Your job contains 1 sequence.
>psy9533
MSFVWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPIPAEELKRKERARRQKKLMKS
LERQVGPLTTPIL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9533
(73 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026058 - symbol:OdsH "Ods-site homeobox" species:... 219 1.2e-17 1
ZFIN|ZDB-GENE-050714-1 - symbol:uncx4.1 "Unc4.1 homeobox ... 197 6.0e-15 1
UNIPROTKB|I3L874 - symbol:UNCX "Uncharacterized protein" ... 197 7.4e-15 1
UNIPROTKB|F1RIW6 - symbol:UNCX "Uncharacterized protein" ... 197 7.5e-15 1
MGI|MGI:108013 - symbol:Uncx "UNC homeobox" species:10090... 197 7.7e-15 1
RGD|69361 - symbol:Uncx "UNC homeobox" species:10116 "Rat... 197 7.7e-15 1
UNIPROTKB|P97830 - symbol:Uncx "Homeobox protein unc-4 ho... 197 7.7e-15 1
UNIPROTKB|A6NJT0 - symbol:UNCX "Homeobox protein unc-4 ho... 197 7.7e-15 1
FB|FBgn0024184 - symbol:unc-4 "unc-4" species:7227 "Droso... 195 7.8e-15 1
UNIPROTKB|E2R5H2 - symbol:UNCX "Uncharacterized protein" ... 197 8.0e-15 1
ZFIN|ZDB-GENE-990415-237 - symbol:rx2 "retinal homeobox g... 77 0.00054 2
UNIPROTKB|F1SMS6 - symbol:RAX "Uncharacterized protein" s... 75 0.00065 2
UNIPROTKB|F6Y5G1 - symbol:NKX6-3 "Uncharacterized protein... 85 0.00072 1
UNIPROTKB|Q7YRX0 - symbol:RAX2 "Retina and anterior neura... 87 0.00088 1
UNIPROTKB|Q96IS3 - symbol:RAX2 "Retina and anterior neura... 87 0.00088 1
UNIPROTKB|F1S7P4 - symbol:RAX2 "Uncharacterized protein" ... 87 0.00088 1
>FB|FBgn0026058 [details] [associations]
symbol:OdsH "Ods-site homeobox" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0032504 "multicellular organism
reproduction" evidence=IEP] [GO:0005615 "extracellular space"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005615 EMBL:AE014298
GO:GO:0043565 GO:GO:0032504 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P06601 GeneTree:ENSGT00700000104564
FlyBase:FBgn0026058 EMBL:BT022139 RefSeq:NP_523389.3
UniGene:Dm.2729 SMR:Q9VX20 STRING:Q9VX20 EnsemblMetazoa:FBtr0074461
GeneID:32758 KEGG:dme:Dmel_CG6352 UCSC:CG6352-RA CTD:32758
InParanoid:Q9VX20 OMA:TTHHEND GenomeRNAi:32758 NextBio:780212
Uniprot:Q9VX20
Length = 382
Score = 219 (82.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 39/65 (60%), Positives = 44/65 (67%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPIPXXXXXXXXXXXXXXXXMKSLER 63
VWFQNRRAKWRK+EHTKKGPGRPAHNAHP +CSGDPIP K+++R
Sbjct: 204 VWFQNRRAKWRKQEHTKKGPGRPAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDR 263
Query: 64 QVGPL 68
Q L
Sbjct: 264 QAKKL 268
>ZFIN|ZDB-GENE-050714-1 [details] [associations]
symbol:uncx4.1 "Unc4.1 homeobox (C. elegans)"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050714-1 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P06601 eggNOG:NOG283594 KO:K09328
EMBL:AY881012 EMBL:BC116499 IPI:IPI00502949 RefSeq:NP_001018616.2
UniGene:Dr.91587 ProteinModelPortal:Q50D79 GeneID:553947
KEGG:dre:553947 CTD:553947 HOGENOM:HOG000154780 InParanoid:Q50D79
OrthoDB:EOG4FBHVM NextBio:20880541 Uniprot:Q50D79
Length = 470
Score = 197 (74.4 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 147 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 183
>UNIPROTKB|I3L874 [details] [associations]
symbol:UNCX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104564
EMBL:CU928407 Ensembl:ENSSSCT00000029725 Uniprot:I3L874
Length = 518
Score = 197 (74.4 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 156 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 192
>UNIPROTKB|F1RIW6 [details] [associations]
symbol:UNCX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045595 "regulation
of cell differentiation" evidence=IEA] [GO:0035726 "common myeloid
progenitor cell proliferation" evidence=IEA] [GO:0021889 "olfactory
bulb interneuron differentiation" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0001502 "cartilage
condensation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045595
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001502 GO:GO:0007389 GO:GO:0021516
GeneTree:ENSGT00700000104564 OMA:MMDGRLL EMBL:CU928407
Ensembl:ENSSSCT00000008287 Uniprot:F1RIW6
Length = 523
Score = 197 (74.4 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 156 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 192
>MGI|MGI:108013 [details] [associations]
symbol:Uncx "UNC homeobox" species:10090 "Mus musculus"
[GO:0001502 "cartilage condensation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021516 "dorsal spinal cord development"
evidence=IMP] [GO:0021889 "olfactory bulb interneuron
differentiation" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0035726 "common myeloid progenitor cell
proliferation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:108013 GO:GO:0005634
GO:GO:0045595 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001502 GO:GO:0007389
GO:GO:0010468 GO:GO:0021889 HSSP:P06601 GO:GO:0021516 GO:GO:0035726
eggNOG:NOG283594 GeneTree:ENSGT00700000104564 KO:K09328
HOGENOM:HOG000154780 CTD:340260 HOVERGEN:HBG096185 OMA:MMDGRLL
EMBL:AJ001116 EMBL:AF247550 EMBL:BC051973 EMBL:Z96107 EMBL:AH006754
IPI:IPI00117219 RefSeq:NP_038730.1 UniGene:Mm.42190
ProteinModelPortal:O08934 SMR:O08934 STRING:O08934
PhosphoSite:O08934 PRIDE:O08934 Ensembl:ENSMUST00000031523
GeneID:22255 KEGG:mmu:22255 UCSC:uc009agv.1 InParanoid:O08934
NextBio:302335 Bgee:O08934 Genevestigator:O08934 Uniprot:O08934
Length = 530
Score = 197 (74.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 155 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 191
>RGD|69361 [details] [associations]
symbol:Uncx "UNC homeobox" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA;ISO] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0021516 "dorsal spinal cord
development" evidence=IEA;ISO] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035726 "common myeloid
progenitor cell proliferation" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045595
"regulation of cell differentiation" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:69361
GO:GO:0005634 GO:GO:0030154 GO:GO:0045595 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001502 GO:GO:0007389 HSSP:P06601 GO:GO:0021516
eggNOG:NOG283594 KO:K09328 HOGENOM:HOG000154780 CTD:340260
HOVERGEN:HBG096185 EMBL:D87748 IPI:IPI00208638 RefSeq:NP_058875.1
UniGene:Rn.10710 ProteinModelPortal:P97830 PRIDE:P97830 GeneID:29375
KEGG:rno:29375 UCSC:RGD:69361 InParanoid:P97830 NextBio:608943
Genevestigator:P97830 Uniprot:P97830
Length = 530
Score = 197 (74.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 155 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 191
>UNIPROTKB|P97830 [details] [associations]
symbol:Uncx "Homeobox protein unc-4 homolog" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:69361 GO:GO:0005634 GO:GO:0030154 GO:GO:0045595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001502 GO:GO:0007389 HSSP:P06601
GO:GO:0021516 eggNOG:NOG283594 KO:K09328 HOGENOM:HOG000154780
CTD:340260 HOVERGEN:HBG096185 EMBL:D87748 IPI:IPI00208638
RefSeq:NP_058875.1 UniGene:Rn.10710 ProteinModelPortal:P97830
PRIDE:P97830 GeneID:29375 KEGG:rno:29375 UCSC:RGD:69361
InParanoid:P97830 NextBio:608943 Genevestigator:P97830
Uniprot:P97830
Length = 530
Score = 197 (74.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 155 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 191
>UNIPROTKB|A6NJT0 [details] [associations]
symbol:UNCX "Homeobox protein unc-4 homolog" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001502 "cartilage
condensation" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0021889 "olfactory bulb interneuron
differentiation" evidence=IEA] [GO:0035726 "common myeloid
progenitor cell proliferation" evidence=IEA] [GO:0045595
"regulation of cell differentiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030154 GO:GO:0045595
GO:GO:0043565 EMBL:CH236953 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001502 GO:GO:0007389
GO:GO:0021516 eggNOG:NOG283594 KO:K09328 HOGENOM:HOG000154780
EMBL:AC073094 IPI:IPI00894170 RefSeq:NP_001073930.1
UniGene:Hs.232272 ProteinModelPortal:A6NJT0 SMR:A6NJT0
STRING:A6NJT0 PhosphoSite:A6NJT0 PRIDE:A6NJT0
Ensembl:ENST00000316333 GeneID:340260 KEGG:hsa:340260
UCSC:uc011jvw.2 CTD:340260 GeneCards:GC07P001272 HGNC:HGNC:33194
neXtProt:NX_A6NJT0 PharmGKB:PA162408642 HOVERGEN:HBG096185
InParanoid:A6NJT0 OMA:MMDGRLL GenomeRNAi:340260 NextBio:97758
Bgee:A6NJT0 CleanEx:HS_UNCX Genevestigator:A6NJT0 Uniprot:A6NJT0
Length = 531
Score = 197 (74.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 151 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 187
>FB|FBgn0024184 [details] [associations]
symbol:unc-4 "unc-4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 EMBL:AE014298
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 CTD:32757 eggNOG:NOG283594
GeneTree:ENSGT00700000104564 KO:K09328 EMBL:AF086820 EMBL:BT029145
RefSeq:NP_573242.1 UniGene:Dm.6603 ProteinModelPortal:O77215
SMR:O77215 MINT:MINT-314730 STRING:O77215 PRIDE:O77215
EnsemblMetazoa:FBtr0074460 GeneID:32757 KEGG:dme:Dmel_CG6269
FlyBase:FBgn0024184 InParanoid:O77215 OMA:PISMRRS OrthoDB:EOG4QFTWB
PhylomeDB:O77215 GenomeRNAi:32757 NextBio:780207 Bgee:O77215
GermOnline:CG6269 Uniprot:O77215
Length = 428
Score = 195 (73.7 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 37/65 (56%), Positives = 42/65 (64%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPIPXXXXXXXXXXXXXXXXMKSLER 63
VWFQNRRAK RK+EHTKKGPGRPAHNA P TCSG+PIP K+++R
Sbjct: 129 VWFQNRRAKVRKREHTKKGPGRPAHNAQPQTCSGEPIPPNELKAKERARRRKKLAKAIDR 188
Query: 64 QVGPL 68
Q L
Sbjct: 189 QARKL 193
>UNIPROTKB|E2R5H2 [details] [associations]
symbol:UNCX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045595
"regulation of cell differentiation" evidence=IEA] [GO:0035726
"common myeloid progenitor cell proliferation" evidence=IEA]
[GO:0021889 "olfactory bulb interneuron differentiation"
evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045595 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001502
GO:GO:0007389 GO:GO:0021516 GeneTree:ENSGT00700000104564
OMA:MMDGRLL EMBL:AAEX03004348 Ensembl:ENSCAFT00000018714
Uniprot:E2R5H2
Length = 538
Score = 197 (74.4 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPAHNAHPVTCSGDPI 40
VWFQNRRAKWRKKE+TKKGPGRPAHN+HP TCSG+P+
Sbjct: 155 VWFQNRRAKWRKKENTKKGPGRPAHNSHPTTCSGEPM 191
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 77 (32.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 4 VWFQNRRAKWRKKEHTKKG 22
VWFQNRRAKWR++E G
Sbjct: 181 VWFQNRRAKWRRQEKMDTG 199
Score = 35 (17.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 22 GPGR---PAHNAHP 32
GPG+ P + AHP
Sbjct: 251 GPGQSLQPTYTAHP 264
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 75 (31.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 12/14 (85%), Positives = 14/14 (100%)
Query: 4 VWFQNRRAKWRKKE 17
VWFQNRRAKWR++E
Sbjct: 183 VWFQNRRAKWRRQE 196
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 21 KGPGRPAHNAHPV-TCSGDPIP 41
+G G PA A P+ + G P+P
Sbjct: 230 EGSGGPAGGALPLESWLGPPLP 251
>UNIPROTKB|F6Y5G1 [details] [associations]
symbol:NKX6-3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009057 GO:GO:0003677 Gene3D:1.10.10.60
GeneTree:ENSGT00680000099625 Ensembl:ENSCAFT00000009208
EMBL:AAEX03010380 OMA:SASEVWF Uniprot:F6Y5G1
Length = 111
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 2 SFVWFQNRRAKWRKKEHTKKGPGRP 26
SFVWFQNRR KWRKK + P
Sbjct: 32 SFVWFQNRRTKWRKKSALEPSSSTP 56
>UNIPROTKB|Q7YRX0 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
GeneTree:ENSGT00700000104256 HOVERGEN:HBG021349 EMBL:AY211276
IPI:IPI00706984 RefSeq:NP_872594.1 UniGene:Bt.87576
ProteinModelPortal:Q7YRX0 SMR:Q7YRX0 STRING:Q7YRX0
Ensembl:ENSBTAT00000012858 GeneID:359713 KEGG:bta:359713 CTD:84839
eggNOG:NOG248147 InParanoid:Q7YRX0 KO:K09333 OMA:SFGPHAF
OrthoDB:EOG4V4387 NextBio:20812744 Uniprot:Q7YRX0
Length = 184
Score = 87 (35.7 bits), Expect = 0.00088, P = 0.00088
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPA 27
VWFQNRRAKWR++E + G G A
Sbjct: 73 VWFQNRRAKWRRQERLESGSGAVA 96
>UNIPROTKB|Q96IS3 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Orphanet:1872 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
EMBL:AC005777 HOVERGEN:HBG021349 CTD:84839 eggNOG:NOG248147
KO:K09333 OrthoDB:EOG4V4387 EMBL:AY211277 EMBL:BC007284
EMBL:BC018709 EMBL:BC032512 IPI:IPI00063781 RefSeq:NP_116142.1
UniGene:Hs.532691 ProteinModelPortal:Q96IS3 SMR:Q96IS3
STRING:Q96IS3 DMDM:74760880 PRIDE:Q96IS3 Ensembl:ENST00000395106
GeneID:84839 KEGG:hsa:84839 UCSC:uc002lyr.3 GeneCards:GC19M003769
HGNC:HGNC:18286 MIM:610362 MIM:610381 MIM:613757 neXtProt:NX_Q96IS3
PharmGKB:PA162400734 InParanoid:Q96IS3 PhylomeDB:Q96IS3
GenomeRNAi:84839 NextBio:75065 ArrayExpress:Q96IS3 Bgee:Q96IS3
CleanEx:HS_RAX2 Genevestigator:Q96IS3 Uniprot:Q96IS3
Length = 184
Score = 87 (35.7 bits), Expect = 0.00088, P = 0.00088
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPA 27
VWFQNRRAKWR++E + G G A
Sbjct: 73 VWFQNRRAKWRRQERLESGSGAVA 96
>UNIPROTKB|F1S7P4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:SFGPHAF EMBL:FP102497 Ensembl:ENSSSCT00000014739 Uniprot:F1S7P4
Length = 184
Score = 87 (35.7 bits), Expect = 0.00088, P = 0.00088
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 4 VWFQNRRAKWRKKEHTKKGPGRPA 27
VWFQNRRAKWR++E + G G A
Sbjct: 73 VWFQNRRAKWRRQERLESGSGAVA 96
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.452 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 73 57 0.00091 102 3 11 22 0.37 28
29 0.44 27
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 552 (59 KB)
Total size of DFA: 105 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 6.85u 0.08s 6.93t Elapsed: 00:00:04
Total cpu time: 6.86u 0.08s 6.94t Elapsed: 00:00:05
Start: Thu Aug 15 11:57:46 2013 End: Thu Aug 15 11:57:51 2013