BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy953
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U1Q4|SYV_CAEEL Valine--tRNA ligase OS=Caenorhabditis elegans GN=vrs-2 PE=1 SV=1
Length = 1050
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 97/130 (74%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HDHNDYEV R NLP ++G+I GEF+GMKRFDART V E L EKG
Sbjct: 371 AVKITPAHDHNDYEVGIRQNLPFHNCITDDGLISQGCGEFSGMKRFDARTAVIEALKEKG 430
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
LYRG + MVVP CSRSKDV+EP+LKPQWYV+ MAEKAV AV G+L+IIP+ H T
Sbjct: 431 LYRGKEDNPMVVPTCSRSKDVIEPILKPQWYVKCAHMAEKAVAAVANGDLQIIPEFHKAT 490
Query: 121 WYQWLENNRE 130
W +WLE++R+
Sbjct: 491 WNRWLESSRD 500
>sp|P49696|SYVC_TAKRU Valine--tRNA ligase OS=Takifugu rubripes GN=vars PE=3 SV=1
Length = 1217
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 92/130 (70%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HDHNDYEV R NL I + +E G +I F GMKRFDAR V + L ++
Sbjct: 536 AVKITPAHDHNDYEVGVRHNLAFINILDENGFVINVPPPFLGMKRFDARKAVLQALKDRD 595
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
++ + MVVP+CSRSKD+VEPL+KPQWYV +M ++A AV+ G LKIIPDHH++T
Sbjct: 596 QFKEIKDNPMVVPVCSRSKDIVEPLMKPQWYVSCSDMGKQAADAVREGRLKIIPDHHSQT 655
Query: 121 WYQWLENNRE 130
W+ W++N R+
Sbjct: 656 WFNWMDNIRD 665
>sp|Q9Z1Q9|SYVC_MOUSE Valine--tRNA ligase OS=Mus musculus GN=Vars PE=2 SV=1
Length = 1263
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD NDYEV QR L I++ + +G +I F G+ RF+AR V L E+G
Sbjct: 588 AVKITPAHDQNDYEVGQRHRLEAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERG 647
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+RG + MVVPLC+RSKDVVEPLL+PQWYVR GEMA+ A AV G+L+I+P+ H +T
Sbjct: 648 LFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRT 707
Query: 121 WYQWLENNRE 130
W+ W++N R+
Sbjct: 708 WHSWMDNIRD 717
>sp|P26640|SYVC_HUMAN Valine--tRNA ligase OS=Homo sapiens GN=VARS PE=1 SV=4
Length = 1264
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 92/130 (70%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD NDYEV QR L I++ + G +I F G+ RF+AR V L E+G
Sbjct: 589 AVKITPAHDQNDYEVGQRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLVALKERG 648
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+RG + MVVPLC+RSKDVVEPLL+PQWYVR GEMA+ A AV G+L+I+P+ H +T
Sbjct: 649 LFRGIEDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRT 708
Query: 121 WYQWLENNRE 130
W+ W++N RE
Sbjct: 709 WHAWMDNIRE 718
>sp|Q04462|SYVC_RAT Valine--tRNA ligase OS=Rattus norvegicus GN=Vars PE=2 SV=2
Length = 1264
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD NDYEV QR L I++ + +G ++ F G+ RF+AR V L E+G
Sbjct: 589 AVKITPAHDQNDYEVGQRHRLEAISIMDSKGALVNVPPPFLGLPRFEARKAVLAALKEQG 648
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+RG + MVVPLC+RSKDVVEPLL+PQWYVR GEMA+ A AV G+L+I+P+ H +T
Sbjct: 649 LFRGIKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRT 708
Query: 121 WYQWLENNRE 130
W+ W++N R+
Sbjct: 709 WHSWMDNIRD 718
>sp|Q86KU2|SYVC_DICDI Probable valine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=valS1 PE=3 SV=1
Length = 1072
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKRFDARTRVTEVLTEK 59
VKI+P HD NDYE A R L I +F +EG+I + GE F GMKRFDAR V E L EK
Sbjct: 395 VVKITPSHDPNDYETALRHGLEFINLFTDEGLINENGGERFAGMKRFDARNAVVEALKEK 454
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
L++G + M + LCSRSKDV+EP++KPQWYV+ +MA +AV+AV+ G+LKI P H
Sbjct: 455 NLFKGMKDNKMRLGLCSRSKDVIEPMIKPQWYVKCDDMAARAVKAVRDGDLKITPKTHEV 514
Query: 120 TWYQWLENNRE 130
TWY+WLE ++
Sbjct: 515 TWYRWLEGIKD 525
>sp|O75005|SYV_SCHPO Valine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=vas2 PE=3 SV=1
Length = 980
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 90/127 (70%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD NDYEV +R NL I +F ++G++ + GEF GMKRF AR +V E L E G
Sbjct: 383 AVKITPAHDPNDYEVGKRHNLEFINIFTDDGLLNENCGEFAGMKRFTARVKVVERLKELG 442
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+ GT + MV+PLC ++ D++EP++KPQW+V EMA A + VK+GE++I PD +
Sbjct: 443 LFVGTKENPMVIPLCGKTSDIIEPVMKPQWWVNQKEMAAAAAEVVKSGEIEIAPDMSRRE 502
Query: 121 WYQWLEN 127
+ +W+EN
Sbjct: 503 FIRWMEN 509
>sp|Q54I78|SYVM_DICDI Probable valine--tRNA ligase, mitochondrial OS=Dictyostelium
discoideum GN=valS2 PE=3 SV=2
Length = 1051
Score = 132 bits (333), Expect = 8e-31, Method: Composition-based stats.
Identities = 58/127 (45%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 2 VKISPGHDHNDYEVAQRLNLPLITVFNEEGVI-IGDYGEFTGMKRFDARTRVTEVLTEKG 60
VKI+P HD NDY+ QR +LP++ + N G + EF G+ R DAR+ V E L + G
Sbjct: 317 VKITPAHDFNDYQCGQRHSLPIVNILNSNGTLNENSTAEFEGVDRLDARSMVIEKLEQMG 376
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
LYR ++H + +CSRS D++EP+LKPQWYV+ +MA+K+++ V++GE+KIIP+
Sbjct: 377 LYREKLAHPQTLSICSRSGDLLEPVLKPQWYVKCKDMADKSIEFVESGEIKIIPESFRAD 436
Query: 121 WYQWLEN 127
W +WL N
Sbjct: 437 WSRWLTN 443
>sp|Q8SS27|SYVC_ENCCU Probable valine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU04_1140 PE=3 SV=1
Length = 921
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
VKI+P HD ND+EV++R LP VF+E+ ++ + GEF G+KRF+AR V L + G
Sbjct: 342 VVKITPAHDANDFEVSKRHGLPCKVVFDEQNRVVVE-GEFKGLKRFEARKAVVSKLRDVG 400
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+ H V+P CSRS DV+EP++K QW++ EMA KA++AV+ G + I+P+ K
Sbjct: 401 LFVSKKGHPQVIPRCSRSDDVIEPIIKSQWWLNCKEMARKAIEAVEDGRISILPEGAEKQ 460
Query: 121 WYQWLENNRE 130
WY+WL N R+
Sbjct: 461 WYKWLGNIRD 470
>sp|P28350|SYV_NEUCR Valine--tRNA ligase, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=cyt-20 PE=1 SV=1
Length = 1093
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 85/127 (66%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVK++P HD NDY++ QR NL I + NE G + + G F G KRFDAR V E LT+ G
Sbjct: 422 AVKLTPAHDFNDYQLGQRHNLEFINILNENGTLNDNAGPFKGQKRFDARYTVVEELTKLG 481
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+ + M +PLC +SKDV+EP++ QW+VR EM E A+Q V+ G++KI P+ TK+
Sbjct: 482 LFVKKEPNPMKIPLCEKSKDVIEPMMTEQWWVRMKEMGEAALQVVEEGKVKISPESATKS 541
Query: 121 WYQWLEN 127
+ +WL +
Sbjct: 542 YKRWLAD 548
>sp|P07806|SYV_YEAST Valine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VAS1 PE=1 SV=2
Length = 1104
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYG-EFTGMKRFDARTRVTEVLTEK 59
AVKI+P HD NDY +R NL I + ++G++ + G E+ GMKRFDAR +V E L EK
Sbjct: 434 AVKITPAHDQNDYNTGKRHNLEFINILTDDGLLNEECGPEWQGMKRFDARKKVIEQLKEK 493
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
LY G + M +P CSRS D++EPLLKPQW+V EMA+ A++ V+ G++ I P
Sbjct: 494 NLYVGQEDNEMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVRDGQITITPKSSEA 553
Query: 120 TWYQWLEN 127
++ WL N
Sbjct: 554 EYFHWLGN 561
>sp|Q3A253|SYV_PELCD Valine--tRNA ligase OS=Pelobacter carbinolicus (strain DSM 2380 /
Gra Bd 1) GN=valS PE=3 SV=1
Length = 899
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 85/130 (65%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+E+ +R +L I +F+E GV+ G+ G + G++RF+ARTRV L G
Sbjct: 286 AVKITPAHDFNDFEIGKRHDLEFINIFDESGVVNGNGGRYQGLERFEARTRVLADLDAAG 345
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L T H V C R K V+EP + QWYV +AEKA++AV+TG+ +IIP KT
Sbjct: 346 LLEQTEEHLNAVGECYRCKTVIEPYMSLQWYVNVQPLAEKAIEAVQTGQTRIIPQQWEKT 405
Query: 121 WYQWLENNRE 130
+++W+ N R+
Sbjct: 406 YFEWMFNIRD 415
>sp|P46216|SYV_TRIVA Valine--tRNA ligase (Fragment) OS=Trichomonas vaginalis GN=VALS
PE=3 SV=1
Length = 489
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Query: 2 VKISPGHDHNDYEVAQRL-NLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
VK++PGHD NDYEV +R + LI++ +G I YG+F+GM RFDAR + + + E G
Sbjct: 214 VKVTPGHDPNDYEVYKRHPEIGLISILTPDGAIAPGYGQFSGMMRFDARVEMVKWMKEHG 273
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
LY+ H M + + R D+VE ++ PQW+V T +MA +A++AV GELKI+PD
Sbjct: 274 LYKEEKDHEMRLGITQRGHDIVEQVITPQWFVNTTDMAARAIKAVDDGELKIVPDEFVVD 333
Query: 121 WYQWLENNR 129
W +W EN R
Sbjct: 334 WKKWHENIR 342
>sp|Q74BJ6|SYV_GEOSL Valine--tRNA ligase OS=Geobacter sulfurreducens (strain ATCC 51573
/ DSM 12127 / PCA) GN=valS PE=3 SV=1
Length = 887
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%)
Query: 2 VKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKGL 61
VKI+P HD ND+EV +R NL L+ VF+E V+ ++ GM+RF AR RV E L GL
Sbjct: 275 VKITPAHDFNDFEVGRRHNLDLLNVFDESAVVNSAGHQYEGMERFAARKRVVEDLEALGL 334
Query: 62 YRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKTW 121
HA V C R K VVEP L QWYV+ G +AE+A+ AVK G +I+P T+
Sbjct: 335 LEKIDDHAHAVGGCYRCKTVVEPYLSLQWYVKVGPLAERALAAVKDGRTRIVPQQWENTY 394
Query: 122 YQWLENNRE 130
Y W+EN ++
Sbjct: 395 YDWMENIKD 403
>sp|Q5TM74|SYVM_MACMU Valine--tRNA ligase, mitochondrial OS=Macaca mulatta GN=VARS2 PE=3
SV=2
Length = 1064
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKRFDARTRVTEVLTEK 59
AVK++P H D E+ R L + V E+G + G+ G+ RF AR ++ VL+E+
Sbjct: 391 AVKVTPAHSPADAEMGARHGLSPLNVIAEDGTMTSLCGDWLQGLHRFVAREKIVSVLSER 450
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL+RG +H MV+P+CSRS DV+E LLK QW+VR EM +A QAV++G L++ P H K
Sbjct: 451 GLFRGLQNHPMVLPICSRSGDVIEYLLKSQWFVRCQEMGARAAQAVESGALELSPSFHQK 510
Query: 120 TWYQWLEN 127
W W +
Sbjct: 511 NWQHWFSH 518
>sp|P93736|SYV_ARATH Valine--tRNA ligase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2
Length = 1108
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYG-EFTGMKRFDARTRVTEVLTEK 59
VKI+P HD ND EV +R L I +F ++G I + G +F GM RF AR V E L ++
Sbjct: 421 CVKITPAHDPNDCEVGKRHKLEFINIFTDDGKINTNGGSDFAGMPRFAAREAVVEALQKQ 480
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGE---LKIIPDH 116
GLYRG ++ M + LCSR+ DV+EP++KPQWYV + ++A+ T E L+ +P
Sbjct: 481 GLYRGAKNNEMRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAITDENKKLEFVPKQ 540
Query: 117 HTKTWYQWLENNRE 130
+T W +WLEN R+
Sbjct: 541 YTAEWRRWLENIRD 554
>sp|Q8RHK3|SYV_FUSNN Valine--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=valS PE=3 SV=1
Length = 887
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 83/130 (63%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
A+KI+P HD NDY + ++ NLP+I + +G I+ DY ++ G+ RF+AR ++ E L +
Sbjct: 271 ALKITPAHDPNDYNLGKKYNLPIINMLTPDGKIVEDYPKYAGLDRFEARKKIVEDLKAQD 330
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+ T V C R + V+EP + PQW+V+ +AEKA++ V+ GE+KI+P K
Sbjct: 331 LFIKTEHLHHAVGQCYRCQTVIEPRVSPQWFVKMKPLAEKALEVVRNGEVKILPKRMEKI 390
Query: 121 WYQWLENNRE 130
+Y WLEN R+
Sbjct: 391 YYNWLENIRD 400
>sp|Q767M3|SYVM_PIG Valine--tRNA ligase, mitochondrial OS=Sus scrofa GN=VARS2 PE=3 SV=1
Length = 1062
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKRFDARTRVTEVLTEK 59
AVK++P H D E+ R L ++V E+G + G+ G+ RF AR ++ L E+
Sbjct: 390 AVKVTPAHSPADAELGARHGLSPLSVIAEDGTMTSLCGDWLQGLHRFVAREKIVSALRER 449
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL+RG +H MV+P+CSRS DVVE LLK QW+VR EM E+A +AV +G L++ P H K
Sbjct: 450 GLFRGLQNHPMVLPICSRSGDVVEYLLKSQWFVRCQEMGEQAAKAVVSGALELSPSFHQK 509
Query: 120 TWYQWLEN 127
W W +
Sbjct: 510 NWQHWFSH 517
>sp|Q5ST30|SYVM_HUMAN Valine--tRNA ligase, mitochondrial OS=Homo sapiens GN=VARS2 PE=1
SV=2
Length = 1063
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEF-TGMKRFDARTRVTEVLTEK 59
AVK++P H D E+ R L + V E+G + G++ G+ RF AR ++ VL+E
Sbjct: 390 AVKVTPAHSPADAEMGARHGLSPLNVIAEDGTMTSLCGDWLQGLHRFVAREKIMSVLSEW 449
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL+RG +H MV+P+CSRS DV+E LLK QW+VR EM +A +AV++G L++ P H K
Sbjct: 450 GLFRGLQNHPMVLPICSRSGDVIEYLLKNQWFVRCQEMGARAAKAVESGALELSPSFHQK 509
Query: 120 TWYQWLEN 127
W W +
Sbjct: 510 NWQHWFSH 517
>sp|Q6MG21|SYVM_RAT Valine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Vars2
PE=3 SV=1
Length = 1065
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEF-TGMKRFDARTRVTEVLTEK 59
AVK++P H D E+ R L ++V E+G + G++ G+ RF AR ++ L E+
Sbjct: 390 AVKVTPAHSPADAEMGTRHGLTPLSVIAEDGTMTSLCGDWLQGLHRFVAREKIMCTLRER 449
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL+RG H MV+P+CSRS DVVE LLK QW+VR EM ++A +AV++G L++ P H K
Sbjct: 450 GLFRGLQEHPMVLPICSRSGDVVEYLLKSQWFVRCQEMGDRAAKAVESGALELWPSFHQK 509
Query: 120 TWYQWLEN 127
+W W +
Sbjct: 510 SWQHWFAH 517
>sp|C4V924|SYVC_NOSCE Probable valine--tRNA ligase, cytoplasmic OS=Nosema ceranae (strain
BRL01) GN=NCER_101032 PE=3 SV=1
Length = 883
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
+KI+P HD D+E+ ++ NL I +F+ + II + G + +KR DAR V + L K
Sbjct: 325 VLKITPAHDPIDFEIGKKNNLKNIKIFDNQNKIIIE-GNYYKLKRLDARDLVVQTLKNKN 383
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L+ + V+P+CSRS D++EP++K QW+ EMA+KA+ AVKT ++KI P+
Sbjct: 384 LFVEKKPYEQVLPMCSRSSDLLEPVIKEQWWCSCSEMAKKAIDAVKTEQIKIYPEESKDD 443
Query: 121 WYQWLENNRE 130
WY+W EN R+
Sbjct: 444 WYRWFENPRD 453
>sp|Q3U2A8|SYVM_MOUSE Valine--tRNA ligase, mitochondrial OS=Mus musculus GN=Vars2 PE=2
SV=2
Length = 1060
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEF-TGMKRFDARTRVTEVLTEK 59
AVK++P H D E+ R L ++V E+G + G++ G+ RF AR ++ L E+
Sbjct: 390 AVKVTPAHSPIDAEIGTRHGLTPLSVIAEDGTMTSLCGDWLQGLHRFVAREKIMCTLREQ 449
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL+RG H MV+P+CSRS DVVE LLK QW+VR EM + A +AV++G L++ P H K
Sbjct: 450 GLFRGLQEHPMVLPICSRSGDVVEYLLKSQWFVRCQEMGDLAAKAVESGALELWPSFHQK 509
Query: 120 TWYQWLEN 127
+W W +
Sbjct: 510 SWQHWFAH 517
>sp|Q891R5|SYV_CLOTE Valine--tRNA ligase OS=Clostridium tetani (strain Massachusetts /
E88) GN=valS PE=3 SV=1
Length = 880
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 79/127 (62%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD NDYEV +R +L I + NE G I G+++GM R++AR + E L ++G
Sbjct: 274 AVKITPAHDPNDYEVGKRHDLEEIIIMNENGTINELGGKYSGMDRYEARKAIVEDLKKEG 333
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
H V R ++EP++ QWYV+ E+A+ A++ VK+GE+K +P+ KT
Sbjct: 334 FLVKVKEHIHNVSCHDRCNTIIEPMISKQWYVKMKELAKPAIEVVKSGEIKFVPERFDKT 393
Query: 121 WYQWLEN 127
++ W+EN
Sbjct: 394 YFNWMEN 400
>sp|Q8RBN5|SYV_THETN Valine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=valS PE=3 SV=1
Length = 879
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 79/130 (60%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVK++P HD ND+E+ R NLP + + NE I + G++ G+ R++AR ++ + L E+G
Sbjct: 272 AVKVTPAHDPNDFEIGVRHNLPFVNIMNENATINENGGKYEGLDRYEAREKIVKDLEEQG 331
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L H V C R VVEPLL QW+V+ +A+ A+Q VK G++K +P+ K
Sbjct: 332 LLLKVEEHVHNVGHCYRCDTVVEPLLSEQWFVKMEPLAKPALQVVKEGKIKFVPERFEKI 391
Query: 121 WYQWLENNRE 130
+ WLEN ++
Sbjct: 392 YTNWLENIKD 401
>sp|A6Q3R4|SYV_NITSB Valine--tRNA ligase OS=Nitratiruptor sp. (strain SB155-2) GN=valS
PE=3 SV=1
Length = 871
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVK++P HD NDYEV +R NLP IT+F+E G++ + GEF G++R +AR +V E L ++G
Sbjct: 272 AVKVTPAHDPNDYEVGKRHNLPFITIFDENGILNEEAGEFAGIERLEARKKVVEKLEQEG 331
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
H V C R +VVEP + PQW+V+ E+A++AV+ GE K P
Sbjct: 332 FIEKIEPHKHQVGHCYRCGNVVEPYISPQWFVK-AEIAKEAVKKANEGETKFYPPQWLNN 390
Query: 121 WYQWLENNRE 130
+ W+ R+
Sbjct: 391 FNAWMRELRD 400
>sp|Q01PF1|SYV_SOLUE Valine--tRNA ligase OS=Solibacter usitatus (strain Ellin6076)
GN=valS PE=3 SV=1
Length = 855
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%)
Query: 2 VKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKGL 61
VK++P HD ND+E +R NL I V + + G + G+ RFDAR RV L E G
Sbjct: 272 VKVTPAHDPNDFEAGKRHNLAKIQVIDNNARMTAAAGPYAGLDRFDARKRVVSALEEIGA 331
Query: 62 YRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKTW 121
+ + + C R K VEPL+ QW+V+T +AEKA+ V++GE+ +P + TKT+
Sbjct: 332 LVKVEDYPLSLGKCDRCKTPVEPLISTQWFVKTKPLAEKAIAVVESGEIGFVPQNWTKTY 391
Query: 122 YQWLENNRE 130
Y+W+ N R+
Sbjct: 392 YEWMYNIRD 400
>sp|Q5WYI0|SYV_LEGPL Valine--tRNA ligase OS=Legionella pneumophila (strain Lens) GN=valS
PE=3 SV=1
Length = 921
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYG-EFTGMKRFDARTRVTEVLTEK 59
VKI+P HD ND+EV +R LP I + ++G I + ++ GM RF AR ++ + L ++
Sbjct: 266 CVKITPAHDFNDHEVGKRHQLPQINILTKKGTINKNAPLKYQGMDRFLAREQIIKDLEQE 325
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL T H + VP +S ++EPLL QWYV+T +AE A+ AVK G+++ IP+ K
Sbjct: 326 GLLAKTEPHKLKVPRGEKSNVIIEPLLTDQWYVKTKPLAEPAIAAVKKGDIRFIPETWDK 385
Query: 120 TWYQWLEN 127
T++QW++N
Sbjct: 386 TYFQWMDN 393
>sp|Q83DD0|SYV_COXBU Valine--tRNA ligase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=valS PE=3 SV=1
Length = 920
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKRFDARTRVTEVLTEK 59
++KI+PGHD NDYE+ QR LPLI + EG + + E + G++RF+AR ++ L +
Sbjct: 266 SLKITPGHDFNDYEIGQRHQLPLINILTSEGYLNENVPEPYRGLERFEARKKIIADLQRE 325
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
L T + + VP RS ++EPLL QW+++ +A+ A++AV++GELK IP + K
Sbjct: 326 NLLEKTEPYRVPVPRGERSGVIIEPLLTDQWFIKMEALAKPAMEAVESGELKFIPKNWEK 385
Query: 120 TWYQWLEN 127
T+ QWL N
Sbjct: 386 TYLQWLSN 393
>sp|Q5ZXL2|SYV_LEGPH Valine--tRNA ligase OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=valS
PE=3 SV=1
Length = 921
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYG-EFTGMKRFDARTRVTEVLTEK 59
VKI+P HD ND+EV +R LP I + ++G I + ++ GM RF AR ++ + L ++
Sbjct: 266 CVKITPAHDFNDHEVGKRHQLPQINILTKKGTINKNAPLKYQGMDRFVAREQIIKDLEKE 325
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL T H + VP +S ++EPLL QWYV+T +AE A+ AVK G+++ IP+ K
Sbjct: 326 GLLAKTEPHKLKVPRGEKSNVIIEPLLTDQWYVKTKPLAEPAIAAVKKGDIRFIPETWDK 385
Query: 120 TWYQWLEN 127
T++QW++N
Sbjct: 386 TYFQWMDN 393
>sp|Q5X728|SYV_LEGPA Valine--tRNA ligase OS=Legionella pneumophila (strain Paris)
GN=valS PE=3 SV=1
Length = 921
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYG-EFTGMKRFDARTRVTEVLTEK 59
VKI+P HD ND+EV +R LP I + ++G I + ++ GM RF AR ++ + L ++
Sbjct: 266 CVKITPAHDFNDHEVGKRHQLPQINILTKKGTINKNAPLKYQGMDRFVAREQIIKDLEKE 325
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL T H + VP +S ++EPLL QWYV+T +AE A+ AVK G+++ IP+ K
Sbjct: 326 GLLAKTEPHKLKVPRGEKSNVIIEPLLTDQWYVKTKPLAEPAIAAVKKGDIRFIPETWDK 385
Query: 120 TWYQWLEN 127
T++QW++N
Sbjct: 386 TYFQWMDN 393
>sp|Q3JC50|SYV_NITOC Valine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848) GN=valS PE=3 SV=1
Length = 929
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKRFDARTRVTEVLTEK 59
VKI+P HD NDYEV QR LP I +F + + + E + + RF+AR V L
Sbjct: 266 CVKITPAHDFNDYEVGQRHGLPFINIFTVDASLNENVPERYRNLDRFEARKLVVADLEAA 325
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL H ++VP RS+ V+EP L QW+V+T +AE A+QAV+ G+++ IP++ K
Sbjct: 326 GLLEKIEDHKLMVPRGDRSRTVIEPYLTDQWFVKTAPLAEPAIQAVENGQIRFIPENWNK 385
Query: 120 TWYQWLEN 127
+++W+ N
Sbjct: 386 IYFEWMRN 393
>sp|Q97GG8|SYV_CLOAB Valine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=valS
PE=3 SV=1
Length = 881
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD NDYEV +R +L I + N +G I +G+++GM R++AR + L E+G
Sbjct: 274 AVKITPAHDPNDYEVGKRHDLKEIVMLNNDGTIKEGFGKYSGMDRYEARKAIVSDLKEEG 333
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
H V R +++EP++ QWYV+ +A+ A++AVK G+ K +P+ K
Sbjct: 334 YLVKIKEHVHNVGTHDRCGNIIEPMVSKQWYVKMESLAKPAIEAVKAGKTKFVPERFDKI 393
Query: 121 WYQWLEN 127
++ W+EN
Sbjct: 394 YFNWMEN 400
>sp|Q9X2D7|SYV_THEMA Valine--tRNA ligase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=valS PE=3 SV=1
Length = 865
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 80/130 (61%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVK++P HD NDY +AQR NLP+I +F++ I + G++ G+ R++AR ++ + L E+G
Sbjct: 270 AVKVTPAHDPNDYLIAQRHNLPMIEIFDDNARINENGGKYKGLDRYEAREKIVKDLEEQG 329
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
+ V C R V+EP L QW+V T +A++A++AV+ GE++ P+ TK
Sbjct: 330 FLVKIEDYTHSVGHCYRCDTVIEPKLSDQWFVSTKPLAKRAIEAVENGEIRFFPERWTKV 389
Query: 121 WYQWLENNRE 130
+ W+ R+
Sbjct: 390 YLNWMYEIRD 399
>sp|Q8EZT8|SYV_LEPIN Valine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=valS
PE=3 SV=2
Length = 882
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%)
Query: 2 VKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKGL 61
VKI+P HD ND+E QRL L + V N G + + G + G+ RF+AR +V L KGL
Sbjct: 273 VKITPAHDANDFEAGQRLGLKPLLVMNPNGTMNENAGIYQGLDRFEARKKVLADLEAKGL 332
Query: 62 YRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKTW 121
H V SR V+EP L QW+V+ +A+ AVQAV++G+++ IP KT+
Sbjct: 333 IEKIEDHIHAVGHNSRGGAVIEPYLSTQWFVKIKPLADLAVQAVQSGQVEFIPKMWEKTF 392
Query: 122 YQWLENNRE 130
++W+ N R+
Sbjct: 393 FEWMNNIRD 401
>sp|Q72V30|SYV_LEPIC Valine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=valS PE=3 SV=1
Length = 882
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%)
Query: 2 VKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKGL 61
VKI+P HD ND+E QRL L + V N G + + G + G+ RF+AR +V L KGL
Sbjct: 273 VKITPAHDANDFEAGQRLGLKPLLVMNPNGTMNENAGIYQGLDRFEARKKVLADLEAKGL 332
Query: 62 YRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKTW 121
H V SR V+EP L QW+V+ +A+ AVQAV++G+++ IP KT+
Sbjct: 333 IEKIEDHIHAVGHNSRGGAVIEPYLSTQWFVKIKPLADLAVQAVQSGQVEFIPKMWEKTF 392
Query: 122 YQWLENNRE 130
++W+ N R+
Sbjct: 393 FEWMNNIRD 401
>sp|Q9K8G8|SYV_BACHD Valine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=valS PE=3
SV=1
Length = 880
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+E+ R NLP I V NE+G + G++ GM RF+ R ++ + L E+G
Sbjct: 275 AVKITPAHDPNDFEIGNRHNLPRILVMNEDGTMNEKAGQYEGMDRFECRKQIVKDLQEQG 334
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKT-GELKIIPDHHTK 119
+ H V RS VVEP L QW+V+ +AE+A++ T ++ +PD K
Sbjct: 335 VLFKIEEHVHSVGHSERSGAVVEPYLSTQWFVKMKPLAEQAIELQTTENKVNFVPDRFEK 394
Query: 120 TWYQWLENNRE 130
T+ +W+EN R+
Sbjct: 395 TYLRWMENIRD 405
>sp|Q5N3J4|SYV_SYNP6 Valine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=valS PE=3 SV=1
Length = 909
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
VK++P HD ND+ + QR LPLITV N++G + + G+F G+ RF+AR V L E G
Sbjct: 275 CVKVTPAHDPNDFAMGQRHQLPLITVMNKDGTMNENAGQFEGLDRFEARKAVVAALEEAG 334
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGE-LKIIPDHHTK 119
+ +P+ R K VEPLL QW+V+ +A++A++A+ E + +P+ TK
Sbjct: 335 FLVKVEDYRHSIPISDRGKVPVEPLLSTQWFVKIEPLAQRALEALNGEEGPRFVPERWTK 394
Query: 120 TWYQWLENNRE 130
+ WLEN R+
Sbjct: 395 VYRDWLENLRD 405
>sp|Q606C1|SYV_METCA Valine--tRNA ligase OS=Methylococcus capsulatus (strain ATCC 33009
/ NCIMB 11132 / Bath) GN=valS PE=3 SV=1
Length = 921
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII--GDY-GEFTGMKRFDARTRVTEVLT 57
VKI+P HD NDY + R LP+I++F++ I+ D ++ G+ R++AR V L
Sbjct: 266 CVKITPAHDFNDYAIGVRHALPMISIFDQGAAILPRADIPAKYHGLDRYEARDLVVHDLN 325
Query: 58 EKGLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHH 117
E GL H ++VP R+ VVEP L QW+V+ G +A A++AV+ G ++ +P++
Sbjct: 326 ELGLIEKIEEHRLMVPRGDRTGVVVEPFLTDQWFVKAGPLAGPAIKAVEEGRIRFVPENW 385
Query: 118 TKTWYQWLEN 127
+ T+YQW+ N
Sbjct: 386 SNTYYQWMYN 395
>sp|Q5KWL3|SYV_GEOKA Valine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426)
GN=valS PE=3 SV=1
Length = 880
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+E+ R NLP I V NE+G + + ++ G+ RF+ R ++ L E+G
Sbjct: 275 AVKITPAHDPNDFEIGNRHNLPRILVMNEDGTMNENAMQYQGLDRFECRKQIVRDLQEQG 334
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGE-LKIIPDHHTK 119
+ H V RS VVEP L QW+V+ +AE A++ +T E ++ +PD K
Sbjct: 335 VLFKIEEHVHSVGHSERSGAVVEPYLSTQWFVKMKPLAEAAIKLQQTDEKVQFVPDRFEK 394
Query: 120 TWYQWLENNRE 130
T+ WLEN R+
Sbjct: 395 TYLHWLENIRD 405
>sp|Q3AF87|SYV_CARHZ Valine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=valS PE=3 SV=1
Length = 878
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+EV R LP + V +++ V+ + G++ G+ R++AR ++ E L + G
Sbjct: 271 AVKITPAHDPNDFEVGLRHKLPQVVVLDDDAVMNENAGKYRGLDRYEARKKIVEDLKDLG 330
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L V C R V+EP L QW+V+ +AE A++A TG++K +P+ TK
Sbjct: 331 LLVKEEEITHSVGHCYRCDTVIEPRLSKQWFVKMKPLAEPAIEAALTGKVKFVPERFTKI 390
Query: 121 WYQWLENNRE 130
+ WL N R+
Sbjct: 391 YLNWLYNIRD 400
>sp|Q3SSP4|SYV_NITWN Valine--tRNA ligase OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=valS PE=3 SV=1
Length = 952
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 16/143 (11%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII----GDY------------GEFTGMK 44
AVKI+P HD ND+EV +R +LP I+V + EG + D+ EF GM
Sbjct: 279 AVKITPAHDFNDFEVGRRHHLPQISVLDREGRLTLSENEDFLRGLPSGALMLAEEFDGMD 338
Query: 45 RFDARTRVTEVLTEKGLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQA 104
RF AR + L E G H +VP RS VVEP L QWYV E+A A+ A
Sbjct: 339 RFAARKAIVARLEEFGFLDKIEPHTHMVPHGDRSNAVVEPYLTDQWYVDAKELARPAMAA 398
Query: 105 VKTGELKIIPDHHTKTWYQWLEN 127
V++GE +P + KT+++W+EN
Sbjct: 399 VRSGETAFVPKNWEKTYFEWMEN 421
>sp|Q8XJ42|SYV_CLOPE Valine--tRNA ligase OS=Clostridium perfringens (strain 13 / Type A)
GN=valS PE=3 SV=1
Length = 880
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+EV +R NLP I V ++ GVI G++ G+ R++AR ++ L E G
Sbjct: 273 AVKITPAHDPNDFEVGKRHNLPQIRVMDDSGVINHLGGKYKGLDRYEARKQMVADLEELG 332
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L H V R VVEP++ QWYV+ +A+ A++ V+ K +P+ KT
Sbjct: 333 LLVKIKPHTHNVGTHDRCGTVVEPIISKQWYVKMQSLADPAIEVVRNKGTKFVPERFEKT 392
Query: 121 WYQWLEN 127
++ W+EN
Sbjct: 393 YFNWMEN 399
>sp|Q9KP73|SYV_VIBCH Valine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=valS PE=3 SV=1
Length = 953
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 18/145 (12%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLIT-------------VFNEEGVIIGDYG-----EFTG 42
VKI+P HD NDYEV +R LP+I VFN G YG ++ G
Sbjct: 275 CVKITPAHDFNDYEVGKRHQLPMINILTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQG 334
Query: 43 MKRFDARTRVTEVLTEKGLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAV 102
M+RF AR + E GL + H + VP R V+EP+L QWYVR G +A+ AV
Sbjct: 335 MERFAARKAIVAEFEELGLLQEIKDHDLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAV 394
Query: 103 QAVKTGELKIIPDHHTKTWYQWLEN 127
+AV+ G+++ +P + ++ W+ +
Sbjct: 395 EAVENGDIQFVPKQYENMYFSWMRD 419
>sp|Q6AMA0|SYV_DESPS Valine--tRNA ligase OS=Desulfotalea psychrophila (strain LSv54 /
DSM 12343) GN=valS PE=3 SV=1
Length = 887
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
A+K++P HD NDYE+ R L L V +E+G++ + G++ G+ RF+ R ++ E L E+G
Sbjct: 274 ALKVTPSHDRNDYEIGIRHGLDLCKVIDEKGMMNDNAGKYAGLDRFECRKQIVEDLREQG 333
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
+ V C R K V+EP QW+V +A KAV AV+ G++ I P T
Sbjct: 334 YLVEIEDYDHAVGHCYRCKTVIEPTTSLQWFVSVKPLAAKAVDAVRDGQINIYPKTWYNT 393
Query: 121 WYQWLENNRE 130
+Y W++N R+
Sbjct: 394 FYSWMDNIRD 403
>sp|P11931|SYV_GEOSE Valine--tRNA ligase OS=Geobacillus stearothermophilus GN=valS PE=1
SV=1
Length = 880
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+E+ R NLP I V NE+G + + ++ G+ RF+ R ++ L E+G
Sbjct: 275 AVKITPAHDPNDFEIGNRHNLPRILVMNEDGTMNENAMQYQGLDRFECRKQIVRDLQEQG 334
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKT-GELKIIPDHHTK 119
+ H V RS V+EP L QW+V+ +AE A++ +T G+++ +P+ K
Sbjct: 335 VLFKIEEHVHSVGHSERSGAVIEPYLSTQWFVKMKPLAEAAIKLQQTDGKVQFVPERFEK 394
Query: 120 TWYQWLENNR 129
T+ WLEN R
Sbjct: 395 TYLHWLENIR 404
>sp|Q488M6|SYV_COLP3 Valine--tRNA ligase OS=Colwellia psychrerythraea (strain 34H / ATCC
BAA-681) GN=valS PE=3 SV=1
Length = 973
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 18/145 (12%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIG---------------DYG---EFTG 42
VKI+PGHD ND EV +R LP I + +++ I+ D G EF G
Sbjct: 290 CVKITPGHDFNDNEVGKRHALPQINILDKDAAILATAEVYDTKGEVCNAYDTGLPSEFAG 349
Query: 43 MKRFDARTRVTEVLTEKGLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAV 102
M RF AR + E GL H +V P RS ++EPLL QWYVR ++A AV
Sbjct: 350 MDRFVARKAIVAKFDELGLLVEVKDHDLVAPYGDRSGVIIEPLLTDQWYVRVEKLAGPAV 409
Query: 103 QAVKTGELKIIPDHHTKTWYQWLEN 127
AVK G+++ +P + ++ W+ N
Sbjct: 410 DAVKDGQIEFVPKQYENMYFSWMNN 434
>sp|B7GH39|SYV_ANOFW Valine--tRNA ligase OS=Anoxybacillus flavithermus (strain DSM 21510
/ WK1) GN=valS PE=3 SV=1
Length = 875
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
AVKI+P HD ND+E+ R +LP I V NE+G + + ++ G+ RF+ R ++ + L E+G
Sbjct: 270 AVKITPAHDPNDFEIGNRHHLPRILVMNEDGTMNDNALQYKGLDRFECRKQIVKDLQEQG 329
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKT-GELKIIPDHHTK 119
+ H V RS VVEP L QW+V+ +AE A++ KT G++ +P+ K
Sbjct: 330 VLFKIEEHMHSVGHSERSGAVVEPYLSTQWFVKMKPLAEAAIEQQKTEGKVNFVPERFEK 389
Query: 120 TWYQWLENNRE 130
T+ W+EN R+
Sbjct: 390 TYLHWMENIRD 400
>sp|Q46IA7|SYV_PROMT Valine--tRNA ligase OS=Prochlorococcus marinus (strain NATL2A)
GN=valS PE=3 SV=1
Length = 933
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGEFTGMKRFDARTRVTEVLTEKG 60
VK++P HD ND+E+ QR +LP ITV ++G + + G+F G+ RF+AR V + L E G
Sbjct: 290 CVKVTPAHDPNDFEIGQRHDLPQITVMTKKGTMNHNAGQFEGLDRFEAREAVIDSLKEIG 349
Query: 61 LYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTKT 120
L ++ VP R K VEPLL QW+V+ ++ + + G+ K IP+ +K
Sbjct: 350 LLTKIEAYKHSVPFSDRGKVPVEPLLSTQWFVKMDPLSSSCSEFFEKGQPKFIPNRWSKV 409
Query: 121 WYQWLENNRE 130
+ WL + R+
Sbjct: 410 YRDWLTDIRD 419
>sp|Q82X51|SYV_NITEU Valine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718 /
NBRC 14298) GN=valS PE=3 SV=1
Length = 918
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY-GEFTGMKRFDARTRVTEVLTEK 59
VKI+P HD NDY+V R L + VF +G I + EF G+ RFDAR +V L +
Sbjct: 275 CVKITPAHDFNDYQVGLRHKLIPLNVFTLDGKINDNAPAEFQGLDRFDARKKVIADLQAQ 334
Query: 60 GLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAVQAVKTGELKIIPDHHTK 119
GL T H ++VP R+ V+EP+L QWY+ +A++ + V +G+++ +P++ T
Sbjct: 335 GLLVETRPHKLMVPRGDRTNTVIEPMLTDQWYLAMEGLAKQGLAVVASGKVRFVPENWTH 394
Query: 120 TWYQWLEN 127
+ QWLEN
Sbjct: 395 VYNQWLEN 402
>sp|Q4KHT9|SYV_PSEF5 Valine--tRNA ligase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=valS PE=3 SV=1
Length = 948
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 1 AVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY------------------GEFTG 42
VKI+P HD NDYEV +R NLPL+ +F++ ++ E+ G
Sbjct: 272 CVKITPAHDFNDYEVGKRHNLPLLNIFDKNAAVLPACQVFNLDGSLNDSVDGKIPAEYVG 331
Query: 43 MKRFDARTRVTEVLTEKGLYRGTVSHAMVVPLCSRSKDVVEPLLKPQWYVRTGEMAEKAV 102
+ RF+AR ++ GL HA+ VP RS V+EP L QWYV T +AE A+
Sbjct: 332 LDRFEARKQIVAAFDAAGLLVSVDDHALKVPKGDRSGTVIEPWLTDQWYVSTKPLAEPAI 391
Query: 103 QAVKTGELKIIPDHHTKTWYQWLEN 127
AV+ G + +P + ++ W+ +
Sbjct: 392 AAVEDGRIAFVPKQYENMYFSWMRD 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,223,423
Number of Sequences: 539616
Number of extensions: 2517908
Number of successful extensions: 8751
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 524
Number of HSP's that attempted gapping in prelim test: 7438
Number of HSP's gapped (non-prelim): 1398
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)