RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy952
(573 letters)
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 211 bits (538), Expect = 4e-65
Identities = 84/263 (31%), Positives = 147/263 (55%), Gaps = 8/263 (3%)
Query: 17 PWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRSRV-- 74
+L F+N++ VR M+LD ++Y+ + +L NVVA+D NR Y++D++ + I +++
Sbjct: 2 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 61
Query: 75 --GSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTN-RKTLKTAIQD 131
G + + VI D +GLAVDW+ +YW D + VA+ G + +
Sbjct: 62 AHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 121
Query: 132 PRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLY 191
PR I + P G++Y++ W A I K G++G + ++I WPN +TLD + RLY
Sbjct: 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENIQWPNGITLDLLSGRLY 179
Query: 192 WADAHLDYIASVDLDGKHKHIVISGQK-VPHVFALTLFEDHIYWTDWNTKSINRADKFNG 250
W D+ L I+S+D++G ++ ++ +K + H F+L +FED ++WTD ++I A++ G
Sbjct: 180 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239
Query: 251 RDYRVLRNTTHRPYDIHVYHPLK 273
D +L P D+ ++H L
Sbjct: 240 SDVNLLAENLLSPEDMVLFHNLT 262
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 199 bits (507), Expect = 1e-60
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 13/263 (4%)
Query: 18 WLIFSNKYYVRNMSLDATQYS------LVHQDLLNVVAMDFHYKENRFYFADVAAKTIYR 71
L+F+ + + L+ +H ++ + F + Y+ D++ +I R
Sbjct: 3 HLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGR 62
Query: 72 SRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTL-KTAIQ 130
+ + E +IR D EG+A+D +GR ++W D +++VA++DGT R+ L T +
Sbjct: 63 ASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV 122
Query: 131 DPRGITLHPGIGYVYFSSWNL-QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTER 189
+PRGI P G +Y++ WN I MDG+N R + +D++ PN LT D F+ +
Sbjct: 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN--RRILAQDNLGLPNGLTFDAFSSQ 180
Query: 190 LYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFN 249
L W DA ++ + V+ G + + FA+T + ++Y+TDW T S+ D
Sbjct: 181 LCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238
Query: 250 GRDYRVL-RNTTHRPYDIHVYHP 271
++ + R Y I +
Sbjct: 239 SKEMDTFHPHKQTRLYGITIALS 261
>d1xfea2 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 57.1 bits (138), Expect = 2e-11
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 410 CDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 447
C+ +F C +G CI VC+ DC D SDEP C
Sbjct: 6 CEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 45.9 bits (109), Expect = 1e-07
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 307 STCSS-SQFRCNNGKCIDYHLVCNKESDCEDDSDEPLH 343
+ C ++F+C++G+CI VCN DC D SDEP+
Sbjct: 4 TLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 44.4 bits (105), Expect = 4e-07
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 525 CPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHC 562
P+ KC + C+ +C+ DC D SDE C
Sbjct: 7 EGPNKFKCHSGE-CITLDKVCNMARDCRDWSDEPIKEC 43
Score = 44.4 bits (105), Expect = 5e-07
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 464 NYRCIPKWLFCDGKDDCRDGSDELPQNC 491
+ CI C+ DCRD SDE + C
Sbjct: 16 SGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 27.1 bits (60), Expect = 0.68
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Query: 499 VCNGVNDCKDNITSDETHARC 519
VCN DC+D SDE C
Sbjct: 25 VCNMARDCRDW--SDEPIKEC 43
>d1d2la_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 54.8 bits (132), Expect = 9e-11
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 408 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQ 449
C EFAC N CI + W CD DNDC D+SDE +C Q
Sbjct: 4 PQCQPG-EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQ 44
Score = 49.0 bits (117), Expect = 1e-08
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 524 TCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQ 564
C P CAN+ C++ W CDGDNDC D SDE P C Q
Sbjct: 5 QCQPGEFACANSR-CIQERWKCDGDNDCLDNSDEAPALCHQ 44
Score = 48.2 bits (115), Expect = 2e-08
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 308 TCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEP 341
C +F C N +CI C+ ++DC D+SDE
Sbjct: 5 QCQPGEFACANSRCIQERWKCDGDNDCLDNSDEA 38
Score = 47.5 bits (113), Expect = 4e-08
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 450 RNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCP 492
C G C N RCI + CDG +DC D SDE P C
Sbjct: 4 PQCQPGEFAC---ANSRCIQERWKCDGDNDCLDNSDEAPALCH 43
>d1j8ea_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 53.2 bits (128), Expect = 3e-10
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 407 NRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQR 450
+ C +F C +G CIP+ W CD DNDCGD SDE C +
Sbjct: 2 SHSCSST-QFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQ 44
Score = 49.8 bits (119), Expect = 5e-09
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 306 NSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEP 341
+ +CSS+QF+CN+G+CI H C+ ++DC D SDE
Sbjct: 2 SHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDET 37
Score = 48.2 bits (115), Expect = 2e-08
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 522 NITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHCQQR 565
+ +C KC + C+ +W CDGDNDCGD SDE +C +
Sbjct: 2 SHSCSSTQFKCNSGR-CIPEHWTCDGDNDCGDYSDETHANCTNQ 44
Score = 45.9 bits (109), Expect = 1e-07
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 449 QRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCP 492
+C+ +C + RCIP+ CDG +DC D SDE NC
Sbjct: 2 SHSCSSTQFKC---NSGRCIPEHWTCDGDNDCGDYSDETHANCT 42
>d2fcwb2 g.12.1.1 (B:125-163) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 51.3 bits (123), Expect = 2e-09
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 413 DTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 447
F C + CIP+LW CD D DC D SDE C
Sbjct: 5 PASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 49.8 bits (119), Expect = 4e-09
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 523 ITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHC 562
+TC P +C ++ C+ W CD D DC D SDE P C
Sbjct: 1 LTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 49.0 bits (117), Expect = 8e-09
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 308 TCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEP 341
TC + F+CN+ CI C+ + DCED SDE
Sbjct: 2 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEW 35
Score = 45.2 bits (107), Expect = 2e-07
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 452 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
C +C + CIP+ CD DC DGSDE PQ C
Sbjct: 3 CGPASFQC---NSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 50.5 bits (121), Expect = 2e-09
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDI 388
+DEC + + C CV+ GY C+C G++L KAC +
Sbjct: 1 IDECQ--DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41
>d1f8za_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 50.5 bits (121), Expect = 3e-09
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 307 STCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDE 340
+TC +F+C++G CI C++E DC+D SDE
Sbjct: 1 ATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 34
Score = 48.2 bits (115), Expect = 2e-08
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 412 KDTEFACRNGHCIPKLWVCDFDNDCGDDSDE 442
+ EF C +G+CI CD + DC D SDE
Sbjct: 4 RPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 34
Score = 43.9 bits (104), Expect = 6e-07
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 524 TCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDE 557
TC P +C++ N C+ CD + DC DMSDE
Sbjct: 2 TCRPDEFQCSDGN-CIHGSRQCDREYDCKDMSDE 34
Score = 40.5 bits (95), Expect = 9e-06
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 451 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
C +C ++ CI CD + DC+D SDE C
Sbjct: 2 TCRPDEFQC---SDGNCIHGSRQCDREYDCKDMSDE--VGC 37
>d1f5ya1 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 50.2 bits (120), Expect = 4e-09
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 302 GNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDE 340
G+ C ++F+C +GKCI Y VC+ ++C+D SDE
Sbjct: 1 GSAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDE 39
Score = 50.2 bits (120), Expect = 4e-09
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 405 CHNRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 447
C+++ EF C++G CI WVCD +C D SDE C
Sbjct: 3 AVGDRCERN-EFQCQDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 46.0 bits (109), Expect = 1e-07
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 519 CPSNITCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDEDPLHC 562
C + +C + C+ W+CDG +C D SDE C
Sbjct: 2 SAVGDRCERNEFQCQDGK-CISYKWVCDGSAECQDGSDESQETC 44
Score = 43.3 bits (102), Expect = 1e-06
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 447 CRQRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
C + +C + +CI CDG +C+DGSDE + C
Sbjct: 3 AVGDRCERNEFQC---QDGKCISYKWVCDGSAECQDGSDESQETC 44
>d1ajja_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 37
Score = 49.7 bits (119), Expect = 5e-09
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 409 PCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDE 442
PC EF C +G CI W CD DC D SDE
Sbjct: 1 PCSAF-EFHCLSGECIHSSWRCDGGPDCKDKSDE 33
Score = 46.7 bits (111), Expect = 5e-08
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 309 CSSSQFRCNNGKCIDYHLVCNKESDCEDDSDE 340
CS+ +F C +G+CI C+ DC+D SDE
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDE 33
Score = 41.3 bits (97), Expect = 5e-06
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 525 CPPHHLKCANTNICVEPYWLCDGDNDCGDMSDED 558
C C + C+ W CDG DC D SDE+
Sbjct: 2 CSAFEFHCLSGE-CIHSSWRCDGGPDCKDKSDEE 34
Score = 39.7 bits (93), Expect = 2e-05
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 452 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
C+ C + CI CDG DC+D SDE +NC
Sbjct: 2 CSAFEFHC---LSGECIHSSWRCDGGPDCKDKSDE--ENC 36
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 49.7 bits (119), Expect = 6e-09
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 408 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDE 442
+ C + EF C +G CI + +VCD D DC D SDE
Sbjct: 1 KTCSQA-EFRCHDGKCISRQFVCDSDRDCLDGSDE 34
Score = 49.3 bits (118), Expect = 6e-09
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 308 TCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNV 346
TCS ++FRC++GKCI VC+ + DC D SDE C V
Sbjct: 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDE-ASCPV 39
Score = 45.5 bits (108), Expect = 2e-07
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 450 RNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPL 493
+ C++ RC + +CI + CD DC DGSDE +CP+
Sbjct: 1 KTCSQAEFRC---HDGKCISRQFVCDSDRDCLDGSDE--ASCPV 39
Score = 44.3 bits (105), Expect = 5e-07
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 524 TCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDED 558
TC +C + C+ ++CD D DC D SDE
Sbjct: 2 TCSQAEFRCHDGK-CISRQFVCDSDRDCLDGSDEA 35
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 48.7 bits (116), Expect = 1e-08
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 347 DECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACT 386
+EC C H C + + GY+C C Y L +D K C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 40
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 48.7 bits (116), Expect = 2e-08
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 346 VDECAKVETNQ--CGHKCVDTLTGYYCECNTGYKLLEDGKACTD 387
+DEC C H C + L G+YC C GY L + + C++
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 47.5 bits (113), Expect = 4e-08
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKAC 385
+DEC ++ G KC++T + C C TGY L ED + C
Sbjct: 3 IDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 24.7 bits (54), Expect = 4.3
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Query: 387 DIDECIEQPGVCSQYPAMCHNRP 409
DIDEC E PG+C C N
Sbjct: 2 DIDECQELPGLCQG--GKCINTF 22
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 47.5 bits (113), Expect = 5e-08
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 352 VETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391
++ C C + + C C GY L +D K+C +
Sbjct: 3 LDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 46.3 bits (110), Expect = 8e-08
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 524 TCPPHHLKCANTNICVEPYWLCDGDNDCGDMSDED 558
C +C +C+ W CDGD DC D SDE
Sbjct: 3 GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEK 37
Score = 44.8 bits (106), Expect = 3e-07
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 307 STCSSSQFRC-NNGKCIDYHLVCNKESDCEDDSDE 340
C + +F+C +G CI C+ ++DC D SDE
Sbjct: 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 36
Score = 43.3 bits (102), Expect = 1e-06
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Query: 402 PAMCHNRPCDKDTEFACR-NGHCIPKLWVCDFDNDCGDDSDE 442
P CH EF CR +G CIP W CD D DC D SDE
Sbjct: 1 PGGCH------TDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 36
Score = 42.9 bits (101), Expect = 2e-06
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 452 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCP 492
C +C + + CIP CDG DC D SDE ++C
Sbjct: 4 CHTDEFQC--RLDGLCIPLRWRCDGDTDCMDSSDE--KSCE 40
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 46.0 bits (109), Expect = 1e-07
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 346 VDECAKV--ETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDI 388
VDEC ++ C H C + L GYYC C GY L ++ C+ +
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 45.9 bits (109), Expect = 2e-07
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 357 CGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391
C C + C C GY L ++GKAC
Sbjct: 10 CDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 44
>d1f5ya2 g.12.1.1 (A:45-85) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 45.2 bits (107), Expect = 2e-07
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 522 NITCPPHHLKCANTN-ICVEPYWLCDGDNDCGDMSDE 557
++TC C C+ +W CDG DC + SDE
Sbjct: 2 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 44.4 bits (105), Expect = 5e-07
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 306 NSTCSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE 340
+ TC S F C +CI C+ + DC++ SDE
Sbjct: 2 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 43.3 bits (102), Expect = 1e-06
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 412 KDTEFAC--RNGHCIPKLWVCDFDNDCGDDSDE 442
K +F+C R CIP+ W CD DC + SDE
Sbjct: 6 KSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 40.9 bits (96), Expect = 7e-06
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 452 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
C G C G RCIP++ CDG+ DC +GSDE Q C
Sbjct: 5 CKSGDFSC-GGRVNRCIPQFWRCDGQVDCDNGSDE--QGC 41
>d2gtlm2 g.12.1.1 (M:60-101) Hemoglobin linker chain l1 {Common
earthworm (Lumbricus terrestris) [TaxId: 6398]}
Length = 42
Score = 45.2 bits (107), Expect = 2e-07
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 524 TCPPHHLKCAN-TNICVEPYWLCDGDNDCGDMSDEDPLHC 562
C H +C C+ CDG+ DC D SDEDP C
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 44.9 bits (106), Expect = 3e-07
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 413 DTEFACRN--GHCIPKLWVCDFDNDCGDDSDEPAYMC 447
+ E CR CI L CD + DC D SDE C
Sbjct: 5 EHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 44.5 bits (105), Expect = 4e-07
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 451 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
+C + C G CI LFCDG+ DCRDGSDE P+ C
Sbjct: 2 HCDEHESECRGDVP-ECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 40.2 bits (94), Expect = 1e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 308 TCSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE-PLHCN 345
C + C + +CI L C+ E DC D SDE P C+
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
>d2gtln2 g.12.1.1 (N:61-101) Extracellular hemoglobin linker l2
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 45.3 bits (107), Expect = 2e-07
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 525 CPPHHLKCAN-TNICVEPYWLCDGDNDCGDMSDEDPLHC 562
C +C C+ +CDG DC + DEDP C
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 43.7 bits (103), Expect = 7e-07
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 451 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
+C K +C G CI L CDG DC + DE P C
Sbjct: 1 HCEKRTFQCGGNEQ-ECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 43.7 bits (103), Expect = 9e-07
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 415 EFACRN--GHCIPKLWVCDFDNDCGDDSDEPAYMC 447
F C CI L VCD DC + DE +C
Sbjct: 6 TFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 39.9 bits (93), Expect = 2e-05
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 309 CSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE-PLHCN 345
C F+C N +CI LVC+ DC + DE P C+
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCD 41
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 44.5 bits (105), Expect = 4e-07
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTD 387
V+EC T CV+T Y C+C ++L C D
Sbjct: 3 VNECL-DPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43
Score = 24.5 bits (53), Expect = 5.0
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Query: 386 TDIDECIEQPGVCSQYPAMCHNRP 409
TD++EC++ S C N P
Sbjct: 1 TDVNECLDPTTCISG---NCVNTP 21
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 44.4 bits (105), Expect = 4e-07
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKAC 385
+DEC + G C +T Y CEC G++L + AC
Sbjct: 2 IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41
Score = 26.3 bits (58), Expect = 1.3
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Query: 387 DIDECIEQPGVCSQYPAMCHNRP 409
DIDEC P +C +CHN
Sbjct: 1 DIDECQRDPLLCRG--GVCHNTE 21
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 44.4 bits (105), Expect = 5e-07
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 357 CGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391
C H C++ + C C GYKL +D C +
Sbjct: 9 CTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 44.6 bits (105), Expect = 5e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 345 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACT 386
+ QC H C + + GY+C C GY+L ED +C
Sbjct: 10 RSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51
>d2gtlo2 g.12.1.1 (O:60-100) Extracellular hemoglobin linker l3
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 44.0 bits (104), Expect = 6e-07
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 308 TCSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE 340
+C + +C ++ +CI VC+ +DC + DE
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 42.9 bits (101), Expect = 1e-06
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 413 DTEFACR--NGHCIPKLWVCDFDNDCGDDSDE 442
+ E C + CI KL+VCD NDC + DE
Sbjct: 5 EHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 41.7 bits (98), Expect = 3e-06
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 524 TCPPHHLKCANTN-ICVEPYWLCDGDNDCGDMSDE 557
+C H +C + C+ ++CDG NDC + DE
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 41.7 bits (98), Expect = 4e-06
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 451 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPL 493
+C + +C G + +CI K CDG +DCR+G DE ++C L
Sbjct: 2 SCDEHEHQCGG-DDPQCISKLFVCDGHNDCRNGEDE--KDCTL 41
>d1v9u5_ g.12.1.1 (5:) Very low-density lipoprotein receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 42.1 bits (99), Expect = 3e-06
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 415 EFACRNGH--CIPKLWVCDFDNDCGDDSDE 442
E +C CIP W CD +NDC DE
Sbjct: 5 EISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 41.0 bits (96), Expect = 7e-06
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 525 CPPHHLKCAN-TNICVEPYWLCDGDNDCGDMSDED 558
C H + C + C+ W CDG+NDC DE+
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEE 35
Score = 41.0 bits (96), Expect = 7e-06
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 309 CSSSQFRCNNG--KCIDYHLVCNKESDCEDDSDE 340
C + C +CI C+ E+DC+ DE
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 37.9 bits (88), Expect = 8e-05
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 452 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
C C + +CIP CDG++DC G DE +NC
Sbjct: 1 CRIHEISCGAHST-QCIPVSWRCDGENDCDSGEDE--ENC 37
>d1k7ba_ g.12.1.1 (A:) soluble Tva ectodomain, sTva47 {Quail
(Coturnix coturnix) [TaxId: 9091]}
Length = 42
Score = 41.8 bits (98), Expect = 3e-06
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 412 KDTEFACRN-----GHCIPKLWVCDFDNDCGDDSDE 442
+F C G C P+ W+CD DC D DE
Sbjct: 3 PPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 41.8 bits (98), Expect = 4e-06
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 308 TCSSSQFRCNN-----GKCIDYHLVCNKESDCEDDSDE 340
+C QFRC+ G+C +C+ DC+D DE
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 41.4 bits (97), Expect = 5e-06
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 524 TCPPHHLKCANTNI----CVEPYWLCDGDNDCGDMSDE 557
+CPP +C+ C WLCDG DC D DE
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 39.5 bits (92), Expect = 2e-05
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 451 NCTKGWERC--PGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 491
+C G RC P + C P+ CDG DC DG DE C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE--WGC 41
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 42.1 bits (99), Expect = 4e-06
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 357 CGHKCVDTL-TGYYCECNTGYKLLEDGKACTDIDEC 391
C C ++ C C GY+L E+ K+C
Sbjct: 10 CEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 40.5 bits (95), Expect = 8e-06
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKAC 385
+EC C H C D GY C C G++L+ + C
Sbjct: 2 TNECL-DNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRC 39
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 39.4 bits (92), Expect = 3e-05
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 357 CGHKCVDTLTG-YYCECNTGYKLLEDGKACTDIDEC 391
C C D C C+ GY LL DG +CT E
Sbjct: 9 CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 38.6 bits (90), Expect = 5e-05
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTD 387
+DEC C C + + C C L G+ TD
Sbjct: 2 IDECE--NGGFCSGVCHNLPGTFECICGPDSAL--AGQIGTD 39
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 38.2 bits (89), Expect = 6e-05
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 345 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTD 387
++DEC +C++T Y CEC GY L G C D
Sbjct: 4 DMDECK-EPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVD 43
Score = 25.1 bits (55), Expect = 2.8
Identities = 7/26 (26%), Positives = 9/26 (34%), Gaps = 3/26 (11%)
Query: 384 ACTDIDECIEQPGVCSQYPAMCHNRP 409
+ D+DEC E C N
Sbjct: 1 SAVDMDECKEPDVCKH---GQCINTD 23
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 42.4 bits (98), Expect = 9e-05
Identities = 24/209 (11%), Positives = 58/209 (27%), Gaps = 17/209 (8%)
Query: 55 KENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKLYW-LDRHSKQLD 113
++ + + DV I++ + E +R + + GR L
Sbjct: 49 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 108
Query: 114 VAELDGTNRKTLKTAIQDPRG-------ITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFT 166
+ G + F ++ G + T
Sbjct: 109 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT 168
Query: 167 RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALT 226
+ +I+ N + L + L+ + + + + L+ I G +P+ F
Sbjct: 169 -VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH 227
Query: 227 LF--------EDHIYWTDWNTKSINRADK 247
+D++Y + + +K
Sbjct: 228 EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 256
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 36.3 bits (84), Expect = 4e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKL-LEDGKAC 385
+DEC +CV+T + C+C+ GY+ K C
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
Score = 27.9 bits (62), Expect = 0.37
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 386 TDIDECIEQPGVCSQYPAMCHNRP 409
TDIDEC P +C + C N P
Sbjct: 1 TDIDECRISPDLCGR--GQCVNTP 22
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 33.8 bits (77), Expect = 0.003
Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 7/45 (15%)
Query: 347 DECAKVETNQCGHKCV------DTLTGYYCECNTGYKLLEDGKAC 385
+ + C + C+ + C C G L D ++C
Sbjct: 5 ERTT-LSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
>d1vl4a_ d.283.1.1 (A:) PmbA-related protein TM0727 {Thermotoga
maritima [TaxId: 2336]}
Length = 433
Score = 36.4 bits (83), Expect = 0.009
Identities = 43/338 (12%), Positives = 94/338 (27%), Gaps = 20/338 (5%)
Query: 100 RKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIG 159
R++ ++L V E +K ++A +D R + + +Y + +G
Sbjct: 102 REMETYVGRFEKLSVKEKMDMAKKAHESAAKDERVVMV---PTVMYKDMVIKKIITNTLG 158
Query: 160 MDGS-------NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHI 212
+D F + + + + L E L + A+ +
Sbjct: 159 LDVESQMDGGFLFAMAIARDANPRSGSWYELARTPEDLNPE--EIGKRAAEEAISLIGSK 216
Query: 213 VISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPL 272
I K P + T D + + N + ++ + I
Sbjct: 217 TIPSGKYPVLMRNTALLDLMEMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYH 276
Query: 273 KGTTRHAWLTAHRGSTTVADMIRSVYLGSGNKENSTCSSSQFRCNNGKCIDYHLVCNKES 332
TT ++ + L + T + N
Sbjct: 277 PKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFVGGIRPVNLML 336
Query: 333 DCEDDSDEPLHCNVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDECI 392
+ S E L +D + + H ++++G + GY +E+G+ I +
Sbjct: 337 MPGEKSFEELLKEMDRGVVITEVEGMHAGANSISGEFSLFAKGY-WVENGE----IAHGV 391
Query: 393 EQPGVCSQYPAMCHN-RPCDKDTEFACRNGHCIPKLWV 429
E + + + D + P + V
Sbjct: 392 EDITISGNFLDLLRKIVLVGNDVKV--SQHTIAPSVLV 427
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 35.5 bits (81), Expect = 0.016
Identities = 28/240 (11%), Positives = 61/240 (25%), Gaps = 35/240 (14%)
Query: 88 HGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKT---------AIQDPRGITLH 138
HG+ +D + H E+ + + I
Sbjct: 100 HGIS-TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV 158
Query: 139 PGIGYV-----YFSSWNLQAYIGKIGMDGSNFTRILTHE-----DDIAWPNALTLDYFTE 188
+ YF L+++ +G+ S T ++ + + N + + +
Sbjct: 159 GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGK 218
Query: 189 RLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYW----TDWNTKSINR 244
+Y A+ I + + V + D+I D
Sbjct: 219 YVYIAELLAHKIHVYEKHANWTLTPL------RVLSFDTLVDNISVDPVTGDLWVGCHPN 272
Query: 245 ADKFNGRDYRVLRNTTHRPYDIHVYHPLKGTTRHAWL---TAHRGSTTVADMIRSVYLGS 301
+ D + I + + T +GST A + +G+
Sbjct: 273 GMRIFFYDAENPPGSE--VLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGT 330
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 30.5 bits (69), Expect = 0.032
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 346 VDECAKVETNQCGH--KCVDTLTGYYCECNTGY 376
VDEC+ N C H KC++TL + C+C GY
Sbjct: 3 VDECSL-GANPCEHAGKCINTLGSFECQCLQGY 34
>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 32.9 bits (74), Expect = 0.068
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 369 YCECNTGYKLLEDGKACTDIDECIEQPGVCSQYPAMCH 406
+C+ G KL +D C DI C+ P ++ +
Sbjct: 1 HCDGRGGLKLSQDMDTCEDILPCV--PFSVAKSVKSLY 36
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 32.5 bits (72), Expect = 0.13
Identities = 30/264 (11%), Positives = 51/264 (19%), Gaps = 29/264 (10%)
Query: 58 RFYFADVAAKTIYRS-RVGSTEKERVIRH-DSHGLEGLAVDWVGRKLYWLDRHSKQLDVA 115
R Y D A V E RVI D L V G + ++
Sbjct: 15 RVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARG 74
Query: 116 ELDGT-----------------NRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKI 158
E P +L P + F ++ +G +
Sbjct: 75 ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 134
Query: 159 GMDGSNFTRILTHEDD-----IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIV 213
++G F R+L D A A + H
Sbjct: 135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 194
Query: 214 ISGQKV-----PHVFALTLFEDHIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHV 268
+ I+ D ++ + V
Sbjct: 195 FLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQV 254
Query: 269 YHPLKGTTRHAWLTAHRGSTTVAD 292
+ + +
Sbjct: 255 AYHRALDRIYLLVDQRDEWRHKTA 278
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 28.9 bits (65), Expect = 0.13
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 345 NVDECAKVETNQC--GHKCVDTLTGYYCECNTGY 376
+ D+C +N C G C D + Y C C G+
Sbjct: 2 DGDQCE---SNPCLNGGSCKDDINSYECWCPFGF 32
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 28.5 bits (64), Expect = 0.20
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 346 VDECAKVETNQC--GHKCVDTLTGYYCECNTGY 376
V+EC +N C C+D + + C C GY
Sbjct: 1 VNECV---SNPCQNDATCLDQIGEFQCICMPGY 30
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 27.7 bits (62), Expect = 0.28
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Query: 346 VDECAKVETNQC--GHKCVDTLTGYYCECNTGY 376
D+CA ++ C G C D L Y C C +
Sbjct: 2 GDQCA---SSPCQNGGSCKDQLQSYICFCLPAF 31
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 27.9 bits (62), Expect = 0.32
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 361 CVDTLTGYYCECNTGYKLLEDGKACTD 387
C D TG+ C C Y +G+ C
Sbjct: 15 CRDYATGFCCRCVANYT--GNGRQCVA 39
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 30.7 bits (68), Expect = 0.40
Identities = 15/233 (6%), Positives = 45/233 (19%), Gaps = 35/233 (15%)
Query: 80 ERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGT-------NRKTLKTAIQDP 132
+ + + D G A+ + + + +
Sbjct: 9 KLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPA 68
Query: 133 RGITLHPGIGY-------VYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTL-- 183
+ P N+ +D +I +
Sbjct: 69 KHAQHVPSPYNTAFSADGKRLYVANITPAASVTVID----AVSKKMLSEIDTAACVLAYP 124
Query: 184 -----------DYFTERLYWADAHL---DYIASVDLDGKHKHIVISGQKVPHVFALTLFE 229
+ ++ +D ++ + + T +
Sbjct: 125 AGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYG 184
Query: 230 DHIYWTDWNTKSINRADKFNGRDYRVLRNTTHRPYDIHVYHPLKGTTRHAWLT 282
++ D++ ++ R RP + R+ L
Sbjct: 185 GNVRSADFSGDKPAFGKPWSLLTDAE-RAEGWRPGGMQQTAVQAKQNRYYVLM 236
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 27.0 bits (60), Expect = 0.56
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Query: 347 DECAKVETNQC--GHKCVDTLTGYYCECNTGY 376
D+C T+ C KC D L Y C C G+
Sbjct: 1 DQCE---TSPCQNQGKCKDGLGEYTCTCLEGF 29
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 26.6 bits (59), Expect = 0.81
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 347 DECAKVETNQC--GHKCVDTLTGYYCECNTGY 376
DECA ++ C +C+D + + CEC TG+
Sbjct: 1 DECA---SSPCLHNGRCLDKINEFQCECPTGF 29
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens
[TaxId: 358]}
Length = 295
Score = 29.2 bits (64), Expect = 1.4
Identities = 22/185 (11%), Positives = 55/185 (29%), Gaps = 5/185 (2%)
Query: 52 FHYKENRFYFADVAAKTIYRSRVGSTEKERVIRHDSHGLEGLAVDWVGRKL--YWLDRHS 109
F ++ ++ + ++ + ++ ++ V G LA ++L
Sbjct: 25 FDPASGTAWWFNILERELHELHL-ASGRKTVHALPFMG-SALAKISDSKQLIASDDGLFL 82
Query: 110 KQLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 169
+ L +HP G ++ + +A G + ++
Sbjct: 83 RDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVAKGKVT 141
Query: 170 THEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE 229
DI+ PN++ Y+ D ++ + V LD + + +
Sbjct: 142 KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM 201
Query: 230 DHIYW 234
D
Sbjct: 202 DGSVC 206
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 26.5 bits (58), Expect = 1.8
Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 15/59 (25%)
Query: 345 NVDECAKVETNQCGH-------KCVDTLTGYYCECNTGYKLLEDGKAC-TDIDECIEQP 395
E K C + K + + Y C+C G+ G C ++ ++
Sbjct: 5 KCAEKEK---TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQNQ 56
>d1j5ua_ d.208.1.1 (A:) Hypothetical protein TM1083 {Thermotoga
maritima [TaxId: 2336]}
Length = 127
Score = 26.7 bits (59), Expect = 3.6
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Query: 76 STEKERVIRHDSHGLEGLAVDWVGRKLYWLD----RHSKQLDVAELDGTNRKTLKTAIQD 131
+E+ + E D V + + + + EL T RK K +
Sbjct: 42 LDTEEKEKMYPLEETEDAFFDTVNDWILEISKGWAPWRIKREGNELKVTFRKIRKKEGTE 101
Query: 132 PRGITLH 138
+ +T H
Sbjct: 102 IKALTYH 108
>d1ccva_ g.22.1.1 (A:) Chymotrypsin inhibitor AMCI {Honeybee (Apis
mellifera) [TaxId: 7460]}
Length = 56
Score = 25.2 bits (55), Expect = 3.9
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 349 CAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDEC 391
CA+ +T C +C C+C G+ +G C + C
Sbjct: 20 CAQPKTRICTMQCRIG-----CQCQEGFLRNGEGA-CVLPENC 56
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase
MurC {Haemophilus influenzae [TaxId: 727]}
Length = 215
Score = 27.5 bits (60), Expect = 4.1
Identities = 18/156 (11%), Positives = 35/156 (22%), Gaps = 1/156 (0%)
Query: 286 GSTTVADMIRSVYLGSGNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCN 345
G TT MI +Y + + E+D D S L
Sbjct: 22 GKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPM 81
Query: 346 VDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDECIEQPGVCSQYPAMC 405
V +E + D + L G A D+ + + +
Sbjct: 82 VSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLME-LVPKVGRQV 140
Query: 406 HNRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSD 441
+ ++ + + +
Sbjct: 141 ITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERIN 176
>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter
pylori, Nap [TaxId: 210]}
Length = 144
Score = 26.2 bits (57), Expect = 6.3
Identities = 15/91 (16%), Positives = 27/91 (29%)
Query: 159 GMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQK 218
+ G++F + ++I A D ER+ H S +
Sbjct: 27 NVKGTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSF 86
Query: 219 VPHVFALTLFEDHIYWTDWNTKSINRADKFN 249
+ ED+ Y + N A+K
Sbjct: 87 HSKDIFKEILEDYKYLEKEFKELSNTAEKEG 117
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 26.7 bits (57), Expect = 7.4
Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 5/199 (2%)
Query: 13 DSIKPWLIFSNKYYVRNMSLDATQYSLVHQDLLNVVAMDFHYKENRFYFADVAAKTIYRS 72
D + V ++ + +++ D LN + Y AD + +
Sbjct: 65 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKL 124
Query: 73 RVGSTEKERVIRHDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDP 132
GS + + + +G+AVD G +++ + + T I P
Sbjct: 125 AAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP 184
Query: 133 RGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYW 192
GI + + K+ + T + + P A+ +D +Y
Sbjct: 185 WGIAVDEAGTVYVTEHNT--NQVVKLLAGST--TSTVLPFTGLNTPLAVAVDS-DRTVYV 239
Query: 193 ADAHLDYIASVDLDGKHKH 211
AD D + + H H
Sbjct: 240 ADRGNDRVVKLTSLEHHHH 258
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 24.0 bits (52), Expect = 7.6
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Query: 347 DECAKVETNQCGH--KCVDTLTGYYCECNTGY 376
C C +CV+T+ Y C+C+ G+
Sbjct: 2 AACT---NTSCSGHGECVETINNYTCKCDPGF 30
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 24.4 bits (53), Expect = 7.7
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 346 VDECAKVETNQCGH-KCVDTLTGYYCECNTGY 376
CA + CGH C+D + + C+C +G+
Sbjct: 8 EHPCA---SLCCGHGTCIDGIGSFSCDCRSGW 36
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 24.0 bits (52), Expect = 7.8
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 5/32 (15%)
Query: 347 DECAKVETNQCGH--KCVDTLTGYYCECNTGY 376
C C +C++T+ Y C C G+
Sbjct: 2 ASCQ---DMSCSKQGECLETIGNYTCSCYPGF 30
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 26.6 bits (57), Expect = 8.6
Identities = 26/255 (10%), Positives = 54/255 (21%), Gaps = 16/255 (6%)
Query: 77 TEKERVIR----HDSHGLEGLAVDWVGRKLYWLDRHSKQLDVAELDGTNRKTLKTAIQDP 132
+ V + D G + R Y L+ H + +D K A
Sbjct: 25 VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG--IDLDTCKNTFHANLSS 82
Query: 133 RGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYW 192
+ + S + Y N T+ L + P
Sbjct: 83 VPGEVGRSMYSFAISPDGKEVYA------TVNPTQRLNDHYVVKPPRLEVFSTADGLEAK 136
Query: 193 ADAHLDYIASVDL--DGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNG 250
V L + ++G + + T + A +
Sbjct: 137 PVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSA--PDV 194
Query: 251 RDYRVLRNTTHRPYDIHVYHPLKGTTRHAWLTAHRGSTTVADMIRSVYLGSGNKENSTCS 310
+ ++ H ++ K + D+ + +
Sbjct: 195 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 254
Query: 311 SSQFRCNNGKCIDYH 325
+ R Y
Sbjct: 255 FTGLRSPKDPNQIYG 269
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide
synthetase MurE {Escherichia coli [TaxId: 562]}
Length = 234
Score = 26.3 bits (56), Expect = 9.4
Identities = 9/176 (5%), Positives = 28/176 (15%), Gaps = 10/176 (5%)
Query: 286 GSTTVADMIRSV---------YLGS-GNKENSTCSSSQFRCNNGKCIDYHLVCNKESDCE 335
G TT ++ +G+ GN ++ + + + L +
Sbjct: 15 GKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGAT 74
Query: 336 DDSDEPLHCNVDECAKVETNQCGHKCVDTLTGYYCECNTGYKLLEDGKACTDIDECIEQP 395
+ E + + + + C +
Sbjct: 75 FCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAI 134
Query: 396 GVCSQYPAMCHNRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRN 451
+ + +
Sbjct: 135 INADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSW 190
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.465
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,372,932
Number of extensions: 121943
Number of successful extensions: 624
Number of sequences better than 10.0: 1
Number of HSP's gapped: 553
Number of HSP's successfully gapped: 200
Length of query: 573
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 483
Effective length of database: 1,171,896
Effective search space: 566025768
Effective search space used: 566025768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.2 bits)