BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9521
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32LJ2|ARFRP_BOVIN ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1
PE=2 SV=1
Length = 201
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 100/173 (57%), Gaps = 49/173 (28%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLN 60
MYTL+SG YKYM +KDE+CVLILGLDNAGKTT+LE +KT+F KNYKGM+ SKITTTVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 61 IGQIDINTVRLNFWDLGGQLELQSLWDK-------------------------------- 88
IG +D+ RL FWDLGGQ ELQSLWDK
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVT 120
Query: 89 ----------------DIRDCMGVREVKPIFNKNSAHLIGRRDCMVMPVSALT 125
D+ C+ + ++K F+ + A IGRRDC+ SALT
Sbjct: 121 SEALDGVPILVLANKQDVETCLSIPDIKTAFS-DCASKIGRRDCLTQACSALT 172
>sp|Q5R579|ARFRP_PONAB ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1
PE=2 SV=1
Length = 201
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 100/173 (57%), Gaps = 49/173 (28%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLN 60
MYTL+SG YKYM +KDE+C+LILGLDNAGKTT+LE +KT+F KNYKGM+ SKITTTVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 61 IGQIDINTVRLNFWDLGGQLELQSLWDK-------------------------------- 88
IG +D+ RL FWDLGGQ ELQSLWDK
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
Query: 89 ----------------DIRDCMGVREVKPIFNKNSAHLIGRRDCMVMPVSALT 125
D+ C+ + ++K F+ ++ IGRRDC+ SALT
Sbjct: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSK-IGRRDCLTQACSALT 172
>sp|Q13795|ARFRP_HUMAN ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1
PE=1 SV=1
Length = 201
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 100/173 (57%), Gaps = 49/173 (28%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLN 60
MYTL+SG YKYM +KDE+C+LILGLDNAGKTT+LE +KT+F KNYKGM+ SKITTTVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 61 IGQIDINTVRLNFWDLGGQLELQSLWDK-------------------------------- 88
IG +D+ RL FWDLGGQ ELQSLWDK
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120
Query: 89 ----------------DIRDCMGVREVKPIFNKNSAHLIGRRDCMVMPVSALT 125
D+ C+ + ++K F+ ++ IGRRDC+ SALT
Sbjct: 121 SEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSK-IGRRDCLTQACSALT 172
>sp|Q63055|ARFRP_RAT ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus
GN=Arfrp1 PE=2 SV=1
Length = 201
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 99/173 (57%), Gaps = 49/173 (28%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLN 60
MYTL+SG YKYM +KDE+C+LILGLDNAGKTT+LE +KT+F KNYKGM+ SKITTTVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 61 IGQIDINTVRLNFWDLGGQLELQSLWDK-------------------------------- 88
IG +D+ RL FWDLGGQ ELQSLWDK
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120
Query: 89 ----------------DIRDCMGVREVKPIFNKNSAHLIGRRDCMVMPVSALT 125
D+ C+ + ++K F+ + IGRRDC+ SALT
Sbjct: 121 SEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCK-IGRRDCLTQACSALT 172
>sp|Q8BXL7|ARFRP_MOUSE ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1
PE=2 SV=2
Length = 201
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 99/173 (57%), Gaps = 49/173 (28%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLN 60
MYTL+SG YKYM +KDE+C+LILGLDNAGKTT+LE +KT+F KNYKGM+ SKITTTVGLN
Sbjct: 1 MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60
Query: 61 IGQIDINTVRLNFWDLGGQLELQSLWDK-------------------------------- 88
IG +D+ RL FWDLGGQ ELQSLWDK
Sbjct: 61 IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120
Query: 89 ----------------DIRDCMGVREVKPIFNKNSAHLIGRRDCMVMPVSALT 125
D+ C+ + ++K F+ + IGRRDC+ SALT
Sbjct: 121 SEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCK-IGRRDCLTQACSALT 172
>sp|Q02804|ARL3_YEAST ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ARL3 PE=1 SV=1
Length = 198
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 52/174 (29%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLN 60
M+ LV G Y +K+++ +LILGLDNAGKTT+LE+ K +++ +K + KI TVG N
Sbjct: 1 MFHLVKGLYNNWNKKEQYSILILGLDNAGKTTFLETLKKEYSLAFKALE--KIQPTVGQN 58
Query: 61 IGQIDINTVR-LNFWDLGGQLELQSLWD-------------------------------- 87
+ I +++ + L FWD+GGQ L+S+W
Sbjct: 59 VATIPVDSKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVV 118
Query: 88 ----------------KDIRDCMGVREVKPIFNKNSAHLIGRRDCMVMPVSALT 125
+D +D M V+++K +FNK + H I RD V+P+SALT
Sbjct: 119 MDEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEH-ISARDSRVLPISALT 171
>sp|P39110|CIN4_YEAST GTP-binding protein CIN4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CIN4 PE=1 SV=1
Length = 191
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 4 LVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQ 63
L+S K LR E LILGLDN+GK+T + K +N G+ P TVG I
Sbjct: 3 LLSIIRKQKLRDKEIRCLILGLDNSGKSTIVNKLLPKDEQNNDGIMP-----TVGFQIHS 57
Query: 64 IDINTVRLNFWDLGGQLELQSLWD 87
+ I V ++ WD+GGQ L+ WD
Sbjct: 58 LMIKDVTISLWDIGGQRTLRPFWD 81
>sp|Q9D0J4|ARL2_MOUSE ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2
PE=1 SV=1
Length = 184
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 4 LVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQ 63
L++ K ++ E +L+LGLDNAGKTT L K + G + I+ T+G NI
Sbjct: 3 LLTILKKMKQKERELRLLMLGLDNAGKTTIL--------KKFNGEDVDTISPTLGFNIKT 54
Query: 64 IDINTVRLNFWDLGGQLELQSLW 86
++ +LN WD+GGQ L+S W
Sbjct: 55 LEHRGFKLNIWDVGGQKSLRSYW 77
>sp|P36404|ARL2_HUMAN ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2
PE=1 SV=4
Length = 184
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 4 LVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQ 63
L++ K ++ E +L+LGLDNAGKTT L K + G + I+ T+G NI
Sbjct: 3 LLTILKKMKQKERELRLLMLGLDNAGKTTIL--------KKFNGEDIDTISPTLGFNIKT 54
Query: 64 IDINTVRLNFWDLGGQLELQSLW 86
++ +LN WD+GGQ L+S W
Sbjct: 55 LEHRGFKLNIWDVGGQKSLRSYW 77
>sp|Q2TA37|ARL2_BOVIN ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=1
SV=1
Length = 184
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 4 LVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQ 63
L++ K ++ E +L+LGLDNAGKTT L K + G + I+ T+G NI
Sbjct: 3 LLTILKKMKQKERELRLLMLGLDNAGKTTIL--------KKFNGEDIDTISPTLGFNIKT 54
Query: 64 IDINTVRLNFWDLGGQLELQSLW 86
++ +LN WD+GGQ L+S W
Sbjct: 55 LEHRGFKLNIWDVGGQKSLRSYW 77
>sp|Q06849|ARL2_DROME ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster
GN=Arf84F PE=2 SV=2
Length = 184
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 14 RKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNF 73
++ E +L+LGLDNAGKTT L K + G I+ T+G NI ++ N LN
Sbjct: 13 KEREMRILLLGLDNAGKTTIL--------KRFNGEPIDTISPTLGFNIKTLEHNGYTLNM 64
Query: 74 WDLGGQLELQSLW 86
WD+GGQ L+S W
Sbjct: 65 WDVGGQKSLRSYW 77
>sp|Q54UF1|ARL2_DICDI ADP-ribosylation factor-like protein 2 OS=Dictyostelium
discoideum GN=arl2 PE=3 SV=1
Length = 184
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 20 VLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDLGGQ 79
+L+LGLDNAGKTT L K + G + S I+ T+G NI + +LN WD+GGQ
Sbjct: 19 ILMLGLDNAGKTTIL--------KKFNGEDISTISPTLGFNIQTLMYKEYKLNIWDIGGQ 70
Query: 80 LELQSLW 86
L+S W
Sbjct: 71 KTLRSYW 77
>sp|O08697|ARL2_RAT ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus
GN=Arl2 PE=1 SV=1
Length = 184
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 4 LVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQ 63
L++ K ++ + +L+LGLDNAGKTT L K + G + I+ T+G NI
Sbjct: 3 LLTILKKMKQKERDVRLLMLGLDNAGKTTIL--------KKFNGEDVDTISPTLGFNIKT 54
Query: 64 IDINTVRLNFWDLGGQLELQSLW 86
++ +LN WD+GGQ L+S W
Sbjct: 55 LEHRGFKLNIWDVGGQKSLRSYW 77
>sp|Q627K4|ARL2_CAEBR ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae
GN=evl-20.1 PE=3 SV=1
Length = 184
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 7 GFYKYM----LRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIG 62
GF K + R+ E +LILGLDNAGKTT + K + I T+G +I
Sbjct: 2 GFLKILRKQRAREREMRILILGLDNAGKTTLM--------KKFLDEPTDTIEPTLGFDIK 53
Query: 63 QIDINTVRLNFWDLGGQLELQSLW 86
+ +LN WD+GGQ L+S W
Sbjct: 54 TVHFKDFQLNLWDVGGQKSLRSYW 77
>sp|Q19705|ARL2_CAEEL ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans
GN=evl-20 PE=2 SV=2
Length = 184
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 7 GFYKYM----LRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIG 62
GF K + R+ E +LILGLDNAGKTT + K + I T+G +I
Sbjct: 2 GFLKILRKQRAREREMRILILGLDNAGKTTLM--------KKFLDEPTDTIEPTLGFDIK 53
Query: 63 QIDINTVRLNFWDLGGQLELQSLW 86
+ +LN WD+GGQ L+S W
Sbjct: 54 TVHFKDFQLNLWDVGGQKSLRSYW 77
>sp|Q8QHI3|ARL3_XENLA ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3
PE=2 SV=1
Length = 182
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|B5FYQ0|ARL3_TAEGU ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata
GN=ARL3 PE=2 SV=1
Length = 182
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|P37996|ARL3_RAT ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus
GN=Arl3 PE=1 SV=2
Length = 182
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|Q2TBW6|ARL3_BOVIN ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2
SV=1
Length = 182
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|Q9WUL7|ARL3_MOUSE ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3
PE=1 SV=1
Length = 182
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|Q52NJ4|ARL3_PIG ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2
SV=1
Length = 182
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|P36405|ARL3_HUMAN ADP-ribosylation factor-like protein 3 OS=Homo sapiens GN=ARL3
PE=1 SV=2
Length = 182
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|Q5RCQ6|ARL3_PONAB ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3
PE=2 SV=1
Length = 165
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDNAGKTT L K + S IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNAGKTTLL--------KQLASEDISHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|Q2KJ96|ARL5A_BOVIN ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A
PE=2 SV=1
Length = 179
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 12 MLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRL 71
+ E V+I+GLDNAGKTT L +F+ N + T+G N+ +I IN R
Sbjct: 11 LFNHQEHKVIIVGLDNAGKTTIL----YQFSMN----EVVHTSPTIGSNVEEIVINNTRF 62
Query: 72 NFWDLGGQLELQSLWD 87
WD+GGQ L+S W+
Sbjct: 63 LMWDIGGQESLRSSWN 78
>sp|Q9Y689|ARL5A_HUMAN ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A
PE=1 SV=1
Length = 179
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 12 MLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRL 71
+ E V+I+GLDNAGKTT L +F+ N + T+G N+ +I IN R
Sbjct: 11 LFNHQEHKVIIVGLDNAGKTTIL----YQFSMN----EVVHTSPTIGSNVEEIVINNTRF 62
Query: 72 NFWDLGGQLELQSLWD 87
WD+GGQ L+S W+
Sbjct: 63 LMWDIGGQESLRSSWN 78
>sp|P40994|ARF3_YEAST ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ARF3 PE=1 SV=2
Length = 183
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLD AGKTT L K K T TVG N+ + V+ N WD+
Sbjct: 17 EMKILMLGLDKAGKTTILYKLKLNKIKTS--------TPTVGFNVETVTYKNVKFNMWDV 68
Query: 77 GGQLELQSLW 86
GGQ L+ LW
Sbjct: 69 GGQQRLRPLW 78
>sp|P51646|ARL5A_RAT ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus
GN=Arl5a PE=2 SV=1
Length = 179
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 12 MLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRL 71
+ E V+I+GLDNAGKTT L +F+ N + T+G N+ +I +N R
Sbjct: 11 LFNHQEHKVIIVGLDNAGKTTIL----YQFSMN----EVVHTSPTIGSNVEEIVVNNTRF 62
Query: 72 NFWDLGGQLELQSLWD 87
WD+GGQ L+S W+
Sbjct: 63 LMWDIGGQESLRSSWN 78
>sp|Q9Y7Z2|ARF6_SCHPO ADP-ribosylation factor 6 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=arf6 PE=3 SV=1
Length = 184
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 3 TLVSGFYKYMLR---KDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKIT-TTVG 58
+L GF K R E +L+LGLD AGKTT L K +N S +T TVG
Sbjct: 4 SLFKGFSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLK---------LNQSVVTIPTVG 54
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLW 86
N+ + ++ N WD+GGQ +++ LW
Sbjct: 55 FNVETVTYKNIKFNVWDVGGQDKIRPLW 82
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 20 VLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDLGGQ 79
V++LGLD AGKT+ + K +P T+G NI I RLNFWD+GG
Sbjct: 372 VVLLGLDGAGKTSIVRRLKKVQMDTVMAPHP-----TIGFNIETIHYKNYRLNFWDVGGL 426
Query: 80 LELQSLW 86
+L+ LW
Sbjct: 427 PKLRHLW 433
>sp|Q20758|ARL1_CAEEL ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans
GN=arl-1 PE=3 SV=2
Length = 180
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 5 VSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVGLNIG 62
V +++ + E +LILGLD AGKTT L Y+ +TT T+G N+
Sbjct: 4 VMSYFRGLFGAREMRILILGLDGAGKTTIL----------YRLQVGEVVTTIPTIGFNVE 53
Query: 63 QIDINTVRLNFWDLGGQLELQSLW 86
Q++ ++ WDLGGQ ++ W
Sbjct: 54 QVEYKNLKFQVWDLGGQTSIRPYW 77
>sp|P61214|ARL4A_RAT ADP-ribosylation factor-like protein 4A OS=Rattus norvegicus
GN=Arl4a PE=2 SV=1
Length = 200
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 18 FCVLILGLDNAGKTTYLESAK-TKF--TKNYKGMNPSKITTTVGLNIGQIDINTVRLNFW 74
F ++ILGLD AGKTT L + +F T KG N KI T+G + TV +FW
Sbjct: 21 FHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLG------NSKTVTFHFW 74
Query: 75 DLGGQLELQSLWDKDIRDCMGV 96
D+GGQ +L+ LW R G+
Sbjct: 75 DVGGQEKLRPLWKSYTRCTDGI 96
>sp|P61213|ARL4A_MOUSE ADP-ribosylation factor-like protein 4A OS=Mus musculus GN=Arl4a
PE=2 SV=1
Length = 200
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 18 FCVLILGLDNAGKTTYLESAK-TKF--TKNYKGMNPSKITTTVGLNIGQIDINTVRLNFW 74
F ++ILGLD AGKTT L + +F T KG N KI T+G + TV +FW
Sbjct: 21 FHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLG------NSKTVTFHFW 74
Query: 75 DLGGQLELQSLWDKDIRDCMGV 96
D+GGQ +L+ LW R G+
Sbjct: 75 DVGGQEKLRPLWKSYTRCTDGI 96
>sp|Q3T0M9|ARL4A_BOVIN ADP-ribosylation factor-like protein 4A OS=Bos taurus GN=ARL4A
PE=2 SV=1
Length = 200
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 18 FCVLILGLDNAGKTTYLESAK-TKF--TKNYKGMNPSKITTTVGLNIGQIDINTVRLNFW 74
F ++ILGLD AGKTT L + +F T KG N KI T+G + TV +FW
Sbjct: 21 FHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLG------NSKTVTFHFW 74
Query: 75 DLGGQLELQSLWDKDIRDCMGV 96
D+GGQ +L+ LW R G+
Sbjct: 75 DVGGQEKLRPLWKSYTRCTDGI 96
>sp|Q1MTE5|ARL3_DANRE ADP-ribosylation factor-like protein 3 OS=Danio rerio GN=arl3
PE=2 SV=1
Length = 182
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRLNFWDL 76
E +L+LGLDN GKTT L K + + IT T G NI + +LN WD+
Sbjct: 17 EVRILLLGLDNGGKTTLL--------KQLASEDITHITPTQGFNIKSVQSQGFKLNVWDI 68
Query: 77 GGQLELQSLW 86
GGQ +++ W
Sbjct: 69 GGQRKIRPYW 78
>sp|P40617|ARL4A_HUMAN ADP-ribosylation factor-like protein 4A OS=Homo sapiens GN=ARL4A
PE=1 SV=2
Length = 200
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 18 FCVLILGLDNAGKTTYLESAK-TKF--TKNYKGMNPSKITTTVGLNIGQIDINTVRLNFW 74
F ++ILGLD AGKTT L + +F T KG N KI T+G + TV +FW
Sbjct: 21 FHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLG------NSKTVTFHFW 74
Query: 75 DLGGQLELQSLWDKDIRDCMGV 96
D+GGQ +L+ LW R G+
Sbjct: 75 DVGGQEKLRPLWKSYTRCTDGI 96
>sp|P25160|ARL1_DROME ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster
GN=Arf72A PE=2 SV=5
Length = 180
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 5 VSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVGLNIG 62
V +++ +L E +LILGLD AGKTT L Y+ +TT T+G N+
Sbjct: 4 VLSYFRGLLGSREMRILILGLDGAGKTTIL----------YRLQVGEVVTTIPTIGFNVE 53
Query: 63 QIDINTVRLNFWDLGGQLELQSLW 86
Q+ ++ WDLGGQ ++ W
Sbjct: 54 QVTYKNLKFQVWDLGGQTSIRPYW 77
>sp|Q09767|ARL_SCHPO ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=alp41 PE=3 SV=1
Length = 186
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 4 LVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQ 63
L++ + L++ E VL+LGLDNAGKTT L K ++ ++P T G I
Sbjct: 3 LLTILRQQKLKEREVRVLLLGLDNAGKTTIL---KCLLNEDVNEVSP-----TFGFQIRT 54
Query: 64 IDINTVRLNFWDLGGQLELQSLW 86
+++ +R WD+GGQ L++ W
Sbjct: 55 LEVEGLRFTIWDIGGQKTLRNFW 77
>sp|Q80ZU0|ARL5A_MOUSE ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a
PE=2 SV=1
Length = 179
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 12 MLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQIDINTVRL 71
+ E V+I+GLDNAGKTT L +F+ N + T+G N+ +I +N R
Sbjct: 11 LFNHQEHKVIIVGLDNAGKTTIL----YQFSMN----EVVHTSPTIGSNVEEIVVNNTRF 62
Query: 72 NFWDLGGQLELQSLWD 87
WD+GGQ L+ W+
Sbjct: 63 LMWDIGGQESLRPSWN 78
>sp|O45379|ARL3_CAEEL ADP-ribosylation factor-like protein 3 OS=Caenorhabditis elegans
GN=arl-3 PE=1 SV=1
Length = 184
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 17 EFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITTTVGLNIGQI-DINTVRLNFWD 75
E +L+LGLDNAGKTT L K + +T T G N+ + + +RLN WD
Sbjct: 17 EIRILLLGLDNAGKTTIL--------KQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWD 68
Query: 76 LGGQLELQSLW 86
+GGQ ++ W
Sbjct: 69 IGGQRSIRPYW 79
>sp|P11076|ARF1_YEAST ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ARF1 PE=1 SV=3
Length = 181
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M S + + E +L++GLD AGKTT L YK ITT T+G
Sbjct: 1 MGLFASKLFSNLFGNKEMRILMVGLDGAGKTTVL----------YKLKLGEVITTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
N+ + + WD+GGQ ++SLW R+ GV
Sbjct: 51 FNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGV 88
>sp|Q2KI07|ARL8B_BOVIN ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B
PE=2 SV=1
Length = 186
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 15/103 (14%)
Query: 1 MYTLVS---GFYKYMLRKDEFCVLILGLDNAGKTTYLES-AKTKFTKNYKGMNPSKITTT 56
M L+S +++ + K+E + ++GL +GKTT++ A +F+++ + T
Sbjct: 1 MLALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSED--------MIPT 52
Query: 57 VGLNIGQIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGVREV 99
VG N+ ++ V + WD+GGQ QS+W+ R C GV +
Sbjct: 53 VGFNMRKVTKGNVTIKIWDIGGQPRFQSMWE---RYCRGVNAI 92
>sp|P36579|ARF1_SCHPO ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=arf1 PE=2 SV=2
Length = 180
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 5 VSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVGLNIG 62
+S ++ + K E +L++GLD AGKTT L YK +TT T+G N+
Sbjct: 5 ISKLFQSLFGKREMRILMVGLDAAGKTTIL----------YKLKLGEIVTTIPTIGFNVE 54
Query: 63 QIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
++ + WD+GGQ +++ LW ++ G+
Sbjct: 55 TVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGI 88
>sp|P40940|ARF3_ARATH ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1
SV=2
Length = 182
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M L + + + E +L+LGLDNAGKTT L Y+ ++T T+G
Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTIL----------YRLQMGEVVSTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLW 86
N+ + N ++ WDLGGQ ++ W
Sbjct: 51 FNVETVQYNNIKFQVWDLGGQTSIRPYW 78
>sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis
GN=ARF1 PE=2 SV=3
Length = 182
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M L + + + E +L+LGLDNAGKTT L Y+ ++T T+G
Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTIL----------YRLQMGEVVSTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLW 86
N+ + N ++ WDLGGQ ++ W
Sbjct: 51 FNVETVQYNNIKFQVWDLGGQTSIRPYW 78
>sp|P19146|ARF2_YEAST ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ARF2 PE=1 SV=3
Length = 181
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 5 VSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVGLNIG 62
S + + E +L++GLD AGKTT L YK ITT T+G N+
Sbjct: 5 ASKLFSNLFGNKEMRILMVGLDGAGKTTVL----------YKLKLGEVITTIPTIGFNVE 54
Query: 63 QIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
+ + WD+GGQ ++SLW R+ GV
Sbjct: 55 TVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGV 88
>sp|P51643|ARF1_XENLA ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2
Length = 181
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M + + +K + K E +L++GLD AGKTT L YK +TT T+G
Sbjct: 1 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YKLKLGEIVTTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
N+ ++ + WD+GGQ +++ LW ++ G+
Sbjct: 51 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
>sp|P51824|ARF1_SOLTU ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2
Length = 197
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 VSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVGLNIG 62
+S + + K E +L++GLD AGKTT L YK +TT T+G N+
Sbjct: 5 ISKLFSRLFAKKEMRILMVGLDAAGKTTIL----------YKLKLGEIVTTIPTIGFNVE 54
Query: 63 QIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
++ + WD+GGQ +++ LW ++ G+
Sbjct: 55 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
>sp|P84079|ARF1_RAT ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2
Length = 181
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M + + +K + K E +L++GLD AGKTT L YK +TT T+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YKLKLGEIVTTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
N+ ++ + WD+GGQ +++ LW ++ G+
Sbjct: 51 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
>sp|P84078|ARF1_MOUSE ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2
Length = 181
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M + + +K + K E +L++GLD AGKTT L YK +TT T+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YKLKLGEIVTTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
N+ ++ + WD+GGQ +++ LW ++ G+
Sbjct: 51 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
>sp|Q4R5P2|ARF1_MACFA ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2
SV=3
Length = 181
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 1 MYTLVSGFYKYMLRKDEFCVLILGLDNAGKTTYLESAKTKFTKNYKGMNPSKITT--TVG 58
M + + +K + K E +L++GLD AGKTT L YK +TT T+G
Sbjct: 1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTIL----------YKLKLGEIVTTIPTIG 50
Query: 59 LNIGQIDINTVRLNFWDLGGQLELQSLWDKDIRDCMGV 96
N+ ++ + WD+GGQ +++ LW ++ G+
Sbjct: 51 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,447,088
Number of Sequences: 539616
Number of extensions: 1623242
Number of successful extensions: 5725
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 5311
Number of HSP's gapped (non-prelim): 526
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)