTHED------DI-----------AWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQ--------KVPHV 222 (573)
Q Consensus 168 l~~~~~------~l-----------~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~--------~~~~p 222 (573)
++.... .+ ..|. + .+..+++||+.. +.|..++..+...+++..-. ....|
T Consensus 189 ~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred EEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 111000 00 1122 2 445677788776 88888888765444332110 01234
Q ss_pred EE-----EeeeCCeEEEecC---C-----CCceEEEeccCCcceEEEcccCCCceeeeee
Q psy952 223 FA-----LTLFEDHIYWTDW---N-----TKSINRADKFNGRDYRVLRNTTHRPYDIHVY 269 (573)
Q Consensus 223 ~~-----ia~~~~~lywtd~---~-----~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~ 269 (573)
.+ ++-++++||++.. . ...+..++..+++.+..|..+. .|.+|.+-
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s 322 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAA 322 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEEC
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEEC
Confidence 44 4446788999865 2 2456688877777665554332 56666654
No 157
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.77 E-value=5.4e-09 Score=69.04 Aligned_cols=34 Identities=41% Similarity=0.971 Sum_probs=30.8
Q ss_pred CCCCCceecCC--CcccCCCcccCCCCCCCCCCCCCC
Q psy952 410 CDKDTEFACRN--GHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 410 C~~~~~f~C~~--g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
|.+. +|+|.+ |+|||..|+|||..||.|+|||..
T Consensus 1 C~~~-~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~ 36 (39)
T 3dpr_E 1 CRIH-EISCGAHSTQCIPVSWRCDGENDCDSGEDEEN 36 (39)
T ss_dssp CCTT-TCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTT
T ss_pred CCCC-ceecCCCCCCEeCccccCCCcccCcCCccccc
Confidence 4456 899997 899999999999999999999975
No 158
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.76 E-value=5.4e-09 Score=70.27 Aligned_cols=35 Identities=57% Similarity=1.186 Sum_probs=31.4
Q ss_pred CCCCCCceecC-CCcccCCCcccCCCCCCCCCCCCCC
Q psy952 409 PCDKDTEFACR-NGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 409 ~C~~~~~f~C~-~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
.|..+ +|+|. +|.|||..|+|||..||.|+|||..
T Consensus 3 ~C~~~-~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~ 38 (42)
T 1cr8_A 3 GCHTD-EFQCRLDGLCIPLRWRCDGDTDCMDSSDEKS 38 (42)
T ss_dssp CSSTT-CEECTTTCCEECGGGSSSSSCCSSSSTTTTT
T ss_pred CCCCC-ceEeCCCCeEcChhhcCCCCcCCCCCCcccC
Confidence 46666 99998 4899999999999999999999975
No 159
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.74 E-value=5.2e-06 Score=85.12 Aligned_cols=202 Identities=8% Similarity=-0.010 Sum_probs=122.1
Q ss_pred CEEEEEe-----------cccEEEEEcCCCcee--eccc------CCcceEEEEEEcCCCEEEEEECC-CCeEEEEEcCC
Q psy952 17 PWLIFSN-----------KYYVRNMSLDATQYS--LVHQ------DLLNVVAMDFHYKENRFYFADVA-AKTIYRSRVGS 76 (573)
Q Consensus 17 ~~l~~s~-----------~~~I~~i~l~g~~~~--~~~~------~~~~~~~v~~d~~~~~ly~~d~~-~~~I~~~~~~g 76 (573)
.+|++++ .+.|.++++...... +.+. ....|.++++++.+++||+++.. .+.|..++ .+
T Consensus 78 ~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t 156 (373)
T 2mad_H 78 SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG 156 (373)
T ss_pred CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence 4777775 246888888654332 2121 02458899999999999999875 67899998 65
Q ss_pred CcceEE-EcCCCCCcceeEE------------------------------------------------eecCCcEEEEeC
Q psy952 77 TEKERV-IRHDSHGLEGLAV------------------------------------------------DWVGRKLYWLDR 107 (573)
Q Consensus 77 ~~~~~i-~~~~~~~p~glav------------------------------------------------D~~~~~LY~td~ 107 (573)
...... +.. |..+.+ ...++.+||..
T Consensus 157 ~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~- 231 (373)
T 2mad_H 157 GSSDDQLLSS----PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV- 231 (373)
T ss_pred CCEEeEEcCC----CceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-
Confidence 433212 211 111111 22223344443
Q ss_pred CCCeEEEEEcCCCceeEec-----c-----CCCCcce---EEEeCCCceEEEEecC--------CcCeEEEEeccCCCcE
Q psy952 108 HSKQLDVAELDGTNRKTLK-----T-----AIQDPRG---ITLHPGIGYVYFSSWN--------LQAYIGKIGMDGSNFT 166 (573)
Q Consensus 108 ~~~~I~~~~ldg~~~~~l~-----~-----~~~~P~~---Iavdp~~g~LYwtd~~--------~~~~I~r~~ldG~~~~ 166 (573)
..+.|.++++.+...+++. . ....|.+ ++++|..+.||++... ....|.++++......
T Consensus 232 ~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv 311 (373)
T 2mad_H 232 YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS 311 (373)
T ss_pred CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEE
Confidence 2345666666543322211 0 1113555 8999999999998632 1347888888654432
Q ss_pred EEEecCCCCCCCceEEEeccCC-eEEEEeCCCCeEEEEeCCCCcEEEE-EeCCccceeEEEeeeC
Q psy952 167 RILTHEDDIAWPNALTLDYFTE-RLYWADAHLDYIASVDLDGKHKHIV-ISGQKVPHVFALTLFE 229 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~-~LYw~D~~~~~I~~~~~dG~~~~~l-~~~~~~~~p~~ia~~~ 229 (573)
.-+ ..-..|.+|+++++++ +||.+....+.|..++......... ..- -..|.+|.+++
T Consensus 312 ~~i---~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~v--G~~P~~~~~~~ 371 (373)
T 2mad_H 312 SQI---SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVEL--GSGPQVLSVMN 371 (373)
T ss_pred EEE---ECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCC--CCCCcEEEEcc
Confidence 222 1223699999999888 7888887889999999976554333 321 24688887654
No 160
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.73 E-value=2.6e-06 Score=88.70 Aligned_cols=194 Identities=12% Similarity=0.040 Sum_probs=137.2
Q ss_pred CEEEEEec----ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECC--CCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFSNK----YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVA--AKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~~----~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
.+|+++.. ..|+.+++.+.....+......+.+++|.+.+++|+++... ...|+.+++.+.....+.. ....+
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-~~~~~ 269 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-GRSNN 269 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC-CSSCE
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC-CCCcc
Confidence 35555543 37889999766655444444567899999988889987654 3469999998765544333 23467
Q ss_pred ceeEEeecCCcEEEEeCCC--CeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCC-cCeEEEEeccCCCcEE
Q psy952 91 EGLAVDWVGRKLYWLDRHS--KQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL-QAYIGKIGMDGSNFTR 167 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~--~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~-~~~I~r~~ldG~~~~~ 167 (573)
..+++.+.++.|+++.... .+|+++++++...+.+.........++++|...+|+++.... ...|...++++...+.
T Consensus 270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV 349 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE
T ss_pred cceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE
Confidence 7888888888888876433 379999998776555544444577899999888898886432 3589999998776554
Q ss_pred EEecCCCCCCCceEEEeccCCeEEEEeCCCC--eEEEEeCCCCcEEEEEe
Q psy952 168 ILTHEDDIAWPNALTLDYFTERLYWADAHLD--YIASVDLDGKHKHIVIS 215 (573)
Q Consensus 168 l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~--~I~~~~~dG~~~~~l~~ 215 (573)
+. .. .....+++.+.+..|+++....+ .|+.++++|...+.|..
T Consensus 350 l~---~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 350 LS---ST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp CC---CS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred ec---CC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 43 22 26788999988888888765444 79999999887766543
No 161
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.73 E-value=4.2e-07 Score=96.94 Aligned_cols=194 Identities=9% Similarity=0.068 Sum_probs=131.0
Q ss_pred CCCEEEEEECCCCeEEEEEcCCCcceEEEcC-CCCCcceeEE-e-ecCCcEEEEe-----------------CCCCeEEE
Q psy952 55 KENRFYFADVAAKTIYRSRVGSTEKERVIRH-DSHGLEGLAV-D-WVGRKLYWLD-----------------RHSKQLDV 114 (573)
Q Consensus 55 ~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~-~~~~p~glav-D-~~~~~LY~td-----------------~~~~~I~~ 114 (573)
.+++||+.|..+.+|.|++++......++.. ....|.|+++ . +.+++||.+. ...+.|.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 4789999999999999999997655444433 2368999998 4 7899999994 22357888
Q ss_pred EEcCCCceeE-eccCCCCcceEEEeCCCceEEEEecCCc-------------CeEEEEec--------cCCC----cEEE
Q psy952 115 AELDGTNRKT-LKTAIQDPRGITLHPGIGYVYFSSWNLQ-------------AYIGKIGM--------DGSN----FTRI 168 (573)
Q Consensus 115 ~~ldg~~~~~-l~~~~~~P~~Iavdp~~g~LYwtd~~~~-------------~~I~r~~l--------dG~~----~~~l 168 (573)
++.+...+.. +.-+. +|.+++++|..+++|+|..... ..|.+.+. +|.. ...+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 8887543322 22233 8999999999999999985431 11221111 1110 0111
Q ss_pred EecC-----------CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCc----------EEEEEeCCccceeEEEee
Q psy952 169 LTHE-----------DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH----------KHIVISGQKVPHVFALTL 227 (573)
Q Consensus 169 ~~~~-----------~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~----------~~~l~~~~~~~~p~~ia~ 227 (573)
+... ..-..|.|+.+.+++.+||+++...++|..++++... ..++..-..-..|..+++
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF 338 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF 338 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence 1100 1124799999999999999999999999999988431 012222110247999999
Q ss_pred e-CCeEEEecCCCCceEEEeccC
Q psy952 228 F-EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 228 ~-~~~lywtd~~~~~I~~~~~~~ 249 (573)
. ++++|.+.+-.+.|...+...
T Consensus 339 ~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 339 DGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCeEEEEEecCCcEEEEEhhH
Confidence 5 358999999999998887433
No 162
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.70 E-value=4e-09 Score=73.18 Aligned_cols=38 Identities=37% Similarity=0.770 Sum_probs=34.2
Q ss_pred CCCCCCCCCCceecCCC-cccCCCcccCCCCCCCCCCCCCC
Q psy952 405 CHNRPCDKDTEFACRNG-HCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 405 C~~~~C~~~~~f~C~~g-~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
|+ ..|.++ +|+|.+| +||+..|+||+..||.|+|||..
T Consensus 3 C~-~~C~~~-~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~ 41 (48)
T 2i1p_A 3 MV-LNCTSA-QFKCADGSSCINSRYRCDGVYDCRDNSDEAG 41 (48)
T ss_dssp SC-CCCCSS-SEECSSSSCEECGGGSSSSSCCSSSSHHHHS
T ss_pred CC-CCCCCC-eeECCCCCEeCCHhhcCCCCCCCCCCccccc
Confidence 54 567777 9999999 89999999999999999999975
No 163
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.69 E-value=1.5e-06 Score=89.74 Aligned_cols=195 Identities=10% Similarity=0.010 Sum_probs=130.0
Q ss_pred cCCCEEEEEECCCCeEEEEEcCCC----cceEEE-------cCCCCCcceeEEeecCCcEEEEeCCC------CeEEEEE
Q psy952 54 YKENRFYFADVAAKTIYRSRVGST----EKERVI-------RHDSHGLEGLAVDWVGRKLYWLDRHS------KQLDVAE 116 (573)
Q Consensus 54 ~~~~~ly~~d~~~~~I~~~~~~g~----~~~~i~-------~~~~~~p~glavD~~~~~LY~td~~~------~~I~~~~ 116 (573)
..+++||+....+++|+.+++... ....++ ..+...|.+++.-+.+ ||++..+. +.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 678999999999999999998643 122223 2245688888888654 99987554 7899999
Q ss_pred cCCCce-eEeccC-C--CCcceEEEeCCCceEEEEecC-----------------CcCeEEEEeccCCCcEEEEecCCCC
Q psy952 117 LDGTNR-KTLKTA-I--QDPRGITLHPGIGYVYFSSWN-----------------LQAYIGKIGMDGSNFTRILTHEDDI 175 (573)
Q Consensus 117 ldg~~~-~~l~~~-~--~~P~~Iavdp~~g~LYwtd~~-----------------~~~~I~r~~ldG~~~~~l~~~~~~l 175 (573)
..+... ..+..+ . ..+.++.+.|..+.||.++|+ ...+|...+++.......+.....-
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 875443 333311 1 235668889999999999985 2468888888754222222101112
Q ss_pred CCCceEEE--eccCCeEEEEeC-----CCCeEEEEeCCCCcE---EEEEeCC-----cc-----------ceeEEEee--
Q psy952 176 AWPNALTL--DYFTERLYWADA-----HLDYIASVDLDGKHK---HIVISGQ-----KV-----------PHVFALTL-- 227 (573)
Q Consensus 176 ~~P~glai--D~~~~~LYw~D~-----~~~~I~~~~~dG~~~---~~l~~~~-----~~-----------~~p~~ia~-- 227 (573)
..|..|.+ ++.+..+|++.. ..+.|.++.+++..- +++-... .+ ..|.+|.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 35777766 888999999988 788888877765322 1110000 01 34666666
Q ss_pred eCCeEEEecCCCCceEEEeccCC
Q psy952 228 FEDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 228 ~~~~lywtd~~~~~I~~~~~~~g 250 (573)
++.+||+++|..+.|..++..+.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSST
T ss_pred CCCEEEEEeCCCCEEEEEEecCC
Confidence 57789999999999988875433
No 164
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.69 E-value=2.4e-06 Score=85.30 Aligned_cols=184 Identities=14% Similarity=0.165 Sum_probs=118.4
Q ss_pred EEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecC---C----cEEEEeCC--CCeEEEEEcCCC--ceeEec-
Q psy952 59 FYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVG---R----KLYWLDRH--SKQLDVAELDGT--NRKTLK- 126 (573)
Q Consensus 59 ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~---~----~LY~td~~--~~~I~~~~ldg~--~~~~l~- 126 (573)
++++-...+.|+.++++|.....+ . ..+++++.+-+-- + .+|.++.. .++|.++.++.. ..+.+.
T Consensus 42 ~ii~t~k~~gL~Vydl~G~~l~~~-~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDGKMLHSY-N--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEE-C--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred EEEEEcCCCCEEEEcCCCcEEEEc-c--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 344433346788888877665543 2 2466776665411 1 47999988 899999977632 233331
Q ss_pred ------cCCCCcceEEE--eCCCc--eEEEEecCCcCeEEEEec----cCCCcEEEEecCCCCCCCceEEEeccCCeEEE
Q psy952 127 ------TAIQDPRGITL--HPGIG--YVYFSSWNLQAYIGKIGM----DGSNFTRILTHEDDIAWPNALTLDYFTERLYW 192 (573)
Q Consensus 127 ------~~~~~P~~Iav--dp~~g--~LYwtd~~~~~~I~r~~l----dG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw 192 (573)
+.+..|.||++ +|..+ ++|+++. .+.+....+ +|.....++.....-..|.|+++|...++||+
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k--~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK--EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECS--SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECC--CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEE
Confidence 34578999999 88767 5777763 456665444 23222222211122346889999999999999
Q ss_pred EeCCCCeEEEEeCC--CC-cEEEEEe--CCcc-ceeEEEeee-C----CeEEEecCCCCceEEEecc
Q psy952 193 ADAHLDYIASVDLD--GK-HKHIVIS--GQKV-PHVFALTLF-E----DHIYWTDWNTKSINRADKF 248 (573)
Q Consensus 193 ~D~~~~~I~~~~~d--G~-~~~~l~~--~~~~-~~p~~ia~~-~----~~lywtd~~~~~I~~~~~~ 248 (573)
++...+ |++++.+ +. .++++.. ...+ ..+.||+++ . ++||+++.++++...++..
T Consensus 197 ~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999855 9999955 32 2344432 1113 379999985 3 4899999888887777753
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.68 E-value=3.4e-06 Score=93.12 Aligned_cols=233 Identities=10% Similarity=0.020 Sum_probs=144.7
Q ss_pred EEEEe--cccEEEEEcC--C-Cceeeccc-----CCcceEEEEEEcCCCEEEEEECC---------CCeEEEEEcCC---
Q psy952 19 LIFSN--KYYVRNMSLD--A-TQYSLVHQ-----DLLNVVAMDFHYKENRFYFADVA---------AKTIYRSRVGS--- 76 (573)
Q Consensus 19 l~~s~--~~~I~~i~l~--g-~~~~~~~~-----~~~~~~~v~~d~~~~~ly~~d~~---------~~~I~~~~~~g--- 76 (573)
|+|+. ...|+.++++ | .....+.. ....+.+++|.+.++.|+++... ...|+++++++
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 66775 3579999988 4 44443333 23457789999999999887643 14899999988
Q ss_pred ---CcceEEEcCCCCCcceeEEeecCCcEEEEeCCC-------CeEEEEEcCC-C---ceeEeccC-CCCcceEEEeCCC
Q psy952 77 ---TEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHS-------KQLDVAELDG-T---NRKTLKTA-IQDPRGITLHPGI 141 (573)
Q Consensus 77 ---~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~-------~~I~~~~ldg-~---~~~~l~~~-~~~P~~Iavdp~~ 141 (573)
+..+.+...+.....++++.+.++.|+|+.... ..|++.++++ . ..+.+... ...+..+++.|..
T Consensus 174 ~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 174 ADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp TCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred ccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 554433303335677788999899999876432 4799999984 3 33444443 4568889999966
Q ss_pred ceEEEE-ecCCcCeEEEEeccCCCcEEEEecCCCCCC------CceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEE
Q psy952 142 GYVYFS-SWNLQAYIGKIGMDGSNFTRILTHEDDIAW------PNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVI 214 (573)
Q Consensus 142 g~LYwt-d~~~~~~I~r~~ldG~~~~~l~~~~~~l~~------P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~ 214 (573)
. ||++ +......|++.++++...+.+......... ...+++.+.+..+|.+..+..+|+.+++++...+.|.
T Consensus 254 ~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 254 S-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp C-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECC
T ss_pred e-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEec
Confidence 6 5555 432234899999866555444411111111 2456665444444444334457888899877665553
Q ss_pred eCCccceeEEE-eeeCCeEEEecCCC---CceEEEeccCCcceE
Q psy952 215 SGQKVPHVFAL-TLFEDHIYWTDWNT---KSINRADKFNGRDYR 254 (573)
Q Consensus 215 ~~~~~~~p~~i-a~~~~~lywtd~~~---~~I~~~~~~~g~~~~ 254 (573)
.. .....++ +..++.++++-... ..|++++..+++.+.
T Consensus 333 ~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 333 GP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp SS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred CC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 32 2344556 67777776653332 367888765555433
No 166
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.66 E-value=3.6e-09 Score=97.03 Aligned_cols=49 Identities=37% Similarity=0.796 Sum_probs=39.6
Q ss_pred CCcCCCceeeCC--CCceecCCcCcCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q psy952 523 ITCPPHHLKCAN--TNICVEPYWLCDGDNDCGDMSDEDPLHCQQR-TCPQNSF 572 (573)
Q Consensus 523 ~~C~~~~f~C~~--~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~~-~c~~~~f 572 (573)
..|.+.+|+|.+ | .|||.+|+|||.+||+|||||.+.+|... +|...+|
T Consensus 52 ~~C~~~~F~C~~~~g-~CI~~~~~CDG~~DC~DgSDE~~~~C~~~~~~~~~~~ 103 (217)
T 2gtl_M 52 HHCDEHESECRGDVP-ECIHDLLFCDGEKDCRDGSDEDPETCSLNITHVGSSY 103 (217)
T ss_dssp CCCCTTEEECSSSSC-CEEEGGGTTSSSCCSSSSTTTSHHHHCCGGGCTTCEE
T ss_pred CCCCCCceecCCCCC-cEechhhccCCCCCCCCCCccccCcCCCCcccCCccc
Confidence 468899999975 6 99999999999999999999975468765 4444433
No 167
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.66 E-value=7.8e-09 Score=71.44 Aligned_cols=35 Identities=40% Similarity=1.003 Sum_probs=31.9
Q ss_pred CCCCCCceecC-----CCcccCCCcccCCCCCCCCCCCCCC
Q psy952 409 PCDKDTEFACR-----NGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 409 ~C~~~~~f~C~-----~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
.|.+. +|+|. +|+|||..|+|||..||.|+|||.+
T Consensus 6 ~C~~~-~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~ 45 (47)
T 1k7b_A 6 SCPPG-QFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 45 (47)
T ss_dssp CCSTT-EECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGG
T ss_pred CCCCC-ceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCC
Confidence 46677 99998 7899999999999999999999975
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.65 E-value=2.4e-06 Score=87.20 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=72.5
Q ss_pred CCEEEEEECC-----CCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeC---------CCCeEEEEEcCCCc
Q psy952 56 ENRFYFADVA-----AKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDR---------HSKQLDVAELDGTN 121 (573)
Q Consensus 56 ~~~ly~~d~~-----~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~---------~~~~I~~~~ldg~~ 121 (573)
.++||+++.. .+.|+++++........+..+ ..| +|++++.++.||+++. ..+.|.++++....
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 4578888753 457888887544333334344 468 9999999999999984 23569999986433
Q ss_pred -eeEec-c-----CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC
Q psy952 122 -RKTLK-T-----AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 122 -~~~l~-~-----~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
...+. . ....|.+|+++|..++||+++.+....|..++++.
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 33332 1 23579999999999999999864345677776653
No 169
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.65 E-value=1.2e-08 Score=71.13 Aligned_cols=36 Identities=39% Similarity=1.059 Sum_probs=32.4
Q ss_pred CCCCCCCceecC-CCcccCCCcccCCCCCCCCCCCCCC
Q psy952 408 RPCDKDTEFACR-NGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 408 ~~C~~~~~f~C~-~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
..|.+. +|+|. +|+|||..|+|||..||.|+|||..
T Consensus 5 ~~C~~~-~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~ 41 (50)
T 2knx_A 5 KTCGPS-SFSCPGTHVCVPERWLCDGDKDCADGADESI 41 (50)
T ss_dssp CTTCTT-EEEETTTTEEEETTTTTSSSCCSTTCGGGSG
T ss_pred CCCCCC-cEEcCCCCeEcChhhcCCCCCCCCCCCcccc
Confidence 356677 99995 9999999999999999999999975
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.58 E-value=6.6e-06 Score=83.97 Aligned_cols=233 Identities=12% Similarity=0.018 Sum_probs=140.0
Q ss_pred CEEEEEec-c---cEEEEEcCCCceeecccCCcce-EEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 17 PWLIFSNK-Y---YVRNMSLDATQYSLVHQDLLNV-VAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 17 ~~l~~s~~-~---~I~~i~l~g~~~~~~~~~~~~~-~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
.+|+++.. . .|+.+++++.....+....... .+++|.+.+++|+++... ..|+++++.+.....+.........
T Consensus 48 ~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~~~~~~~~~ 126 (388)
T 3pe7_A 48 SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVYQVPAEWVG 126 (388)
T ss_dssp CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEECCTTEEE
T ss_pred CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeeeechhhccc
Confidence 35666543 3 3999999887766554443333 367899999999998754 5899999987665555432211111
Q ss_pred e--eEEeecCCcEEEE---------------------eCCCCeEEEEEcCCCceeEeccCCCCcceEEEeC-CCceEEEE
Q psy952 92 G--LAVDWVGRKLYWL---------------------DRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHP-GIGYVYFS 147 (573)
Q Consensus 92 g--lavD~~~~~LY~t---------------------d~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp-~~g~LYwt 147 (573)
. .++++.+..|+.. ......|+++++.+...+.+.........++++| ....|+++
T Consensus 127 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~ 206 (388)
T 3pe7_A 127 YGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFC 206 (388)
T ss_dssp EEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred ccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEE
Confidence 1 2234334444322 1233578999998777666665555678899999 77777666
Q ss_pred ecCC----cCeEEEEeccCCCcEEEEecCCCC-CCCceEEEeccCCeEEEEeC-CCC---eEEEEeCCCCcEEEEEeCCc
Q psy952 148 SWNL----QAYIGKIGMDGSNFTRILTHEDDI-AWPNALTLDYFTERLYWADA-HLD---YIASVDLDGKHKHIVISGQK 218 (573)
Q Consensus 148 d~~~----~~~I~r~~ldG~~~~~l~~~~~~l-~~P~glaiD~~~~~LYw~D~-~~~---~I~~~~~dG~~~~~l~~~~~ 218 (573)
..+. ...|+.++++|...+.+. ...- .....+++.+++.+|+++.. ... .|+.+++++...+.+.....
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 284 (388)
T 3pe7_A 207 HEGPHDLVDARMWLINEDGTNMRKVK--THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA 284 (388)
T ss_dssp ECSCTTTSSCSEEEEETTSCCCEESC--CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECC
T ss_pred EecCCCCCcceEEEEeCCCCceEEee--eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCC
Confidence 5332 448999999988776655 2211 12345788888888866433 222 39999998877766544211
Q ss_pred cce----eE--EEeeeCCeEEEec--------CCCCceEEEeccCCcc
Q psy952 219 VPH----VF--ALTLFEDHIYWTD--------WNTKSINRADKFNGRD 252 (573)
Q Consensus 219 ~~~----p~--~ia~~~~~lywtd--------~~~~~I~~~~~~~g~~ 252 (573)
..+ +. .+..++..|+++- .....|+.++..+++.
T Consensus 285 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 285 CSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred ceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 101 11 2334556666542 4456788888655543
No 171
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.56 E-value=6.1e-06 Score=83.75 Aligned_cols=150 Identities=12% Similarity=0.186 Sum_probs=107.0
Q ss_pred cceEEEEEE-cC------CCEEEEEECCCCeEEEEEcCCCcceEEEc-------------CC-----CCCcceeEEeec-
Q psy952 45 LNVVAMDFH-YK------ENRFYFADVAAKTIYRSRVGSTEKERVIR-------------HD-----SHGLEGLAVDWV- 98 (573)
Q Consensus 45 ~~~~~v~~d-~~------~~~ly~~d~~~~~I~~~~~~g~~~~~i~~-------------~~-----~~~p~glavD~~- 98 (573)
.....|++| .. ++.+|++|.....|.++++.......+.. .+ .....|||+.+.
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 457788888 32 67899999988899999987643322331 11 136778999887
Q ss_pred ---CCcEEEEeCCCCeEEEEEc---C-C---CceeEeccCC--CCcceEEEeCCCceEEEEecCCcCeEEEEeccC----
Q psy952 99 ---GRKLYWLDRHSKQLDVAEL---D-G---TNRKTLKTAI--QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG---- 162 (573)
Q Consensus 99 ---~~~LY~td~~~~~I~~~~l---d-g---~~~~~l~~~~--~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG---- 162 (573)
++.|||.-....+++++.. . . ...+.+.... .+..++++|+.+|.||+++.. ...|.+.+.++
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~-~~aI~~w~~~~~~~~ 310 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN-TKQVSCWNTQKMPLR 310 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS-SSEEEEEETTSCSBC
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc-CCeEEEEeCCCCccc
Confidence 7899999987778888763 2 2 1222233322 344578898779999999965 67899999887
Q ss_pred -CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCC
Q psy952 163 -SNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL 197 (573)
Q Consensus 163 -~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~ 197 (573)
.+..+|+. ...|.||.+|+|| .++.||+.....
T Consensus 311 ~~n~~~l~~-d~~l~~pd~~~i~-~~g~Lwv~sn~l 344 (381)
T 3q6k_A 311 MKNTDVVYT-SSRFVFGTDISVD-SKGGLWFMSNGF 344 (381)
T ss_dssp GGGEEEEEE-CTTCCSEEEEEEC-TTSCEEEEECSC
T ss_pred cCceEEEEE-CCCccccCeEEEC-CCCeEEEEECcc
Confidence 34566665 4589999999999 467899987554
No 172
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.54 E-value=3.7e-08 Score=68.03 Aligned_cols=35 Identities=40% Similarity=0.991 Sum_probs=31.5
Q ss_pred CCCCCCceecC-----CCcccCCCcccCCCCCCCCCCCCCC
Q psy952 409 PCDKDTEFACR-----NGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 409 ~C~~~~~f~C~-----~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
.|.++ +|+|. +++|||..|+||++.||.|+|||.+
T Consensus 4 ~C~~~-~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~ 43 (47)
T 1jrf_A 4 RCPPG-QFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 43 (47)
T ss_dssp CCCCC-CSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHH
T ss_pred CCCCC-eeECCCCCCCCCeEcCHhhcCCCCcCCCCCccccc
Confidence 46667 99998 6899999999999999999999965
No 173
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.47 E-value=0.00067 Score=66.87 Aligned_cols=238 Identities=8% Similarity=-0.019 Sum_probs=150.3
Q ss_pred CCceeeCCCCCCEEEEEecccEEEEEcCCCce----eecc--cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc
Q psy952 6 ESTCKRRDSIKPWLIFSNKYYVRNMSLDATQY----SLVH--QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK 79 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~----~~~~--~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 79 (573)
..++.+......+|+.+....|+..++..... ..+. .....+..++|.+..+.|+... ..+.|..+++.....
T Consensus 53 ~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLAAPTP 131 (337)
T ss_dssp CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECCCC--
T ss_pred ceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCCc
Confidence 34455544445677777777888888865422 1111 2345688999998766666654 557899999876542
Q ss_pred --eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeE-eccCCCCcceEEEeCCCceEEEEecCCcCeEE
Q psy952 80 --ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKT-LKTAIQDPRGITLHPGIGYVYFSSWNLQAYIG 156 (573)
Q Consensus 80 --~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~-l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~ 156 (573)
...+......+..|++.+.++.|+.+. ..+.|.+.++....... +......+..|+++|...+|+... ....|.
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~ 208 (337)
T 1gxr_A 132 RIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG--LDNTVR 208 (337)
T ss_dssp EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEE
T ss_pred ceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe--cCCcEE
Confidence 222333335678888887655555554 56789999987654333 333455688999999766666655 356788
Q ss_pred EEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEe
Q psy952 157 KIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWT 235 (573)
Q Consensus 157 r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywt 235 (573)
..++......... ..-..+..+++.+.+..|+.+. ..+.|...++.......+... ...+..+++. ++.++++
T Consensus 209 ~~d~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 209 SWDLREGRQLQQH---DFTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHLH--ESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp EEETTTTEEEEEE---ECSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECCC--SSCEEEEEECTTSSEEEE
T ss_pred EEECCCCceEeee---cCCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcCC--ccceeEEEECCCCCEEEE
Confidence 8887655433333 2233457889987777766654 467888889887665443322 3456777774 3445555
Q ss_pred cCCCCceEEEeccCCcce
Q psy952 236 DWNTKSINRADKFNGRDY 253 (573)
Q Consensus 236 d~~~~~I~~~~~~~g~~~ 253 (573)
-...+.|...+..+++..
T Consensus 283 ~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EETTSEEEEEETTTCCEE
T ss_pred ecCCCcEEEEECCCCeEE
Confidence 555677877776666544
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.46 E-value=1.1e-05 Score=82.45 Aligned_cols=196 Identities=11% Similarity=0.024 Sum_probs=120.0
Q ss_pred CEEEEEec----ccEEEEEcCCCceeecccCCcceE-EEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC-CCc
Q psy952 17 PWLIFSNK----YYVRNMSLDATQYSLVHQDLLNVV-AMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS-HGL 90 (573)
Q Consensus 17 ~~l~~s~~----~~I~~i~l~g~~~~~~~~~~~~~~-~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~-~~p 90 (573)
.+|+++.. ..|+.+++++.....+........ ++.|.+.++.|+++.... .|+++++++.....+..... ..|
T Consensus 48 ~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-~l~~~d~~~~~~~~~~~~~~~~~~ 126 (396)
T 3c5m_A 48 KKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL-NLMKVDLETLEEQVIYTVDEEWKG 126 (396)
T ss_dssp CEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT-EEEEEETTTCCEEEEEECCTTEEE
T ss_pred CEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC-cEEEEECCCCCcEEEEecccccCC
Confidence 35666643 268889998776555433333222 367888888898876543 79999998766554543221 112
Q ss_pred ce------------------eEEeecCCcEEEEe----CCCCeEEEEEcCCCceeEeccCCCCcceEEEeC-CCceEEEE
Q psy952 91 EG------------------LAVDWVGRKLYWLD----RHSKQLDVAELDGTNRKTLKTAIQDPRGITLHP-GIGYVYFS 147 (573)
Q Consensus 91 ~g------------------lavD~~~~~LY~td----~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp-~~g~LYwt 147 (573)
.| +++.+.++.|++.. .....|+++++.+...+.+.........+++.| ..+.|+++
T Consensus 127 ~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 127 YGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp EEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEE
Confidence 21 11222233343332 344578888988766655555555677889999 56656665
Q ss_pred ecCCc----CeEEEEeccCCCcEEEEecCCC-CCCCceEEEeccCCeEEEEeC--CCCe--EEEEeCCCCcEEEEEe
Q psy952 148 SWNLQ----AYIGKIGMDGSNFTRILTHEDD-IAWPNALTLDYFTERLYWADA--HLDY--IASVDLDGKHKHIVIS 215 (573)
Q Consensus 148 d~~~~----~~I~r~~ldG~~~~~l~~~~~~-l~~P~glaiD~~~~~LYw~D~--~~~~--I~~~~~dG~~~~~l~~ 215 (573)
..+.. ..|+.+++++...+.+. ... ...+..+++.+++.+|+++.. +... |+.+++.+...+.+..
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 207 HEGPHDLVDARMWLVNEDGSNVRKIK--EHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp ECSCSSSCSCCCEEEETTSCCCEESS--CCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred ecCCCCCCCceEEEEECCCCceeEee--ccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence 43322 57999999887665554 211 223556789888888877643 2334 9999998766655554
No 175
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.42 E-value=2.6e-05 Score=86.70 Aligned_cols=239 Identities=12% Similarity=0.115 Sum_probs=150.5
Q ss_pred ceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC-----CcceEE
Q psy952 8 TCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS-----TEKERV 82 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g-----~~~~~i 82 (573)
+..+.+ +..+|+++....|+.+++.+.....+......+..++|.+.++.|+++ ..+.|+.+++++ .....+
T Consensus 85 ~~~~~s-pd~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 85 FRTLDA-GRGLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp EEEEET-TTTEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEES
T ss_pred eeEEEC-CCCeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEe
Confidence 344433 337888888889999999877655444444456678899988888886 347899999876 544433
Q ss_pred EcCCCC--------------CcceeEEeecCCcEEEEeC--------------------------------CCCeEEEEE
Q psy952 83 IRHDSH--------------GLEGLAVDWVGRKLYWLDR--------------------------------HSKQLDVAE 116 (573)
Q Consensus 83 ~~~~~~--------------~p~glavD~~~~~LY~td~--------------------------------~~~~I~~~~ 116 (573)
...+.. .+.++++.+.++.|+++.. ....|.+.+
T Consensus 162 ~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 162 TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 322211 2578899888888888751 235788889
Q ss_pred cCCCceeEeccC---CCCcceEEEeCCCceEEEEecCC---cCeEEEEeccCC-CcEEEEec-CCC-CCCCceEEEec--
Q psy952 117 LDGTNRKTLKTA---IQDPRGITLHPGIGYVYFSSWNL---QAYIGKIGMDGS-NFTRILTH-EDD-IAWPNALTLDY-- 185 (573)
Q Consensus 117 ldg~~~~~l~~~---~~~P~~Iavdp~~g~LYwtd~~~---~~~I~r~~ldG~-~~~~l~~~-~~~-l~~P~glaiD~-- 185 (573)
+++...+.+... ...+..+++.|...+|+++.... ...|...++++. ..+.+... ... +.....+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~ 321 (706)
T 2z3z_A 242 LATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS 321 (706)
T ss_dssp TTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTC
T ss_pred CCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCC
Confidence 887665444422 23467899999888888865322 247888888765 44444310 111 11236788887
Q ss_pred cCCeEEEEeC-CCCeEEEEeCCCCcEEEEEeCCccceeEE-Eee--eCCeEEEecCCCC----ceEEEeccCCc
Q psy952 186 FTERLYWADA-HLDYIASVDLDGKHKHIVISGQKVPHVFA-LTL--FEDHIYWTDWNTK----SINRADKFNGR 251 (573)
Q Consensus 186 ~~~~LYw~D~-~~~~I~~~~~dG~~~~~l~~~~~~~~p~~-ia~--~~~~lywtd~~~~----~I~~~~~~~g~ 251 (573)
.+..||.++. +..+|+.++.+|...+.+..+. ....+ +++ ++..||++....+ .|++++..++.
T Consensus 322 dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 322 NNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE--WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSCEEEECCCSS--SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCEEEEEEccCCccEEEEEECCCCEEEecCCCC--eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 5555555543 2357888888887666554432 12223 444 4567888765543 78888765554
No 176
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.41 E-value=2.2e-05 Score=87.19 Aligned_cols=228 Identities=11% Similarity=0.044 Sum_probs=143.3
Q ss_pred CEEEEEecccEEEEEcCC-----CceeecccCCcc---------------eEEEEEEcCCCEEEEEEC------------
Q psy952 17 PWLIFSNKYYVRNMSLDA-----TQYSLVHQDLLN---------------VVAMDFHYKENRFYFADV------------ 64 (573)
Q Consensus 17 ~~l~~s~~~~I~~i~l~g-----~~~~~~~~~~~~---------------~~~v~~d~~~~~ly~~d~------------ 64 (573)
.+|+++....|+.+++.+ .....+...... +.+++|.+.+++|+++..
T Consensus 133 ~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~ 212 (706)
T 2z3z_A 133 DRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD 212 (706)
T ss_dssp SEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEE
T ss_pred CEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeec
Confidence 467777788999999976 544433222221 478899999999988752
Q ss_pred --------------------CCCeEEEEEcCCCcceEEEcC--CCCCcceeEEeecCCcEEEEeCCC----CeEEEEEcC
Q psy952 65 --------------------AAKTIYRSRVGSTEKERVIRH--DSHGLEGLAVDWVGRKLYWLDRHS----KQLDVAELD 118 (573)
Q Consensus 65 --------------------~~~~I~~~~~~g~~~~~i~~~--~~~~p~glavD~~~~~LY~td~~~----~~I~~~~ld 118 (573)
....|+.+++++.....+... .-..+..+++.+.++.|+++.... ..|.+.++.
T Consensus 213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~ 292 (706)
T 2z3z_A 213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE 292 (706)
T ss_dssp CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC
Confidence 235788888877654333221 113456788887778888864322 378888887
Q ss_pred CC-ceeEecc--CC---CCcceEEEeC--CCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCc-e-EEEeccCC
Q psy952 119 GT-NRKTLKT--AI---QDPRGITLHP--GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPN-A-LTLDYFTE 188 (573)
Q Consensus 119 g~-~~~~l~~--~~---~~P~~Iavdp--~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~-g-laiD~~~~ 188 (573)
+. ..+.+.. .. .....+++.| ...+||.++.....+|+.++++|...+.+. . -.++. . ++++++++
T Consensus 293 ~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~---~-~~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 293 TGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT---K-GEWEVTNFAGFDPKGT 368 (706)
T ss_dssp TCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC---C-SSSCEEEEEEECTTSS
T ss_pred CCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC---C-CCeEEEeeeEEcCCCC
Confidence 65 4444442 11 1236789998 776676665444568888887776554443 2 22332 3 78998899
Q ss_pred eEEEEeCCCC----eEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEEecC---CCCceEEEeccCCc
Q psy952 189 RLYWADAHLD----YIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTDW---NTKSINRADKFNGR 251 (573)
Q Consensus 189 ~LYw~D~~~~----~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lywtd~---~~~~I~~~~~~~g~ 251 (573)
+||++....+ .|+++++++...+.+... .....+++ ++.+|+++-. ....|+..+..+++
T Consensus 369 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 369 RLYFESTEASPLERHFYCIDIKGGKTKDLTPE---SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEESSSCTTCBEEEEEETTCCCCEESCCS---SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEecCCCCceEEEEEEEcCCCCceeccCC---CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 9999876654 899999887665544432 23455565 3445555422 12457777765554
No 177
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.40 E-value=0.001 Score=68.23 Aligned_cols=228 Identities=10% Similarity=-0.030 Sum_probs=146.1
Q ss_pred CCEEEEEecccEEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCccee
Q psy952 16 KPWLIFSNKYYVRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGL 93 (573)
Q Consensus 16 ~~~l~~s~~~~I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gl 93 (573)
..++..+..+.|+..++.......... ....+..|+|.+.+..|+.+. ..+.|..+++........+......+..|
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 456666777889999997665543332 345688999998666666554 56788889987654433443333456666
Q ss_pred EEeecCCcEEEEeCCCCeEEEEEcCC-C-ceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec
Q psy952 94 AVDWVGRKLYWLDRHSKQLDVAELDG-T-NRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH 171 (573)
Q Consensus 94 avD~~~~~LY~td~~~~~I~~~~ldg-~-~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~ 171 (573)
+++ ++++++-...+.|.+.++.. . ....+........+|+++|...+|+... ....|...++........+
T Consensus 183 ~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~-- 255 (401)
T 4aez_A 183 SWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG--NDNVVQIWDARSSIPKFTK-- 255 (401)
T ss_dssp EEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTCSSEEEEE--
T ss_pred EEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe--CCCeEEEccCCCCCccEEe--
Confidence 663 45556666678999999873 2 2333444556689999999655555554 3467777777755444334
Q ss_pred CCCCCCCceEEEeccCCeEEEEeC--CCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEe-cCCCCceEEEe
Q psy952 172 EDDIAWPNALTLDYFTERLYWADA--HLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWT-DWNTKSINRAD 246 (573)
Q Consensus 172 ~~~l~~P~glaiD~~~~~LYw~D~--~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywt-d~~~~~I~~~~ 246 (573)
...-.....|++.+.+..|+.+-. ..+.|...++........+.. -.....+++. +..|+.+ ....+.|...+
T Consensus 256 ~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 256 TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEEE
T ss_pred cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEEe
Confidence 344455689999988888888755 578899999876554433332 2356777773 3445554 33566777666
Q ss_pred ccCCcce
Q psy952 247 KFNGRDY 253 (573)
Q Consensus 247 ~~~g~~~ 253 (573)
..++...
T Consensus 334 ~~~~~~~ 340 (401)
T 4aez_A 334 YSSSGLT 340 (401)
T ss_dssp EETTEEE
T ss_pred cCCccce
Confidence 5554433
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.39 E-value=1.3e-05 Score=88.31 Aligned_cols=200 Identities=10% Similarity=0.040 Sum_probs=127.7
Q ss_pred EEEEE--cCCCE-EEEEECCCCeEEEEEcC--C-CcceEEEcC----CCCCcceeEEeecCCcEEEEeCC---------C
Q psy952 49 AMDFH--YKENR-FYFADVAAKTIYRSRVG--S-TEKERVIRH----DSHGLEGLAVDWVGRKLYWLDRH---------S 109 (573)
Q Consensus 49 ~v~~d--~~~~~-ly~~d~~~~~I~~~~~~--g-~~~~~i~~~----~~~~p~glavD~~~~~LY~td~~---------~ 109 (573)
++.+. +.+++ |+++......|+.++++ | +....+... ....+.++++.+.++.|+++... .
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 44454 66788 88887767889999998 4 544444331 12456788999888889887632 1
Q ss_pred CeEEEEEcCC------CceeEec-cCCCCcceEEEeCCCceEEEEecCC------cCeEEEEeccC-C---CcEEEEecC
Q psy952 110 KQLDVAELDG------TNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNL------QAYIGKIGMDG-S---NFTRILTHE 172 (573)
Q Consensus 110 ~~I~~~~ldg------~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~------~~~I~r~~ldG-~---~~~~l~~~~ 172 (573)
..|++.++++ ...+.|. .+.....+++++|...+|+|+.+.. ...|+..++++ . ..+.+. .
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~--~ 238 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL--G 238 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE--E
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC--C
Confidence 4799999998 6666666 5445577889999988999887542 25799999984 2 333343 2
Q ss_pred CCCCCCceEEEeccCCeEEEEeCCCC--eEEEEeCCCCcEEEEEeCC-ccce------eEEEeee-CCeEEEecC-CCCc
Q psy952 173 DDIAWPNALTLDYFTERLYWADAHLD--YIASVDLDGKHKHIVISGQ-KVPH------VFALTLF-EDHIYWTDW-NTKS 241 (573)
Q Consensus 173 ~~l~~P~glaiD~~~~~LYw~D~~~~--~I~~~~~dG~~~~~l~~~~-~~~~------p~~ia~~-~~~lywtd~-~~~~ 241 (573)
..-..+..+++.+++. ||++....+ .|+++++++...+.+.... .... ...+++. +++++++-. ....
T Consensus 239 ~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAV 317 (662)
T ss_dssp ETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCE
T ss_pred CCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccE
Confidence 2234566788887666 666654444 8999998666555444321 1111 2345553 556655532 4456
Q ss_pred eEEEeccCCc
Q psy952 242 INRADKFNGR 251 (573)
Q Consensus 242 I~~~~~~~g~ 251 (573)
|++++..++.
T Consensus 318 l~~~d~~~~~ 327 (662)
T 3azo_A 318 LGILDPESGE 327 (662)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 7777754443
No 179
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.38 E-value=0.00033 Score=75.31 Aligned_cols=229 Identities=11% Similarity=0.075 Sum_probs=149.3
Q ss_pred EEEEE-ecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEe
Q psy952 18 WLIFS-NKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVD 96 (573)
Q Consensus 18 ~l~~s-~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD 96 (573)
+|+.+ ....|+..++++.....+......+.+++|.+....|... ...+.|...+.++.....+... -..+.+|++.
T Consensus 317 ~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~~~~~~~~~~~~-~~~v~~~~~s 394 (577)
T 2ymu_A 317 TIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGH-SSSVRGVAFS 394 (577)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTCCEEEEEECC-SSCEEEEEEC
T ss_pred EEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEcCCCCEEEEecCC-CCCeEEEEEC
Confidence 44433 3457887888776655544445568899999876666554 4566788888877655544433 3578899998
Q ss_pred ecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCC
Q psy952 97 WVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIA 176 (573)
Q Consensus 97 ~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~ 176 (573)
+.++.|..+. ..+.|.+.+.++....++...-....+|++.|...+|..+. ....|...++++.....+. ..-.
T Consensus 395 ~dg~~l~~~~-~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d~~v~~w~~~~~~~~~~~---~~~~ 468 (577)
T 2ymu_A 395 PDGQTIASAS-DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASAS--DDKTVKLWNRNGQLLQTLT---GHSS 468 (577)
T ss_dssp TTSSCEEEEE-TTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTSCEEEEEE---CCSS
T ss_pred CCCCEEEEEe-CCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEc--CCCEEEEEECCCCEEEEEc---CCCC
Confidence 8666665554 46789999988877766665556678999999777666554 3566777778876665555 2333
Q ss_pred CCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEE
Q psy952 177 WPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRV 255 (573)
Q Consensus 177 ~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~ 255 (573)
....|++.+.+..|..+ ...+.|...+.+|...+.+... ......|++. ++.+..+-...+.|..-+ .+|+...+
T Consensus 469 ~v~~~~~spd~~~las~-~~d~~i~iw~~~~~~~~~~~~h--~~~v~~l~~s~dg~~l~s~~~dg~v~lwd-~~~~~~~~ 544 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGH--SSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQT 544 (577)
T ss_dssp CEEEEEECTTSCEEEEE-ETTSEEEEEETTSCEEEEEECC--SSCEEEEEECTTSSCEEEEETTSEEEEEC-TTSCEEEE
T ss_pred CEEEEEEcCCCCEEEEE-eCCCEEEEEcCCCCEEEEEeCC--CCCEEEEEEcCCCCEEEEEECcCEEEEEe-CCCCEEEE
Confidence 45789998766655544 4567788888888766665432 2456778773 344444444456666555 56665555
Q ss_pred Ecc
Q psy952 256 LRN 258 (573)
Q Consensus 256 l~~ 258 (573)
+..
T Consensus 545 ~~~ 547 (577)
T 2ymu_A 545 LTG 547 (577)
T ss_dssp EEC
T ss_pred EcC
Confidence 543
No 180
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.0004 Score=72.56 Aligned_cols=195 Identities=10% Similarity=-0.010 Sum_probs=121.9
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcC--CCcceEEEc--CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVG--STEKERVIR--HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN 121 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~i~~--~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~ 121 (573)
.+.+|+|.+.+..|+++-...+.|..+++. +......+. ..-..+..|++.+.++.|+.++. .+.|.+.++....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCcc
Confidence 478999999888888887777888888887 443333332 12256789999987777877764 6789999876543
Q ss_pred ee-----EeccCCCCcceEEEeCC---CceEEEEecCCcCeEEEEeccCCC-cEEEEecCCCCCCCceEEEeccCCeEEE
Q psy952 122 RK-----TLKTAIQDPRGITLHPG---IGYVYFSSWNLQAYIGKIGMDGSN-FTRILTHEDDIAWPNALTLDYFTERLYW 192 (573)
Q Consensus 122 ~~-----~l~~~~~~P~~Iavdp~---~g~LYwtd~~~~~~I~r~~ldG~~-~~~l~~~~~~l~~P~glaiD~~~~~LYw 192 (573)
.. .+......+..|+++|. ..+|+.+.. ...|...++.... ...+. ...-.....|++. .+..|+.
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~--~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--DEHIKISHYPQCFIVDKWL--FGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--TSCEEEEEESCTTCEEEEC--CCCSSCEEEEEEC-STTEEEE
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--CCcEEEEECCCCceeeeee--cCCCCceEEEEEC-CCCEEEE
Confidence 32 22234456889999996 445655553 4566666665433 33323 2333456788888 5555555
Q ss_pred EeCCCCeEEEEeCCCCcE-EEEEeC-----------------------CccceeEEEeee--CCeEEEecCCCCceEEEe
Q psy952 193 ADAHLDYIASVDLDGKHK-HIVISG-----------------------QKVPHVFALTLF--EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 193 ~D~~~~~I~~~~~dG~~~-~~l~~~-----------------------~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~ 246 (573)
+ ...+.|...++..... ..+... ..-....+|++. +..||.+-...+.|...+
T Consensus 258 ~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 258 A-GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp E-ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred E-eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 4 4677888888875543 333211 001123456653 556777765667776665
Q ss_pred c
Q psy952 247 K 247 (573)
Q Consensus 247 ~ 247 (573)
.
T Consensus 337 ~ 337 (450)
T 2vdu_B 337 M 337 (450)
T ss_dssp E
T ss_pred e
Confidence 4
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.34 E-value=6.1e-05 Score=76.70 Aligned_cols=201 Identities=8% Similarity=0.021 Sum_probs=124.5
Q ss_pred EEEEcCCCEEEEEECCCC--eEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc
Q psy952 50 MDFHYKENRFYFADVAAK--TIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT 127 (573)
Q Consensus 50 v~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~ 127 (573)
++|.+.+++|+++....+ .|+.++++++....+.........++++.+.++.|+++... ..|.+.++.+...+.+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeeee
Confidence 568888888887765333 69999998776655443322223367888888899998853 589999998776555543
Q ss_pred CCCC---cceEEEeCCCceEEEEe--------------------cCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEe
Q psy952 128 AIQD---PRGITLHPGIGYVYFSS--------------------WNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLD 184 (573)
Q Consensus 128 ~~~~---P~~Iavdp~~g~LYwtd--------------------~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD 184 (573)
.-.. ....++++...+|+... ......|++.++++...+.+. ..-.....+++.
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~---~~~~~~~~~~~s 196 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL---QENQWLGHPIYR 196 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee---cCCccccccEEC
Confidence 2111 12233466555554321 112367999998877666665 222345788999
Q ss_pred c-cCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEE-ecCCCC---ceEEEeccCCcc
Q psy952 185 Y-FTERLYWADAH-----LDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYW-TDWNTK---SINRADKFNGRD 252 (573)
Q Consensus 185 ~-~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lyw-td~~~~---~I~~~~~~~g~~ 252 (573)
+ ++.+|+++... ...|+.++++|...+.+...........+++ ++..|++ ++.... .|+..+..+|+.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 8 78888666543 4489999999887766654320012334454 4555755 443222 388888766654
Q ss_pred eE
Q psy952 253 YR 254 (573)
Q Consensus 253 ~~ 254 (573)
+.
T Consensus 277 ~~ 278 (388)
T 3pe7_A 277 RQ 278 (388)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 182
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.34 E-value=0.00011 Score=82.13 Aligned_cols=233 Identities=10% Similarity=0.046 Sum_probs=145.1
Q ss_pred CCEEEEEecccEEEEEcCCC---ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCC----
Q psy952 16 KPWLIFSNKYYVRNMSLDAT---QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSH---- 88 (573)
Q Consensus 16 ~~~l~~s~~~~I~~i~l~g~---~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~---- 88 (573)
..+|+++....|+.+++.+. ....+......+..++|.+.+++|+++.. +.|+.++++++....+...+..
T Consensus 120 g~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 120 AQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp SSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred CCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEEeccCCccceec
Confidence 35788887789999999876 55444444456889999999998888763 4899999987654433322211
Q ss_pred ------------CcceeEEeecCCcEEEEeCCC--------------------------------CeEEEEEcCC-Ccee
Q psy952 89 ------------GLEGLAVDWVGRKLYWLDRHS--------------------------------KQLDVAELDG-TNRK 123 (573)
Q Consensus 89 ------------~p~glavD~~~~~LY~td~~~--------------------------------~~I~~~~ldg-~~~~ 123 (573)
.+.++++.+.++.|+++.... ..|.+.++++ ....
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 277 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ 277 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE
Confidence 257889988888898874321 1677788876 5544
Q ss_pred Eecc---CCCCcceEEEeCCCceEEEEecC---CcCeEEEEeccCCCcEEEEecCCC--CCCCceEEEeccCCeEEEEeC
Q psy952 124 TLKT---AIQDPRGITLHPGIGYVYFSSWN---LQAYIGKIGMDGSNFTRILTHEDD--IAWPNALTLDYFTERLYWADA 195 (573)
Q Consensus 124 ~l~~---~~~~P~~Iavdp~~g~LYwtd~~---~~~~I~r~~ldG~~~~~l~~~~~~--l~~P~glaiD~~~~~LYw~D~ 195 (573)
.+.. ....+..+++ |...+|+++... ....|+..++.+...+.+...... +.....+++.+++. ++++..
T Consensus 278 ~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~ 355 (741)
T 2ecf_A 278 WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSE 355 (741)
T ss_dssp EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEEC
T ss_pred EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEec
Confidence 4432 2234678999 988888877531 245788888876665555421111 11235788887666 555544
Q ss_pred CC--CeEEEEeCCCCcEEEEEeCCccceeEEE---eeeCCeEEEecCCC----CceEEEeccCCcceEEE
Q psy952 196 HL--DYIASVDLDGKHKHIVISGQKVPHVFAL---TLFEDHIYWTDWNT----KSINRADKFNGRDYRVL 256 (573)
Q Consensus 196 ~~--~~I~~~~~dG~~~~~l~~~~~~~~p~~i---a~~~~~lywtd~~~----~~I~~~~~~~g~~~~~l 256 (573)
.. .+|+.++.+|. .+.+..+. .....+ .-+++.||++-... ..|++++ .+|...+.|
T Consensus 356 ~~g~~~l~~~~~~~~-~~~l~~~~--~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-~~g~~~~~l 421 (741)
T 2ecf_A 356 RTGFQHLYRIDSKGK-AAALTHGN--WSVDELLAVDEKAGLAYFRAGIESARESQIYAVP-LQGGQPQRL 421 (741)
T ss_dssp TTSSCEEEEECSSSC-EEESCCSS--SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE-TTCCCCEEC
T ss_pred CCCccEEEEEcCCCC-eeeeeecc--eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE-cCCCCeeec
Confidence 43 47888888887 54444332 223333 33456787764432 3466665 334433333
No 183
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.34 E-value=0.00073 Score=66.59 Aligned_cols=217 Identities=9% Similarity=0.007 Sum_probs=136.6
Q ss_pred CEEEEEe-cccEEEEEcCCCce--e-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcce
Q psy952 17 PWLIFSN-KYYVRNMSLDATQY--S-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEG 92 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~--~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~g 92 (573)
.+|+.+. ...|+.+++..... . .+......+..++|.+..+.|+... ..+.|+.+++........+......+..
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~~~i~~ 188 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASC 188 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeeeeecccCceEE
Confidence 4555544 46788888876542 1 2223344578999998666666654 5567999998765444444433457888
Q ss_pred eEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecC
Q psy952 93 LAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE 172 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~ 172 (573)
|++.+.++.|+.+ ...+.|.+.++..............+..++++|...+|+... ....|...++.......+.
T Consensus 189 ~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~~i~~~~~~~~~~~~~~--- 262 (337)
T 1gxr_A 189 IDISNDGTKLWTG-GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGM--ESSNVEVLHVNKPDKYQLH--- 262 (337)
T ss_dssp EEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTSSCEEEEC---
T ss_pred EEECCCCCEEEEE-ecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEc--CCCcEEEEECCCCCeEEEc---
Confidence 9998765555554 457889999987665444444445688999999777777665 3567888888766554433
Q ss_pred CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceE
Q psy952 173 DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSIN 243 (573)
Q Consensus 173 ~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~ 243 (573)
..-..+..+++.+.+..|+.+ ...+.|...++........... ...+.++++. ++.++++-...+.|.
T Consensus 263 ~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~ 331 (337)
T 1gxr_A 263 LHESCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISVDDKYIVTGSGDKKAT 331 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred CCccceeEEEECCCCCEEEEe-cCCCcEEEEECCCCeEEEEecC--CCcEEEEEECCCCCEEEEecCCCeEE
Confidence 334456789998766665554 4577888888876555433332 2356677764 233333332344443
No 184
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.32 E-value=0.00059 Score=73.37 Aligned_cols=229 Identities=11% Similarity=0.061 Sum_probs=147.7
Q ss_pred EEEEE-ecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEe
Q psy952 18 WLIFS-NKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVD 96 (573)
Q Consensus 18 ~l~~s-~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD 96 (573)
+|+.+ ....|+..+.++.....+......+.+++|.+....|+. -...+.|...++++.....+.. ....+.++++.
T Consensus 276 ~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t-~~~d~~i~~w~~~~~~~~~~~~-~~~~v~~~~~s 353 (577)
T 2ymu_A 276 TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIAS-ASDDKTVKLWNRNGQHLQTLTG-HSSSVWGVAFS 353 (577)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTSCEEEEECC-CSSCEEEEEEC
T ss_pred EEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEE-EeCCCeEEEEeCCCCeeEEEeC-CCCCEEEEEEC
Confidence 34433 345677777776654444444456889999986665554 4456788888888765554432 23567889998
Q ss_pred ecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCC
Q psy952 97 WVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIA 176 (573)
Q Consensus 97 ~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~ 176 (573)
+.++.|.... ..+.|.+.+.++.....+......+++|+++|...+|.... ....|...+..+.....+. ..-.
T Consensus 354 ~~g~~l~~~~-~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~d~~v~~~~~~~~~~~~~~---~~~~ 427 (577)
T 2ymu_A 354 PDGQTIASAS-DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS--DDKTVKLWNRNGQLLQTLT---GHSS 427 (577)
T ss_dssp TTSSEEEEEE-TTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSEEEEECTTCCEEEEEE---CCSS
T ss_pred CCCCEEEEEe-CCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEe--CCCEEEEEeCCCCEEEEec---CCCC
Confidence 7666655544 56789889988877766665556689999999776666554 3456777777776655554 2223
Q ss_pred CCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEE
Q psy952 177 WPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRV 255 (573)
Q Consensus 177 ~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~ 255 (573)
...+|++.+.+..|..+ ...+.|...+.++.....+... .....+|++. ++.++.+-...+.|..-+ .+|+....
T Consensus 428 ~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~~~~~~~~~--~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~ 503 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQLLQTLTGH--SSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQT 503 (577)
T ss_dssp CEEEEEECTTSSEEEEE-ETTSEEEEEETTSCEEEEEECC--SSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEE
T ss_pred CeEEEEECCCCCEEEEE-cCCCEEEEEECCCCEEEEEcCC--CCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEE
Confidence 34688998766666554 3567788888888766655432 2356677774 445555544556666555 46665555
Q ss_pred Ecc
Q psy952 256 LRN 258 (573)
Q Consensus 256 l~~ 258 (573)
+..
T Consensus 504 ~~~ 506 (577)
T 2ymu_A 504 LTG 506 (577)
T ss_dssp EEC
T ss_pred EeC
Confidence 543
No 185
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.30 E-value=0.0007 Score=69.35 Aligned_cols=225 Identities=9% Similarity=-0.026 Sum_probs=139.7
Q ss_pred cccEEEEEcCCCc-----eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC-------cceEEEcCCCCCcc
Q psy952 24 KYYVRNMSLDATQ-----YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST-------EKERVIRHDSHGLE 91 (573)
Q Consensus 24 ~~~I~~i~l~g~~-----~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~-------~~~~i~~~~~~~p~ 91 (573)
.+.|+.++++... ...+......+.+|+|.+.++.++++-...+.|..+++... .....+......+.
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~ 135 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG 135 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence 5688888885431 11222234558899999845555556566788998888754 22223333346788
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eEe--ccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEE
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KTL--KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRI 168 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l--~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l 168 (573)
.|++.+.+.+++++-...+.|.+.++..... ..+ .........|+++|...+|+.+. ....|...++........
T Consensus 136 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 136 IVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC--RDKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp EEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE--TTSEEEEEETTTTEEEEE
T ss_pred EEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe--cCCcEEEEeCCCCceeee
Confidence 8999887767777776778999999875543 334 23445578999999666666655 356788777764432222
Q ss_pred EecCCCCCCCceEEEeccCCeEEEEe---CCCCeEEEEeCCCCcE--EEEEeCCccceeEEEeee--CCeEEEecCCCCc
Q psy952 169 LTHEDDIAWPNALTLDYFTERLYWAD---AHLDYIASVDLDGKHK--HIVISGQKVPHVFALTLF--EDHIYWTDWNTKS 241 (573)
Q Consensus 169 ~~~~~~l~~P~glaiD~~~~~LYw~D---~~~~~I~~~~~dG~~~--~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~ 241 (573)
+.....-..+..+++.+. ++++.+- ...+.|...++..... ....... ......+++. +..||++-...+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~g~~dg~ 291 (402)
T 2aq5_A 214 KDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT-SSGVLLPFFDPDTNIVYLCGKGDSS 291 (402)
T ss_dssp EECSSCSSSCCEEEECST-TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC-CSSCEEEEEETTTTEEEEEETTCSC
T ss_pred eccCCCCCcceEEEEcCC-CcEEEEeccCCCCceEEEEcCccccCCceEEeccC-CCceeEEEEcCCCCEEEEEEcCCCe
Confidence 200122223678888865 4554444 4667888888875432 2222121 2346667764 5578888767778
Q ss_pred eEEEeccCCcc
Q psy952 242 INRADKFNGRD 252 (573)
Q Consensus 242 I~~~~~~~g~~ 252 (573)
|...+..+++.
T Consensus 292 i~i~d~~~~~~ 302 (402)
T 2aq5_A 292 IRYFEITSEAP 302 (402)
T ss_dssp EEEEEECSSTT
T ss_pred EEEEEecCCCc
Confidence 88777666653
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.29 E-value=0.00058 Score=76.02 Aligned_cols=226 Identities=9% Similarity=0.054 Sum_probs=140.0
Q ss_pred cEEEEEcCCCceeeccc------CC-cceEEEEEEcCCCEEEEEECCCC----eEEEEEcCCCcceEEEcCCCCCcceeE
Q psy952 26 YVRNMSLDATQYSLVHQ------DL-LNVVAMDFHYKENRFYFADVAAK----TIYRSRVGSTEKERVIRHDSHGLEGLA 94 (573)
Q Consensus 26 ~I~~i~l~g~~~~~~~~------~~-~~~~~v~~d~~~~~ly~~d~~~~----~I~~~~~~g~~~~~i~~~~~~~p~gla 94 (573)
.|+++++.+...++++. .. ....+++|.+.+++|.++-...+ .|+.++++++....+.... ....+++
T Consensus 99 ~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~ 177 (710)
T 2xdw_A 99 VLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMA 177 (710)
T ss_dssp EEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEE
T ss_pred EEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEE
Confidence 67888876655443321 11 13678999998888877644332 7999999876554332222 1355677
Q ss_pred EeecCCcEEEEeCCC---------------CeEEEEEcCCCcee--EeccCCC---CcceEEEeCCCceEEEEecCC---
Q psy952 95 VDWVGRKLYWLDRHS---------------KQLDVAELDGTNRK--TLKTAIQ---DPRGITLHPGIGYVYFSSWNL--- 151 (573)
Q Consensus 95 vD~~~~~LY~td~~~---------------~~I~~~~ldg~~~~--~l~~~~~---~P~~Iavdp~~g~LYwtd~~~--- 151 (573)
+.+.++.||++.... ..|++.++.+.... .+..... ...+++++|..++|+++....
T Consensus 178 wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 257 (710)
T 2xdw_A 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDP 257 (710)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSS
T ss_pred EEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCC
Confidence 777778888876432 34899998765432 3333322 246899999988988876422
Q ss_pred cCeEEEEeccC------C--CcEEEEecCCCCCCCceEEEeccCCeEEEEeCC---CCeEEEEeCCCCc---EEEEEeCC
Q psy952 152 QAYIGKIGMDG------S--NFTRILTHEDDIAWPNALTLDYFTERLYWADAH---LDYIASVDLDGKH---KHIVISGQ 217 (573)
Q Consensus 152 ~~~I~r~~ldG------~--~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~---~~~I~~~~~dG~~---~~~l~~~~ 217 (573)
...|+..++++ . ..+.|. .... .....+++.+++||+.... ..+|+.+++++.. .+.|+...
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~---~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLI---DNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEE---CSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred ccEEEEEECcccccccCCccceEEee---CCCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 46899999875 3 344454 2111 1223466778999987543 3479999998764 24555432
Q ss_pred ccceeEEEeee-CCeEEEecCCCC--ceEEEeccCCcceEEE
Q psy952 218 KVPHVFALTLF-EDHIYWTDWNTK--SINRADKFNGRDYRVL 256 (573)
Q Consensus 218 ~~~~p~~ia~~-~~~lywtd~~~~--~I~~~~~~~g~~~~~l 256 (573)
......++++. +++|+++-...+ +|++++..+|+..+.|
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF 375 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec
Confidence 11245677776 788887754433 5777775566644444
No 187
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.27 E-value=3.2e-07 Score=83.26 Aligned_cols=49 Identities=31% Similarity=0.621 Sum_probs=39.7
Q ss_pred CCCCCCCceecC--CCcccCCCcccCCCCCCCCCCCCCCCccCCc-CCCCCCc
Q psy952 408 RPCDKDTEFACR--NGHCIPKLWVCDFDNDCGDDSDEPAYMCRQR-NCTKGWE 457 (573)
Q Consensus 408 ~~C~~~~~f~C~--~g~ci~~~~~Cd~~~dC~d~sDE~~~~C~~~-~C~~~~~ 457 (573)
..|.+. +|+|. +|.|||..|+|||..||.|||||....|... +|.+.+|
T Consensus 51 ~~C~~~-eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF 102 (220)
T 2gtl_N 51 THCEKR-TFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVF 102 (220)
T ss_dssp CSSCTT-EEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEE
T ss_pred CCCCCC-ccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcce
Confidence 457777 99995 6899999999999999999999974448766 6765444
No 188
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.27 E-value=7.2e-05 Score=83.53 Aligned_cols=205 Identities=9% Similarity=0.071 Sum_probs=138.2
Q ss_pred cceEEEEEEcCCCEEEEEECCCC-----eEEEEEcCCCcceEEEcCCCC------------------------CcceeEE
Q psy952 45 LNVVAMDFHYKENRFYFADVAAK-----TIYRSRVGSTEKERVIRHDSH------------------------GLEGLAV 95 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~-----~I~~~~~~g~~~~~i~~~~~~------------------------~p~glav 95 (573)
..+..++|.+.+++|+++....+ .|+.++++++....++..... .+..+++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 45789999999999999887444 899999987766555533211 2578899
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCC---ceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecC
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGT---NRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE 172 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~---~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~ 172 (573)
.+.++.|+++.. +.|.+.++++. ..+.+......+..++++|...+|+++. ...|+..++++.....+. .
T Consensus 117 SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~---~~~i~~~d~~~g~~~~~~--~ 189 (741)
T 2ecf_A 117 SPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR---GRNLWVIDLASGRQMQLT--A 189 (741)
T ss_dssp CTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE---TTEEEEEETTTTEEEECC--C
T ss_pred CCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe---CCcEEEEecCCCCEEEec--c
Confidence 998888998875 78999999887 5555555555688999999888888876 247999998876544433 1
Q ss_pred CCC----------------CCCceEEEeccCCeEEEEeCCCC--------------------------------eEEEEe
Q psy952 173 DDI----------------AWPNALTLDYFTERLYWADAHLD--------------------------------YIASVD 204 (573)
Q Consensus 173 ~~l----------------~~P~glaiD~~~~~LYw~D~~~~--------------------------------~I~~~~ 204 (573)
... ..+.++++.+++.+|+++..... .|+.++
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 111 12578999999999988743221 677778
Q ss_pred CCC-CcEEEEEeC-CccceeEEEee-eCCeEEEecC----CCCceEEEeccCCcceEEE
Q psy952 205 LDG-KHKHIVISG-QKVPHVFALTL-FEDHIYWTDW----NTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 205 ~dG-~~~~~l~~~-~~~~~p~~ia~-~~~~lywtd~----~~~~I~~~~~~~g~~~~~l 256 (573)
+++ ...+.+... .....+..+++ ++.+|+++.. ....|+..+..+|+...++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred CCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 776 555444322 11123344444 5566776533 2346777777777655544
No 189
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.0013 Score=67.17 Aligned_cols=235 Identities=8% Similarity=-0.079 Sum_probs=142.5
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
.+|.+......+|+.+. ...|+..+..+.....+......+.+|+|.+....|+.+. ..+.|..+++........+..
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTEEEEEECC
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEEeec
Confidence 34554443344666554 4578888866665555444456688999998777777665 456788888865443333322
Q ss_pred CCCC---------------cceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee-EeccCCCCcceEEEeCCCceEEEEec
Q psy952 86 DSHG---------------LEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK-TLKTAIQDPRGITLHPGIGYVYFSSW 149 (573)
Q Consensus 86 ~~~~---------------p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~-~l~~~~~~P~~Iavdp~~g~LYwtd~ 149 (573)
.... +..+++.. +..+++-...+.|.+.++...... .+.........|+++|...+|+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~- 266 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVD--DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS- 266 (425)
T ss_dssp C---------------CCCBSCCEEEE--TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE-
T ss_pred cccCccceeeccccCCcceeeEEEEcC--CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc-
Confidence 2122 66777764 344566666788999998765433 3334445578999999766666655
Q ss_pred CCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-
Q psy952 150 NLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF- 228 (573)
Q Consensus 150 ~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~- 228 (573)
....|...++........+ ...-.....+++.+.+ ++++-...+.|...++............ ...+..+++.
T Consensus 267 -~d~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~s~ 340 (425)
T 1r5m_A 267 -DDGTLRIWHGGNGNSQNCF--YGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVD-GVPIFAGRISQ 340 (425)
T ss_dssp -TTSCEEEECSSSBSCSEEE--CCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECT-TCCEEEEEECT
T ss_pred -CCCEEEEEECCCCccceEe--cCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccC-CccEEEEEEcC
Confidence 3556777776644333333 2333445788888655 5555556788999998755544334332 2456677774
Q ss_pred CCeEEEecCCCCceEEEeccCCc
Q psy952 229 EDHIYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 229 ~~~lywtd~~~~~I~~~~~~~g~ 251 (573)
.+.++++-...+.|...+..++.
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHH
T ss_pred CCCEEEEEECCCeEEEEECCCCc
Confidence 34455554456677766655444
No 190
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.21 E-value=0.0049 Score=61.10 Aligned_cols=227 Identities=15% Similarity=0.111 Sum_probs=139.8
Q ss_pred cccEEEEEcCCCceee--ccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCC
Q psy952 24 KYYVRNMSLDATQYSL--VHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGR 100 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~--~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~ 100 (573)
...|+..++....... .+. ....+.++++.+.. .+..+-...+.|+..++........+......+..+++.+.++
T Consensus 57 D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~ 135 (321)
T 3ow8_A 57 DDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ 135 (321)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSS
T ss_pred CCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCC
Confidence 4667777765543322 122 23457889998654 4555666677899999876544333433445677889987655
Q ss_pred cEEEEeCCCCeEEEEEcCCCceeE-eccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCc
Q psy952 101 KLYWLDRHSKQLDVAELDGTNRKT-LKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPN 179 (573)
Q Consensus 101 ~LY~td~~~~~I~~~~ldg~~~~~-l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~ 179 (573)
.| ++-...+.|.+.++....... +.........|+++|...+|.... ....|...++........+ ...-....
T Consensus 136 ~l-~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~--~dg~i~iwd~~~~~~~~~~--~~h~~~v~ 210 (321)
T 3ow8_A 136 YL-ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA--IDGIINIFDIATGKLLHTL--EGHAMPIR 210 (321)
T ss_dssp EE-EEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEE--CCCSSCCC
T ss_pred EE-EEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc--CCCeEEEEECCCCcEEEEE--cccCCcee
Confidence 44 455567889999987554433 334445578999999766666554 3456777776544332223 23333457
Q ss_pred eEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 180 ALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 180 glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
.|++.+.+..|+ +-...+.|...++........+.+. ......|++. ++.++++-...+.|..-+..+++....+..
T Consensus 211 ~l~~spd~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 211 SLTFSPDSQLLV-TASDDGYIKIYDVQHANLAGTLSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp EEEECTTSCEEE-EECTTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEcCCCCEEE-EEcCCCeEEEEECCCcceeEEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC
Confidence 899997655554 4456678888888765554444432 3456778874 445556655667777777666665555543
No 191
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.21 E-value=0.00016 Score=71.78 Aligned_cols=219 Identities=16% Similarity=0.167 Sum_probs=128.3
Q ss_pred CCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEE
Q psy952 16 KPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAV 95 (573)
Q Consensus 16 ~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glav 95 (573)
...|+++... |++++.+|...............++++ ++.||+.. ..+.|++++.+|...... .........+++
T Consensus 70 ~g~l~v~t~~-l~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t-~~~~l~~~d~~g~~~~~~-~~~~~~~~~~~~ 144 (330)
T 3hxj_A 70 DGTIYFGSDK-VYAINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTS-MDGHLYAINTDGTEKWRF-KTKKAIYATPIV 144 (330)
T ss_dssp TTEECCSSCE-EEEECCCGGGGGGSCC-----CCEEEE--TTEEEEEC-TTSEEEEECTTSCEEEEE-ECSSCCCSCCEE
T ss_pred CCcEEEecCc-EEEECCCCcEEEEEECCCCcccCceEE--CCEEEEEe-cCCEEEEEcCCCCEEEEE-cCCCceeeeeEE
Confidence 4456666555 888876554321111111111223333 77887764 456799999884332222 222234556677
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCC
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDI 175 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l 175 (573)
|. .++||+.. ..+.|.+++.+|.....+.........+++|+ .+.||++. ..|.+.+.+|.....+. ...
T Consensus 145 ~~-~g~l~vgt-~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~-~g~l~v~t----~~l~~~d~~g~~~~~~~---~~~ 214 (330)
T 3hxj_A 145 SE-DGTIYVGS-NDNYLYAINPDGTEKWRFKTNDAITSAASIGK-DGTIYFGS----DKVYAINPDGTEKWNFY---AGY 214 (330)
T ss_dssp CT-TSCEEEEC-TTSEEEEECTTSCEEEEEECSSCCCSCCEECT-TCCEEEES----SSEEEECTTSCEEEEEC---CSS
T ss_pred cC-CCEEEEEc-CCCEEEEECCCCCEeEEEecCCCceeeeEEcC-CCEEEEEe----CEEEEECCCCcEEEEEc---cCC
Confidence 64 56787765 34689999988655433333333466788886 67888876 56888886665433222 233
Q ss_pred CCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceE
Q psy952 176 AWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYR 254 (573)
Q Consensus 176 ~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~ 254 (573)
....++++| .+++||++.. .+.|.+++.+|.....+.... ..+..+++. ++.||++.. .+.|+++++ +|+...
T Consensus 215 ~~~~~~~~~-~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~--~~~~~~~~~~~g~l~v~t~-~ggl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 215 WTVTRPAIS-EDGTIYVTSL-DGHLYAINPDGTEKWRFKTGK--RIESSPVIGNTDTIYFGSY-DGHLYAINP-DGTEKW 288 (330)
T ss_dssp CCCSCCEEC-TTSCEEEEET-TTEEEEECTTSCEEEEEECSS--CCCSCCEECTTSCEEEECT-TCEEEEECT-TSCEEE
T ss_pred cceeceEEC-CCCeEEEEcC-CCeEEEECCCCCEeEEeeCCC--CccccceEcCCCeEEEecC-CCCEEEECC-CCcEEE
Confidence 446788888 4568988864 467888888776655444322 223345555 677887754 457888885 665443
Q ss_pred E
Q psy952 255 V 255 (573)
Q Consensus 255 ~ 255 (573)
.
T Consensus 289 ~ 289 (330)
T 3hxj_A 289 N 289 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 192
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.19 E-value=2.6e-07 Score=84.75 Aligned_cols=40 Identities=43% Similarity=0.870 Sum_probs=33.5
Q ss_pred CCCCCCCceecCC--CcccCCCcccCCCCCCCCCCCCCCCccC
Q psy952 408 RPCDKDTEFACRN--GHCIPKLWVCDFDNDCGDDSDEPAYMCR 448 (573)
Q Consensus 408 ~~C~~~~~f~C~~--g~ci~~~~~Cd~~~dC~d~sDE~~~~C~ 448 (573)
..|.+. +|+|.+ |.|||..|+|||.+||.|||||....|.
T Consensus 52 ~~C~~~-~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~ 93 (217)
T 2gtl_M 52 HHCDEH-ESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 93 (217)
T ss_dssp CCCCTT-EEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHC
T ss_pred CCCCCC-ceecCCCCCcEechhhccCCCCCCCCCCccccCcCC
Confidence 457777 999975 9999999999999999999999632254
No 193
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.19 E-value=4.1e-05 Score=83.08 Aligned_cols=188 Identities=9% Similarity=0.029 Sum_probs=122.3
Q ss_pred EEEEEe--cccEEEEEcCCCceeecccCC-cceEEEEEEcCCCEEEEEEC--C--CCeEEEEEc--CCCcceEEEcCCCC
Q psy952 18 WLIFSN--KYYVRNMSLDATQYSLVHQDL-LNVVAMDFHYKENRFYFADV--A--AKTIYRSRV--GSTEKERVIRHDSH 88 (573)
Q Consensus 18 ~l~~s~--~~~I~~i~l~g~~~~~~~~~~-~~~~~v~~d~~~~~ly~~d~--~--~~~I~~~~~--~g~~~~~i~~~~~~ 88 (573)
.|+++. ...+....+++.....+.... ..+.+++|.+. +.||+++. . ...|+++++ +|... .+. ...
T Consensus 35 ~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~--~~~ 110 (582)
T 3o4h_A 35 KLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE--AVK 110 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT--TSC
T ss_pred eEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-ccc--CCC
Confidence 455543 334444556666554443333 35778888876 77888886 2 237888888 66554 222 223
Q ss_pred CcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecC--CcCeEEEEeccCCCcE
Q psy952 89 GLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWN--LQAYIGKIGMDGSNFT 166 (573)
Q Consensus 89 ~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~--~~~~I~r~~ldG~~~~ 166 (573)
....+++.+.++.++++....+.+.+.++++...+.+..... ..++++|...+|+++... ....|++.++++...+
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 344567777777777665555566677888776666654322 789999988888876532 2257999998877766
Q ss_pred EEEecCCCCCCCceEEEeccCCeEEEEeCCC-CeEEEEeCCCCcEEEEEe
Q psy952 167 RILTHEDDIAWPNALTLDYFTERLYWADAHL-DYIASVDLDGKHKHIVIS 215 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~-~~I~~~~~dG~~~~~l~~ 215 (573)
.|. ........+++.+++.+||.++... ..|+.+++++...+ ++.
T Consensus 189 ~l~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 189 VFD---SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEC---CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred Eee---cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 654 3333457899999899999555432 38999999988777 443
No 194
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.18 E-value=0.0045 Score=61.57 Aligned_cols=222 Identities=7% Similarity=-0.040 Sum_probs=133.1
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCceee-cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSL-VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR 84 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~-~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~ 84 (573)
.+|.+......+|+.+. ...|+..++....... +......+.+|+|.+.++.|+.+ ...+.|..+++........+.
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~ 113 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTG-SADYSIKLWDVSNGQCVATWK 113 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTTEEEEEETTTCCEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEEee
Confidence 34554443334566554 4678888887554433 33344568899999866666554 456789999987655443443
Q ss_pred CCCCCcceeEEeecCCcEEEEeCC----CCeEEEEEcCCCce------------eEecc--CCCCcceEEEeCCCceEEE
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRH----SKQLDVAELDGTNR------------KTLKT--AIQDPRGITLHPGIGYVYF 146 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~----~~~I~~~~ldg~~~------------~~l~~--~~~~P~~Iavdp~~g~LYw 146 (573)
.-..+..+++.+.+..|+.+... .+.|.+.++..... ..+.. .......++++|...+|+.
T Consensus 114 -~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 114 -SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp -CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE
T ss_pred -cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE
Confidence 33578889999877666665532 26788877654321 11111 2226788999996666666
Q ss_pred EecCCcCeEEEEeccCC-CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEE
Q psy952 147 SSWNLQAYIGKIGMDGS-NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFAL 225 (573)
Q Consensus 147 td~~~~~~I~r~~ldG~-~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~i 225 (573)
.. ..+.|...++... .....+ ...-.....|++.+.+..|+.+ ...+.|...++........... ......+
T Consensus 193 ~~--~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~--~~~~~~~ 265 (369)
T 3zwl_B 193 GH--KDGKISKYDVSNNYEYVDSI--DLHEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQVLKKYET--DCPLNTA 265 (369)
T ss_dssp EE--TTSEEEEEETTTTTEEEEEE--ECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEEC--SSCEEEE
T ss_pred Ec--CCCEEEEEECCCCcEeEEEE--ecCCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCceeeeecC--CCCceeE
Confidence 55 3567888887752 222222 2333455789998766666555 4567888888876554443332 2344555
Q ss_pred ee--eCCeEEEecC
Q psy952 226 TL--FEDHIYWTDW 237 (573)
Q Consensus 226 a~--~~~~lywtd~ 237 (573)
++ .+..|+.+..
T Consensus 266 ~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 266 VITPLKEFIILGGG 279 (369)
T ss_dssp EECSSSSEEEEEEC
T ss_pred EecCCCceEEEeec
Confidence 55 3444555443
No 195
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.17 E-value=0.0005 Score=69.31 Aligned_cols=221 Identities=8% Similarity=-0.043 Sum_probs=136.7
Q ss_pred CEEEEE-ecccEEEEEcCCCcee-e---cc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFS-NKYYVRNMSLDATQYS-L---VH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s-~~~~I~~i~l~g~~~~-~---~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
..|+.+ ....|+..++...+.. . .. .....+.+|+|.+.++.|+ +-...+.|...++........+......+
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~-sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAV-SGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 444444 3567888888654321 1 11 2234588999998655554 44566789999987654433343334678
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEec--cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC-CCcE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLK--TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG-SNFT 166 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~--~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG-~~~~ 166 (573)
..+++.+.+..++++-...+.|.+.++.... ...+. .....+..+++.|..+.++.+-. ....|...++.. ....
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~-~dg~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD-ENGTVSLVDTKSTSCVL 251 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE-TTSEEEEEESCC--CCE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec-cCCcEEEEECCCCcEEE
Confidence 8899988787888887778899999986443 33333 23334789999998887777642 356677777653 3333
Q ss_pred EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEecCCCCceEE
Q psy952 167 RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINR 244 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~ 244 (573)
.+. ..-.....|++.+.+.++..+-...+.|...++.......+ .+. .....+|++. +.+|+.+-...++|..
T Consensus 252 ~~~---~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 252 SSA---VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-QAH-RDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp EEE---CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-CCC-SSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEc---CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-cCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 443 23334578899877766666656677888888765543322 221 3346777763 4556666545555543
No 196
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.17 E-value=1.2e-06 Score=93.43 Aligned_cols=50 Identities=34% Similarity=0.806 Sum_probs=39.5
Q ss_pred CCCCCCcCCCceeeC-CCCceecCCcCcCCCCCCCCCCCCCCCCCCCC-----CCCCCCC
Q psy952 519 CPSNITCPPHHLKCA-NTNICVEPYWLCDGDNDCGDMSDEDPLHCQQR-----TCPQNSF 572 (573)
Q Consensus 519 C~~~~~C~~~~f~C~-~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~~-----~c~~~~f 572 (573)
|+....|. ++|+|. +| +|||..|+|||++||+|+|||. +|... .|...+|
T Consensus 60 c~~~~~c~-~~f~C~~~g-~Ci~~~~~Cdg~~dC~d~sDE~--~C~~~~~~~~~C~~~~~ 115 (554)
T 3ojy_A 60 CVRQAQCG-QDFQCKETG-RCLKRHLVCNGDQDCLDGSDED--DCEDVRAIDEDCSQYEP 115 (554)
T ss_dssp C--CCCCS-SSEECSSSC-CEECGGGTTSSSCCSSSCTTSS--SCCSCCCCCTTTTTSCB
T ss_pred CcccCCCC-CcCccCCCC-EEcccccccCCcccCCCccccc--cCCCCCCCccccccccc
Confidence 43334563 799999 88 9999999999999999999999 89753 4876554
No 197
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.17 E-value=0.0014 Score=66.44 Aligned_cols=195 Identities=11% Similarity=-0.003 Sum_probs=125.4
Q ss_pred CceeeCCCCC-CEEEEEe-cccEEEEEcCCCceeeccc---CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE
Q psy952 7 STCKRRDSIK-PWLIFSN-KYYVRNMSLDATQYSLVHQ---DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER 81 (573)
Q Consensus 7 ~~C~~~~~~~-~~l~~s~-~~~I~~i~l~g~~~~~~~~---~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 81 (573)
.+|.+..... .+|+.+. ...|+..++.......... ....+.+|+|.+.++.++++-...+.|..+++.+.....
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 155 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQV 155 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEE
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEE
Confidence 3455443222 3555544 4689999998655443322 345688999998666666666677899999998755444
Q ss_pred EEcCC--CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEe
Q psy952 82 VIRHD--SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIG 159 (573)
Q Consensus 82 i~~~~--~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ 159 (573)
+.... ...+..|++.+.++.|+.+ ...+.|.+.++.+.....+.........|+++|...+++++-. ....|...+
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd 233 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATG-DSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSS-VDATVKLWD 233 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEE-ETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEE-TTSEEEEEE
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEE-CCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEe-CCCEEEEEe
Confidence 43322 1457889998766655544 4568999999987776666666667899999997663555542 355677777
Q ss_pred ccC----CCcEEEEecCCCCCCCceEEEec-cCCeEEEEeCCCCeEEEEeCCC
Q psy952 160 MDG----SNFTRILTHEDDIAWPNALTLDY-FTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 160 ldG----~~~~~l~~~~~~l~~P~glaiD~-~~~~LYw~D~~~~~I~~~~~dG 207 (573)
+.. ....... ..-.....|++++ .+..|+.+ ...+.|...++..
T Consensus 234 ~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM---PHEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYD 282 (383)
T ss_dssp GGGCCSTTCEEEEE---ECSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTB
T ss_pred CCCCCcccceEEEe---cCCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCC
Confidence 653 1122222 2234557899998 55555544 4567888888764
No 198
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.16 E-value=0.00039 Score=68.85 Aligned_cols=209 Identities=13% Similarity=0.133 Sum_probs=126.3
Q ss_pred CEEEEEe-cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEE
Q psy952 17 PWLIFSN-KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAV 95 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glav 95 (573)
..|+++. ...|++++..|...-........+..+.++. ++.||+.. ..+.|++++.+|.....+. ........+++
T Consensus 108 ~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt-~~~~l~~~d~~g~~~~~~~-~~~~~~~~~~~ 184 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSE-DGTIYVGS-NDNYLYAINPDGTEKWRFK-TNDAITSAASI 184 (330)
T ss_dssp TEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECT-TSCEEEEC-TTSEEEEECTTSCEEEEEE-CSSCCCSCCEE
T ss_pred CEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcC-CCEEEEEc-CCCEEEEECCCCCEeEEEe-cCCCceeeeEE
Confidence 4455555 4678888887443211111222234455663 56677754 4468999998843332222 22345667788
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCC
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDI 175 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l 175 (573)
|. .++||++. +.|.+++.+|............+.++++++ .|.||+... ...|.+.+.+|.....+. ..-
T Consensus 185 d~-~g~l~v~t---~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~-~g~l~v~t~--~~gl~~~~~~g~~~~~~~---~~~ 254 (330)
T 3hxj_A 185 GK-DGTIYFGS---DKVYAINPDGTEKWNFYAGYWTVTRPAISE-DGTIYVTSL--DGHLYAINPDGTEKWRFK---TGK 254 (330)
T ss_dssp CT-TCCEEEES---SSEEEECTTSCEEEEECCSSCCCSCCEECT-TSCEEEEET--TTEEEEECTTSCEEEEEE---CSS
T ss_pred cC-CCEEEEEe---CEEEEECCCCcEEEEEccCCcceeceEECC-CCeEEEEcC--CCeEEEECCCCCEeEEee---CCC
Confidence 74 67788887 779988876665444443445578899998 578988873 457888877776554443 222
Q ss_pred CCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEee-eCCeEEEecCCCCceE
Q psy952 176 AWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTL-FEDHIYWTDWNTKSIN 243 (573)
Q Consensus 176 ~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~-~~~~lywtd~~~~~I~ 243 (573)
..+..+++| .+++||++.. .+.|.+++.+|.....+... -....++.+ .++.||+... .+.|.
T Consensus 255 ~~~~~~~~~-~~g~l~v~t~-~ggl~~~d~~g~~~~~~~~~--~~~~~~~~~d~~g~l~~gt~-~G~~~ 318 (330)
T 3hxj_A 255 RIESSPVIG-NTDTIYFGSY-DGHLYAINPDGTEKWNFETG--SWIIATPVIDENGTIYFGTR-NGKFY 318 (330)
T ss_dssp CCCSCCEEC-TTSCEEEECT-TCEEEEECTTSCEEEEEECS--SCCCSCCEECTTCCEEEECT-TSCEE
T ss_pred CccccceEc-CCCeEEEecC-CCCEEEECCCCcEEEEEEcC--CccccceEEcCCCEEEEEcC-CCeEE
Confidence 334567776 5778888764 45789998877655443322 123445555 4667777643 34443
No 199
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.15 E-value=0.00011 Score=79.70 Aligned_cols=206 Identities=10% Similarity=-0.014 Sum_probs=127.7
Q ss_pred cEEEEEc--CCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEE
Q psy952 26 YVRNMSL--DATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLY 103 (573)
Q Consensus 26 ~I~~i~l--~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY 103 (573)
.|+.+++ ++....+.. ......+++.+..+.++++....+.+..++++++..+.+.... . ..+++++.++.|+
T Consensus 91 ~l~~~~~~~~g~~~~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~--~-~~~~~spDG~~la 165 (582)
T 3o4h_A 91 ALFKVNTSRPGEEQRLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP--G-FGFVSDIRGDLIA 165 (582)
T ss_dssp EEEEEETTSTTCCEECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES--S-CEEEEEEETTEEE
T ss_pred EEEEEeccCCCccccccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC--C-ceEEECCCCCEEE
Confidence 6777888 666553322 2223344666666666666555445557788776655555432 2 7889999999998
Q ss_pred EEeCC---CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCce
Q psy952 104 WLDRH---SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNA 180 (573)
Q Consensus 104 ~td~~---~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~g 180 (573)
++... ...|++.++++...+.|.........+++.|...+||.++......|++.++++...+ ++ ...-..+.+
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~--~~~~~~~~~ 242 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL--ELPSKDFSS 242 (582)
T ss_dssp EEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC--CCSCSHHHH
T ss_pred EEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec--cCCCcChhh
Confidence 76432 2579999998777777765555578999999888888555333348999999987766 44 222223345
Q ss_pred EE--------EeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecC---CCCceEEEe
Q psy952 181 LT--------LDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDW---NTKSINRAD 246 (573)
Q Consensus 181 la--------iD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~---~~~~I~~~~ 246 (573)
++ +++++ +||++-...+++....+ |...+ .. .....++++.++.++++-. ....|+.++
T Consensus 243 ~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~~~~----~~-~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 243 YRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GERVE----AP-QGNHGRVVLWRGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp HCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TEEEC----CC-SSEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred hhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CCeec----cC-CCceEEEEecCCEEEEEEcCCCCCCeEEEEc
Confidence 55 88766 88877666677776677 53222 11 2244556655555555422 223455554
No 200
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00043 Score=70.82 Aligned_cols=230 Identities=7% Similarity=0.006 Sum_probs=141.7
Q ss_pred cccEEEEEcCCCce---eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC----CcceEEEcCCCCCcceeEEe
Q psy952 24 KYYVRNMSLDATQY---SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS----TEKERVIRHDSHGLEGLAVD 96 (573)
Q Consensus 24 ~~~I~~i~l~g~~~---~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~i~~~~~~~p~glavD 96 (573)
...|+..++..... .........+..|+|.+....|+.+. ..+.|..+++.. ......+......+..|++.
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 122 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL-DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFN 122 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE-SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred CCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc-cCCeEEEeecccccccccchhhccCCccceEEEEEc
Confidence 35688888875432 12223345688999998766665554 456788888875 11222233334577889998
Q ss_pred ecCCcEEEEeCCCCeEEEEEcCCCc------eeEec----cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE
Q psy952 97 WVGRKLYWLDRHSKQLDVAELDGTN------RKTLK----TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT 166 (573)
Q Consensus 97 ~~~~~LY~td~~~~~I~~~~ldg~~------~~~l~----~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~ 166 (573)
+.+++++++-...+.|.+.++.... ....+ ........|+++|..+.++++-. ....|...++......
T Consensus 123 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 123 AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-SSNFASIWDLKAKKEV 201 (416)
T ss_dssp SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-SSSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc-CCCCEEEEECCCCCcc
Confidence 7756677776677899999987654 22111 23445889999997566666642 3567888887655443
Q ss_pred EEEecCCC------CCCCceEEEeccCCeEEEEeCCCC---eEEEEeCCCC-cEEEEEe-CCccceeEEEeee--CCeEE
Q psy952 167 RILTHEDD------IAWPNALTLDYFTERLYWADAHLD---YIASVDLDGK-HKHIVIS-GQKVPHVFALTLF--EDHIY 233 (573)
Q Consensus 167 ~l~~~~~~------l~~P~glaiD~~~~~LYw~D~~~~---~I~~~~~dG~-~~~~l~~-~~~~~~p~~ia~~--~~~ly 233 (573)
..+ ... -.....|++.+.+..++++-...+ .|...++... ....... +. ......|++. ++.++
T Consensus 202 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l 278 (416)
T 2pm9_A 202 IHL--SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH-QKGILSLDWCHQDEHLL 278 (416)
T ss_dssp EEE--CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC-SSCEEEEEECSSCSSCE
T ss_pred eEE--eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc-cCceeEEEeCCCCCCeE
Confidence 333 222 344678999987766666555555 7888887653 2211222 21 3456778773 45666
Q ss_pred EecCCCCceEEEeccCCcceEEEcc
Q psy952 234 WTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 234 wtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
++-...+.|...+..+++....+..
T Consensus 279 ~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 279 LSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EEEESSSEEEEECSSSCCEEEEEEC
T ss_pred EEEeCCCCEEEeeCCCCccceeecC
Confidence 6655667787777667765555543
No 201
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.14 E-value=0.00028 Score=71.47 Aligned_cols=234 Identities=9% Similarity=-0.035 Sum_probs=136.4
Q ss_pred CceeeCCCCCCEEEEEecccEEEEEcCCCceee----cc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE
Q psy952 7 STCKRRDSIKPWLIFSNKYYVRNMSLDATQYSL----VH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER 81 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~----~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 81 (573)
.++.+......+|.-+....|+..++....... .. .....+..|+|.+....|.. -...+.|+..++.......
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s-gs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS-GGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEE-EETTSCEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEE-EeCCCeEEEEECCCCcEEE
Confidence 344443322334443445667776765432211 11 12345789999986665554 4456788888987654443
Q ss_pred EEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec---cCCCCcceEEEeCCCceEEEEecCCcCeEEEE
Q psy952 82 VIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK---TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKI 158 (573)
Q Consensus 82 i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~---~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~ 158 (573)
.+......+..|++.+.++.++++-...+.|.+.++........+ .....+..|++.|..+.++.+-. ....|...
T Consensus 176 ~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~-~d~~i~~w 254 (357)
T 4g56_B 176 SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD-ETGNVSLV 254 (357)
T ss_dssp EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE-SSSCEEEE
T ss_pred EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee-cccceeEE
Confidence 444444678889998777778888777888998887654332222 23334789999998777776642 34567777
Q ss_pred eccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee--CCeEEEec
Q psy952 159 GMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTD 236 (573)
Q Consensus 159 ~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~--~~~lywtd 236 (573)
++........+ ...-.....|++.+.++++..+-...+.|...+++......+. +. .....+|++. ++.++.|-
T Consensus 255 d~~~~~~~~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H-~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 255 NIKNPDSAQTS--AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SH-RDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp ESSCGGGCEEE--CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CC-SSCEEEEEECSSSTTEEEEE
T ss_pred ECCCCcEeEEE--eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CC-CCCEEEEEEeCCCCCEEEEE
Confidence 66543332223 2233344788988777666665556678888888755433222 21 2356788873 46666665
Q ss_pred CCCCceEEEe
Q psy952 237 WNTKSINRAD 246 (573)
Q Consensus 237 ~~~~~I~~~~ 246 (573)
...+.|..-+
T Consensus 331 s~Dg~v~iW~ 340 (357)
T 4g56_B 331 GWDHKVLHHH 340 (357)
T ss_dssp ETTSCEEEEE
T ss_pred cCCCeEEEEE
Confidence 5566666544
No 202
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.14 E-value=0.00043 Score=71.93 Aligned_cols=219 Identities=8% Similarity=0.050 Sum_probs=138.7
Q ss_pred cccEEEEEcCC-----------CceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-------eEEEcC
Q psy952 24 KYYVRNMSLDA-----------TQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-------ERVIRH 85 (573)
Q Consensus 24 ~~~I~~i~l~g-----------~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-------~~i~~~ 85 (573)
...|+.+++.. .....+......+.+|+|++....++++-...+.|..+++..... ...+..
T Consensus 150 dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 229 (430)
T 2xyi_A 150 SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG 229 (430)
T ss_dssp SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC
T ss_pred CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC
Confidence 45677777753 111122223345789999987775677777788899999875211 122222
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCC----ceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGT----NRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD 161 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~----~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld 161 (573)
....+..|++.+..++++++....+.|.+.++... ....+......++.|+++|...++|++-. ..+.|...++.
T Consensus 230 h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~-~dg~v~vwd~~ 308 (430)
T 2xyi_A 230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS-ADKTVALWDLR 308 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETT
T ss_pred CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEe-CCCeEEEEeCC
Confidence 33568889998878889999888899999998754 22233344456899999997777777753 35678888776
Q ss_pred CC--CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCc-------------EEEEEeCCccceeEEEe
Q psy952 162 GS--NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH-------------KHIVISGQKVPHVFALT 226 (573)
Q Consensus 162 G~--~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~-------------~~~l~~~~~~~~p~~ia 226 (573)
.. ....+. ..-.....|++.+.+..|+++-...+.|...++.... ..+.........+..++
T Consensus 309 ~~~~~~~~~~---~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 309 NLKLKLHSFE---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp CTTSCSEEEE---CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred CCCCCeEEee---cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 42 233333 3334567899998887888887777888777775411 11112111134577787
Q ss_pred eeC--CeEEEecCCCCceEEEe
Q psy952 227 LFE--DHIYWTDWNTKSINRAD 246 (573)
Q Consensus 227 ~~~--~~lywtd~~~~~I~~~~ 246 (573)
+.. .+++++-...+.|...+
T Consensus 386 ~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 386 WNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp ECSSSTTEEEEEETTSEEEEEE
T ss_pred ECCCCCCEEEEEECCCCEEEeE
Confidence 743 33666655666555443
No 203
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.13 E-value=0.0035 Score=70.31 Aligned_cols=248 Identities=10% Similarity=-0.003 Sum_probs=153.5
Q ss_pred CCceeeCCCCCCEEEEEe-cccEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE
Q psy952 6 ESTCKRRDSIKPWLIFSN-KYYVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI 83 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~ 83 (573)
..+|.+.....++|+.+. .+.|+..++..... ..+......+.+++|.+.++.|..+.. .+.|..+++........+
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-TSEEEEEETTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcEEEEE
Confidence 345555554556777765 45788888765433 333334456889999998777777654 678999998765543334
Q ss_pred cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCC-ce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc
Q psy952 84 RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGT-NR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD 161 (573)
Q Consensus 84 ~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~-~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld 161 (573)
......+..|++.+.+..|+.+. ..+.|.+.++... .. .++.........++++|..+.++++-. ....|...++.
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~v~vwd~~ 171 (814)
T 3mkq_A 94 EAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC-LDRTVKVWSLG 171 (814)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEETT
T ss_pred ecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe-CCCeEEEEECC
Confidence 43446788899988776666554 5678999998764 32 223344455789999995555555442 35678777776
Q ss_pred CCC-cEEEEecCCCCCCCceEEEecc-CCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCC
Q psy952 162 GSN-FTRILTHEDDIAWPNALTLDYF-TERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWN 238 (573)
Q Consensus 162 G~~-~~~l~~~~~~l~~P~glaiD~~-~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~ 238 (573)
... ...+. .........+++.+. ++.++++-...+.|...++..........+. ......+++. .+.++++-..
T Consensus 172 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 172 QSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH-MSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp CSSCSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC-SSCEEEEEECSSSSEEEEEET
T ss_pred CCcceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEEEeC
Confidence 443 33343 233345678888761 3444445456778888887755443333332 3445677764 3445555555
Q ss_pred CCceEEEeccCCcceEEEccc
Q psy952 239 TKSINRADKFNGRDYRVLRNT 259 (573)
Q Consensus 239 ~~~I~~~~~~~g~~~~~l~~~ 259 (573)
.+.|...+..++.....+...
T Consensus 249 dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 249 DGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp TSCEEEEETTTCSEEEEECCS
T ss_pred CCeEEEEECCCCcEEEEeecC
Confidence 677777776666655555443
No 204
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.0017 Score=66.17 Aligned_cols=244 Identities=7% Similarity=-0.050 Sum_probs=142.8
Q ss_pred CCCceeeCCCCCC-EEEEEec-ccEEEEEc----CCCc------ee-eccc----------CCcceEEEEEEcCCCEEEE
Q psy952 5 DESTCKRRDSIKP-WLIFSNK-YYVRNMSL----DATQ------YS-LVHQ----------DLLNVVAMDFHYKENRFYF 61 (573)
Q Consensus 5 dg~~C~~~~~~~~-~l~~s~~-~~I~~i~l----~g~~------~~-~~~~----------~~~~~~~v~~d~~~~~ly~ 61 (573)
+..+|.+...... +|+.+.. ..|+..++ .... .. .+.. ....+..|+|.+..+.|+.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 3455555543334 6666554 66888888 5443 11 1111 1236889999986666665
Q ss_pred EECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeE-eccCCCC---------
Q psy952 62 ADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKT-LKTAIQD--------- 131 (573)
Q Consensus 62 ~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~-l~~~~~~--------- 131 (573)
+. ..+.|..++.++.....+ ......+..|++.+.++.|+.+. ..+.|.+.++....... +......
T Consensus 126 ~~-~dg~i~i~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 126 GV-ENGELRLWNKTGALLNVL-NFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EE-TTSCEEEEETTSCEEEEE-CCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTEEEEEECCC------------
T ss_pred Ee-CCCeEEEEeCCCCeeeec-cCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 54 456788888666544433 33345788899987666666655 46789998986544332 2222122
Q ss_pred ------cceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeC
Q psy952 132 ------PRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDL 205 (573)
Q Consensus 132 ------P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~ 205 (573)
...+++.+. +.++... ....|...++........+ ...-.....|++.+.+..|+.+. ..+.|...++
T Consensus 203 ~~~~~~~~~~~~~~~-~~~~~~~--~~g~i~~~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~ 276 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDD-DKFVIPG--PKGAIFVYQITEKTPTGKL--IGHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHG 276 (425)
T ss_dssp ---CCCBSCCEEEET-TEEEEEC--GGGCEEEEETTCSSCSEEE--CCCSSCEEEEEEETTTTEEEEEE-TTSCEEEECS
T ss_pred cCCcceeeEEEEcCC-CEEEEEc--CCCeEEEEEcCCCceeeee--ccCCCceEEEEECCCCCEEEEEc-CCCEEEEEEC
Confidence 677888874 5554443 3567877777654433333 23333457889987666555554 5677888887
Q ss_pred CCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 206 DGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 206 dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
............ ......|++..+.++++-...+.|...+..+++....+..
T Consensus 277 ~~~~~~~~~~~~-~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 277 GNGNSQNCFYGH-SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp SSBSCSEEECCC-SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCccceEecCC-CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 654433333322 3456777775443666666677888887766665555443
No 205
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.10 E-value=2.1e-06 Score=91.65 Aligned_cols=46 Identities=46% Similarity=1.093 Sum_probs=37.6
Q ss_pred CCCCCCcCCCceeeC-CCCceecCCcCcCCCCCCCCCCCCCCCCCCC--CCCCC
Q psy952 519 CPSNITCPPHHLKCA-NTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ--RTCPQ 569 (573)
Q Consensus 519 C~~~~~C~~~~f~C~-~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~--~~c~~ 569 (573)
|+....| .+|+|. +| +||+..|+|||++||+|+|||. +|.. ..|..
T Consensus 62 C~~~~~c--~~f~C~~~g-~Ci~~~~~Cdg~~dC~d~sdE~--~c~~~~~~C~~ 110 (537)
T 3ojy_B 62 CRSQVRC--EGFVCAQTG-RCVNRRLLCNGDNDCGDQSDEA--NCRRIYKKCQH 110 (537)
T ss_dssp CCCCSCC--SSEECTTTC-CEECGGGTTSSSCCSSSSCTTS--SCSSCSSCCSS
T ss_pred cccCCCC--CccCcCCCC-cEeeccccCCCCCCCCCccccc--cCCCCCCcccc
Confidence 3333456 789999 88 9999999999999999999999 8864 45644
No 206
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.10 E-value=0.0033 Score=64.32 Aligned_cols=239 Identities=9% Similarity=0.034 Sum_probs=145.4
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC-cceEEEc
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST-EKERVIR 84 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~i~~ 84 (573)
++.+......+|+.+. ...|+.+++..... ..+......+..++|+ .+ ++++-...+.|..+++... .....+.
T Consensus 138 ~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 214 (401)
T 4aez_A 138 ASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQ 214 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEc
Confidence 3444433334565554 56788888875543 3333344557888886 33 5555556788999998743 3222333
Q ss_pred CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee-EeccCCCCcceEEEeCCCceEEEEecC-CcCeEEEEeccC
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK-TLKTAIQDPRGITLHPGIGYVYFSSWN-LQAYIGKIGMDG 162 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~-~l~~~~~~P~~Iavdp~~g~LYwtd~~-~~~~I~r~~ldG 162 (573)
.....+.+|++.+.+ .++++-...+.|.+.++...... .+.........|+++|....|+.+..+ ....|...++..
T Consensus 215 ~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 215 GHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred CCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 334678889998744 44455445678999998764433 343455668999999988888887632 366788888875
Q ss_pred CCcEEEEecCCCCCCCceEEEeccCCeEEEEeC-CCCeEEEEeCCCCcEEEEE--eCCccceeEEEeee-CCeEEEecCC
Q psy952 163 SNFTRILTHEDDIAWPNALTLDYFTERLYWADA-HLDYIASVDLDGKHKHIVI--SGQKVPHVFALTLF-EDHIYWTDWN 238 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~-~~~~I~~~~~dG~~~~~l~--~~~~~~~p~~ia~~-~~~lywtd~~ 238 (573)
......+ ..-.....+++.+.+..|+.+.. ..+.|...++.......+. .+. ......+++. ++.++++-..
T Consensus 294 ~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h-~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 294 GARVNTV---DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH-DTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp CCEEEEE---ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC-SSCCCEEEECTTSSEEEEECT
T ss_pred CCEEEEE---eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC-CCCEEEEEECCCCCEEEEEeC
Confidence 5444433 22234678999987777777643 5677888887654433332 222 3455677774 3445555556
Q ss_pred CCceEEEeccCCcceE
Q psy952 239 TKSINRADKFNGRDYR 254 (573)
Q Consensus 239 ~~~I~~~~~~~g~~~~ 254 (573)
.+.|...+..+++...
T Consensus 370 dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 370 DENLKFWRVYDGDHVK 385 (401)
T ss_dssp TSEEEEEECCC-----
T ss_pred CCcEEEEECCCCcccc
Confidence 6777777766665443
No 207
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.10 E-value=0.00052 Score=68.52 Aligned_cols=206 Identities=11% Similarity=0.058 Sum_probs=122.8
Q ss_pred cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECC----CCeEEEEEcCCCcceEEEcCCCCCcceeEEeecC
Q psy952 24 KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVA----AKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVG 99 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~----~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~ 99 (573)
...|+.+++++.....+ ..+..++|.+.+++|+++... ...|+.++++++....+.... . +.++++.+.+
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg 115 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDS 115 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTS
T ss_pred cceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCC
Confidence 34688888887665444 456788999999888887643 235999999876655554433 2 6778887778
Q ss_pred CcEEEEeCC--------------------------CCeEEEEEcCCCce-eEeccCCCCcceEEEeCCCceEEEEecCC-
Q psy952 100 RKLYWLDRH--------------------------SKQLDVAELDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNL- 151 (573)
Q Consensus 100 ~~LY~td~~--------------------------~~~I~~~~ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~- 151 (573)
+.|+++... ...|++.++.+... +.+.. - ....+++.|.. .+|.+....
T Consensus 116 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~ 192 (347)
T 2gop_A 116 RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREI 192 (347)
T ss_dssp SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCS
T ss_pred CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccc
Confidence 888887421 35788899987665 44444 2 77889999955 555554321
Q ss_pred ------cCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCC-------CCeEEEEeCCCCcEEEEEeCCc
Q psy952 152 ------QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAH-------LDYIASVDLDGKHKHIVISGQK 218 (573)
Q Consensus 152 ------~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~-------~~~I~~~~~dG~~~~~l~~~~~ 218 (573)
...|+.++ .|. .+.+. .. . . -..+.+.+.+|+++... ...|+.++ .|. .+.+....
T Consensus 193 ~~~~~~~~~l~~~d-~~~-~~~l~--~~--~-~-~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~~- 261 (347)
T 2gop_A 193 IPQYFKFWDIYIWE-DGK-EEKMF--EK--V-S-FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKE-VMGILDEV- 261 (347)
T ss_dssp SCCSSCCEEEEEEE-TTE-EEEEE--EE--E-S-EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSC-EEESSTTC-
T ss_pred cccccccccEEEeC-CCc-eEEec--cC--c-c-eeeECCCCCEEEEEEccccCCccccceEEEEC-CCc-eEeccccC-
Confidence 33677777 443 33444 22 1 1 12336677788776533 35788888 443 33333221
Q ss_pred cceeEE-EeeeCCeEEEecCC--CCceEEEeccCCcce
Q psy952 219 VPHVFA-LTLFEDHIYWTDWN--TKSINRADKFNGRDY 253 (573)
Q Consensus 219 ~~~p~~-ia~~~~~lywtd~~--~~~I~~~~~~~g~~~ 253 (573)
-..... +++. +.||++-.. ...|+ ++ +|+..
T Consensus 262 ~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~--~g~~~ 295 (347)
T 2gop_A 262 DRGVGQAKIKD-GKVYFTLFEEGSVNLY-IW--DGEIK 295 (347)
T ss_dssp CSEEEEEEEET-TEEEEEEEETTEEEEE-EE--SSSEE
T ss_pred CcccCCccEEc-CcEEEEEecCCcEEEE-Ec--CCceE
Confidence 122333 4444 446665333 33455 55 45443
No 208
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.09 E-value=0.00076 Score=66.88 Aligned_cols=240 Identities=8% Similarity=-0.022 Sum_probs=139.9
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCc----eeecccCCcceEEEEEEcCCC-EEEEEECCCCeEEEEEc-CCCcc
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQ----YSLVHQDLLNVVAMDFHYKEN-RFYFADVAAKTIYRSRV-GSTEK 79 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~----~~~~~~~~~~~~~v~~d~~~~-~ly~~d~~~~~I~~~~~-~g~~~ 79 (573)
.+|.+......+|+.+. ...|+..++.... ..........+..++|.+..+ .|+.+. ..+.|+.+++ .+...
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGSPSF 92 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSSSSE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEeccCCce
Confidence 34444332234555554 4678888876554 333334445688999998766 566554 5678999998 76655
Q ss_pred eEEEcC--CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC---------CceeEeccCCCCcceEEEeCCCceEEEEe
Q psy952 80 ERVIRH--DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG---------TNRKTLKTAIQDPRGITLHPGIGYVYFSS 148 (573)
Q Consensus 80 ~~i~~~--~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg---------~~~~~l~~~~~~P~~Iavdp~~g~LYwtd 148 (573)
..+ .. ....+..|++.+ +.++++-...+.|.+.++.. ......+.....+..|+++|.. |+...
T Consensus 93 ~~~-~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~ 167 (342)
T 1yfq_A 93 QAL-TNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGM 167 (342)
T ss_dssp EEC-BSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEE
T ss_pred Eec-cccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEe
Confidence 433 33 335678899987 44555555678898888763 2211112333457889998843 55554
Q ss_pred cCCcCeEEEEeccC-CC--cEEEEecCCCCCCCceEEEec-cCCeEEEEeCCCCeEEEEeCCCC-------cEEEEEeCC
Q psy952 149 WNLQAYIGKIGMDG-SN--FTRILTHEDDIAWPNALTLDY-FTERLYWADAHLDYIASVDLDGK-------HKHIVISGQ 217 (573)
Q Consensus 149 ~~~~~~I~r~~ldG-~~--~~~l~~~~~~l~~P~glaiD~-~~~~LYw~D~~~~~I~~~~~dG~-------~~~~l~~~~ 217 (573)
....|...++.. .. ..... ...-..+..|++.+ .+..|+.+ ...+.|...+++.. ....+....
T Consensus 168 --~d~~i~i~d~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 168 --NNSQVQWFRLPLCEDDNGTIEE--SGLKYQIRDVALLPKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp --STTEEEEEESSCCTTCCCEEEE--CSCSSCEEEEEECSGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred --CCCeEEEEECCccccccceeee--cCCCCceeEEEECCCCCCEEEEE-ecCCcEEEEEEcCCCcccccccceeeeccc
Confidence 355777777765 22 22233 23333467888887 55555544 45677777666543 233332221
Q ss_pred c-------cceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 218 K-------VPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 218 ~-------~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
. ......|++. .+.++++-...+.|...+..+++....+.
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 0 1145677764 34444554566778888876676555443
No 209
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.09 E-value=0.0015 Score=70.53 Aligned_cols=245 Identities=10% Similarity=-0.024 Sum_probs=145.6
Q ss_pred CCceeeCCCCCCEEEEEecccEEEEEcCCC----c-eeecccCCcc-eEEEEEEc--CCCEEEEEECCCCeEEEEEcCCC
Q psy952 6 ESTCKRRDSIKPWLIFSNKYYVRNMSLDAT----Q-YSLVHQDLLN-VVAMDFHY--KENRFYFADVAAKTIYRSRVGST 77 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s~~~~I~~i~l~g~----~-~~~~~~~~~~-~~~v~~d~--~~~~ly~~d~~~~~I~~~~~~g~ 77 (573)
..++.+......+|+++..+.|+..++... . ...+...... +..|+|.+ ..+.|+.+. ..+.|..+++...
T Consensus 20 ~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~dg~v~vw~~~~~ 98 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-ESGKVIVWGWTFD 98 (615)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-TTSEEEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-CCCEEEEEeCCCC
Confidence 344555444456788888888999998754 3 3333333455 88999998 666666554 4677888887422
Q ss_pred --------cceEEEcCCCCCcceeEEeecCCcEEEEeCCC---CeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEE
Q psy952 78 --------EKERVIRHDSHGLEGLAVDWVGRKLYWLDRHS---KQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYF 146 (573)
Q Consensus 78 --------~~~~i~~~~~~~p~glavD~~~~~LY~td~~~---~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYw 146 (573)
.....+......+..|++.+.++.|+.+.... +.|.+.+ .+.....+.........|++.|...++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 177 (615)
T 1pgu_A 99 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSM 177 (615)
T ss_dssp GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEE
T ss_pred cccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEE
Confidence 11112222335788999998887777776442 4565555 33333344445556889999997664555
Q ss_pred EecCCcCeEEEEeccCCCcEEEEecCCCCC---CCceEEEecc-CCeEEEEeCCCCeEEEEeCCCCcEEEEE-e---CCc
Q psy952 147 SSWNLQAYIGKIGMDGSNFTRILTHEDDIA---WPNALTLDYF-TERLYWADAHLDYIASVDLDGKHKHIVI-S---GQK 218 (573)
Q Consensus 147 td~~~~~~I~r~~ldG~~~~~l~~~~~~l~---~P~glaiD~~-~~~LYw~D~~~~~I~~~~~dG~~~~~l~-~---~~~ 218 (573)
+-. ....|...++........+ ...-. ....+++.+. +..|+.+ ...+.|...++........+ . ..
T Consensus 178 ~~~-~d~~v~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~- 252 (615)
T 1pgu_A 178 TVG-DDGSVVFYQGPPFKFSASD--RTHHKQGSFVRDVEFSPDSGEFVITV-GSDRKISCFDGKSGEFLKYIEDDQEPV- 252 (615)
T ss_dssp EEE-TTTEEEEEETTTBEEEEEE--CSSSCTTCCEEEEEECSTTCCEEEEE-ETTCCEEEEETTTCCEEEECCBTTBCC-
T ss_pred EEe-CCCcEEEEeCCCcceeeee--cccCCCCceEEEEEECCCCCCEEEEE-eCCCeEEEEECCCCCEeEEeccccccc-
Confidence 542 3566766665543332223 22222 4568999887 5555544 45678888887654433333 2 21
Q ss_pred cceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 219 VPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 219 ~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
.....+|++.++.++++-...+.|...+..+++....+.
T Consensus 253 ~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 253 QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 234567776544555555556777777766666555443
No 210
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.08 E-value=0.0092 Score=58.44 Aligned_cols=255 Identities=11% Similarity=0.006 Sum_probs=148.6
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR 84 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~ 84 (573)
.++.+.....++|+.+. ...|+..++..... ..+......+..++|.+..+.|+.. ...+.|...++........+.
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCcEEEEEe
Confidence 34555443345555554 46788888875543 2222233457789999876666554 456789999987654433343
Q ss_pred CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-e-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-R-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
.....+..|++.+.+.. +++-...+.|.+.++.... . ..+.........++++|..+.++.+-. ....|...++..
T Consensus 95 ~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs-~D~~v~iwd~~~ 172 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC-LDRTVKVWSLGQ 172 (304)
T ss_dssp CCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE-TTSEEEEEETTC
T ss_pred CCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe-CCCeEEEEECCC
Confidence 33457889999876554 4555567889998886542 2 223344455789999996666655542 345676666643
Q ss_pred CC-cEEEEecCCCCCCCceEEEecc-CCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCC
Q psy952 163 SN-FTRILTHEDDIAWPNALTLDYF-TERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNT 239 (573)
Q Consensus 163 ~~-~~~l~~~~~~l~~P~glaiD~~-~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~ 239 (573)
.. ...+. .........+.+.+. ++.+.++-...+.|...++........+.+. ......+++. .+.++.+-...
T Consensus 173 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 173 STPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH-MSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp SSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEECSSSSEEEEEETT
T ss_pred CCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC-CCCEEEEEECCCCCEEEEEcCC
Confidence 33 23333 122222344555442 3445555556778888888755443333332 3345566664 34566666667
Q ss_pred CceEEEeccCCcceEEEcccCCCceeee
Q psy952 240 KSINRADKFNGRDYRVLRNTTHRPYDIH 267 (573)
Q Consensus 240 ~~I~~~~~~~g~~~~~l~~~~~~p~~i~ 267 (573)
+.|..-+..+++....+.........++
T Consensus 250 g~i~iWd~~~~~~~~~~~~~~~~~~~~~ 277 (304)
T 2ynn_A 250 GTLKIWNSSTYKVEKTLNVGLERSWCIA 277 (304)
T ss_dssp SCEEEEETTTCCEEEEECCSSSSEEEEE
T ss_pred CeEEEEECCCCceeeeccCCCccEEEEE
Confidence 7787777777776666654433333333
No 211
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.08 E-value=0.0011 Score=67.22 Aligned_cols=204 Identities=9% Similarity=0.015 Sum_probs=135.3
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC--CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH--DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR 122 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~--~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~ 122 (573)
..+..|+|.+.+..++++-...+.|..+++.+.....++.. ....+..|++.+..++++++-...+.|.+.++.+...
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI 153 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce
Confidence 45789999987635555555677899999987655544432 3357788888764445555556678999999998666
Q ss_pred eEeccCC---CCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCe
Q psy952 123 KTLKTAI---QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDY 199 (573)
Q Consensus 123 ~~l~~~~---~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~ 199 (573)
..+.... .....|++.|...+|+... ....|...++.+.....+. ..-.....|++.+.+..++++-...+.
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGD--STGRLLLLGLDGHEIFKEK---LHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEE--TTSEEEEEETTSCEEEEEE---CSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEEC--CCCCEEEEECCCCEEEEec---cCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 6555322 4478999999777666655 3568888888766555554 333456789999777646666666788
Q ss_pred EEEEeCCC-----CcEEEEEeCCccceeEEEeee--CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 200 IASVDLDG-----KHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 200 I~~~~~dG-----~~~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
|...++.. .....+ .. .....+|++. .+.++++-...+.|...+..+++....+
T Consensus 229 i~iwd~~~~~~~~~~~~~~-~~--~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 229 VKLWDLRNIKDKNSYIAEM-PH--EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEEEEGGGCCSTTCEEEEE-EC--SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEEEeCCCCCcccceEEEe-cC--CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 88888763 222333 22 3456778874 3455555556677887777666654433
No 212
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.06 E-value=0.0042 Score=62.88 Aligned_cols=241 Identities=8% Similarity=-0.066 Sum_probs=141.6
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCc-------eeecccCCcceEEEEEEcC---CC---EEEEEECCCCeEEEE
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQ-------YSLVHQDLLNVVAMDFHYK---EN---RFYFADVAAKTIYRS 72 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~-------~~~~~~~~~~~~~v~~d~~---~~---~ly~~d~~~~~I~~~ 72 (573)
.+|.+.. + .+|+.+. ...|+..++.... ...+......+..|+|.+. ++ .++++-...+.|+.+
T Consensus 19 i~~~~~~-~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw 96 (397)
T 1sq9_A 19 IFSVSAC-N-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 96 (397)
T ss_dssp EEEEEEC-S-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEE
T ss_pred eEEEEec-C-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEE
Confidence 3455543 3 5555554 4688888887654 2233333455789999976 24 444554556778888
Q ss_pred EcCCCcc-----eEEEcCC-----CCCcceeEEe----ecCCc-EEEEeCCCCeEEEEEcCC-------Ccee-----Ee
Q psy952 73 RVGSTEK-----ERVIRHD-----SHGLEGLAVD----WVGRK-LYWLDRHSKQLDVAELDG-------TNRK-----TL 125 (573)
Q Consensus 73 ~~~g~~~-----~~i~~~~-----~~~p~glavD----~~~~~-LY~td~~~~~I~~~~ldg-------~~~~-----~l 125 (573)
++..... ...+... ...+..|++. +.++. |+.+. ..+.|.+.++.. .... .+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 175 (397)
T 1sq9_A 97 RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLNWSPTLEL 175 (397)
T ss_dssp EEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred EccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceeeccCccee
Confidence 8765442 2223222 2577888888 76666 55444 567888888765 2222 33
Q ss_pred c-------cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCC---C---CCCCceEEEeccCCeEEE
Q psy952 126 K-------TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHED---D---IAWPNALTLDYFTERLYW 192 (573)
Q Consensus 126 ~-------~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~---~---l~~P~glaiD~~~~~LYw 192 (573)
. .....+..|+++|.. +|+... ....|...++........+ .. . -.....|++++.+..|+.
T Consensus 176 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~--~~~~~h~~~~~~i~~i~~~~~~~~l~~ 250 (397)
T 1sq9_A 176 QGTVESPMTPSQFATSVDISERG-LIATGF--NNGTVQISELSTLRPLYNF--ESQHSMINNSNSIRSVKFSPQGSLLAI 250 (397)
T ss_dssp EEEECCSSSSCCCCCEEEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEE--ECCC---CCCCCEEEEEECSSTTEEEE
T ss_pred eeeeccccCCCCCceEEEECCCc-eEEEEe--CCCcEEEEECCCCceeEEE--eccccccccCCccceEEECCCCCEEEE
Confidence 1 234458899999965 444433 4567888887644333333 12 2 345578999877666665
Q ss_pred EeCCC---CeEEEEeCCCCcEEEEEeC-------------CccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEE
Q psy952 193 ADAHL---DYIASVDLDGKHKHIVISG-------------QKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRV 255 (573)
Q Consensus 193 ~D~~~---~~I~~~~~dG~~~~~l~~~-------------~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~ 255 (573)
+. .. +.|...++........+.. . ......|++. ++.++++-...+.|...+..+++....
T Consensus 251 ~~-~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 251 AH-DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp EE-EETTEEEEEEEETTTCCEEEEECBC--------CCBSB-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred Ee-cCCCCceEEEEECCCCcccceeccCccccccccccccc-CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEE
Confidence 54 34 6888888865444333332 1 2356677774 344555555667788777777766555
Q ss_pred Ec
Q psy952 256 LR 257 (573)
Q Consensus 256 l~ 257 (573)
+.
T Consensus 329 ~~ 330 (397)
T 1sq9_A 329 LN 330 (397)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 213
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.05 E-value=0.00082 Score=69.77 Aligned_cols=200 Identities=10% Similarity=-0.002 Sum_probs=133.7
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC----------CcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEE
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS----------TEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLD 113 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g----------~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~ 113 (573)
...+..|+|.+.++.++++-...+.|+.+++.. ......+...-..+.+|++.+.+..++++-...+.|.
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEE
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEE
Confidence 345789999987677888877788899888864 1222222223356788888877665777777788999
Q ss_pred EEEcCCCc--------eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCC----CcEEEEecCCCCCCCceE
Q psy952 114 VAELDGTN--------RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS----NFTRILTHEDDIAWPNAL 181 (573)
Q Consensus 114 ~~~ldg~~--------~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~----~~~~l~~~~~~l~~P~gl 181 (573)
+.++.... ...+......+..|+++|..+.++++.. ....|...++... ....+. ..-..++.|
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~i~i~d~~~~~~~~~~~~~~---~~~~~v~~i 283 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA-DDQKLMIWDTRNNNTSKPSHTVD---AHTAEVNCL 283 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETTCSCSSSCSEEEE---CCSSCEEEE
T ss_pred EEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe-CCCeEEEEECCCCCCCcceeEee---cCCCCeEEE
Confidence 99987521 1122234445889999997777877763 3567877777643 222332 333457899
Q ss_pred EEeccCCeEEEEeCCCCeEEEEeCCCC-c-EEEEEeCCccceeEEEeee--CCeEEEecCCCCceEEEeccC
Q psy952 182 TLDYFTERLYWADAHLDYIASVDLDGK-H-KHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 182 aiD~~~~~LYw~D~~~~~I~~~~~dG~-~-~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~~ 249 (573)
++.+.+..++++-...+.|...++... . ...+... ......|++. +..++.+-...+.|...+...
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h--~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH--KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC--SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC--CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 999888888888778889999998752 2 3333322 3456777774 446788777777777766544
No 214
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.0055 Score=63.79 Aligned_cols=224 Identities=10% Similarity=-0.039 Sum_probs=134.9
Q ss_pred CceeeCCCCCCEEEEEe--cccEEEEEcC--CCce-eecc--cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc
Q psy952 7 STCKRRDSIKPWLIFSN--KYYVRNMSLD--ATQY-SLVH--QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK 79 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~--~~~I~~i~l~--g~~~-~~~~--~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 79 (573)
.++.+......+|+++. ...|+..++. .... ..+. .....+.+|+|.+.+..|+.++. .+.|+.+++.....
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSIPE 183 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSCCC
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCccc
Confidence 45665544445654443 3678888876 4433 2221 23356889999998888887765 67899998865432
Q ss_pred eE----EEcCCCCCcceeEEeec--CCcEEEEeCCCCeEEEEEcCCCc-eeEec-cCCCCcceEEEeCCCceEEEEecCC
Q psy952 80 ER----VIRHDSHGLEGLAVDWV--GRKLYWLDRHSKQLDVAELDGTN-RKTLK-TAIQDPRGITLHPGIGYVYFSSWNL 151 (573)
Q Consensus 80 ~~----i~~~~~~~p~glavD~~--~~~LY~td~~~~~I~~~~ldg~~-~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~ 151 (573)
.. .+......+..|++.+. .++++++-...+.|.+.++.... ...+. .....+..|+++ ...+|+... .
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~--~ 260 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG--G 260 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE--S
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe--C
Confidence 21 11112357888999886 14444444456789999886443 34434 344567899998 555565554 3
Q ss_pred cCeEEEEeccCCCcEEEEecC-----------------------CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeC--C
Q psy952 152 QAYIGKIGMDGSNFTRILTHE-----------------------DDIAWPNALTLDYFTERLYWADAHLDYIASVDL--D 206 (573)
Q Consensus 152 ~~~I~r~~ldG~~~~~l~~~~-----------------------~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~--d 206 (573)
...|...++........+... ..-....+|++.+.+..||.+....+.|...++ .
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~ 340 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence 567777777644432222100 001224578888888888888767788877777 2
Q ss_pred -CCcEEEE--EeCCccceeEEEeeeCCeEEEec
Q psy952 207 -GKHKHIV--ISGQKVPHVFALTLFEDHIYWTD 236 (573)
Q Consensus 207 -G~~~~~l--~~~~~~~~p~~ia~~~~~lywtd 236 (573)
+...+.+ +.. -..+.+|++..+.+|++-
T Consensus 341 ~~~~l~~~~~~~~--~~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 341 QKGDLALKQIITF--PYNVISLSAHNDEFQVTL 371 (450)
T ss_dssp STTCEEEEEEEEC--SSCEEEEEEETTEEEEEE
T ss_pred CCCceeeccEecc--CCceEEEEecCCcEEEEE
Confidence 2222222 222 246889999878777763
No 215
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.0068 Score=60.22 Aligned_cols=224 Identities=8% Similarity=0.030 Sum_probs=133.0
Q ss_pred CCEEEEEe-cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECC----CCeEEEEEcCCCcc-----------
Q psy952 16 KPWLIFSN-KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVA----AKTIYRSRVGSTEK----------- 79 (573)
Q Consensus 16 ~~~l~~s~-~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~----~~~I~~~~~~g~~~----------- 79 (573)
..+|+.+. ...|+..++..............+..++|.+....|+.+... .+.|..+++.....
T Consensus 86 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~ 165 (369)
T 3zwl_B 86 TKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEP 165 (369)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccce
Confidence 34555544 467888888765544444455668899999877777776543 26777777654311
Q ss_pred -eEEEc-CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC--CceeEeccCCCCcceEEEeCCCceEEEEecCCcCeE
Q psy952 80 -ERVIR-HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG--TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYI 155 (573)
Q Consensus 80 -~~i~~-~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg--~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I 155 (573)
..+.. .+...+..+++.+.++.|+.+. ..+.|.+.++.. .....+........+|+++|...+|+... ....|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i 242 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS--RDTNS 242 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSEE
T ss_pred eeeccCCcCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec--CCceE
Confidence 11111 1112678888888666666655 467899999876 22333334555688999999766666554 35678
Q ss_pred EEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC-------------eEEEEeCCCCcEEEEEeCCcccee
Q psy952 156 GKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD-------------YIASVDLDGKHKHIVISGQKVPHV 222 (573)
Q Consensus 156 ~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~-------------~I~~~~~dG~~~~~l~~~~~~~~p 222 (573)
...++........+ ..-.....+++.+.+..|+.+..... .|...++........+.+. ....
T Consensus 243 ~v~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~v 318 (369)
T 3zwl_B 243 FLVDVSTLQVLKKY---ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-FGPL 318 (369)
T ss_dssp EEEETTTCCEEEEE---ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECC-SSCE
T ss_pred EEEECCCCceeeee---cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc-cCcE
Confidence 88887755544444 22334578899988888887765433 4555555444433333322 3445
Q ss_pred EEEeee-CCeEEEecCCCCceEEEe
Q psy952 223 FALTLF-EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 223 ~~ia~~-~~~lywtd~~~~~I~~~~ 246 (573)
..|++. ++.++++-...+.|...+
T Consensus 319 ~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 319 NTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEE
Confidence 666663 334444433445554433
No 216
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.03 E-value=0.00057 Score=79.64 Aligned_cols=220 Identities=10% Similarity=-0.025 Sum_probs=138.6
Q ss_pred EecccEE-EEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCC
Q psy952 22 SNKYYVR-NMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGR 100 (573)
Q Consensus 22 s~~~~I~-~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~ 100 (573)
+....|+ .+++.+.....+......+..++|.+.++.|+++.. .+.|+.+++.++....++......+..+++.+.++
T Consensus 355 s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSREAMITDFTISDNSR 433 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC
T ss_pred ECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCCCCCccceEECCCCC
Confidence 3445677 788877665544444456889999998888887764 46899999987666555544445568899998888
Q ss_pred cEEEEeCC---------CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcC----------------eE
Q psy952 101 KLYWLDRH---------SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQA----------------YI 155 (573)
Q Consensus 101 ~LY~td~~---------~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~----------------~I 155 (573)
.|.++... .+.|.+.++.+.....+......+..++++|...+|||+...... .+
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~ 513 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKP 513 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEE
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCcee
Confidence 88887542 258999999876655555566667889999988889988642111 12
Q ss_pred EEEecc------------------------CCCcEEEEecCCCCCCCceEEEeccCCeEEEE-------------eCCCC
Q psy952 156 GKIGMD------------------------GSNFTRILTHEDDIAWPNALTLDYFTERLYWA-------------DAHLD 198 (573)
Q Consensus 156 ~r~~ld------------------------G~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~-------------D~~~~ 198 (573)
+.+.+. |....++. ....-....++++.+. +++|++ .....
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~-l~~~~~~~~~~~~s~d-g~~~~~~~~~g~~~~~~~~~~~~~ 591 (1045)
T 1k32_A 514 FVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSP-INVDPGDYRMIIPLES-SILIYSVPVHGEFAAYYQGAPEKG 591 (1045)
T ss_dssp EEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEE-CSCCCBCEEEEEECSS-EEEEEECCCCCSHHHHHHCCCCCE
T ss_pred EEEEeCCCCCCccccCcCccccccccccccCHhHceEE-cCCCCCChhheEEcCC-CeEEEEecccCcccccccccCCCc
Confidence 222221 11100000 0001112356788754 454442 22345
Q ss_pred eEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEEecCCCCceEEEeccCCc
Q psy952 199 YIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 199 ~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lywtd~~~~~I~~~~~~~g~ 251 (573)
.|+++++.+...+.+.. .+.++++ ++.+|+++... .|..++..+++
T Consensus 592 ~l~~~d~~~~~~~~l~~-----~v~~~~~S~DG~~l~~~~~~--~i~~~d~~~~~ 639 (1045)
T 1k32_A 592 VLLKYDVKTRKVTEVKN-----NLTDLRLSADRKTVMVRKDD--GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEEETTTCCEEEEEE-----EEEEEEECTTSCEEEEEETT--SCEEEEESSCT
T ss_pred eEEEEECCCCcEEEeec-----CcceEEECCCCCEEEEEcCC--cEEEEeCccCc
Confidence 79999998877766652 3445555 56788888655 57667665665
No 217
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.02 E-value=0.0063 Score=60.78 Aligned_cols=237 Identities=11% Similarity=0.081 Sum_probs=138.5
Q ss_pred CCceeeCCCCCCEEEEE-ecccEEEEEcCCCc---eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE
Q psy952 6 ESTCKRRDSIKPWLIFS-NKYYVRNMSLDATQ---YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER 81 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s-~~~~I~~i~l~g~~---~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 81 (573)
..+|.+......+|+.+ ..+.|+.+++.+.. ...+......+.+|+|.+..+.|+.+. ..+.|..+++.......
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeee
Confidence 34555554444567666 46788888887764 222333445688999998766666554 55678888876544222
Q ss_pred EE--cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce----eEec-cCCCCcceEEEeCCCceEEEEecCCcCe
Q psy952 82 VI--RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR----KTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAY 154 (573)
Q Consensus 82 i~--~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~----~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~ 154 (573)
.. ......+..|++.+.++.|+.+. ..+.|.+.+++.... ..+. .....+..|+++|...+|+... ....
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~ 165 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS--CDFK 165 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE--TTSC
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc--CCCC
Confidence 22 22235678899987666666655 457788877765442 2222 2345688999999665565554 2455
Q ss_pred EEEEeccC----------------CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCc
Q psy952 155 IGKIGMDG----------------SNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQK 218 (573)
Q Consensus 155 I~r~~ldG----------------~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~ 218 (573)
|...++.. ...+.+......-.....+++.+.+..|+.+. ..+.|...++........+...
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~- 243 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKMAVATLASE- 243 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTTEEEEEECS-
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCceeEEEccC-
Confidence 66665421 01111211022333457899987666666554 5678888888644443333332
Q ss_pred cceeEEEeee-CCeEEEecCCCCceEEEeccC
Q psy952 219 VPHVFALTLF-EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 219 ~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~ 249 (573)
......+++. ++.++.+- ..+.|...+..+
T Consensus 244 ~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 244 TLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 2345777774 44544444 556666555444
No 218
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.02 E-value=0.00048 Score=70.42 Aligned_cols=239 Identities=9% Similarity=-0.032 Sum_probs=143.8
Q ss_pred eeeCCCCCCEEEEEe-cccEEEEEcCC----C-ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc----
Q psy952 9 CKRRDSIKPWLIFSN-KYYVRNMSLDA----T-QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE---- 78 (573)
Q Consensus 9 C~~~~~~~~~l~~s~-~~~I~~i~l~g----~-~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~---- 78 (573)
+.+......+|+.+. ...|+..++.. . ....+......+..|+|.+.++.++++-...+.|+.+++....
T Consensus 72 ~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 72 DLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp EEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT
T ss_pred EEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc
Confidence 443332334555543 46788888865 2 2222333345578999998756666666677889999887654
Q ss_pred --ceEEE---cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc-C------CCCcceEEEeCCCceEEE
Q psy952 79 --KERVI---RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT-A------IQDPRGITLHPGIGYVYF 146 (573)
Q Consensus 79 --~~~i~---~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~-~------~~~P~~Iavdp~~g~LYw 146 (573)
....+ ......+..|++.+.++.++++-...+.|.+.++........+. . ...+..|+++|....+++
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 21111 11235678899987767788887778899999987654433332 2 455889999997655555
Q ss_pred EecCCcC---eEEEEeccCCC-cEEEEecC-CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccce
Q psy952 147 SSWNLQA---YIGKIGMDGSN-FTRILTHE-DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPH 221 (573)
Q Consensus 147 td~~~~~---~I~r~~ldG~~-~~~l~~~~-~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~ 221 (573)
+-.. .. .|...++.... ....+ . ..-.....|++.+.+++++++-...+.|...++........+... ...
T Consensus 232 ~~~~-d~~~~~i~~~d~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~ 307 (416)
T 2pm9_A 232 TATG-SDNDPSILIWDLRNANTPLQTL--NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR-GNW 307 (416)
T ss_dssp EEEC-CSSSCCCCEEETTSTTSCSBCC--CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS-SSC
T ss_pred EEEC-CCCCceEEEEeCCCCCCCcEEe--ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC-CCc
Confidence 5432 22 66666665432 11112 1 223345788888745666666566788888888655443333332 234
Q ss_pred eEEEeeeC-C-eEEEecCCCCceEEEeccCCc
Q psy952 222 VFALTLFE-D-HIYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 222 p~~ia~~~-~-~lywtd~~~~~I~~~~~~~g~ 251 (573)
...|++.. + .++++-...+.|...+..++.
T Consensus 308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred eEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 55677643 3 577776666777666654443
No 219
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.01 E-value=0.00028 Score=82.30 Aligned_cols=209 Identities=11% Similarity=0.114 Sum_probs=136.9
Q ss_pred EEEEEecccEEEEEcCCCceeecccC-----------CcceEEEEEE-cCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 18 WLIFSNKYYVRNMSLDATQYSLVHQD-----------LLNVVAMDFH-YKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 18 ~l~~s~~~~I~~i~l~g~~~~~~~~~-----------~~~~~~v~~d-~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
+|+++....|+.+++.+..+..+... ...+..++|. +.+..|.++. .+.|+.+++.+.....+. .
T Consensus 258 ~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~-~ 334 (1045)
T 1k32_A 258 RILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVP-E 334 (1045)
T ss_dssp CEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECS-C
T ss_pred EEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEcc-C
Confidence 45556666788787755444322111 1146789999 8888888776 568888888765543322 2
Q ss_pred CCC-CcceeEEeecCCcEEEEeCCCCeEE-EEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCC
Q psy952 86 DSH-GLEGLAVDWVGRKLYWLDRHSKQLD-VAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS 163 (573)
Q Consensus 86 ~~~-~p~glavD~~~~~LY~td~~~~~I~-~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~ 163 (573)
... .+..+++. .++.|+++.. ...|+ +.++.+...+.+......+..++++|...+|+++.. ...|...++.+.
T Consensus 335 ~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~--~~~v~~~d~~tg 410 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND--RFEIMTVDLETG 410 (1045)
T ss_dssp CSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET--TSEEEEEETTTC
T ss_pred CCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECC--CCeEEEEECCCC
Confidence 222 45566666 5556777655 56888 889988766666544456889999998888887763 458999998766
Q ss_pred CcEEEEecCCCCCCCceEEEeccCCeEEEEeCC---------CCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeE
Q psy952 164 NFTRILTHEDDIAWPNALTLDYFTERLYWADAH---------LDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHI 232 (573)
Q Consensus 164 ~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~---------~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~l 232 (573)
..+.+. .........+++.+++.+|.++... ...|+..++++.....+... ...+..+++ ++.+|
T Consensus 411 ~~~~~~--~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~--~~~~~~~~~spdG~~l 486 (1045)
T 1k32_A 411 KPTVIE--RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE--NSHDYAPAFDADSKNL 486 (1045)
T ss_dssp CEEEEE--ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS--SSBEEEEEECTTSCEE
T ss_pred ceEEec--cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC--CcccCCceEcCCCCEE
Confidence 655555 2333344789999988888887542 25799999987654433322 334566665 45678
Q ss_pred EEecC
Q psy952 233 YWTDW 237 (573)
Q Consensus 233 ywtd~ 237 (573)
||+..
T Consensus 487 ~~~s~ 491 (1045)
T 1k32_A 487 YYLSY 491 (1045)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 87754
No 220
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.00 E-value=0.0088 Score=61.47 Aligned_cols=244 Identities=11% Similarity=0.025 Sum_probs=140.5
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
+|.+......+|+.+. ...|+..++........+. ....+..|+|++.++ ++++-...+.|..+++.+......+..
T Consensus 112 ~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~~~~~~~ 190 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHG 190 (410)
T ss_dssp EEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCEEECCCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEcC
Confidence 3444332234444443 4678888887554433323 344578999997554 555555667888888876543222322
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
....+..|++.+.++.| ++-...+.|.+.++.... ..++.........++++|.. .++++-. ....|...++....
T Consensus 191 h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s-~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCS-NDQTVRVWVVATKE 267 (410)
T ss_dssp CSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEE-TTSCEEEEETTTCC
T ss_pred CCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC-CEEEEEc-CCCeEEEEECCCCc
Confidence 33567888998755544 555567889999986443 34444444557888888854 4444432 34566666665443
Q ss_pred cEEEEecCCCCCCCceEEEeccC-------------------CeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEE
Q psy952 165 FTRILTHEDDIAWPNALTLDYFT-------------------ERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFAL 225 (573)
Q Consensus 165 ~~~l~~~~~~l~~P~glaiD~~~-------------------~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~i 225 (573)
....+ ...-.....+++.+.. +.+.++-...+.|...++........+.+. .....+|
T Consensus 268 ~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h-~~~v~~v 344 (410)
T 1vyh_C 268 CKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGV 344 (410)
T ss_dssp EEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEE
T ss_pred eeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC-CCcEEEE
Confidence 33333 2222334566665532 445666666778888887654433333332 2345677
Q ss_pred eee-CCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 226 TLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 226 a~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
++. ++.++++-...+.|..-+..+++...++..
T Consensus 345 ~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp EECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 774 344555555667777776666665555543
No 221
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.00 E-value=0.0074 Score=59.81 Aligned_cols=219 Identities=12% Similarity=0.085 Sum_probs=129.2
Q ss_pred CEEEEEe-cccEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeE
Q psy952 17 PWLIFSN-KYYVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLA 94 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gla 94 (573)
++|+-+. ...|+..++..... ..+......+..++|.+..+.|. +-...+.|..+++........+...-..+..|+
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 3444333 46788888865433 23323334566889998665554 455677898889876554444443345678899
Q ss_pred EeecCCcEEEEeCCCCeEEEEEcCCCce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCC
Q psy952 95 VDWVGRKLYWLDRHSKQLDVAELDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHED 173 (573)
Q Consensus 95 vD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~ 173 (573)
+.+.++.|... ...+.|.+.++..... .++.......+.|+++|...+|+... ....|...++........+ ..
T Consensus 172 ~spdg~~lasg-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s--~dg~i~iwd~~~~~~~~~~--~~ 246 (321)
T 3ow8_A 172 YSPDGKYLASG-AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS--DDGYIKIYDVQHANLAGTL--SG 246 (321)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC--TTSCEEEEETTTCCEEEEE--CC
T ss_pred ECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc--CCCeEEEEECCCcceeEEE--cC
Confidence 98766555544 4567899999865443 33333445578999999655555443 3566777777655444333 23
Q ss_pred CCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeC-CeEEEecCCCCceE
Q psy952 174 DIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE-DHIYWTDWNTKSIN 243 (573)
Q Consensus 174 ~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~-~~lywtd~~~~~I~ 243 (573)
.-.....|++.+.+..|+- -...+.|...++........+.+. .....+|++.. +..+++-...+.|.
T Consensus 247 h~~~v~~~~~sp~~~~l~s-~s~D~~v~iwd~~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHFVS-SSSDKSVKVWDVGTRTCVHTFFDH-QDQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp CSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred CCCceEEEEECCCCCEEEE-EeCCCcEEEEeCCCCEEEEEEcCC-CCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 3445578899876655554 445677888887654433223222 23566777643 33344433344443
No 222
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.00 E-value=0.00068 Score=75.83 Aligned_cols=230 Identities=10% Similarity=0.065 Sum_probs=132.9
Q ss_pred CEEEEEec----------ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC
Q psy952 17 PWLIFSNK----------YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD 86 (573)
Q Consensus 17 ~~l~~s~~----------~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~ 86 (573)
.+|+++.. ..|+.+++.+.+...+.........++|.+.+++|.++. .+.|+.+++.++....+...+
T Consensus 74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 74 QFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCSCC
T ss_pred CEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCceEEEcCCC
Confidence 45666654 456788888776555444445678889999888887773 357888888765544333222
Q ss_pred ------------------CCCcceeEEeecCCcEEEEe--CC---------------------------------CCeEE
Q psy952 87 ------------------SHGLEGLAVDWVGRKLYWLD--RH---------------------------------SKQLD 113 (573)
Q Consensus 87 ------------------~~~p~glavD~~~~~LY~td--~~---------------------------------~~~I~ 113 (573)
+....++++.+.++.|.++. .. ..+|.
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 12223566777777666642 11 01466
Q ss_pred EEEcCC---C---ceeEecc------CCCCcceEEEeCCCceEE-EEecCC-cCeEEEEeccCCC-------cEEEE-ec
Q psy952 114 VAELDG---T---NRKTLKT------AIQDPRGITLHPGIGYVY-FSSWNL-QAYIGKIGMDGSN-------FTRIL-TH 171 (573)
Q Consensus 114 ~~~ldg---~---~~~~l~~------~~~~P~~Iavdp~~g~LY-wtd~~~-~~~I~r~~ldG~~-------~~~l~-~~ 171 (573)
+.++++ . ....+.. .......++..|....|+ +..... ...|...++++.. ...++ ..
T Consensus 232 v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~ 311 (740)
T 4a5s_A 232 VVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS 311 (740)
T ss_dssp EEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC
T ss_pred EEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc
Confidence 677776 4 3333322 122245677888655343 444221 3468888877654 22232 10
Q ss_pred CCC-CC--CCceEEEeccCCeEE-EEeC--CCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCC------C
Q psy952 172 EDD-IA--WPNALTLDYFTERLY-WADA--HLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWN------T 239 (573)
Q Consensus 172 ~~~-l~--~P~glaiD~~~~~LY-w~D~--~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~------~ 239 (573)
... +. .+..+++.+++..|+ |+.. +...|+.++.+|...+.|..+. ..-..-+.++++.||++-.. .
T Consensus 312 ~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~-~~v~~~~~~d~~~i~f~~~~~~~~~~~ 390 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGT-WEVIGIEALTSDYLYYISNEYKGMPGG 390 (740)
T ss_dssp SSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSS-SCEEEEEEECSSEEEEEESCGGGCTTC
T ss_pred CCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCC-EEEEEEEEEeCCEEEEEEecCCCCCce
Confidence 111 11 144678888888776 6643 3457999999998877766553 21111122457888887544 3
Q ss_pred CceEEEeccC
Q psy952 240 KSINRADKFN 249 (573)
Q Consensus 240 ~~I~~~~~~~ 249 (573)
..|++++..+
T Consensus 391 ~~ly~v~~~g 400 (740)
T 4a5s_A 391 RNLYKIQLID 400 (740)
T ss_dssp BEEEEEETTE
T ss_pred eEEEEEECCC
Confidence 4688887543
No 223
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.99 E-value=0.0033 Score=63.71 Aligned_cols=185 Identities=10% Similarity=0.024 Sum_probs=112.3
Q ss_pred EEEEEe-cccEEEEEcCCCc------eeecccC-----CcceEEEEEE----cCCCE-EEEEECCCCeEEEEEcCC----
Q psy952 18 WLIFSN-KYYVRNMSLDATQ------YSLVHQD-----LLNVVAMDFH----YKENR-FYFADVAAKTIYRSRVGS---- 76 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~------~~~~~~~-----~~~~~~v~~d----~~~~~-ly~~d~~~~~I~~~~~~g---- 76 (573)
+|+.+. ...|+.+++.... ...+... ...+..++|. +.... |+.+ ...+.|+.+++..
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT-DVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE-ETTSCEEEEEEESSSSH
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE-eCCCcEEEEeCCccccc
Confidence 444433 4678888876544 2222222 2668899999 87777 5554 4556777777764
Q ss_pred --C-cce-----EEE------cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccC-------CCCcceE
Q psy952 77 --T-EKE-----RVI------RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTA-------IQDPRGI 135 (573)
Q Consensus 77 --~-~~~-----~i~------~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~-------~~~P~~I 135 (573)
. ... .+. ......+..|++.+.+ ++++-...+.|.+.++........+.. ...+..|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 2 222 332 2223568889998755 666666778999999875443333333 5568899
Q ss_pred EEeCCCceEEEEecCCc---CeEEEEeccCCCcEEEEecCC-------------CCCCCceEEEeccCCeEEEEeCCCCe
Q psy952 136 TLHPGIGYVYFSSWNLQ---AYIGKIGMDGSNFTRILTHED-------------DIAWPNALTLDYFTERLYWADAHLDY 199 (573)
Q Consensus 136 avdp~~g~LYwtd~~~~---~~I~r~~ldG~~~~~l~~~~~-------------~l~~P~glaiD~~~~~LYw~D~~~~~ 199 (573)
+++|...+|+... .. ..|...++........+ .. .-.....|++.+.+..|+.+ ...+.
T Consensus 240 ~~~~~~~~l~~~~--~d~~~g~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~ 314 (397)
T 1sq9_A 240 KFSPQGSLLAIAH--DSNSFGCITLYETEFGERIGSL--SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA-GWDGK 314 (397)
T ss_dssp EECSSTTEEEEEE--EETTEEEEEEEETTTCCEEEEE--CBC--------CCBSBSSCEEEEEECSSSSEEEEE-ETTSE
T ss_pred EECCCCCEEEEEe--cCCCCceEEEEECCCCccccee--ccCcccccccccccccCCcEEEEEECCCCCEEEEE-eCCCe
Confidence 9999766666554 23 57887777644433333 22 23345688998766665554 46678
Q ss_pred EEEEeCCCCcE
Q psy952 200 IASVDLDGKHK 210 (573)
Q Consensus 200 I~~~~~dG~~~ 210 (573)
|...++.....
T Consensus 315 i~iwd~~~~~~ 325 (397)
T 1sq9_A 315 LRFWDVKTKER 325 (397)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEEcCCCce
Confidence 88888865444
No 224
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.99 E-value=0.00093 Score=74.15 Aligned_cols=229 Identities=10% Similarity=0.053 Sum_probs=134.6
Q ss_pred CCEEEEEec----------ccEEEEEcCCCceeecccCCc---ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEE
Q psy952 16 KPWLIFSNK----------YYVRNMSLDATQYSLVHQDLL---NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERV 82 (573)
Q Consensus 16 ~~~l~~s~~----------~~I~~i~l~g~~~~~~~~~~~---~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i 82 (573)
..+|+++.. ..|+.+++++.....+..... .+..++|.+.++.|.++.. +.|+.++++++....+
T Consensus 72 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 72 REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEE
T ss_pred CCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEE
Confidence 346666653 567788887765533322211 2567889998888888764 5899999887665555
Q ss_pred EcCCCC------------------CcceeEEeecCCcEEEEeCCC---------------------------------Ce
Q psy952 83 IRHDSH------------------GLEGLAVDWVGRKLYWLDRHS---------------------------------KQ 111 (573)
Q Consensus 83 ~~~~~~------------------~p~glavD~~~~~LY~td~~~---------------------------------~~ 111 (573)
...+.. .+.++++.+.++.|+++.... ..
T Consensus 150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 229 (723)
T 1xfd_A 150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSIS 229 (723)
T ss_dssp ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEE
T ss_pred ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeE
Confidence 443221 236788888888887764211 16
Q ss_pred EEEEEcCCCce-eEeccC------CCCcceEEEeCCCceEEEE-ecC-CcCeEEEEeccCCCcEEEEecC-CCCCC--Cc
Q psy952 112 LDVAELDGTNR-KTLKTA------IQDPRGITLHPGIGYVYFS-SWN-LQAYIGKIGMDGSNFTRILTHE-DDIAW--PN 179 (573)
Q Consensus 112 I~~~~ldg~~~-~~l~~~------~~~P~~Iavdp~~g~LYwt-d~~-~~~~I~r~~ldG~~~~~l~~~~-~~l~~--P~ 179 (573)
|.+.++.+... ..+... ......+++.|...+|+.+ +.+ ....|+..++++.....+.... ..... +.
T Consensus 230 l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 309 (723)
T 1xfd_A 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNE 309 (723)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCC
T ss_pred EEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCC
Confidence 77777776553 333221 2235678999976666443 322 2356888888766554443101 11111 24
Q ss_pred eEEEeccCCeEEEE-eCCCC------eEEEEe-CCCCc---EEEEEeCCccceeEEEee--eCCeEEEecC----CCCce
Q psy952 180 ALTLDYFTERLYWA-DAHLD------YIASVD-LDGKH---KHIVISGQKVPHVFALTL--FEDHIYWTDW----NTKSI 242 (573)
Q Consensus 180 glaiD~~~~~LYw~-D~~~~------~I~~~~-~dG~~---~~~l~~~~~~~~p~~ia~--~~~~lywtd~----~~~~I 242 (573)
.+++.+++.+|+++ ....+ .|+.++ .++.. .+.+..+. ......+++ ++..||++-. ....|
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 388 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-WDVTKILAYDEKGNKIYFLSTEDLPRRRQL 388 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-SCEEEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred CceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC-eEEEeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence 78899888888886 43333 688888 56655 44443322 122222344 5678877643 33457
Q ss_pred EEEec
Q psy952 243 NRADK 247 (573)
Q Consensus 243 ~~~~~ 247 (573)
++++.
T Consensus 389 ~~~~~ 393 (723)
T 1xfd_A 389 YSANT 393 (723)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 77764
No 225
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.98 E-value=0.00042 Score=70.40 Aligned_cols=188 Identities=6% Similarity=0.047 Sum_probs=116.4
Q ss_pred cccEEEEEcCCCceeecccCCcceEEEEEEc-CCCEEEEEECCC-----CeEEEEEcCCCcceEEEcCC-CCCcceeEEe
Q psy952 24 KYYVRNMSLDATQYSLVHQDLLNVVAMDFHY-KENRFYFADVAA-----KTIYRSRVGSTEKERVIRHD-SHGLEGLAVD 96 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~-~~~~ly~~d~~~-----~~I~~~~~~g~~~~~i~~~~-~~~p~glavD 96 (573)
...|+.+++.+.....+......+..++|.+ .+++|+++.... ..|+.+++++.....+.... ...+..+++.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEEC
T ss_pred cceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEEC
Confidence 3478888988766555544445577889988 566677765332 47999999876655444321 2246667888
Q ss_pred ecCCcEEEEeC--CCCe--EEEEEcCCCceeEeccCCCCcceEEEeC-CCceEEEEec--------------CCcCeEEE
Q psy952 97 WVGRKLYWLDR--HSKQ--LDVAELDGTNRKTLKTAIQDPRGITLHP-GIGYVYFSSW--------------NLQAYIGK 157 (573)
Q Consensus 97 ~~~~~LY~td~--~~~~--I~~~~ldg~~~~~l~~~~~~P~~Iavdp-~~g~LYwtd~--------------~~~~~I~r 157 (573)
+.++.|+++.. .... |.+.++.+...+.+... ... .+++.| ...+|+++.. .....|++
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-PPC-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-CSE-EEEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-CCC-CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 87887877642 2334 99999876655444321 111 277887 5555554321 12367999
Q ss_pred EeccCCCcEEEEecCCCCC----------CCceEEEeccCCeEEEEeCC--CCeEEEEeCCCCcEEEEEe
Q psy952 158 IGMDGSNFTRILTHEDDIA----------WPNALTLDYFTERLYWADAH--LDYIASVDLDGKHKHIVIS 215 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~~~l~----------~P~glaiD~~~~~LYw~D~~--~~~I~~~~~dG~~~~~l~~ 215 (573)
.++++...+.+.. .... .+..+++.+++.+|+++... ...|+.+++++...+++..
T Consensus 325 ~d~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 325 LNTKAKSAQKLCK--HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLEHH 392 (396)
T ss_dssp EETTTTBCCEEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-----
T ss_pred EecccCceEEccC--CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccccc
Confidence 9988766555552 2221 14557888888889888653 3468899988877766654
No 226
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.98 E-value=0.0013 Score=67.31 Aligned_cols=211 Identities=8% Similarity=-0.063 Sum_probs=131.3
Q ss_pred CEEEEEe-cccEEEEEcCCCc--------eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE--cC
Q psy952 17 PWLIFSN-KYYVRNMSLDATQ--------YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI--RH 85 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~--------~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~--~~ 85 (573)
.+|+.+. ...|+..++.... ...+......+..|+|.+....++++-...+.|..+++........+ ..
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 174 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV 174 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC
Confidence 4555444 4678888886542 12222334568899999877666666667788999998765444344 33
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eEe-ccC-CCCcceEEEeCCCceEEEEec-CCcCeEEEEecc
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KTL-KTA-IQDPRGITLHPGIGYVYFSSW-NLQAYIGKIGMD 161 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l-~~~-~~~P~~Iavdp~~g~LYwtd~-~~~~~I~r~~ld 161 (573)
....+..|++.+.++.|+.+. ..+.|.+.++..... ..+ ... ...+..+++.|...+|+.... +....|...++.
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 345778899987555555554 568899999875443 333 222 223789999996444444311 235677777776
Q ss_pred CCCc--EEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCc--EEEEEeCCccceeEEEeeeCC
Q psy952 162 GSNF--TRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH--KHIVISGQKVPHVFALTLFED 230 (573)
Q Consensus 162 G~~~--~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~--~~~l~~~~~~~~p~~ia~~~~ 230 (573)
.... .... .........+++++.+..||++-...+.|...++.... ...+..........+|++..+
T Consensus 254 ~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~ 324 (402)
T 2aq5_A 254 HLEEPLSLQE--LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK 324 (402)
T ss_dssp BCSSCSEEEE--CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG
T ss_pred cccCCceEEe--ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc
Confidence 5432 2222 23344567899999999999988778888888887655 444432111234567776443
No 227
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.95 E-value=0.022 Score=58.06 Aligned_cols=247 Identities=10% Similarity=0.053 Sum_probs=137.2
Q ss_pred CceeeCCCCCCEEEEEecccEEEEEcCCCceeecccC-------------------CcceEEEEEEcCCCEEEEEECCCC
Q psy952 7 STCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQD-------------------LLNVVAMDFHYKENRFYFADVAAK 67 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~-------------------~~~~~~v~~d~~~~~ly~~d~~~~ 67 (573)
.+|.+......+|+.+....|+..++........+.. ...+..|+|.+.+..|+. -...+
T Consensus 67 V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s-~~~d~ 145 (393)
T 1erj_A 67 VCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT-GAEDR 145 (393)
T ss_dssp CCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE-EETTS
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE-EcCCC
Confidence 3455544334566665566777777654332211111 113678999986655554 44567
Q ss_pred eEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEE
Q psy952 68 TIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFS 147 (573)
Q Consensus 68 ~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwt 147 (573)
.|+.+++........+......+..|++.+.++.|+ +-...+.|.+.++........+........+++.|..+.++.+
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 224 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEE
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEE
Confidence 899999876554444444445678888887666554 4456788999898765544333444457889999866665555
Q ss_pred ecCCcCeEEEEeccCCCcEEEEec-----CCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcE------------
Q psy952 148 SWNLQAYIGKIGMDGSNFTRILTH-----EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHK------------ 210 (573)
Q Consensus 148 d~~~~~~I~r~~ldG~~~~~l~~~-----~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~------------ 210 (573)
-. ....|...++........+.. ...-.....|++.+.+..|+.+ ...+.|...++.....
T Consensus 225 ~s-~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~~~~~~~~~~~~~~~~ 302 (393)
T 1erj_A 225 GS-LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQNANNKSDSKTPNSGTC 302 (393)
T ss_dssp EE-TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC---------------CE
T ss_pred Ec-CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCCCCCcccccCCCCCcc
Confidence 42 345566666654332221100 0112234678888766555544 4566777777653211
Q ss_pred EEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 211 HIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 211 ~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
.....+. .....++++. ++.++++-...+.|..-+..+++...++..
T Consensus 303 ~~~~~~h-~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~ 350 (393)
T 1erj_A 303 EVTYIGH-KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG 350 (393)
T ss_dssp EEEEECC-SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEecc-cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 1111121 2234566663 344445555567777777777766555543
No 228
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.93 E-value=0.0058 Score=68.27 Aligned_cols=223 Identities=12% Similarity=0.087 Sum_probs=133.0
Q ss_pred ccEEEEEcC---CCceeeccc------CC-cceEEEEEEcCCCEEEEEECCC----CeEEEEEcCCCcceEEEcCCCCCc
Q psy952 25 YYVRNMSLD---ATQYSLVHQ------DL-LNVVAMDFHYKENRFYFADVAA----KTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 25 ~~I~~i~l~---g~~~~~~~~------~~-~~~~~v~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
..|++++.. +.....++. .. ....+++|.+.+++|.++-... ..|+.++++++........+. ..
T Consensus 133 ~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-~~ 211 (741)
T 1yr2_A 133 SQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-KF 211 (741)
T ss_dssp CEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-ES
T ss_pred EEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-ee
Confidence 457888876 554444321 11 1466889999888887764332 369999998765433221111 12
Q ss_pred ceeEEeecCCcEEEEeCC-------------CCeEEEEEcCCCce--eEeccCCCC---cceEEEeCCCceEEEEecC--
Q psy952 91 EGLAVDWVGRKLYWLDRH-------------SKQLDVAELDGTNR--KTLKTAIQD---PRGITLHPGIGYVYFSSWN-- 150 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~-------------~~~I~~~~ldg~~~--~~l~~~~~~---P~~Iavdp~~g~LYwtd~~-- 150 (573)
.++++.+. +.||++... ..+|++.++.+... +.+...... ..+++++|...+|+++...
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 45666656 778887532 23588888865442 233333222 4588899988788877643
Q ss_pred -CcCeEEEEeccCC--C-cEEEEecCCCCCCCceEEEeccCCeEEEEeCC---CCeEEEEeCCCC--cEEEEEeCCccce
Q psy952 151 -LQAYIGKIGMDGS--N-FTRILTHEDDIAWPNALTLDYFTERLYWADAH---LDYIASVDLDGK--HKHIVISGQKVPH 221 (573)
Q Consensus 151 -~~~~I~r~~ldG~--~-~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~---~~~I~~~~~dG~--~~~~l~~~~~~~~ 221 (573)
....|+..++++. . .+.|. .....-... +.+.+++||+.... ..+|+.+++++. ..+.++... ...
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~---~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~ 365 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALI---PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES-KDN 365 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEE---CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-SSE
T ss_pred CCcceEEEEECCCCCCcccEEec---CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-CCe
Confidence 2458999998776 4 45555 222111222 34678899887542 457999999873 445555432 233
Q ss_pred eEEEeeeCCeEEEecCCC--CceEEEeccCCcceEE
Q psy952 222 VFALTLFEDHIYWTDWNT--KSINRADKFNGRDYRV 255 (573)
Q Consensus 222 p~~ia~~~~~lywtd~~~--~~I~~~~~~~g~~~~~ 255 (573)
..++++.+++|+++-... .+|+.++. +|+..+.
T Consensus 366 l~~~~~~~~~lv~~~~~dg~~~l~~~~~-~g~~~~~ 400 (741)
T 1yr2_A 366 LESVGIAGNRLFASYIHDAKSQVLAFDL-DGKPAGA 400 (741)
T ss_dssp EEEEEEEBTEEEEEEEETTEEEEEEEET-TSCEEEE
T ss_pred EEEEEEECCEEEEEEEECCEEEEEEEeC-CCCceee
Confidence 457777888888875443 35666663 4543333
No 229
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.85 E-value=0.026 Score=55.03 Aligned_cols=245 Identities=9% Similarity=0.026 Sum_probs=142.8
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCceee-cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSL-VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR 84 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~-~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~ 84 (573)
.++.+......+|+.+. ...|+..++....... +......+..|+|.+..+.|+.+ ...+.|..+++........+.
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~ 104 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLK 104 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcEEEEEc
Confidence 34444433334555544 4678888876544433 32334457899999866555544 456789999987654433343
Q ss_pred CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCC
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS 163 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~ 163 (573)
.....+..+++.+.++.|+ +-...+.|.+.++.... ...+.........|+++|...+|+... ....|...++...
T Consensus 105 ~~~~~v~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~ 181 (312)
T 4ery_A 105 GHSNYVFCCNFNPQSNLIV-SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASG 181 (312)
T ss_dssp CCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTC
T ss_pred CCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCC
Confidence 3345677888887655554 44456789999987543 333434444578899999666665554 3456777776543
Q ss_pred Cc-EEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCc-cce--eEEEeeeCCeEEEecCCC
Q psy952 164 NF-TRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQK-VPH--VFALTLFEDHIYWTDWNT 239 (573)
Q Consensus 164 ~~-~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~-~~~--p~~ia~~~~~lywtd~~~ 239 (573)
.. ..+. .........+++++.+..|+.+ ...+.|...++..........+.. ... .......++.++++-...
T Consensus 182 ~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 182 QCLKTLI--DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp CEEEEEC--CSSCCCEEEEEECTTSSEEEEE-ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT
T ss_pred ceeeEEe--ccCCCceEEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC
Confidence 32 2222 2222233568888766666554 456788888887554433333210 011 112222455666666667
Q ss_pred CceEEEeccCCcceEEEcc
Q psy952 240 KSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 240 ~~I~~~~~~~g~~~~~l~~ 258 (573)
+.|...+..+++....+..
T Consensus 259 g~i~vwd~~~~~~~~~~~~ 277 (312)
T 4ery_A 259 NLVYIWNLQTKEIVQKLQG 277 (312)
T ss_dssp SCEEEEETTTCCEEEEECC
T ss_pred CEEEEEECCCchhhhhhhc
Confidence 7787777766665555543
No 230
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.85 E-value=0.014 Score=59.45 Aligned_cols=226 Identities=11% Similarity=0.045 Sum_probs=133.7
Q ss_pred EEEEEe-cccEEEEEcCCCceeecc-cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEE
Q psy952 18 WLIFSN-KYYVRNMSLDATQYSLVH-QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAV 95 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~~~~-~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glav 95 (573)
+|+.+. ...|+..++......... .....+..|+|.+....|+ +-...+.|+.+++........+......+..|++
T Consensus 111 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 189 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAI 189 (420)
T ss_dssp EEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCCCEEEECCSSCEEEEEE
T ss_pred EEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEE
Confidence 444443 467888888765544333 3445688999998666555 4456678999998755443334333467888999
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCCcee-Eecc---CC---------------------CCcceEEEeCCCceEEEEecC
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGTNRK-TLKT---AI---------------------QDPRGITLHPGIGYVYFSSWN 150 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~~~~-~l~~---~~---------------------~~P~~Iavdp~~g~LYwtd~~ 150 (573)
.+.++.|+ +-...+.|.+.++...... .+.. .. .....++++|...+|+...
T Consensus 190 ~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-- 266 (420)
T 3vl1_A 190 IDRGRNVL-SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-- 266 (420)
T ss_dssp ETTTTEEE-EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE--
T ss_pred cCCCCEEE-EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc--
Confidence 87665555 4445678988888644332 2221 11 2234455567555555544
Q ss_pred CcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCc--EEEEEeCCccceeEEEeee
Q psy952 151 LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH--KHIVISGQKVPHVFALTLF 228 (573)
Q Consensus 151 ~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~--~~~l~~~~~~~~p~~ia~~ 228 (573)
..+.|...++........+. ...-.....|++.+.+..++++-...+.|...++.... ...+.... -.....+...
T Consensus 267 ~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~~ 344 (420)
T 3vl1_A 267 VSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE-GTPINNVYFA 344 (420)
T ss_dssp TTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST-TSCEEEEEEE
T ss_pred CCCeEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC-CCCceEEEeC
Confidence 35567777776544333331 12233457899987777455555567889998987543 33443322 2234555556
Q ss_pred CCeEEEecCCCCceEEEeccC
Q psy952 229 EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 229 ~~~lywtd~~~~~I~~~~~~~ 249 (573)
.+.++++-...+.|...+..+
T Consensus 345 ~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 345 AGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TTEEEEEETTTEEEEEEEECC
T ss_pred CCCEEEEecCCccEEEEeccC
Confidence 677777766666666555333
No 231
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.013 Score=56.65 Aligned_cols=229 Identities=11% Similarity=0.005 Sum_probs=130.5
Q ss_pred CEEEEEe-cccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc---ceEEEcCCCCCcc
Q psy952 17 PWLIFSN-KYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE---KERVIRHDSHGLE 91 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~~i~~~~~~~p~ 91 (573)
.+|+.+. ...|+..++...... .+......+..|+|.+....|+.+. ..+.|..+++.... ....+......+.
T Consensus 30 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~ 108 (313)
T 3odt_A 30 SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGEDPLYTLIGHQGNVC 108 (313)
T ss_dssp TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSCC-CEECCCSSCEE
T ss_pred CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCCcccchhhcccCEE
Confidence 3455444 466888888665433 3333455688999998776666655 45678777765432 1112222334566
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeC-CCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHP-GIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp-~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
.|+++ ++ ++++-...+.|.+.+ .+.....+.........+++.| ...+|+... ....|...+. +.....+.
T Consensus 109 ~~~~~--~~-~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~i~d~-~~~~~~~~- 180 (313)
T 3odt_A 109 SLSFQ--DG-VVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTAS--ADKTIKLWQN-DKVIKTFS- 180 (313)
T ss_dssp EEEEE--TT-EEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEE--TTSCEEEEET-TEEEEEEC-
T ss_pred EEEec--CC-EEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEE--CCCCEEEEec-CceEEEEe-
Confidence 66663 44 445555677888888 4444444444555677888887 444444443 2455655552 21122221
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g 250 (573)
...-.....+++.+. ++ +++-...+.|...++........+... ......|++..+..+++-...+.|...+..++
T Consensus 181 -~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 181 -GIHNDVVRHLAVVDD-GH-FISCSNDGLIKLVDMHTGDVLRTYEGH-ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp -SSCSSCEEEEEEEET-TE-EEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSCEEEEETTSEEEEECTTTC
T ss_pred -ccCcccEEEEEEcCC-Ce-EEEccCCCeEEEEECCchhhhhhhhcC-CceEEEEEEecCCCEEEEecCCEEEEEECCCC
Confidence 113344567888754 44 445556778888888754443333332 34567888754433445556677887777777
Q ss_pred cceEEEcc
Q psy952 251 RDYRVLRN 258 (573)
Q Consensus 251 ~~~~~l~~ 258 (573)
+....+..
T Consensus 257 ~~~~~~~~ 264 (313)
T 3odt_A 257 SLKQVITL 264 (313)
T ss_dssp CEEEEEEC
T ss_pred ceeEEEec
Confidence 66655543
No 232
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.83 E-value=0.0064 Score=60.74 Aligned_cols=206 Identities=10% Similarity=-0.038 Sum_probs=122.7
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc--ceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE--KERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR 122 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~ 122 (573)
..+..|+|.+..+.|+.+ ...+.|+.+++++.. ....+......+..|++.+.++.|+.+. ..+.|.+.++.....
T Consensus 9 ~~i~~~~~s~~~~~l~~~-~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAIC-PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTW 86 (372)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCee
Confidence 446788999766555544 456788888887664 2222333345788999988655555544 567898888865542
Q ss_pred e-Ee--ccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE---EEEecCCCCCCCceEEEeccCCeEEEEeCC
Q psy952 123 K-TL--KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT---RILTHEDDIAWPNALTLDYFTERLYWADAH 196 (573)
Q Consensus 123 ~-~l--~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~---~l~~~~~~l~~P~glaiD~~~~~LYw~D~~ 196 (573)
. .+ ......+..|+++|...+|+.... ...|...+++..... ..+. ...-.....|++.+.+..|+.+ ..
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~-~~ 162 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGSG--SRVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVLLAAG-SC 162 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEET--TSSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSEEEEE-ET
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeC--CCEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCEEEEE-cC
Confidence 2 22 234456889999997777776663 455655555544421 1110 1223445788998766555554 45
Q ss_pred CCeEEEEeCC-------------------CCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 197 LDYIASVDLD-------------------GKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 197 ~~~I~~~~~d-------------------G~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
.+.|...++. +.....+ ... ......|++. ++.++++-...+.|...+..+++....+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEec-CCC-CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 6777777753 2222222 121 2346677773 3445555456677888887777766655
Q ss_pred cc
Q psy952 257 RN 258 (573)
Q Consensus 257 ~~ 258 (573)
..
T Consensus 241 ~~ 242 (372)
T 1k8k_C 241 AS 242 (372)
T ss_dssp EC
T ss_pred cc
Confidence 44
No 233
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.82 E-value=0.016 Score=59.13 Aligned_cols=225 Identities=12% Similarity=0.024 Sum_probs=128.2
Q ss_pred ecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcE
Q psy952 23 NKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKL 102 (573)
Q Consensus 23 ~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~L 102 (573)
....|+..++............ .+..+.+-...+.++++-...+.|..+++.......++......+..|++.+.++.|
T Consensus 76 ~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 76 LDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp ETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred cCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence 3557777777654332222222 344443333455555555567789888887655444443444678889998765545
Q ss_pred EEEeCCCCeEEEEEcCC-CceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecC-CC------
Q psy952 103 YWLDRHSKQLDVAELDG-TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE-DD------ 174 (573)
Q Consensus 103 Y~td~~~~~I~~~~ldg-~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~-~~------ 174 (573)
+ +-...+.|.+.++.. .....+.........|+++|...+|+... ....|...++........+... ..
T Consensus 155 ~-s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~ 231 (420)
T 3vl1_A 155 I-SSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS--LDGTIRLWECGTGTTIHTFNRKENPHDGVNS 231 (420)
T ss_dssp E-EEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE--TTSCEEEEETTTTEEEEEECBTTBTTCCEEE
T ss_pred E-EEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc--CCCcEEEeECCCCceeEEeecCCCCCCCccE
Confidence 4 445677899999864 44444544556688999999766666554 2455666665533322222100 00
Q ss_pred ---------------CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeC-Ce-EEEecC
Q psy952 175 ---------------IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE-DH-IYWTDW 237 (573)
Q Consensus 175 ---------------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~-~~-lywtd~ 237 (573)
......+++++.+..| ++-...+.|...++...................|++.. +. ++++-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~ 310 (420)
T 3vl1_A 232 IALFVGTDRQLHEISTSKKNNLEFGTYGKYV-IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY 310 (420)
T ss_dssp EEEEECCCSSCGGGCCCCCCTTCSSCTTEEE-EEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE
T ss_pred EEEecCCcceeeecccCcccceEEcCCCCEE-EEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe
Confidence 1222345555544444 44445677888888655543333322134567777743 33 666655
Q ss_pred CCCceEEEeccCCcc
Q psy952 238 NTKSINRADKFNGRD 252 (573)
Q Consensus 238 ~~~~I~~~~~~~g~~ 252 (573)
..+.|...+..++..
T Consensus 311 ~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 311 ENGMLAQWDLRSPEC 325 (420)
T ss_dssp TTSEEEEEETTCTTS
T ss_pred CCCeEEEEEcCCCcC
Confidence 667888777666643
No 234
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.82 E-value=0.0056 Score=67.84 Aligned_cols=229 Identities=8% Similarity=0.047 Sum_probs=135.5
Q ss_pred CEEEEEec------ccEEEEEcCCCceeecccCC-------cceEEEEEEcCCCEEEEEECCC----CeEEEEEcCCCcc
Q psy952 17 PWLIFSNK------YYVRNMSLDATQYSLVHQDL-------LNVVAMDFHYKENRFYFADVAA----KTIYRSRVGSTEK 79 (573)
Q Consensus 17 ~~l~~s~~------~~I~~i~l~g~~~~~~~~~~-------~~~~~v~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~ 79 (573)
.+++|... ..|++++..+...+.+...- ..+.+++|.+.+++|.++-... ..|+.++++++..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~ 159 (695)
T 2bkl_A 80 GRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW 159 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB
T ss_pred CEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC
Confidence 35555542 35788888766555443211 1467899999888877664322 5799999987653
Q ss_pred eEEEcCCCCCc--ceeEEeecCCcEEEEeCC------------CCeEEEEEcCCCce--eEeccCC---CCcceEEEeCC
Q psy952 80 ERVIRHDSHGL--EGLAVDWVGRKLYWLDRH------------SKQLDVAELDGTNR--KTLKTAI---QDPRGITLHPG 140 (573)
Q Consensus 80 ~~i~~~~~~~p--~glavD~~~~~LY~td~~------------~~~I~~~~ldg~~~--~~l~~~~---~~P~~Iavdp~ 140 (573)
.. ...+... .++++.+.++.||++... ...|++.++.+... +.+.... ....+++++|.
T Consensus 160 ~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD 237 (695)
T 2bkl_A 160 SK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD 237 (695)
T ss_dssp CS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT
T ss_pred cC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC
Confidence 20 1111222 567777777788888642 23499999886553 2333322 23458899998
Q ss_pred CceEEEEecCC--cCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeC---CCCeEEEEeCCCCcE---EE
Q psy952 141 IGYVYFSSWNL--QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADA---HLDYIASVDLDGKHK---HI 212 (573)
Q Consensus 141 ~g~LYwtd~~~--~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~---~~~~I~~~~~dG~~~---~~ 212 (573)
..+|+++.... ...|+..+..+...+.|.. . ........ .+.++ ||+... ...+|+++++++... +.
T Consensus 238 G~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~--~-~~~~~~~~-~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 238 GKYLFVYILRGWSENDVYWKRPGEKDFRLLVK--G-VGAKYEVH-AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp SCCEEEEEEETTTEEEEEEECTTCSSCEEEEE--C-SSCCEEEE-EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred CCEEEEEEeCCCCceEEEEEcCCCCceEEeec--C-CCceEEEE-ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 88888876432 3478777765545555552 1 11122222 24455 777643 357899999976552 44
Q ss_pred EEeCCccceeEEEeeeCCeEEEecCCC--CceEEEeccCCcce
Q psy952 213 VISGQKVPHVFALTLFEDHIYWTDWNT--KSINRADKFNGRDY 253 (573)
Q Consensus 213 l~~~~~~~~p~~ia~~~~~lywtd~~~--~~I~~~~~~~g~~~ 253 (573)
++....-....++++.+++|+++-... .+|+.++. +|+..
T Consensus 313 l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~-~g~~~ 354 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATL-KGKPV 354 (695)
T ss_dssp EECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEET-TCCEE
T ss_pred EecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC-CCCee
Confidence 443211223566777888888875443 34566653 44433
No 235
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.79 E-value=0.0082 Score=66.61 Aligned_cols=221 Identities=12% Similarity=0.094 Sum_probs=131.6
Q ss_pred cEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCC---------------CeEEEEEcCCCcce-EEEcCCC--
Q psy952 26 YVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAA---------------KTIYRSRVGSTEKE-RVIRHDS-- 87 (573)
Q Consensus 26 ~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~---------------~~I~~~~~~g~~~~-~i~~~~~-- 87 (573)
.|+.+++.+............+.+++|.+.++.||++.... ..|++.++.+...+ .++...-
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~ 231 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE 231 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC
Confidence 78999998765432211111245789999889999986532 35999999765432 2332221
Q ss_pred -CCcceeEEeecCCcEEEEeC-C---CCeEEEEEcCC------C--ceeEeccCCCCcceEEEeCCCceEEEEecC--Cc
Q psy952 88 -HGLEGLAVDWVGRKLYWLDR-H---SKQLDVAELDG------T--NRKTLKTAIQDPRGITLHPGIGYVYFSSWN--LQ 152 (573)
Q Consensus 88 -~~p~glavD~~~~~LY~td~-~---~~~I~~~~ldg------~--~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~--~~ 152 (573)
....++++.+.++.|+++-. . ...|++.++++ . ..+.|...... ..-.+++..+.||+.... ..
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTT
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCC
Confidence 23457888888888888653 2 46899999875 3 23444433222 223467767888877532 24
Q ss_pred CeEEEEeccCCC---cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC--eEEEEeC-CCCcEEEEEeCCccceeEEEe
Q psy952 153 AYIGKIGMDGSN---FTRILTHEDDIAWPNALTLDYFTERLYWADAHLD--YIASVDL-DGKHKHIVISGQKVPHVFALT 226 (573)
Q Consensus 153 ~~I~r~~ldG~~---~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~--~I~~~~~-dG~~~~~l~~~~~~~~p~~ia 226 (573)
.+|++.++++.. .+.++. ...-....++++. .+++|+++-...+ +|+.+++ +|...+.|... .....+++
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~--~~~v~~~~ 386 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVP-EHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE--VGSVVGYS 386 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEEC-CCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC--SSEEEEEE
T ss_pred CEEEEEeCCCCCcccceeccC-CCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC--CceEEEEe
Confidence 589999998764 255652 1111133466665 4677877754443 6888888 66644444322 23455565
Q ss_pred e--eCCeEEEe--cC-CCCceEEEeccCCc
Q psy952 227 L--FEDHIYWT--DW-NTKSINRADKFNGR 251 (573)
Q Consensus 227 ~--~~~~lywt--d~-~~~~I~~~~~~~g~ 251 (573)
+ .++.|+++ .. .-.+|+..+..+|+
T Consensus 387 ~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 387 GQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred cCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5 34456654 22 34578888876665
No 236
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.78 E-value=0.0085 Score=67.15 Aligned_cols=208 Identities=11% Similarity=0.016 Sum_probs=131.0
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-e
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-R 122 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~ 122 (573)
...+.+|+|++.+..|..+. ..+.|..+++........+...-..+..+++.+.++.|..+. ..+.|.+.++.... .
T Consensus 13 ~~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTGEKV 90 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTCCEE
T ss_pred CCceEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCcEE
Confidence 34588999999777777665 567888889865544333333345788999998777776665 46889999986544 3
Q ss_pred eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC-cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEE
Q psy952 123 KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN-FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIA 201 (573)
Q Consensus 123 ~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~-~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~ 201 (573)
..+.........|+++|...+|+... ....|...+++... ....+ ...-.....+++.+.++.++++-...+.|.
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTF--EGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEE--TTSEEEEEEGGGTSEEEEEE--ECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEecCCCCEEEEEEeCCCCEEEEEc--CCCEEEEEECCCCceEEEEE--cCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 34444556689999999777777655 35677777776542 22233 233344578888874566666666678888
Q ss_pred EEeCCCCcEEEEEeCCccceeEEEeee---CCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 202 SVDLDGKHKHIVISGQKVPHVFALTLF---EDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 202 ~~~~dG~~~~~l~~~~~~~~p~~ia~~---~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
..++...................+++. ++.++++-...+.|...+..+++....+.
T Consensus 167 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc
Confidence 888865443333322212334455553 44455555556677766665555444443
No 237
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.73 E-value=0.0016 Score=72.13 Aligned_cols=189 Identities=12% Similarity=0.022 Sum_probs=113.2
Q ss_pred EEEEEecccEEEEEcCCCceeecccC-Cc------------------ceEEEEEEcCCCEEEEEECCC------------
Q psy952 18 WLIFSNKYYVRNMSLDATQYSLVHQD-LL------------------NVVAMDFHYKENRFYFADVAA------------ 66 (573)
Q Consensus 18 ~l~~s~~~~I~~i~l~g~~~~~~~~~-~~------------------~~~~v~~d~~~~~ly~~d~~~------------ 66 (573)
.|+++..+.|+.+++.+.....+... .. .+.+++|.+.++.|+++....
T Consensus 127 ~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 127 QLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp CEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC
Confidence 67777778899999987654433222 11 236899999988888875321
Q ss_pred ---------------------CeEEEEEcCCCcceEEEcCC------CCCcceeEEeecCCcEEE-EeCC--CCeEEEEE
Q psy952 67 ---------------------KTIYRSRVGSTEKERVIRHD------SHGLEGLAVDWVGRKLYW-LDRH--SKQLDVAE 116 (573)
Q Consensus 67 ---------------------~~I~~~~~~g~~~~~i~~~~------~~~p~glavD~~~~~LY~-td~~--~~~I~~~~ 116 (573)
..|+.+++.+......+... ...+..+++.+.++.|+. ++.. ...|.+.+
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 16777777665432222211 123455777776666633 3432 24688888
Q ss_pred cCCCceeEecc----CCCC--cceEEEeCCCceEEEE-ecCC-----cCeEEEEe-ccCCC---cEEEEecCCCCCCCce
Q psy952 117 LDGTNRKTLKT----AIQD--PRGITLHPGIGYVYFS-SWNL-----QAYIGKIG-MDGSN---FTRILTHEDDIAWPNA 180 (573)
Q Consensus 117 ldg~~~~~l~~----~~~~--P~~Iavdp~~g~LYwt-d~~~-----~~~I~r~~-ldG~~---~~~l~~~~~~l~~P~g 180 (573)
+.+.....+.. .... +..+++.|....|+++ .... ..+|+..+ .++.. .+.+. .........
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~~ 364 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--SGDWDVTKI 364 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--CSSSCEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--cCCeEEEee
Confidence 87655444432 1111 3588999988888876 3221 23688887 55554 33333 112211223
Q ss_pred EEEeccCCeEEEEeCC----CCeEEEEeCCCC
Q psy952 181 LTLDYFTERLYWADAH----LDYIASVDLDGK 208 (573)
Q Consensus 181 laiD~~~~~LYw~D~~----~~~I~~~~~dG~ 208 (573)
+++++++++||++... ...|++++.+|.
T Consensus 365 ~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 365 LAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp EEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred eEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 6899999999887543 356888888875
No 238
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.014 Score=58.31 Aligned_cols=240 Identities=7% Similarity=-0.013 Sum_probs=129.6
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCcee---ecccCCcceEEEEEEcC-CCEEEEEECCCCeEEEEEcCCCc--c
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYS---LVHQDLLNVVAMDFHYK-ENRFYFADVAAKTIYRSRVGSTE--K 79 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~---~~~~~~~~~~~v~~d~~-~~~ly~~d~~~~~I~~~~~~g~~--~ 79 (573)
.+|.+......+|+.+. ...|+..++.+.... .+......+..|+|.+. .+.++++-...+.|..+++.... .
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 93 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeE
Confidence 34444433345666654 567888888643222 22223455789999755 13444444456778888887654 2
Q ss_pred eEEEcCCCCCcceeEEeecC-CcEEEEeCCCCeEEEEEcCCCce---eEeccCCCCcceEEEeCC------------Cce
Q psy952 80 ERVIRHDSHGLEGLAVDWVG-RKLYWLDRHSKQLDVAELDGTNR---KTLKTAIQDPRGITLHPG------------IGY 143 (573)
Q Consensus 80 ~~i~~~~~~~p~glavD~~~-~~LY~td~~~~~I~~~~ldg~~~---~~l~~~~~~P~~Iavdp~------------~g~ 143 (573)
...+......+..|++.+.. +.++++-...+.|.+.++..... ..+.........|+++|. .+.
T Consensus 94 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T 3jrp_A 94 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR 173 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTC
T ss_pred eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCC
Confidence 22233234578888888762 34444445678899999876522 222244455788999984 344
Q ss_pred EEEEecCCcCeEEEEeccCCCcE-EEE-ecCCCCCCCceEEEeccC--CeEEEEeCCCCeEEEEeCCCCc---EEEEEeC
Q psy952 144 VYFSSWNLQAYIGKIGMDGSNFT-RIL-THEDDIAWPNALTLDYFT--ERLYWADAHLDYIASVDLDGKH---KHIVISG 216 (573)
Q Consensus 144 LYwtd~~~~~~I~r~~ldG~~~~-~l~-~~~~~l~~P~glaiD~~~--~~LYw~D~~~~~I~~~~~dG~~---~~~l~~~ 216 (573)
++++-. ....|...++...... .++ .....-.....|++.+.. +.++++-...+.|...++.... ...+...
T Consensus 174 ~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 252 (379)
T 3jrp_A 174 KFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE 252 (379)
T ss_dssp EEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSS
T ss_pred EEEEEe-CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecc
Confidence 444432 2455666666533322 221 102223345689998773 5555555566777777776542 2222221
Q ss_pred -CccceeEEEeee--CCeEEEecCCCCceEEEecc
Q psy952 217 -QKVPHVFALTLF--EDHIYWTDWNTKSINRADKF 248 (573)
Q Consensus 217 -~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~~ 248 (573)
........+++. +..|+.+. ..+.|...+..
T Consensus 253 ~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~ 286 (379)
T 3jrp_A 253 EKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKEN 286 (379)
T ss_dssp SCCSSCEEEEEECSSSCCEEEEE-SSSSEEEEEEE
T ss_pred ccCCCcEEEEEEcCCCCEEEEec-CCCcEEEEeCC
Confidence 112345667763 33454443 35556555433
No 239
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.72 E-value=0.0016 Score=67.55 Aligned_cols=206 Identities=10% Similarity=0.023 Sum_probs=130.9
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC--CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH--DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK 123 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~--~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~ 123 (573)
.+.+|+|++....|..+-...+.|...+++......++.. .-..+.+|++.+..++++++-+..+.|.+.++.+...+
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 4789999998877777777788999999876554444321 23578899998777777778778889999999887766
Q ss_pred Eecc---CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeE
Q psy952 124 TLKT---AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYI 200 (573)
Q Consensus 124 ~l~~---~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 200 (573)
++.. .......++++|...+|+... ..+.|...+++|.....+. ..-.....|++.+.+..++.+-...+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~--~dg~i~~wd~~~~~~~~~~---~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGD--NVGNVILLNMDGKELWNLR---MHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEEC--SSSBEEEEESSSCBCCCSB---CCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEe--CCCcEeeeccCcceeEEEe---cccceEEeeeecCCCceEEEEecCccee
Confidence 6553 223357899999655555443 3567888888876543322 2223346888888777777766666777
Q ss_pred EEEeCCCCc-EEEEEe-CCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 201 ASVDLDGKH-KHIVIS-GQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 201 ~~~~~dG~~-~~~l~~-~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
...++.... ...+.. ........+|++. .+.++++-...+.|...+..++.....+
T Consensus 276 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 276 KIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp CEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred eEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 666664322 111111 1101223556653 3444555555667776666666554443
No 240
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.72 E-value=0.042 Score=53.58 Aligned_cols=207 Identities=12% Similarity=0.052 Sum_probs=124.4
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-ee
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RK 123 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~ 123 (573)
..+.+|+|.+.+..|.-+ ...+.|...++........+......+..+++.+.++.|+ +-...+.|.+.++.... ..
T Consensus 14 ~~V~~~~fsp~~~~l~s~-~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTT-LYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWII-VGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp SCEEEEEECSSSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEE-EEETTSEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCCEEEEE-cCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEE-EECCCCEEEEEECCCCcEEE
Confidence 457899999876665544 4567898889875543323333334567788887655554 44467889999986443 34
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC-cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEE
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN-FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIAS 202 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~-~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~ 202 (573)
.+.........|+++|...+|+-.. ....|..-++.... ....+ ...-.....+++.+.++.++.+-...+.|..
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTF--EGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEE--CCCCSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhh--cccCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 4444555688999999766555443 35567666665432 22233 2333345788888766666666667788888
Q ss_pred EeCCCCcE-EEEEeCCccceeEEEeee---CCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 203 VDLDGKHK-HIVISGQKVPHVFALTLF---EDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 203 ~~~dG~~~-~~l~~~~~~~~p~~ia~~---~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
.++..... ..+..+. ......+++. ++.++++-...+.|..-+..+++....+..
T Consensus 168 wd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 226 (304)
T 2ynn_A 168 WSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (304)
T ss_dssp EETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC
Confidence 88754333 2232221 1223344442 344555655667777777666655555443
No 241
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.71 E-value=0.0066 Score=67.25 Aligned_cols=218 Identities=13% Similarity=0.158 Sum_probs=126.6
Q ss_pred ccEEEEEcCCCceeec-ccCCcceEEEEEEcCCCEEEEEECC------------CCeEEEEEcCCCcc--eEEEcCCC--
Q psy952 25 YYVRNMSLDATQYSLV-HQDLLNVVAMDFHYKENRFYFADVA------------AKTIYRSRVGSTEK--ERVIRHDS-- 87 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~-~~~~~~~~~v~~d~~~~~ly~~d~~------------~~~I~~~~~~g~~~--~~i~~~~~-- 87 (573)
..|+.+++++.+.... +... ...+++|. .++.||++... ...|++.++..... ..|....-
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred EEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 4688888876653221 1111 12456787 78888887644 24699998865432 33333221
Q ss_pred -CCcceeEEeecCCcEEEEeC---CCCeEEEEEcCCC--ceeEeccCCCCcceEEEeCCCceEEEEecCC--cCeEEEEe
Q psy952 88 -HGLEGLAVDWVGRKLYWLDR---HSKQLDVAELDGT--NRKTLKTAIQDPRGITLHPGIGYVYFSSWNL--QAYIGKIG 159 (573)
Q Consensus 88 -~~p~glavD~~~~~LY~td~---~~~~I~~~~ldg~--~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~--~~~I~r~~ 159 (573)
....++++.+.++.|+++-. ....|++.++++. ..+.|......-... +++..+.||+..... ..+|++++
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d 311 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVD 311 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 12346777777888877653 2358999998754 334444332222222 556577777765332 46899999
Q ss_pred ccCCCc---EEEEecCCCCCCCceEEEeccCCeEEEEeCCC--CeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeE
Q psy952 160 MDGSNF---TRILTHEDDIAWPNALTLDYFTERLYWADAHL--DYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHI 232 (573)
Q Consensus 160 ldG~~~---~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~--~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~l 232 (573)
+++... +.|+ ...-.. +.+.+.+++|+++-... .+|+.++++|...+.|.... .....+++. .++.|
T Consensus 312 ~~~~~~~~~~~l~--~~~~~~---~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~-~~~~~~~~~~~d~~~l 385 (693)
T 3iuj_A 312 AANPGPAHWRDLI--PERQQV---LTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPG-LGSVSGFNGKHDDPAL 385 (693)
T ss_dssp TTSCCGGGCEEEE--CCCSSC---EEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSS-SSEEEECCCCTTCSCE
T ss_pred CCCCCccccEEEe--cCCCCE---EEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCC-CceEEeeecCCCCCEE
Confidence 987654 5666 232222 25555688888875444 47899999987766553322 223334443 34556
Q ss_pred EEec--C-CCCceEEEeccCCc
Q psy952 233 YWTD--W-NTKSINRADKFNGR 251 (573)
Q Consensus 233 ywtd--~-~~~~I~~~~~~~g~ 251 (573)
+++- . .-..|+..+..+++
T Consensus 386 ~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 386 YFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEECSSSCCEEEEECTTTCC
T ss_pred EEEecCCCCCCEEEEEECCCCe
Confidence 5542 1 23678888765554
No 242
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.70 E-value=0.012 Score=63.14 Aligned_cols=205 Identities=8% Similarity=-0.065 Sum_probs=126.8
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC----cceEEEcCCCCC-cceeEEee--cCCcEEEEeCCCCeEEEEE
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST----EKERVIRHDSHG-LEGLAVDW--VGRKLYWLDRHSKQLDVAE 116 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~----~~~~i~~~~~~~-p~glavD~--~~~~LY~td~~~~~I~~~~ 116 (573)
...+..|+|++.++.|.++. .+.|..++++.. .....+...-.. +..|++.+ .++.|+.+. ..+.|.+.+
T Consensus 18 ~~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~dg~v~vw~ 94 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-ESGKVIVWG 94 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-TTSEEEEEE
T ss_pred cCceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-CCCEEEEEe
Confidence 34578899999888888877 568888888754 343344433356 88999998 666565554 467888888
Q ss_pred cC-C--------CceeEeccCCCCcceEEEeCCCceEEEEecCCc--CeEEEEeccCCCcEEEEecCCCCCCCceEEEec
Q psy952 117 LD-G--------TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQ--AYIGKIGMDGSNFTRILTHEDDIAWPNALTLDY 185 (573)
Q Consensus 117 ld-g--------~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~--~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~ 185 (573)
+. + .....+.........|+++|...+|+....... ..|...+ .+... ..+ ...-.....+++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~-~~~--~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSL-GEV--SGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEE-EEC--CSCSSCEEEEEECS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcc-eee--ecCCccEEEEEECC
Confidence 84 2 222223234456889999998777776653221 3444443 22221 122 23334457889987
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccc---eeEEEeee-C-CeEEEecCCCCceEEEeccCCcceEEE
Q psy952 186 FTERLYWADAHLDYIASVDLDGKHKHIVISGQKVP---HVFALTLF-E-DHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 186 ~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~---~p~~ia~~-~-~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
.+..++++-...+.|...++........+... .. ....|++. + +.++++-...+.|...+..+++....+
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred CCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 77656666666788888887654443333332 23 45677774 3 455555445677877776677666555
No 243
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.68 E-value=0.00025 Score=74.96 Aligned_cols=111 Identities=10% Similarity=0.053 Sum_probs=78.9
Q ss_pred CCCCcceeEEeecCCcEEEEeCC---------------------CCeEEEEEcCCCc-------eeEec-c---------
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRH---------------------SKQLDVAELDGTN-------RKTLK-T--------- 127 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~---------------------~~~I~~~~ldg~~-------~~~l~-~--------- 127 (573)
.+.+|+++++++.++.||++-+. .|.|+++..++.. -..++ .
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 36799999999999999998532 2779998875421 11121 0
Q ss_pred ------------CCCCcceEEEeCCCceEEE-EecCC----------cCeEEEEeccCCCcEEEEecCCCCCCCceEEEe
Q psy952 128 ------------AIQDPRGITLHPGIGYVYF-SSWNL----------QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLD 184 (573)
Q Consensus 128 ------------~~~~P~~Iavdp~~g~LYw-td~~~----------~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD 184 (573)
.+..|.+|++|+ .|.||+ ||.+. ...++++..+....+.++. ......|+||++.
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafS 539 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFS 539 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEEC
T ss_pred cccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEEC
Confidence 256699999999 689999 87531 2378898885444444441 3345679999999
Q ss_pred ccCCeEEEEeCCCC
Q psy952 185 YFTERLYWADAHLD 198 (573)
Q Consensus 185 ~~~~~LYw~D~~~~ 198 (573)
++...||++-.+-+
T Consensus 540 PD~ktLfV~vQHPG 553 (592)
T 4a9v_A 540 PDQKTLFVGIQHPG 553 (592)
T ss_dssp TTSSEEEEEEESTT
T ss_pred CCCCEEEEEEeCCC
Confidence 99999999865544
No 244
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.68 E-value=0.0044 Score=61.66 Aligned_cols=197 Identities=9% Similarity=0.061 Sum_probs=110.1
Q ss_pred cEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECC--------------------------CCeEEEEEcCCCcc
Q psy952 26 YVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVA--------------------------AKTIYRSRVGSTEK 79 (573)
Q Consensus 26 ~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~--------------------------~~~I~~~~~~g~~~ 79 (573)
.|+.+++++.....+..... +.+++|.+.++.|+++... ...|++++++++..
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred eEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 48888988765544433223 7889999888888887532 35799999987655
Q ss_pred -eEEEcCCCCCcceeEEeecCCcEEEEeCC--------CCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecC
Q psy952 80 -ERVIRHDSHGLEGLAVDWVGRKLYWLDRH--------SKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWN 150 (573)
Q Consensus 80 -~~i~~~~~~~p~glavD~~~~~LY~td~~--------~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~ 150 (573)
..+.. . .+..+++.+.+ .+|.+... ...|++++ .|. .+.|... .... .++|...+|+++...
T Consensus 165 ~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~-~~~~--~~spdg~~l~~~~~~ 235 (347)
T 2gop_A 165 IEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK-VSFY--AVDSDGERILLYGKP 235 (347)
T ss_dssp EEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE-ESEE--EEEECSSCEEEEECC
T ss_pred EeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-eEEeccC-ccee--eECCCCCEEEEEEcc
Confidence 44443 2 66677777655 44545332 33677777 443 3444433 2222 337777778776532
Q ss_pred C------cCeEEEEeccCCCcEEEEecCCCCCC-Cce-EEEeccCCeEEEEeCCC--CeEEEEeCCCCcEEEEEeCCccc
Q psy952 151 L------QAYIGKIGMDGSNFTRILTHEDDIAW-PNA-LTLDYFTERLYWADAHL--DYIASVDLDGKHKHIVISGQKVP 220 (573)
Q Consensus 151 ~------~~~I~r~~ldG~~~~~l~~~~~~l~~-P~g-laiD~~~~~LYw~D~~~--~~I~~~~~dG~~~~~l~~~~~~~ 220 (573)
. ...|+..+ .|. .+.+. ..... ... +++. ++ ||++-... .+|+ ++ +|.. +.+... ..
T Consensus 236 ~~~~~~~~~~l~~~d-~~~-~~~l~---~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~-~g~~-~~~~~~--~~ 302 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD-GKE-VMGIL---DEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IW-DGEI-KPIAKG--RH 302 (347)
T ss_dssp SSSCCCSSCEEEEEC-SSC-EEESS---TTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EE-SSSE-EEEECS--SS
T ss_pred ccCCccccceEEEEC-CCc-eEecc---ccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-Ec-CCce-EEEecC--CC
Confidence 1 35788887 443 23332 22222 223 5555 44 66654333 3567 77 6644 334433 23
Q ss_pred eeEEEeeeCCeEEEec--CCC-CceEEEe
Q psy952 221 HVFALTLFEDHIYWTD--WNT-KSINRAD 246 (573)
Q Consensus 221 ~p~~ia~~~~~lywtd--~~~-~~I~~~~ 246 (573)
...++++.. .++++- ... ..|+.++
T Consensus 303 ~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 303 WIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred eEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 556676655 555542 222 2566665
No 245
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.67 E-value=0.021 Score=58.68 Aligned_cols=205 Identities=12% Similarity=0.069 Sum_probs=124.0
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-e
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-K 123 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~ 123 (573)
..+..|+|++... ++++-...+.|..+++........+......+..|++.+. +.++++-...+.|.+.++.+... .
T Consensus 109 ~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 109 SPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS-GKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp SCEEEEEECSSSS-EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT-SSEEEEEETTSCCCEEETTSSCEEE
T ss_pred CcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeE
Confidence 3477999998554 5555556778999998766554445444467888999865 45556656678888888876543 2
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEE
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASV 203 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~ 203 (573)
++.........|+++|...+|+-.. ....|...++........+ ...-.+...+++.+. +.++++-...+.|...
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s--~D~~i~~wd~~~~~~~~~~--~~h~~~v~~~~~~~~-g~~l~s~s~D~~v~vw 261 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSAS--RDKTIKMWEVQTGYCVKTF--TGHREWVRMVRPNQD-GTLIASCSNDQTVRVW 261 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECTT-SSEEEEEETTSCEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEE--eCCCccEEEEEECCC-CCEEEEEcCCCeEEEE
Confidence 3333445678999999665555444 3566777776543332222 233334567777754 4555555566778887
Q ss_pred eCCCCcEEEEEeCCccceeEEEeeeC---------------------CeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 204 DLDGKHKHIVISGQKVPHVFALTLFE---------------------DHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 204 ~~dG~~~~~l~~~~~~~~p~~ia~~~---------------------~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
++........+.+. ......|++.. +.++++-...+.|...+..++.....+.
T Consensus 262 d~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 262 VVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp ETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 87655443333322 22344555432 3455665566677766766665554443
No 246
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.66 E-value=0.051 Score=52.90 Aligned_cols=204 Identities=13% Similarity=0.047 Sum_probs=122.2
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-ee
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RK 123 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~ 123 (573)
..+.+|+|.+.++.|+.+ ...+.|...++........+......+..|++.+.++.|+ +-...+.|.+.++.... ..
T Consensus 24 ~~v~~~~~s~~~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASS-SADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV-SASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp SCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEE
T ss_pred CcEEEEEECCCCCEEEEe-eCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEE-EECCCCEEEEEECCCCcEEE
Confidence 457899999866655544 4566788888765544444444445778899987655554 44456789999987544 33
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEE
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASV 203 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~ 203 (573)
.+.........++++|...+|+... ....|...++........+ ...-.....+++.+.+..|+.+ ...+.|...
T Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~w 176 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSNLIVSGS--FDESVRIWDVKTGKCLKTL--PAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIW 176 (312)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCEEEEEe--cCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEE
Confidence 3434445578899999766666554 3556777777644433333 2222334678888765555544 456778888
Q ss_pred eCCCCcE-EEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 204 DLDGKHK-HIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 204 ~~dG~~~-~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
++..... ..+.... ......+++. .+.++++-...+.|...+..+++....+
T Consensus 177 d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 177 DTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp ETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred ECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 8765443 3332221 2233456653 3444444445567777776666544444
No 247
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.66 E-value=2.8e-05 Score=82.97 Aligned_cols=45 Identities=36% Similarity=0.840 Sum_probs=36.9
Q ss_pred ceecC-CCcccCCCcccCCCCCCCCCCCCCCCccCCcCCCCCCcCCCCCCCccccC
Q psy952 415 EFACR-NGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIP 469 (573)
Q Consensus 415 ~f~C~-~g~ci~~~~~Cd~~~dC~d~sDE~~~~C~~~~C~~~~~~C~~~~~~~c~~ 469 (573)
+|+|. +|+||+..|+|||.+||+|+|||.+ |....+.|. ...++|
T Consensus 70 ~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~-------c~~~~~~C~---~~~~~~ 115 (537)
T 3ojy_B 70 GFVCAQTGRCVNRRLLCNGDNDCGDQSDEAN-------CRRIYKKCQ---HEMDQY 115 (537)
T ss_dssp SEECTTTCCEECGGGTTSSSCCSSSSCTTSS-------CSSCSSCCS---SCCBCC
T ss_pred ccCcCCCCcEeeccccCCCCCCCCCcccccc-------CCCCCCccc---cCcCCC
Confidence 89999 9999999999999999999999976 444456675 334555
No 248
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.65 E-value=0.022 Score=57.35 Aligned_cols=231 Identities=6% Similarity=-0.069 Sum_probs=129.1
Q ss_pred EEEEE-ecccEEEEEcCCCceeecccCCcceEEEEEEcCCC--EEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeE
Q psy952 18 WLIFS-NKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKEN--RFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLA 94 (573)
Q Consensus 18 ~l~~s-~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gla 94 (573)
+|+.+ ....|+..++..............+..+.+.+... .++++-...+.|..+++........+......+..|+
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 34433 35678888888765544444445577888876533 3555556677899999876554444444446788999
Q ss_pred EeecCCcEEEEeCCCCeEEEEEcCCCc--eeEe---------------ccCCCCcceEEEeCCCceEEEEecCCcCeEEE
Q psy952 95 VDWVGRKLYWLDRHSKQLDVAELDGTN--RKTL---------------KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGK 157 (573)
Q Consensus 95 vD~~~~~LY~td~~~~~I~~~~ldg~~--~~~l---------------~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r 157 (573)
+.+.+..|+++-...+.|.+.++.... ...+ .........|+++|...+|+... ....|..
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~v 271 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG--TDNRMRL 271 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE--TTSCEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec--CCCeEEE
Confidence 998888777777777889999886432 1111 11223478899999666666655 3456777
Q ss_pred EeccCCCcEEEEecC--CCCCCCceEEEecc-CCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEE
Q psy952 158 IGMDGSNFTRILTHE--DDIAWPNALTLDYF-TERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIY 233 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~--~~l~~P~glaiD~~-~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~ly 233 (573)
.++............ .....+..+.+... ...+.++ ...+.|...++........+.+. .....+|++. ++.++
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l 349 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV-PYGSTIAVYTVYSGEQITMLKGH-YKTVDCCVFQSNFQEL 349 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE-EETTEEEEEETTTCCEEEEECCC-SSCEEEEEEETTTTEE
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEE-ecCCEEEEEECcCCcceeeeccC-CCeEEEEEEcCCCCEE
Confidence 776543322211000 00111111222212 2222222 33467777777654443333332 3456677774 34555
Q ss_pred EecCCCCceEEEeccCCcc
Q psy952 234 WTDWNTKSINRADKFNGRD 252 (573)
Q Consensus 234 wtd~~~~~I~~~~~~~g~~ 252 (573)
++-...+.|..-+..+++.
T Consensus 350 ~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 350 YSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEETTSCEEEEEECC---
T ss_pred EEECCCCeEEEEeCCCCCc
Confidence 5555566676666555443
No 249
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.65 E-value=0.047 Score=53.21 Aligned_cols=198 Identities=11% Similarity=0.012 Sum_probs=107.0
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCc--eee---cccCCcceEEEEEEcC-CCEEEEEECCCCeEEEEEcCCCc-
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQ--YSL---VHQDLLNVVAMDFHYK-ENRFYFADVAAKTIYRSRVGSTE- 78 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~--~~~---~~~~~~~~~~v~~d~~-~~~ly~~d~~~~~I~~~~~~g~~- 78 (573)
.+|.+......+|+.+. ...|+..++.... ... +......+..|+|.+. ++.++++-...+.|..+++....
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~ 93 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQE 93 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSC
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcc
Confidence 44555443344666555 4578888887432 111 2233456889999875 35555555566788888886542
Q ss_pred --------ceEEEcCCCCCcceeEEeec--CCcEEEEeCCCCeEEEEEcCCCce-eEe--------c-----cCCCCcce
Q psy952 79 --------KERVIRHDSHGLEGLAVDWV--GRKLYWLDRHSKQLDVAELDGTNR-KTL--------K-----TAIQDPRG 134 (573)
Q Consensus 79 --------~~~i~~~~~~~p~glavD~~--~~~LY~td~~~~~I~~~~ldg~~~-~~l--------~-----~~~~~P~~ 134 (573)
....+......+..|++.+. +..|+ +-...+.|.+.++..... ..+ + ........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 94 ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA-CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred cccccCcceeeeecccCCceeEEEEcCCCCCcEEE-EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeE
Confidence 11223333457788888876 44444 444567899988764321 110 0 12334678
Q ss_pred EEEeCC---CceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCC---eEEEEeCCCCeEEEEeCCC
Q psy952 135 ITLHPG---IGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTE---RLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 135 Iavdp~---~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~---~LYw~D~~~~~I~~~~~dG 207 (573)
+++.|. ...|..+. . ...|............+......-.....|++.+.+. .++++-...+.|...++..
T Consensus 173 ~~~~p~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSA-L-EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEECCCSSSCCEEEEEE-T-TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EEeccCCCCCcEEEEec-C-CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 888885 44444444 2 2333333222222222221112223446888887652 5555555666666666543
No 250
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.64 E-value=0.011 Score=58.81 Aligned_cols=143 Identities=6% Similarity=-0.029 Sum_probs=91.3
Q ss_pred CEEEEE-ecccEEEEEcCCCc-eeecc--c---CCcceEEEEEEcCC---CEEEEEECCCCeEEEEEcCCCcceEEEcCC
Q psy952 17 PWLIFS-NKYYVRNMSLDATQ-YSLVH--Q---DLLNVVAMDFHYKE---NRFYFADVAAKTIYRSRVGSTEKERVIRHD 86 (573)
Q Consensus 17 ~~l~~s-~~~~I~~i~l~g~~-~~~~~--~---~~~~~~~v~~d~~~---~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~ 86 (573)
..++.+ ....|+..++.... ...+. . ....+..++|.+.. +.++++-...+.|..+++........+...
T Consensus 35 ~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 114 (366)
T 3k26_A 35 PLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH 114 (366)
T ss_dssp CEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC
T ss_pred ceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCC
Confidence 344444 45678888887432 22221 1 22458899998764 456666667789999998765443334434
Q ss_pred CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec----cCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc
Q psy952 87 SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK----TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD 161 (573)
Q Consensus 87 ~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~----~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld 161 (573)
...+..|++.+..++++++-...+.|.+.++........+ .....+..|+++|...+|+.+. ....|...++.
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~ 191 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG--MDHSLKLWRIN 191 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE--TTSCEEEEESC
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec--CCCCEEEEECC
Confidence 4678889998745666666666789999998754443333 3445689999999766666554 24566666654
No 251
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.62 E-value=0.0058 Score=68.25 Aligned_cols=219 Identities=14% Similarity=0.183 Sum_probs=127.0
Q ss_pred ccEEEEEcCCCceeec-ccCCcceEEEEEEcCCCEEEEEECCC-------------CeEEEEEcCCCcc-eEEEcCCCC-
Q psy952 25 YYVRNMSLDATQYSLV-HQDLLNVVAMDFHYKENRFYFADVAA-------------KTIYRSRVGSTEK-ERVIRHDSH- 88 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~-~~~~~~~~~v~~d~~~~~ly~~d~~~-------------~~I~~~~~~g~~~-~~i~~~~~~- 88 (573)
..|+.+++++...... ... ....+++|.+. +.||++.... ..|++.++.+... ..++...-.
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~-~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKW-VKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEE-EESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEEECCCCCCCCccCCC-ceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 3688899987654222 111 11246789888 8899886532 3589999865432 233322212
Q ss_pred --CcceeEEeecCCcEEEEeC----CCCeEEEEEcCCC--c-eeEeccCCCCcceEEEeCCCceEEEEecC--CcCeEEE
Q psy952 89 --GLEGLAVDWVGRKLYWLDR----HSKQLDVAELDGT--N-RKTLKTAIQDPRGITLHPGIGYVYFSSWN--LQAYIGK 157 (573)
Q Consensus 89 --~p~glavD~~~~~LY~td~----~~~~I~~~~ldg~--~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~--~~~~I~r 157 (573)
...++++.+.++.|+++-. ....|++.++++. . .+.|.......... +.|..+.||+.... ...+|++
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEE
T ss_pred CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEE
Confidence 2457778777777777653 2458999998765 3 44454333222233 34667778776532 2568999
Q ss_pred EeccCC--CcEEEEecCCCCCCCceEEEeccCCeEEEEeCC--CCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCe
Q psy952 158 IGMDGS--NFTRILTHEDDIAWPNALTLDYFTERLYWADAH--LDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDH 231 (573)
Q Consensus 158 ~~ldG~--~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~--~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~ 231 (573)
+++++. ..+.++ ...-....+++++ +++|+++-.. ..+|+.++++|...+.+.... .....++++ .++.
T Consensus 346 ~d~~~~~~~~~~l~--~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~v~~~~~s~d~~~ 420 (741)
T 1yr2_A 346 VDLSGSTPRFDTVV--PESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG-IGSASGLSGRPGDRH 420 (741)
T ss_dssp EECSSSSCEEEEEE--CCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS-SCEEEEEECCBTCSC
T ss_pred EeCCCCccccEEEe--cCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC-CeEEEEeecCCCCCE
Confidence 999873 345555 2222222455555 7788887544 346888888887555443211 234455555 3445
Q ss_pred EEEe--c-CCCCceEEEeccCCc
Q psy952 232 IYWT--D-WNTKSINRADKFNGR 251 (573)
Q Consensus 232 lywt--d-~~~~~I~~~~~~~g~ 251 (573)
|+++ . ..-.+|+..+..+|+
T Consensus 421 l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 421 AYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEEcCCCCCCEEEEEECCCCc
Confidence 6544 2 223568888765554
No 252
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.62 E-value=0.011 Score=59.65 Aligned_cols=206 Identities=9% Similarity=0.010 Sum_probs=124.6
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc-------------CCCCCcceeEEeecCCcEEEEeCCC
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR-------------HDSHGLEGLAVDWVGRKLYWLDRHS 109 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~-------------~~~~~p~glavD~~~~~LY~td~~~ 109 (573)
....+..|+|.+.++.++++-...+.|..++++.......+. .....+..|++.+..+.++++-...
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 345688999998445555555567789888987643221111 1235677888877566677776677
Q ss_pred CeEEEEEcCCCceeEeccCCCCcceEEEeCCCc---eEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEecc
Q psy952 110 KQLDVAELDGTNRKTLKTAIQDPRGITLHPGIG---YVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYF 186 (573)
Q Consensus 110 ~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g---~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~ 186 (573)
+.|.+.++........+........+++.+... +|+... ..+.|...++........+ ...-.....|++.+.
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT--RGPKVQLCDLKSGSCSHIL--QGHRQEILAVSWSPR 197 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE--SSSSEEEEESSSSCCCEEE--CCCCSCEEEEEECSS
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc--CCCeEEEEeCCCcceeeee--cCCCCcEEEEEECCC
Confidence 899999998766555444445567888877533 444443 3556777777644433333 233344578999988
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcE--EEEEe-------------CCccceeEEEeee-CCeEEEecCCCCceEEEeccCC
Q psy952 187 TERLYWADAHLDYIASVDLDGKHK--HIVIS-------------GQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 187 ~~~LYw~D~~~~~I~~~~~dG~~~--~~l~~-------------~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g 250 (573)
+.+|+++-...+.|...++..... ..+.. .........|++. ++.++++-...+.|...+..++
T Consensus 198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 198 YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 777777666778888888764331 11100 0002345677774 3344444445567777776665
Q ss_pred cc
Q psy952 251 RD 252 (573)
Q Consensus 251 ~~ 252 (573)
..
T Consensus 278 ~~ 279 (408)
T 4a11_B 278 EN 279 (408)
T ss_dssp CB
T ss_pred cc
Confidence 54
No 253
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.61 E-value=0.0084 Score=60.19 Aligned_cols=195 Identities=8% Similarity=-0.027 Sum_probs=120.7
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc-
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR- 84 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~- 84 (573)
+|.+......+|+.+. ...|+..++........+. ....+..++|.+.+..++++-...+.|+..++........+.
T Consensus 131 ~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 210 (344)
T 4gqb_B 131 STVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC 210 (344)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec
Confidence 4444432234454443 4678888887654433333 345578999998888888887778899999987554332222
Q ss_pred -CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC-CceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC
Q psy952 85 -HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG-TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 85 -~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg-~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
.....+..+++.+.+++++++-...+.|.+.++.. .....+.........|++.|....++.+-. ....|...++..
T Consensus 211 ~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs-~D~~i~vwd~~~ 289 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS-EDCSLAVLDSSL 289 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE-TTSCEEEECTTC
T ss_pred ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe-CCCeEEEEECCC
Confidence 11235678888877888888877788999999864 334444445556789999996655544432 345676666654
Q ss_pred CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC
Q psy952 163 SNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 206 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d 206 (573)
.....+ ...-....+|++.+.+.+|+.+-...++|..-++.
T Consensus 290 ~~~~~~---~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 290 SELFRS---QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp CEEEEE---CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred CcEEEE---cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 332221 22233456888887777776655555555554443
No 254
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.55 E-value=0.0097 Score=61.58 Aligned_cols=199 Identities=10% Similarity=0.014 Sum_probs=118.3
Q ss_pred CCceeeCCCCCC-EEEEE-ecccEEEEEcCCCceeecc---cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce
Q psy952 6 ESTCKRRDSIKP-WLIFS-NKYYVRNMSLDATQYSLVH---QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE 80 (573)
Q Consensus 6 g~~C~~~~~~~~-~l~~s-~~~~I~~i~l~g~~~~~~~---~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 80 (573)
..+|.+.....+ +|+.+ ....|+..++.......+. .....+.+|+|.+.++.++++-...+.|...++.+....
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 356776542233 34443 3568888888754432222 223457899999877777777777788999999876655
Q ss_pred EEEcCCC--CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEE
Q psy952 81 RVIRHDS--HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKI 158 (573)
Q Consensus 81 ~i~~~~~--~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~ 158 (573)
.+..... .....|++++.+ +++++-...+.|.+.++++.....+........+|+++|....++.+-.. ...|...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~-d~~v~iw 278 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV-DQTVKIW 278 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET-TSBCCEE
T ss_pred EEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC-cceeeEE
Confidence 5543321 234678887644 45555566789999999887655554445567899999977767766432 3444444
Q ss_pred eccCC-CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 159 GMDGS-NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 159 ~ldG~-~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
++... ....+......-.....|++.+.+.+|+.+ ...+.|...++..
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~-~~D~~i~iwd~~~ 327 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT-DQKSEIRVYSASQ 327 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE-ESSSCEEEEESSS
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEE-cCCCEEEEEECCC
Confidence 44321 111111000111223577777666655544 4556777777654
No 255
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.50 E-value=0.096 Score=53.84 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=127.6
Q ss_pred CCceeeCCCCCCEEEEE-ecccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE
Q psy952 6 ESTCKRRDSIKPWLIFS-NKYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI 83 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s-~~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~ 83 (573)
+.+|...+ ..+|+.+ ..+.|+..++........+. ....+.+|+++ +.++++-...+.|...++........+
T Consensus 135 ~v~~~~~d--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 135 GVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp CEEEEECC--SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred cEEEEEEC--CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 45566653 2344444 45788889887654433333 33457778773 445555566788999998765443333
Q ss_pred cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee----EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEe
Q psy952 84 RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK----TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIG 159 (573)
Q Consensus 84 ~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~----~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ 159 (573)
......+..|+++ . .++++-...+.|.+.++...... .+.........|+++ ..+|+... ..+.|...+
T Consensus 210 ~~h~~~v~~l~~~--~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~--~dg~i~vwd 282 (435)
T 1p22_A 210 IHHCEAVLHLRFN--N-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS--GDRTIKVWN 282 (435)
T ss_dssp CCCCSCEEEEECC--T-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEE--TTSEEEEEE
T ss_pred cCCCCcEEEEEEc--C-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEEe--CCCeEEEEE
Confidence 3333456666654 3 45555556788999998754432 222334446677774 34555554 356777777
Q ss_pred ccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCC
Q psy952 160 MDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNT 239 (573)
Q Consensus 160 ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~ 239 (573)
+........+ .........++++ +. ++++-...+.|...++........+.+. .....+|++.+.. +++-...
T Consensus 283 ~~~~~~~~~~--~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~-l~sg~~d 355 (435)
T 1p22_A 283 TSTCEFVRTL--NGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRFDNKR-IVSGAYD 355 (435)
T ss_dssp TTTCCEEEEE--ECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEECCSSE-EEEEETT
T ss_pred CCcCcEEEEE--cCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCCCEEEEEeCC-cCcEEEEEecCCE-EEEEeCC
Confidence 7654433333 2222334556654 44 4444456778888888754443333332 3446677774444 4444455
Q ss_pred CceEEEeccCC
Q psy952 240 KSINRADKFNG 250 (573)
Q Consensus 240 ~~I~~~~~~~g 250 (573)
+.|...+..++
T Consensus 356 g~i~vwd~~~~ 366 (435)
T 1p22_A 356 GKIKVWDLVAA 366 (435)
T ss_dssp SCEEEEEHHHH
T ss_pred CcEEEEECCCC
Confidence 67776665443
No 256
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.07 Score=51.43 Aligned_cols=220 Identities=11% Similarity=0.049 Sum_probs=124.0
Q ss_pred CEEEEEe-cccEEEEEcCCCc----eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcc
Q psy952 17 PWLIFSN-KYYVRNMSLDATQ----YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLE 91 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~----~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~ 91 (573)
.+|+.+. ...|+.+++.... ...+......+..|+++ .+.| ++-...+.|..++ .+.... .+......+.
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l-~~~~~d~~i~~~d-~~~~~~-~~~~~~~~v~ 146 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVV-ISGSWDKTAKVWK-EGSLVY-NLQAHNASVW 146 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEE-EEEETTSEEEEEE-TTEEEE-EEECCSSCEE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEE-EEEeCCCCEEEEc-CCcEEE-ecccCCCcee
Confidence 3444443 4566667665321 12222234457788885 4444 4445567788887 332222 2333335677
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc-CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT-AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
.+++.+..+.++++-...+.|.+.+.. .....+.. .......+++.|.. .|+... ....|...++........+
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~--~dg~i~i~d~~~~~~~~~~- 221 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDG-HFISCS--NDGLIKLVDMHTGDVLRTY- 221 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETT-EEEEEE--TTSEEEEEETTTCCEEEEE-
T ss_pred EEEEccCCCCEEEEEECCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCC-eEEEcc--CCCeEEEEECCchhhhhhh-
Confidence 788877456666666667888888833 23333333 45557899999854 444443 3567888887644433333
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeC-CeEEEecCCCCceEEEeccC
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE-DHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~-~~lywtd~~~~~I~~~~~~~ 249 (573)
...-.....|++.+.+ +|+ +-...+.|...++........+... ......|++.. +. +++-...+.|...+..+
T Consensus 222 -~~~~~~i~~~~~~~~~-~l~-~~~~dg~v~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 222 -EGHESFVYCIKLLPNG-DIV-SCGEDRTVRIWSKENGSLKQVITLP-AISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp -ECCSSCEEEEEECTTS-CEE-EEETTSEEEEECTTTCCEEEEEECS-SSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred -hcCCceEEEEEEecCC-CEE-EEecCCEEEEEECCCCceeEEEecc-CceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 2333455788988655 544 4446778888887655444333332 33566777743 34 34444556666666544
Q ss_pred Cc
Q psy952 250 GR 251 (573)
Q Consensus 250 g~ 251 (573)
++
T Consensus 297 ~~ 298 (313)
T 3odt_A 297 SR 298 (313)
T ss_dssp GG
T ss_pred Cc
Confidence 43
No 257
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.48 E-value=0.048 Score=53.76 Aligned_cols=186 Identities=7% Similarity=-0.027 Sum_probs=104.9
Q ss_pred CEEEEEe-cccEEEEEcCCCc--eeecccCCcceEEEEEE------cCCCEEEEEECCCCeEEEEEcCCCc-ceEEEcCC
Q psy952 17 PWLIFSN-KYYVRNMSLDATQ--YSLVHQDLLNVVAMDFH------YKENRFYFADVAAKTIYRSRVGSTE-KERVIRHD 86 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~--~~~~~~~~~~~~~v~~d------~~~~~ly~~d~~~~~I~~~~~~g~~-~~~i~~~~ 86 (573)
.+|+.+. ...|+..++.... ...+......+..++|. +..+.| ++-...+.|..+++.... ....+...
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEI-VTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEE-EEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEE-EEEeCCCeEEEEeCCCCCCcceecccc
Confidence 4455444 5678888887544 22333334457778654 334444 455566788888887643 22233221
Q ss_pred ----CCCcceeE----EeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeC---CCceEEEEecCCcCeE
Q psy952 87 ----SHGLEGLA----VDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHP---GIGYVYFSSWNLQAYI 155 (573)
Q Consensus 87 ----~~~p~gla----vD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp---~~g~LYwtd~~~~~~I 155 (573)
...+..++ +.+. ++++++-...+.|.+.++.................|+++| ...+|+... ....|
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~dg~i 236 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQE-ERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATS--LEGKF 236 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-C-CCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE--STTEE
T ss_pred CCCCCCceEEEEEEeccCCC-CCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC--CCCeE
Confidence 12455565 3443 4455555566899999998766544444455688999998 566666654 24556
Q ss_pred EEEeccCCC-cEEEE--ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC
Q psy952 156 GKIGMDGSN-FTRIL--THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 206 (573)
Q Consensus 156 ~r~~ldG~~-~~~l~--~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d 206 (573)
...++.... ...+. .....-.....+++.+.+..++++-...+.|...++.
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred EEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 555543221 11110 0012333456888887665466666667777666654
No 258
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.44 E-value=0.075 Score=52.21 Aligned_cols=203 Identities=12% Similarity=0.044 Sum_probs=118.8
Q ss_pred EEEEEe-cccEEEEEcCCCc--e----eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 18 WLIFSN-KYYVRNMSLDATQ--Y----SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~--~----~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
+|+-+. ...|+..++.+.. . ..+......+..++|.+....|+ +-...+.|...++........+......+
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~-s~s~D~~v~~wd~~~~~~~~~~~~h~~~v 110 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL-SASWDKTLRLWDVATGETYQRFVGHKSDV 110 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE-EEeCCCEEEEEECCCCCeeEEEccCCCcE
Confidence 444333 4567766665321 1 11122334577899987655554 44566789999987654333333334577
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCC-----ceEEEEecCCcCeEEEEeccCCCc
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGI-----GYVYFSSWNLQAYIGKIGMDGSNF 165 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~-----g~LYwtd~~~~~~I~r~~ldG~~~ 165 (573)
..|++.+.+ .++++-...+.|.+.++.+.....+.........+++.|.. +.++++- +....|...++.....
T Consensus 111 ~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 111 MSVDIDKKA-SMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISA-GNDKMVKAWNLNQFQI 188 (319)
T ss_dssp EEEEECTTS-CEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEE-ETTSCEEEEETTTTEE
T ss_pred EEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEE-eCCCEEEEEECCcchh
Confidence 888888754 45555556788999999887776666555567788887743 2233443 2355666666654333
Q ss_pred EEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee
Q psy952 166 TRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF 228 (573)
Q Consensus 166 ~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~ 228 (573)
...+ ...-.....|++.+.+..|. +-...+.|...++........+.. ......|++.
T Consensus 189 ~~~~--~~h~~~v~~~~~sp~g~~l~-s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~s 246 (319)
T 3frx_A 189 EADF--IGHNSNINTLTASPDGTLIA-SAGKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAFS 246 (319)
T ss_dssp EEEE--CCCCSCEEEEEECTTSSEEE-EEETTCEEEEEETTTTEEEEEEEC--CSCEEEEEEC
T ss_pred heee--cCCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCcEEEEecC--CCcEEEEEEc
Confidence 3222 22333456889887555444 444567888888876544333332 2345677764
No 259
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.44 E-value=0.00097 Score=70.48 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=78.5
Q ss_pred CCcceEEEEEEcCCCEEEEEECC---------------------CCeEEEEEcCCCc-------ceEEEcC---------
Q psy952 43 DLLNVVAMDFHYKENRFYFADVA---------------------AKTIYRSRVGSTE-------KERVIRH--------- 85 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~---------------------~~~I~~~~~~g~~-------~~~i~~~--------- 85 (573)
.+.+|.++++++.++.||++-.+ .+.|+|+..++.. .+.++..
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 45679999999999999998432 2789999876532 2333311
Q ss_pred ------------CCCCcceeEEeecCCcEEE-EeCC-----------CCeEEEEEcCCCceeEecc--CCCCcceEEEeC
Q psy952 86 ------------DSHGLEGLAVDWVGRKLYW-LDRH-----------SKQLDVAELDGTNRKTLKT--AIQDPRGITLHP 139 (573)
Q Consensus 86 ------------~~~~p~glavD~~~~~LY~-td~~-----------~~~I~~~~ldg~~~~~l~~--~~~~P~~Iavdp 139 (573)
.+..|.+|+||. .++||+ ||.. .+.|++++.+....+.++. ....|.||++.|
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP 540 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred cccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC
Confidence 268899999996 578999 8863 3378888886444555553 346799999999
Q ss_pred CCceEEEEec
Q psy952 140 GIGYVYFSSW 149 (573)
Q Consensus 140 ~~g~LYwtd~ 149 (573)
...+||++-.
T Consensus 541 D~ktLfV~vQ 550 (592)
T 4a9v_A 541 DQKTLFVGIQ 550 (592)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999874
No 260
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.44 E-value=0.0078 Score=60.65 Aligned_cols=195 Identities=8% Similarity=-0.023 Sum_probs=119.6
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc-
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR- 84 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~- 84 (573)
+|.+......+|+.+. ...|+..++........+. ....+..|+|.+..+.++++-...+.|+..++........+.
T Consensus 143 ~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~ 222 (357)
T 4g56_B 143 KTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF 222 (357)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee
Confidence 4444332223444433 4678888887654433333 345578999998777788887778889888886543322221
Q ss_pred -CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC
Q psy952 85 -HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 85 -~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
..-..+..|++.+.+++++.+-...+.|.+.++.... ..++.........|++.|..+.+..+- +....|...++..
T Consensus 223 ~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasg-s~D~~i~iwd~~~ 301 (357)
T 4g56_B 223 CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASI-SEDCTVAVLDADF 301 (357)
T ss_dssp TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEE-ETTSCEEEECTTS
T ss_pred ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEE-eCCCEEEEEECCC
Confidence 1224567888887778888776677889999986543 344444445578999999765554443 2345677776664
Q ss_pred CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC
Q psy952 163 SNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 206 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d 206 (573)
.....+. ..-...++|++.|.++.++.+-...+.|..-++.
T Consensus 302 ~~~~~~~---~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 302 SEVFRDL---SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEEEC---CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred CcEeEEC---CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 4322222 2223457888887666666665566666666654
No 261
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.41 E-value=0.075 Score=57.61 Aligned_cols=234 Identities=9% Similarity=0.027 Sum_probs=135.1
Q ss_pred CEEEEEecccEEEEEcCCC-ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC-cc-eEEEcCCCCCccee
Q psy952 17 PWLIFSNKYYVRNMSLDAT-QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST-EK-ERVIRHDSHGLEGL 93 (573)
Q Consensus 17 ~~l~~s~~~~I~~i~l~g~-~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~-~~i~~~~~~~p~gl 93 (573)
..|+++..+.|+..++... ....+......+..++|.+....| .+-...+.|...++... .. ...+......+..|
T Consensus 31 ~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v 109 (611)
T 1nr0_A 31 DKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI 109 (611)
T ss_dssp SEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEE
T ss_pred CEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcceeeEeecccCCceEEE
Confidence 4777777778888888643 333333344558899999865554 44445678888888532 22 11222223578899
Q ss_pred EEeecCCcEEEEeCCC---CeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 94 AVDWVGRKLYWLDRHS---KQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 94 avD~~~~~LY~td~~~---~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
++++.++.|..+.... +.|...+. |....++.........+++.|...+++.+-. ....|...++........+
T Consensus 110 ~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s-~D~~v~lwd~~~~~~~~~l- 186 (611)
T 1nr0_A 110 SWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNLTGQARAMNSVDFKPSRPFRIISGS-DDNTVAIFEGPPFKFKSTF- 186 (611)
T ss_dssp EECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCCCCCSSCEEEEEECSSSSCEEEEEE-TTSCEEEEETTTBEEEEEE-
T ss_pred EECCCCCEEEEEECCCCceeEEEEeeC-CCCcceecCCCCCceEEEECCCCCeEEEEEe-CCCeEEEEECCCCeEeeee-
Confidence 9998888777665433 24554442 3333334344456789999997665555542 2445555444322222222
Q ss_pred cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeC-----CccceeEEEeee-CCeEEEecCCCCceE
Q psy952 171 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISG-----QKVPHVFALTLF-EDHIYWTDWNTKSIN 243 (573)
Q Consensus 171 ~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~-----~~~~~p~~ia~~-~~~lywtd~~~~~I~ 243 (573)
...-.....+++.+.+ +++.+-...+.|...++. |.....+... .......+|++. ++.++.+-...+.|.
T Consensus 187 -~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~ 264 (611)
T 1nr0_A 187 -GEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 264 (611)
T ss_dssp -CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -ccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 2333455789998754 455555566778887764 4333333221 112346778874 455566655667777
Q ss_pred EEeccCCcceEEE
Q psy952 244 RADKFNGRDYRVL 256 (573)
Q Consensus 244 ~~~~~~g~~~~~l 256 (573)
.-+..+++....+
T Consensus 265 lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 265 IWNVATLKVEKTI 277 (611)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeCCCCceeeee
Confidence 7676666555444
No 262
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.41 E-value=0.036 Score=54.72 Aligned_cols=236 Identities=6% Similarity=-0.005 Sum_probs=130.3
Q ss_pred ceeeCCCCCCEEEEEe-----cccEEEEEcCCCceeec--ccCCcceEEEEEEcCC--CEEEEEECCCCeEEEEEcCCCc
Q psy952 8 TCKRRDSIKPWLIFSN-----KYYVRNMSLDATQYSLV--HQDLLNVVAMDFHYKE--NRFYFADVAAKTIYRSRVGSTE 78 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-----~~~I~~i~l~g~~~~~~--~~~~~~~~~v~~d~~~--~~ly~~d~~~~~I~~~~~~g~~ 78 (573)
++.+.......|+.+. ...|+..++.+...... ......+..++|.+.. +.++++-...+.|..+++....
T Consensus 22 ~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 101 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE 101 (357)
T ss_dssp EEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS
T ss_pred EEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC
Confidence 3444332233555544 56788888876654322 2334567899999874 4555555567789999987654
Q ss_pred -ceEEEcCCCCCcceeE------EeecCCcEEEEeCCCCeEEEEEcCCCc--eeEecc--C--CCCcceEE----EeCCC
Q psy952 79 -KERVIRHDSHGLEGLA------VDWVGRKLYWLDRHSKQLDVAELDGTN--RKTLKT--A--IQDPRGIT----LHPGI 141 (573)
Q Consensus 79 -~~~i~~~~~~~p~gla------vD~~~~~LY~td~~~~~I~~~~ldg~~--~~~l~~--~--~~~P~~Ia----vdp~~ 141 (573)
....+......+..|+ +.+.++.| ++-...+.|.+.++.... ...+.. + ......++ ++|..
T Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 102 MPVYSVKGHKEIINAIDGIGGLGIGEGAPEI-VTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp SCSEEECCCSSCEEEEEEESGGGCC-CCCEE-EEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred ccEEEEEecccceEEEeeccccccCCCccEE-EEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC
Confidence 3333333334555663 33334444 454557789999987543 333322 1 12355666 45655
Q ss_pred ceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEec---cCCeEEEEeCCCCeEEEEeCCCCc-EEEEE---
Q psy952 142 GYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDY---FTERLYWADAHLDYIASVDLDGKH-KHIVI--- 214 (573)
Q Consensus 142 g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~---~~~~LYw~D~~~~~I~~~~~dG~~-~~~l~--- 214 (573)
.+|+... ....|...++......... ..-.....+++.+ .+..|+.+ ...+.|...++.... ...+.
T Consensus 181 ~~l~~~~--~d~~i~i~d~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 181 RVVCAGY--DNGDIKLFDLRNMALRWET---NIKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVS 254 (357)
T ss_dssp CEEEEEE--TTSEEEEEETTTTEEEEEE---ECSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEE
T ss_pred CEEEEEc--cCCeEEEEECccCceeeec---CCCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeec
Confidence 5555544 3567888887765543333 2233457888887 55555555 456777776654321 11111
Q ss_pred -eCCccceeEEEeeeC-Ce-EEEecCCCCceEEEeccCCc
Q psy952 215 -SGQKVPHVFALTLFE-DH-IYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 215 -~~~~~~~p~~ia~~~-~~-lywtd~~~~~I~~~~~~~g~ 251 (573)
... ......|++.. +. ++++-...+.|...+...+.
T Consensus 255 ~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 255 EKAH-KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred cCCC-cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 122 33556777754 33 66666666677665544443
No 263
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.38 E-value=0.15 Score=60.04 Aligned_cols=246 Identities=8% Similarity=-0.042 Sum_probs=141.4
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR 84 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~ 84 (573)
.+|.+......+|+.+. .+.|+..++...... .+......+.+++|.+.++.|..+. ..+.|..+++........+.
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS-ADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEECCCCceEEEEc
Confidence 34555443334555443 467888888655432 3333445688999998766665554 56789999987654433343
Q ss_pred CCCCCcceeEEeecCC-cEEEEeCCCCeEEEEEcCCCce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC
Q psy952 85 HDSHGLEGLAVDWVGR-KLYWLDRHSKQLDVAELDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 85 ~~~~~p~glavD~~~~-~LY~td~~~~~I~~~~ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
.....+..+++.+..+ .++++-...+.|.+.++..... .++.........++++|...+|+... ..+.|...++..
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s--~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS--ADGTLRLWDVRS 774 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE--SSSEEEEEEGGG
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE--CCCeEEEEeCCC
Confidence 3445677888876433 4555556678899999875543 33444555688999999665555544 245666666654
Q ss_pred CCcEEEEecC-----------CCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CC
Q psy952 163 SNFTRILTHE-----------DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-ED 230 (573)
Q Consensus 163 ~~~~~l~~~~-----------~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~ 230 (573)
......+... ..-.....+++.+.+..|..+. .+.|...++...................+++. .+
T Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 775 ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852 (1249)
T ss_dssp TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST
T ss_pred CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC
Confidence 3322211100 0111345677887777777765 46788888765544333331113344555553 33
Q ss_pred eEEEecCCCCceEEEeccCCcceEEEc
Q psy952 231 HIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 231 ~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
.++++-...+.|...+..++.....+.
T Consensus 853 ~~l~~~~~dg~v~vwd~~~~~~~~~~~ 879 (1249)
T 3sfz_A 853 HLAVIALSQYCVELWNIDSRLKVADCR 879 (1249)
T ss_dssp TEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred CEEEEEeCCCeEEEEEcCCCceeeecC
Confidence 444444455666666655554444443
No 264
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.36 E-value=0.013 Score=65.46 Aligned_cols=193 Identities=13% Similarity=0.080 Sum_probs=109.3
Q ss_pred EEEEEecccEEEEEcCCCceeeccc-C------------------CcceEEEEEEcCCCEEEEEECCC------------
Q psy952 18 WLIFSNKYYVRNMSLDATQYSLVHQ-D------------------LLNVVAMDFHYKENRFYFADVAA------------ 66 (573)
Q Consensus 18 ~l~~s~~~~I~~i~l~g~~~~~~~~-~------------------~~~~~~v~~d~~~~~ly~~d~~~------------ 66 (573)
.|+|...+.|+.+++.+.....+.. + +....+++|.+.+++|.++....
T Consensus 125 ~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~ 204 (740)
T 4a5s_A 125 KLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYS 204 (740)
T ss_dssp CEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECC
T ss_pred EEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeec
Confidence 5666667789988887655433321 1 11223578888888777653111
Q ss_pred -----------------------CeEEEEEcCC---C---cceEEEcC-----CCCCcceeEEeecCCc-EEEEeCCC--
Q psy952 67 -----------------------KTIYRSRVGS---T---EKERVIRH-----DSHGLEGLAVDWVGRK-LYWLDRHS-- 109 (573)
Q Consensus 67 -----------------------~~I~~~~~~g---~---~~~~i~~~-----~~~~p~glavD~~~~~-LY~td~~~-- 109 (573)
..|+.+++++ + ....+... .......+++.+.++. +|+.....
T Consensus 205 ~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~ 284 (740)
T 4a5s_A 205 DESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNY 284 (740)
T ss_dssp STTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTE
T ss_pred CCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCE
Confidence 1466667765 4 22222210 1122344556555553 34444332
Q ss_pred CeEEEEEcCCCc-------eeEec----cCCCC---cceEEEeCCCceEE-EEe-cCCcCeEEEEeccCCCcEEEEecCC
Q psy952 110 KQLDVAELDGTN-------RKTLK----TAIQD---PRGITLHPGIGYVY-FSS-WNLQAYIGKIGMDGSNFTRILTHED 173 (573)
Q Consensus 110 ~~I~~~~ldg~~-------~~~l~----~~~~~---P~~Iavdp~~g~LY-wtd-~~~~~~I~r~~ldG~~~~~l~~~~~ 173 (573)
..|.+.++++.. ..+++ ..... +..+++.|....|+ |.. ......|++.+++|...+.|. ..
T Consensus 285 ~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT--~g 362 (740)
T 4a5s_A 285 SVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT--KG 362 (740)
T ss_dssp EEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC--CS
T ss_pred EEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc--cC
Confidence 368888877644 22232 11112 55788999776665 553 223568999999998776655 22
Q ss_pred CCCCCceEEEeccCCeEEEEeCC------CCeEEEEeCCCCcEEEEE
Q psy952 174 DIAWPNALTLDYFTERLYWADAH------LDYIASVDLDGKHKHIVI 214 (573)
Q Consensus 174 ~l~~P~glaiD~~~~~LYw~D~~------~~~I~~~~~dG~~~~~l~ 214 (573)
....-.-+.+| +++||++... ...|++++++|...+..+
T Consensus 363 ~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~l 407 (740)
T 4a5s_A 363 TWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCL 407 (740)
T ss_dssp SSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEES
T ss_pred CEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEECCCCCcceee
Confidence 22111223355 8899998654 347999999987665333
No 265
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.33 E-value=0.00012 Score=78.20 Aligned_cols=30 Identities=43% Similarity=0.984 Sum_probs=29.1
Q ss_pred ceecC-CCcccCCCcccCCCCCCCCCCCCCC
Q psy952 415 EFACR-NGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 415 ~f~C~-~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
+|+|. +|+|||..|+|||.+||+|+|||..
T Consensus 69 ~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~ 99 (554)
T 3ojy_A 69 DFQCKETGRCLKRHLVCNGDQDCLDGSDEDD 99 (554)
T ss_dssp SEECSSSCCEECGGGTTSSSCCSSSCTTSSS
T ss_pred cCccCCCCEEcccccccCCcccCCCcccccc
Confidence 89999 9999999999999999999999976
No 266
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.32 E-value=0.2 Score=51.64 Aligned_cols=232 Identities=15% Similarity=0.061 Sum_probs=131.3
Q ss_pred ceeeCCCCCCEEEEE-ecccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 8 TCKRRDSIKPWLIFS-NKYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s-~~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
+|...+ ..+|+.+ ..+.|+..++........+. ....+..|+|.+.+ ++++-...+.|...++........+..
T Consensus 126 ~~~~~~--~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 126 TCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEC--CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 455443 2344443 35688888887654433333 34557899997544 555556678899999876544444443
Q ss_pred CCCCcceeEEeec-CCcEEEEeCCCCeEEEEEcCCCceeE------------------------eccCCCCcceEEEeCC
Q psy952 86 DSHGLEGLAVDWV-GRKLYWLDRHSKQLDVAELDGTNRKT------------------------LKTAIQDPRGITLHPG 140 (573)
Q Consensus 86 ~~~~p~glavD~~-~~~LY~td~~~~~I~~~~ldg~~~~~------------------------l~~~~~~P~~Iavdp~ 140 (573)
....+..|++.+. .+.++++-...+.|.+.++....... +........ ++.+.
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVSGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEE--EEEEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEE--EEcCC
Confidence 4457778888753 44566666667888888876543211 111111222 33443
Q ss_pred CceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccc
Q psy952 141 IGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVP 220 (573)
Q Consensus 141 ~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~ 220 (573)
..+|+... ....|...++........+ ...-.....+++++.+..|+.+ ...+.|...++........+.+. ..
T Consensus 280 ~~~l~~~~--~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~h-~~ 353 (464)
T 3v7d_B 280 GNIVVSGS--YDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDHERKRCISA-SMDTTIRIWDLENGELMYTLQGH-TA 353 (464)
T ss_dssp TTEEEEEE--TTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECCC-SS
T ss_pred CCEEEEEe--CCCeEEEEECCCCcEEEEe--cCCCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEEeCC-CC
Confidence 44555544 2456777776543333233 2333445688998766666654 45678888888654433333332 23
Q ss_pred eeEEEeeeCCeEEEecCCCCceEEEeccCCcc
Q psy952 221 HVFALTLFEDHIYWTDWNTKSINRADKFNGRD 252 (573)
Q Consensus 221 ~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~ 252 (573)
....|++.+. .+++-...+.|...+..++..
T Consensus 354 ~v~~~~~~~~-~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 354 LVGLLRLSDK-FLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp CEEEEEECSS-EEEEEETTSEEEEEETTTCCE
T ss_pred cEEEEEEcCC-EEEEEeCCCcEEEEECCCCce
Confidence 4566666544 444444556777766655543
No 267
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.056 Score=53.74 Aligned_cols=202 Identities=7% Similarity=-0.042 Sum_probs=115.5
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE--EEcCCCCCcceeEEeec-CCcEEEEeCCCCeEEEEEcCCC
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER--VIRHDSHGLEGLAVDWV-GRKLYWLDRHSKQLDVAELDGT 120 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--i~~~~~~~p~glavD~~-~~~LY~td~~~~~I~~~~ldg~ 120 (573)
...+..|+|++.+..|..+. ..+.|+.+++.+..... .+......+..|++.+. .+.++++-...+.|.+.++...
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred cccEEEEEEcCCCCEEEEEE-CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 34578999998766666554 45678777776432222 23323346677777544 1444455455678999888765
Q ss_pred ce---eEeccCCCCcceEEEeCC--CceEEEEecCCcCeEEEEeccCC--CcEEEEecCCCCCCCceEEEecc-------
Q psy952 121 NR---KTLKTAIQDPRGITLHPG--IGYVYFSSWNLQAYIGKIGMDGS--NFTRILTHEDDIAWPNALTLDYF------- 186 (573)
Q Consensus 121 ~~---~~l~~~~~~P~~Iavdp~--~g~LYwtd~~~~~~I~r~~ldG~--~~~~l~~~~~~l~~P~glaiD~~------- 186 (573)
.. ..+.........|+++|. ..+|+.+. ....|...++... .....+ .........+++.+.
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCTTSCCCEEEE--ECCTTCEEEEEECCCC------
T ss_pred ceeEeeeecCCCcceEEEEeCCCCCCCEEEEec--CCCcEEEEecCCCCceeeEEe--cCCCCceEEEEEcCcccccccc
Confidence 42 222234556889999997 45555554 3556777766644 222223 233334567888864
Q ss_pred -----CCeEEEEeCCCCeEEEEeCCCCc-EE-EEE--eCCccceeEEEeeeC----CeEEEecCCCCceEEEeccCCc
Q psy952 187 -----TERLYWADAHLDYIASVDLDGKH-KH-IVI--SGQKVPHVFALTLFE----DHIYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 187 -----~~~LYw~D~~~~~I~~~~~dG~~-~~-~l~--~~~~~~~p~~ia~~~----~~lywtd~~~~~I~~~~~~~g~ 251 (573)
++.++++-...+.|...++.... .. .+. ... ......|++.. +.++++-...+.|...+..++.
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 35555555556777777765332 21 221 121 23456777743 4555655556667666655543
No 268
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.31 E-value=0.16 Score=50.28 Aligned_cols=205 Identities=11% Similarity=0.038 Sum_probs=117.2
Q ss_pred CEEEEEe-cccEEEEEcCCCc--ee---ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 17 PWLIFSN-KYYVRNMSLDATQ--YS---LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~--~~---~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
.+|+.+. .+.|+..++.... .. .+......+..+.|.+ .+.| ++-...+.|...++........+......+
T Consensus 110 ~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQI-VTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp SEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TTEE-EEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CCcE-EEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence 3444433 4566777775432 11 1122234466777864 4454 444556788888987654433343334567
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~ 169 (573)
..|++.+. ++++++-...+.|.+.++.... ..++........+|+++|...+|+... ....|...++.........
T Consensus 188 ~~~~~~~~-~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 188 MSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS--DDATCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCC-CCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc--CCCcEEEEECCCCcEEEEE
Confidence 88888874 4566666677889999986543 344444555688999999655554443 3556777776544332222
Q ss_pred ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee
Q psy952 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF 228 (573)
Q Consensus 170 ~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~ 228 (573)
...........+++.+.+..|. +-...+.|...++........+.+. ......|++.
T Consensus 265 ~~~~~~~~v~~~~~s~~g~~l~-~g~~d~~i~vwd~~~~~~~~~~~~h-~~~v~~~~~s 321 (340)
T 1got_B 265 SHDNIICGITSVSFSKSGRLLL-AGYDDFNCNVWDALKADRAGVLAGH-DNRVSCLGVT 321 (340)
T ss_dssp CCTTCCSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEC
T ss_pred ccCCcccceEEEEECCCCCEEE-EECCCCeEEEEEcccCcEeeEeecC-CCcEEEEEEc
Confidence 1011122346788886555544 4445678888887654443333332 2345566663
No 269
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.29 E-value=0.053 Score=53.21 Aligned_cols=191 Identities=10% Similarity=-0.057 Sum_probs=114.5
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc----ceEEEcCCCCCcceeEEeecCC-cEEEEeCCCCeEEEEEc-
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE----KERVIRHDSHGLEGLAVDWVGR-KLYWLDRHSKQLDVAEL- 117 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~i~~~~~~~p~glavD~~~~-~LY~td~~~~~I~~~~l- 117 (573)
...+.+|+|.+....|+.+. ..+.|+.++++... ...+.. ....+..|++.+.++ .|+.+. ..+.|.+.++
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~ 87 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLI 87 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSS
T ss_pred CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEc-CCCeEEEEEec
Confidence 34588999998777666654 55678888876554 333332 235788899988666 565554 5678999999
Q ss_pred CCCceeEecc--CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC---------CCcEEEEecCCCCCCCceEEEecc
Q psy952 118 DGTNRKTLKT--AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG---------SNFTRILTHEDDIAWPNALTLDYF 186 (573)
Q Consensus 118 dg~~~~~l~~--~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG---------~~~~~l~~~~~~l~~P~glaiD~~ 186 (573)
.+.....+.. .......|++.| ..+|+... ....|...++.. ...... ...-..+..|++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 88 GSPSFQALTNNEANLGICRICKYG-DDKLIAAS--WDGLIEVIDPRNYGDGVIAVKNLNSNN---TKVKNKIFTMDTNSS 161 (342)
T ss_dssp SSSSEEECBSCCCCSCEEEEEEET-TTEEEEEE--TTSEEEEECHHHHTTBCEEEEESCSSS---SSSCCCEEEEEECSS
T ss_pred cCCceEeccccCCCCceEEEEeCC-CCEEEEEc--CCCeEEEEcccccccccccccCCeeeE---EeeCCceEEEEecCC
Confidence 8776655555 556688999999 66666554 245666666542 111000 111223456777633
Q ss_pred CCeEEEEeCCCCeEEEEeCCC-Cc--EEEEEeCCccceeEEEeee--CCeEEEecCCCCceEEEec
Q psy952 187 TERLYWADAHLDYIASVDLDG-KH--KHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 187 ~~~LYw~D~~~~~I~~~~~dG-~~--~~~l~~~~~~~~p~~ia~~--~~~lywtd~~~~~I~~~~~ 247 (573)
.|+.+ ...+.|...++.. .. ........ ...+..|++. ++.++++-...+.|...+.
T Consensus 162 --~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 162 --RLIVG-MNNSQVQWFRLPLCEDDNGTIEESGL-KYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp --EEEEE-ESTTEEEEEESSCCTTCCCEEEECSC-SSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred --cEEEE-eCCCeEEEEECCccccccceeeecCC-CCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 35544 4567788888876 33 22222221 2356677775 3555555555666665443
No 270
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.28 E-value=0.07 Score=62.96 Aligned_cols=242 Identities=12% Similarity=0.039 Sum_probs=145.3
Q ss_pred ceeeCCCCCCEEEEEecccEEEEEcCCCceee-c-ccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 8 TCKRRDSIKPWLIFSNKYYVRNMSLDATQYSL-V-HQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~-~-~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
+|.+......+|+.+..+.|+.+++....... + ......+..++|.+.+..|+.+ ...+.|..++++.......+..
T Consensus 802 ~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~ 880 (1249)
T 3sfz_A 802 KCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIA-LSQYCVELWNIDSRLKVADCRG 880 (1249)
T ss_dssp CCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEE-CSSSCEEEEETTTTEEEEEECC
T ss_pred EEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceeeecCC
Confidence 34444444557777778889999987654322 2 2334567899999866665554 5567899999876554444444
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce------------------------------eEe--------cc
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR------------------------------KTL--------KT 127 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~------------------------------~~l--------~~ 127 (573)
....+.++++.+.++.|+ +-...+.|.+.++..... ..+ ..
T Consensus 881 h~~~v~~v~~spdg~~l~-s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDGSSFL-TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CSSCEEEEEECTTSSEEE-EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CccceEEEEECCCCCEEE-EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 456788999987555554 444566777766532100 000 00
Q ss_pred CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 128 AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 128 ~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
.......++++|...+|+.... .+.|...++......... ...-.....+++.+.+..|..+ ...+.|...++..
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~--~g~i~i~d~~~~~~~~~~--~~h~~~v~~l~~s~dg~~l~s~-~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDE--DGAIKIIELPNNRVFSSG--VGHKKAVRHIQFTADGKTLISS-SEDSVIQVWNWQT 1034 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEET--TSCCEEEETTTTSCEEEC--CCCSSCCCCEEECSSSSCEEEE-CSSSBEEEEETTT
T ss_pred ccCcEEEEEEcCCCCEEEEEcC--CCCEEEEEcCCCceeeec--ccCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCC
Confidence 1223677888887777766653 456666666544433333 2333455789998766666554 4567888888876
Q ss_pred CcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 208 KHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 208 ~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
.....+... ......+++..+..+++-...+.|...+..+++....+..
T Consensus 1035 ~~~~~~~~~--~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 1083 (1249)
T 3sfz_A 1035 GDYVFLQAH--QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC 1083 (1249)
T ss_dssp TEEECCBCC--SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC
T ss_pred CceEEEecC--CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc
Confidence 544332221 2345667765555455555567777777777776665543
No 271
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.25 E-value=0.029 Score=62.05 Aligned_cols=194 Identities=13% Similarity=0.135 Sum_probs=117.8
Q ss_pred cCCCEEEEEECCC----CeEEEEEcCCCcceEEEcCC-C-----CCcceeEEeecCCcEEEEeCC----CCeEEEEEcCC
Q psy952 54 YKENRFYFADVAA----KTIYRSRVGSTEKERVIRHD-S-----HGLEGLAVDWVGRKLYWLDRH----SKQLDVAELDG 119 (573)
Q Consensus 54 ~~~~~ly~~d~~~----~~I~~~~~~g~~~~~i~~~~-~-----~~p~glavD~~~~~LY~td~~----~~~I~~~~ldg 119 (573)
+.+++||++-... ..|++...+++..++++..+ + ....++++.+.++.|.++-.. ...|.+.++++
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 4578888875432 57899998777766665422 1 135678888888887766432 25799999987
Q ss_pred CceeEeccCCCC--cceEEEeCCCceEEEEecCC-----------cCeEEEEeccCCCc--EEEEecCCCCCCCceEEEe
Q psy952 120 TNRKTLKTAIQD--PRGITLHPGIGYVYFSSWNL-----------QAYIGKIGMDGSNF--TRILTHEDDIAWPNALTLD 184 (573)
Q Consensus 120 ~~~~~l~~~~~~--P~~Iavdp~~g~LYwtd~~~-----------~~~I~r~~ldG~~~--~~l~~~~~~l~~P~glaiD 184 (573)
..... ...+.. ..+++..|....||++.... ...|++.++.+... +.+......-..-.++++.
T Consensus 157 g~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 157 GEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 65420 112222 26899999888888886421 34599988876542 3343101111233578899
Q ss_pred ccCCeEEEEeCC---CCeEEEEeCCCCcEEEEEeCCccceeEEE-eeeCCeEEEe-cC--CCCceEEEeccCCc
Q psy952 185 YFTERLYWADAH---LDYIASVDLDGKHKHIVISGQKVPHVFAL-TLFEDHIYWT-DW--NTKSINRADKFNGR 251 (573)
Q Consensus 185 ~~~~~LYw~D~~---~~~I~~~~~dG~~~~~l~~~~~~~~p~~i-a~~~~~lywt-d~--~~~~I~~~~~~~g~ 251 (573)
+++.+|+++... ...|+.++..+...+.|.... ...... ...++ ||++ ++ .+.+|++++..++.
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV--GAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS--SCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC--CceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 888888876543 347887776555555555432 112222 23445 6664 43 35788888866654
No 272
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.23 E-value=0.083 Score=54.09 Aligned_cols=241 Identities=10% Similarity=0.060 Sum_probs=130.2
Q ss_pred CCceeeCCCCCCEEEEEe-cccEEEEEcCCCc-----------eeecccCC-------------cceEEEEEEcCCC-EE
Q psy952 6 ESTCKRRDSIKPWLIFSN-KYYVRNMSLDATQ-----------YSLVHQDL-------------LNVVAMDFHYKEN-RF 59 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~-----------~~~~~~~~-------------~~~~~v~~d~~~~-~l 59 (573)
..+|.+......+|+.+. ...|+..++.... ....+.+. ..+..|+|.+..+ .+
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence 445555543344666554 4678888876443 11112222 4478899998763 34
Q ss_pred EEEECCCCeEEEEEcCCCcce----------------------------------------EEEcCCCCCcceeEEeecC
Q psy952 60 YFADVAAKTIYRSRVGSTEKE----------------------------------------RVIRHDSHGLEGLAVDWVG 99 (573)
Q Consensus 60 y~~d~~~~~I~~~~~~g~~~~----------------------------------------~i~~~~~~~p~glavD~~~ 99 (573)
+++-...+.|..+++...... .+.......+..|++.+.+
T Consensus 110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 189 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY 189 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS
T ss_pred EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC
Confidence 444455667777666432110 1112223567788988755
Q ss_pred CcEEEEeCCCCeEEEEEcC-CCce-eEe------c-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCc----E
Q psy952 100 RKLYWLDRHSKQLDVAELD-GTNR-KTL------K-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF----T 166 (573)
Q Consensus 100 ~~LY~td~~~~~I~~~~ld-g~~~-~~l------~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~----~ 166 (573)
+.|. +- ..+.|.+.++. +... .++ + ........|+++|....++++-. ....|...++..... .
T Consensus 190 ~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 190 ETYL-SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS-SKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp SEEE-EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE-TTSCEEEEETTTCSSSCTTC
T ss_pred CEEE-Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe-CCCeEEEEECcCCcccccee
Confidence 5444 44 58899999988 3222 222 1 23344789999996524444432 355677777664442 2
Q ss_pred EEEecCCCCC------------CCceEEEeccCCeEEEEeCCCCeEEEEeCC--CCcEEEEEeCCccc------------
Q psy952 167 RILTHEDDIA------------WPNALTLDYFTERLYWADAHLDYIASVDLD--GKHKHIVISGQKVP------------ 220 (573)
Q Consensus 167 ~l~~~~~~l~------------~P~glaiD~~~~~LYw~D~~~~~I~~~~~d--G~~~~~l~~~~~~~------------ 220 (573)
..+ ..... ....|++.+.+..|..+.. +.|...++. +.....+.....+.
T Consensus 267 ~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 267 KLF--EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp EEE--CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred eEe--ccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 233 12211 4578999986666666554 888888875 33333332211000
Q ss_pred -eeEEEeee-CCeEEEecCCCCceEEEeccCCcce
Q psy952 221 -HVFALTLF-EDHIYWTDWNTKSINRADKFNGRDY 253 (573)
Q Consensus 221 -~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~ 253 (573)
..+.+++. ++.++++-...+.|...+..+++..
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 02235553 3334455556677777776666544
No 273
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.22 E-value=0.08 Score=52.27 Aligned_cols=222 Identities=9% Similarity=0.010 Sum_probs=121.3
Q ss_pred EEEEEe-cccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEE---cCCCCCcce
Q psy952 18 WLIFSN-KYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVI---RHDSHGLEG 92 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~---~~~~~~p~g 92 (573)
+|+.+. ...|+.+++...... .+......+.+|+|.+.++.++++-...+.|+.+++........+ ......+..
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 455444 457888888755433 333344568899999855666666666788999998765444344 233467888
Q ss_pred eEEeecCCcEEEEeCCCCeEEEEEcCCCceeE-ec----------------------------cCCCCcceEEEeCCCce
Q psy952 93 LAVDWVGRKLYWLDRHSKQLDVAELDGTNRKT-LK----------------------------TAIQDPRGITLHPGIGY 143 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~~I~~~~ldg~~~~~-l~----------------------------~~~~~P~~Iavdp~~g~ 143 (573)
|++.+.++.|+.+. ..+.|.+.++....... +. ........|+++ ..+
T Consensus 167 ~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 167 ADYDLLGEKIMSCG-MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp EEECTTSSEEEEEE-TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred EEECCCCCEEEEec-CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 99987655555544 56789998887532211 10 022346677777 234
Q ss_pred EEEEecCCcCeEEEEeccCCCc------------EEEEecCCCCCCCceEEEecc--CCeEEEEeCCCCeEEEEeCCCCc
Q psy952 144 VYFSSWNLQAYIGKIGMDGSNF------------TRILTHEDDIAWPNALTLDYF--TERLYWADAHLDYIASVDLDGKH 209 (573)
Q Consensus 144 LYwtd~~~~~~I~r~~ldG~~~------------~~l~~~~~~l~~P~glaiD~~--~~~LYw~D~~~~~I~~~~~dG~~ 209 (573)
|+... ....|...++..... ..+......-.....|++.+. +..|+. -...+.|...++....
T Consensus 244 l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~-~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 244 ILSKS--CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL-GNQVGKLYVWDLEVED 320 (366)
T ss_dssp EEEEC--SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE-ECTTSCEEEEECCSSS
T ss_pred EEEEe--cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE-EecCCcEEEEECCCCC
Confidence 43333 345566655543221 111110122233567777765 444444 4567788888887643
Q ss_pred E----EEEEeCCc-cceeEEEeee-CCeEEEecCCCCceEEE
Q psy952 210 K----HIVISGQK-VPHVFALTLF-EDHIYWTDWNTKSINRA 245 (573)
Q Consensus 210 ~----~~l~~~~~-~~~p~~ia~~-~~~lywtd~~~~~I~~~ 245 (573)
. ........ ......|++. ++.++++-...+.|..-
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 362 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRW 362 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEE
Confidence 1 11122210 2345667764 33344443344455433
No 274
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.22 E-value=0.11 Score=50.55 Aligned_cols=203 Identities=8% Similarity=-0.034 Sum_probs=109.8
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc--e--EEEcCCCCCcceeEEeec-CCcEEEEeCCCCeEEEEEcC
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK--E--RVIRHDSHGLEGLAVDWV-GRKLYWLDRHSKQLDVAELD 118 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~--~i~~~~~~~p~glavD~~-~~~LY~td~~~~~I~~~~ld 118 (573)
...+..|+|++.+..|+.+ ...+.|..+++..... + ..+......+..|++.+. .+.++++-...+.|.+.++.
T Consensus 11 ~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~ 89 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATC-SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEED 89 (351)
T ss_dssp SSCEEEEEECSSSSEEEEE-ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEC
T ss_pred ccceeEEEEcCCCCEEEEe-eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecC
Confidence 3458899999866655544 4567888888875321 1 112223356788888764 25555665567889998887
Q ss_pred CCc----------eeEeccCCCCcceEEEeCC--CceEEEEecCCcCeEEEEeccCCC-cEEE-----Ee-----cCCCC
Q psy952 119 GTN----------RKTLKTAIQDPRGITLHPG--IGYVYFSSWNLQAYIGKIGMDGSN-FTRI-----LT-----HEDDI 175 (573)
Q Consensus 119 g~~----------~~~l~~~~~~P~~Iavdp~--~g~LYwtd~~~~~~I~r~~ldG~~-~~~l-----~~-----~~~~l 175 (573)
... ...+.........|+++|. ..+|+.+. ....|...++.... ...+ +. .....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 90 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp TTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred CCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence 542 2223334456889999996 44555544 34566666654322 1110 00 00122
Q ss_pred CCCceEEEecc---CCeEEEEeCCCCeEEEEeCCCCcEEEEEe-CCccceeEEEeeeCC-----eEEEecCCCCceEEEe
Q psy952 176 AWPNALTLDYF---TERLYWADAHLDYIASVDLDGKHKHIVIS-GQKVPHVFALTLFED-----HIYWTDWNTKSINRAD 246 (573)
Q Consensus 176 ~~P~glaiD~~---~~~LYw~D~~~~~I~~~~~dG~~~~~l~~-~~~~~~p~~ia~~~~-----~lywtd~~~~~I~~~~ 246 (573)
.....+++.+. ...|..+. ..+.|............+.. ........+|++..+ .++++-...+.|...+
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred cceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 33456777765 44454444 34444333333333322322 111234567777543 5666665666666665
Q ss_pred ccCC
Q psy952 247 KFNG 250 (573)
Q Consensus 247 ~~~g 250 (573)
...+
T Consensus 247 ~~~~ 250 (351)
T 3f3f_A 247 ITEK 250 (351)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 4443
No 275
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.21 E-value=0.0072 Score=66.99 Aligned_cols=218 Identities=7% Similarity=0.008 Sum_probs=123.7
Q ss_pred ccEEEEEcCCCce---eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC--------------
Q psy952 25 YYVRNMSLDATQY---SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS-------------- 87 (573)
Q Consensus 25 ~~I~~i~l~g~~~---~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~-------------- 87 (573)
..|+.+++++... ..+. ..+..++|.+.++.|.++. .+.|+.+++.++....+...+.
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ 164 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYE 164 (719)
T ss_dssp EEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHH
T ss_pred eEEEEEECCCCccccceecC---cccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceee
Confidence 6788899987654 2221 3466788999888888874 4589998887665443332221
Q ss_pred ----CCcceeEEeecCCcEEEEeCCC---------------------------------CeEEEEEcCCCcee---Eec-
Q psy952 88 ----HGLEGLAVDWVGRKLYWLDRHS---------------------------------KQLDVAELDGTNRK---TLK- 126 (573)
Q Consensus 88 ----~~p~glavD~~~~~LY~td~~~---------------------------------~~I~~~~ldg~~~~---~l~- 126 (573)
....++++.+.++.|+++.... ..|.+.++++.... .+.
T Consensus 165 ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 244 (719)
T 1z68_A 165 EEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV 244 (719)
T ss_dssp HHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC
T ss_pred eecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC
Confidence 1224788888888887754211 15677777765431 221
Q ss_pred -----cCCCCcceEEEeCCCceEEEE--ecC-CcCeEEEEe----ccCCCcEEEE----ecCCC-CC--CCceEEEeccC
Q psy952 127 -----TAIQDPRGITLHPGIGYVYFS--SWN-LQAYIGKIG----MDGSNFTRIL----THEDD-IA--WPNALTLDYFT 187 (573)
Q Consensus 127 -----~~~~~P~~Iavdp~~g~LYwt--d~~-~~~~I~r~~----ldG~~~~~l~----~~~~~-l~--~P~glaiD~~~ 187 (573)
........+++.|. +.++++ +.. ....|+..+ +++...+.+. ..... +. .+..+++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 245 PAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp CHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 12223578899997 555554 211 124687777 5433222221 00111 11 11267888878
Q ss_pred CeEEEE-eC--CCCeEEEEeCCCCcEEEEEeCCccceeEEEee-eCCeEEEecCC------CCceEEEeccCC
Q psy952 188 ERLYWA-DA--HLDYIASVDLDGKHKHIVISGQKVPHVFALTL-FEDHIYWTDWN------TKSINRADKFNG 250 (573)
Q Consensus 188 ~~LYw~-D~--~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~-~~~~lywtd~~------~~~I~~~~~~~g 250 (573)
.+||+. .. +...|+.+++++...+.+..+. . ...++.. .++.||++... ...|++++..+|
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~-~-~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVENAIQITSGK-W-EAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTTCEECSCSS-S-CEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred CeEEEEEEccCCceEEEEEECCCCceEecccCc-e-EEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 877763 32 3347899998887655544332 1 1222222 56778887543 345777764444
No 276
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.20 E-value=0.19 Score=48.99 Aligned_cols=237 Identities=10% Similarity=0.000 Sum_probs=127.5
Q ss_pred CceeeCCCCCC-EEEEEe-cccEEEEEcCCCce--eec---cc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc
Q psy952 7 STCKRRDSIKP-WLIFSN-KYYVRNMSLDATQY--SLV---HQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE 78 (573)
Q Consensus 7 ~~C~~~~~~~~-~l~~s~-~~~I~~i~l~g~~~--~~~---~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 78 (573)
.+|.+.....+ +|+-+. ...|+..++..... ..+ +. ....+..++|.+.+..|+.. ...+.|+..+.....
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~~~ 119 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTTGT 119 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE-cccccceEEeecccc
Confidence 45665442223 444333 46788888764321 111 12 23457899999866665554 455678888877654
Q ss_pred ceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec--cCCCCcceEEEeCCCceEEEEecCCcCeEE
Q psy952 79 KERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK--TAIQDPRGITLHPGIGYVYFSSWNLQAYIG 156 (573)
Q Consensus 79 ~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~--~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~ 156 (573)
...........+..+.+.+.++.|+ +-...+.|.+.++.+.....+. ........+++.+.....++...+....|.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~-s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~ 198 (340)
T 4aow_A 120 TTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 198 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred eeeeecCCCCceeEEEEeecCccce-eecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEE
Confidence 4444433334555566655444444 4445667888887766554443 233446677777654443333223355676
Q ss_pred EEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEec
Q psy952 157 KIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTD 236 (573)
Q Consensus 157 r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd 236 (573)
..++......... ...-.....|++.+.+..|+. -...+.|...++............ .....+++..+..+++-
T Consensus 199 i~d~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s-~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 199 VWNLANCKLKTNH--IGHTGYLNTVTVSPDGSLCAS-GGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCA 273 (340)
T ss_dssp EEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEE-EETTCEEEEEETTTTEEEEEEECS--SCEEEEEECSSSSEEEE
T ss_pred EEECCCCceeeEe--cCCCCcEEEEEECCCCCEEEE-EeCCCeEEEEEeccCceeeeecCC--ceEEeeecCCCCceeec
Confidence 6666554433333 222334468899876555544 445678888888765543333332 23455555433333333
Q ss_pred CCCCceEEEeccCC
Q psy952 237 WNTKSINRADKFNG 250 (573)
Q Consensus 237 ~~~~~I~~~~~~~g 250 (573)
...+.|...+..++
T Consensus 274 ~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 274 ATGPSIKIWDLEGK 287 (340)
T ss_dssp EETTEEEEEETTTT
T ss_pred cCCCEEEEEECCCC
Confidence 33455655554333
No 277
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.20 E-value=0.26 Score=50.59 Aligned_cols=232 Identities=9% Similarity=0.042 Sum_probs=131.1
Q ss_pred ceeeCCCCCCEEEEE-ecccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 8 TCKRRDSIKPWLIFS-NKYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s-~~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
+|.... ..+|+.+ ..+.|+..++...... .+......+..++++ .+ ++++-...+.|...++........+..
T Consensus 123 ~~~~~~--g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~ 197 (445)
T 2ovr_B 123 TCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGECIHTLYG 197 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEc--CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCcEEEEECC
Confidence 454433 2344443 3567888888754433 333334557788887 33 555555677899999876544333433
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
....+..++++ .+. +++-...+.|.+.++.... ...+.........++++ ..+|+... ....|...++....
T Consensus 198 h~~~v~~~~~~--~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 198 HTSTVRCMHLH--EKR-VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGA--YDFMVKVWDPETET 270 (445)
T ss_dssp CSSCEEEEEEE--TTE-EEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEE--TTSCEEEEEGGGTE
T ss_pred CCCcEEEEEec--CCE-EEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEc--CCCEEEEEECCCCc
Confidence 33456667765 444 4555567899999987543 33343444456677774 34555544 24567666665433
Q ss_pred cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEE
Q psy952 165 FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINR 244 (573)
Q Consensus 165 ~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~ 244 (573)
....+ ...-.....+++ .+..|+.+ ...+.|...++..........+. .....++++.++.|+. -...+.|..
T Consensus 271 ~~~~~--~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~-~~~dg~i~v 343 (445)
T 2ovr_B 271 CLHTL--QGHTNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNILVS-GNADSTVKI 343 (445)
T ss_dssp EEEEE--CCCSSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTCCEEEEECCC-CSCEEEEEEETTEEEE-EETTSCEEE
T ss_pred EeEEe--cCCCCceEEEEE--CCCEEEEE-eCCCeEEEEECCCCCEEEEEcCC-cccEEEEEEeCCEEEE-EeCCCeEEE
Confidence 22222 222222345555 35555444 45678888888654443333332 3445667766665444 445677887
Q ss_pred EeccCCcceEEEcc
Q psy952 245 ADKFNGRDYRVLRN 258 (573)
Q Consensus 245 ~~~~~g~~~~~l~~ 258 (573)
.+..+++....+..
T Consensus 344 wd~~~~~~~~~~~~ 357 (445)
T 2ovr_B 344 WDIKTGQCLQTLQG 357 (445)
T ss_dssp EETTTCCEEEEECS
T ss_pred EECCCCcEEEEEcc
Confidence 77777766665543
No 278
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.20 E-value=0.22 Score=49.66 Aligned_cols=180 Identities=13% Similarity=0.016 Sum_probs=106.2
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeec-CCcEEEEeCCCCeEEEEEcCCCc-
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWV-GRKLYWLDRHSKQLDVAELDGTN- 121 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~-~~~LY~td~~~~~I~~~~ldg~~- 121 (573)
...+.+++|.+....|+-+ ...+.|...++........+......+..+++.+. .++++++-...+.|.+.++....
T Consensus 154 ~~~v~~~~~~~~~~~l~t~-s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 154 TNYLSACSFTNSDMQILTA-SGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC 232 (354)
T ss_dssp SSCEEEEEECSSSSEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE
T ss_pred CCcEEEEEEeCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 3457789998766666544 45678999998765443333333345666777654 34666666677899999986543
Q ss_pred eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEE
Q psy952 122 RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIA 201 (573)
Q Consensus 122 ~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~ 201 (573)
..++........+|+++|...+|+... ....|...++.......+............+++.+.+..|+.+ ...+.|.
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g-~~d~~i~ 309 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGDAFASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG-YNDYTIN 309 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSCEE
T ss_pred EEEecCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE-ECCCcEE
Confidence 333434455688999999655554443 3456776776554333333111122234678888665555544 4567788
Q ss_pred EEeCCCCcEEEEEeCCccceeEEEeee
Q psy952 202 SVDLDGKHKHIVISGQKVPHVFALTLF 228 (573)
Q Consensus 202 ~~~~dG~~~~~l~~~~~~~~p~~ia~~ 228 (573)
..++........+.+. ......|++.
T Consensus 310 vwd~~~~~~~~~l~~h-~~~v~~l~~s 335 (354)
T 2pbi_B 310 VWDVLKGSRVSILFGH-ENRVSTLRVS 335 (354)
T ss_dssp EEETTTCSEEEEECCC-SSCEEEEEEC
T ss_pred EEECCCCceEEEEECC-CCcEEEEEEC
Confidence 8887543333333332 3345667763
No 279
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.19 E-value=0.14 Score=57.55 Aligned_cols=220 Identities=7% Similarity=0.024 Sum_probs=129.7
Q ss_pred CEEEEEe-cccEEEEEcCCCceeeccc---------CCcceEEEEEEcCCCE-EEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 17 PWLIFSN-KYYVRNMSLDATQYSLVHQ---------DLLNVVAMDFHYKENR-FYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~~~~~~---------~~~~~~~v~~d~~~~~-ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
.-|.++. ...|.+++.....+..... ....+.+|..|. .+. ||+.- ..+.|++++..+.....+...
T Consensus 368 g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt-~~~Gl~~~d~~~~~~~~~~~~ 445 (795)
T 4a2l_A 368 KNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGT-HAGGLSILHRNSGQVENFNQR 445 (795)
T ss_dssp SCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEE-TTTEEEEEETTTCCEEEECTT
T ss_pred CCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEe-CcCceeEEeCCCCcEEEeecC
Confidence 3344444 3478888876554433211 124578898885 556 66654 445689999876554433221
Q ss_pred ----CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc-----CC--CCcceEEEeCCCceEEEEecCCcCe
Q psy952 86 ----DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT-----AI--QDPRGITLHPGIGYVYFSSWNLQAY 154 (573)
Q Consensus 86 ----~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~-----~~--~~P~~Iavdp~~g~LYwtd~~~~~~ 154 (573)
....+..|+.|. .++||++-. +.|.+++......+.+.. .+ ...+.|+.|+ .|.||+... ..
T Consensus 446 ~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~---~G 518 (795)
T 4a2l_A 446 NSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGE---EG 518 (795)
T ss_dssp TSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEES---SC
T ss_pred CCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeC---Cc
Confidence 123577888885 567887765 458888877654443331 12 3467888987 678887763 45
Q ss_pred EEEEeccCCCcEEEEe--cCCCC--CCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCcc--ceeEEEeee
Q psy952 155 IGKIGMDGSNFTRILT--HEDDI--AWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKV--PHVFALTLF 228 (573)
Q Consensus 155 I~r~~ldG~~~~~l~~--~~~~l--~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~--~~p~~ia~~ 228 (573)
|.+.+.+.... .+.. ....+ ....+|+.| .+++||++..+ .|.+++......+.+.....+ ....+|+.+
T Consensus 519 l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d-~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d 594 (795)
T 4a2l_A 519 LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEA-SNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNNVVYGILED 594 (795)
T ss_dssp EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEEC-TTSCEEEEESS--CEEEEETTTTEEEEECGGGTCSCSCEEEEEEC
T ss_pred eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEEC-CCCCEEEEeCC--CceeECCCCCcEEEeCCCCCCchhheEEEEEC
Confidence 88877765433 2210 01112 123567777 46788887654 688888876554443321112 235677776
Q ss_pred -CCeEEEecCCCCceEEEeccCCc
Q psy952 229 -EDHIYWTDWNTKSINRADKFNGR 251 (573)
Q Consensus 229 -~~~lywtd~~~~~I~~~~~~~g~ 251 (573)
++.||++- .+.|.++++.+++
T Consensus 595 ~~g~lWi~t--~~Gl~~~~~~~~~ 616 (795)
T 4a2l_A 595 SFGRLWLST--NRGISCFNPETEK 616 (795)
T ss_dssp TTSCEEEEE--TTEEEEEETTTTE
T ss_pred CCCCEEEEc--CCceEEEcCCCCc
Confidence 46777765 3678888765543
No 280
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.19 E-value=0.21 Score=49.36 Aligned_cols=234 Identities=9% Similarity=0.010 Sum_probs=134.0
Q ss_pred CEEEEEe-cccEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc--e--EEEcCCCCCc
Q psy952 17 PWLIFSN-KYYVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK--E--RVIRHDSHGL 90 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~--~i~~~~~~~p 90 (573)
.+|+-+. ...|+..++..... ..+......+..++|.+..+.|.... ..+.|..+++..... . ..+......+
T Consensus 68 ~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v 146 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-LDNICSIYNLKTREGNVRVSRELAGHTGYL 146 (340)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTCSBSCEEEEEEECCSSCE
T ss_pred CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe-CCCeEEEEECccCCCcceeEEEecCCCccE
Confidence 3444433 46788888765433 22223344578999998766655544 567888888765321 1 1122223455
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~ 169 (573)
..+++.. .+. +++-...+.|.+.++..... .++.........|++.|... ++++-. ....|...++........+
T Consensus 147 ~~~~~~~-~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~-~d~~v~~wd~~~~~~~~~~ 222 (340)
T 1got_B 147 SCCRFLD-DNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGA-CDASAKLWDVREGMCRQTF 222 (340)
T ss_dssp EEEEEEE-TTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEE-TTSCEEEEETTTCSEEEEE
T ss_pred EEEEECC-CCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-EEEEEe-CCCcEEEEECCCCeeEEEE
Confidence 6666653 334 44555677899988865443 33434455678999999544 444432 3556777776544433333
Q ss_pred ecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC-CccceeEEEeee-CCeEEEecCCCCceEEEec
Q psy952 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVFALTLF-EDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 170 ~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~-~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~ 247 (573)
...-.....|++.+.+..|. +-...+.|...++........... ........|++. .+.++.+-...+.|...+.
T Consensus 223 --~~h~~~v~~v~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 223 --TGHESDINAICFFPNGNAFA-TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp --CCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred --cCCcCCEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 23334457899987655544 445667888888875443333321 112235667763 4556666556677777776
Q ss_pred cCCcceEEEcc
Q psy952 248 FNGRDYRVLRN 258 (573)
Q Consensus 248 ~~g~~~~~l~~ 258 (573)
.++....++..
T Consensus 300 ~~~~~~~~~~~ 310 (340)
T 1got_B 300 LKADRAGVLAG 310 (340)
T ss_dssp TTCCEEEEEEC
T ss_pred ccCcEeeEeec
Confidence 66665555543
No 281
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=0.1 Score=58.35 Aligned_cols=216 Identities=9% Similarity=0.060 Sum_probs=130.0
Q ss_pred CEEEEEe-cccEEEEEcCCCceeeccc---CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCC-----C
Q psy952 17 PWLIFSN-KYYVRNMSLDATQYSLVHQ---DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHD-----S 87 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~~~~~~---~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~-----~ 87 (573)
.-|.++. ...|.+++.....++.... ....+.+|..|. .+.||++.. +.|++++..+...+.+.... .
T Consensus 418 g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 418 GNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp SCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCeEEecccCccccccc
Confidence 3444454 3677777776554443321 234577888884 678888765 56999998765554443221 2
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec--cCC--CCcceEEEeCCCceEEEEecCCcCeE-EEEeccC
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK--TAI--QDPRGITLHPGIGYVYFSSWNLQAYI-GKIGMDG 162 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~--~~~--~~P~~Iavdp~~g~LYwtd~~~~~~I-~r~~ldG 162 (573)
..+.+|+.|. .++|+++-... .|.+++.++...+.+. .++ ....+|+.|+ .|.||++.. ..| .+.+...
T Consensus 495 ~~i~~i~~d~-~g~lWigt~~~-Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T~---~Glv~~~d~~~ 568 (781)
T 3v9f_A 495 NFVRSIAQDS-EGRFWIGTFGG-GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS-KGQMWLATG---EGLVCFPSARN 568 (781)
T ss_dssp SCEEEEEECT-TCCEEEEESSS-CEEEECTTCCEEEEECTTTTCSCSCEEEEEECT-TSCEEEEET---TEEEEESCTTT
T ss_pred ceeEEEEEcC-CCCEEEEEcCC-CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC-CCCEEEEEC---CCceEEECCCC
Confidence 4677888885 66787776433 4888888766555443 233 2367888887 678887762 345 7777665
Q ss_pred CCcEEEEecCCCCC--CCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccc----eeEEEeee-CCeEEEe
Q psy952 163 SNFTRILTHEDDIA--WPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVP----HVFALTLF-EDHIYWT 235 (573)
Q Consensus 163 ~~~~~l~~~~~~l~--~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~----~p~~ia~~-~~~lywt 235 (573)
...+.+.. ...|. ...+|+.| .+++||++. .+.|.+++++....+.+.....++ .+.++... ++.||+.
T Consensus 569 ~~~~~~~~-~~gl~~~~i~~i~~d-~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 644 (781)
T 3v9f_A 569 FDYQVFQR-KEGLPNTHIRAISED-KNGNIWAST--NTGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFG 644 (781)
T ss_dssp CCCEEECG-GGTCSCCCCCEEEEC-SSSCEEEEC--SSCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEE
T ss_pred CcEEEccc-cCCCCCceEEEEEEC-CCCCEEEEc--CCceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEE
Confidence 54444331 22232 24688888 578888875 345888998866555543211122 23355554 5778887
Q ss_pred cCCCCceEEEec
Q psy952 236 DWNTKSINRADK 247 (573)
Q Consensus 236 d~~~~~I~~~~~ 247 (573)
-. +.+.++++
T Consensus 645 ~~--~Gl~~f~p 654 (781)
T 3v9f_A 645 SI--NGLCFFNP 654 (781)
T ss_dssp ET--TEEEEECS
T ss_pred CC--CceEEECh
Confidence 53 34666664
No 282
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.15 E-value=0.04 Score=60.91 Aligned_cols=184 Identities=15% Similarity=0.168 Sum_probs=111.9
Q ss_pred cEEEEEcCCCce--eecccCCc----ceEEEEEEcCCCEEEEEECC---CCeEEEEEcCCC--cceEEEcCCCCCcceeE
Q psy952 26 YVRNMSLDATQY--SLVHQDLL----NVVAMDFHYKENRFYFADVA---AKTIYRSRVGST--EKERVIRHDSHGLEGLA 94 (573)
Q Consensus 26 ~I~~i~l~g~~~--~~~~~~~~----~~~~v~~d~~~~~ly~~d~~---~~~I~~~~~~g~--~~~~i~~~~~~~p~gla 94 (573)
.|++..+..... .++..... ...++.+.+.++.|+++... ...|+.+++++. ....+.. ........
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~-~~~~~~~~- 286 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG-DLDADVSL- 286 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC-SSSSCEEE-
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC-CCCceEEE-
Confidence 478877764332 33333222 35688899988888876542 358999998765 3344433 32222222
Q ss_pred EeecCCcEEEEeCC---CCeEEEEEcCCCce---eEeccCCCCcceEEEeCCCceEEEEecC-CcCeEEEEeccCCCcEE
Q psy952 95 VDWVGRKLYWLDRH---SKQLDVAELDGTNR---KTLKTAIQDPRGITLHPGIGYVYFSSWN-LQAYIGKIGMDGSNFTR 167 (573)
Q Consensus 95 vD~~~~~LY~td~~---~~~I~~~~ldg~~~---~~l~~~~~~P~~Iavdp~~g~LYwtd~~-~~~~I~r~~ldG~~~~~ 167 (573)
+++.++.||+.-.. +.+|.++++++... +.|+..-.... .+++..++|+++... ...+|++.+++|...+.
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 56678888886432 47899999987543 45554322222 566667778777532 24579999999876554
Q ss_pred EEecCCCCCCCceEEEeccCCeEEEEeCC---CCeEEEEeCCCCcEEEEEe
Q psy952 168 ILTHEDDIAWPNALTLDYFTERLYWADAH---LDYIASVDLDGKHKHIVIS 215 (573)
Q Consensus 168 l~~~~~~l~~P~glaiD~~~~~LYw~D~~---~~~I~~~~~dG~~~~~l~~ 215 (573)
+. ......-.+++.++.+++|+++-.. -..|+.+++.+...+++..
T Consensus 365 l~--~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 365 VA--LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp EC--CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEEC
T ss_pred ee--cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEe
Confidence 43 2222222355556667788776432 3689999998777766654
No 283
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.15 E-value=0.19 Score=49.30 Aligned_cols=205 Identities=10% Similarity=0.076 Sum_probs=122.6
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce-----EEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE-----RVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG 119 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-----~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg 119 (573)
..+..|+|.+....++++-...+.|+..++.+.... ..+......+..+++.+.++.| ++-...+.|.+.++..
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l-~s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA-LSASWDKTLRLWDVAT 96 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEE-EEEeCCCEEEEEECCC
Confidence 447788998777677777777788887777543211 1122233567788888655444 4545678899999864
Q ss_pred Cc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEecc-----CCeEEEE
Q psy952 120 TN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYF-----TERLYWA 193 (573)
Q Consensus 120 ~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~-----~~~LYw~ 193 (573)
.. ...+.........|+++|...+|+-.. ....|..-++.+.....+. ..-.....+++.+. ++.++++
T Consensus 97 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~vwd~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~l~s 171 (319)
T 3frx_A 97 GETYQRFVGHKSDVMSVDIDKKASMIISGS--RDKTIKVWTIKGQCLATLL---GHNDWVSQVRVVPNEKADDDSVTIIS 171 (319)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSCEEEEEE--TTSCEEEEETTSCEEEEEC---CCSSCEEEEEECCC------CCEEEE
T ss_pred CCeeEEEccCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEe---ccCCcEEEEEEccCCCCCCCccEEEE
Confidence 43 344445555688999999655554443 3456777777765444433 22233455666543 2335555
Q ss_pred eCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 194 DAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 194 D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
-...+.|...++........+.+. ......|++. ++.++.+-...+.|..-+..+++....+
T Consensus 172 ~~~d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 172 AGNDKMVKAWNLNQFQIEADFIGH-NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC-CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EeCCCEEEEEECCcchhheeecCC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 556677888887655443333332 3345677774 4556666556677777776666554444
No 284
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.12 E-value=0.19 Score=49.36 Aligned_cols=117 Identities=11% Similarity=0.049 Sum_probs=77.8
Q ss_pred CCcceEEEEEEcCC--CEEEEEECCCCeEEEEEcCC-C-cceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC
Q psy952 43 DLLNVVAMDFHYKE--NRFYFADVAAKTIYRSRVGS-T-EKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD 118 (573)
Q Consensus 43 ~~~~~~~v~~d~~~--~~ly~~d~~~~~I~~~~~~g-~-~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld 118 (573)
....+..|+|.+.. +.++++-...+.|+.+++.. . .....+......+..|++.+.++.|+.+ ...+.|.+.++.
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~ 116 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA-SCDKTAKMWDLS 116 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSEEEEEETT
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE-cCCCcEEEEEcC
Confidence 34568899999876 67677766778888888875 2 2212333334678889998755555544 456789999998
Q ss_pred CCceeEeccCCCCcceEEE--eCCCceEEEEecCCcCeEEEEeccC
Q psy952 119 GTNRKTLKTAIQDPRGITL--HPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 119 g~~~~~l~~~~~~P~~Iav--dp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
......+.........|++ ++...+|+.+. ....|...++..
T Consensus 117 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~ 160 (368)
T 3mmy_A 117 SNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS--WDKTLKFWDTRS 160 (368)
T ss_dssp TTEEEEEEECSSCEEEEEEEECSSCEEEEEEE--TTSEEEEECSSC
T ss_pred CCCceeeccccCceEEEEEEeCCCCCEEEEcc--CCCcEEEEECCC
Confidence 7766555555566788988 77444444443 345677766653
No 285
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.11 E-value=0.027 Score=56.49 Aligned_cols=232 Identities=13% Similarity=0.003 Sum_probs=121.7
Q ss_pred CCceeeCCCCCCEEEEE-ecccEEEEEcCCCc--ee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc---
Q psy952 6 ESTCKRRDSIKPWLIFS-NKYYVRNMSLDATQ--YS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE--- 78 (573)
Q Consensus 6 g~~C~~~~~~~~~l~~s-~~~~I~~i~l~g~~--~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~--- 78 (573)
..+|.+......+|+.+ ....|+..++.+.. .. .+......+..|+|.+.++.|+.+. ..+.|+.+++....
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-TTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCcee
Confidence 34555544333456555 35677777776552 22 2222344588999998766665554 55678888876544
Q ss_pred ceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc----eeEecc-CCCCcceEEEeCCCceEEEEecCCcC
Q psy952 79 KERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN----RKTLKT-AIQDPRGITLHPGIGYVYFSSWNLQA 153 (573)
Q Consensus 79 ~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~----~~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~ 153 (573)
....+......+..|++.+.++.|+.+. ..+.|.+.+++... .+.+.. .......|+++|...+|+.... ..
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~ 168 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA--DR 168 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES--SS
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC--CC
Confidence 2222222335678888887666666554 46788888887654 334443 4556889999996655655542 34
Q ss_pred eEEEEeccCC----------------CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcE-----EE
Q psy952 154 YIGKIGMDGS----------------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHK-----HI 212 (573)
Q Consensus 154 ~I~r~~ldG~----------------~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~-----~~ 212 (573)
.|...++... ..+.+.. ...-.....+++.+.+..|+.+. ..+.|...++..... ..
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE-YPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC-CCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEECSTTSCEEECCC
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhc-ccCCceEEEEEECCCCCEEEEEe-CCCcEEEEECCCCCCcceeeEe
Confidence 5555554311 1122221 11222346888987766666654 456777777665433 22
Q ss_pred EEeCCccceeEEEeee-CCeEEEecCCCCceEEEe
Q psy952 213 VISGQKVPHVFALTLF-EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 213 l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~ 246 (573)
+. .. .....+|++. ++.++.+-.. +.+...+
T Consensus 247 ~~-~~-~~~v~~~~~s~~~~~l~~~~~-~~~~~~~ 278 (377)
T 3dwl_C 247 VK-LS-QLPLRSLLWANESAIVAAGYN-YSPILLQ 278 (377)
T ss_dssp EE-CS-SSCEEEEEEEETTEEEEEESS-SSEEEEC
T ss_pred ec-CC-CCceEEEEEcCCCCEEEEEcC-CcEEEEE
Confidence 22 21 2345677763 4444444433 3333443
No 286
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.10 E-value=0.31 Score=49.70 Aligned_cols=233 Identities=9% Similarity=-0.005 Sum_probs=132.6
Q ss_pred CCEEEEEecccEEEEEcCCCceeeccc---CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcce
Q psy952 16 KPWLIFSNKYYVRNMSLDATQYSLVHQ---DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEG 92 (573)
Q Consensus 16 ~~~l~~s~~~~I~~i~l~g~~~~~~~~---~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~g 92 (573)
...|.++..+.|+..++...+...+.. ....+.+|+|.+.++.|. +-...+.|...++........+......+..
T Consensus 116 ~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la-sgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 116 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA-VGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE-EEECCCeEEEEEcCCCcEEEEEeCCCCceEE
Confidence 457777778889999987655433322 234588999998665555 4456678988998765433333322234444
Q ss_pred eEEeecCCcEEEEeCCCCeEEEEEcCCCce--eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCc----E
Q psy952 93 LAVDWVGRKLYWLDRHSKQLDVAELDGTNR--KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF----T 166 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~~I~~~~ldg~~~--~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~----~ 166 (573)
+ .|.. .+..+-...+.|...+...... .++........+++..|...+|.... ....|...++..... .
T Consensus 195 ~--s~~~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~--~D~~v~i~~~~~~~~~~~~~ 269 (420)
T 4gga_A 195 L--SWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG--NDNLVNVWPSAPGEGGWVPL 269 (420)
T ss_dssp E--EEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEESSCCSSCSCCS
T ss_pred E--eeCC-CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeee--ccccceEEeeccccccceee
Confidence 4 4433 4555555667888877664433 23334555678888888655554443 234455444432211 1
Q ss_pred EEEecCCCCCCCceEEEeccCCeEEEEe--CCCCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEEec-CCCCc
Q psy952 167 RILTHEDDIAWPNALTLDYFTERLYWAD--AHLDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTD-WNTKS 241 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~~LYw~D--~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lywtd-~~~~~ 241 (573)
... .........+++.+....++.+- ...+.|...++........+.. ......+.+ .++.|+.+- ...+.
T Consensus 270 ~~~--~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 270 QTF--TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp EEE--CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred eee--cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCCCE
Confidence 111 12223345778877776666543 2356787778765544333332 234555555 345565553 34567
Q ss_pred eEEEeccCCcceEEEcc
Q psy952 242 INRADKFNGRDYRVLRN 258 (573)
Q Consensus 242 I~~~~~~~g~~~~~l~~ 258 (573)
|...+..+++.+..+..
T Consensus 346 I~iwd~~~~~~v~~l~g 362 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKG 362 (420)
T ss_dssp EEEEETTTCCEEEEECC
T ss_pred EEEEECCCCcEEEEEcC
Confidence 77777667776666544
No 287
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.09 E-value=0.34 Score=49.88 Aligned_cols=225 Identities=12% Similarity=0.053 Sum_probs=125.4
Q ss_pred EEEEEe-cccEEEEEcCCCceeecc-cCCcceEEEEEEc-CCCEEEEEECCCCeEEEEEcCCCcceE-------------
Q psy952 18 WLIFSN-KYYVRNMSLDATQYSLVH-QDLLNVVAMDFHY-KENRFYFADVAAKTIYRSRVGSTEKER------------- 81 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~~~~-~~~~~~~~v~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~------------- 81 (573)
+|+.+. ...|+..++........+ .....+..|++.+ .++.++++-...+.|...++.......
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 444433 567888888755433333 3445577888885 345666666677788888876543211
Q ss_pred ----------EEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eEeccCCCCcceEEEeCCCceEEEEecC
Q psy952 82 ----------VIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWN 150 (573)
Q Consensus 82 ----------i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~ 150 (573)
.+......+. ++.+.++.|+.+ ...+.|.+.++..... ..+.........++++|...+|+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~-- 329 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVR--TVSGHGNIVVSG-SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS-- 329 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEE--EEEEETTEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE--
T ss_pred ccCCCeEEEEEccCccceEE--EEcCCCCEEEEE-eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe--
Confidence 1111112233 334444555444 4567899999865443 33334455688999999766666554
Q ss_pred CcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCC
Q psy952 151 LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFED 230 (573)
Q Consensus 151 ~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~ 230 (573)
..+.|...++........+ ...-.....|+++ +.. .++-...+.|...++...................+...+.
T Consensus 330 ~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~--~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTL--QGHTALVGLLRLS--DKF-LVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDN 404 (464)
T ss_dssp TTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEC--SSE-EEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSS
T ss_pred CCCcEEEEECCCCcEEEEE--eCCCCcEEEEEEc--CCE-EEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCC
Confidence 3566777777543332223 2333334566665 444 4444566788888887655544443221222223333344
Q ss_pred eEEEecCCCCceEEEeccCCcceE
Q psy952 231 HIYWTDWNTKSINRADKFNGRDYR 254 (573)
Q Consensus 231 ~lywtd~~~~~I~~~~~~~g~~~~ 254 (573)
.|.... .+.|...+..+|+...
T Consensus 405 ~l~~~~--dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 405 ILVSGS--ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEEEEE--TTEEEEEETTTCCEEE
T ss_pred EEEEec--CCeEEEEECCCCcEEe
Confidence 444433 5677777766766444
No 288
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.08 E-value=0.31 Score=49.30 Aligned_cols=218 Identities=9% Similarity=0.085 Sum_probs=124.2
Q ss_pred CEEEEEe-cccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeE
Q psy952 17 PWLIFSN-KYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLA 94 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gla 94 (573)
.+|+.+. ...|+..++........+. ....+.+|+|.+....|+ +-...+.|...++........+.. -..+..++
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~ 213 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVA 213 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEEEC-SSCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCeeEEEEEc-CCCcEEEE
Confidence 4555443 4678888887665433333 344588999998776665 445667899999876544333332 24677788
Q ss_pred EeecCCcEEEEeCCCCeEEEEEcCCCc-eeEec-------cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC--
Q psy952 95 VDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLK-------TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN-- 164 (573)
Q Consensus 95 vD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~-------~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~-- 164 (573)
+.+..++++++-...+.|.+.++.... ...+. .......+|+++|...+|+-.. ....|...++....
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s--~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS--LDRSVKLWNLQNANNK 291 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEEC------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe--CCCEEEEEECCCCCCc
Confidence 887566777776677889998886543 23331 1233478899999666665444 24555555553211
Q ss_pred -----------cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeC----
Q psy952 165 -----------FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE---- 229 (573)
Q Consensus 165 -----------~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~---- 229 (573)
...+. ..-.....+++.+.+..|+ +-...+.|...++........+.+. .....++++..
T Consensus 292 ~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~l~~h-~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYI---GHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSGNPLLMLQGH-RNSVISVAVANGSSL 366 (393)
T ss_dssp ---------CEEEEEE---CCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECSSCTT
T ss_pred ccccCCCCCcceEEEe---cccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCCCeEEEEECCC-CCCEEEEEecCCcCc
Confidence 11111 2222345677776555544 4445667777777654443333332 23455666542
Q ss_pred ---CeEEEecCCCCceE
Q psy952 230 ---DHIYWTDWNTKSIN 243 (573)
Q Consensus 230 ---~~lywtd~~~~~I~ 243 (573)
+.+++|-...+.|.
T Consensus 367 ~p~~~~l~sgs~Dg~i~ 383 (393)
T 1erj_A 367 GPEYNVFATGSGDCKAR 383 (393)
T ss_dssp CTTCEEEEEEETTSEEE
T ss_pred CCCCCEEEEECCCCcEE
Confidence 34555544444443
No 289
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=97.06 E-value=0.00023 Score=81.13 Aligned_cols=42 Identities=36% Similarity=0.962 Sum_probs=36.2
Q ss_pred CcCCCceeeCCCCceecCCcCcCCCCCCCCCCCCCCCCCCC--CCCCC
Q psy952 524 TCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ--RTCPQ 569 (573)
Q Consensus 524 ~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDe~~~~c~~--~~c~~ 569 (573)
.|. +.|+|.+| +||+..|+|||++||+|+|||. +|.. ..|..
T Consensus 118 ~C~-~~F~C~~g-~ci~~~~~c~g~~dC~d~sde~--~C~~~~~~C~~ 161 (913)
T 3t5o_A 118 DCK-NKFRCDSG-RCIARKLECNGENDCGDNSDER--DCGRTKAVCTR 161 (913)
T ss_dssp CCS-SEEECTTS-CEEEGGGSSSSSCCSSSSGGGT--TCSSCCCSSSS
T ss_pred Ccc-cccccCCC-ceEccceecCCcccCCCccccc--cCCCCCCcccc
Confidence 453 67999998 9999999999999999999998 8975 34754
No 290
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.04 E-value=0.33 Score=53.36 Aligned_cols=76 Identities=9% Similarity=-0.008 Sum_probs=47.6
Q ss_pred ceEEEeccCCeEEEEeCC------------------------------------------CCeEEEEeCCCCcEE-EEEe
Q psy952 179 NALTLDYFTERLYWADAH------------------------------------------LDYIASVDLDGKHKH-IVIS 215 (573)
Q Consensus 179 ~glaiD~~~~~LYw~D~~------------------------------------------~~~I~~~~~dG~~~~-~l~~ 215 (573)
.++++|+..+.||+.... .+.|..+|+...... .+..
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~ 475 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH 475 (677)
T ss_dssp SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC
Confidence 478999999999986321 156777777543332 2222
Q ss_pred CCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 216 GQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 216 ~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
+. ...--.++..++.||+. ...+.|+.++..+|+.+..+
T Consensus 476 ~~-~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 476 VS-PWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp SS-SCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEE
T ss_pred CC-CCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeee
Confidence 21 01112244567788887 46788999998888876554
No 291
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.04 E-value=0.28 Score=49.40 Aligned_cols=198 Identities=8% Similarity=0.053 Sum_probs=116.5
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC-----CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC--
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH-----DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD-- 118 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~-----~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld-- 118 (573)
.+..+.|.+..+..+++-...+.|...++.......++.. ....+..+++....++++++-...+.|.+.++.
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 3556777776666666777778898888876544333321 123556677766677888888888899999986
Q ss_pred CCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecC-----CCCCCCceEEEeccCCeEEEE
Q psy952 119 GTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE-----DDIAWPNALTLDYFTERLYWA 193 (573)
Q Consensus 119 g~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~-----~~l~~P~glaiD~~~~~LYw~ 193 (573)
+....++.........|+++|.. .++++- +....|...++........+... ..+.....+++.+.+..|+ +
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~-s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~ 315 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDG-QRFGTG-SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF-A 315 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTS-SEEEEE-CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE-E
T ss_pred CcceEEECCcCCCeEEEEEecCC-CeEEEE-cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE-E
Confidence 23344444555568899999954 444554 23566777777644333333101 1122346889987555554 4
Q ss_pred eCCCCeEEEEeCCCCcEEEEEe---CCccceeEEEeee-CCeEEEecCCCCceEEEe
Q psy952 194 DAHLDYIASVDLDGKHKHIVIS---GQKVPHVFALTLF-EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 194 D~~~~~I~~~~~dG~~~~~l~~---~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~ 246 (573)
-...+.|...+.........+. .........|++. ++.+++|-...+.|..-+
T Consensus 316 g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 316 GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 5567788888876544332221 1112234566663 344555544555554433
No 292
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.03 E-value=0.15 Score=55.24 Aligned_cols=205 Identities=9% Similarity=0.035 Sum_probs=121.0
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC-Cc-
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG-TN- 121 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg-~~- 121 (573)
-+.+..|+|++.++.|..+. .+.|+..++.......++......+..+++.+.++.| .+-...+.|.+-++.. ..
T Consensus 18 ~g~~~~~~~spdg~~l~~~~--~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~~ 94 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN--GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHI 94 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE--TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCC
T ss_pred cCceeEEeeCCCCCEEEeCC--CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcce
Confidence 34577889999888887765 3478888886544433444344678889999865544 4444567888888753 22
Q ss_pred -eeEeccCCCCcceEEEeCCCceEEEEecCCc--CeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCC
Q psy952 122 -RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQ--AYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD 198 (573)
Q Consensus 122 -~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~--~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~ 198 (573)
...+........+|+++|...+|..+..... ..|...+. |.....+. ..-...+.+++.+.+..++.+-...+
T Consensus 95 ~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l~---gh~~~v~~v~f~p~~~~~l~s~s~D~ 170 (611)
T 1nr0_A 95 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNLT---GQARAMNSVDFKPSRPFRIISGSDDN 170 (611)
T ss_dssp EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCCC---CCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCcceec---CCCCCceEEEECCCCCeEEEEEeCCC
Confidence 1222233345789999997777765543221 23433332 22222221 22234568888876665566666667
Q ss_pred eEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 199 YIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 199 ~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
.|...+.........+.+. .....+|++. ++.++.+-...+.|..-+..+|+...++
T Consensus 171 ~v~lwd~~~~~~~~~l~~H-~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEH-TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp CEEEEETTTBEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred eEEEEECCCCeEeeeeccc-cCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 7777775543322223332 3456777774 4556666666677777776666655544
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.98 E-value=0.15 Score=56.77 Aligned_cols=195 Identities=7% Similarity=-0.050 Sum_probs=115.7
Q ss_pred ceEEEEEE-cCCCEEEEEECCCC----eEEEEEcCCC-cceEEEcCCCC-CcceeEEeecCCcEEEEeCCC----CeEEE
Q psy952 46 NVVAMDFH-YKENRFYFADVAAK----TIYRSRVGST-EKERVIRHDSH-GLEGLAVDWVGRKLYWLDRHS----KQLDV 114 (573)
Q Consensus 46 ~~~~v~~d-~~~~~ly~~d~~~~----~I~~~~~~g~-~~~~i~~~~~~-~p~glavD~~~~~LY~td~~~----~~I~~ 114 (573)
...++.+. +.+++|.|+....+ .|++++++++ .. +...+. ...+++..+.++.||++.... .+|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 46678899 88887777654332 5999999876 42 111111 134566666677788875321 37899
Q ss_pred EEcCCCce--eEecc--CCCCcceEEEeCCCceEEEEecC-CcCeEEEEeccCCC--c--EEEEecCCCCCCCceEEEe-
Q psy952 115 AELDGTNR--KTLKT--AIQDPRGITLHPGIGYVYFSSWN-LQAYIGKIGMDGSN--F--TRILTHEDDIAWPNALTLD- 184 (573)
Q Consensus 115 ~~ldg~~~--~~l~~--~~~~P~~Iavdp~~g~LYwtd~~-~~~~I~r~~ldG~~--~--~~l~~~~~~l~~P~glaiD- 184 (573)
.++.+... +.+.. .-..-.++++.|...+|+|+.+. ....|+.+++++.. . +.++ .....+ -..++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~---~~~~~~-~~s~~~ 327 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR---PREKGV-RYDVQM 327 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS---CCCTTC-CEEEEE
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee---cCCCCc-eEEEee
Confidence 99987542 23322 11223467899988889988754 35679999988652 2 3333 222222 12344
Q ss_pred ccCCeEEEEeC----CCCeEEEEeCCC-CcEEE-EEeCCccceeEEEeeeCCeEEEecCCC--CceEEEec
Q psy952 185 YFTERLYWADA----HLDYIASVDLDG-KHKHI-VISGQKVPHVFALTLFEDHIYWTDWNT--KSINRADK 247 (573)
Q Consensus 185 ~~~~~LYw~D~----~~~~I~~~~~dG-~~~~~-l~~~~~~~~p~~ia~~~~~lywtd~~~--~~I~~~~~ 247 (573)
..+++|||... ...+|+++++++ ...+. ++....-....++++++++||++-... ..|++++.
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 34788887643 345899999884 33333 443221124466777888888775443 35666664
No 294
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.97 E-value=0.36 Score=48.56 Aligned_cols=243 Identities=8% Similarity=-0.011 Sum_probs=137.4
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc-------
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE------- 78 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~------- 78 (573)
+|.+......+|+-+. ...|+..++...... .+......+..++|.+.++.|. +-...+.|..+++....
T Consensus 70 ~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la-s~~~d~~v~iw~~~~~~~~~~~~~ 148 (380)
T 3iz6_a 70 YSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA-CGGLDSACSIFNLSSQADRDGNMP 148 (380)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE-ECCSSSCCEEEECCCCSSCCCSST
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE-EeeCCCcEEEEECCCCccccCCcc
Confidence 3444332233444443 467888887654332 2222334567889998665554 44445667667664321
Q ss_pred ceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec------cCCCCcceEEEeCCCceEEEEecCCc
Q psy952 79 KERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK------TAIQDPRGITLHPGIGYVYFSSWNLQ 152 (573)
Q Consensus 79 ~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~------~~~~~P~~Iavdp~~g~LYwtd~~~~ 152 (573)
...++......+..+++.+..+..+++-+..+.|.+.++........+ ........+++.+..+.++.+-. ..
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs-~D 227 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS-CD 227 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE-TT
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE-CC
Confidence 111122222345566666555666667777888999888654433322 12334678888887777777753 35
Q ss_pred CeEEEEecc--CCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCc------cceeEE
Q psy952 153 AYIGKIGMD--GSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQK------VPHVFA 224 (573)
Q Consensus 153 ~~I~r~~ld--G~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~------~~~p~~ 224 (573)
..|...++. +.....+. ..-...+.|++.+.+ .++++-...+.|...++.......+..... .+...+
T Consensus 228 ~~v~~wd~~~~~~~~~~~~---~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 228 TTVRLWDLRITSRAVRTYH---GHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp SCEEEEETTTTCCCCEEEC---CCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred CeEEEEECCCCCcceEEEC---CcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 566666664 23333332 333446789998654 455566677888888887654433332210 112456
Q ss_pred Eeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 225 LTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 225 ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
+++. .+.++++-...+.|+.-+..+++....+
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 6663 4556666666778887776666554444
No 295
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.97 E-value=0.14 Score=51.98 Aligned_cols=213 Identities=12% Similarity=0.046 Sum_probs=117.1
Q ss_pred CCEEEEEecccEEEEEcCC--Cceeec--ccCCcceEEEEEEcC-CCEEEEEECCC--C-eEEEEEcCCCcceEEEcC-C
Q psy952 16 KPWLIFSNKYYVRNMSLDA--TQYSLV--HQDLLNVVAMDFHYK-ENRFYFADVAA--K-TIYRSRVGSTEKERVIRH-D 86 (573)
Q Consensus 16 ~~~l~~s~~~~I~~i~l~g--~~~~~~--~~~~~~~~~v~~d~~-~~~ly~~d~~~--~-~I~~~~~~g~~~~~i~~~-~ 86 (573)
...|+++....+.++..++ ...+.. ......+.+|++|+. .+.||+.-... + .|++..-.|...+.+... .
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPA 101 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCC
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCcccc
Confidence 4467777766787777643 444432 123345889999984 56677764322 1 687765445444433211 1
Q ss_pred C------------CCcceeEEeec--CCcEEEEeCCCCeEEEEEcCCCceeEeccC-------------------CCCcc
Q psy952 87 S------------HGLEGLAVDWV--GRKLYWLDRHSKQLDVAELDGTNRKTLKTA-------------------IQDPR 133 (573)
Q Consensus 87 ~------------~~p~glavD~~--~~~LY~td~~~~~I~~~~ldg~~~~~l~~~-------------------~~~P~ 133 (573)
+ ..+.+|++|+. .+.||+.-. .+.|++.+-.|..-+.+... .....
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 1 13456888864 577877542 45688776666554433210 01235
Q ss_pred eEEEeCC-CceEEEEecCCcCeEEEEeccCCCcEEEEecCCC--C--------CCCceEEEeccC-CeEEEEeCCCCeEE
Q psy952 134 GITLHPG-IGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD--I--------AWPNALTLDYFT-ERLYWADAHLDYIA 201 (573)
Q Consensus 134 ~Iavdp~-~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~--l--------~~P~glaiD~~~-~~LYw~D~~~~~I~ 201 (573)
.|++||. .+.||+... ...|++..-.|..-+.+...... + .....|++++.+ +.||+.. .+.|+
T Consensus 181 ~i~~d~~~~~~l~vg~~--~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~ 256 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMS--SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIY 256 (394)
T ss_dssp EEEECTTCTTCEEEEEE--TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEE
T ss_pred EEEECCCCCCEEEEEEC--CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEE
Confidence 8999984 467888752 24577776556554443200000 1 123578888753 6788764 34577
Q ss_pred EEeCCCCcEEEEEeCCccc-----eeEEEeee---CCeEEEe
Q psy952 202 SVDLDGKHKHIVISGQKVP-----HVFALTLF---EDHIYWT 235 (573)
Q Consensus 202 ~~~~dG~~~~~l~~~~~~~-----~p~~ia~~---~~~lywt 235 (573)
+.+-.|..-+.+... ++ ..+.|++. .+.||+.
T Consensus 257 ~s~D~G~tW~~~~~~--l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 257 RMDRREGVWKRIGDA--MPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEETTTTEEECGGGG--SCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred EeCCCCCcceECCCC--CCCCCccceEEEEECCCCCCEEEEE
Confidence 776555443333211 22 23556663 4667775
No 296
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.97 E-value=0.16 Score=55.81 Aligned_cols=243 Identities=8% Similarity=-0.001 Sum_probs=135.0
Q ss_pred CCceeeCCCCC-CEEEEEe-cccEEEEEcCCCce------eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC
Q psy952 6 ESTCKRRDSIK-PWLIFSN-KYYVRNMSLDATQY------SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST 77 (573)
Q Consensus 6 g~~C~~~~~~~-~~l~~s~-~~~I~~i~l~g~~~------~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~ 77 (573)
..+|.+..... .+|+-+. ...|+..++..... ..+......+..|+|.+..+.| ++-...+.|+..++...
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l-~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFA-LSGSWDGELRLWDLAAG 462 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTT
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEE-EEEeCCCcEEEEECCCC
Confidence 34565543222 3444433 46788888764221 1222234457899999765555 45556778999998765
Q ss_pred cceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc----CCCCcceEEEeCCCc-eEEEEecCCc
Q psy952 78 EKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT----AIQDPRGITLHPGIG-YVYFSSWNLQ 152 (573)
Q Consensus 78 ~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~----~~~~P~~Iavdp~~g-~LYwtd~~~~ 152 (573)
.....+......+..|++.+.++.|+ +-+..+.|.+.++.+.....+.. .......++++|... .++++- +..
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-s~d 540 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA-SWD 540 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE-ETT
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE-eCC
Confidence 43333333345788899987665554 44556789888887765555442 223367888988542 233443 235
Q ss_pred CeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeE
Q psy952 153 AYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHI 232 (573)
Q Consensus 153 ~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~l 232 (573)
..|...++........+ ...-.....|++.+.+. +.++-...+.|...++........... ......+++..+..
T Consensus 541 ~~v~vwd~~~~~~~~~~--~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~ 615 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTL--AGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKKLYSLEA--NSVIHALCFSPNRY 615 (694)
T ss_dssp SCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEEEECCBC--SSCEEEEEECSSSS
T ss_pred CeEEEEECCCCcEEEEE--cCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCceEEEecC--CCcEEEEEEcCCCc
Confidence 56777777655444434 23334457889987554 444545567777777764432211111 22355666643332
Q ss_pred EEecCCCCceEEEeccCCcceEEE
Q psy952 233 YWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 233 ywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
+++-...+.|...+..++..+..+
T Consensus 616 ~l~~~~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 616 WLCAATEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCEEEEECCCCCChhhh
Confidence 222223344665565555444433
No 297
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.97 E-value=0.36 Score=48.09 Aligned_cols=245 Identities=11% Similarity=0.038 Sum_probs=137.2
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCce-eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC------cc
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQY-SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST------EK 79 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~-~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~------~~ 79 (573)
+|.+......+|+-+. ...|+..++..... ..+......+.+++|.+.... +.+-...+.|..+++... ..
T Consensus 68 ~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~-lasg~~d~~i~v~~~~~~~~~~~~~~ 146 (354)
T 2pbi_B 68 LCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCA-IACGGLDNKCSVYPLTFDKNENMAAK 146 (354)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSE-EEEESTTSEEEEEECCCCTTCCSGGG
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCE-EEEeeCCCCEEEEEEecccccccccc
Confidence 3444332223444333 45677777654433 222223445778999986554 445556677777776432 11
Q ss_pred eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEeccCCCCcceEEEeCC-CceEEEEecCCcCeEEE
Q psy952 80 ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQDPRGITLHPG-IGYVYFSSWNLQAYIGK 157 (573)
Q Consensus 80 ~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l~~~~~~P~~Iavdp~-~g~LYwtd~~~~~~I~r 157 (573)
...+......+..+++.+.+..|+ +-+..+.|.+.++.... ..++.........+++.|. .+.++++-. ....|..
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~~l~-t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs-~Dg~v~~ 224 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG-CDKKAMV 224 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE-TTSCEEE
T ss_pred ceeeeccCCcEEEEEEeCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe-CCCeEEE
Confidence 112222234667788876555554 44567889998986443 3344444455678888775 345555542 3567777
Q ss_pred EeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCC-ccceeEEEeee-CCeEEEe
Q psy952 158 IGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQ-KVPHVFALTLF-EDHIYWT 235 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~-~~~~p~~ia~~-~~~lywt 235 (573)
.++........+ ...-...+++++.+.+..|+ +-...+.|...++.......+.... .......+++. .+.++.+
T Consensus 225 wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~-s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 225 WDMRSGQCVQAF--ETHESDVNSVRYYPSGDAFA-SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp EETTTCCEEEEE--CCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEEEEe--cCCCCCeEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 777644433333 23334457889987655544 4445678888888765443333321 12234566663 4555555
Q ss_pred cCCCCceEEEeccCCcceEEEcc
Q psy952 236 DWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 236 d~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
-...+.|...+..++....++..
T Consensus 302 g~~d~~i~vwd~~~~~~~~~l~~ 324 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSRVSILFG 324 (354)
T ss_dssp EETTSCEEEEETTTCSEEEEECC
T ss_pred EECCCcEEEEECCCCceEEEEEC
Confidence 55667787777667766555543
No 298
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.94 E-value=0.44 Score=48.82 Aligned_cols=223 Identities=14% Similarity=0.093 Sum_probs=125.6
Q ss_pred EEEEEe-cccEEEEEcCCCceee-cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEE
Q psy952 18 WLIFSN-KYYVRNMSLDATQYSL-VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAV 95 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~~-~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glav 95 (573)
+|+.+. ...|+..++....... +......+..++++ .+. +++-...+.|..+++........+......+..+++
T Consensus 171 ~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKR-VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTE-EEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCE-EEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 344333 4678888887554332 22234457788886 344 444456678999998765443334333356666666
Q ss_pred eecCCcEEEEeCCCCeEEEEEcCCCce-eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCC
Q psy952 96 DWVGRKLYWLDRHSKQLDVAELDGTNR-KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD 174 (573)
Q Consensus 96 D~~~~~LY~td~~~~~I~~~~ldg~~~-~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~ 174 (573)
+ ++ ++++-...+.|.+.++..... ..+.........|+++ ..+|+... ....|...++........+ ...
T Consensus 248 ~--~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~d~~i~i~d~~~~~~~~~~--~~~ 318 (445)
T 2ovr_B 248 D--GR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGS--LDTSIRVWDVETGNCIHTL--TGH 318 (445)
T ss_dssp C--SS-CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC--SSEEEEEE--TTSCEEEEETTTCCEEEEE--CCC
T ss_pred C--CC-EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC--CCEEEEEe--CCCeEEEEECCCCCEEEEE--cCC
Confidence 3 44 444444577899998865433 3333333445667763 34555544 3566777777544433333 222
Q ss_pred CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCC--ccceeEEEeeeCCeEEEecCCCCceEEEeccCCcc
Q psy952 175 IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQ--KVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRD 252 (573)
Q Consensus 175 l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~--~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~ 252 (573)
......++++ ++.|+ +-...+.|...++........+... .......+++.++ ++++-...+.|...+..+++.
T Consensus 319 ~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 319 QSLTSGMELK--DNILV-SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-FVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp CSCEEEEEEE--TTEEE-EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCE
T ss_pred cccEEEEEEe--CCEEE-EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCC-EEEEEeCCCeEEEEECCCCce
Confidence 2334455554 45444 4446678888888544433333321 1234566777554 444545667888888777776
Q ss_pred eEEE
Q psy952 253 YRVL 256 (573)
Q Consensus 253 ~~~l 256 (573)
...+
T Consensus 395 ~~~~ 398 (445)
T 2ovr_B 395 IRNL 398 (445)
T ss_dssp EEEE
T ss_pred eeee
Confidence 6655
No 299
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.94 E-value=0.00053 Score=59.68 Aligned_cols=117 Identities=20% Similarity=0.321 Sum_probs=73.8
Q ss_pred CcccccccccccCccceee-eccceeecC-----CCCC---CCcccCCc-cccC-CCeeeec--ceeeCCcCCCCCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGS-----GNKE---NSTCSSSQ-FRCN-NGKCIDY--HLVCNKESDCEDDSDE 340 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~-----d~~~---~~~C~~~~-~~C~-~g~Ci~~--~~~cd~~~~c~d~sde 340 (573)
++|.+.|.....=...++| |+.||.... +++. +++|.... ..|. ++.|+.. +|.|...++......+
T Consensus 3 ~~C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 3 RGCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp CCCCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CCCcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 4666666543210124899 999998742 2222 67787643 3675 4678865 6888655555433222
Q ss_pred C-------CCC-CCccccCCCCCccCC--ccccCCCCccccCCCCceecCCCccccccccc
Q psy952 341 P-------LHC-NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391 (573)
Q Consensus 341 ~-------~~c-~~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C 391 (573)
. ..| ++++|.. ....|.+ .|.+..++|.|.|+.+|......+.++..++|
T Consensus 83 ~~~~~~~~~~C~dideC~~-~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C 142 (143)
T 2bou_A 83 KTFKNESENTCQDVDECSS-GQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142 (143)
T ss_dssp SCBSSGGGCCEEECCHHHH-TCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred cccccCCCCCcCCccCccC-cCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCcc
Confidence 1 134 4778875 4577875 89999999999999999887766555555444
No 300
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.88 E-value=0.38 Score=47.50 Aligned_cols=198 Identities=11% Similarity=0.047 Sum_probs=111.7
Q ss_pred cceEEEEE-----EcCCCEEEEEECCCCeEEEEEcCCCc-------ceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeE
Q psy952 45 LNVVAMDF-----HYKENRFYFADVAAKTIYRSRVGSTE-------KERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQL 112 (573)
Q Consensus 45 ~~~~~v~~-----d~~~~~ly~~d~~~~~I~~~~~~g~~-------~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I 112 (573)
..+..|+| .+.++.++++-...+.|...++.... ....+......+..|++.+.+ .+.++-...+.|
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v 100 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTL 100 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTSEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEEEEEcCCCcE
Confidence 34677877 44356677777777778887775421 112233333567888888654 444565667889
Q ss_pred EEEEcCC-CceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccC----
Q psy952 113 DVAELDG-TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFT---- 187 (573)
Q Consensus 113 ~~~~ldg-~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~---- 187 (573)
.+.++.. .....+.........|+++|...+|+-.. ....|...++.+.....+............+++.+..
T Consensus 101 ~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG--AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE--TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCS
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc--CCCEEEEEeccCCceeeeecccCCCceeeeeeecccccccc
Confidence 9999864 44444545555688999999766665544 3456666666643322211000111223456665443
Q ss_pred -----CeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEec
Q psy952 188 -----ERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADK 247 (573)
Q Consensus 188 -----~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~ 247 (573)
+.++.+-...+.|...+..+.....+... ......|++. ++.++.+-...+.|..-+.
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h--~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAH--ESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEETTTEEEEEEECC--SSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred ccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCc--cccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 13444445567777777555433333222 2345677774 3455555555666666654
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.87 E-value=0.17 Score=56.60 Aligned_cols=215 Identities=7% Similarity=-0.057 Sum_probs=124.7
Q ss_pred cccEEEEEcCCCceeecc--------c--CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc---CCCCCc
Q psy952 24 KYYVRNMSLDATQYSLVH--------Q--DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR---HDSHGL 90 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~--------~--~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~---~~~~~p 90 (573)
...|.+++.....+.... . ....+.+|..|. .+.||+.... +.|++++..+.....+.. .....+
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~~v 409 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDG-GGINVFENGKRVAIYNKENRELLSNSV 409 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBS-SCEEEEETTEEEEECC-----CCCSBE
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCC-CcEEEEECCCCeEEEccCCCCCCCcce
Confidence 566777776654433221 1 123477888884 5778877543 348888875432221111 112456
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc---CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT---AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTR 167 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~---~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~ 167 (573)
.+|+.|. .++||+... .+.|.+++......+.+.. .....++|+.|+ .|.||+... ..|.+.+......+.
T Consensus 410 ~~i~~d~-~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~---~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 410 LCSLKDS-EGNLWFGTY-LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH---AGVFVIDLASKKVIH 483 (781)
T ss_dssp EEEEECT-TSCEEEEET-TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET---TEEEEEESSSSSCCE
T ss_pred EEEEECC-CCCEEEEec-cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC---CceEEEeCCCCeEEe
Confidence 7788874 567777643 3468888776544333322 223578899987 678887763 468888877655444
Q ss_pred EEecCC--C--CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCcc--ceeEEEeee-CCeEEEecCCCC
Q psy952 168 ILTHED--D--IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKV--PHVFALTLF-EDHIYWTDWNTK 240 (573)
Q Consensus 168 l~~~~~--~--l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~--~~p~~ia~~-~~~lywtd~~~~ 240 (573)
+.. .. . ...+..|+.| ..++||++-.+. .|.+++.++...+.+.....+ ....+|..+ ++.||++.. .
T Consensus 484 ~~~-~~~~~~~~~~i~~i~~d-~~g~lWigt~~~-Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~ 558 (781)
T 3v9f_A 484 HYD-TSNSQLLENFVRSIAQD-SEGRFWIGTFGG-GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--E 558 (781)
T ss_dssp EEC-TTTSSCSCSCEEEEEEC-TTCCEEEEESSS-CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--T
T ss_pred ccc-CcccccccceeEEEEEc-CCCCEEEEEcCC-CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--C
Confidence 431 11 0 2345688888 577888876543 478888876655444322112 245677775 456666644 3
Q ss_pred ce-EEEeccCCc
Q psy952 241 SI-NRADKFNGR 251 (573)
Q Consensus 241 ~I-~~~~~~~g~ 251 (573)
.| .+.++.+++
T Consensus 559 Glv~~~d~~~~~ 570 (781)
T 3v9f_A 559 GLVCFPSARNFD 570 (781)
T ss_dssp EEEEESCTTTCC
T ss_pred CceEEECCCCCc
Confidence 45 776655543
No 302
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.86 E-value=0.18 Score=51.59 Aligned_cols=248 Identities=12% Similarity=0.067 Sum_probs=130.1
Q ss_pred CceeeCCC-CCCEEEEEe-cccEEEEEcCC---Cc-e--eecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcC---
Q psy952 7 STCKRRDS-IKPWLIFSN-KYYVRNMSLDA---TQ-Y--SLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVG--- 75 (573)
Q Consensus 7 ~~C~~~~~-~~~~l~~s~-~~~I~~i~l~g---~~-~--~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~--- 75 (573)
.+|.+... ...+|+.+. ...|+..++.. .. . .........+.+|+|.+..+.|+.+ ...+.|..++++
T Consensus 66 V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~dg~i~vwd~~~~~ 144 (437)
T 3gre_A 66 ITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVS-SKDGQIIVLKVNHYQ 144 (437)
T ss_dssp EEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEE-ETTSEEEEEEEEEEE
T ss_pred eEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEE-eCCCEEEEEEecccc
Confidence 34554432 234555544 45777777754 21 1 1222334568899999755555544 456677777663
Q ss_pred -CCcceEEEcC-----------CCCCcceeEEee-cCCcEEEEeCCCCeEEEEEcCCCce-eEecc--CCCCcceEEEeC
Q psy952 76 -STEKERVIRH-----------DSHGLEGLAVDW-VGRKLYWLDRHSKQLDVAELDGTNR-KTLKT--AIQDPRGITLHP 139 (573)
Q Consensus 76 -g~~~~~i~~~-----------~~~~p~glavD~-~~~~LY~td~~~~~I~~~~ldg~~~-~~l~~--~~~~P~~Iavdp 139 (573)
+.....+... .-..+..+++-+ ..+.++++-...+.|.+.++..... ..+.. .......|+++|
T Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~ 224 (437)
T 3gre_A 145 QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE 224 (437)
T ss_dssp ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT
T ss_pred CCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC
Confidence 2211111100 011222222111 1245555555678999999865443 33333 345689999999
Q ss_pred CCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEecc---CCeEEEEeCCCCeEEEEeCCCCcEEEEEeC
Q psy952 140 GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYF---TERLYWADAHLDYIASVDLDGKHKHIVISG 216 (573)
Q Consensus 140 ~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~---~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~ 216 (573)
...+|+... ..+.|...++........+. ...-.....|++.+. ++++.++-...+.|...++........+.+
T Consensus 225 ~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 301 (437)
T 3gre_A 225 ECCVLILGT--TRGIIDIWDIRFNVLIRSWS-FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFIN 301 (437)
T ss_dssp TSCEEEEEE--TTSCEEEEETTTTEEEEEEB-CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEES
T ss_pred CCCEEEEEc--CCCeEEEEEcCCccEEEEEe-cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEc
Confidence 755565554 24567666665432222110 111112245555432 355556666667788888874443322221
Q ss_pred Cc-------------------------cceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 217 QK-------------------------VPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 217 ~~-------------------------~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
.. ......|++.++.++++-...+.|..-+..+++...++..
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 302 SDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp SSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred CCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEec
Confidence 10 0113446666666777766677888777777776665543
No 303
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.85 E-value=0.37 Score=49.39 Aligned_cols=195 Identities=14% Similarity=0.100 Sum_probs=111.8
Q ss_pred eEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-eeEe
Q psy952 47 VVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTL 125 (573)
Q Consensus 47 ~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~~l 125 (573)
+..+++| ++ ++++-...+.|..+++........+......+..|++ .+.+.++-...+.|.+.++.... ...+
T Consensus 136 v~~~~~d--~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 136 VYCLQYD--DQ-KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp EEEEECC--SS-EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred EEEEEEC--CC-EEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 5566653 44 4455556678999998765544444433345666666 34566666667899999987443 3344
Q ss_pred ccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE---EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEE
Q psy952 126 KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT---RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIAS 202 (573)
Q Consensus 126 ~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~---~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~ 202 (573)
.........|++++ +.|+... ..+.|...++...... ... ...-.....++++ +..|+.+. ..+.|..
T Consensus 210 ~~h~~~v~~l~~~~--~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~l~s~~-~dg~i~v 280 (435)
T 1p22_A 210 IHHCEAVLHLRFNN--GMMVTCS--KDRSIAVWDMASPTDITLRRVL--VGHRAAVNVVDFD--DKYIVSAS-GDRTIKV 280 (435)
T ss_dssp CCCCSCEEEEECCT--TEEEEEE--TTSCEEEEECSSSSCCEEEEEE--CCCSSCEEEEEEE--TTEEEEEE-TTSEEEE
T ss_pred cCCCCcEEEEEEcC--CEEEEee--CCCcEEEEeCCCCCCceeeeEe--cCCCCcEEEEEeC--CCEEEEEe-CCCeEEE
Confidence 34444566777764 4454443 3456766666544322 222 2222233456653 55555554 5678888
Q ss_pred EeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 203 VDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 203 ~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
.++........+.+. ......+++.++. +++-...+.|...+..+++....+..
T Consensus 281 wd~~~~~~~~~~~~~-~~~v~~~~~~~~~-l~~g~~dg~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 281 WNTSTCEFVRTLNGH-KRGIACLQYRDRL-VVSGSSDNTIRLWDIECGACLRVLEG 334 (435)
T ss_dssp EETTTCCEEEEEECC-SSCEEEEEEETTE-EEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EECCcCcEEEEEcCC-CCcEEEEEeCCCE-EEEEeCCCeEEEEECCCCCEEEEEeC
Confidence 888755443333332 3345666665554 44444567788888777776666544
No 304
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.84 E-value=0.43 Score=47.06 Aligned_cols=225 Identities=8% Similarity=-0.044 Sum_probs=121.2
Q ss_pred CEEEEEe-cccEEEEEcCCCc--------eeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC
Q psy952 17 PWLIFSN-KYYVRNMSLDATQ--------YSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS 87 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~--------~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~ 87 (573)
.+|+-+. ...|+..++.... ...+......+..|+|.+....| ++-...+.|...++........+....
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA-ISSSWDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE-EEEETTSEEEEEETTSSCEEEEEECCC
T ss_pred CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 3454443 4678877775321 11122233457899998755544 455567789999987544332333333
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec---cCCCCcceEEEeCCCc---------eEEEEecCCcCeE
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK---TAIQDPRGITLHPGIG---------YVYFSSWNLQAYI 155 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~---~~~~~P~~Iavdp~~g---------~LYwtd~~~~~~I 155 (573)
..+..|++.+.++.|+-+ ...+.|.+.++.+.....+. ........+++.|... .++.+- +....|
T Consensus 119 ~~v~~v~~sp~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i 196 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSA-GAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASV-GWDGRL 196 (343)
T ss_dssp SCEEEEEECSSTTEEEEE-ETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE-ETTSEE
T ss_pred CcEEEEEECCCCCEEEEE-cCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEE-cCCCEE
Confidence 578889998766655544 45678999898765544333 1233466777777531 233332 234566
Q ss_pred EEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcE-EEEEeCCccceeEEEeeeCCeEE
Q psy952 156 GKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHK-HIVISGQKVPHVFALTLFEDHIY 233 (573)
Q Consensus 156 ~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~-~~l~~~~~~~~p~~ia~~~~~ly 233 (573)
...+..+.....+. ..-.....|++.+.+..|. +-...+.|...++. .... ..+..+ .....|++..+.-+
T Consensus 197 ~iwd~~~~~~~~~~---~h~~~v~~~~~s~~g~~l~-sgs~dg~v~iwd~~~~~~~~~~~~~~---~~v~~v~~sp~~~~ 269 (343)
T 2xzm_R 197 KVWNTNFQIRYTFK---AHESNVNHLSISPNGKYIA-TGGKDKKLLIWDILNLTYPQREFDAG---STINQIAFNPKLQW 269 (343)
T ss_dssp EEEETTTEEEEEEE---CCSSCEEEEEECTTSSEEE-EEETTCEEEEEESSCCSSCSEEEECS---SCEEEEEECSSSCE
T ss_pred EEEcCCCceeEEEc---CccccceEEEECCCCCEEE-EEcCCCeEEEEECCCCcccceeecCC---CcEEEEEECCCCCE
Confidence 66665443333333 2233457888987655554 44456778887873 3222 222222 23556666433222
Q ss_pred EecCCCCceEEEeccCCc
Q psy952 234 WTDWNTKSINRADKFNGR 251 (573)
Q Consensus 234 wtd~~~~~I~~~~~~~g~ 251 (573)
++-...+.|...+..++.
T Consensus 270 la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 270 VAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp EEEEESSCEEEEESSSCC
T ss_pred EEEECCCCEEEEEeCCCC
Confidence 222223445555544443
No 305
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.83 E-value=0.024 Score=62.72 Aligned_cols=186 Identities=9% Similarity=-0.063 Sum_probs=105.5
Q ss_pred EEEEEecccEEEEEcCCCceeecc-cCC------------------cceEEEEEEcCCCEEEEEECCC------------
Q psy952 18 WLIFSNKYYVRNMSLDATQYSLVH-QDL------------------LNVVAMDFHYKENRFYFADVAA------------ 66 (573)
Q Consensus 18 ~l~~s~~~~I~~i~l~g~~~~~~~-~~~------------------~~~~~v~~d~~~~~ly~~d~~~------------ 66 (573)
+|+++..+.|+.+++.+.....+. .+. ....+++|.+.++.|+++....
T Consensus 123 ~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~ 202 (719)
T 1z68_A 123 KLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYG 202 (719)
T ss_dssp CEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECC
T ss_pred EEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccC
Confidence 566777788999998765443332 111 1124789999888888764321
Q ss_pred ---------------------CeEEEEEcCCCcce---EEEc-----CCCCCcceeEEeecCCcEEEE--eCCC--CeEE
Q psy952 67 ---------------------KTIYRSRVGSTEKE---RVIR-----HDSHGLEGLAVDWVGRKLYWL--DRHS--KQLD 113 (573)
Q Consensus 67 ---------------------~~I~~~~~~g~~~~---~i~~-----~~~~~p~glavD~~~~~LY~t--d~~~--~~I~ 113 (573)
..|+.+++++.... .+.. .....+..+++.+. ++|+++ +... ..|.
T Consensus 203 ~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~ 281 (719)
T 1z68_A 203 DEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLS 281 (719)
T ss_dssp SSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEE
T ss_pred CCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEE
Confidence 15667777664421 1110 11123456666665 455554 3222 3588
Q ss_pred EEE----cCCCceeEecc----C-CCCc-----ceEEEeCCCceEEEE-e-cCCcCeEEEEeccCCCcEEEEecCCCCCC
Q psy952 114 VAE----LDGTNRKTLKT----A-IQDP-----RGITLHPGIGYVYFS-S-WNLQAYIGKIGMDGSNFTRILTHEDDIAW 177 (573)
Q Consensus 114 ~~~----ldg~~~~~l~~----~-~~~P-----~~Iavdp~~g~LYwt-d-~~~~~~I~r~~ldG~~~~~l~~~~~~l~~ 177 (573)
+.+ +.+...+.+.. . -... ..+++.|....||+. . .....+|+..++++...+.+. ..-..
T Consensus 282 ~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt---~~~~~ 358 (719)
T 1z68_A 282 ICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQIT---SGKWE 358 (719)
T ss_dssp EEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECS---CSSSC
T ss_pred EEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecc---cCceE
Confidence 888 65544333331 1 1112 267899977777763 2 222457999998887654443 21111
Q ss_pred CceEEEeccCCeEEEEeCC------CCeEEEEeCCCC
Q psy952 178 PNALTLDYFTERLYWADAH------LDYIASVDLDGK 208 (573)
Q Consensus 178 P~glaiD~~~~~LYw~D~~------~~~I~~~~~dG~ 208 (573)
..++... .+++||++... ..+|+++++++.
T Consensus 359 v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 359 AINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 2344444 68889888754 347888888654
No 306
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.82 E-value=0.054 Score=50.12 Aligned_cols=132 Identities=14% Similarity=0.128 Sum_probs=84.3
Q ss_pred CEEEEEecccEEEEEcCCCc---e----eeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC-------CcceE
Q psy952 17 PWLIFSNKYYVRNMSLDATQ---Y----SLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS-------TEKER 81 (573)
Q Consensus 17 ~~l~~s~~~~I~~i~l~g~~---~----~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g-------~~~~~ 81 (573)
.+|+......|+.-.+.... + +.+-. +..+...|+|++ ++.||.+ ..+.|++++... .....
T Consensus 5 ~~l~~v~~d~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQDKFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETTEEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCCcEEecCCCCCcccchhhhccccCccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 34444445577766654332 2 12222 356778999999 9999999 677899999744 12223
Q ss_pred EEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEc--CCCc-----eeEec-cCCCCcceEEEeCCCceEEEEecCCcC
Q psy952 82 VIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAEL--DGTN-----RKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQA 153 (573)
Q Consensus 82 i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~l--dg~~-----~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~ 153 (573)
|-..+...-..|.+| .++.||.. ..+.|++.+. ++.. ..+|. .+...-..|+++| .|.||-.. . .
T Consensus 82 IG~~Gw~~F~a~~fD-~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d--g 154 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFD-PNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G--Q 154 (236)
T ss_dssp EECSCGGGCSEEEEC-TTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T--T
T ss_pred ecccccccceEEEEC-CCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C--C
Confidence 333344556789999 58899999 3489999876 3322 12222 2445568999999 78999877 2 3
Q ss_pred eEEEE
Q psy952 154 YIGKI 158 (573)
Q Consensus 154 ~I~r~ 158 (573)
.|+|.
T Consensus 155 ~lyr~ 159 (236)
T 1tl2_A 155 QFYKA 159 (236)
T ss_dssp EEEEE
T ss_pred cEEec
Confidence 46553
No 307
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.80 E-value=0.1 Score=58.20 Aligned_cols=173 Identities=7% Similarity=0.092 Sum_probs=97.6
Q ss_pred cEEEEEcCCC-ceeecccCCcc-eEEEEEEcCCCEEEEEECCC----CeEEEEEcCCCcce--EEEcC-CCCCcceeEEe
Q psy952 26 YVRNMSLDAT-QYSLVHQDLLN-VVAMDFHYKENRFYFADVAA----KTIYRSRVGSTEKE--RVIRH-DSHGLEGLAVD 96 (573)
Q Consensus 26 ~I~~i~l~g~-~~~~~~~~~~~-~~~v~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~~--~i~~~-~~~~p~glavD 96 (573)
.|+++++++. .. +...+.. ..+++|.+.++.||++.... ..|++.++.+...+ .+... .-....++++.
T Consensus 202 ~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 202 TIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp EEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred EEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 4999999876 42 1111111 24678988888898886532 37999999765422 33321 11223455666
Q ss_pred ecCCcEEEEeC--CCCeEEEEEcCCC--ce--eEeccCCCCc-ceEEEeCCCceEEEE-ecC--CcCeEEEEeccC-CCc
Q psy952 97 WVGRKLYWLDR--HSKQLDVAELDGT--NR--KTLKTAIQDP-RGITLHPGIGYVYFS-SWN--LQAYIGKIGMDG-SNF 165 (573)
Q Consensus 97 ~~~~~LY~td~--~~~~I~~~~ldg~--~~--~~l~~~~~~P-~~Iavdp~~g~LYwt-d~~--~~~~I~r~~ldG-~~~ 165 (573)
+.++.|+|+.. ....|+++++++. .. +.|......+ ..+... ..+.|||. +.. ...+|+++++++ ...
T Consensus 280 pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~ 358 (751)
T 2xe4_A 280 ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH-GTSHLVILTNEGGAVNHKLLIAPRGQPSDW 358 (751)
T ss_dssp TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-TTTEEEEEECTTTCTTCEEEEEETTSTTCC
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-eCCEEEEEeCCCCCCCcEEEEEcCCCcccc
Confidence 67778888653 3457888998864 22 3444333233 222222 25666665 432 356899999884 232
Q ss_pred EE-EEecCCCCC-CCceEEEeccCCeEEEEeCCC--CeEEEEeC
Q psy952 166 TR-ILTHEDDIA-WPNALTLDYFTERLYWADAHL--DYIASVDL 205 (573)
Q Consensus 166 ~~-l~~~~~~l~-~P~glaiD~~~~~LYw~D~~~--~~I~~~~~ 205 (573)
+. ++ ...-. ...++++ .++.||++-... .+|+.+++
T Consensus 359 ~~~li--~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 359 SHVLV--DHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CCEEE--CCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred eeeEE--CCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 33 44 22211 1234444 477888875543 46888885
No 308
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.78 E-value=0.44 Score=46.33 Aligned_cols=207 Identities=12% Similarity=0.034 Sum_probs=118.6
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-----eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-----ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG 119 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-----~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg 119 (573)
..+.+|+|.+..+.++++-...+.|...++..... ...+......+..|++.+.++.|+.+ ...+.|.+.+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~ 117 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTT 117 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE-cccccceEEeecc
Confidence 45889999988777777777778888888765321 11222223577888998765555544 4567888888776
Q ss_pred CceeEec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCC-eEEEEeCCC
Q psy952 120 TNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTE-RLYWADAHL 197 (573)
Q Consensus 120 ~~~~~l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~-~LYw~D~~~ 197 (573)
....... ........+...+...+|+... ....|...++.+.....+.. .........+++.+... .++++-...
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s--~d~~~~~~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 118 GTTTRRFVGHTKDVLSVAFSSDNRQIVSGS--RDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECS-SSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred cceeeeecCCCCceeEEEEeecCccceeec--CCCeEEEEEeCCCceEEEEe-ccccCcccceEEccCCCCcEEEEEcCC
Confidence 5544433 3344456666777655555443 23455555555444333320 11122334566654443 344555556
Q ss_pred CeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 198 DYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 198 ~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
+.|...++..........+. .....+|++. ++.++++-...+.|...+..++.....+
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 67887887765544444332 2345677774 3455555555667776665555444333
No 309
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.75 E-value=0.00049 Score=51.38 Aligned_cols=46 Identities=35% Similarity=0.710 Sum_probs=38.4
Q ss_pred CCccccCCCCCccCCccccCCC-CccccCCCCceecCCCccccccccc
Q psy952 345 NVDECAKVETNQCGHKCVDTLT-GYYCECNTGYKLLEDGKACTDIDEC 391 (573)
Q Consensus 345 ~~~~C~~~~~~~C~~~C~~~~~-~~~C~C~~~f~c~~~~~c~~~~~~C 391 (573)
++++|.. .+..|.+.|.+..+ ++.|+|+.+|++..+++.|.++++|
T Consensus 4 d~~eC~~-~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec 50 (69)
T 1kli_L 4 DQLICVN-ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 50 (69)
T ss_dssp CCCCTTS-GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred ccccccC-CCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCcccc
Confidence 3567876 67889999999998 7999999999999887777776665
No 310
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.75 E-value=0.00045 Score=49.14 Aligned_cols=45 Identities=27% Similarity=0.701 Sum_probs=36.8
Q ss_pred ccccCCCCCccCCccccCCCCccccCCCCceecCCCcccccccccC
Q psy952 347 DECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDECI 392 (573)
Q Consensus 347 ~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~ 392 (573)
+||.. .+..|.+.|.|+.++|.|.|+.+|++..+++.|.++++|.
T Consensus 2 dEC~~-~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTT-GGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccC-CCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 35654 5677988999999999999999999988777777777664
No 311
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.1 Score=58.27 Aligned_cols=201 Identities=7% Similarity=-0.027 Sum_probs=114.1
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCcee---ecccCCcceEEEEEEcCC-CEEEEEECCCCeEEEEEcCCCcce-
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYS---LVHQDLLNVVAMDFHYKE-NRFYFADVAAKTIYRSRVGSTEKE- 80 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~---~~~~~~~~~~~v~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~- 80 (573)
.+|.+......+|+.+. .+.|+..++.+.... .+......+.+|+|.+.. +.++++-...+.|+..++.+....
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc
Confidence 34555432334555554 567888887643222 222234557899997652 445555556778888888765422
Q ss_pred -EEEcCCCCCcceeEEeecC-CcEEEEeCCCCeEEEEEcCCCce---eEeccCCCCcceEEEeCC------------Cce
Q psy952 81 -RVIRHDSHGLEGLAVDWVG-RKLYWLDRHSKQLDVAELDGTNR---KTLKTAIQDPRGITLHPG------------IGY 143 (573)
Q Consensus 81 -~i~~~~~~~p~glavD~~~-~~LY~td~~~~~I~~~~ldg~~~---~~l~~~~~~P~~Iavdp~------------~g~ 143 (573)
..+......+..+++.+.. +.++++-...+.|.+.++..... ..+.........|+++|. .+.
T Consensus 92 ~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~ 171 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR 171 (753)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGC
T ss_pred cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCC
Confidence 2233234578888888762 44555555678999999876522 222234455788899884 244
Q ss_pred EEEEecCCcCeEEEEeccCCCc--EEEEecCCCCCCCceEEEeccC--CeEEEEeCCCCeEEEEeCCCC
Q psy952 144 VYFSSWNLQAYIGKIGMDGSNF--TRILTHEDDIAWPNALTLDYFT--ERLYWADAHLDYIASVDLDGK 208 (573)
Q Consensus 144 LYwtd~~~~~~I~r~~ldG~~~--~~l~~~~~~l~~P~glaiD~~~--~~LYw~D~~~~~I~~~~~dG~ 208 (573)
++++-. ..+.|...++..... ..+......-.....|++.+.. +.++++-...+.|...++...
T Consensus 172 ~l~sgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 172 KFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEEEE-CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 444432 245566666554322 1111102223345688998763 555566556677777776653
No 312
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.67 E-value=0.015 Score=58.36 Aligned_cols=154 Identities=8% Similarity=-0.071 Sum_probs=85.5
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc--ceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc--
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE--KERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-- 121 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-- 121 (573)
.+..|+|.+.++.|+ +-...+.|+.+++.+.. ....+......+..|++.+.++.|+.+. ..+.|.+.++....
T Consensus 13 ~v~~~~~s~~g~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFV-TTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPDGTW 90 (377)
T ss_dssp CCSCCEECSSSSEEE-CCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-TTSSEEEC------CC
T ss_pred cEEEEEECCCCCEEE-EecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCce
Confidence 466788887555444 33345667777766542 1112222235678888887665555544 56788888887544
Q ss_pred --eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC----cEEEEecCCCCCCCceEEEeccCCeEEEEeC
Q psy952 122 --RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN----FTRILTHEDDIAWPNALTLDYFTERLYWADA 195 (573)
Q Consensus 122 --~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~----~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~ 195 (573)
...+.........|+++|...+|+.... ...|...+++... ...+. ...-.....|++.+.+..|+.+.
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~~~~- 165 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSG--ARVISVCYFEQENDWWVSKHLK--RPLRSTILSLDWHPNNVLLAAGC- 165 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEES--SSCEEECCC-----CCCCEEEC--SSCCSCEEEEEECTTSSEEEEEE-
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEec--CCeEEEEEECCcccceeeeEee--cccCCCeEEEEEcCCCCEEEEEe-
Confidence 2233344556889999997666666552 4566666666543 23332 11334457899987665555544
Q ss_pred CCCeEEEEeCC
Q psy952 196 HLDYIASVDLD 206 (573)
Q Consensus 196 ~~~~I~~~~~d 206 (573)
..+.|...++.
T Consensus 166 ~d~~i~iwd~~ 176 (377)
T 3dwl_C 166 ADRKAYVLSAY 176 (377)
T ss_dssp SSSCEEEEEEC
T ss_pred CCCEEEEEEEE
Confidence 45666666653
No 313
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.66 E-value=0.35 Score=53.04 Aligned_cols=206 Identities=12% Similarity=0.065 Sum_probs=128.4
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc-----eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK-----ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD 118 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-----~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld 118 (573)
...+.+|++.+.+..++++-...+.|...++..... ...+......+..|++.+.++.| ++-+..+.|.+.++.
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l-~sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFA-LSGSWDGELRLWDLA 460 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETT
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEE-EEEeCCCcEEEEECC
Confidence 344788999887778888888888898888864321 11233333567889998755444 555567899999986
Q ss_pred CCc-eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEec-CCCCCCCceEEEeccCC-eEEEEeC
Q psy952 119 GTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH-EDDIAWPNALTLDYFTE-RLYWADA 195 (573)
Q Consensus 119 g~~-~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~-~~~l~~P~glaiD~~~~-~LYw~D~ 195 (573)
... .+.+.........|+++|...+|+-.. ....|..-++.+.....+... .........+++.+... .++++-.
T Consensus 461 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 461 AGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS--RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred CCcceeEEeCCCCCEEEEEEeCCCCEEEEEe--CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 543 344445556688999999766665544 345666666655443333310 01112245677776542 3555555
Q ss_pred CCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEeccCCcce
Q psy952 196 HLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDY 253 (573)
Q Consensus 196 ~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~ 253 (573)
..+.|...++........+.+. ......|++. ++.++.+-...+.|..-+..+++..
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp TTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 6778888888766554444432 3456778874 4566666666777877776666543
No 314
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.64 E-value=0.28 Score=50.03 Aligned_cols=158 Identities=10% Similarity=0.107 Sum_probs=93.5
Q ss_pred ceeeCCCCCCEEEEEecccEEEEEcC-CCc-eee-------cccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc
Q psy952 8 TCKRRDSIKPWLIFSNKYYVRNMSLD-ATQ-YSL-------VHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE 78 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~~~~I~~i~l~-g~~-~~~-------~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 78 (573)
++.+......+|+.+....|+..++. +.. ... +......+..|+|++.+..++++-...+.|..+++....
T Consensus 181 ~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 181 NSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 34443333346666666788888887 222 221 112334588999998774555665667789999987654
Q ss_pred c----eEEEcCCCC------------CcceeEEeecCCcEEEEeCCCCeEEEEEcCC--CceeEeccC--CC--------
Q psy952 79 K----ERVIRHDSH------------GLEGLAVDWVGRKLYWLDRHSKQLDVAELDG--TNRKTLKTA--IQ-------- 130 (573)
Q Consensus 79 ~----~~i~~~~~~------------~p~glavD~~~~~LY~td~~~~~I~~~~ldg--~~~~~l~~~--~~-------- 130 (573)
. ...+..... .+..|++.+.++.|..... +.|.+.++.. .....+... +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeecccccccccccccc
Confidence 3 233333222 6788999886666655544 8999999863 333333211 11
Q ss_pred -----CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEE
Q psy952 131 -----DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 131 -----~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~ 169 (573)
....++++|...+|+... ..+.|...++.......+.
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s--~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGS--YNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEEC--STTEEEEEETTTCCEEEEE
T ss_pred ccccccceEEEECCCCCEEEEec--cCCEEEEEEcCCCcceeee
Confidence 122499999766664433 4667888888766554443
No 315
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=96.55 E-value=0.0054 Score=66.04 Aligned_cols=110 Identities=17% Similarity=0.327 Sum_probs=72.0
Q ss_pred cccccccCccceee--eccceeecCCCCC-CCcccCCccccCCC----eeeec--ceeeC-CcCCCCCCC----------
Q psy952 279 AWLTAHRGSTTVAD--MIRSVYLGSGNKE-NSTCSSSQFRCNNG----KCIDY--HLVCN-KESDCEDDS---------- 338 (573)
Q Consensus 279 lCl~~~~~~~~~~C--Cp~~~~l~~d~~~-~~~C~~~~~~C~~g----~Ci~~--~~~cd-~~~~c~d~s---------- 338 (573)
.|+... ..+|+| |+.||........ +.+|...+..|.++ .|+.. +|+|. +.++..-..
T Consensus 16 ~C~n~~--~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~ 93 (634)
T 1yo8_A 16 QCSSFP--DGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAK 93 (634)
T ss_dssp CEEECT--TSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHH
T ss_pred EEecCC--CCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccc
Confidence 566655 124999 9999974211112 78898877778654 69875 78997 555443211
Q ss_pred -CCCCCC-CCccccCCCCCccCC--ccccCC----CCccccCCCCceecCCCcccc--cccccCC
Q psy952 339 -DEPLHC-NVDECAKVETNQCGH--KCVDTL----TGYYCECNTGYKLLEDGKACT--DIDECIE 393 (573)
Q Consensus 339 -de~~~c-~~~~C~~~~~~~C~~--~C~~~~----~~~~C~C~~~f~c~~~~~c~~--~~~~C~~ 393 (573)
+.. .| ++++|.. ....|.+ .|.+.. ++|.|.|+.+|. ..+..|-. ++++|..
T Consensus 94 ~dg~-~C~dideC~~-~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~-GdG~~Ce~d~DiDeC~~ 155 (634)
T 1yo8_A 94 TEKQ-VCEPENPCKD-KTHNCHKHAECIYLGHFSDPMYKCECQTGYA-GDGLICGEDSDLDGWPN 155 (634)
T ss_dssp SCCC-CEEECCTTTT-TCCCCCTTEEEEECCTTCSSSEEEEECTTEE-ESSSSEEECTTSSSSCS
T ss_pred cCCC-cccccccccC-CCcccccCccccccccccccceeeeccCCcc-ccCcccccccCcccccC
Confidence 112 34 3678876 5578976 899888 899999999997 33444543 5666643
No 316
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.26 Score=56.19 Aligned_cols=201 Identities=10% Similarity=0.024 Sum_probs=120.8
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc-ee
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RK 123 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~-~~ 123 (573)
..+..|+|++....|... ...+.|+.++..+......+ ..-..+..|++.+ ++.| ++-...+.|.+-++.... ..
T Consensus 18 ~~V~~lafspdg~~lAsg-s~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L-~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIA-TVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYL-VVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp SCEEEEEEETTTTEEEEE-ETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEE-EEEETTCEEEEEETTTCSEEE
T ss_pred CCcEEEEECCCCCEEEEE-eCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEE-EEEECcCeEEEEECCCCcEEE
Confidence 457899999876655554 45678888887654332222 2234678899987 5434 444457889999987543 33
Q ss_pred EeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe---------cCCCCCCCceEEEeccCCeEEEEe
Q psy952 124 TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT---------HEDDIAWPNALTLDYFTERLYWAD 194 (573)
Q Consensus 124 ~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~---------~~~~l~~P~glaiD~~~~~LYw~D 194 (573)
.+ ..-.....|+++|...+|+... ..+.|...++.+.....+.. ..........|++.+.+..+..+-
T Consensus 94 ~~-~~~~~V~~v~~sp~g~~l~sgs--~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 94 TV-FVPGKITSIDTDASLDWMLIGL--QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EE-ECSSCEEEEECCTTCSEEEEEE--TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EE-cCCCCEEEEEECCCCCEEEEEc--CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 33 2334578999999888887776 35677777776554321110 011223457899988665555565
Q ss_pred CCCCeEEEEeCCCCcEEEEEeCC-----------------ccceeEEEeee-CCeEEEecCCCCceEEEeccCCcce
Q psy952 195 AHLDYIASVDLDGKHKHIVISGQ-----------------KVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDY 253 (573)
Q Consensus 195 ~~~~~I~~~~~dG~~~~~l~~~~-----------------~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~ 253 (573)
...+.| ..++........+... ......+|++. ++.++.+-...+.|..-+..+|+..
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 667788 8887765443333211 01235677774 3555666556667766665565543
No 317
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.50 E-value=0.0012 Score=51.91 Aligned_cols=75 Identities=27% Similarity=0.626 Sum_probs=52.8
Q ss_pred CCcccCCccccCCCeeeec--ceeeCCcCCCCCC-CCCCCCC-CCccccCCCCCccCC-ccccCCCCccccCCCCceecC
Q psy952 306 NSTCSSSQFRCNNGKCIDY--HLVCNKESDCEDD-SDEPLHC-NVDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLE 380 (573)
Q Consensus 306 ~~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~-sde~~~c-~~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~ 380 (573)
+++|...+..|.++.|+.. +|.|...++...+ .+.. .| ++++|.. .+..|.+ .|.+..++|.|.|+.+|....
T Consensus 3 ideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~-~C~dideC~~-~~~~C~~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMK-NCMDIDECQR-DPLLCRGGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp CCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSS-SEEECCHHHH-CSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred cccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCC-ccCCcccccC-CCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence 4567766666877788765 6888766555422 1223 44 5788876 5556776 899999999999999998765
Q ss_pred CC
Q psy952 381 DG 382 (573)
Q Consensus 381 ~~ 382 (573)
.+
T Consensus 81 ~~ 82 (86)
T 1lmj_A 81 NI 82 (86)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 318
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.49 E-value=0.0016 Score=45.46 Aligned_cols=39 Identities=26% Similarity=0.688 Sum_probs=32.4
Q ss_pred CCCccCCccccCCCCccccCCCCceecCCCccccccccc
Q psy952 353 ETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391 (573)
Q Consensus 353 ~~~~C~~~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C 391 (573)
.+..|.+.|.|..+++.|.|+.+|++..+++.|.++++|
T Consensus 4 ~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 4 DNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp TTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 456788899999999999999999998877767666554
No 319
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.47 E-value=0.97 Score=48.46 Aligned_cols=29 Identities=21% Similarity=0.325 Sum_probs=21.3
Q ss_pred EEEEEcCCCEEEEEECC---------------CCeEEEEEcCCC
Q psy952 49 AMDFHYKENRFYFADVA---------------AKTIYRSRVGST 77 (573)
Q Consensus 49 ~v~~d~~~~~ly~~d~~---------------~~~I~~~~~~g~ 77 (573)
.++||+..+.|||.... .+.|+.++++.+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG 282 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTG 282 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTC
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCC
Confidence 47899999999997632 135888887654
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.44 E-value=0.41 Score=44.23 Aligned_cols=151 Identities=11% Similarity=0.031 Sum_probs=89.6
Q ss_pred EEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCC-------CceeEecc-CCCCcceEEEeCCCceEEEEecCCcC
Q psy952 82 VIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG-------TNRKTLKT-AIQDPRGITLHPGIGYVYFSSWNLQA 153 (573)
Q Consensus 82 i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg-------~~~~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~ 153 (573)
+-..++.....||+++ ++.||.. ..+.+++.+... ...+.|-. +...-..|.+|| +|.||... ..
T Consensus 35 iG~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~---dG 107 (236)
T 1tl2_A 35 IGKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVS---KD 107 (236)
T ss_dssp EESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEE---TT
T ss_pred cCccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeC---CC
Confidence 3333577888999999 8899999 567899988743 11222322 333468999998 89999984 47
Q ss_pred eEEEEec--cCCC-----cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CC------cEEEEEeCCcc
Q psy952 154 YIGKIGM--DGSN-----FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GK------HKHIVISGQKV 219 (573)
Q Consensus 154 ~I~r~~l--dG~~-----~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~------~~~~l~~~~~~ 219 (573)
.|+|.+. ++.. ..+|. ...-..-..|.++ .++.||-+. .+++++...- +. ...++.....-
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg--~~gw~~~~~lff~-p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~ 182 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVG--SGGWSGFKFLFFH-PNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWD 182 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEE--CSSGGGEEEEEEC-TTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGG
T ss_pred EEEEeCCCcCCCCceeccccEec--cCCCCceEEEEEC-CCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcc
Confidence 8999876 3332 12333 2222233678888 478888887 5556554332 22 12333322211
Q ss_pred ceeEEEeeeCCeEEEecCCCCceEEEe
Q psy952 220 PHVFALTLFEDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 220 ~~p~~ia~~~~~lywtd~~~~~I~~~~ 246 (573)
..+.-+.-.++.||+.. .++|++..
T Consensus 183 ~yr~l~f~~~G~l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 183 TFKFLFFSSVGTLFGVQ--GGKFYEDY 207 (236)
T ss_dssp GEEEEEECTTSCEEEEE--TTEEEEES
T ss_pred eEEEEEECCCCcEEEEe--CCeEEecC
Confidence 12222222356677777 66777764
No 321
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.46 Score=48.41 Aligned_cols=208 Identities=9% Similarity=-0.035 Sum_probs=115.3
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCC---Cc-c--eEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEc
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGS---TE-K--ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAEL 117 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g---~~-~--~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~l 117 (573)
...+.+|+|.+.++.++++-...+.|...++.. .. . ..... ....+..|++.+.++ ++++-...+.|.+.++
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSSTVTQITMIPNFD-AFAVSSKDGQIIVLKV 140 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSSCEEEEEECTTSS-EEEEEETTSEEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEe
Confidence 356889999984555666666778898888754 21 1 11222 235788899986444 4445455678888777
Q ss_pred ----CCCceeEecc------------CCCCcceEE--EeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCC-CCCCC
Q psy952 118 ----DGTNRKTLKT------------AIQDPRGIT--LHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHED-DIAWP 178 (573)
Q Consensus 118 ----dg~~~~~l~~------------~~~~P~~Ia--vdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~-~l~~P 178 (573)
.|...+.+.. .......++ ..+...+|+... ....|...++........+. .. .-...
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~-~~~h~~~v 217 (437)
T 3gre_A 141 NHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT--NLSRVIIFDIRTLERLQIIE-NSPRHGAV 217 (437)
T ss_dssp EEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE--TTSEEEEEETTTCCEEEEEE-CCGGGCCE
T ss_pred ccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCeeeEEEc-cCCCCCce
Confidence 3433322210 111223333 234333444433 35677777776544333331 11 23456
Q ss_pred ceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEe-CCccceeEEEeee-----CCeEEEecCCCCceEEEeccCCcc
Q psy952 179 NALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVIS-GQKVPHVFALTLF-----EDHIYWTDWNTKSINRADKFNGRD 252 (573)
Q Consensus 179 ~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~-~~~~~~p~~ia~~-----~~~lywtd~~~~~I~~~~~~~g~~ 252 (573)
..|++++.+..|+.+ ...+.|...++.......... .. ......|++. ++.++++-...+.|...+..+++.
T Consensus 218 ~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 218 SSICIDEECCVLILG-TTRGIIDIWDIRFNVLIRSWSFGD-HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EEEEECTTSCEEEEE-ETTSCEEEEETTTTEEEEEEBCTT-CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEE-cCCCeEEEEEcCCccEEEEEecCC-CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 789998765555554 456778888876543322222 21 2234555332 244666666667787777767766
Q ss_pred eEEEcc
Q psy952 253 YRVLRN 258 (573)
Q Consensus 253 ~~~l~~ 258 (573)
...+..
T Consensus 296 ~~~~~~ 301 (437)
T 3gre_A 296 QYAFIN 301 (437)
T ss_dssp EEEEES
T ss_pred EEEEEc
Confidence 665544
No 322
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=96.39 E-value=0.66 Score=46.98 Aligned_cols=214 Identities=16% Similarity=0.174 Sum_probs=116.9
Q ss_pred ceEEEEEEcC--CCEEEEEECCCCeEEEEEcCCCcceEEEcC------------------CCCCcceeEEeec-CCcEEE
Q psy952 46 NVVAMDFHYK--ENRFYFADVAAKTIYRSRVGSTEKERVIRH------------------DSHGLEGLAVDWV-GRKLYW 104 (573)
Q Consensus 46 ~~~~v~~d~~--~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~------------------~~~~p~glavD~~-~~~LY~ 104 (573)
.+.+|++++. .+.||+.-. .+.|+|..-.|...+.+... .......|++|+. .+.||+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 4668899874 577877543 45788876555554443210 0113457888874 467888
Q ss_pred EeCCCCeEEEEEcCCCceeEeccCC-------------CCcceEEEeCCC-ceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 105 LDRHSKQLDVAELDGTNRKTLKTAI-------------QDPRGITLHPGI-GYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 105 td~~~~~I~~~~ldg~~~~~l~~~~-------------~~P~~Iavdp~~-g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
.... +.|++..-.|..-+.+...+ ..+..|+++|.+ +.||+.. ...|++..-.|..-+.+.
T Consensus 195 g~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~---~~gl~~s~D~G~tW~~~~- 269 (394)
T 3b7f_A 195 GMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN---HCGIYRMDRREGVWKRIG- 269 (394)
T ss_dssp EEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE---TTEEEEEETTTTEEECGG-
T ss_pred EECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc---CCeEEEeCCCCCcceECC-
Confidence 7532 45777665565544433211 236789999963 6787765 345887765554332221
Q ss_pred cCCCCCC-----CceEEEecc-CCeEEEEeC------------CCCeEEEEeCCCCcEEEEEeCCcccee--------EE
Q psy952 171 HEDDIAW-----PNALTLDYF-TERLYWADA------------HLDYIASVDLDGKHKHIVISGQKVPHV--------FA 224 (573)
Q Consensus 171 ~~~~l~~-----P~glaiD~~-~~~LYw~D~------------~~~~I~~~~~dG~~~~~l~~~~~~~~p--------~~ 224 (573)
..+.. ...|++|+. .+.||++-. ....|++..-.|..-+.+..+ ++.+ .+
T Consensus 270 --~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~g--lp~~~~~~~~~~~~ 345 (394)
T 3b7f_A 270 --DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG--LPTDQAWLTVKRQA 345 (394)
T ss_dssp --GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBT--SCCSSCCCCCCTBS
T ss_pred --CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCC--CCCccccceEEEEE
Confidence 22221 235777763 567887631 123566644334433433322 2321 24
Q ss_pred Eeee---CCeEEEecCCCCceEEEeccCCcceEEEcccCCCceeeeeeec
Q psy952 225 LTLF---EDHIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHP 271 (573)
Q Consensus 225 ia~~---~~~lywtd~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i~v~~~ 271 (573)
|++. .+.||+.- ..+.|++.. ..|...+.+...+.....|.+..|
T Consensus 346 ~~~~p~~~~~l~~g~-~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~~~ 393 (394)
T 3b7f_A 346 MTADAHAPVGVYFGT-TGGEIWASA-DEGEHWQCIASHLPHIYAVQSARP 393 (394)
T ss_dssp EEECCSSSCCEEEEC-TTSCEEEES-STTSBCEEEECSCSCEEEEEEECC
T ss_pred EEECCCCCCEEEEEe-CCCeEEEEC-CCCCCceEcccCCCCeeEEEEecC
Confidence 5553 24577753 345677653 567777777666655555554433
No 323
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.62 Score=45.87 Aligned_cols=158 Identities=9% Similarity=-0.005 Sum_probs=95.0
Q ss_pred cceEEEEEEc--CCCEEEEEECCCCeEEEEEcCCCcceEEEcCC-CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCc
Q psy952 45 LNVVAMDFHY--KENRFYFADVAAKTIYRSRVGSTEKERVIRHD-SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN 121 (573)
Q Consensus 45 ~~~~~v~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~-~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~ 121 (573)
..+..|++++ .++ ++++-...+.|..+++.......+.... ...+..+++.+. +.++.+-...+.|.+.++....
T Consensus 126 ~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp SCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEECTTSCEEEEESSCTT
T ss_pred CCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCC
Confidence 4588999987 444 4555556778999998765543333222 235788899874 4555665677899999987655
Q ss_pred ee--Eecc-CCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCC---ceEEEeccCCeEEEEeC
Q psy952 122 RK--TLKT-AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWP---NALTLDYFTERLYWADA 195 (573)
Q Consensus 122 ~~--~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P---~glaiD~~~~~LYw~D~ 195 (573)
.. .+.. .......|+++|...+|..+. . . .|...++........+.....-..+ ..+++++.+..|..+..
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 33 3333 456688999999666666555 2 2 6777776544321111000000012 24999987777777555
Q ss_pred CCCeEEEEeCCC
Q psy952 196 HLDYIASVDLDG 207 (573)
Q Consensus 196 ~~~~I~~~~~dG 207 (573)
..+.|...+++.
T Consensus 281 ~d~~i~v~~~~~ 292 (343)
T 3lrv_A 281 ESNSLTIYKFDK 292 (343)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCcEEEEEEcc
Confidence 466666666643
No 324
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.32 E-value=1.8 Score=48.24 Aligned_cols=224 Identities=10% Similarity=0.102 Sum_probs=126.4
Q ss_pred EEEEEec-ccEEEEEcCCCceeecc--cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC-----C--C
Q psy952 18 WLIFSNK-YYVRNMSLDATQYSLVH--QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH-----D--S 87 (573)
Q Consensus 18 ~l~~s~~-~~I~~i~l~g~~~~~~~--~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~-----~--~ 87 (573)
.|.++.. ..|++++.....+.... .....+..|..|. .+.||+..... .|++++..+...+.+... . .
T Consensus 185 ~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lwigt~~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (795)
T 4a2l_A 185 QIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQS-PTRIWVATEGA-GLFLINPKTKEIKNYLHSPSNPKSISS 262 (795)
T ss_dssp EEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEE-TTEEEEEEBSS-CEEEEETTTTEEEEECCCTTCTTSCSC
T ss_pred CEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcC-CCCEEEEECCC-CeEEEeCCCCeEEEeecCCCCccccCC
Confidence 3444443 47888887665544331 1234467788884 67777765444 488888766544333221 1 1
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEecc------CC--CCcceEEEeCCCceEEEEecCCcCeEEEEe
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT------AI--QDPRGITLHPGIGYVYFSSWNLQAYIGKIG 159 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~------~~--~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ 159 (573)
..+..|+.|. .+.|++.... .|.+++........+.. .+ ...+.|..|+ .|.|++... ...|.+.+
T Consensus 263 ~~i~~i~~d~-~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~lWigt~--~~Gl~~~~ 336 (795)
T 4a2l_A 263 NYIRSLAMDS-QNRLWIGTFN--DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGGMWLGTY--FGGLNYYH 336 (795)
T ss_dssp SBEEEEEECT-TSCEEEEESS--CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSCEEEEES--SSCEEEEC
T ss_pred CeEEEEEEcC-CCCEEEEeCC--hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcCEEEEEC--CCCeEEeC
Confidence 3567788884 5677776543 57888876555444431 12 2377899998 677777653 34577777
Q ss_pred ccCCCcEEEEecC--CCCC--CCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeC------C-ccceeEEEeee
Q psy952 160 MDGSNFTRILTHE--DDIA--WPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG------Q-KVPHVFALTLF 228 (573)
Q Consensus 160 ldG~~~~~l~~~~--~~l~--~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~------~-~~~~p~~ia~~ 228 (573)
......+.+.... ..+. ...+|+.| .++.||++.. .+.|.+++......+.+... . ......+|+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~l~~~~V~~i~~d-~~g~lWiGt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d 414 (795)
T 4a2l_A 337 PIRNRFKNIRNIPYKNSLSDNVVSCIVED-KDKNLWIGTN-DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVD 414 (795)
T ss_dssp GGGGSSEEECCCTTSSSCSCSSEEEEEEC-TTSCEEEEES-SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEE
T ss_pred CCcccceEEcCCCCCCCCCCCeeEEEEEC-CCCCEEEEEC-CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEc
Confidence 6554444433100 1121 23467777 4677887654 34577777765544433211 0 02345677775
Q ss_pred -CCe-EEEecCCCCceEEEeccCCcc
Q psy952 229 -EDH-IYWTDWNTKSINRADKFNGRD 252 (573)
Q Consensus 229 -~~~-lywtd~~~~~I~~~~~~~g~~ 252 (573)
++. ||+.- ..+.|+++++.+++.
T Consensus 415 ~~g~~lWigt-~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 415 EKKSLVYIGT-HAGGLSILHRNSGQV 439 (795)
T ss_dssp TTTTEEEEEE-TTTEEEEEETTTCCE
T ss_pred CCCCEEEEEe-CcCceeEEeCCCCcE
Confidence 456 55543 345688887666543
No 325
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=96.30 E-value=0.0062 Score=52.22 Aligned_cols=105 Identities=23% Similarity=0.558 Sum_probs=65.0
Q ss_pred cccc--cccccccCccceee-eccceeecCCCCCCCcccCCccccC-CCeeeec--ceeeCCcCCCCCCCCCCCCCC--C
Q psy952 275 TTRH--AWLTAHRGSTTVAD-MIRSVYLGSGNKENSTCSSSQFRCN-NGKCIDY--HLVCNKESDCEDDSDEPLHCN--V 346 (573)
Q Consensus 275 ~Cs~--lCl~~~~~~~~~~C-Cp~~~~l~~d~~~~~~C~~~~~~C~-~g~Ci~~--~~~cd~~~~c~d~sde~~~c~--~ 346 (573)
.|.+ .|+... .+|+| |+.+|....-...+.+|... .|. ++.|+.. .|.|...++.. .. .|. +
T Consensus 14 ~C~~~g~C~~~~---g~~~C~C~~Gy~G~~C~~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~----G~-~C~~~~ 83 (135)
T 2vj3_A 14 PCEHAGKCINTL---GSFECQCLQGYTGPRCEIDVNECVSN--PCQNDATCLDQIGEFQCICMPGYE----GV-HCEVNT 83 (135)
T ss_dssp SSSTTCEEEECS---SSEEEECCTTEESTTSCEECCTTTTC--CCCSSCEEEECSSCEEEECCTTEE----SS-SSCEEC
T ss_pred CCCCCCEeECCC---CCEEEECCCCCcCCcccccCccCCCC--CCCCCCEEeCCCCCceeeCCCCCc----CC-cceecC
Confidence 4544 566655 56999 99999754322225667653 354 4678865 67885444432 22 443 5
Q ss_pred ccccCCCCCccCC--ccccCCCCccccCCCCceecCCCcccccccccCCCC
Q psy952 347 DECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDIDECIEQP 395 (573)
Q Consensus 347 ~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~~~~ 395 (573)
++|.. ..|.+ .|.+..+.+.|.|+.+|. +..|-.++++|...+
T Consensus 84 ~~C~~---~~C~~~g~C~~~~g~~~C~C~~G~~---G~~C~~~i~~C~~~~ 128 (135)
T 2vj3_A 84 DECAS---SPCLHNGRCLDKINEFQCECPTGFT---GHLCQVDLHHILDAQ 128 (135)
T ss_dssp CTTTT---CCSTTTCEEEECSSCEEEECCTTEE---SSSSCEECC------
T ss_pred CcccC---CCcCCCCEeECCCCCeEEECCCCCc---CCccCccCccccCCC
Confidence 67754 46776 799999999999999997 445656777776443
No 326
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.25 E-value=1.8 Score=47.28 Aligned_cols=76 Identities=8% Similarity=-0.040 Sum_probs=47.3
Q ss_pred ceEEEeccCCeEEEEeC-----------------------------------CCCeEEEEeCCCCcEEE-EEeCCcccee
Q psy952 179 NALTLDYFTERLYWADA-----------------------------------HLDYIASVDLDGKHKHI-VISGQKVPHV 222 (573)
Q Consensus 179 ~glaiD~~~~~LYw~D~-----------------------------------~~~~I~~~~~dG~~~~~-l~~~~~~~~p 222 (573)
.++++|+..+.+|+... ..+.|..+|+......- +.... ...-
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcC
Confidence 35899999999998421 11567777765443322 22221 1112
Q ss_pred EEEeeeCCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 223 FALTLFEDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 223 ~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
..++..++.||+.+ ..+.|+.++..+|+..-.+
T Consensus 463 ~~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 463 GTLSTAGNLVFQGT-AAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp CEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred ceeEeCCCEEEEEC-CcccchhhhhhcChhheEe
Confidence 34556788888884 5688999998888766444
No 327
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.24 Score=55.12 Aligned_cols=200 Identities=7% Similarity=-0.034 Sum_probs=114.2
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE--EEcCCCCCcceeEEeecC-CcEEEEeCCCCeEEEEEcCCCc
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER--VIRHDSHGLEGLAVDWVG-RKLYWLDRHSKQLDVAELDGTN 121 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--i~~~~~~~p~glavD~~~-~~LY~td~~~~~I~~~~ldg~~ 121 (573)
..+..|+|++.++.|+.+ ...+.|..+++.+..... .+......+..|++.+.. ++++++-...+.|.+.++.+..
T Consensus 10 ~~V~~l~~s~dg~~latg-~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATC-SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCEEEECCCSSSCCEEEE-ETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred ceeEEEEECCCCCeEEEE-ECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 457788898766655554 456778888876432222 233233567778876541 4555555567889999987654
Q ss_pred ee---EeccCCCCcceEEEeCC--CceEEEEecCCcCeEEEEeccCCC--cEEEEecCCCCCCCceEEEecc--------
Q psy952 122 RK---TLKTAIQDPRGITLHPG--IGYVYFSSWNLQAYIGKIGMDGSN--FTRILTHEDDIAWPNALTLDYF-------- 186 (573)
Q Consensus 122 ~~---~l~~~~~~P~~Iavdp~--~g~LYwtd~~~~~~I~r~~ldG~~--~~~l~~~~~~l~~P~glaiD~~-------- 186 (573)
.. .+.........|+++|. ...|+... ..+.|...++.... ..... .........+++.+.
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~--~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEE--ECCSSCEEEEEECCCC-------
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEe--ecCCCceEEEEecCccccccccc
Confidence 22 22234556889999996 44454444 35677777766542 22222 233334567777764
Q ss_pred ----CCeEEEEeCCCCeEEEEeCCCCc-E-EEEE--eCCccceeEEEeeeC----CeEEEecCCCCceEEEeccCC
Q psy952 187 ----TERLYWADAHLDYIASVDLDGKH-K-HIVI--SGQKVPHVFALTLFE----DHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 187 ----~~~LYw~D~~~~~I~~~~~dG~~-~-~~l~--~~~~~~~p~~ia~~~----~~lywtd~~~~~I~~~~~~~g 250 (573)
++.++++-...+.|...++.... . ..+. .+. .....+|++.. +.++++-...+.|...+..++
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 24444454556777777665432 2 2221 121 23466777742 456666555666766665554
No 328
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.19 E-value=0.00095 Score=59.39 Aligned_cols=101 Identities=20% Similarity=0.376 Sum_probs=60.5
Q ss_pred ccccccccCccceee-eccceeecCCCCC---CCc--ccCCcccc---CCCeeeec------ceeeCCcCC---------
Q psy952 278 HAWLTAHRGSTTVAD-MIRSVYLGSGNKE---NST--CSSSQFRC---NNGKCIDY------HLVCNKESD--------- 333 (573)
Q Consensus 278 ~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~---~~~--C~~~~~~C---~~g~Ci~~------~~~cd~~~~--------- 333 (573)
+.|+..+ .+|+| |+.||.+..+++. +.+ |......| .++.|+.. .|.|....+
T Consensus 15 ~~C~n~~---gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~ 91 (162)
T 1uzk_A 15 GNCVNTP---GSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEM 91 (162)
T ss_dssp SEEEEET---TEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEE
T ss_pred CEeECCC---CCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCccc
Confidence 5777776 67999 9999998776665 333 65433222 23455542 344432221
Q ss_pred ------------CCC--C----CCCCCCC-CCccccCCCCCccCC-ccccCCCCccccCCCCceecCCCc
Q psy952 334 ------------CED--D----SDEPLHC-NVDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLEDGK 383 (573)
Q Consensus 334 ------------c~d--~----sde~~~c-~~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~~~~ 383 (573)
|.. + .+.. .| ++++|.. .+..|.+ .|.|+.++|.|.|+.+|.....++
T Consensus 92 C~~~~~~~y~C~C~~g~G~~~~~~~~-~c~dideC~~-~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~ 159 (162)
T 1uzk_A 92 CPAVNTSEYKILCPGGEGFRPNPITV-ILEDIDECQE-LPGLCQGGKCINTFGSFQCRCPTGYYLNEDTR 159 (162)
T ss_dssp CCCTTSHHHHHHCTTCTTEEECTTTC-CEEECCHHHH-CGGGGBTSEEEECSSCEEEECCTTCCBCTTTC
T ss_pred CCCCCCCCceeECCCCCCcccCCCCC-ccCccccccC-CCCCcCCCEeEcCCCCEEeeCCCCccCCCCCC
Confidence 111 1 1111 22 5788876 4567887 899999999999999998876543
No 329
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.16 E-value=0.0017 Score=45.72 Aligned_cols=39 Identities=38% Similarity=0.783 Sum_probs=33.1
Q ss_pred CCCccCCccccCCC-CccccCCCCceecCCCccccccccc
Q psy952 353 ETNQCGHKCVDTLT-GYYCECNTGYKLLEDGKACTDIDEC 391 (573)
Q Consensus 353 ~~~~C~~~C~~~~~-~~~C~C~~~f~c~~~~~c~~~~~~C 391 (573)
.+..|.+.|.+..+ ++.|.|+.+|++..+++.|.++++|
T Consensus 5 ~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 5 ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 45678889999998 7999999999999887777777665
No 330
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.11 E-value=1.3 Score=44.19 Aligned_cols=217 Identities=11% Similarity=0.068 Sum_probs=114.5
Q ss_pred CEEEEEe-cccEEEEEcCCCce--eeccc---------CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc-ceEEE
Q psy952 17 PWLIFSN-KYYVRNMSLDATQY--SLVHQ---------DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE-KERVI 83 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~--~~~~~---------~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~i~ 83 (573)
..|+++. ...|+.+++...+. +.... .......++++ .++||+... .+.|+.++...+. .-..-
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GGHVYIGSE-KAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TTEEEEEET-TSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CCEEEEEcC-CCEEEEEECCCCCEEEEEe
Confidence 4566665 35788898864332 12111 11112344444 788888764 4678888876332 21121
Q ss_pred cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEc-CCCceeEecc--CC---CCcceEEEeCCCceEEEEecCCcCeEEE
Q psy952 84 RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAEL-DGTNRKTLKT--AI---QDPRGITLHPGIGYVYFSSWNLQAYIGK 157 (573)
Q Consensus 84 ~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~l-dg~~~~~l~~--~~---~~P~~Iavdp~~g~LYwtd~~~~~~I~r 157 (573)
... ......+++ .+.||+.. ..+.|..+++ +|..+-.... .. ......+++ .+.||+.. ....|..
T Consensus 131 ~~~-~~~~~p~~~--~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~--~~g~l~~ 202 (376)
T 3q7m_A 131 VAG-EALSRPVVS--DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGG--DNGRVSA 202 (376)
T ss_dssp CSS-CCCSCCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECC--TTTEEEE
T ss_pred CCC-ceEcCCEEE--CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEc--CCCEEEE
Confidence 111 111122333 56777764 4567888886 4544322211 10 011233444 46777754 2456777
Q ss_pred Eecc-CCCcEEEEecCCC---------CC-CCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEe
Q psy952 158 IGMD-GSNFTRILTHEDD---------IA-WPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALT 226 (573)
Q Consensus 158 ~~ld-G~~~~~l~~~~~~---------l~-~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia 226 (573)
.++. |..+-... ... +. .....+++ +++||+.. ..+.|..++........... ...+.+++
T Consensus 203 ~d~~tG~~~w~~~--~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~-~~g~l~~~d~~tG~~~w~~~---~~~~~~~~ 274 (376)
T 3q7m_A 203 VLMEQGQMIWQQR--ISQATGSTEIDRLSDVDTTPVVV--NGVVFALA-YNGNLTALDLRSGQIMWKRE---LGSVNDFI 274 (376)
T ss_dssp EETTTCCEEEEEE--CCC-----------CCCCCCEEE--TTEEEEEC-TTSCEEEEETTTCCEEEEEC---CCCEEEEE
T ss_pred EECCCCcEEEEEe--cccCCCCcccccccccCCCcEEE--CCEEEEEe-cCcEEEEEECCCCcEEeecc---CCCCCCce
Confidence 7764 43322221 010 00 01122333 68888875 45678888885433322222 34566788
Q ss_pred eeCCeEEEecCCCCceEEEeccCCcce
Q psy952 227 LFEDHIYWTDWNTKSINRADKFNGRDY 253 (573)
Q Consensus 227 ~~~~~lywtd~~~~~I~~~~~~~g~~~ 253 (573)
+.++.||++.. .+.|+.++..+|+.+
T Consensus 275 ~~~~~l~~~~~-~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 275 VDGNRIYLVDQ-NDRVMALTIDGGVTL 300 (376)
T ss_dssp EETTEEEEEET-TCCEEEEETTTCCEE
T ss_pred EECCEEEEEcC-CCeEEEEECCCCcEE
Confidence 88999999874 467999998888754
No 331
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.10 E-value=1.1 Score=44.86 Aligned_cols=195 Identities=11% Similarity=0.034 Sum_probs=112.8
Q ss_pred eEEEEEEcCCCEEEEEEC-CCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC-CCceeE
Q psy952 47 VVAMDFHYKENRFYFADV-AAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD-GTNRKT 124 (573)
Q Consensus 47 ~~~v~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld-g~~~~~ 124 (573)
+..|+|.+.++.|.++.. ..+.|+..++........+... ..+.+|++.+.++.|..+. .+.+.+.+.. +.....
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-GEVKDLHFSTDGKVVAYIT--GSSLEVISTVTGSCIAR 212 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-SCCCEEEECTTSSEEEEEC--SSCEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-CceEEEEEccCCceEEecc--ceeEEEEEeccCcceee
Confidence 668999988888877654 4578888898765443333333 5688999988666555543 3456666543 443322
Q ss_pred ec--cCCCCcceEEEeCCCceEEEEecCCc--CeEEEEeccCCCcEEEE--ecCCCCCCCceEEEeccCCeEEEEeCCCC
Q psy952 125 LK--TAIQDPRGITLHPGIGYVYFSSWNLQ--AYIGKIGMDGSNFTRIL--THEDDIAWPNALTLDYFTERLYWADAHLD 198 (573)
Q Consensus 125 l~--~~~~~P~~Iavdp~~g~LYwtd~~~~--~~I~r~~ldG~~~~~l~--~~~~~l~~P~glaiD~~~~~LYw~D~~~~ 198 (573)
.. ..-...+.|++.|...+|..+..... ..|...++.......+. ...........|++.+++..|..+ ...+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg-s~D~ 291 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA-SNDN 291 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE-ETTS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE-cCCC
Confidence 22 22334788999996666655542221 23444444333222111 001233345688998766655554 3467
Q ss_pred eEEEEeCCCCcE-EEEEeCCccceeEEEeee-CCeEEEecCCCCceEEEe
Q psy952 199 YIASVDLDGKHK-HIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 199 ~I~~~~~dG~~~-~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~ 246 (573)
.|...++..... ..+..+. .....+|++. ++.++.|-...++|...+
T Consensus 292 ~V~iwd~~~~~~~~~~~~gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIFKQAH-SFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp CEEEEETTTTEEEEEETTSS-SSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCcEEEEecCcc-cCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 788888764433 3333332 3456788884 556667766667776655
No 332
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.09 E-value=0.24 Score=49.64 Aligned_cols=182 Identities=7% Similarity=-0.022 Sum_probs=100.7
Q ss_pred EEEEEe---cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce-EEEc-CCCCCcce
Q psy952 18 WLIFSN---KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE-RVIR-HDSHGLEG 92 (573)
Q Consensus 18 ~l~~s~---~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~i~~-~~~~~p~g 92 (573)
+|+++. ...|+..++........+.....+.+|+|.+.+..|..+. .+.+.++....+... .... ..-..+..
T Consensus 147 ~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 147 VAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp CEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc--ceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 454544 3568888887655443334445688999998776665543 345666665433222 1111 12235678
Q ss_pred eEEeecCCcEEEEeCCCC---eEEEEEcCCCceeE-----eccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCC
Q psy952 93 LAVDWVGRKLYWLDRHSK---QLDVAELDGTNRKT-----LKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSN 164 (573)
Q Consensus 93 lavD~~~~~LY~td~~~~---~I~~~~ldg~~~~~-----l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~ 164 (573)
+++.+.+..|..+....+ .|...++....... +.........|+++|...+|.... ....|...++....
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs--~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS--NDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE--TTSCEEEEETTTTE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc--CCCEEEEEECCCCc
Confidence 888886666665543221 34455554333222 223444578999999666555444 34567766665332
Q ss_pred c-EEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC
Q psy952 165 F-TRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 206 (573)
Q Consensus 165 ~-~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d 206 (573)
. ..+. ..--....+|++.|++. +..+-+..+.|...++.
T Consensus 303 ~~~~~~--~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 303 MSKIFK--QAHSFAITEVTISPDST-YVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEET--TSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECC
T ss_pred EEEEec--CcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcC
Confidence 2 2222 12233457899987554 44454556666666653
No 333
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.02 E-value=2.1 Score=45.83 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=47.5
Q ss_pred ceEEEeccCCeEEEEeC------------------------------------CCCeEEEEeCC-CCcEEEEEeCCccce
Q psy952 179 NALTLDYFTERLYWADA------------------------------------HLDYIASVDLD-GKHKHIVISGQKVPH 221 (573)
Q Consensus 179 ~glaiD~~~~~LYw~D~------------------------------------~~~~I~~~~~d-G~~~~~l~~~~~~~~ 221 (573)
.++++|+..++||+... ..+.|..+++. |..+-.+.... ...
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~ 467 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAW 467 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-Ccc
Confidence 46899999999999742 23567777765 33333322221 111
Q ss_pred eEEEeeeCCeEEEecCCCCceEEEeccCCcceEEEc
Q psy952 222 VFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 222 p~~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l~ 257 (573)
...++..++.||+.. ..+.|+.++..+|+.+-.+.
T Consensus 468 ~~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 468 GGTLYTKGGLVWYAT-LDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp SBCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred ceeEEECCCEEEEEc-CCCeEEEEECCCCCEEEEEe
Confidence 112344578888864 46789999988888765443
No 334
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.97 E-value=1.2 Score=42.62 Aligned_cols=248 Identities=8% Similarity=-0.012 Sum_probs=131.8
Q ss_pred ceeeCCCCCCEEEEEecccEEEEEcCCCceeecc---cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc
Q psy952 8 TCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVH---QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR 84 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~---~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~ 84 (573)
+|.+.+ +..+|.++..+.|+..++...+....+ .....+.+|+|.+.++.|. +-...+.|...++........+.
T Consensus 29 ~~l~WS-~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~-sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWS-SGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA-VGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEEC-TTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEC-CCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEE-EEECCCcEEEeecCCceeEEEec
Confidence 555554 345777777888999998765443222 2234578999998665554 55567789888887654333332
Q ss_pred CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce--eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccC
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR--KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG 162 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~--~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG 162 (573)
.. ...-.++.+... +..+-...+.+.......... ..+.........+++.+...+|+... ....|...++..
T Consensus 107 ~h--~~~~~~~~~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~ 181 (318)
T 4ggc_A 107 SH--SARVGSLSWNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG--NDNLVNVWPSAP 181 (318)
T ss_dssp CC--SSCEEEEEEETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEESSC
T ss_pred Cc--cceEEEeecCCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe--cCcceeEEECCC
Confidence 22 222334444344 444444556666666554332 22334455577788888655554443 244555555432
Q ss_pred CC-c---EEEEecCCCCCCCceEEEeccCCeEEEE--eCCCCeEEEEeCCCCcEEEEEeCCccceeEEEee--eCCeEEE
Q psy952 163 SN-F---TRILTHEDDIAWPNALTLDYFTERLYWA--DAHLDYIASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYW 234 (573)
Q Consensus 163 ~~-~---~~l~~~~~~l~~P~glaiD~~~~~LYw~--D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~--~~~~lyw 234 (573)
.. . .... .........++..+....+.+. ....+.|...+............. .....+.+ .++.++.
T Consensus 182 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 182 GEGGWVPLQTF--TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELIS 257 (318)
T ss_dssp BTTBSCCSEEE--CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS--SCEEEEEEETTTTEEEE
T ss_pred Ccccccceeee--cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce--eeeeeeeecccccceEE
Confidence 11 1 1111 1222223456666656555443 234456776676655554443332 23344444 3455554
Q ss_pred e-cCCCCceEEEeccCCcceEEEcccCCCceee
Q psy952 235 T-DWNTKSINRADKFNGRDYRVLRNTTHRPYDI 266 (573)
Q Consensus 235 t-d~~~~~I~~~~~~~g~~~~~l~~~~~~p~~i 266 (573)
+ -...+.|...+..+++....+.........|
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 290 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 4 3355677777777777666664433333333
No 335
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.96 E-value=0.55 Score=48.41 Aligned_cols=121 Identities=5% Similarity=-0.080 Sum_probs=80.2
Q ss_pred ceEEEEEEcCCCEEEE---EECCCCeEEEEEcCCC-----cc----eEE--EcCCCCCcceeEEeecCCcEEEEeCCCCe
Q psy952 46 NVVAMDFHYKENRFYF---ADVAAKTIYRSRVGST-----EK----ERV--IRHDSHGLEGLAVDWVGRKLYWLDRHSKQ 111 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~---~d~~~~~I~~~~~~g~-----~~----~~i--~~~~~~~p~glavD~~~~~LY~td~~~~~ 111 (573)
.+..|+|++.++.|++ +-...+.|+.+++... .. ..+ +...-..+.+|++.+..++++.+-...+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 4889999998888887 4445678888886532 11 111 11113468889998876788887777889
Q ss_pred EEEEEcCCCceeE-eccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEE
Q psy952 112 LDVAELDGTNRKT-LKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRI 168 (573)
Q Consensus 112 I~~~~ldg~~~~~-l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l 168 (573)
|.+.++....... .......+..|+++|...+|+... ..+.|...++.|.....+
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs--~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK--QNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE--TTSCEEEECTTCCEEEEE
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc--CCCcEEEEccCCcccccc
Confidence 9999987653221 222344689999999766666655 356788888875444333
No 336
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.90 E-value=0.0045 Score=48.60 Aligned_cols=73 Identities=29% Similarity=0.714 Sum_probs=47.3
Q ss_pred CCcccCCccccCCCeeeec--ceeeCCcCCCCCCCCCCCCC-CCccccCCCCCccCCccccCCCCccccCC--CCceecC
Q psy952 306 NSTCSSSQFRCNNGKCIDY--HLVCNKESDCEDDSDEPLHC-NVDECAKVETNQCGHKCVDTLTGYYCECN--TGYKLLE 380 (573)
Q Consensus 306 ~~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~sde~~~c-~~~~C~~~~~~~C~~~C~~~~~~~~C~C~--~~f~c~~ 380 (573)
+++|...+..|.++.|+.. +|.|...++.....+.. .| ++++|.. ..|...|.+..++|.|.|+ .+|.|..
T Consensus 3 ideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~-~C~dideC~~---~~C~~~C~n~~g~y~C~C~g~~G~~~~~ 78 (87)
T 1z6c_A 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSK-SCEDIDECSE---NMCAQLCVNYPGGYTCYCDGKKGFKLAQ 78 (87)
T ss_dssp SCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTT-EEECCCHHHH---SCCSSEECCCSSSCCEECCSSSCCBCCT
T ss_pred cccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCC-cCCCcCeeCC---CCCCCEEEccCCCEEEECCCCcCCcccC
Confidence 3456555545655667654 57776555554333333 34 4678854 5687899999999999994 7888765
Q ss_pred CC
Q psy952 381 DG 382 (573)
Q Consensus 381 ~~ 382 (573)
..
T Consensus 79 ~~ 80 (87)
T 1z6c_A 79 DQ 80 (87)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 337
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.86 E-value=0.0094 Score=46.72 Aligned_cols=47 Identities=43% Similarity=0.942 Sum_probs=35.6
Q ss_pred CccccCCCCCccCC-ccccCCCCccccCCCCceecCCCcccccccccCC
Q psy952 346 VDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLEDGKACTDIDECIE 393 (573)
Q Consensus 346 ~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~~ 393 (573)
+++|.. .+..|.+ .|.+..++|.|.|+.+|+....++-+.++++|..
T Consensus 3 ideC~~-~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~ 50 (87)
T 1z6c_A 3 VDECSL-KPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE 50 (87)
T ss_dssp SCSSSS-SSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHH
T ss_pred cccccC-CCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCC
Confidence 567765 4445744 8999999999999999998765555578888853
No 338
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.84 E-value=1.5 Score=42.81 Aligned_cols=223 Identities=10% Similarity=0.041 Sum_probs=110.3
Q ss_pred cccEEEEEcCCCcee---ec-cc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc-------ceEEEcCCCCCcc
Q psy952 24 KYYVRNMSLDATQYS---LV-HQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE-------KERVIRHDSHGLE 91 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~---~~-~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~-------~~~i~~~~~~~p~ 91 (573)
...|+..++...... .+ .. ....+.+|+|.+..+.|. +-...+.|...++.... ....+......+.
T Consensus 33 D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 33 DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEETTSCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 467888888654322 22 11 234588999998665554 44456677777764311 1112222335678
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcC-CC-c---eeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELD-GT-N---RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT 166 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ld-g~-~---~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~ 166 (573)
.|++.+.++.| .+-...+.|.+.++. +. . ..++.........|+++|...+|.-... ...|..-++.....+
T Consensus 112 ~v~~sp~g~~l-as~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~--D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 112 GVAWSNDGYYL-ATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY--DDTVRIWKDYDDDWE 188 (330)
T ss_dssp EEEECTTSCEE-EEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET--TSCEEEEEEETTEEE
T ss_pred EEEECCCCCEE-EEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC--CCeEEEEECCCCCee
Confidence 89998755444 454556789888884 21 1 1223344456789999996555544432 334444333322111
Q ss_pred EEEecCCCCCCCceEEEeccC-CeEEEEeCCCCeEEEEeCCCC-----cE-EEEE--eCCccceeEEEeeeCCeEEEecC
Q psy952 167 RILTHEDDIAWPNALTLDYFT-ERLYWADAHLDYIASVDLDGK-----HK-HIVI--SGQKVPHVFALTLFEDHIYWTDW 237 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~-~~LYw~D~~~~~I~~~~~dG~-----~~-~~l~--~~~~~~~p~~ia~~~~~lywtd~ 237 (573)
.+......-.....+++.+.. +.+..+-...+.|...++.+. .. ..+. ..........|++..+.++.+-.
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~ 268 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVG 268 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEe
Confidence 111102222344677887653 233334344555555544321 11 1111 11112345666665444555544
Q ss_pred CCCceEEEeccCC
Q psy952 238 NTKSINRADKFNG 250 (573)
Q Consensus 238 ~~~~I~~~~~~~g 250 (573)
..+.|...+..++
T Consensus 269 ~dg~v~iw~~~~~ 281 (330)
T 2hes_X 269 ADGVLAVYEEVDG 281 (330)
T ss_dssp TTSCEEEEEEETT
T ss_pred CCCEEEEEEcCCC
Confidence 5566655554444
No 339
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.84 E-value=1.2 Score=50.71 Aligned_cols=192 Identities=9% Similarity=-0.044 Sum_probs=114.6
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH 85 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~ 85 (573)
.+|.+......+|+.+. ...|+..+..+............+..|+|.+ ++.|+ +-...+.|...++........+..
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~~~~~~~~ 97 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQKVLTTVFV 97 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCSEEEEEEC
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCcEEEEEcC
Confidence 45555443334565554 4577777776654433333445688999998 55344 444667899999876443222222
Q ss_pred CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEe------------ccCCCCcceEEEeCCCceEEEEecCCcC
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTL------------KTAIQDPRGITLHPGIGYVYFSSWNLQA 153 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l------------~~~~~~P~~Iavdp~~g~LYwtd~~~~~ 153 (573)
. ..+..+++++.++.|+... ..+.|.+.++.+.....+ .........|+++|..+.++.+-. ...
T Consensus 98 ~-~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~-~dg 174 (902)
T 2oaj_A 98 P-GKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY-EYV 174 (902)
T ss_dssp S-SCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC-SSC
T ss_pred C-CCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe-CCC
Confidence 2 4688899998777777765 467899999886553211 112345789999996544444432 345
Q ss_pred eEEEEeccCCCcEEEEecCCC------------------CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 154 YIGKIGMDGSNFTRILTHEDD------------------IAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 154 ~I~r~~ldG~~~~~l~~~~~~------------------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
.| ..++........+ ... -.....+++.+.+. ++.+-...+.|...++..
T Consensus 175 ~v-lWd~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSF--IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EE-EEETTTTEEEEEE--CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTT
T ss_pred cE-EEECCCCceEEEE--ecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCC
Confidence 66 6666544332222 111 12346788887644 444545567777777754
No 340
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.80 E-value=1.7 Score=43.17 Aligned_cols=219 Identities=10% Similarity=0.046 Sum_probs=111.4
Q ss_pred EEEEEe-cccEEEEEcCCCcee--ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC-cceEEEcCC----CCC
Q psy952 18 WLIFSN-KYYVRNMSLDATQYS--LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST-EKERVIRHD----SHG 89 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~--~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~i~~~~----~~~ 89 (573)
.|+++. ...|+.+++...+.. ....... .....++ ++.||+.. ..+.|+.+++..+ ..-...... +..
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~-~~~p~~~--~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKVAGEA-LSRPVVS--DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCC-CSCCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeCCCce-EcCCEEE--CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 455554 457888887633321 1111100 1111222 45666543 3456777776432 221111110 001
Q ss_pred cceeEEeecCCcEEEEeCCCCeEEEEEcC-CCceeEeccC----------CC-CcceEEEeCCCceEEEEecCCcCeEEE
Q psy952 90 LEGLAVDWVGRKLYWLDRHSKQLDVAELD-GTNRKTLKTA----------IQ-DPRGITLHPGIGYVYFSSWNLQAYIGK 157 (573)
Q Consensus 90 p~glavD~~~~~LY~td~~~~~I~~~~ld-g~~~~~l~~~----------~~-~P~~Iavdp~~g~LYwtd~~~~~~I~r 157 (573)
....+++ .+.||+.. ..+.|..+++. |..+-..... +. .....+++ .+.||+... ...|..
T Consensus 181 ~~~~~~~--~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~--~g~l~~ 253 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGG-DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGVVFALAY--NGNLTA 253 (376)
T ss_dssp CCCCEEE--TTEEEECC-TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTEEEEECT--TSCEEE
T ss_pred CCCcEEE--CCEEEEEc-CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCEEEEEec--CcEEEE
Confidence 1233443 56777753 35678888874 4433222110 00 00111233 578888763 457888
Q ss_pred EeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEecC
Q psy952 158 IGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDW 237 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd~ 237 (573)
+++......-.. .+..+.+++++ +++||++.. .+.|..++....................+++.++.||+.+.
T Consensus 254 ~d~~tG~~~w~~----~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~ 326 (376)
T 3q7m_A 254 LDLRSGQIMWKR----ELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDS 326 (376)
T ss_dssp EETTTCCEEEEE----CCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECT
T ss_pred EECCCCcEEeec----cCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeC
Confidence 877433222222 23345567766 899999875 56788888764443322221101223345567899998874
Q ss_pred CCCceEEEeccCCcceEE
Q psy952 238 NTKSINRADKFNGRDYRV 255 (573)
Q Consensus 238 ~~~~I~~~~~~~g~~~~~ 255 (573)
.+.|+.++..+|+.+..
T Consensus 327 -~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 327 -EGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp -TSEEEEEETTTCCEEEE
T ss_pred -CCeEEEEECCCCcEEEE
Confidence 46799999888875543
No 341
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.76 E-value=1.6 Score=42.50 Aligned_cols=202 Identities=11% Similarity=-0.000 Sum_probs=107.4
Q ss_pred CEEEEEe-cccEEEEEcCCCceeecccCCcceEEEEE--EcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCccee
Q psy952 17 PWLIFSN-KYYVRNMSLDATQYSLVHQDLLNVVAMDF--HYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGL 93 (573)
Q Consensus 17 ~~l~~s~-~~~I~~i~l~g~~~~~~~~~~~~~~~v~~--d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~gl 93 (573)
.+|+.+. .+.|+..++..............+..|+| .+ ++.++++-...+.|+.+++........+... ...+
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~ 174 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP---ERCY 174 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECS---SCEE
T ss_pred CEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecC---CCce
Confidence 3555444 46788888877655444445566889999 54 5555666666788999998765433333322 2345
Q ss_pred EEeecCCcEEEEeCCCCeEEEEEcCCCceeEec--c-CCCCcceEEEeCCCce----EEEEecCCcCeEEEEeccCCC--
Q psy952 94 AVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK--T-AIQDPRGITLHPGIGY----VYFSSWNLQAYIGKIGMDGSN-- 164 (573)
Q Consensus 94 avD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~--~-~~~~P~~Iavdp~~g~----LYwtd~~~~~~I~r~~ldG~~-- 164 (573)
++++....++.+.. .+.|.+.++......... . .......+++.+.... |+... ....|...+++...
T Consensus 175 ~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 175 CADVIYPMAVVATA-ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPA 251 (368)
T ss_dssp EEEEETTEEEEEEG-GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHH
T ss_pred EEEecCCeeEEEeC-CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCcc
Confidence 56666666666653 457778887654432221 1 1112233333322111 22222 23445555444331
Q ss_pred --cEEEEecCCC----------CCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee
Q psy952 165 --FTRILTHEDD----------IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF 228 (573)
Q Consensus 165 --~~~l~~~~~~----------l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~ 228 (573)
...+.. ... ......|++.+.+..|+.+. ..+.|...++........+... ......|++.
T Consensus 252 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s 324 (368)
T 3mmy_A 252 KDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDARTKLKTSEQL-DQPISACCFN 324 (368)
T ss_dssp HHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEEEEECCCC-SSCEEEEEEC
T ss_pred ccceeeee-eecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCcEEEEecCC-CCCceEEEEC
Confidence 112220 000 01357889988766666554 5677888888755443333322 2345677763
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.75 E-value=3.2 Score=45.94 Aligned_cols=224 Identities=8% Similarity=0.032 Sum_probs=121.5
Q ss_pred CceeeCCCCCCEEEEEecccEEEEEcCCCceeecc--c--CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEE
Q psy952 7 STCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVH--Q--DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERV 82 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~--~--~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i 82 (573)
.+|... ..+.+|-++....|.|++ |..+.... . ....+..|..|. .+.||+... ..|++++.........
T Consensus 24 V~~I~q-D~~G~lWigT~~GL~ryD--G~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigT~--~Gl~~yd~~~~~f~~~ 97 (758)
T 3ott_A 24 VSCFLQ-DSEGLIWIGSNKGLFSYD--GYSTQQHFTYGENNNTRIYCGVIID-NTYLYMGTD--NGILVYNYRADRYEQP 97 (758)
T ss_dssp EEEEEE-CTTSCEEEEESSCEEEEC--SSCEEECSCTTSTTSSCEEEEEEET-TTEEEEEET--TEEEEEETTTTEECCC
T ss_pred EEEEEE-CCCCCEEEEECCCccccC--CCceEEEEccCCCCCceEEEEEEcC-CCcEEEEeC--CCeEEEeCCCCEEECc
Confidence 345544 367888888888888875 33322111 1 123467787784 688888753 3588888754322110
Q ss_pred EcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec---cCC--CCcceEEEeCCCceEEEEecCCcCeEEE
Q psy952 83 IRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK---TAI--QDPRGITLHPGIGYVYFSSWNLQAYIGK 157 (573)
Q Consensus 83 ~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~---~~~--~~P~~Iavdp~~g~LYwtd~~~~~~I~r 157 (573)
.......+..|+. ..++||++... .|.+++......+.+. ..+ .....|+.|. .|.||+... ..|.+
T Consensus 98 ~~~~~~~i~~i~~--~~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~---~Gl~~ 169 (758)
T 3ott_A 98 ETDFPTDVRTMAL--QGDTLWLGALN--GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTK-DNQIYVGTY---NGLCR 169 (758)
T ss_dssp SCCCCSCEEEEEE--ETTEEEEEETT--EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECT-TCCEEEEET---TEEEE
T ss_pred ccCCCceEEEEEe--cCCcEEEEcCC--cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcC-CCCEEEEeC---CCHhh
Confidence 0001122344443 36778877543 6888887654444441 122 2356788887 677877652 35777
Q ss_pred EeccCCCcEEEEecCCC--CC--CCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeE
Q psy952 158 IGMDGSNFTRILTHEDD--IA--WPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHI 232 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~~~--l~--~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~l 232 (573)
.+......+.+.. ... +. ....|..|..++.||++.. +.|.+++......+.+..-. ......|..+ ++.|
T Consensus 170 ~~~~~~~~~~~~~-~~~~~~~~~~i~~i~~d~~~~~lWigt~--~Gl~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g~l 245 (758)
T 3ott_A 170 YIPSNGKFEGIPL-PVHSSQSNLFVNSLLEDTTRQCVWIGTE--GYLFQYFPSTGQIKQTEAFH-NNSIKSLALDGNGDL 245 (758)
T ss_dssp EETTTTEEEEECC-CCCTTCSSCCEEEEEEETTTTEEEEEEE--EEEEEEETTTTEEEEEEEEE-EEEEEEEEECTTCCE
T ss_pred CccCCCceEEecC-CCccccccceeEEEEEECCCCEEEEEEC--CCCeEEcCCCCeEEeccCCC-CCeEEEEEEcCCCCE
Confidence 7765443332220 111 11 1346777755566777652 46788887654433322110 1234566665 4556
Q ss_pred EEecCCCCceEEEeccCC
Q psy952 233 YWTDWNTKSINRADKFNG 250 (573)
Q Consensus 233 ywtd~~~~~I~~~~~~~g 250 (573)
++.- . +.|+++++.++
T Consensus 246 WigT-~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 246 LAGT-D-NGLYVYHNDTT 261 (758)
T ss_dssp EEEE-T-TEEEEECCTTS
T ss_pred EEEe-C-CceeEEecCCC
Confidence 6554 2 45777765444
No 343
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=95.74 E-value=0.0044 Score=70.54 Aligned_cols=30 Identities=47% Similarity=1.051 Sum_probs=29.0
Q ss_pred ceecCCCcccCCCcccCCCCCCCCCCCCCC
Q psy952 415 EFACRNGHCIPKLWVCDFDNDCGDDSDEPA 444 (573)
Q Consensus 415 ~f~C~~g~ci~~~~~Cd~~~dC~d~sDE~~ 444 (573)
.|+|.+|+||+..|+|||.+||+|+|||.+
T Consensus 122 ~F~C~~g~ci~~~~~c~g~~dC~d~sde~~ 151 (913)
T 3t5o_A 122 KFRCDSGRCIARKLECNGENDCGDNSDERD 151 (913)
T ss_dssp EEECTTSCEEEGGGSSSSSCCSSSSGGGTT
T ss_pred ccccCCCceEccceecCCcccCCCcccccc
Confidence 799999999999999999999999999976
No 344
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=95.68 E-value=0.04 Score=59.29 Aligned_cols=105 Identities=24% Similarity=0.588 Sum_probs=64.8
Q ss_pred CcccCCccccC-CCeeeec---ceee-CCcCCCCCCCCCCCCC-CCccccCCCCCccCC-----ccccCCCCcccc-CCC
Q psy952 307 STCSSSQFRCN-NGKCIDY---HLVC-NKESDCEDDSDEPLHC-NVDECAKVETNQCGH-----KCVDTLTGYYCE-CNT 374 (573)
Q Consensus 307 ~~C~~~~~~C~-~g~Ci~~---~~~c-d~~~~c~d~sde~~~c-~~~~C~~~~~~~C~~-----~C~~~~~~~~C~-C~~ 374 (573)
.+|... .|. ++.|+.. +|+| .+.++..- +.. .| ++++|.. .+..|.+ .|.+..++|.|. |+.
T Consensus 4 DeC~~n--PC~~gg~C~n~~~Gsy~C~~C~~GytG--dg~-~CeDiDEC~~-~p~~C~~gg~~~~CvNt~gsY~C~~C~~ 77 (634)
T 1yo8_A 4 DGCLSN--PCFPGAQCSSFPDGSWSCGFCPVGFLG--NGT-HCEDLDECAL-VPDICFSTSKVPRCVNTQPGFHCLPCPP 77 (634)
T ss_dssp CGGGGC--CSCTTCCEEECTTSCEEECCCCTTBCS--CSS-SCCBCCTTTT-SCCCSCCCSSSCCEEECSSSEEECCCCT
T ss_pred cccCCC--CCCCCCEEecCCCCCeECCcCCCccCC--CCC-CccccccccC-CCCcccCCccccceeeccCceecccCCC
Confidence 466533 364 4679875 3889 66665541 223 45 4788976 5556877 599999999998 999
Q ss_pred CceecC-----------CCcccccccccCCCCCCCCCCCCCCCCCCCC-CCCceecC
Q psy952 375 GYKLLE-----------DGKACTDIDECIEQPGVCSQYPAMCHNRPCD-KDTEFACR 419 (573)
Q Consensus 375 ~f~c~~-----------~~~c~~~~~~C~~~~~~~~~~~~~C~~~~C~-~~~~f~C~ 419 (573)
+|.-.. .++-|.++.+|...+..|.. ...|.+..-. .+ .|+|.
T Consensus 78 Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~-~~~Cvnt~~~~~G-sY~C~ 132 (634)
T 1yo8_A 78 RYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHK-HAECIYLGHFSDP-MYKCE 132 (634)
T ss_dssp TEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCT-TEEEEECCTTCSS-SEEEE
T ss_pred CcccCccccccccccccCCCcccccccccCCCccccc-Ccccccccccccc-ceeee
Confidence 997432 22345678889765444432 2345543200 13 57764
No 345
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.65 E-value=2.6 Score=46.19 Aligned_cols=55 Identities=13% Similarity=0.087 Sum_probs=28.9
Q ss_pred ceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeCC-ccceeEEEeeeCCeEEEe
Q psy952 179 NALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQ-KVPHVFALTLFEDHIYWT 235 (573)
Q Consensus 179 ~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~~-~~~~p~~ia~~~~~lywt 235 (573)
.+.++...++.||+. ...+.|..++.. |.....+.... ....|.... .++++|++
T Consensus 480 ~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~-~~G~~~v~ 536 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYM-VDGRQYVS 536 (677)
T ss_dssp CCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEE
T ss_pred cCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCCCcccCCEEEE-eCCEEEEE
Confidence 344455557788877 456788888865 44444333221 123343332 45565554
No 346
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.61 E-value=0.0046 Score=50.62 Aligned_cols=48 Identities=35% Similarity=0.843 Sum_probs=34.8
Q ss_pred CCCCccccCCCCCccCCccccCCCCccccCCCCceecCCCcccccccccC
Q psy952 343 HCNVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDECI 392 (573)
Q Consensus 343 ~c~~~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~ 392 (573)
.|++++|.. .+..|...|.+..++|.|.|+.+|....+. -|.++++|.
T Consensus 26 ~Cd~neC~~-~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~-~C~dideC~ 73 (107)
T 2w2n_E 26 AMGTNECLD-NNGGCSYVCNDLKIGYECLCPDGFQLVAQR-RCEDIDECQ 73 (107)
T ss_dssp CBSCCGGGT-GGGGCSSEEECCSBSCEEECCTTCEEETTT-EEEC-----
T ss_pred CCcCccCcC-CCCCCCCEeEeCCCCeEEECCCCccccCCC-ccccccccC
Confidence 577888976 556788899999999999999999986555 445889996
No 347
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.59 E-value=2 Score=42.30 Aligned_cols=195 Identities=9% Similarity=-0.019 Sum_probs=106.7
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc--eEEE-cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK--ERVI-RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR 122 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~i~-~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~ 122 (573)
.+..|+|.+.+..| .+-...+.|...++.+... ..++ ......+..|++.+.++.|+.+ ...+.|.+.+++....
T Consensus 18 ~v~~l~~sp~g~~l-as~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~-s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 18 RCWFLAWNPAGTLL-ASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA-SFDATTCIWKKNQDDF 95 (345)
T ss_dssp CEEEEEECTTSSCE-EEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEECCC-E
T ss_pred cEEEEEECCCCCEE-EEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE-ECCCcEEEEEccCCCe
Confidence 57789999865554 4445567788777765432 1222 2223567889998766555444 4566777777665432
Q ss_pred ---eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEE-EEecCCCCCCCceEEEeccCCeEEEEeCCCC
Q psy952 123 ---KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTR-ILTHEDDIAWPNALTLDYFTERLYWADAHLD 198 (573)
Q Consensus 123 ---~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~-l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~ 198 (573)
.++.........|++.|...+|.-.. ....|...+++...... +............+++.+.+..|..+. ..+
T Consensus 96 ~~~~~~~~h~~~v~~v~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~ 172 (345)
T 3fm0_A 96 ECVTTLEGHENEVKSVAWAPSGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS-YDD 172 (345)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTS
T ss_pred EEEEEccCCCCCceEEEEeCCCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCC
Confidence 22333445678999999655555444 24556655555433221 110022233446788887666555443 455
Q ss_pred eEEEEeCCCCcEEEE--EeCCccceeEEEeee-CCeEEEecCCCCceEEEe
Q psy952 199 YIASVDLDGKHKHIV--ISGQKVPHVFALTLF-EDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 199 ~I~~~~~dG~~~~~l--~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~~~~ 246 (573)
.|...+........+ +.+. .....+|++. .+.++.+-...+.|..-+
T Consensus 173 ~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 173 TVKLYREEEDDWVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp CEEEEEEETTEEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEecCCCEEEEEEecCC-CCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 666666554432221 2222 3456777774 344445544455554433
No 348
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.58 E-value=1.7 Score=41.60 Aligned_cols=198 Identities=7% Similarity=-0.031 Sum_probs=106.1
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc--ceEEEcCCCCCcceeEEeec-CCcEEEEeCCCCeEEEEEcCCCc
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE--KERVIRHDSHGLEGLAVDWV-GRKLYWLDRHSKQLDVAELDGTN 121 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~i~~~~~~~p~glavD~~-~~~LY~td~~~~~I~~~~ldg~~ 121 (573)
..+..++|++..+.|. +-...+.|+..++.+.. ....+...-..+..|++.+. .++++.+-+..+.|.+-++....
T Consensus 10 ~~V~~~~~s~~g~~la-s~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMA-TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECTTSSEEE-EEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECCCCCEEE-EEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 4577899997655554 44566778888886532 22223322345677777532 35666666677889988887542
Q ss_pred ---eeEeccCCCCcceEEEeCCC-ceEEEEecCCcCeEEEEeccCCC--cEEEEecCCCCCCCceEEEeccC--------
Q psy952 122 ---RKTLKTAIQDPRGITLHPGI-GYVYFSSWNLQAYIGKIGMDGSN--FTRILTHEDDIAWPNALTLDYFT-------- 187 (573)
Q Consensus 122 ---~~~l~~~~~~P~~Iavdp~~-g~LYwtd~~~~~~I~r~~ldG~~--~~~l~~~~~~l~~P~glaiD~~~-------- 187 (573)
..++.........|++.|.. +.++.+-. ....|...++.... ....+ ...-.....+++.+..
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s-~d~~v~~wd~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS-SDGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEEBCSSSCBCCEEE--ECCSSCEEEEEECCCC--------
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEE-CCCcEEEEEecCCCceeeeee--ecccCccceEeecCCcccccccCC
Confidence 12222334457889999852 44444432 34566666654321 11222 1222233566666532
Q ss_pred ----CeEEEEeCCCCeEEEEeCCCCc-EE-E--EEeCCccceeEEEeeeC----CeEEEecCCCCceEEEec
Q psy952 188 ----ERLYWADAHLDYIASVDLDGKH-KH-I--VISGQKVPHVFALTLFE----DHIYWTDWNTKSINRADK 247 (573)
Q Consensus 188 ----~~LYw~D~~~~~I~~~~~dG~~-~~-~--l~~~~~~~~p~~ia~~~----~~lywtd~~~~~I~~~~~ 247 (573)
++++++-...+.|...++.... .. . .+.+. .....+|++.. +.++.+-...+.|..-+.
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-CCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 3455555556666666665432 11 1 12221 23456777743 255556555566655443
No 349
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.52 E-value=1.4 Score=45.30 Aligned_cols=162 Identities=8% Similarity=-0.092 Sum_probs=92.4
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCcee
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRK 123 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~ 123 (573)
...+.+|+|++..+.++.+-...+.|+.+++............-..+..|++.+.++.|+... ..+.|.+.++.+....
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~ 227 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKK 227 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEE
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccc
Confidence 345889999998677777777788899999876532211211224688899988766676665 5678999999865555
Q ss_pred EeccCC--C-----CcceEEEeCCCceEEEEecCC-----cCeEEEEeccCCC---cEEEEecCCC------CCCCceEE
Q psy952 124 TLKTAI--Q-----DPRGITLHPGIGYVYFSSWNL-----QAYIGKIGMDGSN---FTRILTHEDD------IAWPNALT 182 (573)
Q Consensus 124 ~l~~~~--~-----~P~~Iavdp~~g~LYwtd~~~-----~~~I~r~~ldG~~---~~~l~~~~~~------l~~P~gla 182 (573)
.+.... . ...+|+.++...+|.....+. ...+....+.... ...+.. ... ..++..+.
T Consensus 228 ~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~ 306 (434)
T 2oit_A 228 VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVN-FMEPCYGSCTERQHHYY 306 (434)
T ss_dssp EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEE-CCCSSCCCCSSSCCCEE
T ss_pred cccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEe-cccCCCCCCCCcCccee
Confidence 443211 1 345666665333332222121 1234444444221 122221 111 22333444
Q ss_pred Ee--ccCCeEEEEeCCCCeEEEEeCCC
Q psy952 183 LD--YFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 183 iD--~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
+. ++-+.||++.+....|..+..++
T Consensus 307 ~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 307 LSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred eehhccCCEEEEecCCCCceeEEEecC
Confidence 44 45688888888777666665543
No 350
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.51 E-value=2.1 Score=42.09 Aligned_cols=179 Identities=15% Similarity=0.098 Sum_probs=100.2
Q ss_pred EEEEEe-cccEEEEEcCCCcee---eccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE--EEcCCCCCc
Q psy952 18 WLIFSN-KYYVRNMSLDATQYS---LVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER--VIRHDSHGL 90 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~---~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--i~~~~~~~p 90 (573)
+|+.+. ...|+..++.+.... .+.. ....+..|+|.+.++.|+.+. ..+.|...+++....+. .+......+
T Consensus 30 ~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~h~~~v 108 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS-FDATTCIWKKNQDDFECVTTLEGHENEV 108 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECCC-EEEEEEECCCSSCE
T ss_pred EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-CCCcEEEEEccCCCeEEEEEccCCCCCc
Confidence 444333 467888887665321 1212 334588999998766665554 45566666665543222 233333567
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCCCce----eEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR----KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT 166 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg~~~----~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~ 166 (573)
..|++.+.++ ++++-...+.|.+.++..... .++.........|+++|...+|..... ...|...++......
T Consensus 109 ~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 109 KSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYREEEDDWV 185 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET--TSCEEEEEEETTEEE
T ss_pred eEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC--CCcEEEEEecCCCEE
Confidence 8899987554 455555667888888865432 122234455789999997666655543 344554444433222
Q ss_pred EEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEE
Q psy952 167 RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIA 201 (573)
Q Consensus 167 ~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~ 201 (573)
.+......-.....|++++.+..|..+. ..+.|.
T Consensus 186 ~~~~~~~h~~~v~~l~~sp~g~~l~s~s-~D~~v~ 219 (345)
T 3fm0_A 186 CCATLEGHESTVWSLAFDPSGQRLASCS-DDRTVR 219 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEE
T ss_pred EEEEecCCCCceEEEEECCCCCEEEEEe-CCCeEE
Confidence 1111022334457899997766665544 344443
No 351
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.44 E-value=0.0085 Score=42.04 Aligned_cols=29 Identities=7% Similarity=-0.118 Sum_probs=25.7
Q ss_pred CcccccccccccCcc-ceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGST-TVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~-~~~C-Cp~~~~l~~d~~~ 305 (573)
++|+|+|+..+ . +|+| |+.||.|..|+++
T Consensus 7 ggC~~~C~n~~---ggs~~C~C~~Gy~L~~Dg~t 37 (53)
T 2bz6_L 7 GGCEQYCSDHT---GTKRSCRCHEGYSLLADGVS 37 (53)
T ss_dssp GGCSSEEEEET---TTEEEEECCTTEEECTTSSC
T ss_pred CCcCCEeEcCC---CCCEEeeCCCCCEECCCCCc
Confidence 68999999987 4 6999 9999999988876
No 352
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.42 E-value=0.006 Score=47.71 Aligned_cols=67 Identities=37% Similarity=0.907 Sum_probs=45.1
Q ss_pred CccccCCCCCccCC-ccccCCCCccccCCCCceecC-CCcccccccccCCCCCCCCCCCCCCCCCCCCCCCceecC
Q psy952 346 VDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLE-DGKACTDIDECIEQPGVCSQYPAMCHNRPCDKDTEFACR 419 (573)
Q Consensus 346 ~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~-~~~c~~~~~~C~~~~~~~~~~~~~C~~~~C~~~~~f~C~ 419 (573)
+++|.. .+..|.+ .|.+..++|.|.|+.+|.... .++.+.++++|...+..+. ...|.+. .+ .|+|.
T Consensus 3 ideC~~-~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~--~~~C~n~---~g-~y~C~ 71 (86)
T 1lmj_A 3 IDECRI-SPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR--GGVCHNT---EG-SYRCE 71 (86)
T ss_dssp CCTTTT-CSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT--TSEEEEE---TT-EEEEE
T ss_pred cccccC-CCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC--CCEeEcC---CC-CEEEE
Confidence 567766 4566877 899999999999999998753 2334568899976554332 1345543 34 66664
No 353
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.37 E-value=2.7 Score=42.51 Aligned_cols=230 Identities=10% Similarity=0.034 Sum_probs=132.3
Q ss_pred CceeeCCCCCCEEEEEe-cccEEEEEcCCCcee-ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce-EEE
Q psy952 7 STCKRRDSIKPWLIFSN-KYYVRNMSLDATQYS-LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE-RVI 83 (573)
Q Consensus 7 ~~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~-~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~i~ 83 (573)
.+|.+......+|+.+. ...|+..++...... ........+..++++ . .+..+-...+.|...+....... ..+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~-~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--S-YILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--C-CEEEEEeCCCceeEeeecccceeeEEe
Confidence 45665543334555544 467888888755432 222233446677776 2 34555556677877776653332 223
Q ss_pred cCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-----eEeccCCCCcceEEEeCCCceEEEEecC-CcCeEEE
Q psy952 84 RHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-----KTLKTAIQDPRGITLHPGIGYVYFSSWN-LQAYIGK 157 (573)
Q Consensus 84 ~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-----~~l~~~~~~P~~Iavdp~~g~LYwtd~~-~~~~I~r 157 (573)
......+.++.+.+.+..| .+-...+.|.+.++..... ............+++.|....++.+-.+ ....|..
T Consensus 227 ~~h~~~~~~~~~~~~g~~l-~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp ECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred cccccceeeeeecCCCCee-eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 3334567777777655444 4444567788877653321 1222334456889999988777766433 3456766
Q ss_pred EeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeC-CCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEe
Q psy952 158 IGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADA-HLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWT 235 (573)
Q Consensus 158 ~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~-~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywt 235 (573)
.++........+ ..-..+..+++.+..+.|+.+-. ..+.|...++........+.+. .....+|++. ++.+++|
T Consensus 306 wd~~t~~~~~~~---~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH-~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 306 WNVCSGACLSAV---DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH-TSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp EETTTTEEEEEE---ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSCEEE
T ss_pred EeCCccccceee---ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEE
Confidence 666544333333 22344567888888888887754 4678888888655443334432 3456778874 4455555
Q ss_pred cCCCCceEE
Q psy952 236 DWNTKSINR 244 (573)
Q Consensus 236 d~~~~~I~~ 244 (573)
-...+.|..
T Consensus 382 ~s~D~tvri 390 (420)
T 4gga_A 382 AAADETLRL 390 (420)
T ss_dssp EETTTEEEE
T ss_pred EecCCeEEE
Confidence 445555543
No 354
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.27 E-value=2.6 Score=41.68 Aligned_cols=229 Identities=10% Similarity=0.011 Sum_probs=124.9
Q ss_pred CCCceeeCCCCCCEEEEEecccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc
Q psy952 5 DESTCKRRDSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR 84 (573)
Q Consensus 5 dg~~C~~~~~~~~~l~~s~~~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~ 84 (573)
+..+|.+......+|+.+....++..+++....... .....+..+++.+..+.+.++....+.|...++........+.
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~ 98 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMS-QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK 98 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEE-EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeee-eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence 455666655444567767667777777765432221 1122355667777788887877777789988886543322222
Q ss_pred CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCC-c-eeEeccCCCCcce-EEEeCCCceEEEEecCCcCeEEEEecc
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGT-N-RKTLKTAIQDPRG-ITLHPGIGYVYFSSWNLQAYIGKIGMD 161 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~-~-~~~l~~~~~~P~~-Iavdp~~g~LYwtd~~~~~~I~r~~ld 161 (573)
.. ..+.+++++ .+.++++. .+.|.+.++... . ...+.. |.+ +++.+ .+|.++.....+.|...++.
T Consensus 99 ~~-~~v~~v~~~--~~~~~~~~--~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 99 VD-APVKDLFLS--REFIVVSY--GDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp CS-SCEEEEEEC--SSEEEEEE--TTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSCTTCEEEEECC
T ss_pred CC-CceEEEEEc--CCEEEEEE--cCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCcCcEEEEEECC
Confidence 22 355566654 45566553 467888888754 2 111111 333 33444 45555422234556666665
Q ss_pred CCC-----------------cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCe-EEEEeCCC-CcEEEEEeCCcccee
Q psy952 162 GSN-----------------FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDY-IASVDLDG-KHKHIVISGQKVPHV 222 (573)
Q Consensus 162 G~~-----------------~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~-I~~~~~dG-~~~~~l~~~~~~~~p 222 (573)
... ...+ ...-.....|++.+.+. +..+-...+. |...++.. .....+..+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~---~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v 243 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLI---KAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV 243 (355)
T ss_dssp C------------------CCEEE---CCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE
T ss_pred CCCccccccccccccccCcccEEE---EccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE
Confidence 422 2222 22333457899987554 4445455666 88888864 444444423113456
Q ss_pred EEEeee-CCeEEEecCCCCceEEEeccC
Q psy952 223 FALTLF-EDHIYWTDWNTKSINRADKFN 249 (573)
Q Consensus 223 ~~ia~~-~~~lywtd~~~~~I~~~~~~~ 249 (573)
.+|++. ++.++.+-...+.|..-+...
T Consensus 244 ~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 244 VDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 778874 345555545556666655433
No 355
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.17 E-value=2.4 Score=40.63 Aligned_cols=199 Identities=6% Similarity=-0.024 Sum_probs=109.0
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCc---eeecccCCcceEEEEEEcC-CCEEEEEECCCCeEEEEEcCCCc--ce
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQ---YSLVHQDLLNVVAMDFHYK-ENRFYFADVAAKTIYRSRVGSTE--KE 80 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~---~~~~~~~~~~~~~v~~d~~-~~~ly~~d~~~~~I~~~~~~g~~--~~ 80 (573)
++.+......+|+-+. ...|+..++.+.. ...+......+.+|+|.+. .+.++.+-...+.|...++.... ..
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~ 92 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI 92 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence 4444432233444443 4678888886432 1222223345778999653 35666676677889999987543 22
Q ss_pred EEEcCCCCCcceeEEeecC-CcEEEEeCCCCeEEEEEcCCCc---eeEeccCCCCcceEEEeCCC------------ceE
Q psy952 81 RVIRHDSHGLEGLAVDWVG-RKLYWLDRHSKQLDVAELDGTN---RKTLKTAIQDPRGITLHPGI------------GYV 144 (573)
Q Consensus 81 ~i~~~~~~~p~glavD~~~-~~LY~td~~~~~I~~~~ldg~~---~~~l~~~~~~P~~Iavdp~~------------g~L 144 (573)
..+......+..|++.+.. +.++.+-...+.|.+.++.... ...+.........+++.|.. +.+
T Consensus 93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCE
T ss_pred EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcce
Confidence 2232223467788887652 4555555567889888886432 12222344456778888742 334
Q ss_pred EEEecCCcCeEEEEeccCCCc-EEEE-ecCCCCCCCceEEEeccC--CeEEEEeCCCCeEEEEeCCC
Q psy952 145 YFSSWNLQAYIGKIGMDGSNF-TRIL-THEDDIAWPNALTLDYFT--ERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 145 Ywtd~~~~~~I~r~~ldG~~~-~~l~-~~~~~l~~P~glaiD~~~--~~LYw~D~~~~~I~~~~~dG 207 (573)
+++-. ....|..-++..... ..+. .....-.....|++.+.. +.++.+-...+.|...+++.
T Consensus 173 l~sgs-~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 173 FVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEEc-CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 44432 234455555443321 1111 002223345788888764 45666655667776666654
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.16 E-value=0.15 Score=54.62 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=71.2
Q ss_pred CCcceEEEEEEcCCCEEEEEECC---------------------CCeEEEEEcCCCc-------ceEEEc----------
Q psy952 43 DLLNVVAMDFHYKENRFYFADVA---------------------AKTIYRSRVGSTE-------KERVIR---------- 84 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~---------------------~~~I~~~~~~g~~-------~~~i~~---------- 84 (573)
.+.++.++++++.++.||++-.. .+.|+|+..++.. .+.++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 46679999999999999998553 2679999875432 112221
Q ss_pred -----------CCCCCcceeEEeecCCcEEEE-eCC-----------CCeEEEEEcCCCceeEecc--CCCCcceEEEeC
Q psy952 85 -----------HDSHGLEGLAVDWVGRKLYWL-DRH-----------SKQLDVAELDGTNRKTLKT--AIQDPRGITLHP 139 (573)
Q Consensus 85 -----------~~~~~p~glavD~~~~~LY~t-d~~-----------~~~I~~~~ldg~~~~~l~~--~~~~P~~Iavdp 139 (573)
..+..|.+|+||..+ +||+. |.. ++.+.+.+......+.++. .-....|+++.|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 125689999999855 57665 432 3467777766444444442 334588999999
Q ss_pred CCceEEEEe
Q psy952 140 GIGYVYFSS 148 (573)
Q Consensus 140 ~~g~LYwtd 148 (573)
....||+.-
T Consensus 541 Dg~tlfvni 549 (592)
T 3zwu_A 541 DQKTLFVGI 549 (592)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 888898875
No 357
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.15 E-value=0.012 Score=40.96 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=25.9
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
++|+|+|+..+ ++|+| |+.||.|..|+++
T Consensus 6 g~C~~~C~n~~---gs~~C~C~~Gy~L~~d~~t 35 (51)
T 1kig_L 6 GGCDQFCREER---SEVRCSCAHGYVLGDDSKS 35 (51)
T ss_dssp TSSSSCCCEET---TEECCCCCTTEEECTTSSC
T ss_pred CCcCCEeEcCC---CCeEEeCCCCcEECCCCCc
Confidence 68999999988 67999 9999999988775
No 358
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.13 E-value=0.011 Score=43.87 Aligned_cols=30 Identities=13% Similarity=-0.001 Sum_probs=26.1
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
++|+|+|+..+ | .+|+| |+.||.|..|+++
T Consensus 13 ggC~h~C~n~~-g-~s~~C~C~~Gy~L~~D~~t 43 (69)
T 1kli_L 13 GGCEQYCSDHT-G-TKRSCRCHEGYSLLADGVS 43 (69)
T ss_dssp GGCSSEEEEET-T-TEEEEECCTTEEECTTSSC
T ss_pred CCcCCEeEcCC-C-CCEEEeCCCCCeECCCCCc
Confidence 88999999988 2 26999 9999999998876
No 359
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=95.11 E-value=0.004 Score=56.64 Aligned_cols=104 Identities=19% Similarity=0.436 Sum_probs=66.3
Q ss_pred cccccccCccceee-eccceeecCCCCC---CCcccCC--ccccC-CCeeeec-------ceeeCCcCCCCCCCCCCCCC
Q psy952 279 AWLTAHRGSTTVAD-MIRSVYLGSGNKE---NSTCSSS--QFRCN-NGKCIDY-------HLVCNKESDCEDDSDEPLHC 344 (573)
Q Consensus 279 lCl~~~~~~~~~~C-Cp~~~~l~~d~~~---~~~C~~~--~~~C~-~g~Ci~~-------~~~cd~~~~c~d~sde~~~c 344 (573)
.|+... ..|+| |+.||.... +.. +++|... ...|. ++.|+.. +|+|...++..... ..|
T Consensus 17 ~C~~~~---g~~~C~C~~G~~g~~-~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~---~~C 89 (186)
T 1z1y_A 17 QLVQMS---NHFXCMCNEGLVHLS-ENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE---DTC 89 (186)
T ss_dssp EEEECS---SCEEEEECTTEEEEE-TTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET---TEE
T ss_pred EeECCC---CCeEeECCCCCccCC-CCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC---CCC
Confidence 566655 57999 999998862 222 6788754 45675 4678764 47886444432211 135
Q ss_pred CCccccCCCCCccCC--ccc----cCCCCccccCCCCceecC-CCccccc--ccccC
Q psy952 345 NVDECAKVETNQCGH--KCV----DTLTGYYCECNTGYKLLE-DGKACTD--IDECI 392 (573)
Q Consensus 345 ~~~~C~~~~~~~C~~--~C~----~~~~~~~C~C~~~f~c~~-~~~c~~~--~~~C~ 392 (573)
.+++|.. ..|.+ .|. +..+++.|.|+.+|.... +++-+.+ +++|.
T Consensus 90 ~~d~C~~---~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~ 143 (186)
T 1z1y_A 90 VLDVCQY---XNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ 143 (186)
T ss_dssp EEGGGTT---CCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC
T ss_pred CCCcCcC---CCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc
Confidence 5678865 35775 787 788899999999998743 2223333 35664
No 360
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.11 E-value=0.003 Score=52.85 Aligned_cols=97 Identities=16% Similarity=0.287 Sum_probs=59.7
Q ss_pred Cccccccccc-ccCccceee-eccceeecCCCCCCCcccC--CccccCCCeeeec-ceeeCCcCCCCCCCCCCCCC-CCc
Q psy952 274 GTTRHAWLTA-HRGSTTVAD-MIRSVYLGSGNKENSTCSS--SQFRCNNGKCIDY-HLVCNKESDCEDDSDEPLHC-NVD 347 (573)
Q Consensus 274 ~~Cs~lCl~~-~~~~~~~~C-Cp~~~~l~~d~~~~~~C~~--~~~~C~~g~Ci~~-~~~cd~~~~c~d~sde~~~c-~~~ 347 (573)
..|.+.|+.. . .+|+| |+.||.+.... ..+|.. ....|. +.|++. +|.|...++..... .. .| +++
T Consensus 10 ~pC~~~C~~~~~---g~y~C~C~~Gy~g~~~~--~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~~-g~-~C~did 81 (118)
T 1dx5_I 10 ANCEYQCQPLDQ---TSYLCVCAEGFAPIPHE--PHRCQMFCNQTACP-ADCDPNTQASCECPEGYILDD-GF-ICTDID 81 (118)
T ss_dssp CCCSSEEEECSS---SCEEEECCTTEEEETTE--EEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEET-TT-EEEECC
T ss_pred CCCCCCCCCCCC---CCEEeECCCCccccCCC--CCccccccCCCCCC-CcccCCCCeEeECCCCccCCC-CC-cccccc
Confidence 5677888887 5 67999 99999886431 223322 011122 344432 45664444432111 22 34 467
Q ss_pred cccCCCCCccCCccccCCCCccccCCCCceecC
Q psy952 348 ECAKVETNQCGHKCVDTLTGYYCECNTGYKLLE 380 (573)
Q Consensus 348 ~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~ 380 (573)
+|.. ...|...|.+..++|.|.|+.+|+...
T Consensus 82 eC~~--~~~C~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 82 ECEN--GGFCSGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp HHHH--CSSCSSEEEECSSSEEEEECSSSSCEE
T ss_pred ccCC--CCCCcCeEEeCCCCEEEECCCCCccCC
Confidence 8865 257855999999999999999997543
No 361
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.03 E-value=0.0069 Score=49.58 Aligned_cols=66 Identities=23% Similarity=0.527 Sum_probs=20.4
Q ss_pred CcccccccccccCccceee-eccceeecCCCCCCCcccCCccccCCCeeeecceeeCCcCCCCCCCCCCCCCCCccccCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNVDECAKV 352 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~~~~C~~~~~~C~~g~Ci~~~~~cd~~~~c~d~sde~~~c~~~~C~~~ 352 (573)
++|++.|+..+ .+|+| |+.||.+.. ++ .|. ++++|..
T Consensus 37 ~~C~~~C~n~~---g~y~C~C~~Gy~g~~-g~---------------~C~----------------------dideC~~- 74 (107)
T 2w2n_E 37 GGCSYVCNDLK---IGYECLCPDGFQLVA-QR---------------RCE----------------------DIDECQD- 74 (107)
T ss_dssp GGCSSEEECCS---BSCEEECCTTCEEET-TT---------------EEE----------------------C-------
T ss_pred CCCCCEeEeCC---CCeEEECCCCccccC-CC---------------ccc----------------------cccccCC-
Confidence 57888888776 67999 999998741 11 111 1344432
Q ss_pred CCCccCCccccCCCCccccCCCCceecCCC
Q psy952 353 ETNQCGHKCVDTLTGYYCECNTGYKLLEDG 382 (573)
Q Consensus 353 ~~~~C~~~C~~~~~~~~C~C~~~f~c~~~~ 382 (573)
...|...|.|..++|.|.|+.+|.....+
T Consensus 75 -~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~ 103 (107)
T 2w2n_E 75 -PDTCSQLCVNLEGGYKCQCEEGFQLDPHT 103 (107)
T ss_dssp ------------------------------
T ss_pred -CCCcCCeeecCCCCEEEECCCCceECCCC
Confidence 24566688889999999999999865543
No 362
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.02 E-value=5.2 Score=43.80 Aligned_cols=57 Identities=5% Similarity=-0.105 Sum_probs=32.3
Q ss_pred CeEEEEeCCCCcEEEEEeCCccceeE-EEeeeCCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 198 DYIASVDLDGKHKHIVISGQKVPHVF-ALTLFEDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 198 ~~I~~~~~dG~~~~~l~~~~~~~~p~-~ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
+.|..+|+......--.... .+... .++..++.||... ..+.|+.++..+|+.+-.+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~gt-~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYV-TIFNGGTLSTAGNLVFEGS-ADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEECCCCCeEeEccCC-CCccCccceECCCEEEEEC-CCCcEEEEECCCCccceee
Confidence 45777777543332222211 11111 3444567777774 5678999998888866443
No 363
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=94.94 E-value=6 Score=44.11 Aligned_cols=232 Identities=9% Similarity=0.059 Sum_probs=124.9
Q ss_pred ecccEEEEEcCCCceeecccC-------CcceEEEEEEcCC-CEEEEEECC-C----CeEEEEEcCCCcceEEEcC-CC-
Q psy952 23 NKYYVRNMSLDATQYSLVHQD-------LLNVVAMDFHYKE-NRFYFADVA-A----KTIYRSRVGSTEKERVIRH-DS- 87 (573)
Q Consensus 23 ~~~~I~~i~l~g~~~~~~~~~-------~~~~~~v~~d~~~-~~ly~~d~~-~----~~I~~~~~~g~~~~~i~~~-~~- 87 (573)
....|+|-.=.|...+.+... ...+.+|++|+.+ +.||++-.. . +.|++..-.|...+.+... .+
T Consensus 35 ~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~ 114 (789)
T 1sqj_A 35 DIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMG 114 (789)
T ss_dssp SSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCC
T ss_pred cCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccC
Confidence 345677666556655554332 2358899999854 567776432 2 5777765555555544321 10
Q ss_pred ------CCcceeEEeecC-CcEEEEeCCCCeEEEEEcCCCceeEeccC----C--CCcceEEEeCCC-ceEEEEecCCcC
Q psy952 88 ------HGLEGLAVDWVG-RKLYWLDRHSKQLDVAELDGTNRKTLKTA----I--QDPRGITLHPGI-GYVYFSSWNLQA 153 (573)
Q Consensus 88 ------~~p~glavD~~~-~~LY~td~~~~~I~~~~ldg~~~~~l~~~----~--~~P~~Iavdp~~-g~LYwtd~~~~~ 153 (573)
..+..|++++.. +.||... ..+.|++..-.|..=+.+... . .....|+++|.+ +.||+.... ..
T Consensus 115 ~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~ 192 (789)
T 1sqj_A 115 ANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA-PQ 192 (789)
T ss_dssp TTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS-TT
T ss_pred ccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC-CC
Confidence 123579999764 4555543 345677655555544443321 1 224578888865 478887632 15
Q ss_pred eEEEEeccCCCcEEEEecCCCC---------------CCCceEEEeccCCeEEEEe--------CCCCeEEEEeCCCCcE
Q psy952 154 YIGKIGMDGSNFTRILTHEDDI---------------AWPNALTLDYFTERLYWAD--------AHLDYIASVDLDGKHK 210 (573)
Q Consensus 154 ~I~r~~ldG~~~~~l~~~~~~l---------------~~P~glaiD~~~~~LYw~D--------~~~~~I~~~~~dG~~~ 210 (573)
.|++..=.|..=+.+....... ..|..|++++..++||.+- ...+.|++..-.|..=
T Consensus 193 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW 272 (789)
T 1sqj_A 193 GMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAW 272 (789)
T ss_dssp CEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCE
T ss_pred eEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCce
Confidence 6776543344433321101111 1237788887788999872 2456788877656544
Q ss_pred EEEEeCCcc----------c---eeEEEeee---CCeEEEecCC------CCceEEEeccCCcceEEEc
Q psy952 211 HIVISGQKV----------P---HVFALTLF---EDHIYWTDWN------TKSINRADKFNGRDYRVLR 257 (573)
Q Consensus 211 ~~l~~~~~~----------~---~p~~ia~~---~~~lywtd~~------~~~I~~~~~~~g~~~~~l~ 257 (573)
+.+...... . .-.+|++. .+.||++-.. ...|++.. ..|+.-+.+.
T Consensus 273 ~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~-DgG~tW~~~~ 340 (789)
T 1sqj_A 273 DDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLST-DAGATWKDVT 340 (789)
T ss_dssp EECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEES-STTSSEEEHH
T ss_pred EECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEec-CCCCCceeCc
Confidence 333221100 0 12466764 3567776432 15676653 4465555443
No 364
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=94.94 E-value=0.017 Score=40.84 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=25.8
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
++|+|+|+..+ ++|+| |+.||.|..|+++
T Consensus 9 ~~C~~~C~nt~---Gsy~C~C~~Gy~L~~d~~~ 38 (55)
T 2jkh_L 9 GDCDQFCHEEQ---NSVVCSCARGYTLADNGKA 38 (55)
T ss_dssp GGCSSEEEEET---TEEEEECCTTEEECTTSSC
T ss_pred CCcCcEeEcCC---CCeEEeCCCCCEECCCCCe
Confidence 67999999988 68999 9999999888776
No 365
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.84 E-value=5.2 Score=42.95 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=21.4
Q ss_pred EeeeCCeEEEecCCCCceEEEeccCCcceEE
Q psy952 225 LTLFEDHIYWTDWNTKSINRADKFNGRDYRV 255 (573)
Q Consensus 225 ia~~~~~lywtd~~~~~I~~~~~~~g~~~~~ 255 (573)
++..++.||+.. ..+.|+.++..+|+.+-.
T Consensus 480 ~~tagg~vf~gt-~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 480 MATAGDLVFYGT-LDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEEE
T ss_pred eEecCCEEEEEC-CCCeEEEEECCCCCEEEE
Confidence 555678888864 457788888888876533
No 366
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=94.78 E-value=0.037 Score=47.24 Aligned_cols=77 Identities=31% Similarity=0.775 Sum_probs=52.4
Q ss_pred CCcccCCccccC-CCeeeec--ceeeCCcCCCCCCCCCCCCC--CCccccCCCCCccCC--ccccCCCCccccCCCCcee
Q psy952 306 NSTCSSSQFRCN-NGKCIDY--HLVCNKESDCEDDSDEPLHC--NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYKL 378 (573)
Q Consensus 306 ~~~C~~~~~~C~-~g~Ci~~--~~~cd~~~~c~d~sde~~~c--~~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c 378 (573)
+++|......|. ++.|+.. +|+|...++.. .. .| ++++|.. ..|.+ .|.+..+++.|.|+.+|.
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~-~C~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~- 75 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GP-RCEIDVNECVS---NPCQNDATCLDQIGEFQCICMPGYE- 75 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----ST-TSCEECCTTTT---CCCCSSCEEEECSSCEEEECCTTEE-
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CC-cccccCccCCC---CCCCCCCEEeCCCCCceeeCCCCCc-
Confidence 567776556685 5789875 67886544443 22 34 3567754 45766 799999999999999997
Q ss_pred cCCCcccccccccCC
Q psy952 379 LEDGKACTDIDECIE 393 (573)
Q Consensus 379 ~~~~~c~~~~~~C~~ 393 (573)
+..|-.++++|..
T Consensus 76 --G~~C~~~~~~C~~ 88 (135)
T 2vj3_A 76 --GVHCEVNTDECAS 88 (135)
T ss_dssp --SSSSCEECCTTTT
T ss_pred --CCcceecCCcccC
Confidence 4446556777763
No 367
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.64 E-value=2.3 Score=42.01 Aligned_cols=95 Identities=7% Similarity=0.025 Sum_probs=57.3
Q ss_pred CCCCeEEEEEcCCCc---------------c-eEEEcCCCCCcceeEEeecCCcEEEEeCCCCe-EEEEEcC-CCceeEe
Q psy952 64 VAAKTIYRSRVGSTE---------------K-ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQ-LDVAELD-GTNRKTL 125 (573)
Q Consensus 64 ~~~~~I~~~~~~g~~---------------~-~~i~~~~~~~p~glavD~~~~~LY~td~~~~~-I~~~~ld-g~~~~~l 125 (573)
...+.|..+++.... . ...+......+..|++.+. +++..+-+..+. |.+.++. +....++
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 445667777776432 0 1223333457889999874 455566566777 9999987 4444445
Q ss_pred cc--CCCCcceEEEeCCCceEEEEecCCcCeEEEEecc
Q psy952 126 KT--AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD 161 (573)
Q Consensus 126 ~~--~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld 161 (573)
.. .......|+++|...+|..+. ....|...++.
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s--~d~~v~iw~~~ 270 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVS--DKWTLHVFEIF 270 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEE--TTCEEEEEESS
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEE--CCCEEEEEEcc
Confidence 42 455688999999665555544 24555555554
No 368
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.64 E-value=3.6 Score=40.17 Aligned_cols=140 Identities=7% Similarity=-0.031 Sum_probs=83.3
Q ss_pred CEEEEE-ecccEEEEEcCCCceeecc--cCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce-EEEcC-CCCCcc
Q psy952 17 PWLIFS-NKYYVRNMSLDATQYSLVH--QDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE-RVIRH-DSHGLE 91 (573)
Q Consensus 17 ~~l~~s-~~~~I~~i~l~g~~~~~~~--~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~i~~~-~~~~p~ 91 (573)
.+|+.+ ....|+..++......... .....+..++|++. +.++.+-...+.|..+++...... ..+.. ....+.
T Consensus 140 ~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (343)
T 3lrv_A 140 EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIK 218 (343)
T ss_dssp CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTT-SCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEE
T ss_pred CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEE
Confidence 355533 3568888998765543222 22234779999974 555666567788999998765443 23333 346788
Q ss_pred eeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCC---CCc---ceEEEeCCCceEEEEecCCcCeEEEEec
Q psy952 92 GLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAI---QDP---RGITLHPGIGYVYFSSWNLQAYIGKIGM 160 (573)
Q Consensus 92 glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~---~~P---~~Iavdp~~g~LYwtd~~~~~~I~r~~l 160 (573)
.|++.+.+..|..+. .+.|.+.++........+..+ ..+ ..++++|...+|..... ....|...++
T Consensus 219 ~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~-~d~~i~v~~~ 290 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN-ESNSLTIYKF 290 (343)
T ss_dssp EEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET-TTTEEEEEEE
T ss_pred EEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC-CCCcEEEEEE
Confidence 999988766666666 338999998754322111110 012 35999997666665442 1334444444
No 369
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.58 E-value=6.2 Score=43.58 Aligned_cols=184 Identities=9% Similarity=0.033 Sum_probs=102.2
Q ss_pred CCCEEEEEecccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc--CC--CCC
Q psy952 15 IKPWLIFSNKYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR--HD--SHG 89 (573)
Q Consensus 15 ~~~~l~~s~~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~--~~--~~~ 89 (573)
....|.++....|.+++.....+..... ....+..+.. ..+.||++... .|++++......+.+.. .+ ...
T Consensus 72 ~~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~--~~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~l~~~~ 147 (758)
T 3ott_A 72 DNTYLYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL--QGDTLWLGALN--GLYTYQLQSRKLTSFDTRRNGLPNNT 147 (758)
T ss_dssp TTTEEEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE--ETTEEEEEETT--EEEEEETTTCCEEEECHHHHCCSCSC
T ss_pred CCCcEEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe--cCCcEEEEcCC--cceeEeCCCCeEEEeccCCCCcCCCe
Confidence 3456777777778888876544432211 1123455543 36888887543 68899886544433311 11 234
Q ss_pred cceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-c---CC--CCcceEEEeCCCceEEEEecCCcCeEEEEeccCC
Q psy952 90 LEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-T---AI--QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS 163 (573)
Q Consensus 90 p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-~---~~--~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~ 163 (573)
+..|+.|. .++||+.-. +.|.+++......+.+. . .+ ...+.|..|...+.||+.. ...|.+.+....
T Consensus 148 i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt---~~Gl~~~~~~~~ 221 (758)
T 3ott_A 148 IYSIIRTK-DNQIYVGTY--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT---EGYLFQYFPSTG 221 (758)
T ss_dssp EEEEEECT-TCCEEEEET--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE---EEEEEEEETTTT
T ss_pred EEEEEEcC-CCCEEEEeC--CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE---CCCCeEEcCCCC
Confidence 66777774 677877653 35888887654433332 1 11 1256788887556666654 235777776543
Q ss_pred CcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcEEEE
Q psy952 164 NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIV 213 (573)
Q Consensus 164 ~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~~~l 213 (573)
....+.. -.-.....|+.| .++.||++-. +-|.+++......+.+
T Consensus 222 ~~~~~~~--l~~~~i~~i~~d-~~g~lWigT~--~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 222 QIKQTEA--FHNNSIKSLALD-GNGDLLAGTD--NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEEEEE--EEEEEEEEEEEC-TTCCEEEEET--TEEEEECCTTSCCEEE
T ss_pred eEEeccC--CCCCeEEEEEEc-CCCCEEEEeC--CceeEEecCCCcEEEE
Confidence 3222210 000123567777 5678888763 4577777765444333
No 370
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=94.30 E-value=0.02 Score=40.01 Aligned_cols=30 Identities=43% Similarity=1.062 Sum_probs=25.5
Q ss_pred CCccCCccccCCCCccccCCCCceecCCCc
Q psy952 354 TNQCGHKCVDTLTGYYCECNTGYKLLEDGK 383 (573)
Q Consensus 354 ~~~C~~~C~~~~~~~~C~C~~~f~c~~~~~ 383 (573)
...|.+.|.|..++|.|.|+.+|.+...++
T Consensus 19 ~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~ 48 (53)
T 1apq_A 19 QPQCQHLCHNYVGGYFCSCRPGYELQEDRH 48 (53)
T ss_dssp SCTTSSEEEEETTEEEEECSTTCEECTTSS
T ss_pred CCCCCCEeECCCCCeEEECCCCCeECCCCC
Confidence 367888999999999999999999876544
No 371
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=94.23 E-value=0.0097 Score=51.79 Aligned_cols=39 Identities=33% Similarity=0.844 Sum_probs=31.5
Q ss_pred CC-CCccccCCCCCccCC-ccccCCCCccccCCCCceecCCC
Q psy952 343 HC-NVDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLEDG 382 (573)
Q Consensus 343 ~c-~~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~~~ 382 (573)
.| ++++|.. .+..|.+ .|.|..++|.|.|+.+|.....+
T Consensus 103 ~C~dideC~~-~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~ 143 (147)
T 2w86_A 103 QCEDIDECEV-FPGVCKNGLCVNTRGSFKCQCPSGMTLDATG 143 (147)
T ss_dssp EEEECCHHHH-STTCSSSSEEEEETTEEEEECCTTCCBCTTS
T ss_pred ccCccccccC-CCCCCCCCEEECCCCCEEeeCCCCCccCCCC
Confidence 44 5788876 5567987 89999999999999999876644
No 372
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=94.13 E-value=0.065 Score=46.41 Aligned_cols=75 Identities=28% Similarity=0.662 Sum_probs=48.3
Q ss_pred CCcccCCccccCC-Ceeeec--ceeeCCcCCCCCCCCCCCCCC-CccccCCCCCccCCcc-ccCCCCccccCCCCceecC
Q psy952 306 NSTCSSSQFRCNN-GKCIDY--HLVCNKESDCEDDSDEPLHCN-VDECAKVETNQCGHKC-VDTLTGYYCECNTGYKLLE 380 (573)
Q Consensus 306 ~~~C~~~~~~C~~-g~Ci~~--~~~cd~~~~c~d~sde~~~c~-~~~C~~~~~~~C~~~C-~~~~~~~~C~C~~~f~c~~ 380 (573)
+++|... .|.+ +.|+.. +|.|...++.. .. .|. +++|.. .+..|.+.| .+..+++.|.|+.+|.+..
T Consensus 48 ideC~~~--pC~n~g~C~~~~~~y~C~C~~G~~----G~-~C~~~deC~~-~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~ 119 (146)
T 1x7a_L 48 GDQCEPN--PCLNGGLCKDDINSYECWCQVGFE----GK-NCELDATCNI-KNGRCKQFCKTGADSKVLCSCTTGYRLAP 119 (146)
T ss_dssp --CCSSC--SSCTTCEEEECSSCEEEECCSSEE----ST-TTCEECCTTS-GGGSCSSBCCCCSSSCCCCBCCTTEEECT
T ss_pred cCcCCCC--CCCCCCEeECCCCCEEEecCCCCc----CC-cCCCCccccC-CCCCCcCCCCCCCCCCEEeEcCCCcEeCC
Confidence 4566543 3643 678764 67775444332 22 342 467765 456788899 9999999999999999876
Q ss_pred CCcccccc
Q psy952 381 DGKACTDI 388 (573)
Q Consensus 381 ~~~c~~~~ 388 (573)
+++.|.++
T Consensus 120 dG~~C~~~ 127 (146)
T 1x7a_L 120 DQKSCKPA 127 (146)
T ss_dssp TSSSEEEC
T ss_pred CCCcCCCC
Confidence 55444443
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=94.08 E-value=0.25 Score=52.94 Aligned_cols=108 Identities=9% Similarity=0.027 Sum_probs=67.1
Q ss_pred CCCCcceeEEeecCCcEEEEeCC---------------------CCeEEEEEcCCCce-------eEec-----------
Q psy952 86 DSHGLEGLAVDWVGRKLYWLDRH---------------------SKQLDVAELDGTNR-------KTLK----------- 126 (573)
Q Consensus 86 ~~~~p~glavD~~~~~LY~td~~---------------------~~~I~~~~ldg~~~-------~~l~----------- 126 (573)
.+.+|+++++++.++.||++-+. .+.|+++.+++... ..++
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 36799999999999999998642 26788887653211 1111
Q ss_pred -----------cCCCCcceEEEeCCCceEEEEecCC-----------cCeEEEEeccCCCcEEEEecCCCCCCCceEEEe
Q psy952 127 -----------TAIQDPRGITLHPGIGYVYFSSWNL-----------QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLD 184 (573)
Q Consensus 127 -----------~~~~~P~~Iavdp~~g~LYwtd~~~-----------~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD 184 (573)
..+..|-.|+||| .|.||+.+-+. +..+..........+.|+. ...-....|+++.
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fs 539 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFS 539 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEEC
T ss_pred ccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeEC
Confidence 1255799999999 56677765332 2345555554333333331 2222334588888
Q ss_pred ccCCeEEEEeC
Q psy952 185 YFTERLYWADA 195 (573)
Q Consensus 185 ~~~~~LYw~D~ 195 (573)
++.+.||+.-.
T Consensus 540 pDg~tlfvniQ 550 (592)
T 3zwu_A 540 PDQKTLFVGIQ 550 (592)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 88888888643
No 374
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=94.05 E-value=3.4 Score=45.89 Aligned_cols=165 Identities=15% Similarity=0.119 Sum_probs=93.2
Q ss_pred CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEc-C----------CCCCcceeEEeecC-CcEEEEeC---
Q psy952 43 DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIR-H----------DSHGLEGLAVDWVG-RKLYWLDR--- 107 (573)
Q Consensus 43 ~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~-~----------~~~~p~glavD~~~-~~LY~td~--- 107 (573)
..+.+.+|++++.+..++|+-...+.|+|..-.|...+.+.. . ....+..|++|+.+ +.||.+-.
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 445789999999886555555556678887766655454432 1 22356789999854 67887543
Q ss_pred ---CCCeEEEEEcCCCceeEeccCC-------CCc--ceEEEeCCC-ceEEEEecCCcCeEEEEeccCCCcEEEEecCCC
Q psy952 108 ---HSKQLDVAELDGTNRKTLKTAI-------QDP--RGITLHPGI-GYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD 174 (573)
Q Consensus 108 ---~~~~I~~~~ldg~~~~~l~~~~-------~~P--~~Iavdp~~-g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~ 174 (573)
..+.|++..-.|..=+.+...+ ... ..|+|+|.+ +.||... ....|+|..=.|..=+.+......
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~--~~~~l~~S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS--RTQGLWRSTDRAQTWSRMNQLPDS 176 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC--SSSCEEEESSTTSSCEECTTSCCC
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe--CCCcEEEECCCCcCccccccCccc
Confidence 1356776655555433332111 111 369999864 6677664 235677765445443332200010
Q ss_pred C---CCCceEEEeccC-CeEEEEeCCCCeEEEEeCCCCc
Q psy952 175 I---AWPNALTLDYFT-ERLYWADAHLDYIASVDLDGKH 209 (573)
Q Consensus 175 l---~~P~glaiD~~~-~~LYw~D~~~~~I~~~~~dG~~ 209 (573)
. .....|++|+.+ ++||++-...+.|++..-.|..
T Consensus 177 ~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~t 215 (763)
T 3a0f_A 177 STYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWDGGAN 215 (763)
T ss_dssp SCTTTCEEEEEECSSSTTCEEEEESSTTCEEEESSSSSS
T ss_pred CCCccceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCC
Confidence 1 112356788754 5788886644356665433433
No 375
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.99 E-value=4.8 Score=39.09 Aligned_cols=193 Identities=9% Similarity=0.028 Sum_probs=99.2
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce--EEE-cC-CCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCC
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE--RVI-RH-DSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGT 120 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~i~-~~-~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~ 120 (573)
..+..+++++. ++.+-...+.|+..++...... .++ .. ....+..|++.+.++ +..+-...+.|.+.++...
T Consensus 15 ~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~ 90 (330)
T 2hes_X 15 EKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEES 90 (330)
T ss_dssp SCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC---
T ss_pred CceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccC
Confidence 34678888854 5555566778888888654222 223 22 234678899987554 4455555678888877432
Q ss_pred --------ceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc--CCCcEEEEecCCCCCCCceEEEeccCCeE
Q psy952 121 --------NRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD--GSNFTRILTHEDDIAWPNALTLDYFTERL 190 (573)
Q Consensus 121 --------~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld--G~~~~~l~~~~~~l~~P~glaiD~~~~~L 190 (573)
...++.........|+++|...+|.-.. ....|..-++. +...+.+......-.....|++.+.+..|
T Consensus 91 ~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 91 ADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp ----CCCEEEEEEC----CEEEEEECTTSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred cCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 1222333445578999999655554443 24556666653 22222221102223345688888765544
Q ss_pred EEEeCCCCeEEEEeCCCCcEEE--EEeCCccceeEEEeeeC---CeEEEecCCCCceEEE
Q psy952 191 YWADAHLDYIASVDLDGKHKHI--VISGQKVPHVFALTLFE---DHIYWTDWNTKSINRA 245 (573)
Q Consensus 191 Yw~D~~~~~I~~~~~dG~~~~~--l~~~~~~~~p~~ia~~~---~~lywtd~~~~~I~~~ 245 (573)
. +-...+.|...+......+. .+.+. ......+++.. +.++.+-...+.|..-
T Consensus 169 ~-s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 169 A-SSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp E-EEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred E-EEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 4 44445666555543332111 22222 23456666643 2344444444555433
No 376
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=93.98 E-value=0.025 Score=48.86 Aligned_cols=72 Identities=32% Similarity=0.899 Sum_probs=44.6
Q ss_pred CC-CCccccCCCCCccCC--ccccCCCCccccCCCCceecCCC--------cccccccccCCCCCCCCCCCCCCCCCCCC
Q psy952 343 HC-NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDG--------KACTDIDECIEQPGVCSQYPAMCHNRPCD 411 (573)
Q Consensus 343 ~c-~~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~--------~c~~~~~~C~~~~~~~~~~~~~C~~~~C~ 411 (573)
.| ++++|.......|.+ .|.+..++|.|.|+.+|...... +-+.++++|...+..+.. .+.|.+.
T Consensus 40 ~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~-~~~C~n~--- 115 (143)
T 2bou_A 40 TCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDS-STVCFNT--- 115 (143)
T ss_dssp CCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCT-TSEEEEC---
T ss_pred cCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCC-CCEEECC---
Confidence 45 578887622347875 89999999999999999876432 234577888654333322 2345443
Q ss_pred CCCceecC
Q psy952 412 KDTEFACR 419 (573)
Q Consensus 412 ~~~~f~C~ 419 (573)
.+ .|+|.
T Consensus 116 ~g-~y~C~ 122 (143)
T 2bou_A 116 VG-SYSCR 122 (143)
T ss_dssp SS-CEEEE
T ss_pred CC-CEEee
Confidence 33 56653
No 377
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=93.98 E-value=0.064 Score=53.01 Aligned_cols=79 Identities=35% Similarity=0.798 Sum_probs=54.0
Q ss_pred CcccCCccccC-CCeeeec--ceeeCCcCCCCCCCCCCCCC--CCccccCCCCCccCCccccCCCCccccCCCCceecCC
Q psy952 307 STCSSSQFRCN-NGKCIDY--HLVCNKESDCEDDSDEPLHC--NVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLED 381 (573)
Q Consensus 307 ~~C~~~~~~C~-~g~Ci~~--~~~cd~~~~c~d~sde~~~c--~~~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~~ 381 (573)
+.|...+ |. ++.|+.. .|.|.+.++. ... .| ++++|.......|.+.|.+..+++.|.|+.+|....+
T Consensus 6 ~~C~~~p--C~~~g~C~~~~~~~~C~C~~g~----~g~-~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~ 78 (317)
T 3h5c_B 6 SPCISQP--CLHNGSCQDSIWGYTCTCSPGY----EGS-NCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGED 78 (317)
T ss_dssp CCTTSCC--CTTTCCCCCCSSSCCCCCSSSC----CSS-SSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTT
T ss_pred CcCCCCC--CCCCCEeECCCCCeEEECCCCC----cCC-ccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccc
Confidence 4565543 54 3567654 5778654444 333 45 4788975224789999999999999999999998766
Q ss_pred CcccccccccC
Q psy952 382 GKACTDIDECI 392 (573)
Q Consensus 382 ~~c~~~~~~C~ 392 (573)
.+.|.+..+|.
T Consensus 79 ~~~C~~~~~c~ 89 (317)
T 3h5c_B 79 HKQCVPHDQCA 89 (317)
T ss_dssp SSCCEECSSCC
T ss_pred ccccccccccc
Confidence 65666666663
No 378
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=93.78 E-value=0.031 Score=40.06 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=25.6
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
++|+|+|+..+ + ++|.| |+.||.|..|+++
T Consensus 7 ggC~~~C~n~~-~-gs~~C~C~~Gy~L~~D~~t 37 (59)
T 2wph_E 7 GRCEQFCKNSA-D-NKVVCSCTEGYRLAENQKS 37 (59)
T ss_dssp GGCSSEEEECS-T-TCEEEECCTTEEECTTSSC
T ss_pred CCcCCEeEeCC-C-CCEEeeCCCCcEECCCCCc
Confidence 78999999877 1 37999 9999999988775
No 379
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=93.77 E-value=0.028 Score=40.31 Aligned_cols=35 Identities=29% Similarity=0.809 Sum_probs=29.2
Q ss_pred CCCccCCccccCC-CCccccCCCCceecCCCccccc
Q psy952 353 ETNQCGHKCVDTL-TGYYCECNTGYKLLEDGKACTD 387 (573)
Q Consensus 353 ~~~~C~~~C~~~~-~~~~C~C~~~f~c~~~~~c~~~ 387 (573)
.+..|.+.|.+.. +++.|.|+.+|.+..+++.|.+
T Consensus 5 ~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 5 KNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp GGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 4567888999998 5999999999999887766655
No 380
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.68 E-value=5.3 Score=38.46 Aligned_cols=200 Identities=9% Similarity=0.053 Sum_probs=107.3
Q ss_pred ccEEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEECC---------CCeEEEEEcCCCcceEEEcCCCCCcc-e
Q psy952 25 YYVRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADVA---------AKTIYRSRVGSTEKERVIRHDSHGLE-G 92 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~~---------~~~I~~~~~~g~~~~~i~~~~~~~p~-g 92 (573)
..+.++++.......+.. ....-.+++.. +++||+.--. ...++++++.....+.+.. +..|+ +
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~p~~r~~ 114 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP--MSVPRNR 114 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC--CSSCCBT
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC--CCcCccc
Confidence 468888887665544311 11111233333 7889987432 2468888887655444322 22221 1
Q ss_pred eEEeecCCcEEEEeC-----CCCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecCC----cCeEEEEec
Q psy952 93 LAVDWVGRKLYWLDR-----HSKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWNL----QAYIGKIGM 160 (573)
Q Consensus 93 lavD~~~~~LY~td~-----~~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~~----~~~I~r~~l 160 (573)
.+.-..+++||+.-. ....++++++....-+.+. .+..| .+.++. ++.||+.-... ...+++.++
T Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 115 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-PMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYP 191 (308)
T ss_dssp CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECC-CCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeC
Confidence 122224789999742 1357888988765544443 22222 233443 67899874211 346788877
Q ss_pred cCCCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeE
Q psy952 161 DGSNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHI 232 (573)
Q Consensus 161 dG~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~l 232 (573)
....-+.+ ..+..|. ++++ .+++||+.-.. ...|+++++....=+.+........-.++++.+++|
T Consensus 192 ~~~~W~~~----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 265 (308)
T 1zgk_A 192 ERNEWRMI----TAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRI 265 (308)
T ss_dssp TTTEEEEC----CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEE
T ss_pred CCCeEeeC----CCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEE
Confidence 64432222 2333332 3333 37899998543 357899998765444332211011224666778899
Q ss_pred EEecC
Q psy952 233 YWTDW 237 (573)
Q Consensus 233 ywtd~ 237 (573)
|+.-.
T Consensus 266 ~v~GG 270 (308)
T 1zgk_A 266 YVLGG 270 (308)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 88743
No 381
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=93.62 E-value=0.087 Score=40.53 Aligned_cols=44 Identities=43% Similarity=1.010 Sum_probs=33.4
Q ss_pred CccccCCCCCccCC-ccccCCCCccccCCCCceecCCCcccccccccCC
Q psy952 346 VDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLEDGKACTDIDECIE 393 (573)
Q Consensus 346 ~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~~ 393 (573)
+++|.. ...|.+ .|.+..++|.|.|+.+|.. .+. -+.++++|..
T Consensus 5 ideC~~--~~~C~~g~C~n~~g~y~C~C~~Gy~~-~g~-~C~dideC~~ 49 (82)
T 1emn_A 5 MDECKE--PDVCKHGQCINTDGSYRCECPFGYIL-AGN-ECVDTDECSV 49 (82)
T ss_dssp CCSSSS--TTSCSSSEECCCSSCCCEECCTTEEE-ETT-EEEECCGGGT
T ss_pred cccCCC--CCCcCCCEEEecCCCEEEECCCCeEC-CCC-ccCCcccccC
Confidence 566753 356777 8999999999999999987 343 4478889863
No 382
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=93.08 E-value=0.041 Score=42.40 Aligned_cols=70 Identities=26% Similarity=0.667 Sum_probs=43.3
Q ss_pred CCcccCCccccCCCeeeec--ceeeCCcCCCCCCCCCCCCC-CCccccCCCCCccCC-ccccCCCCccccCCCCceecCC
Q psy952 306 NSTCSSSQFRCNNGKCIDY--HLVCNKESDCEDDSDEPLHC-NVDECAKVETNQCGH-KCVDTLTGYYCECNTGYKLLED 381 (573)
Q Consensus 306 ~~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~sde~~~c-~~~~C~~~~~~~C~~-~C~~~~~~~~C~C~~~f~c~~~ 381 (573)
+++|.. ...|.++.|+.. +|+|...++... +.. .| ++++|.. ...|.+ .|.+..++|.|.|+.+|.....
T Consensus 5 ideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~-~C~dideC~~--~~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 5 MDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGN-ECVDTDECSV--GNPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp CCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETT-EEEECCGGGT--CCTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred cccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCC-ccCCcccccC--CCCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 345554 334656677654 566654443321 122 33 3677863 246776 8999999999999999976543
No 383
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=92.96 E-value=7.3 Score=43.37 Aligned_cols=161 Identities=15% Similarity=0.143 Sum_probs=90.9
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC------CCCCcceeEEeecC-CcEEEEeCC-C----CeE
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH------DSHGLEGLAVDWVG-RKLYWLDRH-S----KQL 112 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~------~~~~p~glavD~~~-~~LY~td~~-~----~~I 112 (573)
..+.+|++++.+..++|+-...+.|+|..-.|...+.+... .......|++|+.. +.||++-.. . +.|
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEE
Confidence 56889999987644444444456788877666555544321 12357889999743 568876532 2 567
Q ss_pred EEEEcCCCceeEeccCCC---------CcceEEEeCCCc-eEEEEecCCcCeEEEEeccCCCcEEEEecCCC--C--CCC
Q psy952 113 DVAELDGTNRKTLKTAIQ---------DPRGITLHPGIG-YVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD--I--AWP 178 (573)
Q Consensus 113 ~~~~ldg~~~~~l~~~~~---------~P~~Iavdp~~g-~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~--l--~~P 178 (573)
++..-.|..=+.+...+. ....|+++|.+. .||... ....|+|..=.|..=+.+.. ... . ...
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~--~~~gl~~S~DgG~TW~~~~~-~~~~~~~~~~~ 171 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT--RTEGIWKSSDRAKTWTNVTS-IPDAFTNGIGY 171 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC--SSSCEEEESSTTSSCEEETT-SCCCCSTTTCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe--ccCCEEEECCCCcccCCCcc-CccccCCCCCe
Confidence 776655655444322111 235799998754 555543 24567776544554333320 010 0 112
Q ss_pred ceEEEeccC-CeEEEEeCCCCeEEEEeCCCC
Q psy952 179 NALTLDYFT-ERLYWADAHLDYIASVDLDGK 208 (573)
Q Consensus 179 ~glaiD~~~-~~LYw~D~~~~~I~~~~~dG~ 208 (573)
..|++|+.+ +.||++-.....|++..-.|.
T Consensus 172 ~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~ 202 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATAPQGMYVTHDGGV 202 (789)
T ss_dssp EEEEECTTSTTCEEEEESSTTCEEEESSTTS
T ss_pred EEEEECCCCCCEEEEEEcCCCeEEEEcCCCc
Confidence 467778754 578887654356666443343
No 384
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.93 E-value=7 Score=41.57 Aligned_cols=219 Identities=7% Similarity=-0.024 Sum_probs=117.1
Q ss_pred CCCceeeCCCCCCEEEEEec--ccEEEEEcCCCceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEE
Q psy952 5 DESTCKRRDSIKPWLIFSNK--YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERV 82 (573)
Q Consensus 5 dg~~C~~~~~~~~~l~~s~~--~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i 82 (573)
+|....+.. +..-++.+.. ..|+ + +.....+......+..|+|.|.+ .+..+++.......+
T Consensus 16 ~~v~sv~~S-pDG~~iASas~D~TV~--d--~~~~~~l~gh~~~v~~V~FsPdg-----------~~~~~~~~~~~~~~~ 79 (588)
T 2j04_A 16 DWKNNLTWA-RDGTLYLTTFPDISIG--Q--PKYAKDINCNSKNLFHVKEFPLE-----------FENKLDFELAQQNGL 79 (588)
T ss_dssp SSSCCEEEC-TTSCEEEECSSSEEEE--E--ECCCSCCSSBGGGTEEEEEECCC-----------CCCTTTTSCCCSSCS
T ss_pred ccEEEEEEC-CCCCEEEEEcCCceee--c--ccccceecCCCccEEEEEECCCC-----------CcceEEEEeCCCceE
Confidence 566666654 5555555543 3343 3 22212222334557888998755 111122221111111
Q ss_pred Ec-CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCC-----CCcceEEEeCCCceEEEEecCCcCeEE
Q psy952 83 IR-HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAI-----QDPRGITLHPGIGYVYFSSWNLQAYIG 156 (573)
Q Consensus 83 ~~-~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~-----~~P~~Iavdp~~g~LYwtd~~~~~~I~ 156 (573)
+. .....+.++++.+.+..|-.+. ..+.|.+.+..+ ....+..- ...++++++|...+|+.+. ..+.|.
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s-~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs--~DGtVk 154 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLS-NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGN--EDGELQ 154 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEE-TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEE--TTSEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEe-CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEc--CCCEEE
Confidence 11 2235678888888766666554 456777777544 11112211 1367899999988888887 356677
Q ss_pred EEeccCCCc--------EEEEe-cCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCCCcE----EEEEeCCccceeE
Q psy952 157 KIGMDGSNF--------TRILT-HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHK----HIVISGQKVPHVF 223 (573)
Q Consensus 157 r~~ldG~~~--------~~l~~-~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG~~~----~~l~~~~~~~~p~ 223 (573)
.-++.+... .++-. ......+...+++.+.+ +.+-...+.|...++++... +++..+. -....
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h-~~~V~ 230 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNAS-RRKIT 230 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCC-SSCCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccc-cCcEE
Confidence 777766532 22220 01123466788888654 45556677888888887663 2332222 23455
Q ss_pred EEeeeCCeEEEecCCCCceEEEeccCC
Q psy952 224 ALTLFEDHIYWTDWNTKSINRADKFNG 250 (573)
Q Consensus 224 ~ia~~~~~lywtd~~~~~I~~~~~~~g 250 (573)
+|++.+..|..+- .++|..-+..++
T Consensus 231 svaFsg~~LASa~--~~tIkLWd~~~~ 255 (588)
T 2j04_A 231 DLKIVDYKVVLTC--PGYVHKIDLKNY 255 (588)
T ss_dssp CEEEETTEEEEEC--SSEEEEEETTTT
T ss_pred EEEEECCEEEEEe--CCeEEEEECCCC
Confidence 6666544555443 356666654433
No 385
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.76 E-value=11 Score=40.87 Aligned_cols=16 Identities=31% Similarity=0.750 Sum_probs=13.3
Q ss_pred cceEEEeCCCceEEEE
Q psy952 132 PRGITLHPGIGYVYFS 147 (573)
Q Consensus 132 P~~Iavdp~~g~LYwt 147 (573)
-.++|+||.++.+|+.
T Consensus 383 w~~~a~dp~~g~~yv~ 398 (668)
T 1kv9_A 383 WHSMSFNPGTGLVYIP 398 (668)
T ss_dssp SSCCEEETTTTEEEEE
T ss_pred CCcceECCCCCEEEEe
Confidence 4458999999999985
No 386
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=92.61 E-value=0.063 Score=44.29 Aligned_cols=36 Identities=31% Similarity=0.689 Sum_probs=28.5
Q ss_pred ccccCCCCCccCCccccCCCCccccCCCCceecCCCc
Q psy952 347 DECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGK 383 (573)
Q Consensus 347 ~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~~~~ 383 (573)
++|.. .+..|.+.|.+..++|.|.|+.+|.....++
T Consensus 55 ~~C~~-~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~ 90 (114)
T 1aut_L 55 LNCSL-DNGGCTHYCLEEVGWRRCSCAPGYKLGDDLL 90 (114)
T ss_dssp SSSSS-GGGGCSSEEEECSSSEEEECCTTEEECTTSS
T ss_pred CcCcC-CCCCCCCEeECCCCCEEeECCCCeeECCCCC
Confidence 35655 4567888999999999999999999866543
No 387
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.39 E-value=8.1 Score=37.14 Aligned_cols=189 Identities=6% Similarity=-0.039 Sum_probs=99.4
Q ss_pred EEEEEe-cccEEEEEcCCCce---eecccCCcceEEEEEEcC-CCEEEEEECCCCeEEEEEcCCCcceE--EEcCCCCCc
Q psy952 18 WLIFSN-KYYVRNMSLDATQY---SLVHQDLLNVVAMDFHYK-ENRFYFADVAAKTIYRSRVGSTEKER--VIRHDSHGL 90 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~---~~~~~~~~~~~~v~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~--i~~~~~~~p 90 (573)
+|+-+. ...|+..++..... ..+......+.+|+|.+. .+.++++-...+.|...++.....+. .+......+
T Consensus 27 ~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V 106 (316)
T 3bg1_A 27 RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSV 106 (316)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCC
T ss_pred EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCce
Confidence 444433 45788788764422 112223345788999643 35566666667788888886543222 222233567
Q ss_pred ceeEEeecC-CcEEEEeCCCCeEEEEEcCCCceeEe---c-cCCCCcceEEEeCCC----------------ceEEEEec
Q psy952 91 EGLAVDWVG-RKLYWLDRHSKQLDVAELDGTNRKTL---K-TAIQDPRGITLHPGI----------------GYVYFSSW 149 (573)
Q Consensus 91 ~glavD~~~-~~LY~td~~~~~I~~~~ldg~~~~~l---~-~~~~~P~~Iavdp~~----------------g~LYwtd~ 149 (573)
..|++.+.. +.++.+-...+.|.+.++.+.....+ . ........|++.|.. +.++.+-
T Consensus 107 ~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg- 185 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG- 185 (316)
T ss_dssp CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECC-
T ss_pred EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEe-
Confidence 888888753 55666766778888888765422111 1 222234566666641 2333333
Q ss_pred CCcCeEEEEeccCCCc-EEEEecCCCCCCCceEEEeccC---CeEEEEeCCCCeEEEEeCCC
Q psy952 150 NLQAYIGKIGMDGSNF-TRILTHEDDIAWPNALTLDYFT---ERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 150 ~~~~~I~r~~ldG~~~-~~l~~~~~~l~~P~glaiD~~~---~~LYw~D~~~~~I~~~~~dG 207 (573)
+....|..-++..... +.+......-.....+++.+.. +.++.+-...++|...+++.
T Consensus 186 s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 186 GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 2233333333332221 1222101222334677777654 24555555667777777654
No 388
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=92.38 E-value=6.5 Score=43.43 Aligned_cols=208 Identities=14% Similarity=0.135 Sum_probs=110.1
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcC-C-----CCCcceeEEeec-CCcEEEEeCC--------CC
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRH-D-----SHGLEGLAVDWV-GRKLYWLDRH--------SK 110 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~-~-----~~~p~glavD~~-~~~LY~td~~--------~~ 110 (573)
.+.+|++++.+..++|+-...+.|+|..-.|...+.+... + ...+..|++|+. .+.||++-.. ..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 6889999987644444445556799988666655554321 1 134678999984 4688887532 24
Q ss_pred eEEEEEcCCCceeEeccCCC---------CcceEEEeCCC-ceEEEEecCCcCeEEEEeccCCCcEEEEecCCC-C--CC
Q psy952 111 QLDVAELDGTNRKTLKTAIQ---------DPRGITLHPGI-GYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD-I--AW 177 (573)
Q Consensus 111 ~I~~~~ldg~~~~~l~~~~~---------~P~~Iavdp~~-g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~-l--~~ 177 (573)
.|++..-.|..-+.+..... ....|++||.+ +.||.... ....|+|..=.|..=+.+...... + ..
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g~gl~~S~DgG~tW~~~~~~~~~~~~~~~ 182 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CGNGLWRSTDYGVTWSKVESFPNPGTYIYD 182 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TTCCEEEESSTTSSCEECTTCCCCCCCBSC
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cCCcEEEeCCCCcceecccCCCCCcccccC
Confidence 57665555554333321111 12689999975 56777642 114677665445443322100000 0 01
Q ss_pred C-----------ceEEEeccC-------CeEEEEeCCC-CeEEEEeCCCCcEEEEEeCCc-cceeEEEeee-CCeEEEec
Q psy952 178 P-----------NALTLDYFT-------ERLYWADAHL-DYIASVDLDGKHKHIVISGQK-VPHVFALTLF-EDHIYWTD 236 (573)
Q Consensus 178 P-----------~glaiD~~~-------~~LYw~D~~~-~~I~~~~~dG~~~~~l~~~~~-~~~p~~ia~~-~~~lywtd 236 (573)
| ..|++|+.. .+||++-... ..|++. .||...-..+.+.. -..+.-+++. .+.||++-
T Consensus 183 p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~ 261 (737)
T 2cn3_A 183 PNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITY 261 (737)
T ss_dssp TTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEE
T ss_pred cccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCCCCceEECCCCCCcccceEEEECCCCeEEEEe
Confidence 1 237787654 4899986443 246665 55544322222210 1123334443 66777652
Q ss_pred C---------CCCceEEEeccCCcceEEE
Q psy952 237 W---------NTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 237 ~---------~~~~I~~~~~~~g~~~~~l 256 (573)
. ..+.|++.+ ..|...+.+
T Consensus 262 ~d~~g~y~~~~~g~v~~s~-d~G~tW~~i 289 (737)
T 2cn3_A 262 GDTCGPYDGNGKGQVWKFN-TRTGEWIDI 289 (737)
T ss_dssp ESSCCSSCCSCCEEEEEEE-TTTCCEEEC
T ss_pred cCCCCccccccCceEEEEe-CCCCCEEEc
Confidence 1 345677765 344444433
No 389
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=92.31 E-value=16 Score=40.26 Aligned_cols=227 Identities=15% Similarity=0.050 Sum_probs=122.6
Q ss_pred cccEEEEEcCCCceeecccC-------CcceEEEEEEcC-CCEEEEEECC--------CCeEEEEEcCCCcceEEEcCC-
Q psy952 24 KYYVRNMSLDATQYSLVHQD-------LLNVVAMDFHYK-ENRFYFADVA--------AKTIYRSRVGSTEKERVIRHD- 86 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~~~~~~-------~~~~~~v~~d~~-~~~ly~~d~~--------~~~I~~~~~~g~~~~~i~~~~- 86 (573)
...|+|-.-.|...+.+... ...+.+|++|+. .+.||++-.. ...|+|..=.|...+.+....
T Consensus 44 ~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~ 123 (737)
T 2cn3_A 44 IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFK 123 (737)
T ss_dssp SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSC
T ss_pred CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcc
Confidence 56788777667666554332 234789999984 4788887532 346777654455555443211
Q ss_pred C-------CCcceeEEeecC-CcEEEEeCCCCeEEEEEcCCCceeEecc--C--C-------------CCcceEEEeCCC
Q psy952 87 S-------HGLEGLAVDWVG-RKLYWLDRHSKQLDVAELDGTNRKTLKT--A--I-------------QDPRGITLHPGI 141 (573)
Q Consensus 87 ~-------~~p~glavD~~~-~~LY~td~~~~~I~~~~ldg~~~~~l~~--~--~-------------~~P~~Iavdp~~ 141 (573)
+ .....|++|+.. +.||........|++..-.|..-+.+.. . + .....|++||..
T Consensus 124 ~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~ 203 (737)
T 2cn3_A 124 MGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSS 203 (737)
T ss_dssp CCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGG
T ss_pred cCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCC
Confidence 1 123689999865 5677664222457765544544333321 0 0 012348888854
Q ss_pred -------ceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCC---CCceEEEeccCCeEEEEeC---------CCCeEEE
Q psy952 142 -------GYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIA---WPNALTLDYFTERLYWADA---------HLDYIAS 202 (573)
Q Consensus 142 -------g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~---~P~glaiD~~~~~LYw~D~---------~~~~I~~ 202 (573)
+.||++.......|+|..=.|..=+. + ..+. .|.-+++++ .+.||++-. ..+.|++
T Consensus 204 ~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~-~---~~~p~~~~~~~~~~~~-~~~l~~~~~d~~g~y~~~~~g~v~~ 278 (737)
T 2cn3_A 204 STPGNPTKTIYVGVADKNESIYRSTDGGVTWKA-V---PGQPKGLLPHHGVLAS-NGMLYITYGDTCGPYDGNGKGQVWK 278 (737)
T ss_dssp SCTTSCCSCEEEEESCSSCCEEEESSTTSCCEE-C---TTCCCSSEEEEEEECT-TSEEEEEEESSCCSSCCSCCEEEEE
T ss_pred cccCCCCCEEEEEecCCCccEEEEcCCCCceEE-C---CCCCCcccceEEEECC-CCeEEEEecCCCCccccccCceEEE
Confidence 37888764333457776433443222 2 1221 223456665 778887631 3457888
Q ss_pred EeCCCCcEEEEEeCCcc--cee---EEEeee---CCeEEEecCC----CCceEEEeccCCcceEEE
Q psy952 203 VDLDGKHKHIVISGQKV--PHV---FALTLF---EDHIYWTDWN----TKSINRADKFNGRDYRVL 256 (573)
Q Consensus 203 ~~~dG~~~~~l~~~~~~--~~p---~~ia~~---~~~lywtd~~----~~~I~~~~~~~g~~~~~l 256 (573)
.+-.|..-+.+...... ..+ .+|++. .+.||+.... ...|++. ...|+.-+.+
T Consensus 279 s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~S-~DgG~tW~~~ 343 (737)
T 2cn3_A 279 FNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFRS-TDGGATWKNI 343 (737)
T ss_dssp EETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEEEE-SSTTSSCEES
T ss_pred EeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEEEe-CCCCccccch
Confidence 88766655544322101 112 246663 4678887543 2456654 3455555544
No 390
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=92.23 E-value=0.11 Score=44.60 Aligned_cols=88 Identities=22% Similarity=0.514 Sum_probs=53.3
Q ss_pred cccccccCccceee-eccceeecCCCC------------CCCcccCCccccC-CCeeee---------cceeeCCcCCCC
Q psy952 279 AWLTAHRGSTTVAD-MIRSVYLGSGNK------------ENSTCSSSQFRCN-NGKCID---------YHLVCNKESDCE 335 (573)
Q Consensus 279 lCl~~~~~~~~~~C-Cp~~~~l~~d~~------------~~~~C~~~~~~C~-~g~Ci~---------~~~~cd~~~~c~ 335 (573)
.|+... +...|+| |+.+|....-.. ....|... .|. ++.|+. ..|+|...+
T Consensus 13 ~C~~~~-~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~--~C~~~g~C~~~~~~~~~~~~~~~C~C~~--- 86 (143)
T 4d90_A 13 ICLPGL-ADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPN--PCHNGGTCEISEAYRGDTFIGYVCKCPR--- 86 (143)
T ss_dssp EEEC------CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSC--CCCTTCEEEECCCEETTEECCEEEECCT---
T ss_pred EeeCCC-CCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCC--CCCCCCEecCCCccccCCCCCeEeECcC---
Confidence 555433 2246899 999997433111 12345432 353 467872 367785444
Q ss_pred CCCCCCCCC--CCccccCCCCCccCC--ccccCCCCccccCCCCce
Q psy952 336 DDSDEPLHC--NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYK 377 (573)
Q Consensus 336 d~sde~~~c--~~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~ 377 (573)
+-... .| ++++|.. ..|.+ .|.+..+++.|.|+.+|.
T Consensus 87 -G~~G~-~C~~~i~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 87 -GFNGI-HCQHNINECEV---EPCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp -TEEST-TSCEECCTTTT---CCSCTTCEEEEETTEEEEECCTTCB
T ss_pred -CCcCC-CcccCCCcCCC---CCCCCCCEeECCCCCeEeECCCCCc
Confidence 33333 55 4678864 46776 799999999999999986
No 391
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.14 E-value=14 Score=39.37 Aligned_cols=76 Identities=13% Similarity=0.079 Sum_probs=45.0
Q ss_pred ceEEEeccCCeEEEEeC--------------------------------CCCeEEEEeCC-CCcEEEEEeCCccceeEEE
Q psy952 179 NALTLDYFTERLYWADA--------------------------------HLDYIASVDLD-GKHKHIVISGQKVPHVFAL 225 (573)
Q Consensus 179 ~glaiD~~~~~LYw~D~--------------------------------~~~~I~~~~~d-G~~~~~l~~~~~~~~p~~i 225 (573)
.++++|+..+.||+... ..+.|..+|+. |..+-.+.... ....-.+
T Consensus 415 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~ 493 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVL 493 (582)
T ss_dssp SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCE
T ss_pred CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccce
Confidence 36889988888888642 13456667764 33322222221 1111224
Q ss_pred eeeCCeEEEecCCCCceEEEeccCCcceEEE
Q psy952 226 TLFEDHIYWTDWNTKSINRADKFNGRDYRVL 256 (573)
Q Consensus 226 a~~~~~lywtd~~~~~I~~~~~~~g~~~~~l 256 (573)
+..++.||+.. ..+.|+.++..+|+.+-..
T Consensus 494 ~tagglvf~g~-~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 494 ATAGNLVFTGT-GDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp EETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEC-CCCcEEEEECCCCCEEEEe
Confidence 45678888875 4578888898888765433
No 392
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=91.84 E-value=0.19 Score=43.13 Aligned_cols=74 Identities=34% Similarity=0.764 Sum_probs=48.3
Q ss_pred CCcccCCccccCC-Ceeeec--ceeeCCcCCCCCCCCCCCCCCC--ccc---cCCCCCccCCccccCCC-CccccCCCCc
Q psy952 306 NSTCSSSQFRCNN-GKCIDY--HLVCNKESDCEDDSDEPLHCNV--DEC---AKVETNQCGHKCVDTLT-GYYCECNTGY 376 (573)
Q Consensus 306 ~~~C~~~~~~C~~-g~Ci~~--~~~cd~~~~c~d~sde~~~c~~--~~C---~~~~~~~C~~~C~~~~~-~~~C~C~~~f 376 (573)
+++|... .|.+ +.|+.. +|.|...++. ... .|.. .+| .. .+..|.+.|.+..+ +|.|.|+.+|
T Consensus 47 id~C~~~--pC~n~g~C~~~~g~y~C~C~~G~----~G~-~C~~~~~~c~~c~~-~~~~C~~~C~~~~g~~y~C~C~~Gy 118 (142)
T 2c4f_L 47 GDQCASS--PCQNGGSCKDQLQSYICFCLPAF----EGR-NCETHKDDQLICVN-ENGGCEQYCSDHTGTKRSCRCHEGY 118 (142)
T ss_dssp CCGGGGC--CCCTTCEEEEETTEEEEECCTTE----EST-TSCEEGGGCCSTTT-GGGGCSSEEECCTTSCCEEECCTTE
T ss_pred cCcCcCC--CcCCCCEEeCCCCCEEeeCCCCc----cCC-ccccCccccccccC-CCCCccCEeECCCCCCEEEECCCCc
Confidence 5667643 3754 689875 7888544443 233 4532 343 22 34667778999998 9999999999
Q ss_pred eecCCCccccc
Q psy952 377 KLLEDGKACTD 387 (573)
Q Consensus 377 ~c~~~~~c~~~ 387 (573)
.+..+++.|.+
T Consensus 119 ~l~~dG~~C~~ 129 (142)
T 2c4f_L 119 SLLADGVSCTP 129 (142)
T ss_dssp EECTTSSCEEE
T ss_pred eECCCCCCCCC
Confidence 98765544444
No 393
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.04 E-value=11 Score=35.96 Aligned_cols=213 Identities=11% Similarity=0.044 Sum_probs=114.2
Q ss_pred ccEEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEEC----CCCeEEEEEcCCCcceEEEcCCCCCcceeEEeec
Q psy952 25 YYVRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADV----AAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWV 98 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~----~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~ 98 (573)
+.+.++++.......+.. ....-.++++ .+++||+.-- ....++++++.....+.+......+ .+.+.-..
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~ 100 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-DSLAACAA 100 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC-BSCEEEEE
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc-cceeEEEE
Confidence 578888887765544321 1111223333 3788998853 2367899998776555443222111 11222234
Q ss_pred CCcEEEEeC------CCCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecC----C----cCeEEEEecc
Q psy952 99 GRKLYWLDR------HSKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWN----L----QAYIGKIGMD 161 (573)
Q Consensus 99 ~~~LY~td~------~~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~----~----~~~I~r~~ld 161 (573)
+++||+.-. ....++++++....-+.+.. +..| .++++. ++.||+.-.. . ...+++.++.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS-MLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC-CcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCC
Confidence 789999743 23578999987665444432 2222 233332 6789987521 1 3467888776
Q ss_pred CCCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEE
Q psy952 162 GSNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIY 233 (573)
Q Consensus 162 G~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~ly 233 (573)
...-+.+ ..+..|. ++++ .+++||+.-.. .+.|+++++....=+.+........-.++++.+++||
T Consensus 178 ~~~W~~~----~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 251 (306)
T 3ii7_A 178 TETWTEL----CPMIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVY 251 (306)
T ss_dssp TTEEEEE----CCCSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEE
T ss_pred CCeEEEC----CCccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEE
Confidence 5433332 2233332 3333 37899998332 3568888887654333322110112245666788999
Q ss_pred EecCC-----CCceEEEeccC
Q psy952 234 WTDWN-----TKSINRADKFN 249 (573)
Q Consensus 234 wtd~~-----~~~I~~~~~~~ 249 (573)
+.-.. ...|++.+..+
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTT
T ss_pred EEeCcCCCeeeeeEEEEcCCC
Confidence 87542 23455555433
No 394
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.96 E-value=11 Score=35.81 Aligned_cols=200 Identities=14% Similarity=0.159 Sum_probs=108.6
Q ss_pred ccEEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEECC-----CCeEEEEEcCCCc---ceEEEcCCCCC-ccee
Q psy952 25 YYVRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADVA-----AKTIYRSRVGSTE---KERVIRHDSHG-LEGL 93 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~---~~~i~~~~~~~-p~gl 93 (573)
+.+.++++.......+.. ....-.+++. .+++||+.--. ...++++++.... .+.+......+ -.++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 467888887665443321 1111223333 36889987432 2468999987665 55443222111 1123
Q ss_pred EEeecCCcEEEEeCC-----CCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecC----CcCeEEEEecc
Q psy952 94 AVDWVGRKLYWLDRH-----SKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWN----LQAYIGKIGMD 161 (573)
Q Consensus 94 avD~~~~~LY~td~~-----~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~----~~~~I~r~~ld 161 (573)
++ .+++||+.-.. .+.++++++....-+.+.. +..| .++++. ++.||+.-.. ....+++.++.
T Consensus 109 ~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~ 183 (301)
T 2vpj_A 109 TT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD-MQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPH 183 (301)
T ss_dssp EE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE-CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred EE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCC-CCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCC
Confidence 33 47899998531 3578999987655444432 1111 233333 5789987421 13468888876
Q ss_pred CCCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEE
Q psy952 162 GSNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIY 233 (573)
Q Consensus 162 G~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~ly 233 (573)
...-+.+ ..+..|. ++++ .+++||+.-.. .+.|+.+++....-+.+........-.++++.+++||
T Consensus 184 ~~~W~~~----~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 257 (301)
T 2vpj_A 184 TGHWTNV----TPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLY 257 (301)
T ss_dssp TTEEEEE----CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred CCcEEeC----CCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEE
Confidence 5433333 2233332 3333 37899998543 4578899887655444432110112235666788898
Q ss_pred EecC
Q psy952 234 WTDW 237 (573)
Q Consensus 234 wtd~ 237 (573)
+.-.
T Consensus 258 v~GG 261 (301)
T 2vpj_A 258 AIAG 261 (301)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8743
No 395
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=90.86 E-value=0.067 Score=48.63 Aligned_cols=73 Identities=32% Similarity=0.789 Sum_probs=31.4
Q ss_pred CCcccCCccccCC-Ceeeec--ceeeCCcCCCCCCCCCCCCCC--C-ccccCCCCCccCCccccCCCCccccCCCCceec
Q psy952 306 NSTCSSSQFRCNN-GKCIDY--HLVCNKESDCEDDSDEPLHCN--V-DECAKVETNQCGHKCVDTLTGYYCECNTGYKLL 379 (573)
Q Consensus 306 ~~~C~~~~~~C~~-g~Ci~~--~~~cd~~~~c~d~sde~~~c~--~-~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~ 379 (573)
++.|... .|.+ +.|+.. +|.|.+.++.. .. .|. + ++|.. .+..|.+.|.+..++|.|.|+.+|.+.
T Consensus 42 ideC~~~--pC~ngg~C~n~~g~y~C~C~~Gf~----G~-~Ce~~i~deC~~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~ 113 (195)
T 1nfu_B 42 GDQCETS--PCQNQGKCKDGLGEYTCTCLEGFE----GK-NCELFTRKLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLA 113 (195)
T ss_dssp ----------------------------------------------CCGGGT-GGGGCSSEEEEETTEEEEECCTTEEEC
T ss_pred CcccCCC--CCCCCCEeECCCCCeeEeCCCCce----ec-cccccccccccC-CCCCCCCEeECCCCCeEEECCCCceeC
Confidence 4566643 3643 578764 67886544443 33 564 3 67876 567798899999999999999999987
Q ss_pred CCCcccc
Q psy952 380 EDGKACT 386 (573)
Q Consensus 380 ~~~~c~~ 386 (573)
.+++-|.
T Consensus 114 ~dG~~C~ 120 (195)
T 1nfu_B 114 DNGKACI 120 (195)
T ss_dssp TTSSCEE
T ss_pred CCCCccc
Confidence 6554443
No 396
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.80 E-value=14 Score=36.76 Aligned_cols=179 Identities=9% Similarity=-0.118 Sum_probs=89.0
Q ss_pred cccEEEEEcCCC-ceeecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceE-EEc-----------------
Q psy952 24 KYYVRNMSLDAT-QYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKER-VIR----------------- 84 (573)
Q Consensus 24 ~~~I~~i~l~g~-~~~~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-i~~----------------- 84 (573)
.+.|+..++... ....+......+.+|+|.+.+..++++-...+.|...++....... +..
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 567888887543 3333334445678999999877777777778889888876532110 000
Q ss_pred -------CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eEec------------------cCCCCcceEEEe
Q psy952 85 -------HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KTLK------------------TAIQDPRGITLH 138 (573)
Q Consensus 85 -------~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~l~------------------~~~~~P~~Iavd 138 (573)
........+++....++..++-...+.|.+.++..... ..+. .......+....
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEc
Confidence 00123334444433444445555566676666543221 1111 011112333444
Q ss_pred CCCceEEEEecCCcCeEEEEeccC-CCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 139 PGIGYVYFSSWNLQAYIGKIGMDG-SNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 139 p~~g~LYwtd~~~~~~I~r~~ldG-~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
|..+.+|.+-.+....|...++.. .....+. ..-.....|++.+++..|-.+. .+.|..+++.|
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~---~~~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDSNSIPI---QLGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTCCEEEE---ECSSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcEEEEec---CCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 444555555434456666666553 3333333 1112346788887666665543 33444444443
No 397
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=90.32 E-value=0.089 Score=44.80 Aligned_cols=73 Identities=32% Similarity=0.792 Sum_probs=30.8
Q ss_pred CCcccCCccccCC-Ceeeec--ceeeCCcCCCCCCCCCCCCCC--C-ccccCCCCCccCCccccCCCCccccCCCCceec
Q psy952 306 NSTCSSSQFRCNN-GKCIDY--HLVCNKESDCEDDSDEPLHCN--V-DECAKVETNQCGHKCVDTLTGYYCECNTGYKLL 379 (573)
Q Consensus 306 ~~~C~~~~~~C~~-g~Ci~~--~~~cd~~~~c~d~sde~~~c~--~-~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~ 379 (573)
++.|...+ |.+ +.|+.. +|.|...++.. .. .|. + ++|.. .+..|.+.|.+..+++.|.|+.+|.+.
T Consensus 42 ~d~C~~~p--C~n~g~C~~~~~~y~C~C~~G~~----G~-~C~~~i~d~C~~-~~~~C~~~C~~~~g~y~C~C~~Gy~l~ 113 (134)
T 2vh0_B 42 GDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GK-NCELFTRKLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLA 113 (134)
T ss_dssp ----------------------------------------------CCGGGT-GGGGCSSEEEEETTEEEEECCTTEEEC
T ss_pred cCcCCCCC--CCCcCCcccCCCCEEeeCCCCcc----CC-ccccCCCCcccc-CCCCCCCEeECCCCCEEEECCCCcEEC
Confidence 44565432 543 567654 67775444332 33 453 3 56866 556788899999999999999999987
Q ss_pred CCCcccc
Q psy952 380 EDGKACT 386 (573)
Q Consensus 380 ~~~~c~~ 386 (573)
.+++.|.
T Consensus 114 ~~g~~C~ 120 (134)
T 2vh0_B 114 DNGKACI 120 (134)
T ss_dssp TTSSCEE
T ss_pred CCCCccC
Confidence 6554443
No 398
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=90.04 E-value=25 Score=38.34 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=14.0
Q ss_pred cceEEEeCCCceEEEEe
Q psy952 132 PRGITLHPGIGYVYFSS 148 (573)
Q Consensus 132 P~~Iavdp~~g~LYwtd 148 (573)
-.++|+||.++.||+..
T Consensus 391 w~~~a~dp~~~~~yv~~ 407 (689)
T 1yiq_A 391 WQPMSYNPDTGLVYIPA 407 (689)
T ss_dssp SSCCEEETTTTEEEEEE
T ss_pred CCcceECCCCCEEEEec
Confidence 34699999999999863
No 399
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=89.91 E-value=17 Score=36.21 Aligned_cols=96 Identities=8% Similarity=-0.117 Sum_probs=61.5
Q ss_pred cccEEEEEcCCCcee--ec---ccC-CcceEEEEEEc-------CCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCc
Q psy952 24 KYYVRNMSLDATQYS--LV---HQD-LLNVVAMDFHY-------KENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGL 90 (573)
Q Consensus 24 ~~~I~~i~l~g~~~~--~~---~~~-~~~~~~v~~d~-------~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p 90 (573)
.+.|+..++...... .+ ..+ ...+.+|+|.+ .++++..+-...+.|+..++........+...-..+
T Consensus 110 d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v 189 (393)
T 4gq1_A 110 DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPG 189 (393)
T ss_dssp TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCE
T ss_pred CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCc
Confidence 466777777654321 11 122 34478999975 356788887788889888875443322222223467
Q ss_pred ceeEEeecCCcEEEEeCCCCeEEEEEcCC
Q psy952 91 EGLAVDWVGRKLYWLDRHSKQLDVAELDG 119 (573)
Q Consensus 91 ~glavD~~~~~LY~td~~~~~I~~~~ldg 119 (573)
..+++.+.+.+++.+-...+.|.+.++..
T Consensus 190 ~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 190 ISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 78888876666777766778898888754
No 400
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=89.51 E-value=0.26 Score=47.67 Aligned_cols=46 Identities=39% Similarity=0.881 Sum_probs=35.9
Q ss_pred CccccCCCCCccCCccccCCCCccccCCCCceecCCCccccccccc
Q psy952 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391 (573)
Q Consensus 346 ~~~C~~~~~~~C~~~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C 391 (573)
++||....+..|.+.|.+..+++.|+|..+|++..+.+.|...++|
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c 47 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 47 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTT
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccccccc
Confidence 4677762278999999999999999999999998766655555544
No 401
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.39 E-value=11 Score=39.60 Aligned_cols=182 Identities=7% Similarity=-0.014 Sum_probs=101.7
Q ss_pred EEEEEe-cccEEEEEcCCCcee------------ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCC-cceEEE
Q psy952 18 WLIFSN-KYYVRNMSLDATQYS------------LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGST-EKERVI 83 (573)
Q Consensus 18 ~l~~s~-~~~I~~i~l~g~~~~------------~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~i~ 83 (573)
+|+-+. ...|+..++...... .+......+.+|+|.+. +. .++-...+.|...++... .....+
T Consensus 227 ~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~-lasgs~DgtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 227 CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT-VVCGFKNGFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE-EEEEETTSEEEEEETTBCSSCSEEE
T ss_pred eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce-EEEEeCCCEEEEEECCCCCCceEEe
Confidence 444333 467888887643210 11112245778999753 44 555567789999998743 332233
Q ss_pred cCCCCCcceeEEee-cCC-cEEEEeCCCCeEEEEEcCCC-ceeEeccCC--CCcceEEEeCCCceEEEEecCCcCeEEEE
Q psy952 84 RHDSHGLEGLAVDW-VGR-KLYWLDRHSKQLDVAELDGT-NRKTLKTAI--QDPRGITLHPGIGYVYFSSWNLQAYIGKI 158 (573)
Q Consensus 84 ~~~~~~p~glavD~-~~~-~LY~td~~~~~I~~~~ldg~-~~~~l~~~~--~~P~~Iavdp~~g~LYwtd~~~~~~I~r~ 158 (573)
...-..+.+|++.+ ..+ +++.+-+..+.|.+.++... ...++.... .....|+++|.. ..+.+-. ....|...
T Consensus 305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~-~d~tv~lw 382 (524)
T 2j04_B 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSD-GASSLRAV 382 (524)
T ss_dssp ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT-TEEEEEC-SSSEEEEE
T ss_pred ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc-CeEEEeC-CCCcEEEE
Confidence 33335677774332 233 78888888889999888543 223333222 235789999954 4455432 24456555
Q ss_pred eccCCC-cEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCCC
Q psy952 159 GMDGSN-FTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 207 (573)
Q Consensus 159 ~ldG~~-~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~dG 207 (573)
++.... ...+. ........|++.+.+..| .+-...+.|...++.+
T Consensus 383 d~~~~~~~~~l~---gH~~~V~sva~Sp~g~~l-~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 383 PSRAAFAVHPLV---SRETTITAIGVSRLHPMV-LAGSADGSLIITNAAR 428 (524)
T ss_dssp ETTCTTCCEEEE---ECSSCEEEEECCSSCCBC-EEEETTTEEECCBSCS
T ss_pred ECcccccceeee---cCCCceEEEEeCCCCCeE-EEEECCCEEEEEechH
Confidence 554332 34444 223345788888655444 4444566666666543
No 402
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.27 E-value=16 Score=35.02 Aligned_cols=117 Identities=8% Similarity=0.004 Sum_probs=67.9
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce--EEEcCCCCCcceeEEeec-CCcEEEEeCCCCeEEEEEcCCCc
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE--RVIRHDSHGLEGLAVDWV-GRKLYWLDRHSKQLDVAELDGTN 121 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~i~~~~~~~p~glavD~~-~~~LY~td~~~~~I~~~~ldg~~ 121 (573)
..+..|+|++..+.| .+-...+.|...++...... ..+......+..|++.+. .++++.+-+..+.|.+-++....
T Consensus 14 ~~V~~v~~s~~g~~l-asgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRL-ATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp CCEEEEEECGGGCEE-EEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CeEEEeeEcCCCCEE-EEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 346789999755544 45456677888887643321 122222356777877532 34555666667888888886532
Q ss_pred ---eeEeccCCCCcceEEEeCCC-ceEEEEecCCcCeEEEEeccCC
Q psy952 122 ---RKTLKTAIQDPRGITLHPGI-GYVYFSSWNLQAYIGKIGMDGS 163 (573)
Q Consensus 122 ---~~~l~~~~~~P~~Iavdp~~-g~LYwtd~~~~~~I~r~~ldG~ 163 (573)
..++.........|+++|.. +.++.+- +....|...++...
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasg-s~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACG-SSDGAISLLTYTGE 137 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEE-CSSSCEEEEEECSS
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEE-cCCCCEEEEecCCC
Confidence 12232344567899999863 4444443 23455555555443
No 403
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=89.19 E-value=24 Score=38.32 Aligned_cols=161 Identities=10% Similarity=0.050 Sum_probs=84.7
Q ss_pred EEECCCCeEEEEEcCCCcceEEEcC-C---CCCcceeEEeecCC-cEEEEeCC-----CCeEEEEEcCCCceeEeccCCC
Q psy952 61 FADVAAKTIYRSRVGSTEKERVIRH-D---SHGLEGLAVDWVGR-KLYWLDRH-----SKQLDVAELDGTNRKTLKTAIQ 130 (573)
Q Consensus 61 ~~d~~~~~I~~~~~~g~~~~~i~~~-~---~~~p~glavD~~~~-~LY~td~~-----~~~I~~~~ldg~~~~~l~~~~~ 130 (573)
++....+.|+|..-.|...+.+... . +....+|++|+.+. +||++-.. .+.|++..-.|..-+.+... .
T Consensus 59 ~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p-~ 137 (685)
T 3f6k_A 59 IMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLP-F 137 (685)
T ss_dssp ----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECS-S
T ss_pred EEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCC-C
Confidence 3334455677766555555544321 1 12335799998654 78888642 46777766556544433321 1
Q ss_pred Cc-ceEEEeCCC-ceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCC-------C--e
Q psy952 131 DP-RGITLHPGI-GYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL-------D--Y 199 (573)
Q Consensus 131 ~P-~~Iavdp~~-g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~-------~--~ 199 (573)
.| ..|+++|.+ +.||+.. ....|++..=.|..=+.+. ..+. ...+. ..+.|||.-... + .
T Consensus 138 ~~~~~l~~~P~~~~~l~a~~--~~~gly~S~DgG~TW~~i~---~~v~---~~~f~-~~~~Iy~~~~~~~~~~~~~g~l~ 208 (685)
T 3f6k_A 138 HPLTQMMYSPQNSDYLLALS--TENGLWVSKNFGGKWEEIH---KAVC---LAKWG-SDNTIFFTTYANGSCKADLGALE 208 (685)
T ss_dssp CBSSCCEEETTEEEEEEEEB--TTCCEEEESSTTSSEEEEE---SSEE---EEEEC-STTCEEEEECSSSCTTTTTTSEE
T ss_pred CCceEEEEecCCCCEEEEEE--CCCCEEEEeCCCCCcEEee---cCcc---ccccC-CCCeEEEEeeccccccCCCCceE
Confidence 23 379999965 4566664 2457888655555544444 3331 22333 246788764221 1 2
Q ss_pred EEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEEec
Q psy952 200 IASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTD 236 (573)
Q Consensus 200 I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lywtd 236 (573)
|.+.+--|...+++. .+..++++.+++||++-
T Consensus 209 L~~S~D~g~t~~~l~-----~~i~~f~~~~~yl~va~ 240 (685)
T 3f6k_A 209 LWRTSDLGKSFKTIG-----VKIYSFGLGGRFLFASV 240 (685)
T ss_dssp EEEESSTTSSCEEEE-----EEEEEEEEETTEEEEEE
T ss_pred EEEecCCCCCceEee-----ccceeeeeeeeEEEEEE
Confidence 333322233333333 24567777888888863
No 404
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=89.19 E-value=30 Score=38.17 Aligned_cols=231 Identities=13% Similarity=0.108 Sum_probs=120.2
Q ss_pred EecccEEEEEcCCCceeeccc------------CCcceEEEEEEcC-CCEEEEEECC------CCeEEEEEcCCCcceEE
Q psy952 22 SNKYYVRNMSLDATQYSLVHQ------------DLLNVVAMDFHYK-ENRFYFADVA------AKTIYRSRVGSTEKERV 82 (573)
Q Consensus 22 s~~~~I~~i~l~g~~~~~~~~------------~~~~~~~v~~d~~-~~~ly~~d~~------~~~I~~~~~~g~~~~~i 82 (573)
+....|++-.=.|...+.+.. ....+.+|++|+. .+.||++-.. ...|+|..=.|...+.+
T Consensus 40 ~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~ 119 (763)
T 3a0f_A 40 TDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQY 119 (763)
T ss_dssp ESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEE
T ss_pred eccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceec
Confidence 335667766555655554433 2234789999985 4677876532 35677765555555544
Q ss_pred EcC-CC-----CCc--ceeEEeecC-CcEEEEeCCCCeEEEEEcCCCceeEecc---CC---CCcceEEEeCCC-ceEEE
Q psy952 83 IRH-DS-----HGL--EGLAVDWVG-RKLYWLDRHSKQLDVAELDGTNRKTLKT---AI---QDPRGITLHPGI-GYVYF 146 (573)
Q Consensus 83 ~~~-~~-----~~p--~glavD~~~-~~LY~td~~~~~I~~~~ldg~~~~~l~~---~~---~~P~~Iavdp~~-g~LYw 146 (573)
... .+ .+. ..|++++.. +.||..- ..+.|++..-.|..=+.+.. .. .....|+++|.. +.||+
T Consensus 120 ~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 198 (763)
T 3a0f_A 120 RSPVPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYV 198 (763)
T ss_dssp ECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEE
T ss_pred cCCcccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEE
Confidence 321 11 112 368998764 5676654 33567765544554443331 11 124577888864 46888
Q ss_pred EecCCcCeEEEEeccCCCcEEEEecCC-------------------CCCCCceEEEeccCCeEEEEe--------CCCCe
Q psy952 147 SSWNLQAYIGKIGMDGSNFTRILTHED-------------------DIAWPNALTLDYFTERLYWAD--------AHLDY 199 (573)
Q Consensus 147 td~~~~~~I~r~~ldG~~~~~l~~~~~-------------------~l~~P~glaiD~~~~~LYw~D--------~~~~~ 199 (573)
+.... ..|++..=.|..=+.+..... ....|..+++.+ .++||++- ...+.
T Consensus 199 ~~~~~-g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~g~ 276 (763)
T 3a0f_A 199 ASHAV-GGLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGK-NGRLYITYSDAPGPWGVLYGE 276 (763)
T ss_dssp EESST-TCEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECT-TSCEEEEEESSCSSSCCCCEE
T ss_pred EEeCC-CeEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECC-CCcEEEEeccCCCCCCCccee
Confidence 76421 157766544554333220000 112345567765 78888872 13457
Q ss_pred EEEEeCCCCcEEEEEeCCcccee---------------EEEeee-CCeEEEecCC---CCceEEEeccCCcceEEE
Q psy952 200 IASVDLDGKHKHIVISGQKVPHV---------------FALTLF-EDHIYWTDWN---TKSINRADKFNGRDYRVL 256 (573)
Q Consensus 200 I~~~~~dG~~~~~l~~~~~~~~p---------------~~ia~~-~~~lywtd~~---~~~I~~~~~~~g~~~~~l 256 (573)
|++.+-.|..-+.+......... .+|++. .+.||..-.. ...|++. ...|+.-+.+
T Consensus 277 v~rS~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~i~v~~~~~v~~~~~~~~~~~~l~~S-~DgG~tW~~~ 351 (763)
T 3a0f_A 277 VWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNGISVGNGDTVVVSTLDANGEDSVYLS-RDAGNSWKDL 351 (763)
T ss_dssp EEEEETTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEEEEECSTBCEEEEEESCTTSCCEEEE-SBTTSSEEEH
T ss_pred EEEEeCCCCceEECCCCCCCCccccccccccccccCCceeEEEcCCCeEEEEecCCCCCCCEEEE-CCCCCCcccC
Confidence 88776555443333211100011 367774 5677776531 1455554 2345544444
No 405
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=89.06 E-value=0.11 Score=46.82 Aligned_cols=88 Identities=20% Similarity=0.482 Sum_probs=57.6
Q ss_pred cceee-eccceeecCCCCCCCcccCCccccC-CCeee----ec--ceeeCCcCCCCCCC-CCCCCCC---CccccCCCCC
Q psy952 288 TTVAD-MIRSVYLGSGNKENSTCSSSQFRCN-NGKCI----DY--HLVCNKESDCEDDS-DEPLHCN---VDECAKVETN 355 (573)
Q Consensus 288 ~~~~C-Cp~~~~l~~d~~~~~~C~~~~~~C~-~g~Ci----~~--~~~cd~~~~c~d~s-de~~~c~---~~~C~~~~~~ 355 (573)
.+|+| |+.||.+......+++|...+ |. ++.|+ .. +|+|...++..... +.. .|. +++|..
T Consensus 72 g~y~C~C~~G~~g~~~~C~~d~C~~~~--C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~-~C~~~~~~~C~~---- 144 (186)
T 1z1y_A 72 NMYXCGCIEGYTLXEDTCVLDVCQYXN--CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEX-XCTXTGETACQL---- 144 (186)
T ss_dssp CSEEEEECTTEEEETTEEEEGGGTTCC--CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTT-EEEEEECCCCCC----
T ss_pred CCEECCCCCCCccCCCCCCCCcCcCCC--CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCC-cceEcCCCcccc----
Confidence 46899 999998865422256776553 75 57788 32 67786554443211 222 443 256642
Q ss_pred cc-CC--ccccCCCCccccCCCCceecCCC
Q psy952 356 QC-GH--KCVDTLTGYYCECNTGYKLLEDG 382 (573)
Q Consensus 356 ~C-~~--~C~~~~~~~~C~C~~~f~c~~~~ 382 (573)
.| .+ .|.+..++|.|.|+.+|......
T Consensus 145 ~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 145 XCNTDNEVCXNVEGVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp CCCTTTEEEEEETTEEEEEECTTCEEETTT
T ss_pred cccccCcceecCCCCeeeECCCCCccCccc
Confidence 68 44 89999999999999999876544
No 406
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.03 E-value=26 Score=37.26 Aligned_cols=16 Identities=13% Similarity=0.355 Sum_probs=13.6
Q ss_pred ceEEEeCCCceEEEEe
Q psy952 133 RGITLHPGIGYVYFSS 148 (573)
Q Consensus 133 ~~Iavdp~~g~LYwtd 148 (573)
.++|+||.++.||+..
T Consensus 415 ~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPA 430 (582)
T ss_dssp SCCEECTTTCCEEEEE
T ss_pred CCceECCCCCEEEEec
Confidence 4789999999999865
No 407
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.65 E-value=18 Score=35.03 Aligned_cols=190 Identities=10% Similarity=0.035 Sum_probs=95.5
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcC-CCceeE
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELD-GTNRKT 124 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ld-g~~~~~ 124 (573)
.+.+|++.. .+.+|++.. .+.|+|..-.|...+.+.........+|+++. .+.+|... ..+.|++..-. |..-+.
T Consensus 123 ~~~~i~~~~-~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 123 SPRLIKALG-NGSAEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVS-SRGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp CEEEEEEEE-TTEEEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEE-TTSSEEEEECTTCSSCEE
T ss_pred CeEEEEEEC-CCCEEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEE-CCCcEEEEeCCCCCceeE
Confidence 466777653 567877654 55687755445555544432223566777775 34555444 34667776543 444333
Q ss_pred ec-cCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc-CCCcEEEEecCCCCCC---CceEEEeccCCeEEEEeCCCCe
Q psy952 125 LK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-GSNFTRILTHEDDIAW---PNALTLDYFTERLYWADAHLDY 199 (573)
Q Consensus 125 l~-~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld-G~~~~~l~~~~~~l~~---P~glaiD~~~~~LYw~D~~~~~ 199 (573)
+. ........|++++ .+.+|.... ...|++...| |..-+.+. ...+.. ...|++++ .+.||.+-. .+.
T Consensus 199 ~~~~~~~~~~~~~~~~-~g~~~~~~~--~G~~~~s~~D~G~tW~~~~--~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~ 271 (327)
T 2xbg_A 199 HNRTTSRRLHNMGFTP-DGRLWMIVN--GGKIAFSDPDNSENWGELL--SPLRRNSVGFLDLAYRT-PNEVWLAGG-AGA 271 (327)
T ss_dssp EECCSSSCEEEEEECT-TSCEEEEET--TTEEEEEETTEEEEECCCB--CTTSSCCSCEEEEEESS-SSCEEEEES-TTC
T ss_pred CCCCCCCccceeEECC-CCCEEEEeC--CceEEEecCCCCCeeEecc--CCcccCCcceEEEEecC-CCEEEEEeC-CCe
Confidence 32 2223467888887 456666552 3456665445 32211111 110111 13455553 567777643 455
Q ss_pred EEEEeCCCCcEEEEEeCCcc-ceeEEEeeeCCeEEEecCCCCceEEEe
Q psy952 200 IASVDLDGKHKHIVISGQKV-PHVFALTLFEDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 200 I~~~~~dG~~~~~l~~~~~~-~~p~~ia~~~~~lywtd~~~~~I~~~~ 246 (573)
|++..-.|..-+.+.....+ ...+.|++.++..+|+-...+.|++.+
T Consensus 272 i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 272 LLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred EEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 65543334333333211101 234566664444445545566777664
No 408
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=88.40 E-value=0.25 Score=42.63 Aligned_cols=46 Identities=30% Similarity=0.754 Sum_probs=32.3
Q ss_pred CccccCCCCCccCC--ccccCCCCccccCCCCceecCCCcccccccccCCCCCCC
Q psy952 346 VDECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDIDECIEQPGVC 398 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~~~~~~~ 398 (573)
+++|.. .+|.+ .|.+..+++.|.|+.+|. +. -|.++++|...+..+
T Consensus 48 ideC~~---~pC~n~g~C~~~~~~y~C~C~~G~~---G~-~C~~~deC~~~~~~C 95 (146)
T 1x7a_L 48 GDQCEP---NPCLNGGLCKDDINSYECWCQVGFE---GK-NCELDATCNIKNGRC 95 (146)
T ss_dssp --CCSS---CSSCTTCEEEECSSCEEEECCSSEE---ST-TTCEECCTTSGGGSC
T ss_pred cCcCCC---CCCCCCCEeECCCCCEEEecCCCCc---CC-cCCCCccccCCCCCC
Confidence 566754 56877 799999999999999997 43 455668887544333
No 409
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=88.16 E-value=0.33 Score=38.07 Aligned_cols=72 Identities=15% Similarity=0.314 Sum_probs=40.8
Q ss_pred ceee-eccceeecCCCCCCCcccCCccccCCCeeeecceeeCCcCCCCCCCCCCCCC---CCccccCCCCCccCC--ccc
Q psy952 289 TVAD-MIRSVYLGSGNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHC---NVDECAKVETNQCGH--KCV 362 (573)
Q Consensus 289 ~~~C-Cp~~~~l~~d~~~~~~C~~~~~~C~~g~Ci~~~~~cd~~~~c~d~sde~~~c---~~~~C~~~~~~~C~~--~C~ 362 (573)
+|+| |+.+|.+..- .+++|... .|.++ ...|.|...++.. .| ++++|.. .+|.+ .|.
T Consensus 1 sy~C~C~~g~~g~~c--~~~~c~~~--pC~n~---~~~y~C~C~~G~~-------~C~~~~~~~C~~---~pC~ngg~C~ 63 (91)
T 1tpg_A 1 SYQVICRDEKTQMIY--QQHQSWLR--PVLRS---NRVEYCWCNSGRA-------QCHSVPVKSCSE---PRCFNGGTCQ 63 (91)
T ss_dssp CCCCCCBCSSSCCBC--CSSCEEEE--ECSSS---SCEEEEECSSSCC-------BCCEECEEECSS---CCSCTTCEEE
T ss_pred CeeeECCCCCcCCeE--CCCcccCC--ccccC---CCCcEeECCCCCc-------ccccCcCCcccC---CCCCCCCEee
Confidence 3678 8888865321 13344222 12222 2345564433332 23 2566754 45876 688
Q ss_pred cCC--CCccccCCCCce
Q psy952 363 DTL--TGYYCECNTGYK 377 (573)
Q Consensus 363 ~~~--~~~~C~C~~~f~ 377 (573)
+.. +.+.|.|+.+|.
T Consensus 64 ~~~~~~~~~C~C~~G~~ 80 (91)
T 1tpg_A 64 QALYFSDFVCQCPEGFA 80 (91)
T ss_dssp EESSSSCEEEECCTTCB
T ss_pred cCCCCCCeEeECCCCCc
Confidence 776 889999999985
No 410
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.43 E-value=31 Score=36.15 Aligned_cols=193 Identities=7% Similarity=-0.099 Sum_probs=102.2
Q ss_pred CcceEEEEEEcC-----CCEEEEEECCCCeEEEEEcCCCcce-----------EEEcCCCCCcceeEEeecCCcEEEEeC
Q psy952 44 LLNVVAMDFHYK-----ENRFYFADVAAKTIYRSRVGSTEKE-----------RVIRHDSHGLEGLAVDWVGRKLYWLDR 107 (573)
Q Consensus 44 ~~~~~~v~~d~~-----~~~ly~~d~~~~~I~~~~~~g~~~~-----------~i~~~~~~~p~glavD~~~~~LY~td~ 107 (573)
...+..|+|.+. .+.+..+-...+.|...++...... ..+...-..+..+++.. ..+.++-.
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~--~~~lasgs 284 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PTTVVCGF 284 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS--SSEEEEEE
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC--CCeEEEEe
Confidence 355789999985 2356665566778888888653211 11221223455566543 34555666
Q ss_pred CCCeEEEEEcCCC-cee-EeccCCCCcceEE-EeCCCc-eEEEEecCCcCeEEEEeccC-CCcEEEEecCCCCCCCceEE
Q psy952 108 HSKQLDVAELDGT-NRK-TLKTAIQDPRGIT-LHPGIG-YVYFSSWNLQAYIGKIGMDG-SNFTRILTHEDDIAWPNALT 182 (573)
Q Consensus 108 ~~~~I~~~~ldg~-~~~-~l~~~~~~P~~Ia-vdp~~g-~LYwtd~~~~~~I~r~~ldG-~~~~~l~~~~~~l~~P~gla 182 (573)
..+.|.+.++... ... ++........+|+ ..+..+ .++.|-. ....|..-++.. ....++.. .........++
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S-~D~tvklWD~~~~~~~~~~~~-~~~~~~v~~v~ 362 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA-VDGYFYIFNPKDIATTKTTVS-RFRGSNLVPVV 362 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE-TTSEEEEECGGGHHHHCEEEE-ECSCCSCCCEE
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec-cCCeEEEEECCCCCccccccc-ccccCcccceE
Confidence 7789999998743 322 2333444567774 234355 6666653 345666666542 22223331 11111246788
Q ss_pred EeccCCeEEEEeCCCCeEEEEeCCCCc-EEEEEeCCccceeEEEeee-CCeEEEecCCCCceE
Q psy952 183 LDYFTERLYWADAHLDYIASVDLDGKH-KHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSIN 243 (573)
Q Consensus 183 iD~~~~~LYw~D~~~~~I~~~~~dG~~-~~~l~~~~~~~~p~~ia~~-~~~lywtd~~~~~I~ 243 (573)
+.+... .+.+-...+.|...++.... ...+... .....+|++. .+.++.+-...+.|.
T Consensus 363 fsp~~~-~l~s~~~d~tv~lwd~~~~~~~~~l~gH--~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 363 YCPQIY-SYIYSDGASSLRAVPSRAAFAVHPLVSR--ETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp EETTTT-EEEEECSSSEEEEEETTCTTCCEEEEEC--SSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred eCCCcC-eEEEeCCCCcEEEEECcccccceeeecC--CCceEEEEeCCCCCeEEEEECCCEEE
Confidence 886544 45555566677777765433 2333322 3355677763 233334433444443
No 411
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=87.18 E-value=0.36 Score=35.88 Aligned_cols=34 Identities=26% Similarity=0.527 Sum_probs=24.8
Q ss_pred CccccCCCCCccCC--ccccCCCCccccCC-CCceecC
Q psy952 346 VDECAKVETNQCGH--KCVDTLTGYYCECN-TGYKLLE 380 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~~~~~~~~C~C~-~~f~c~~ 380 (573)
++||.. ....|.. .|.|+.++|.|.+. .+|....
T Consensus 3 idEC~~-~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 3 VNECLT-IPEACKGEMKCINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp SCCTTC-CCCSCTTEEEEEETTCCEEEEETTSCCCSCC
T ss_pred cccccC-CCCCCCCCCEeECCCCCeEecccCCcccccc
Confidence 567765 4567865 79999999999844 6776543
No 412
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.85 E-value=21 Score=33.76 Aligned_cols=212 Identities=11% Similarity=0.091 Sum_probs=112.1
Q ss_pred ccEEEEEcCCCceeecc--cCCcceEEEEEEcCCCEEEEEECC-----CCeEEEEEcCCCcceEEEcCCCCC-cceeEEe
Q psy952 25 YYVRNMSLDATQYSLVH--QDLLNVVAMDFHYKENRFYFADVA-----AKTIYRSRVGSTEKERVIRHDSHG-LEGLAVD 96 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~--~~~~~~~~v~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~i~~~~~~~-p~glavD 96 (573)
+.+..+++.......+. +....-.+++.. +++||+.--. ...++++++.....+.+......+ -.++++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV- 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-
Confidence 46777887765544331 111111233333 7889997432 246888988765555443211111 123333
Q ss_pred ecCCcEEEEeCC-----CCeEEEEEcCCCceeEeccCCCCcc---eEEEeCCCceEEEEecC--C----cCeEEEEeccC
Q psy952 97 WVGRKLYWLDRH-----SKQLDVAELDGTNRKTLKTAIQDPR---GITLHPGIGYVYFSSWN--L----QAYIGKIGMDG 162 (573)
Q Consensus 97 ~~~~~LY~td~~-----~~~I~~~~ldg~~~~~l~~~~~~P~---~Iavdp~~g~LYwtd~~--~----~~~I~r~~ldG 162 (573)
.+++||+.-.. .+.++++++....-+.+. .+..|+ ++++. ++.||+.-.. . ...+++.++..
T Consensus 107 -~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 107 -LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-PMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp -ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred -ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-CCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 47899997421 246888888765544443 222222 33433 6789987421 0 34578887764
Q ss_pred CCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEEE
Q psy952 163 SNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYW 234 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~lyw 234 (573)
..-+.+ ..+..|. ++++ .+++||+.-.. .+.|+++++....=+.+........-.++++.++.||+
T Consensus 183 ~~W~~~----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v 256 (302)
T 2xn4_A 183 NEWTYI----AEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYV 256 (302)
T ss_dssp TEEEEE----CCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred CcEEEC----CCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEE
Confidence 432222 2232232 3333 37899998432 35789999876544444321101122456677889988
Q ss_pred ecCCC-----CceEEEeccC
Q psy952 235 TDWNT-----KSINRADKFN 249 (573)
Q Consensus 235 td~~~-----~~I~~~~~~~ 249 (573)
.-..+ ..|++.+..+
T Consensus 257 ~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 257 VGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp ECCBCSSSBCCCEEEEETTT
T ss_pred ECCcCCCcccccEEEEcCCC
Confidence 74322 3355555433
No 413
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.36 E-value=38 Score=36.16 Aligned_cols=18 Identities=6% Similarity=0.121 Sum_probs=15.1
Q ss_pred CcceEEEeCCCceEEEEe
Q psy952 131 DPRGITLHPGIGYVYFSS 148 (573)
Q Consensus 131 ~P~~Iavdp~~g~LYwtd 148 (573)
+..++|+||.++.||+..
T Consensus 394 ~w~~~a~dp~~~~~yv~~ 411 (599)
T 1w6s_A 394 NQGHDSYDPKRELFFMGI 411 (599)
T ss_dssp CSCBCEEETTTTEEEEEE
T ss_pred CCCCccCCCCCCEEEEec
Confidence 456899999999999875
No 414
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.17 E-value=22 Score=33.30 Aligned_cols=228 Identities=10% Similarity=0.014 Sum_probs=120.2
Q ss_pred ceeeCCCCCCEEEEEe-cccEEEEEcCCCceeeccc-CCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcce-EEEc
Q psy952 8 TCKRRDSIKPWLIFSN-KYYVRNMSLDATQYSLVHQ-DLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKE-RVIR 84 (573)
Q Consensus 8 ~C~~~~~~~~~l~~s~-~~~I~~i~l~g~~~~~~~~-~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~i~~ 84 (573)
+|.+......+|+.+. ...|+..++...+...... ....+..+.++ .. +..+....+.+........... ..+.
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEEc
Confidence 4554443334555444 4567777776554322222 22334444444 33 3444444555665555443322 2222
Q ss_pred CCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce-eE----eccCCCCcceEEEeCCCceEEEEecC-CcCeEEEE
Q psy952 85 HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR-KT----LKTAIQDPRGITLHPGIGYVYFSSWN-LQAYIGKI 158 (573)
Q Consensus 85 ~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~-~~----l~~~~~~P~~Iavdp~~g~LYwtd~~-~~~~I~r~ 158 (573)
........+++...++ ++++-...+.|.+.++..... .. ..........++..|....++++-.+ ....|...
T Consensus 148 ~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 226 (318)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred CccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence 3335666777776544 445555667888888754321 11 11233346778888877776655433 34456555
Q ss_pred eccCCCcEEEEecCCCCCCCceEEEeccCCeEEEEeC-CCCeEEEEeCCCCcEEEEEeCCccceeEEEeee-CCeEEEec
Q psy952 159 GMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADA-HLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTD 236 (573)
Q Consensus 159 ~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~-~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~-~~~lywtd 236 (573)
++......... ........+++.+..+.|+.+-. ..+.|...++........+.+. .....+|++. ++.+++|-
T Consensus 227 d~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH-~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 227 NVCSGACLSAV---DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH-TSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp ETTTCCEEEEE---ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSCEEEE
T ss_pred ecccccccccc---cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC-CCCEEEEEEcCCCCEEEEE
Confidence 55544433333 23334567788888888887654 4678888888654443333332 3455677774 34444444
Q ss_pred CCCCceE
Q psy952 237 WNTKSIN 243 (573)
Q Consensus 237 ~~~~~I~ 243 (573)
...+.|.
T Consensus 303 s~D~~v~ 309 (318)
T 4ggc_A 303 AADETLR 309 (318)
T ss_dssp ETTTEEE
T ss_pred ecCCeEE
Confidence 3444443
No 415
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.15 E-value=26 Score=34.09 Aligned_cols=200 Identities=7% Similarity=-0.058 Sum_probs=102.8
Q ss_pred cccEEEEEcCC--Cceeeccc---CCcceEEEEEEcCCCEEEEEECC----------CCeEEEEEcCCCcceEEEcCCCC
Q psy952 24 KYYVRNMSLDA--TQYSLVHQ---DLLNVVAMDFHYKENRFYFADVA----------AKTIYRSRVGSTEKERVIRHDSH 88 (573)
Q Consensus 24 ~~~I~~i~l~g--~~~~~~~~---~~~~~~~v~~d~~~~~ly~~d~~----------~~~I~~~~~~g~~~~~i~~~~~~ 88 (573)
.+.++++++.. ...+.+.. ....-.++++- +++||+.--. ...++++++.....+.+.... .
T Consensus 30 ~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p 106 (357)
T 2uvk_A 30 GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-P 106 (357)
T ss_dssp TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-S
T ss_pred CCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-C
Confidence 35788999863 33333321 11112233332 6899996332 246888888765544432211 1
Q ss_pred Ccc---eeEEeecCCcEEEEeCC---------------------------------------CCeEEEEEcCCCceeEec
Q psy952 89 GLE---GLAVDWVGRKLYWLDRH---------------------------------------SKQLDVAELDGTNRKTLK 126 (573)
Q Consensus 89 ~p~---glavD~~~~~LY~td~~---------------------------------------~~~I~~~~ldg~~~~~l~ 126 (573)
.+. ++++ .+++||+.-.. .+.++++++....-+.+.
T Consensus 107 ~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 184 (357)
T 2uvk_A 107 MGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG 184 (357)
T ss_dssp SCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE
T ss_pred cccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC
Confidence 221 2333 57899997642 367999998765544443
Q ss_pred cCCCCc----ceEEEeCCCceEEEEecC-----CcCeEEEEeccCCCcEEEEecCCCCCCCc---eEEEeccCCeEEEEe
Q psy952 127 TAIQDP----RGITLHPGIGYVYFSSWN-----LQAYIGKIGMDGSNFTRILTHEDDIAWPN---ALTLDYFTERLYWAD 194 (573)
Q Consensus 127 ~~~~~P----~~Iavdp~~g~LYwtd~~-----~~~~I~r~~ldG~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D 194 (573)
. +..| .++++. ++.||+.-.. ....+++.++|-...+-.. ...+..|. +.++-..+++||+.-
T Consensus 185 ~-~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~--~~~~~~~~~~~~~~~~~~~~~iyv~G 259 (357)
T 2uvk_A 185 E-SPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK--LAPVSSPDGVAGGFAGISNDSLIFAG 259 (357)
T ss_dssp E-CSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEE--CCCSSTTTCCBSCEEEEETTEEEEEC
T ss_pred C-CCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEe--cCCCCCCcccccceEEEECCEEEEEc
Confidence 2 2111 344443 6789887421 1345777776433333222 23343443 222223478999975
Q ss_pred CCC----------------------CeEEEEeCCCCcEEEEEeCCcccee---EEEeeeCCeEEEec
Q psy952 195 AHL----------------------DYIASVDLDGKHKHIVISGQKVPHV---FALTLFEDHIYWTD 236 (573)
Q Consensus 195 ~~~----------------------~~I~~~~~dG~~~~~l~~~~~~~~p---~~ia~~~~~lywtd 236 (573)
... ..++++++....=+.+.. ++.| .++++.+++||+.-
T Consensus 260 G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 260 GAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE---LSQGRAYGVSLPWNNSLLIIG 323 (357)
T ss_dssp CEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE---CSSCCBSSEEEEETTEEEEEE
T ss_pred CccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC---CCCCcccceeEEeCCEEEEEe
Confidence 311 257778877544344432 2222 34556788888863
No 416
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=86.01 E-value=0.14 Score=42.35 Aligned_cols=78 Identities=26% Similarity=0.491 Sum_probs=46.7
Q ss_pred CCcccCCccccCCCeeeec---ceeeCCcCCCCCCCCCCCCCCCccccCC-CCCccCCccccCCCCccccCCCCceecCC
Q psy952 306 NSTCSSSQFRCNNGKCIDY---HLVCNKESDCEDDSDEPLHCNVDECAKV-ETNQCGHKCVDTLTGYYCECNTGYKLLED 381 (573)
Q Consensus 306 ~~~C~~~~~~C~~g~Ci~~---~~~cd~~~~c~d~sde~~~c~~~~C~~~-~~~~C~~~C~~~~~~~~C~C~~~f~c~~~ 381 (573)
+++|.. ..|.+ .|++. +|+|...++..... +++++|... ....|...|.+ .+.+.|.|+.+|+...+
T Consensus 4 ideC~~--~pC~~-~C~~~~~g~y~C~C~~Gy~g~~-----~~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~g 74 (118)
T 1dx5_I 4 VDPCFR--ANCEY-QCQPLDQTSYLCVCAEGFAPIP-----HEPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDDG 74 (118)
T ss_dssp CCGGGG--CCCSS-EEEECSSSCEEEECCTTEEEET-----TEEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEETT
T ss_pred cccCCC--CCCCC-CCCCCCCCCEEeECCCCccccC-----CCCCccccccCCCCCCCcccC-CCCeEeECCCCccCCCC
Confidence 345643 23554 77765 68886544443221 123344320 13456566777 58899999999998765
Q ss_pred CcccccccccCC
Q psy952 382 GKACTDIDECIE 393 (573)
Q Consensus 382 ~~c~~~~~~C~~ 393 (573)
..| .++++|..
T Consensus 75 ~~C-~dideC~~ 85 (118)
T 1dx5_I 75 FIC-TDIDECEN 85 (118)
T ss_dssp TEE-EECCHHHH
T ss_pred Ccc-ccccccCC
Confidence 545 78889875
No 417
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.40 E-value=21 Score=34.13 Aligned_cols=194 Identities=9% Similarity=0.113 Sum_probs=97.7
Q ss_pred EEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEECCC-------CeEEEEEcCCCcceEEEcCCCC-CcceeEEe
Q psy952 27 VRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADVAA-------KTIYRSRVGSTEKERVIRHDSH-GLEGLAVD 96 (573)
Q Consensus 27 I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~~~-------~~I~~~~~~g~~~~~i~~~~~~-~p~glavD 96 (573)
+.++++.....+.+.. ....-.+++.. +++||+.--.. ..++++++.....+.+...... .-.++++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 156 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS- 156 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-
Confidence 6677776655443311 11112233333 68899975321 3588888876555544221111 1122333
Q ss_pred ecCCcEEEEeC------CCCeEEEEEcCCCceeEeccCCCCcc---eEEEeCCCceEEEEecCC----cCeEEEEeccCC
Q psy952 97 WVGRKLYWLDR------HSKQLDVAELDGTNRKTLKTAIQDPR---GITLHPGIGYVYFSSWNL----QAYIGKIGMDGS 163 (573)
Q Consensus 97 ~~~~~LY~td~------~~~~I~~~~ldg~~~~~l~~~~~~P~---~Iavdp~~g~LYwtd~~~----~~~I~r~~ldG~ 163 (573)
.+++||+.-. ..+.++++++....-+.+. .+..|+ ++++. ++.||+.-... ...+++.++...
T Consensus 157 -~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 157 -HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp -ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred -ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC-CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 5789999753 1356899998765544443 222222 34443 57899885211 245777777654
Q ss_pred CcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC--------------CCeEEEEeCCCCcEEEEEeCCccceeEEEe
Q psy952 164 NFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH--------------LDYIASVDLDGKHKHIVISGQKVPHVFALT 226 (573)
Q Consensus 164 ~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~--------------~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia 226 (573)
.=+.+ ..+..|. ++++ .+++||+.-.. .+.|+++++....=+.+... .....+.+
T Consensus 233 ~W~~~----~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~--~r~~~~~~ 304 (318)
T 2woz_A 233 KWEVM----TEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKE--IRYASGAS 304 (318)
T ss_dssp CEEEC----CCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEESC--CGGGTTCE
T ss_pred eEEEC----CCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhccc--ccccccce
Confidence 32222 2233332 3333 46888887321 34566777655433333221 12223444
Q ss_pred eeCCeEEEe
Q psy952 227 LFEDHIYWT 235 (573)
Q Consensus 227 ~~~~~lywt 235 (573)
+.+++||+.
T Consensus 305 ~~~~~iyi~ 313 (318)
T 2woz_A 305 CLATRLNLF 313 (318)
T ss_dssp EEEEEEEGG
T ss_pred eeCCEEEEE
Confidence 556666643
No 418
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=85.36 E-value=0.43 Score=32.91 Aligned_cols=29 Identities=7% Similarity=-0.163 Sum_probs=23.9
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
+.|.|.|+..+ ++|+| |+.||.+..++++
T Consensus 20 ~~C~~~C~n~~---Gsy~C~C~~Gy~~~~d~~~ 49 (53)
T 1apq_A 20 PQCQHLCHNYV---GGYFCSCRPGYELQEDRHS 49 (53)
T ss_dssp CTTSSEEEEET---TEEEEECSTTCEECTTSSC
T ss_pred CCCCCEeECCC---CCeEEECCCCCeECCCCCc
Confidence 46889999888 67999 9999999776553
No 419
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.14 E-value=41 Score=35.47 Aligned_cols=139 Identities=16% Similarity=0.140 Sum_probs=85.5
Q ss_pred CCcceeEEeecCCcEEEEeCCCCeEEEEEcCC----------CceeEec---cCCCCcceEEEeCCCceEEEEecCCcCe
Q psy952 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG----------TNRKTLK---TAIQDPRGITLHPGIGYVYFSSWNLQAY 154 (573)
Q Consensus 88 ~~p~glavD~~~~~LY~td~~~~~I~~~~ldg----------~~~~~l~---~~~~~P~~Iavdp~~g~LYwtd~~~~~~ 154 (573)
.+|.|+.+++.++.+|++.....++.|++... ..+.+++ .....|...++|+ +|+.|.|-. ..+.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlf-idSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLF-IDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEET-TTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeee-ecce
Confidence 68999999999999999999999999998762 1122222 2334699999999 679998864 3456
Q ss_pred EEEEecc-------CCCcEEEEecCCCCCCCceE------EEeccCCeEEEEeCCC------------CeEEEEeCCCCc
Q psy952 155 IGKIGMD-------GSNFTRILTHEDDIAWPNAL------TLDYFTERLYWADAHL------------DYIASVDLDGKH 209 (573)
Q Consensus 155 I~r~~ld-------G~~~~~l~~~~~~l~~P~gl------aiD~~~~~LYw~D~~~------------~~I~~~~~dG~~ 209 (573)
|.+-+++ |.....++.....-..|.-+ +.++++++|....--. ..-..+++.|..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCc
Confidence 7666654 33322233111222233333 3455566665543311 134667888888
Q ss_pred EEEEEeCCcccee-EEEeee
Q psy952 210 KHIVISGQKVPHV-FALTLF 228 (573)
Q Consensus 210 ~~~l~~~~~~~~p-~~ia~~ 228 (573)
.++|.....++.| +++.+.
T Consensus 481 M~lv~D~P~~~EPHda~~v~ 500 (638)
T 3sbq_A 481 MKLVHDGPTFAEPHDCIMAR 500 (638)
T ss_dssp CEEEEEEEESSCCCCEEEEE
T ss_pred eEEEecCCCCCCCcceEEec
Confidence 8888764334444 234443
No 420
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.87 E-value=31 Score=32.94 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=80.8
Q ss_pred EEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEECC--------CCeEEEEEcCCCcceEEEcCCCCCcc-eeEE
Q psy952 27 VRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADVA--------AKTIYRSRVGSTEKERVIRHDSHGLE-GLAV 95 (573)
Q Consensus 27 I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~i~~~~~~~p~-glav 95 (573)
+.++++.....+.+.. ....-.++++. +++||+.--. ...++++++.....+.+.. +..|. +.+.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~p~~r~~~~~ 144 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP--LPYVVYGHTV 144 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC--CSSCCBSCEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC--CCCcccceeE
Confidence 6777777655443321 11111233333 7899997431 2468899987655443322 22221 1112
Q ss_pred eecCCcEEEEeCC------CCeEEEEEcCCCceeEeccCCCCcc---eEEEeCCCceEEEEecCC----cCeEEEEeccC
Q psy952 96 DWVGRKLYWLDRH------SKQLDVAELDGTNRKTLKTAIQDPR---GITLHPGIGYVYFSSWNL----QAYIGKIGMDG 162 (573)
Q Consensus 96 D~~~~~LY~td~~------~~~I~~~~ldg~~~~~l~~~~~~P~---~Iavdp~~g~LYwtd~~~----~~~I~r~~ldG 162 (573)
-..+++||+.-.. .+.++++++....-+.+. .+..|+ ++++. ++.||+.-... ...+++.++..
T Consensus 145 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 145 LSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA-PMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred EEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC-CCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 2257889998543 357899998765444433 222232 33333 57888875211 23677777754
Q ss_pred CCcEEEEecCCCCCCCc---eEEEeccCCeEEEEe
Q psy952 163 SNFTRILTHEDDIAWPN---ALTLDYFTERLYWAD 194 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D 194 (573)
..=+.+ ..+..|. ++++ .+++||+.-
T Consensus 222 ~~W~~~----~~~p~~r~~~~~~~--~~~~l~v~G 250 (315)
T 4asc_A 222 NKWAPF----EAFPQERSSLSLVS--LVGTLYAIG 250 (315)
T ss_dssp TEEEEE----CCCSSCCBSCEEEE--ETTEEEEEE
T ss_pred CeEEEC----CCCCCcccceeEEE--ECCEEEEEC
Confidence 432222 2233332 3333 367888864
No 421
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=83.79 E-value=1.1 Score=43.81 Aligned_cols=42 Identities=31% Similarity=0.781 Sum_probs=31.3
Q ss_pred CccccCCCCCccCC--ccccCCCCccccCCCCceecCCCcccccccccCC
Q psy952 346 VDECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDIDECIE 393 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~~ 393 (573)
+++|.. .+|.+ .|.+..+++.|.|+.+|. +..|-.++++|..
T Consensus 5 ~~~C~~---~pC~~~g~C~~~~~~~~C~C~~g~~---g~~C~~~~~eC~~ 48 (317)
T 3h5c_B 5 GSPCIS---QPCLHNGSCQDSIWGYTCTCSPGYE---GSNCELAKNECHP 48 (317)
T ss_dssp -CCTTS---CCCTTTCCCCCCSSSCCCCCSSSCC---SSSSCCCSSSCCT
T ss_pred CCcCCC---CCCCCCCEeECCCCCeEEECCCCCc---CCccccCcccCCC
Confidence 345644 45776 799999999999999996 5546558999975
No 422
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=82.98 E-value=0.15 Score=46.36 Aligned_cols=62 Identities=29% Similarity=0.733 Sum_probs=12.3
Q ss_pred CCccccCCCCCccCC--ccccCCCCccccCCCCceecCCCcccccc-cccCCCCCCCCCCCCCCCCCCCCCCCceecC
Q psy952 345 NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDI-DECIEQPGVCSQYPAMCHNRPCDKDTEFACR 419 (573)
Q Consensus 345 ~~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~-~~C~~~~~~~~~~~~~C~~~~C~~~~~f~C~ 419 (573)
++++|.. .+|.+ .|.+..++|.|.|+.+|. +..|..++ ++|...+..+.. .|.+. .+ .|+|.
T Consensus 41 dideC~~---~pC~ngg~C~n~~g~y~C~C~~Gf~---G~~Ce~~i~deC~~~~~~C~~---~C~n~---~g-sy~C~ 105 (195)
T 1nfu_B 41 DGDQCET---SPCQNQGKCKDGLGEYTCTCLEGFE---GKNCELFTRKLCSLDNGDCDQ---FCHEE---QN-SVVCS 105 (195)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSS---EEEEE---TT-EEEEE
T ss_pred CCcccCC---CCCCCCCEeECCCCCeeEeCCCCce---eccccccccccccCCCCCCCC---EeECC---CC-CeEEE
Confidence 3567754 56877 899999999999999997 54455556 778754433322 45443 34 67764
No 423
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=82.94 E-value=29 Score=34.87 Aligned_cols=138 Identities=10% Similarity=0.111 Sum_probs=76.8
Q ss_pred eCCCCCCEEEEEecccEEEEEcCCCc---------ee--ecccCCcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcc
Q psy952 11 RRDSIKPWLIFSNKYYVRNMSLDATQ---------YS--LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEK 79 (573)
Q Consensus 11 ~~~~~~~~l~~s~~~~I~~i~l~g~~---------~~--~~~~~~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 79 (573)
+.......|+.+....++..+++... +. ..+. +..+..|+| .++.||++ ..+.|..+++.....
T Consensus 44 ais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~~ 118 (388)
T 1xip_A 44 DISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE-IPDVIFVCF--HGDQVLVS--TRNALYSLDLEELSE 118 (388)
T ss_dssp EEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTTEEEEEE--ETTEEEEE--ESSEEEEEESSSTTC
T ss_pred EEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee-CCCeeEEEE--CCCEEEEE--cCCcEEEEEchhhhc
Confidence 33344556666666777776654221 11 1222 233889999 57888888 557899998765332
Q ss_pred e-EEEcCCCCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCCcCeEEEE
Q psy952 80 E-RVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKI 158 (573)
Q Consensus 80 ~-~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~ 158 (573)
. .+..... ... .+-+...++.... ..|.|.+.++.......+. ...+.++.+| +| +++.- ..+.|...
T Consensus 119 ~~~~~~~~~-~v~--~i~~~~p~~av~~-~dG~L~v~dl~~~~~~~~~---~~Vs~v~WSp-kG-~~vg~--~dg~i~~~ 187 (388)
T 1xip_A 119 FRTVTSFEK-PVF--QLKNVNNTLVILN-SVNDLSALDLRTKSTKQLA---QNVTSFDVTN-SQ-LAVLL--KDRSFQSF 187 (388)
T ss_dssp EEEEEECSS-CEE--EEEECSSEEEEEE-TTSEEEEEETTTCCEEEEE---ESEEEEEECS-SE-EEEEE--TTSCEEEE
T ss_pred cCccceeec-cee--eEEecCCCEEEEE-CCCCEEEEEccCCcccccc---CCceEEEEcC-Cc-eEEEE--cCCcEEEE
Confidence 2 1211111 122 2334454555543 5678888888755444333 3467888888 44 44433 24556666
Q ss_pred eccCCC
Q psy952 159 GMDGSN 164 (573)
Q Consensus 159 ~ldG~~ 164 (573)
..++..
T Consensus 188 ~~~~~~ 193 (388)
T 1xip_A 188 AWRNGE 193 (388)
T ss_dssp EEETTE
T ss_pred cCCCcc
Confidence 666665
No 424
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=81.07 E-value=60 Score=34.39 Aligned_cols=169 Identities=6% Similarity=0.010 Sum_probs=105.3
Q ss_pred CcceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCcceEEEcCCC----CCcceeEEeecCCcEEEEeCCCCeEEEEEcCC
Q psy952 44 LLNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDS----HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDG 119 (573)
Q Consensus 44 ~~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~----~~p~glavD~~~~~LY~td~~~~~I~~~~ldg 119 (573)
...+.+++|.+.+..|-.+.. ++.|+..+.++ ....+.... .....|++.+.++.|+.+.. .+.|.+.++.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~-dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~-DGtVkIWd~~~ 160 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN-NGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE-DGELQFFSIRK 160 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET-TSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEET-TSEEEEEECCC
T ss_pred CCcEEEEEECCCCCEEEEEeC-CCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcC-CCEEEEEECCC
Confidence 456899999997777776654 45566666544 111122111 14788999998888888764 67899999887
Q ss_pred Cce--------eEec----cCCCCcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcE----EEEecCCCCCCCceEEE
Q psy952 120 TNR--------KTLK----TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT----RILTHEDDIAWPNALTL 183 (573)
Q Consensus 120 ~~~--------~~l~----~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~----~l~~~~~~l~~P~glai 183 (573)
... .++. ........|+..|. | | .+-. ....|...++++.... .+. ...-....++++
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-g-L-aass-~D~tVrlWd~~~~~~~~~~~tL~--~~h~~~V~svaF 234 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-V-L-VAAL-SNNSVFSMTVSASSHQPVSRMIQ--NASRRKITDLKI 234 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-E-E-EEEE-TTCCEEEECCCSSSSCCCEEEEE--CCCSSCCCCEEE
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCC-c-E-EEEe-CCCeEEEEECCCCccccceeeec--ccccCcEEEEEE
Confidence 642 3332 12346899999995 4 3 3332 3566777777776632 232 112234577787
Q ss_pred eccCCeEEEEeCCCCeEEEEeCCCCcEEEEEeCCccceeEEEee
Q psy952 184 DYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTL 227 (573)
Q Consensus 184 D~~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~ 227 (573)
. ++.|-.+- .+.|...+..+....++..+. .....+|++
T Consensus 235 s--g~~LASa~--~~tIkLWd~~~~~~~~~~~gh-~~~V~~va~ 273 (588)
T 2j04_A 235 V--DYKVVLTC--PGYVHKIDLKNYSISSLKTGS-LENFHIIPL 273 (588)
T ss_dssp E--TTEEEEEC--SSEEEEEETTTTEEEEEECSC-CSCCCEEEE
T ss_pred E--CCEEEEEe--CCeEEEEECCCCeEEEEEcCC-CceEEEEEe
Confidence 6 45555553 478999999887775555342 344455666
No 425
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=78.07 E-value=0.78 Score=40.48 Aligned_cols=31 Identities=39% Similarity=1.167 Sum_probs=25.4
Q ss_pred ccCCccccCCCCccccCCCCceecCCCcccc
Q psy952 356 QCGHKCVDTLTGYYCECNTGYKLLEDGKACT 386 (573)
Q Consensus 356 ~C~~~C~~~~~~~~C~C~~~f~c~~~~~c~~ 386 (573)
.|.+.|.+..+++.|.|+.+|.+..+++.|.
T Consensus 136 ~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 136 TCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp SSSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred ccCCccccCCCCEEEeCCCCcEECCCCCccc
Confidence 3878899999999999999999876655443
No 426
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=77.69 E-value=0.68 Score=29.56 Aligned_cols=29 Identities=34% Similarity=0.902 Sum_probs=21.9
Q ss_pred CccccCCCCCccCC--ccccCCCCccccCCCCce
Q psy952 346 VDECAKVETNQCGH--KCVDTLTGYYCECNTGYK 377 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~ 377 (573)
+++|.. .+|.+ .|.+..+++.|.|+.+|.
T Consensus 3 ~d~C~~---~pC~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 3 GDQCES---NPCLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCTTTT---CCCCTTCEEEEETTEEEEECCTTCC
T ss_pred cccCCC---CCCCCCCEeEcCCCceEeECCCCCc
Confidence 345543 46776 788888999999998885
No 427
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=77.28 E-value=1.3 Score=30.49 Aligned_cols=31 Identities=29% Similarity=0.808 Sum_probs=22.3
Q ss_pred ccccCCCCCccCC--ccc--cCCCCccccCCCCce
Q psy952 347 DECAKVETNQCGH--KCV--DTLTGYYCECNTGYK 377 (573)
Q Consensus 347 ~~C~~~~~~~C~~--~C~--~~~~~~~C~C~~~f~ 377 (573)
++|.+....+|.+ .|. +..+++.|.|+.+|.
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~ 38 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS 38 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc
Confidence 4554422346877 788 788999999999985
No 428
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=76.20 E-value=54 Score=31.12 Aligned_cols=206 Identities=8% Similarity=-0.038 Sum_probs=108.4
Q ss_pred EEEEEecccEEEEEcCCCceeecc-c--CCcceEEEEEEcCCCEEEEEECC-----C------CeEEEEEcCCCcceEEE
Q psy952 18 WLIFSNKYYVRNMSLDATQYSLVH-Q--DLLNVVAMDFHYKENRFYFADVA-----A------KTIYRSRVGSTEKERVI 83 (573)
Q Consensus 18 ~l~~s~~~~I~~i~l~g~~~~~~~-~--~~~~~~~v~~d~~~~~ly~~d~~-----~------~~I~~~~~~g~~~~~i~ 83 (573)
+|++-....+.++++......... + ....-.+++ ..+++||+.--. . ..++++++.....+.+.
T Consensus 6 ~l~~~GG~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 6 LIFMISEEGAVAYDPAANECYCASLSSQVPKNHVSLV--TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEECCCCSCSSEEEEE--CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEEcCCceEEECCCCCeEecCCCCCCCCccceEEE--EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 444444578889998876554321 1 112223333 347888886541 1 13778887655444332
Q ss_pred cCCCCCcc-eeEEeecCCcEEEEeC--------CCCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecC-
Q psy952 84 RHDSHGLE-GLAVDWVGRKLYWLDR--------HSKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWN- 150 (573)
Q Consensus 84 ~~~~~~p~-glavD~~~~~LY~td~--------~~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~- 150 (573)
.+..|+ +.++-..+++||+.-. ..+.++++++....-+.+. .+..| .++++ .++.||+.-..
T Consensus 84 --~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~--~~~~iyv~GG~~ 158 (315)
T 4asc_A 84 --PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLPYVVYGHTVLS--HMDLVYVIGGKG 158 (315)
T ss_dssp --CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred --CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCCCcccceeEEE--ECCEEEEEeCCC
Confidence 222222 1122234789999743 1356889998765444433 22222 23333 36789988522
Q ss_pred C----cCeEEEEeccCCCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCc
Q psy952 151 L----QAYIGKIGMDGSNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKHIVISGQK 218 (573)
Q Consensus 151 ~----~~~I~r~~ldG~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~ 218 (573)
. ...+++.++....=+.+ ..+..|. ++++ .+++||+.-.. .+.++++++....=+.+.....
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 232 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKEL----APMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEEC----CCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS
T ss_pred CCCcccceEEEEeCCCCeEEEC----CCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC
Confidence 1 24688887764432222 2333332 3333 37899997432 2368888887654444332110
Q ss_pred cceeEEEeeeCCeEEEec
Q psy952 219 VPHVFALTLFEDHIYWTD 236 (573)
Q Consensus 219 ~~~p~~ia~~~~~lywtd 236 (573)
...-.++++.+++||+.-
T Consensus 233 ~r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 233 ERSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp CCBSCEEEEETTEEEEEE
T ss_pred cccceeEEEECCEEEEEC
Confidence 112235667788888874
No 429
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=75.32 E-value=55 Score=30.77 Aligned_cols=172 Identities=11% Similarity=0.094 Sum_probs=90.6
Q ss_pred ccEEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEECCC-----CeEEEEEcCCCcceEEEcCCCCCcc-eeEEe
Q psy952 25 YYVRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADVAA-----KTIYRSRVGSTEKERVIRHDSHGLE-GLAVD 96 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~i~~~~~~~p~-glavD 96 (573)
..+.++++.....+.+.. ....-.++++- +++||+.--.. ..++++++.....+.+.. +..|. +.+.-
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~p~~r~~~~~~ 152 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP--MNTRRSSVGVG 152 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC--CSSCCBSCEEE
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC--CCCcccCceEE
Confidence 357777776655443321 11111233332 68899875321 367888887655554422 22222 12222
Q ss_pred ecCCcEEEEeCC-------CCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecCC----cCeEEEEeccC
Q psy952 97 WVGRKLYWLDRH-------SKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWNL----QAYIGKIGMDG 162 (573)
Q Consensus 97 ~~~~~LY~td~~-------~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~~----~~~I~r~~ldG 162 (573)
..+++||+.-.. ...++++++....-+.+. .+..| .++++. ++.||+.-... ...+++.++..
T Consensus 153 ~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 153 VVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-EMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp EETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred EECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-CCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 357899997421 456899998765544443 22222 233333 57899885211 34688888765
Q ss_pred CCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCc
Q psy952 163 SNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKH 209 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~ 209 (573)
..=+.+ ..+..|. ++++ .+++||+.-.. ...|+.+++....
T Consensus 230 ~~W~~~----~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 230 NAWRQV----ADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TEEEEE----CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEeeC----CCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 433322 2232222 3333 37889987432 2457777776543
No 430
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=75.06 E-value=61 Score=31.18 Aligned_cols=198 Identities=10% Similarity=0.032 Sum_probs=102.8
Q ss_pred ceEEEEEEcCCCEEEEEECCCCeEEEEEcCC-CcceEEEcC-CC-CCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCce
Q psy952 46 NVVAMDFHYKENRFYFADVAAKTIYRSRVGS-TEKERVIRH-DS-HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNR 122 (573)
Q Consensus 46 ~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~i~~~-~~-~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~ 122 (573)
.+.+|+++. +.+|++. ..+.|++ ..|+ ...+.+... .+ ..+.+|++.. .+.+|.+.. .+.|++..-.|..-
T Consensus 81 ~~~~i~~~~--~~~~~~g-~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~S~DgG~tW 154 (327)
T 2xbg_A 81 RFNSVSFQG--NEGWIVG-EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMITN-VGAIYRTKDSGKNW 154 (327)
T ss_dssp EEEEEEEET--TEEEEEE-ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEET-TCCEEEESSTTSSE
T ss_pred cEEEEEecC--CeEEEEE-CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEeC-CccEEEEcCCCCCC
Confidence 467888884 6787764 3457777 4454 444433221 11 2455666643 466777653 45677654445444
Q ss_pred eEecc-CCCCcceEEEeCCCceEEEEecCCcCeEEEEecc-CCCcEEEEecCCCCCCCceEEEeccCCeEEEEeCCCCeE
Q psy952 123 KTLKT-AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-GSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYI 200 (573)
Q Consensus 123 ~~l~~-~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld-G~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~~~~~I 200 (573)
+.+.. ......+|++++. +.+|... ....|++..-+ |..-+.+. ...-.....|++++ +++||.+-. .+.|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~~~~~g--~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~-~g~~~~~~~-~G~~ 227 (327)
T 2xbg_A 155 QALVQEAIGVMRNLNRSPS-GEYVAVS--SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTP-DGRLWMIVN-GGKI 227 (327)
T ss_dssp EEEECSCCCCEEEEEECTT-SCEEEEE--TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECT-TSCEEEEET-TTEE
T ss_pred EEeecCCCcceEEEEEcCC-CcEEEEE--CCCcEEEEeCCCCCceeECC--CCCCCccceeEECC-CCCEEEEeC-CceE
Confidence 44332 2234578888884 5555443 24567777544 45444443 22223345777764 467776543 4566
Q ss_pred EEEeCCCCcE-EEEEeCC--ccceeEEEeee-CCeEEEecCCCCceEEEeccCCcceEEEcc
Q psy952 201 ASVDLDGKHK-HIVISGQ--KVPHVFALTLF-EDHIYWTDWNTKSINRADKFNGRDYRVLRN 258 (573)
Q Consensus 201 ~~~~~dG~~~-~~l~~~~--~~~~p~~ia~~-~~~lywtd~~~~~I~~~~~~~g~~~~~l~~ 258 (573)
++...|+... +.+.... .....++|++. ++.+|.+-. .+.|++. ...|+..+.+..
T Consensus 228 ~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~S-~DgG~tW~~~~~ 287 (327)
T 2xbg_A 228 AFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLCS-QDGGQTWQQDVD 287 (327)
T ss_dssp EEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEEE-SSTTSSCEECGG
T ss_pred EEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEEe-CCCCcccEEcCc
Confidence 6655553222 1111110 00124566654 456666543 4556554 345666665543
No 431
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=74.89 E-value=1.2 Score=38.73 Aligned_cols=31 Identities=39% Similarity=0.958 Sum_probs=25.2
Q ss_pred CccCCccccCCCCccccCCCCceecCCCccc
Q psy952 355 NQCGHKCVDTLTGYYCECNTGYKLLEDGKAC 385 (573)
Q Consensus 355 ~~C~~~C~~~~~~~~C~C~~~f~c~~~~~c~ 385 (573)
..|.+.|.+..+++.|.|..+|.+..+++.|
T Consensus 126 ~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C 156 (159)
T 1nzi_A 126 VPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 156 (159)
T ss_dssp CCSSSEEEEETTEEEEECCTTCEECTTSSCE
T ss_pred CCCCCcccCcCCCEEEecCCCcEECCCCCcc
Confidence 4577788899999999999999987665444
No 432
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=74.05 E-value=3.5 Score=34.87 Aligned_cols=41 Identities=34% Similarity=0.878 Sum_probs=28.4
Q ss_pred CccccCCCCCccCC--ccc-------cCCCCccccCCCCceecCCCcccccccccC
Q psy952 346 VDECAKVETNQCGH--KCV-------DTLTGYYCECNTGYKLLEDGKACTDIDECI 392 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~-------~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~ 392 (573)
+++|.. ..|.+ .|. +..+++.|.|+.+|. +..|..++++|.
T Consensus 52 ~~~C~~---~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~---G~~C~~~i~~C~ 101 (143)
T 4d90_A 52 AGPCTP---NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN---GIHCQHNINECE 101 (143)
T ss_dssp CCTTSS---CCCCTTCEEEECCCEETTEECCEEEECCTTEE---STTSCEECCTTT
T ss_pred CCcCCC---CCCCCCCEecCCCccccCCCCCeEeECcCCCc---CCCcccCCCcCC
Confidence 345543 45666 676 666889999999995 554655777776
No 433
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=73.66 E-value=77 Score=31.67 Aligned_cols=168 Identities=6% Similarity=-0.024 Sum_probs=86.9
Q ss_pred cceEEEEEEcCCCEEEEEECCCCeEEEEEcCCCc---------ce--EEEcCCCCCcceeEEeecCCcEEEEeCCCCeEE
Q psy952 45 LNVVAMDFHYKENRFYFADVAAKTIYRSRVGSTE---------KE--RVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLD 113 (573)
Q Consensus 45 ~~~~~v~~d~~~~~ly~~d~~~~~I~~~~~~g~~---------~~--~i~~~~~~~p~glavD~~~~~LY~td~~~~~I~ 113 (573)
..+..|++....+.||.+... .+..++++... .+ .++ .+..+..|++ .++.||++ ..+.|.
T Consensus 38 ~~~nlLais~~~gll~a~~~~--~l~v~~~~~l~~~~~~~~~~~~~~~~~--~lp~V~~l~f--d~~~L~v~--~~~~l~ 109 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS--KAVVGELQLLRDHITSDSTPLTFKWEK--EIPDVIFVCF--HGDQVLVS--TRNALY 109 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT--EEEEEEHHHHHHHHHSSSCCCCCSEEE--ECTTEEEEEE--ETTEEEEE--ESSEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC--EEEEEEhhHhhhhhccccccccceEEe--eCCCeeEEEE--CCCEEEEE--cCCcEE
Confidence 356788999888888877654 34445543211 11 222 2444999999 57888888 447899
Q ss_pred EEEcCCCceeEeccCCC-CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEeccCCeEEE
Q psy952 114 VAELDGTNRKTLKTAIQ-DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYW 192 (573)
Q Consensus 114 ~~~ldg~~~~~l~~~~~-~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~~~~~LYw 192 (573)
++++............. ....|..-+ ..+.... ..+.|...++.......+. . ....+++.+.+ +++
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~--p~~av~~--~dG~L~v~dl~~~~~~~~~---~---~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVN--NTLVILN--SVNDLSALDLRTKSTKQLA---Q---NVTSFDVTNSQ--LAV 177 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECS--SEEEEEE--TTSEEEEEETTTCCEEEEE---E---SEEEEEECSSE--EEE
T ss_pred EEEchhhhccCccceeecceeeEEecC--CCEEEEE--CCCCEEEEEccCCcccccc---C---CceEEEEcCCc--eEE
Confidence 99875433222111101 011211111 1122222 2345555555433322222 1 23567777554 333
Q ss_pred EeCCCCeEEEEeCCCCc---EEEEEe-----C--CccceeEEEeeeCCeEE
Q psy952 193 ADAHLDYIASVDLDGKH---KHIVIS-----G--QKVPHVFALTLFEDHIY 233 (573)
Q Consensus 193 ~D~~~~~I~~~~~dG~~---~~~l~~-----~--~~~~~p~~ia~~~~~ly 233 (573)
+ ...++|..+..++.. .++|.. . ..-.++.+|.+..+..|
T Consensus 178 g-~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 178 L-LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp E-ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred E-EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 3 345777777888777 334421 1 01356888888765443
No 434
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=73.21 E-value=1.7 Score=37.90 Aligned_cols=54 Identities=15% Similarity=0.173 Sum_probs=39.5
Q ss_pred cceee-ecc--ceeecCCCCC---CCcccCCccccCCCeeeec--ceeeCCcCCCCCCCCCC
Q psy952 288 TTVAD-MIR--SVYLGSGNKE---NSTCSSSQFRCNNGKCIDY--HLVCNKESDCEDDSDEP 341 (573)
Q Consensus 288 ~~~~C-Cp~--~~~l~~d~~~---~~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~sde~ 341 (573)
..|+| |+. +|.+..++.. +++|...+..|.++.|+.. +|+|...++.....|.+
T Consensus 98 ~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~ 159 (162)
T 1uzk_A 98 SEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTR 159 (162)
T ss_dssp HHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTC
T ss_pred CCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCC
Confidence 56889 987 8888765443 7889877777988899876 79997666665544443
No 435
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=72.14 E-value=1.9 Score=30.10 Aligned_cols=29 Identities=24% Similarity=0.698 Sum_probs=21.0
Q ss_pred CccccCCCCCccCC--cc-----ccCCCCccccCCCCce
Q psy952 346 VDECAKVETNQCGH--KC-----VDTLTGYYCECNTGYK 377 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C-----~~~~~~~~C~C~~~f~ 377 (573)
+++|.. .+|.+ +| .+..+.|.|.|+.+|.
T Consensus 8 ~~eC~s---~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~ 43 (55)
T 3u7u_G 8 CAEKEK---TFCVNGGECFMVKDLSNPSRYLCKCPNEFT 43 (55)
T ss_dssp CCSTTT---TTSCTTCEEEEECCC--CCCEEEEECTTEE
T ss_pred CCCCcC---CCCCCCCCcCCCCccCCCCCEeEeCCCCCc
Confidence 456654 67877 78 4677899999999996
No 436
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=71.05 E-value=70 Score=30.08 Aligned_cols=144 Identities=10% Similarity=0.033 Sum_probs=78.9
Q ss_pred cCCcEEEEeC----CCCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecC-----CcCeEEEEeccCCCc
Q psy952 98 VGRKLYWLDR----HSKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWN-----LQAYIGKIGMDGSNF 165 (573)
Q Consensus 98 ~~~~LY~td~----~~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~-----~~~~I~r~~ldG~~~ 165 (573)
.+++||+.-. ..+.++++++....-+.+.. +..| .++++. ++.||+.-.. ....+++.++....-
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG-PPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC-CSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC-CCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 4788888753 24678888887655444432 2222 223332 6789987421 134688887765433
Q ss_pred EEEEecCCCCCCCc---eEEEeccCCeEEEEeCC---------CCeEEEEeCCCCcEEEEEeCCccceeEEEeeeCCeEE
Q psy952 166 TRILTHEDDIAWPN---ALTLDYFTERLYWADAH---------LDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIY 233 (573)
Q Consensus 166 ~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~---------~~~I~~~~~dG~~~~~l~~~~~~~~p~~ia~~~~~ly 233 (573)
+.+ ..+..|. ++++ .+++||+.-.. .+.++++++....-+.+........-.++++.+++||
T Consensus 131 ~~~----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 204 (306)
T 3ii7_A 131 HTK----PSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIF 204 (306)
T ss_dssp EEE----CCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred EeC----CCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEE
Confidence 332 2232332 3333 37899997431 5678899887654444432110112245666788999
Q ss_pred EecCC-----CCceEEEeccCC
Q psy952 234 WTDWN-----TKSINRADKFNG 250 (573)
Q Consensus 234 wtd~~-----~~~I~~~~~~~g 250 (573)
+.-.. ...|++.+..+.
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTT
T ss_pred EEeCCCCCCCCceEEEeeCCCC
Confidence 87432 234566654433
No 437
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=70.43 E-value=3.1 Score=27.45 Aligned_cols=22 Identities=32% Similarity=0.854 Sum_probs=17.9
Q ss_pred ccCC--ccc--cCCCCccccCCCCce
Q psy952 356 QCGH--KCV--DTLTGYYCECNTGYK 377 (573)
Q Consensus 356 ~C~~--~C~--~~~~~~~C~C~~~f~ 377 (573)
+|.+ .|. +..+++.|.|+.+|.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~ 35 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYS 35 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCc
Confidence 5766 686 677899999999996
No 438
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=69.33 E-value=1.2e+02 Score=31.97 Aligned_cols=108 Identities=14% Similarity=0.281 Sum_probs=63.6
Q ss_pred EEEEEEcCCCEE--EE-EECC-----------CCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEEEEeCCC-CeE
Q psy952 48 VAMDFHYKENRF--YF-ADVA-----------AKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHS-KQL 112 (573)
Q Consensus 48 ~~v~~d~~~~~l--y~-~d~~-----------~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY~td~~~-~~I 112 (573)
.-.+||..+++| .| .|.. ++.+..+++||-....|+.. ++++|..+..||-+.... ..+
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G------s~~iD~dG~~L~st~~gHGDa~ 366 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG------SMAVDHDGKGMYSTGLGHGDAL 366 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET------TEEECTTSCEEEECSCCCCSCE
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe------eeEECCCCCEeeeCCCCCCCee
Confidence 345777778754 34 4542 25889999999766555532 257886554454444332 368
Q ss_pred EEEEcCCCc--eeEec--cCCCCcceEE-EeCCCceEEEEecC--CcCeEEEEecc
Q psy952 113 DVAELDGTN--RKTLK--TAIQDPRGIT-LHPGIGYVYFSSWN--LQAYIGKIGMD 161 (573)
Q Consensus 113 ~~~~ldg~~--~~~l~--~~~~~P~~Ia-vdp~~g~LYwtd~~--~~~~I~r~~ld 161 (573)
.+.+++... .+++. +.-..|.|.+ .|..+|.++|.-.. ...+-..+++|
T Consensus 367 hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Did 422 (591)
T 2zux_A 367 HTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADID 422 (591)
T ss_dssp EEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCC
T ss_pred EEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecC
Confidence 888887653 23433 3334566664 46678888887532 23444455444
No 439
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=68.89 E-value=5.4 Score=32.34 Aligned_cols=52 Identities=13% Similarity=0.120 Sum_probs=31.2
Q ss_pred cceee-eccceeecCCCCC--CCcccCCccccCCCeeeec--ceeeCCcCCCCCCCCC
Q psy952 288 TTVAD-MIRSVYLGSGNKE--NSTCSSSQFRCNNGKCIDY--HLVCNKESDCEDDSDE 340 (573)
Q Consensus 288 ~~~~C-Cp~~~~l~~d~~~--~~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~sde 340 (573)
.+|+| |+.||....-... ..+|......|.+ .|+.. +|+|...++.....+.
T Consensus 33 ~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g 89 (114)
T 1aut_L 33 GSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDL 89 (114)
T ss_dssp SCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTS
T ss_pred CCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCC
Confidence 57999 9999975432111 2367665555654 78765 7888655555433333
No 440
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=68.17 E-value=2.6 Score=35.51 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=21.4
Q ss_pred cccccccCccceee-eccceeecCCCCCC-CcccCCccccCCCeeeec--ceeeCCcCCCCCCCCCC
Q psy952 279 AWLTAHRGSTTVAD-MIRSVYLGSGNKEN-STCSSSQFRCNNGKCIDY--HLVCNKESDCEDDSDEP 341 (573)
Q Consensus 279 lCl~~~~~~~~~~C-Cp~~~~l~~d~~~~-~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~sde~ 341 (573)
.|+... .+|+| |+.||....-...+ +.|......|.+ .|++. +|.|...++.....+..
T Consensus 55 ~C~~~~---~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~ 117 (134)
T 2vh0_B 55 KCKDGL---GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGK 117 (134)
T ss_dssp -----------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSS
T ss_pred CcccCC---CCEEeeCCCCccCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCC
Confidence 566555 56999 99999743211113 568766666766 88765 68886655554333333
No 441
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=67.77 E-value=5.8 Score=39.50 Aligned_cols=135 Identities=14% Similarity=0.028 Sum_probs=50.1
Q ss_pred CCcEEEEeCCCCeEEEEEc-CCCceeEeccC-----CCCcceEEEeCCCceEEEEecCCcCeEEEEecc-CCCcEEEEec
Q psy952 99 GRKLYWLDRHSKQLDVAEL-DGTNRKTLKTA-----IQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-GSNFTRILTH 171 (573)
Q Consensus 99 ~~~LY~td~~~~~I~~~~l-dg~~~~~l~~~-----~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld-G~~~~~l~~~ 171 (573)
.+.+|++....+.|..+++ +|..+..+... ...| ++. ..+.||+.. ....|...+.. |..+-.+.
T Consensus 48 ~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp---~~~-~~~~v~~g~--~dg~v~a~D~~tG~~~w~~~-- 119 (369)
T 2hz6_A 48 EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP---CRS-SDGILYMGK--KQDIWYVIDLLTGEKQQTLS-- 119 (369)
T ss_dssp --CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS---CC------CCCCE--EEEEEEEECCC-----------
T ss_pred CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc---eEe-cCCEEEEEe--CCCEEEEEECCCCcEEEEec--
Confidence 3567777666778888877 45443222110 0112 111 135566543 13456666554 43322221
Q ss_pred CCCCCCCceEEEeccCCeEEEEeCCCCeEEEEeCC-CCcEEEEEeCCccceeEEEeeeC-----CeEEEecCCCCceEEE
Q psy952 172 EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKVPHVFALTLFE-----DHIYWTDWNTKSINRA 245 (573)
Q Consensus 172 ~~~l~~P~glaiD~~~~~LYw~D~~~~~I~~~~~d-G~~~~~l~~~~~~~~p~~ia~~~-----~~lywtd~~~~~I~~~ 245 (573)
. +....+.+.++.||++. ..+.|..++.. |..+..+.... ..+.++.+ +.||++.. .+.|+.+
T Consensus 120 ~-----~~~~~~~p~~~~v~~~~-~dg~v~a~d~~tG~~~W~~~~~~----~~~~~~~~~~~~~~~v~~~~~-dg~v~a~ 188 (369)
T 2hz6_A 120 S-----AFADSLSPSTSLLYLGR-TEYTITMYDTKTRELRWNATYFD----YAASLPEDDVDYKMSHFVSNG-DGLVVTV 188 (369)
T ss_dssp ------------------EEEEE-EEEEEECCCSSSSSCCCEEEEEE----ECCBCCCCCTTCCCCEEEEET-SCEEEEE
T ss_pred C-----CCcccccccCCEEEEEe-cCCEEEEEECCCCCEEEeEeccc----ccCccccCCccccceEEEECC-CCEEEEE
Confidence 0 11112223467777764 23456666653 43322211110 11122222 56776543 4667777
Q ss_pred eccCCcc
Q psy952 246 DKFNGRD 252 (573)
Q Consensus 246 ~~~~g~~ 252 (573)
+..+|+.
T Consensus 189 d~~tG~~ 195 (369)
T 2hz6_A 189 DSESGDV 195 (369)
T ss_dssp CTTTCCE
T ss_pred ECCCCcE
Confidence 7766654
No 442
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=66.86 E-value=0.73 Score=43.73 Aligned_cols=87 Identities=14% Similarity=-0.020 Sum_probs=51.1
Q ss_pred cceee-eccceeecCCCCCCCcccCCccccCCCeeeecceeeCCcCCCCCCCCCCCCCCCccccCCCCCccCC--ccccC
Q psy952 288 TTVAD-MIRSVYLGSGNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNVDECAKVETNQCGH--KCVDT 364 (573)
Q Consensus 288 ~~~~C-Cp~~~~l~~d~~~~~~C~~~~~~C~~g~Ci~~~~~cd~~~~c~d~sde~~~c~~~~C~~~~~~~C~~--~C~~~ 364 (573)
.+|+| ||.+|....-...+.+|. .+.-|.+.-|.+.. .|-....|.+ ..+|.. .+|.+ .|.++
T Consensus 51 ~~y~C~Cp~Gf~G~~Ce~ni~ec~-~~~~c~s~pC~ngg-tc~~G~~c~~---------~~eC~s---~pC~ngG~C~~~ 116 (267)
T 4fbr_A 51 MTYNGEGPIGFRGTLSSANNYTVE-NQWGGTSAPWQPGG-VWVLGARDKQ---------NIVAVS---IKSNDGGKTLTG 116 (267)
T ss_dssp EEETTSCCEEEEEEECSTTEEEEE-EESSSTTSCEEEEE-EEECCCCSSC---------CEEEEE---EECSSTTSEEEE
T ss_pred CCeEEeCCCCcccccccccccccc-cccCcCCCcccCCC-eeeccCcccc---------ccccCC---CCCCCCCEEecC
Confidence 68999 999998754333344432 12224555566642 1211112221 235654 56777 89999
Q ss_pred CCCccccCCCCceecCCCccccccccc
Q psy952 365 LTGYYCECNTGYKLLEDGKACTDIDEC 391 (573)
Q Consensus 365 ~~~~~C~C~~~f~c~~~~~c~~~~~~C 391 (573)
.++|.|.|+.+|+ +..|-.++++|
T Consensus 117 ~~sy~C~C~~Gf~---G~~Ce~~~d~C 140 (267)
T 4fbr_A 117 TTTYNGEGPIGFK---SEVTDGDTYSV 140 (267)
T ss_dssp EEEETTSCCEEEE---EEECCCCEEEE
T ss_pred CccEEeeCCCCcc---ccCCCCCcccc
Confidence 9999999999887 33344444444
No 443
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=66.77 E-value=94 Score=29.93 Aligned_cols=173 Identities=9% Similarity=0.047 Sum_probs=89.6
Q ss_pred CCEEEEEEC-CCCeEEEEEcCC--CcceEEEcCCCC-Ccc-eeEEeecCCcEEEEeCC----------CCeEEEEEcCCC
Q psy952 56 ENRFYFADV-AAKTIYRSRVGS--TEKERVIRHDSH-GLE-GLAVDWVGRKLYWLDRH----------SKQLDVAELDGT 120 (573)
Q Consensus 56 ~~~ly~~d~-~~~~I~~~~~~g--~~~~~i~~~~~~-~p~-glavD~~~~~LY~td~~----------~~~I~~~~ldg~ 120 (573)
+++||+.-- ....++++++.. ...+.+. .+. .|+ +.++-..+++||+.-.. .+.++++++...
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~--~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALA--AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECC--CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECC--CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 678888753 345788888863 2233222 222 221 22222357899986432 356888888765
Q ss_pred ceeEeccCCCCcc---eEEEeCCCceEEEEecCC--------------------------------------cCeEEEEe
Q psy952 121 NRKTLKTAIQDPR---GITLHPGIGYVYFSSWNL--------------------------------------QAYIGKIG 159 (573)
Q Consensus 121 ~~~~l~~~~~~P~---~Iavdp~~g~LYwtd~~~--------------------------------------~~~I~r~~ 159 (573)
.-+.+......|+ ++++ .++.||+.-... ...+++.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 5444432111222 2333 468899886321 24788888
Q ss_pred ccCCCcEEEEecCCCCC--CCceEEEeccCCeEEEEeC------CCCeEEEEeCCCCcEEEEEeCCcccee-----EEEe
Q psy952 160 MDGSNFTRILTHEDDIA--WPNALTLDYFTERLYWADA------HLDYIASVDLDGKHKHIVISGQKVPHV-----FALT 226 (573)
Q Consensus 160 ldG~~~~~l~~~~~~l~--~P~glaiD~~~~~LYw~D~------~~~~I~~~~~dG~~~~~l~~~~~~~~p-----~~ia 226 (573)
+....=+.+. ..... .-.++++ .+++||+.-. ....++.+++|-...+-..... ++.| .+++
T Consensus 175 ~~~~~W~~~~--~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~-~~~~~~~~~~~~~ 249 (357)
T 2uvk_A 175 PSTQQWSYAG--ESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP-VSSPDGVAGGFAG 249 (357)
T ss_dssp TTTTEEEEEE--ECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC-SSTTTCCBSCEEE
T ss_pred CCCCcEEECC--CCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC-CCCCcccccceEE
Confidence 7654433333 11111 1123444 4889999743 1456777877432222111111 2222 3467
Q ss_pred eeCCeEEEecC
Q psy952 227 LFEDHIYWTDW 237 (573)
Q Consensus 227 ~~~~~lywtd~ 237 (573)
+.+++||+.-.
T Consensus 250 ~~~~~iyv~GG 260 (357)
T 2uvk_A 250 ISNDSLIFAGG 260 (357)
T ss_dssp EETTEEEEECC
T ss_pred EECCEEEEEcC
Confidence 78899998743
No 444
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=65.78 E-value=88 Score=29.22 Aligned_cols=144 Identities=12% Similarity=0.127 Sum_probs=79.9
Q ss_pred cCCcEEEEeCC-----CCeEEEEEcCCCc---eeEeccCCCCc---ceEEEeCCCceEEEEecCC----cCeEEEEeccC
Q psy952 98 VGRKLYWLDRH-----SKQLDVAELDGTN---RKTLKTAIQDP---RGITLHPGIGYVYFSSWNL----QAYIGKIGMDG 162 (573)
Q Consensus 98 ~~~~LY~td~~-----~~~I~~~~ldg~~---~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~~----~~~I~r~~ldG 162 (573)
.+++||+.-.. .+.++++++.... -+.+.. +..| .++++. ++.||+.-... ...+++.++..
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~-~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP-MNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC-CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC-CCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCC
Confidence 46889887432 3578899987654 344432 2111 233333 57899885211 34688888765
Q ss_pred CCcEEEEecCCCCCCCceEEEeccCCeEEEEeC-----CCCeEEEEeCCCCcEEEEEeCCcccee---EEEeeeCCeEEE
Q psy952 163 SNFTRILTHEDDIAWPNALTLDYFTERLYWADA-----HLDYIASVDLDGKHKHIVISGQKVPHV---FALTLFEDHIYW 234 (573)
Q Consensus 163 ~~~~~l~~~~~~l~~P~glaiD~~~~~LYw~D~-----~~~~I~~~~~dG~~~~~l~~~~~~~~p---~~ia~~~~~lyw 234 (573)
..-+.+........ -.++++ .+++||+.-. ..+.++++++....-+.+.. ++.| .++++.+++||+
T Consensus 138 ~~W~~~~~~p~~r~-~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v 211 (301)
T 2vpj_A 138 DQWSMLGDMQTARE-GAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP---MATKRSGAGVALLNDHIYV 211 (301)
T ss_dssp TEEEEEEECSSCCB-SCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEE
T ss_pred CeEEECCCCCCCcc-cceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC---CCcccccceEEEECCEEEE
Confidence 54333331111111 123333 3789999743 24578999987655444422 2222 356677899998
Q ss_pred ecCC-----CCceEEEeccCC
Q psy952 235 TDWN-----TKSINRADKFNG 250 (573)
Q Consensus 235 td~~-----~~~I~~~~~~~g 250 (573)
.-.. ...|++.+..+.
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTT
T ss_pred EeCCCCCcccceEEEEeCCCC
Confidence 7443 345666665444
No 445
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=63.20 E-value=1.4 Score=42.14 Aligned_cols=40 Identities=30% Similarity=0.738 Sum_probs=29.2
Q ss_pred CccccCCCCCccCC--ccccCCCCccccCCCCceecCCCcccccc
Q psy952 346 VDECAKVETNQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDI 388 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~ 388 (573)
++||.. ....|.. .|.|+.++|.|.|..+|. .++. -|.++
T Consensus 5 iDEC~~-~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~-GnG~-~C~d~ 46 (285)
T 1gl4_A 5 QQTCAN-NRHQCSVHAECRDYATGFCCRCVANYT-GNGR-QCVAE 46 (285)
T ss_dssp --CHHH-HGGGSCTTEEEEECSSCEEEEECTTEE-ECSS-SEEET
T ss_pred chhccC-CCCCCCCCCEeEcCCCCeEEEcCCCCC-CCCC-cCCCC
Confidence 678876 5688976 799999999999999997 4444 34443
No 446
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=61.31 E-value=3.7 Score=35.00 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=35.6
Q ss_pred eee-eccceeecCCCCC---CCcccCCccccCCCeeeec--ceeeCCcCCCCCCCCC
Q psy952 290 VAD-MIRSVYLGSGNKE---NSTCSSSQFRCNNGKCIDY--HLVCNKESDCEDDSDE 340 (573)
Q Consensus 290 ~~C-Cp~~~~l~~d~~~---~~~C~~~~~~C~~g~Ci~~--~~~cd~~~~c~d~sde 340 (573)
++| |+.||.+. +++. +++|...+..|.++.|+.. +|+|...++.....+.
T Consensus 88 ~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~ 143 (147)
T 2w86_A 88 VDPICGKGYSRI-KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATG 143 (147)
T ss_dssp CCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTS
T ss_pred CcccCCCccccC-CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCC
Confidence 688 99999863 2332 7888877777888899875 7899766666544443
No 447
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=57.88 E-value=5.2 Score=38.30 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=25.2
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
++|+|.|.... .+|+| |+.||.+..+.++
T Consensus 11 ~~C~~~C~~~~---~~~~C~C~~G~~l~~d~~s 40 (283)
T 3f1s_B 11 DGCQHFCLPGQ---ESYTCSCAQGYRLGEDHKQ 40 (283)
T ss_dssp SSCSSBCCCCT---TSCCCBCCTTEEECTTSSC
T ss_pred CCCCCEeeCCC---CCeEecCCCCcccCCCCCc
Confidence 78999999877 67999 9999999887765
No 448
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=54.41 E-value=2.2e+02 Score=30.11 Aligned_cols=131 Identities=17% Similarity=0.225 Sum_probs=73.7
Q ss_pred EEEEEcCCCcceEEEcCCCCCc-ceeEEeecCCcE--EE-EeC-----------CCCeEEEEEcCCCceeEeccCCCCcc
Q psy952 69 IYRSRVGSTEKERVIRHDSHGL-EGLAVDWVGRKL--YW-LDR-----------HSKQLDVAELDGTNRKTLKTAIQDPR 133 (573)
Q Consensus 69 I~~~~~~g~~~~~i~~~~~~~p-~glavD~~~~~L--Y~-td~-----------~~~~I~~~~ldg~~~~~l~~~~~~P~ 133 (573)
+..+.|+|..++.++..+.... .-.|+||.+++| .| .+. ..+.+.++++||.-+..|+-+
T Consensus 274 ~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~G----- 348 (620)
T 2zuy_A 274 AGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYG----- 348 (620)
T ss_dssp EEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEET-----
T ss_pred eeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEe-----
Confidence 3445566665665555443222 234788888754 33 233 125789999998777666532
Q ss_pred eEEEeCCCceEEEE-ecCCcCeEEEEeccCC--CcEEEEecCCCCCCCceEE-EeccCCeEEEEeCC---CCeEEEEeCC
Q psy952 134 GITLHPGIGYVYFS-SWNLQAYIGKIGMDGS--NFTRILTHEDDIAWPNALT-LDYFTERLYWADAH---LDYIASVDLD 206 (573)
Q Consensus 134 ~Iavdp~~g~LYwt-d~~~~~~I~r~~ldG~--~~~~l~~~~~~l~~P~gla-iD~~~~~LYw~D~~---~~~I~~~~~d 206 (573)
+.++|. .|.+.|+ ..+....+...++|.. ..+++.- .+.-..|.|++ .|...++|+|.-.. .++-...+++
T Consensus 349 s~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~-~E~~~~~~G~~~~DA~tG~vlw~~~~~~D~Gr~~~~Did 426 (620)
T 2zuy_A 349 AMAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQV-HEDATKPYGLSLRDAGTGEILWGVHAGTDVGRGMAAHID 426 (620)
T ss_dssp TEEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEE-CCCTTSSCSEEEEETTTCCEEEEECCSSCCCEEEEECCC
T ss_pred eeEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEE-ecCCCCCCceEEEECCCCcEEEEecCcccCCceEEEecC
Confidence 247886 5555555 4444456777877755 3444432 23333455664 47767888876432 3444444544
No 449
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=53.52 E-value=2.2e+02 Score=29.91 Aligned_cols=131 Identities=15% Similarity=0.212 Sum_probs=75.8
Q ss_pred EEEEEcCCCcceEEEcCCC-CCcceeEEeecCCcE--EEE-eC-----------CCCeEEEEEcCCCceeEeccCCCCcc
Q psy952 69 IYRSRVGSTEKERVIRHDS-HGLEGLAVDWVGRKL--YWL-DR-----------HSKQLDVAELDGTNRKTLKTAIQDPR 133 (573)
Q Consensus 69 I~~~~~~g~~~~~i~~~~~-~~p~glavD~~~~~L--Y~t-d~-----------~~~~I~~~~ldg~~~~~l~~~~~~P~ 133 (573)
+-.+.++|..++.|+..+. .+-.-.|+|+.+++| .|. |. +.+.+.++++||.-+..|+-+
T Consensus 270 ~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G----- 344 (591)
T 2zux_A 270 AGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG----- 344 (591)
T ss_dssp EEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET-----
T ss_pred eeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe-----
Confidence 3445566665555554332 122346788888865 552 33 236889999998877666532
Q ss_pred eEEEeCCCceEEEEe-cCCcCeEEEEeccCCC--cEEEEecCCCCCCCceEE-EeccCCeEEEEeCC---CCeEEEEeCC
Q psy952 134 GITLHPGIGYVYFSS-WNLQAYIGKIGMDGSN--FTRILTHEDDIAWPNALT-LDYFTERLYWADAH---LDYIASVDLD 206 (573)
Q Consensus 134 ~Iavdp~~g~LYwtd-~~~~~~I~r~~ldG~~--~~~l~~~~~~l~~P~gla-iD~~~~~LYw~D~~---~~~I~~~~~d 206 (573)
+.++|. +|.+.|+. .+....+...++|... .+++.- .+.-..|.|.+ .|...++++|.-.. .++-...++|
T Consensus 345 s~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~-~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Did 422 (591)
T 2zux_A 345 SMAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQV-HEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADID 422 (591)
T ss_dssp TEEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEE-CCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCC
T ss_pred eeEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEE-ecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecC
Confidence 236787 55555554 3445578888888653 355442 33334455654 46677888876442 2444444444
No 450
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=53.11 E-value=1 Score=42.73 Aligned_cols=87 Identities=9% Similarity=0.001 Sum_probs=48.4
Q ss_pred cceee-eccceeecCCCCCCCcccCCccccCCCeeeecceeeCCcCCCCCCCCCCCCCCCcc-ccCCCCCccCC--cccc
Q psy952 288 TTVAD-MIRSVYLGSGNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNVDE-CAKVETNQCGH--KCVD 363 (573)
Q Consensus 288 ~~~~C-Cp~~~~l~~d~~~~~~C~~~~~~C~~g~Ci~~~~~cd~~~~c~d~sde~~~c~~~~-C~~~~~~~C~~--~C~~ 363 (573)
.+|+| ||.+|....-...+.+|... .-|.+.-|.+.. . |.++. .|.... |. ..+|.+ .|.+
T Consensus 118 ~sy~C~C~~Gf~G~~Ce~~~d~C~n~-~~c~s~pC~ngg-~------c~~G~----~c~~~i~c~---~~~c~ngg~C~d 182 (267)
T 4fbr_A 118 TTYNGEGPIGFKSEVTDGDTYSVENQ-WGGSAAPWHSGG-V------WVLGT----RGKQNVINV---DAKSNDGGKTLS 182 (267)
T ss_dssp EEETTSCCEEEEEEECCCCEEEEEEE-CSSTTSCCEEEE-E------EECCS----STTSCEEEE---EEECSSTTSEEE
T ss_pred ccEEeeCCCCccccCCCCCccccccc-CCcCCccccCCc-c------eeccc----ccccccccC---CCCCCCCCEeeC
Confidence 67999 99999875433323343221 112333333321 1 11111 122211 22 234666 8999
Q ss_pred CCCCccccCCCCceecCCCcccccccccC
Q psy952 364 TLTGYYCECNTGYKLLEDGKACTDIDECI 392 (573)
Q Consensus 364 ~~~~~~C~C~~~f~c~~~~~c~~~~~~C~ 392 (573)
+.++|+|.|+.+|+ +..|-.++++|.
T Consensus 183 g~~~y~C~Cp~Gf~---G~~c~~~i~ec~ 208 (267)
T 4fbr_A 183 GTMTYNGEGPIGFR---GTLTSPDTYTVE 208 (267)
T ss_dssp EEEEETTSCCEEEE---EEEEETTEEEEE
T ss_pred CCCCeEEeCCCCcc---ccccccccceec
Confidence 99999999999997 445666666664
No 451
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=52.68 E-value=4.1 Score=29.08 Aligned_cols=35 Identities=17% Similarity=0.634 Sum_probs=24.5
Q ss_pred CccCC--cccc-----CCCCccccCCCCceecCCCcccccccccC
Q psy952 355 NQCGH--KCVD-----TLTGYYCECNTGYKLLEDGKACTDIDECI 392 (573)
Q Consensus 355 ~~C~~--~C~~-----~~~~~~C~C~~~f~c~~~~~c~~~~~~C~ 392 (573)
.+|.+ .|.+ ..+.+.|.|+.+|. +..|-.++++|-
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~---G~~Ce~~i~~~~ 53 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFT---GARCTENVPMKV 53 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEE---STTSCEECCSSC
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCc---CCccCcCcCccc
Confidence 45666 6764 56789999999996 555655666554
No 452
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=51.68 E-value=1.6e+02 Score=27.64 Aligned_cols=174 Identities=14% Similarity=0.128 Sum_probs=90.7
Q ss_pred ccEEEEEcCCCceeeccc--CCcceEEEEEEcCCCEEEEEEC-----CCCeEEEEEcCCCcceEEEcCCCC-CcceeEEe
Q psy952 25 YYVRNMSLDATQYSLVHQ--DLLNVVAMDFHYKENRFYFADV-----AAKTIYRSRVGSTEKERVIRHDSH-GLEGLAVD 96 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~--~~~~~~~v~~d~~~~~ly~~d~-----~~~~I~~~~~~g~~~~~i~~~~~~-~p~glavD 96 (573)
..+.++++.....+.+.. ....-.++++- +++||+.-- ....++++++.....+.+...... .-.++++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 166 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV- 166 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-
Confidence 357777776655443321 11111233332 688999732 124688888876554433221111 1112333
Q ss_pred ecCCcEEEEeCC-----CCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecCC----cCeEEEEeccCCC
Q psy952 97 WVGRKLYWLDRH-----SKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWNL----QAYIGKIGMDGSN 164 (573)
Q Consensus 97 ~~~~~LY~td~~-----~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~~----~~~I~r~~ldG~~ 164 (573)
.+++||+.-.. .+.++++++....-+.+. .+..| .++++. ++.||+.-... ...|++.++....
T Consensus 167 -~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 167 -LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp -ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC-CCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 47899997421 457899998765544443 22222 233333 67899875211 3568888876543
Q ss_pred cEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEE
Q psy952 165 FTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKH 211 (573)
Q Consensus 165 ~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~ 211 (573)
=+.+ ..+..|. ++++ .+++||+.-.. ...|+.+++....=+
T Consensus 243 W~~~----~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 243 WTFV----APMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp EEEC----CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEC----CCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 2222 2333332 3333 36888887431 345666666554333
No 453
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=50.53 E-value=34 Score=37.12 Aligned_cols=83 Identities=17% Similarity=0.357 Sum_probs=44.9
Q ss_pred ccee---e-eccceeecCCCCC--------CCcccCCc--cccC-CCeeeecceeeCCcCCCCCCCCCCCCC--CCcccc
Q psy952 288 TTVA---D-MIRSVYLGSGNKE--------NSTCSSSQ--FRCN-NGKCIDYHLVCNKESDCEDDSDEPLHC--NVDECA 350 (573)
Q Consensus 288 ~~~~---C-Cp~~~~l~~d~~~--------~~~C~~~~--~~C~-~g~Ci~~~~~cd~~~~c~d~sde~~~c--~~~~C~ 350 (573)
+.+. | |+.||....-... ...|.... ..|. +|.|+...-.|..... .+-... .| +..+|.
T Consensus 453 G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~--~Gy~G~-~Ce~~~~~C~ 529 (690)
T 3fcs_B 453 GTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDF--GKITGK-YCECDDFSCV 529 (690)
T ss_dssp EEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSS--CCCBST-TSCBCSSCCC
T ss_pred CeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCC--CCeeCC-CcCcccCcCc
Confidence 3455 9 9999975442211 24576432 3473 6778865544441100 222222 33 355676
Q ss_pred CCCCCccCC--ccccCCCCccccCCCCce
Q psy952 351 KVETNQCGH--KCVDTLTGYYCECNTGYK 377 (573)
Q Consensus 351 ~~~~~~C~~--~C~~~~~~~~C~C~~~f~ 377 (573)
......|.+ .|.+ +.|.|..+|.
T Consensus 530 ~~~~~~C~~~G~C~~----g~C~C~~Gy~ 554 (690)
T 3fcs_B 530 RYKGEMCSGHGQCSC----GDCLCDSDWT 554 (690)
T ss_dssp BSSSSBGGGSEEEET----TEEEECTTEE
T ss_pred CCCCCCCCCCCEecC----CeeECcCCCc
Confidence 423346765 6755 6799998885
No 454
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=49.80 E-value=2.8e+02 Score=29.97 Aligned_cols=174 Identities=10% Similarity=0.026 Sum_probs=85.3
Q ss_pred ccEEEEEcCCCceeecccCCcceEEEEEEcCCC-EEEEEECCCCeEEEEEcCCCcceEEEcCCCCCcceeEEeecCCcEE
Q psy952 25 YYVRNMSLDATQYSLVHQDLLNVVAMDFHYKEN-RFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLY 103 (573)
Q Consensus 25 ~~I~~i~l~g~~~~~~~~~~~~~~~v~~d~~~~-~ly~~d~~~~~I~~~~~~g~~~~~i~~~~~~~p~glavD~~~~~LY 103 (573)
..|++-.=.|...+.+..+......|++++.+. .||+.. ..+.|++..-.|...+.+. .++. ...+.. .+.||
T Consensus 118 g~v~rS~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~-~~~gly~S~DgG~TW~~i~-~~v~---~~~f~~-~~~Iy 191 (685)
T 3f6k_A 118 GRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALS-TENGLWVSKNFGGKWEEIH-KAVC---LAKWGS-DNTIF 191 (685)
T ss_dssp CEEEEESSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEB-TTCCEEEESSTTSSEEEEE-SSEE---EEEECS-TTCEE
T ss_pred ceEEEECCCCceeEeccCCCCCceEEEEecCCCCEEEEEE-CCCCEEEEeCCCCCcEEee-cCcc---ccccCC-CCeEE
Confidence 455543333444544332222223688998664 455553 4567887554454555443 3322 223332 45688
Q ss_pred EEeCC-------CCeEE--EEEcCCCceeEeccCCCCcceEEEeCCCceEEEEecCC---cCeEEEEecc-CCCcEEEEe
Q psy952 104 WLDRH-------SKQLD--VAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL---QAYIGKIGMD-GSNFTRILT 170 (573)
Q Consensus 104 ~td~~-------~~~I~--~~~ldg~~~~~l~~~~~~P~~Iavdp~~g~LYwtd~~~---~~~I~r~~ld-G~~~~~l~~ 170 (573)
|.-.. .+.+. +.+-.|...+++... ..++++. ..+||++-... ...++ ++.| |..-....
T Consensus 192 ~~~~~~~~~~~~~g~l~L~~S~D~g~t~~~l~~~---i~~f~~~--~~yl~va~~~~~g~~~~l~-VS~D~G~tf~~a~- 264 (685)
T 3f6k_A 192 FTTYANGSCKADLGALELWRTSDLGKSFKTIGVK---IYSFGLG--GRFLFASVMADKDTTRRIH-VSTDQGDTWSMAQ- 264 (685)
T ss_dssp EEECSSSCTTTTTTSEEEEEESSTTSSCEEEEEE---EEEEEEE--TTEEEEEEECTTSSCEEEE-EESSTTSSCEECB-
T ss_pred EEeeccccccCCCCceEEEEecCCCCCceEeecc---ceeeeee--eeEEEEEEecCCCceEEEE-EECcCCcceeEee-
Confidence 87432 22222 222224444444332 3455554 67888875321 12344 4566 54332222
Q ss_pred cCCCCCCCceEE-EeccCCeEEEEeC-----CCCeEEEEeCCCCcEEE
Q psy952 171 HEDDIAWPNALT-LDYFTERLYWADA-----HLDYIASVDLDGKHKHI 212 (573)
Q Consensus 171 ~~~~l~~P~gla-iD~~~~~LYw~D~-----~~~~I~~~~~dG~~~~~ 212 (573)
......+..++ ++...+.||+.-. ..+.|+..+.+|..-..
T Consensus 265 -fP~~~~~~~ytIldss~~~Vfl~V~~~~~~~~G~Ly~Sds~Gt~F~~ 311 (685)
T 3f6k_A 265 -LPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSK 311 (685)
T ss_dssp -SCCBCTTCCEEEEEECSSCEEEEEECTTCCSEEEEEEECTTSCBEEE
T ss_pred -CCCcCccceEEEEcCCCCeEEEEEEccCCCceeEEEEeCCCCCEEEE
Confidence 22233445554 4556677776422 23468888888876554
No 455
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=48.62 E-value=5.1 Score=35.11 Aligned_cols=30 Identities=30% Similarity=0.851 Sum_probs=19.7
Q ss_pred CccccCCCCCccCC--ccccC-CCCccccCCCCce
Q psy952 346 VDECAKVETNQCGH--KCVDT-LTGYYCECNTGYK 377 (573)
Q Consensus 346 ~~~C~~~~~~~C~~--~C~~~-~~~~~C~C~~~f~ 377 (573)
+++|.. ...|.+ .|.+. .+++.|.|+.+|.
T Consensus 131 ~~~C~~--~~~C~~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 131 LNYCGT--HQPCLNGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp SCHHHH--TCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred CCCCCC--CCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence 455643 245765 67775 6778888887774
No 456
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=48.52 E-value=2.9e+02 Score=29.90 Aligned_cols=112 Identities=6% Similarity=-0.021 Sum_probs=64.2
Q ss_pred CCCEEEEEE----------CCCCeEEEEEcCCC--------cceEEEcCCC-CCcceeEEeecCCcEEEEeC--CCCeEE
Q psy952 55 KENRFYFAD----------VAAKTIYRSRVGST--------EKERVIRHDS-HGLEGLAVDWVGRKLYWLDR--HSKQLD 113 (573)
Q Consensus 55 ~~~~ly~~d----------~~~~~I~~~~~~g~--------~~~~i~~~~~-~~p~glavD~~~~~LY~td~--~~~~I~ 113 (573)
..++||+.- ..+++|.++++++. ..++++.... ..+.++ .|..+.||++-. ...+|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~~~~~~~l~ 375 (711)
T 4hvt_A 298 FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFI--STTKDRVFLATYDNVVAKVV 375 (711)
T ss_dssp ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEE--EECSSCEEEEEEETTEEEEE
T ss_pred ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEE--EEECCEEEEEEEECCEEEEE
Confidence 477888832 25678999998752 2344454432 234444 456778888754 334678
Q ss_pred EEEcCCC--ceeE-e-ccCCCCcceEEEeCCCceEEEEecC--CcCeEEEEeccCCCcEEEE
Q psy952 114 VAELDGT--NRKT-L-KTAIQDPRGITLHPGIGYVYFSSWN--LQAYIGKIGMDGSNFTRIL 169 (573)
Q Consensus 114 ~~~ldg~--~~~~-l-~~~~~~P~~Iavdp~~g~LYwtd~~--~~~~I~r~~ldG~~~~~l~ 169 (573)
++++.+. ..+. + +........+.+++..+.|+++-.+ ..+.|++.++. ...+.+.
T Consensus 376 ~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~ 436 (711)
T 4hvt_A 376 TFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIR 436 (711)
T ss_dssp EECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEE
T ss_pred EEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEe
Confidence 8887543 2233 2 1222233445555666667666433 46789999887 3344444
No 457
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=48.49 E-value=1.8e+02 Score=27.36 Aligned_cols=203 Identities=10% Similarity=0.090 Sum_probs=107.5
Q ss_pred EEEEEecccEEEEEcCCCceeecc-c--CCcceEEEEEEcCCCEEEEEECCC-----------CeEEEEEcCCCcceEEE
Q psy952 18 WLIFSNKYYVRNMSLDATQYSLVH-Q--DLLNVVAMDFHYKENRFYFADVAA-----------KTIYRSRVGSTEKERVI 83 (573)
Q Consensus 18 ~l~~s~~~~I~~i~l~g~~~~~~~-~--~~~~~~~v~~d~~~~~ly~~d~~~-----------~~I~~~~~~g~~~~~i~ 83 (573)
.|++-....+.++++......... . ....-.+++ ..+++||+.--.. ..++++++.....+.+.
T Consensus 17 ~i~~~GG~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDTAAVAYDPMENECYLTALAEQIPRNHSSIV--TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEEECTTSCSSEEEEE--CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhccccceEEECCCCCceecccCCccCCccceEEE--EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 444444556888888765543321 1 112223333 4578899876421 12778887655444332
Q ss_pred cCCCCCcc-eeEEeecCCcEEEEeCC-------CCeEEEEEcCCCceeEeccCCCCc---ceEEEeCCCceEEEEecC--
Q psy952 84 RHDSHGLE-GLAVDWVGRKLYWLDRH-------SKQLDVAELDGTNRKTLKTAIQDP---RGITLHPGIGYVYFSSWN-- 150 (573)
Q Consensus 84 ~~~~~~p~-glavD~~~~~LY~td~~-------~~~I~~~~ldg~~~~~l~~~~~~P---~~Iavdp~~g~LYwtd~~-- 150 (573)
.+..|+ +.++-..+++||+.-.. ...++++++....-+.+. .+..| .++++ .++.||+.-..
T Consensus 95 --~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~--~~~~iyv~GG~~~ 169 (318)
T 2woz_A 95 --PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVIS--HNGMIYCLGGKTD 169 (318)
T ss_dssp --CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEEE--ETTEEEEECCEES
T ss_pred --CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEEE--ECCEEEEEcCCCC
Confidence 222222 12222247899997431 246788888765544443 22222 23344 36889987521
Q ss_pred ---CcCeEEEEeccCCCcEEEEecCCCCCCCc---eEEEeccCCeEEEEeCC-----CCeEEEEeCCCCcEEEEEeCCcc
Q psy952 151 ---LQAYIGKIGMDGSNFTRILTHEDDIAWPN---ALTLDYFTERLYWADAH-----LDYIASVDLDGKHKHIVISGQKV 219 (573)
Q Consensus 151 ---~~~~I~r~~ldG~~~~~l~~~~~~l~~P~---glaiD~~~~~LYw~D~~-----~~~I~~~~~dG~~~~~l~~~~~~ 219 (573)
....+++.++....=+.+ ..+..|. ++++ .+++||+.-.. .+.|+++++....=+.+.. +
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~ 240 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDL----APMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE---F 240 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEE----CCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC---C
T ss_pred CCCccceEEEEcCCCCEEEEC----CCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCC---C
Confidence 134688888765432222 2233332 3443 37899997431 2467788877654443322 2
Q ss_pred cee---EEEeeeCCeEEEec
Q psy952 220 PHV---FALTLFEDHIYWTD 236 (573)
Q Consensus 220 ~~p---~~ia~~~~~lywtd 236 (573)
+.| .++++.+++||+.-
T Consensus 241 p~~r~~~~~~~~~~~i~v~G 260 (318)
T 2woz_A 241 PQERSSISLVSLAGSLYAIG 260 (318)
T ss_dssp SSCCBSCEEEEETTEEEEEC
T ss_pred CCcccceEEEEECCEEEEEC
Confidence 222 35667888888873
No 458
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=48.44 E-value=4.3 Score=27.00 Aligned_cols=30 Identities=30% Similarity=0.908 Sum_probs=19.8
Q ss_pred cccCCCCCccCC-ccccC--CCCccccCCCCce
Q psy952 348 ECAKVETNQCGH-KCVDT--LTGYYCECNTGYK 377 (573)
Q Consensus 348 ~C~~~~~~~C~~-~C~~~--~~~~~C~C~~~f~ 377 (573)
+|......+|.+ .|.+. .+++.|.|+.+|.
T Consensus 5 ~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt 37 (46)
T 1k36_A 5 KCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT 37 (46)
T ss_dssp CCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS
T ss_pred cCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc
Confidence 443323356777 78653 4689999998885
No 459
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=43.85 E-value=5.3 Score=28.43 Aligned_cols=29 Identities=45% Similarity=1.180 Sum_probs=22.0
Q ss_pred CccccCCCCCccCC----ccccCCCCccccCCCCce
Q psy952 346 VDECAKVETNQCGH----KCVDTLTGYYCECNTGYK 377 (573)
Q Consensus 346 ~~~C~~~~~~~C~~----~C~~~~~~~~C~C~~~f~ 377 (573)
+++|.. .+|.+ .|.+..++|.|.|+.+|.
T Consensus 11 ~d~C~s---nPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 11 PAACSS---NPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp CCHHHH---CSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred CCcCcC---CCCcCCCccccccCCCceEeECCCCCc
Confidence 356644 45664 588889999999999996
No 460
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=42.57 E-value=11 Score=32.87 Aligned_cols=27 Identities=7% Similarity=-0.092 Sum_probs=22.7
Q ss_pred ccccccccccCccceee-eccceeecCCCCC
Q psy952 276 TRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 276 Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
|+|.|...+ +++.| |+.||.|..++++
T Consensus 137 C~~~C~n~~---g~~~C~C~~Gy~l~~d~~~ 164 (170)
T 1szb_A 137 CDHHCHNHL---GGFYCSCRAGYVLHRNKRT 164 (170)
T ss_dssp SSSEEEEET---TEEEEECCTTEEECTTSSC
T ss_pred cCCccccCC---CCEEEeCCCCcEECCCCCc
Confidence 889998877 56999 9999999877654
No 461
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=42.35 E-value=12 Score=31.58 Aligned_cols=29 Identities=7% Similarity=-0.118 Sum_probs=24.0
Q ss_pred CcccccccccccCcc-ceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGST-TVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~-~~~C-Cp~~~~l~~d~~~ 305 (573)
++|.|.|+... + +|+| |+.||.+..+++.
T Consensus 96 ~~C~~~C~~~~---g~~y~C~C~~Gy~l~~dG~~ 126 (142)
T 2c4f_L 96 GGCEQYCSDHT---GTKRSCRCHEGYSLLADGVS 126 (142)
T ss_dssp GGCSSEEECCT---TSCCEEECCTTEEECTTSSC
T ss_pred CCccCEeECCC---CCCEEEECCCCceECCCCCC
Confidence 67888998877 4 7999 9999998877664
No 462
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=37.79 E-value=3.9e+02 Score=28.23 Aligned_cols=184 Identities=13% Similarity=0.132 Sum_probs=107.9
Q ss_pred EEEEEe--cccEEEEEcCCCcee--ecccCCcceEEEEEE--cCCCEEEEEECC------CCeE------------EEEE
Q psy952 18 WLIFSN--KYYVRNMSLDATQYS--LVHQDLLNVVAMDFH--YKENRFYFADVA------AKTI------------YRSR 73 (573)
Q Consensus 18 ~l~~s~--~~~I~~i~l~g~~~~--~~~~~~~~~~~v~~d--~~~~~ly~~d~~------~~~I------------~~~~ 73 (573)
||++-+ ..+|-||+|+--... +.+++...+.|+.+. +.+++||-.... .+++ ..++
T Consensus 144 ylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD 223 (638)
T 3sbq_A 144 YLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAID 223 (638)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEE
T ss_pred EEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEc
Confidence 454444 468999999876543 335677888999997 577777765321 1111 1122
Q ss_pred cCCCc--ceEEEcCCCCCcceeEEeecCCcEEEEeCC--------------CCeEEEEEc--------CCC-------ce
Q psy952 74 VGSTE--KERVIRHDSHGLEGLAVDWVGRKLYWLDRH--------------SKQLDVAEL--------DGT-------NR 122 (573)
Q Consensus 74 ~~g~~--~~~i~~~~~~~p~glavD~~~~~LY~td~~--------------~~~I~~~~l--------dg~-------~~ 122 (573)
.+... .++++ . ..+...+-|+.++..|+|-.. ...|.+++. +|. .+
T Consensus 224 ~~tm~v~~Qv~v-~--gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv 300 (638)
T 3sbq_A 224 AETMEMAFQVIV-D--GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKT 300 (638)
T ss_dssp TTTCSEEEEEEE-S--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCC
T ss_pred CCccEEEEEEEc-C--CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCe
Confidence 22111 12222 2 255666677777777777532 123555553 121 12
Q ss_pred eEe---------------ccCCCCcceEEEeCCCceEEEEecCCcCeEEEEecc-------C---CCcEEEEecCCCCCC
Q psy952 123 KTL---------------KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-------G---SNFTRILTHEDDIAW 177 (573)
Q Consensus 123 ~~l---------------~~~~~~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ld-------G---~~~~~l~~~~~~l~~ 177 (573)
.+| +....+|.|+-++|...++|++... .+++.+++.+ + .-+.+++...+.-..
T Consensus 301 ~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKL-sptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 301 PVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKL-SPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTT-SSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCC-CCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 222 1233569999999999999998843 5677777654 1 112223322334457
Q ss_pred CceEEEeccCCeEEEEeCCCCeEEEEeCC
Q psy952 178 PNALTLDYFTERLYWADAHLDYIASVDLD 206 (573)
Q Consensus 178 P~glaiD~~~~~LYw~D~~~~~I~~~~~d 206 (573)
|.-.++|. .+..|.+=.-...|.+-+++
T Consensus 380 PlHt~Fd~-~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 380 PLHTTFDG-RGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEEEEECS-SSEEEEEETTTTEEEEEEHH
T ss_pred ccEEEECC-CCceEeeeeecceEEEEecc
Confidence 88899996 45999887777777776654
No 463
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=37.30 E-value=10 Score=26.00 Aligned_cols=24 Identities=38% Similarity=0.957 Sum_probs=18.8
Q ss_pred CCccCC--ccc--cCCCCccccCCCCce
Q psy952 354 TNQCGH--KCV--DTLTGYYCECNTGYK 377 (573)
Q Consensus 354 ~~~C~~--~C~--~~~~~~~C~C~~~f~ 377 (573)
..+|.+ .|. +..+++.|.|+.+|.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~Gyt 38 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYI 38 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCc
Confidence 456766 686 677889999999986
No 464
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=36.93 E-value=8.3 Score=33.19 Aligned_cols=34 Identities=24% Similarity=0.738 Sum_probs=23.1
Q ss_pred CccCC--ccccCCCCccccCCCCceecCCCcccccccccC
Q psy952 355 NQCGH--KCVDTLTGYYCECNTGYKLLEDGKACTDIDECI 392 (573)
Q Consensus 355 ~~C~~--~C~~~~~~~~C~C~~~f~c~~~~~c~~~~~~C~ 392 (573)
.+|.+ .|.+..+++.|.|+.+|. +. -|....+|.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~---G~-~Ce~~~~c~ 160 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFY---GP-ECEYVRDDD 160 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEE---ST-TSCEECC--
T ss_pred CCCCCCCEEecCCCCceEeCCCCCc---Cc-ccccCcccC
Confidence 34554 788889999999999997 33 344445664
No 465
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=32.78 E-value=4.7e+02 Score=27.64 Aligned_cols=96 Identities=9% Similarity=-0.036 Sum_probs=52.0
Q ss_pred cEEEEEcCCCceeecc----cCCcceEEEEEEcCCCEEEEEEC-CCCeEEEEEcCCCcceEEEcCCCCCcc---eeEEee
Q psy952 26 YVRNMSLDATQYSLVH----QDLLNVVAMDFHYKENRFYFADV-AAKTIYRSRVGSTEKERVIRHDSHGLE---GLAVDW 97 (573)
Q Consensus 26 ~I~~i~l~g~~~~~~~----~~~~~~~~v~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~i~~~~~~~p~---glavD~ 97 (573)
.+.++++.....+.+. .......++++. .+++||++-- ....++++++.....+.+. .+..++ ++++-
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~--~~~~~R~~~s~~~~- 295 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMD-GNGQIVVTGGNDAKKTSLYDSSSDSWIPGP--DMQVARGYQSSATM- 295 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEEC-TTSCEEEECSSSTTCEEEEEGGGTEEEECC--CCSSCCSSCEEEEC-
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCC-CCCCEEEeCCCCCCceEEecCcCCceeECC--CCCccccccceEEe-
Confidence 4666776654432221 111122244544 4788998865 3457999998755444332 233332 22331
Q ss_pred cCCcEEEEeC-C-----CCeEEEEEcCCCceeEe
Q psy952 98 VGRKLYWLDR-H-----SKQLDVAELDGTNRKTL 125 (573)
Q Consensus 98 ~~~~LY~td~-~-----~~~I~~~~ldg~~~~~l 125 (573)
.+++||+.-. . ...++++++....-+.+
T Consensus 296 ~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 296 SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred cCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 2688999864 1 25789999876544444
No 466
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=32.59 E-value=20 Score=30.53 Aligned_cols=29 Identities=10% Similarity=-0.136 Sum_probs=23.2
Q ss_pred CcccccccccccCccceee-eccceeecCCCCC
Q psy952 274 GTTRHAWLTAHRGSTTVAD-MIRSVYLGSGNKE 305 (573)
Q Consensus 274 ~~Cs~lCl~~~~~~~~~~C-Cp~~~~l~~d~~~ 305 (573)
..|+|.|...+ ++++| |+.||.|..++++
T Consensus 126 ~~C~~~C~n~~---g~~~C~C~~Gy~l~~~~~~ 155 (159)
T 1nzi_A 126 VPCSHFCNNFI---GGYFCSCPPEYFLHDDMKN 155 (159)
T ss_dssp CCSSSEEEEET---TEEEEECCTTCEECTTSSC
T ss_pred CCCCCcccCcC---CCEEEecCCCcEECCCCCc
Confidence 46888888776 56999 9999999877653
No 467
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=28.04 E-value=7.4e+02 Score=28.51 Aligned_cols=130 Identities=8% Similarity=-0.046 Sum_probs=68.9
Q ss_pred CCCeEEEEEcCCCceeEecc-CCC-CcceEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEecCCCCCCCceEEEec
Q psy952 108 HSKQLDVAELDGTNRKTLKT-AIQ-DPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDY 185 (573)
Q Consensus 108 ~~~~I~~~~ldg~~~~~l~~-~~~-~P~~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~~~~~l~~P~glaiD~ 185 (573)
..|+|.++.+.+...+.+.. .+. -|.+|+- .+|+|..+- ..+|...++........- ...+.....+.+..
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~--~~g~Lla~i---g~~l~vy~l~~~~~L~~~--~~~~~~i~~~~l~~ 934 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVE--FNGKLLASI---NSTVRLYEWTTEKELRTE--CNHYNNIMALYLKT 934 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEE--ETTEEEEEE---TTEEEEEEECTTSCEEEE--EEECCCSCEEEEEE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEee--eCCEEEEEc---CCEEEEEECCCCceEEEE--eeccccEEEEEEec
Confidence 45788888876444444432 222 2555543 467777665 345555555433211111 11111112334555
Q ss_pred cCCeEEEEeCCCC-eEEEEeCCCCcEEEEEeCCccceeEEEee-eCCeEEEecCCCCceEEE
Q psy952 186 FTERLYWADAHLD-YIASVDLDGKHKHIVISGQKVPHVFALTL-FEDHIYWTDWNTKSINRA 245 (573)
Q Consensus 186 ~~~~LYw~D~~~~-~I~~~~~dG~~~~~l~~~~~~~~p~~ia~-~~~~lywtd~~~~~I~~~ 245 (573)
.+++|+++|...+ .+.+++........+.......+..++.+ ..+.+..+|.. +.|+..
T Consensus 935 ~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~-gNl~vl 995 (1158)
T 3ei3_A 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENA-FNLFVC 995 (1158)
T ss_dssp ETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETT-SEEEEE
T ss_pred cCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCC-CcEEEE
Confidence 6899999998776 34455665555566665432334556665 46677777754 334433
No 468
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=22.77 E-value=7.2e+02 Score=26.53 Aligned_cols=196 Identities=8% Similarity=-0.020 Sum_probs=0.0
Q ss_pred CCEEEEEEC----CCCeEEEEEcCCCcceEEE-c---CCCCCcc-eeEEeec--CCcEEEEeC------CCCeEEEEEcC
Q psy952 56 ENRFYFADV----AAKTIYRSRVGSTEKERVI-R---HDSHGLE-GLAVDWV--GRKLYWLDR------HSKQLDVAELD 118 (573)
Q Consensus 56 ~~~ly~~d~----~~~~I~~~~~~g~~~~~i~-~---~~~~~p~-glavD~~--~~~LY~td~------~~~~I~~~~ld 118 (573)
+++||+.-- ....++++++.....+.+. . ..+..|+ +-+.-.. +++||+.-. ..+.++++++.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Q ss_pred CCceeEeccCCCCcceEEEeCC-CceEEEEecCCcCe-EEEEeccCCCcEEEEe---cCCCCCCCceEEEeccCCeEEEE
Q psy952 119 GTNRKTLKTAIQDPRGITLHPG-IGYVYFSSWNLQAY-IGKIGMDGSNFTRILT---HEDDIAWPNALTLDYFTERLYWA 193 (573)
Q Consensus 119 g~~~~~l~~~~~~P~~Iavdp~-~g~LYwtd~~~~~~-I~r~~ldG~~~~~l~~---~~~~l~~P~glaiD~~~~~LYw~ 193 (573)
...-+.+..-...-.+-+.-.. ++.||+.-...... +++.++....=+.+.. .........+++++...++||+.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Q ss_pred eCC-------CCeEEEEeCCCCc------EEEEEeC-CccceeEEEeeeC-CeEEEecC--------CCCceEEEeccCC
Q psy952 194 DAH-------LDYIASVDLDGKH------KHIVISG-QKVPHVFALTLFE-DHIYWTDW--------NTKSINRADKFNG 250 (573)
Q Consensus 194 D~~-------~~~I~~~~~dG~~------~~~l~~~-~~~~~p~~ia~~~-~~lywtd~--------~~~~I~~~~~~~g 250 (573)
-.. .+.|+++++.... -+.+... ..-..-.++++.+ ++||+.-. ....|+..+..+.
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Q ss_pred c
Q psy952 251 R 251 (573)
Q Consensus 251 ~ 251 (573)
+
T Consensus 637 ~ 637 (695)
T 2zwa_A 637 T 637 (695)
T ss_dssp E
T ss_pred e
No 469
>3gr5_A ESCC; secretin, type III secretion system, outer membrane, transport, membrane protein; 2.05A {Escherichia coli}
Probab=22.33 E-value=68 Score=27.41 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=42.4
Q ss_pred CCCcceeEEeecCCcEEEEeCCCCeEEEEEcCCCceeEec-----cCCCCcce--EEEeCCCceEEEEec
Q psy952 87 SHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLK-----TAIQDPRG--ITLHPGIGYVYFSSW 149 (573)
Q Consensus 87 ~~~p~glavD~~~~~LY~td~~~~~I~~~~ldg~~~~~l~-----~~~~~P~~--Iavdp~~g~LYwtd~ 149 (573)
+....||..-+.++.||+.....-+-.++.+.......+. .++..|++ +.+|+.++.||+++.
T Consensus 66 l~~~~gL~~~~dG~vl~V~~~~e~~t~~i~l~~a~a~~l~~~L~~~~ll~~r~~~v~~d~~tn~l~Vsg~ 135 (156)
T 3gr5_A 66 LSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGV 135 (156)
T ss_dssp HHHHHTEEEEECSSCEEEEEGGGCEEEEECCSSSCHHHHHHHHTTSSCCEETTEEEEECSSTTCEEEEEC
T ss_pred HHHHCCceEEEECCEEEEEchHHhEEEEEEecCCCHHHHHHHHHhcCCccCCCCeEEEeCCCCEEEEEcC
Confidence 3456788887788889988765434445555544433332 24556775 999999999999983
No 470
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=21.47 E-value=7.2e+02 Score=26.08 Aligned_cols=102 Identities=9% Similarity=-0.056 Sum_probs=54.9
Q ss_pred eEEEEEEcCCCEEEEEECCC--------C---eEEEEEcCCCcceEEEcCCCCCcce--eEEeecCCcEEEEeCC-----
Q psy952 47 VVAMDFHYKENRFYFADVAA--------K---TIYRSRVGSTEKERVIRHDSHGLEG--LAVDWVGRKLYWLDRH----- 108 (573)
Q Consensus 47 ~~~v~~d~~~~~ly~~d~~~--------~---~I~~~~~~g~~~~~i~~~~~~~p~g--lavD~~~~~LY~td~~----- 108 (573)
..++.|+..+++||+.--.. . .|..+++.......+....+..++. -++-..+++||+.-..
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC
Confidence 35677777789999985421 2 4555555544443333123333332 1122237889998642
Q ss_pred ------CCeEEEEEcCCCceeEeccCCCCcc---eEEEeCCCceEEEEec
Q psy952 109 ------SKQLDVAELDGTNRKTLKTAIQDPR---GITLHPGIGYVYFSSW 149 (573)
Q Consensus 109 ------~~~I~~~~ldg~~~~~l~~~~~~P~---~Iavdp~~g~LYwtd~ 149 (573)
...++++++....-+.+ ..+..|+ +.++-...|.||+.-.
T Consensus 481 ~~~~~~~~~v~~ydp~t~~W~~~-~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 481 FEDSTPVFTPEIYVPEQDTFYKQ-NPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp TCCCSBCCCCEEEEGGGTEEEEC-CCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred cCCCCcccceEEEcCCCCceeec-CCCCCccccccHhhcCCCcEEEecCC
Confidence 24678888765443333 2233333 4454433677888753
No 471
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=21.24 E-value=5.9e+02 Score=24.93 Aligned_cols=142 Identities=8% Similarity=0.086 Sum_probs=79.8
Q ss_pred cEEEEeCCCC--eEEEEEcCCCcee-Eec------cCCCCcc-eEEEeCCCceEEEEecCCcCeEEEEeccCCCcEEEEe
Q psy952 101 KLYWLDRHSK--QLDVAELDGTNRK-TLK------TAIQDPR-GITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 170 (573)
Q Consensus 101 ~LY~td~~~~--~I~~~~ldg~~~~-~l~------~~~~~P~-~Iavdp~~g~LYwtd~~~~~~I~r~~ldG~~~~~l~~ 170 (573)
.||..+...+ .|.+++|+..... .+. .++..+. ++-+. ....||+++.. ..+|.+++..|.....+--
T Consensus 41 yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~-~~DsI~i~~~~-~~~i~l~n~~G~~~~k~~~ 118 (369)
T 3s9j_A 41 YLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSP-DSQYILVAQNN-ISRLSSINSQGEIIRNYNF 118 (369)
T ss_dssp EEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESS-STTSEEEEEGG-GTEEEEECTTCCEEEEEEC
T ss_pred EEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEec-CCCEEEEEeCC-cceEEEECCCceEEEEEec
Confidence 5777888777 9999999866543 332 1344453 34443 36788888753 5689999999987776541
Q ss_pred cCCCC--C-------CCceEEEeccCCeEEEEeCC------------CCeEEEEeCCCCcEEEEEe--CC----------
Q psy952 171 HEDDI--A-------WPNALTLDYFTERLYWADAH------------LDYIASVDLDGKHKHIVIS--GQ---------- 217 (573)
Q Consensus 171 ~~~~l--~-------~P~glaiD~~~~~LYw~D~~------------~~~I~~~~~dG~~~~~l~~--~~---------- 217 (573)
....+ . .-..+.+. ++.||++... ...+..+++.-...+.+.- ..
T Consensus 119 ~~~~~~~~~~~~~~~~~~p~~~~--~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~~~~~l~l~yP~~~~~~~~~~~ 196 (369)
T 3s9j_A 119 QTPEGRFTPLSFGSYYNAPAFIK--DSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTGEVKWIPIFYPPIFKEEYDNIA 196 (369)
T ss_dssp CCTTSCCCCCCCBTTTTBCCEEE--TTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTCCEEEEEEECCSCCCCCCSSEE
T ss_pred CCCccccccccccccccCcceec--CceEEEeccccccccchhhhccCceEEEEECCCCcEEEeeccCCccccccccccc
Confidence 01111 1 00111111 3457775331 1245666666555553321 10
Q ss_pred -ccceeEEEeeeCCeEEEecCCCCceEEEe
Q psy952 218 -KVPHVFALTLFEDHIYWTDWNTKSINRAD 246 (573)
Q Consensus 218 -~~~~p~~ia~~~~~lywtd~~~~~I~~~~ 246 (573)
....-+.+...+++|+++=+....|++.+
T Consensus 197 ~~~~~~~s~~~~~~~~Iis~~~~dsIyv~~ 226 (369)
T 3s9j_A 197 GGYGFSYDYNYKESRLVCGFFGYDSLMVTD 226 (369)
T ss_dssp ECCCEEEEEETTTTEEEEEETTCSEEEEES
T ss_pred CCccceeEEEEECCEEEEEeccCCeEEEEc
Confidence 01111233345778888877788887665
No 472
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=20.99 E-value=4.7e+02 Score=25.08 Aligned_cols=52 Identities=15% Similarity=0.280 Sum_probs=33.2
Q ss_pred cCCeEEEEeCCCCeEEEEeCCCCcEEEEEe-CCccceeEE-----EeeeCCeEEEecCC
Q psy952 186 FTERLYWADAHLDYIASVDLDGKHKHIVIS-GQKVPHVFA-----LTLFEDHIYWTDWN 238 (573)
Q Consensus 186 ~~~~LYw~D~~~~~I~~~~~dG~~~~~l~~-~~~~~~p~~-----ia~~~~~lywtd~~ 238 (573)
.+++||-.|..++.|+.+.-+..-..+|+. +. -....| ++|-++.||+--.+
T Consensus 103 FngkLyt~DDRTGiVyei~~~~~iPwvIL~dGd-G~~~kGfK~EWaTVKd~~LyVGs~G 160 (331)
T 1s1d_A 103 FNGKLYSVDDRTGVVYQIEGSKAVPWVILSDGD-GTVEKGFKAEWLAVKDERLYVGGLG 160 (331)
T ss_dssp ETTEEEEEETTTCEEEEEETTEEEEEEECEETT-TTEEEECCCCEEEEETTEEEEECCC
T ss_pred ECCEEeeeeCCCceEEEEeCCcEEEEEEEecCC-CCcCcccceeeEEEECCEEEEeecC
Confidence 589999999999999998622222233433 32 223333 56788999987443
Done!