BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9535
(593 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 180/310 (58%), Gaps = 31/310 (10%)
Query: 92 AFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXX 151
+F+F +L+ T+ F+ +P GNK+GEG FG VY G + N +AVK L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKL---------- 62
Query: 152 XXXTEAAMIPILL------FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSL 204
AAM+ I F+ E++ +++C+H NL+ LLG ++ + C+VY YM NGSL
Sbjct: 63 -----AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
Query: 205 YDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 264
DRL+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 175
Query: 265 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
DFG+ + SE +T+ + GT YM PEA+ +I+ K+D++S+GV+LLE++TG+ +
Sbjct: 176 DFGLARASEKF-AQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 325 DDNNT----ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRAS 380
D++ + + ++E + + +DK+ + + T VE + + +C +K+KR
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVA-SQCLHEKKNKRPD 293
Query: 381 MRDIVDLLSK 390
++ + LL +
Sbjct: 294 IKKVQQLLQE 303
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
L +L+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 175
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDI 559
DFG+ + SE +T+ + GT YM PEA+ +I+ K+D++S+G + + IT +
Sbjct: 176 DFGLARASEKF-AQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGV-VLLEIITGLPA 233
Query: 560 ADRER 564
D R
Sbjct: 234 VDEHR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 180/310 (58%), Gaps = 31/310 (10%)
Query: 92 AFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXX 151
+F+F +L+ T+ F+ +P GNK+GEG FG VY G + N +AVK L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKL---------- 62
Query: 152 XXXTEAAMIPILL------FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSL 204
AAM+ I F+ E++ +++C+H NL+ LLG ++ + C+VY YM NGSL
Sbjct: 63 -----AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
Query: 205 YDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 264
DRL+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 175
Query: 265 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
DFG+ + SE +T+ + GT YM PEA+ +I+ K+D++S+GV+LLE++TG+ +
Sbjct: 176 DFGLARASEKF-AQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 325 DDNNT----ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRAS 380
D++ + + ++E + + +DK+ + + T VE + + +C +K+KR
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVA-SQCLHEKKNKRPD 293
Query: 381 MRDIVDLLSK 390
++ + LL +
Sbjct: 294 IKKVQQLLQE 303
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
L +L+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 175
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDI 559
DFG+ + SE +T+ + GT YM PEA+ +I+ K+D++S+G + + IT +
Sbjct: 176 DFGLARASEKF-AQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGV-VLLEIITGLPA 233
Query: 560 ADRER 564
D R
Sbjct: 234 VDEHR 238
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 178/310 (57%), Gaps = 31/310 (10%)
Query: 92 AFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXX 151
+F+F +L+ T+ F+ +P GNK+GEG FG VY G + N +AVK L
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKL---------- 56
Query: 152 XXXTEAAMIPILL------FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSL 204
AAM+ I F+ E++ +++C+H NL+ LLG ++ + C+VY YM NGSL
Sbjct: 57 -----AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111
Query: 205 YDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 264
DRL+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 112 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 169
Query: 265 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
DFG+ + SE M + GT YM PEA+ +I+ K+D++S+GV+LLE++TG+ +
Sbjct: 170 DFGLARASEKFAQXVMXXR-IVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 228
Query: 325 DDNNT----ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRAS 380
D++ + + ++E + + +DK+ + + T VE + + +C +K+KR
Sbjct: 229 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVA-SQCLHEKKNKRPD 287
Query: 381 MRDIVDLLSK 390
++ + LL +
Sbjct: 288 IKKVQQLLQE 297
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
L +L+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 112 LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 169
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDI 559
DFG+ + SE M + GT YM PEA+ +I+ K+D++S+G + + IT +
Sbjct: 170 DFGLARASEKFAQXVM-XXRIVGTTAYMAPEALRGEITPKSDIYSFGV-VLLEIITGLPA 227
Query: 560 ADRER 564
D R
Sbjct: 228 VDEHR 232
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 174/310 (56%), Gaps = 31/310 (10%)
Query: 92 AFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXX 151
+F+F +L+ T+ F+ +P GNK GEG FG VY G + N +AVK L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKL---------- 53
Query: 152 XXXTEAAMIPILL------FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSL 204
AAM+ I F+ E++ ++C+H NL+ LLG ++ + C+VY Y NGSL
Sbjct: 54 -----AAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108
Query: 205 YDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 264
DRL+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 109 LDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 166
Query: 265 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
DFG+ + SE + + + GT Y PEA+ +I+ K+D++S+GV+LLE++TG+ +
Sbjct: 167 DFGLARASEKF-AQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAV 225
Query: 325 DDNNT----ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRAS 380
D++ + + ++E + + +DK+ + + T VE + +C +K+KR
Sbjct: 226 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVA-SQCLHEKKNKRPD 284
Query: 381 MRDIVDLLSK 390
++ + LL +
Sbjct: 285 IKKVQQLLQE 294
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
L +L+ ++ TPPL + R IA G A +++LH IHRD+KSAN+LLDE F K+
Sbjct: 109 LDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKIS 166
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDI 559
DFG+ + SE + + + GT Y PEA+ +I+ K+D++S+G + + IT +
Sbjct: 167 DFGLARASEKF-AQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGV-VLLEIITGLPA 224
Query: 560 ADRER 564
D R
Sbjct: 225 VDEHR 229
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 164/315 (52%), Gaps = 33/315 (10%)
Query: 86 YIGELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXX 145
++G+L F+ +L+ A+D F+ K N LG G FG VY G+L +G +AVK L+
Sbjct: 21 HLGQLKRFSLRELQVASDNFSNK------NILGRGGFGKVYKGRLADGTLVAVKRLK--- 71
Query: 146 XXXXXXXXXTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSL 204
E L F+ EV+ +S H NLLRL G C +VY YM NGS+
Sbjct: 72 ---------EERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
Query: 205 YDRL-ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSANVLLDENFVPK 262
L R + PPLD KR IALG A L YLH P IIHRDVK+AN+LLDE F
Sbjct: 123 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 182
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGM 321
+GDFG+ K+ + + + GT ++ PE + + S KTDVF YGV+LLEL+TG
Sbjct: 183 VGDFGLAKLMDYKDXHVXXA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 322 KPI-------DDNNTILYYYLVVEQEVPVREVLDKE-AGEWNETHVETLIGIVFEKCCVF 373
+ DD+ +L + + +E + ++D + G + + VE LI + C
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVAL-LCTQS 299
Query: 374 EKDKRASMRDIVDLL 388
+R M ++V +L
Sbjct: 300 SPMERPKMSEVVRML 314
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 445 RVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSANVLLDENFVPKLGDFGI 503
R + PPLD KR IALG A L YLH P IIHRDVK+AN+LLDE F +GDFG+
Sbjct: 129 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGAQI 549
K+ + + + GT ++ PE + + S KTDVF YG +
Sbjct: 189 AKLMDYKDXHVXXA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 233
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 162/315 (51%), Gaps = 33/315 (10%)
Query: 86 YIGELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXX 145
++G+L F+ +L+ A+D F K N LG G FG VY G+L +G +AVK L+
Sbjct: 13 HLGQLKRFSLRELQVASDNFXNK------NILGRGGFGKVYKGRLADGXLVAVKRLK--- 63
Query: 146 XXXXXXXXXTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSL 204
E L F+ EV+ +S H NLLRL G C +VY YM NGS+
Sbjct: 64 ---------EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
Query: 205 YDRL-ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSANVLLDENFVPK 262
L R + PPLD KR IALG A L YLH P IIHRDVK+AN+LLDE F
Sbjct: 115 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGM 321
+GDFG+ K+ + + + G ++ PE + + S KTDVF YGV+LLEL+TG
Sbjct: 175 VGDFGLAKLMDYKDXHVXXA--VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
Query: 322 KPI-------DDNNTILYYYLVVEQEVPVREVLDKE-AGEWNETHVETLIGIVFEKCCVF 373
+ DD+ +L + + +E + ++D + G + + VE LI + C
Sbjct: 233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVAL-LCTQS 291
Query: 374 EKDKRASMRDIVDLL 388
+R M ++V +L
Sbjct: 292 SPMERPKMSEVVRML 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 445 RVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSANVLLDENFVPKLGDFGI 503
R + PPLD KR IALG A L YLH P IIHRDVK+AN+LLDE F +GDFG+
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGAQI 549
K+ + + + G ++ PE + + S KTDVF YG +
Sbjct: 181 AKLMDYKDXHVXXA--VRGXIGHIAPEYLSTGKSSEKTDVFGYGVML 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 25/233 (10%)
Query: 95 FCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXX 154
DLE AT+ F+ K +G G FG VY G L++G ++A+K
Sbjct: 31 LVDLEEATNNFDHKFL------IGHGVFGKVYKGVLRDGAKVALKR-------------R 71
Query: 155 TEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVN- 212
T + I FE E++TLS C+H +L+ L+G C+ I +Y+YM NG+L L +
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
Query: 213 NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
T + +R I +G A LHYLH+ + IIHRDVKS N+LLDENFVPK+ DFGI K
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKG 189
Query: 273 ETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPI 324
T +T + GT Y+ PE + +++ K+DV+S+GV+L E+L I
Sbjct: 190 -TELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 449 TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 508
T + +R I +G A LHYLH+ + IIHRDVKS N+LLDENFVPK+ DFGI K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKG- 189
Query: 509 TSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
T +T + GT Y+ PE + +++ K+DV+S+G
Sbjct: 190 TELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 25/233 (10%)
Query: 95 FCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXX 154
DLE AT+ F+ K +G G FG VY G L++G ++A+K
Sbjct: 31 LVDLEEATNNFDHKFL------IGHGVFGKVYKGVLRDGAKVALKR-------------R 71
Query: 155 TEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVN- 212
T + I FE E++TLS C+H +L+ L+G C+ I +Y+YM NG+L L +
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
Query: 213 NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
T + +R I +G A LHYLH+ + IIHRDVKS N+LLDENFVPK+ DFGI K
Sbjct: 132 PTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKG 189
Query: 273 ETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPI 324
T +T + GT Y+ PE + +++ K+DV+S+GV+L E+L I
Sbjct: 190 -TELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 449 TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 508
T + +R I +G A LHYLH+ + IIHRDVKS N+LLDENFVPK+ DFGI K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKG- 189
Query: 509 TSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
T +T + GT Y+ PE + +++ K+DV+S+G
Sbjct: 190 TELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+G G FGTV+ + +G ++AVK L F EV + +
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE-----------FLREVAIMKRL 91
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++ +G N IV EY+ GSLY L + LD +R S+A VA+ ++
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH+ + PI+HRD+KS N+L+D+ + K+ DFG+ ++ + + ++ GT +M P
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX---FLXSKXAAGTPEWMAP 208
Query: 295 EAMHCQIST-KTDVFSYGVILLELLTGMKPIDDNNTILYYYLV----VEQEVPVREVLDK 349
E + + S K+DV+S+GVIL EL T +P + N V E+P
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP------- 261
Query: 350 EAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLL 388
++ + + E C E KR S I+DLL
Sbjct: 262 -------RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD +R S+A VA+ ++YLH+ + PI+HRD+KS N+L+D+ + K+ DFG+ ++ +
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX- 192
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYG 546
+ ++ GT +M PE + + S K+DV+S+G
Sbjct: 193 --FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+G G FGTV+ + +G ++AVK L F EV + +
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE-----------FLREVAIMKRL 91
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++ +G N IV EY+ GSLY L + LD +R S+A VA+ ++
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH+ + PI+HR++KS N+L+D+ + K+ DFG+ ++ ++ + +++ GT +M P
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS---SKSAAGTPEWMAP 208
Query: 295 EAMHCQIST-KTDVFSYGVILLELLTGMKPIDDNNTILYYYLV----VEQEVPVREVLDK 349
E + + S K+DV+S+GVIL EL T +P + N V E+P
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP------- 261
Query: 350 EAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLL 388
++ + + E C E KR S I+DLL
Sbjct: 262 -------RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD +R S+A VA+ ++YLH+ + PI+HR++KS N+L+D+ + K+ DFG+ ++ ++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST- 192
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYG 546
+ +++ GT +M PE + + S K+DV+S+G
Sbjct: 193 --FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 18 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 64
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 65 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 122
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 123 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 179
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 225
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 110 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 168 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 15 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 61
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 62 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 119
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 120 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 176
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 222
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 107 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 165 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 198
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 40 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 86
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 87 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 144
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 145 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 201
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 247
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 132 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 190 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 41 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 87
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 88 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 145
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 146 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 202
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 248
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 133 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 191 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 18 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 64
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 65 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 122
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 123 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 179
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 225
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 110 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 168 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 13 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 59
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 60 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 118 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 174
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 105 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 163 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 27/227 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 41 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 87
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 88 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 145
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGTRPYM 292
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 146 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 201
Query: 293 PPEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 248
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S
Sbjct: 133 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGS 188
Query: 516 YT-ENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 27/227 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 33 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 79
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 80 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 137
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGTRPYM 292
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 138 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 193
Query: 293 PPEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 240
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S
Sbjct: 125 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGS 180
Query: 516 YT-ENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 181 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 27/227 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 13 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 59
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 60 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGTRPYM 292
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 118 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 173
Query: 293 PPEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S
Sbjct: 105 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGS 160
Query: 516 YT-ENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 25/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 13 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 59
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A+ +
Sbjct: 60 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGM 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 118 DYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 174
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
PE + Q S ++DV+++G++L EL+TG P I++ + I++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 456 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM 515
K IA A+ + YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + +
Sbjct: 105 KLIDIARQTAQGMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 516 YTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYG 546
+ E L+G+ +M PE + Q S ++DV+++G
Sbjct: 163 F-EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 17 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 63
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A +
Sbjct: 64 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGM 121
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 122 DYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 178
Query: 294 PEAMHCQ----ISTKTDVFSYGVILLELLTGMKPIDDNN 328
PE + Q S ++DV+++G++L EL+TG P + N
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 409 RTQENNNINWELHYTGIPVIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEAL 468
R + NI + Y+ P + + T + L+ + T + K IA A +
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGM 121
Query: 469 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMP 528
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ + + + E L+G+ +M
Sbjct: 122 DYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF-EQLSGSILWMA 178
Query: 529 PEAMHCQ----ISTKTDVFSYG 546
PE + Q S ++DV+++G
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFG 200
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 24/220 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 75
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A +
Sbjct: 76 KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGM 133
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGTRPYM 292
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 134 DYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 189
Query: 293 PPEAMHCQ----ISTKTDVFSYGVILLELLTGMKPIDDNN 328
PE + Q S ++DV+++G++L EL+TG P + N
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 409 RTQENNNINWELHYTGIPVIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEAL 468
R + NI + Y+ P + + T + L+ + T + K IA A +
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGM 133
Query: 469 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYT-ENLTGTRPYM 527
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 134 DYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 189
Query: 528 PPEAMHCQ----ISTKTDVFSYG 546
PE + Q S ++DV+++G
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFG 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 24/220 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G ++G G FGTVY GK ++AVK L T + F+NEV L
Sbjct: 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNV-----------TAPTPQQLQAFKNEVGVLR 75
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ +HVN+L +G IV ++ SLY L + + K IA A +
Sbjct: 76 KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGM 133
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGTRPYM 292
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 134 DYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 189
Query: 293 PPEAMHCQ----ISTKTDVFSYGVILLELLTGMKPIDDNN 328
PE + Q S ++DV+++G++L EL+TG P + N
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 409 RTQENNNINWELHYTGIPVIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEAL 468
R + NI + Y+ P + + T + L+ + T + K IA A +
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGM 133
Query: 469 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYT-ENLTGTRPYM 527
YLH+ K IIHRD+KS N+ L E+ K+GDFG+ +E S + E L+G+ +M
Sbjct: 134 DYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWM 189
Query: 528 PPEAMHCQ----ISTKTDVFSYG 546
PE + Q S ++DV+++G
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFG 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
++G G FGTVY GK ++AVK L+ + F NEV L +
Sbjct: 43 RIGSGSFGTVYKGKWHG--DVAVKILKV-----------VDPTPEQFQAFRNEVAVLRKT 89
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+HVN+L +G IV ++ SLY L V T + IA A+ + Y
Sbjct: 90 RHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHL-HVQETK-FQMFQLIDIARQTAQGMDY 147
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
LH+ K IIHRD+KS N+ L E K+GDFG+ + + + E TG+ +M PE
Sbjct: 148 LHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS-GSQQVEQPTGSVLWMAPE 204
Query: 296 AMHCQ----ISTKTDVFSYGVILLELLTGMKP---IDDNNTILY 332
+ Q S ++DV+SYG++L EL+TG P I++ + I++
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF 248
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 15/111 (13%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
IA A+ + YLH+ K IIHRD+KS N+ L E K+GDFG+ + + + E
Sbjct: 137 IARQTAQGMDYLHA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS-GSQQVEQ 193
Query: 520 LTGTRPYMPPEAMHCQ----ISTKTDVFSYG--------AQIKTQHITNVD 558
TG+ +M PE + Q S ++DV+SYG ++ HI N D
Sbjct: 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G G FG V K + ++A+K +E F E++ LS+
Sbjct: 17 VGRGAFGVVCKAKWR-AKDVAIKQIESESERKA---------------FIVELRQLSRVN 60
Query: 177 HVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYL 236
H N+++L G C N + C+V EY GSLY+ L P + S L ++ + YL
Sbjct: 61 HPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 237 HSLS-KPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
HS+ K +IHRD+K N+LL V K+ DFG +++T T N G+ +M P
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHMTNN-KGSAAWMAP 173
Query: 295 EAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ---EVPVREVLDKE 350
E S K DVFS+G+IL E++T KP D+ + + P+ + L K
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 233
Query: 351 AGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLLSKSM 392
+E+L+ +C + +R SM +IV +++ M
Sbjct: 234 --------IESLM----TRCWSKDPSQRPSMEEIVKIMTHLM 263
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 459 SIALGVAEALHYLHSLS-KPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNVKTMY 516
S L ++ + YLHS+ K +IHRD+K N+LL V K+ DFG +++T
Sbjct: 107 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHM 161
Query: 517 TENLTGTRPYMPPEAMH-CQISTKTDVFSYG 546
T N G+ +M PE S K DVFS+G
Sbjct: 162 TNN-KGSAAWMAPEVFEGSNYSEKCDVFSWG 191
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G G FG V K + ++A+K +E F E++ LS+
Sbjct: 16 VGRGAFGVVCKAKWR-AKDVAIKQIESESERKA---------------FIVELRQLSRVN 59
Query: 177 HVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYL 236
H N+++L G C N + C+V EY GSLY+ L P + S L ++ + YL
Sbjct: 60 HPNIVKLYGACLNPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 237 HSLS-KPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
HS+ K +IHRD+K N+LL V K+ DFG +++T T N G+ +M P
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHMTNN-KGSAAWMAP 172
Query: 295 EAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ---EVPVREVLDKE 350
E S K DVFS+G+IL E++T KP D+ + + P+ + L K
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 232
Query: 351 AGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLLSKSM 392
+E+L+ +C + +R SM +IV +++ M
Sbjct: 233 --------IESLM----TRCWSKDPSQRPSMEEIVKIMTHLM 262
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 459 SIALGVAEALHYLHSLS-KPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNVKTMY 516
S L ++ + YLHS+ K +IHRD+K N+LL V K+ DFG +++T
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHM 160
Query: 517 TENLTGTRPYMPPEAMH-CQISTKTDVFSYG 546
T N G+ +M PE S K DVFS+G
Sbjct: 161 TNN-KGSAAWMAPEVFEGSNYSEKCDVFSWG 190
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 115/219 (52%), Gaps = 25/219 (11%)
Query: 117 LGEGQFGTVYYGKLKNGME----IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ +EA++ +
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI------------M 69
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q +H N++RL G+ N M I+ E+M NG+L D R+N+ + + G+A
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQ-FTVIQLVGMLRGIAS 127
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL +S +HRD+ + N+L++ N V K+ DFG+ + E ++ YT +L G P
Sbjct: 128 GMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 291 -YMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + ++ +D +SYG+++ E+++ G +P D
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL +S +HRD+ + N+L++ N V K+ DFG+ + E ++ YT +L G
Sbjct: 124 GIASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 523 TRP--YMPPEAMHCQ-ISTKTDVFSYG 546
P + PEA+ + ++ +D +SYG
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYG 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + + I A+K L E A + L EV+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVL---------FKTQLEKAGVEHQL-RREVEIQ 66
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELAN 123
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL N K+ DFG + +S T L GT Y
Sbjct: 124 ALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-----LCGTLDY 176
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
+PPE + ++ K D++S GV+ E L GM P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 439 QLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 498
+L KL+R D + + +A AL Y HS K +IHRD+K N+LL N K+
Sbjct: 102 ELQKLSR------FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSNGELKI 153
Query: 499 GDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
DFG + +S T L GT Y+PPE + ++ K D++S G
Sbjct: 154 ADFGWSVHAPSSRRDT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + + I A+K L E A + L EV+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVL---------FKTQLEKAGVEHQL-RREVEIQ 66
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELAN 123
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL N K+ DFG + +S T L GT Y
Sbjct: 124 ALSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT-----LCGTLDY 176
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
+PPE + ++ K D++S GV+ E L GM P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 439 QLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 498
+L KL+R D + + +A AL Y HS K +IHRD+K N+LL N K+
Sbjct: 102 ELQKLSR------FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSNGELKI 153
Query: 499 GDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
DFG + +S T L GT Y+PPE + ++ K D++S G
Sbjct: 154 ADFGWSVHAPSSRRTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 71
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 72 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + YT P +
Sbjct: 131 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTA 184
Query: 294 PEAM-HCQISTKTDVFSYGVILLELLT 319
PEA+ + + K+DV+S+G++L E++T
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVT 211
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
Query: 512 VKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
YT P + PEA+ + + K+DV+S+G
Sbjct: 170 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 71 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + YT P +
Sbjct: 130 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTA 183
Query: 294 PEAM-HCQISTKTDVFSYGVILLELLT 319
PEA+ + + K+DV+S+G++L E++T
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVT 210
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 111 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 168
Query: 512 VKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
YT P + PEA+ + + K+DV+S+G
Sbjct: 169 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 202
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 65
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 66 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + YT P +
Sbjct: 125 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTA 178
Query: 294 PEAM-HCQISTKTDVFSYGVILLELLT 319
PEA+ + + K+DV+S+G++L E++T
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
Query: 512 VKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
YT P + PEA+ + + K+DV+S+G
Sbjct: 164 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 75
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 76 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + YT P +
Sbjct: 135 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTA 188
Query: 294 PEAM-HCQISTKTDVFSYGVILLELLT 319
PEA+ + + K+DV+S+G++L E++T
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVT 215
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 116 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 173
Query: 512 VKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
YT P + PEA+ + + K+DV+S+G
Sbjct: 174 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 60
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 61 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + YT P +
Sbjct: 120 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTA 173
Query: 294 PEAM-HCQISTKTDVFSYGVILLELLT 319
PEA+ + + K+DV+S+G++L E++T
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVT 200
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 101 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 158
Query: 512 VKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
YT P + PEA+ + + K+DV+S+G
Sbjct: 159 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 192
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 67
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G +Y L +++ D + + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELAN 124
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 125 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 177
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 110 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 168 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 63
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 120
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L+GT Y
Sbjct: 121 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT-----LSGTLDY 173
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 106 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR 163
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L+GT Y+PPE + ++ K D++S G
Sbjct: 164 RTT-----LSGTLDYLPPEMIEGRMHDEKVDLWSLG 194
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 236
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 237 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 296 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 349
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTT 376
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 285 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 338
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 236
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 237 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 296 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 349
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTT 376
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 285 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 338
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 319
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 320 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 378
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 379 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 432
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTT 459
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 368 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 421
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++A+KTL+ M P E E Q + +
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLK-------------PGTMSPESFLE-EAQIMKKL 61
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRL----ARVNNTPPLDSNKRYSIALGVAE 231
KH L++L + + IV EYM GSL D L R P L +A VA
Sbjct: 62 KHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL-----VDMAAQVAA 116
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ Y+ ++ IHRD++SAN+L+ + K+ DFG+ ++ E N T +
Sbjct: 117 GMAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWT 173
Query: 292 MPPEAMHCQISTKTDVFSYGVILLELLT 319
P A++ + + K+DV+S+G++L EL+T
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVT 201
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A VA + Y+ ++ IHRD++SAN+L+ + K+ DFG+ ++ E N T
Sbjct: 110 MAAQVAAGMAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGA 166
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P A++ + + K+DV+S+G
Sbjct: 167 KFPIKWTAPEAALYGRFTIKSDVWSFG 193
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 79
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 136
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 137 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 189
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 122 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 179
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 180 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 26/221 (11%)
Query: 116 KLGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL-FENEVQTLS 173
++G+G FG V+ G+L K+ +A+K+L E MI F+ EV +S
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSL-------ILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++L GL +N +V E++ G LY RL ++ P+ + + + L +A +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR-MVMEFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGI 135
Query: 234 HYLHSLSKPIIHRDVKSANVL---LDEN--FVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
Y+ + + PI+HRD++S N+ LDEN K+ DFG TS L G
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------TSQQSVHSVSGLLGN 189
Query: 289 RPYMPPEAMHCQ---ISTKTDVFSYGVILLELLTGMKPIDD 326
+M PE + + + K D +S+ +IL +LTG P D+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL---LDEN--FVPKLGDFGIVK 505
P+ + + + L +A + Y+ + + PI+HRD++S N+ LDEN K+ DFG
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG--- 174
Query: 506 MSETSNVKTMYTENLTGTRPYMPPEAMHCQ---ISTKTDVFSYGAQIKT 551
TS L G +M PE + + + K D +S+ + T
Sbjct: 175 ---TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT 220
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 66
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 67 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 126 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 181
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVT 206
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 107 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 164
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 165 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 198
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 65
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 66 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 125 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 180
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVT 205
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 164 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 74 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 133 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 188
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVT 213
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 114 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 172 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 67
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 68 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 127 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 182
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVT 207
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 108 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 165
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 166 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 199
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 88
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 145
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 146 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 198
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 131 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 188
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 189 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 65
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 66 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 125 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 180
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVT 205
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 164 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 71
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 72 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 131 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 186
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVT 211
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 170 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 236
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 237 RHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 296 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 349
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTT 376
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 285 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 338
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQFG VY G K + +AVKTL+ + + F E +
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 62
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 121
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T + +
Sbjct: 122 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 293 PPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
P + + S K+DV+++GV+L E+ T GM P
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T +
Sbjct: 114 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGA 170
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P + + S K+DV+++G
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFG 197
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-------------GTMSP-EAFLQEAQVMKKL 63
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 64 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 122
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 123 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 176
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 177 PEAALYGRFTIKSDVWSFGILLTELTT 203
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 112 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 165
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 166 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 123 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 175
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 108 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 166 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 63
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 120
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 121 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-----LCGTLDY 173
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 106 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 164 RDT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + KN I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 120 ALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-----LCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 163 RAA-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 75 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 134 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA--REGAKFPIKWTAPE 189
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVT 214
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 115 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 172
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
E + PEA+ + + K+DV+S+G
Sbjct: 173 XTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 67
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 124
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 125 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 177
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 110 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 168 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 123 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 175
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 108 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 166 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 26/221 (11%)
Query: 116 KLGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL-FENEVQTLS 173
++G+G FG V+ G+L K+ +A+K+L E MI F+ EV +S
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSL-------ILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++L GL +N +V E++ G LY RL ++ P+ + + + L +A +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR-MVMEFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGI 135
Query: 234 HYLHSLSKPIIHRDVKSANVL---LDEN--FVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
Y+ + + PI+HRD++S N+ LDEN K+ DFG+ + S S L G
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------VSGLLGN 189
Query: 289 RPYMPPEAMHCQ---ISTKTDVFSYGVILLELLTGMKPIDD 326
+M PE + + + K D +S+ +IL +LTG P D+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL---LDEN--FVPKLGDFGIVK 505
P+ + + + L +A + Y+ + + PI+HRD++S N+ LDEN K+ DFG+ +
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
Query: 506 MSETSNVKTMYTENLTGTRPYMPPEAMHCQ---ISTKTDVFSYGAQIKT 551
S S L G +M PE + + + K D +S+ + T
Sbjct: 178 QSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 88
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 145
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S ++L GT Y
Sbjct: 146 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDDLCGTLDY 198
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 131 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 188
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
++L GT Y+PPE + ++ K D++S G
Sbjct: 189 -----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 61
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 118
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 119 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 171
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 209
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 104 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 161
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 162 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 192
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 67
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G +Y L +++ D + + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELAN 124
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 125 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-----LXGTLDY 177
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 110 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 168 -----RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 163 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 67
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 124
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 125 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 177
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + + K D++S GV+ E L G P + N
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 110 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + + K D++S G
Sbjct: 168 RTT-----LCGTLDYLPPEXIEGRXHDEKVDLWSLG 198
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 83
Query: 174 QCKHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C IV EYM G+L D L R N + + +A ++ A
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSA 142
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN V K+ DFG+ ++ YT + P
Sbjct: 143 MEYLEK--KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT----YTAHAGAKFPIK 196
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + S K+DV+++GV+L E+ T GM P
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN V K+ DFG+ ++ YT +
Sbjct: 135 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT----YTAH 188
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYGA---QIKTQHITNVDIADRERYYSL 568
P + PE++ + S K+DV+++G +I T ++ D + Y L
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDL 243
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 66
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 123
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 124 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 176
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 214
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 109 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 166
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 167 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 69
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 129 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 182
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 121 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 174
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S ++L GT Y
Sbjct: 123 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDDLCGTLDY 175
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 108 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
++L GT Y+PPE + ++ K D++S G
Sbjct: 166 -----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-------------GTMSP-EAFLQEAQVMKKL 60
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 61 RHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E N T + P
Sbjct: 120 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEA 176
Query: 296 AMHCQISTKTDVFSYGVILLELLT 319
A++ + + K+DV+S+G++L EL T
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTT 200
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E N T
Sbjct: 109 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGA 165
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P A++ + + K+DV+S+G
Sbjct: 166 KFPIKWTAPEAALYGRFTIKSDVWSFG 192
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 66
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 125
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 126 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 179
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 118 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 171
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 201
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 66
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 125
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 126 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 179
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 118 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 171
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 201
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKI 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 69
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 129 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 182
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 121 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 174
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 69
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 129 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 182
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 121 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 174
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 77
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 136
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 137 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 190
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 129 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 182
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 59
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 116
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S T L GT Y
Sbjct: 117 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-----LCGTLDY 169
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 207
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 102 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 159
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 160 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 190
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 65
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 124
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T + +
Sbjct: 125 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 181
Query: 293 PPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
P + + S K+DV+++GV+L E+ T GM P
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T +
Sbjct: 117 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGA 173
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P + + S K+DV+++G
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFG 200
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-------------GTMSP-EAFLQEAQVMKKL 61
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 62 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 121 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 174
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELTT 201
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 110 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 163
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 64
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 124 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 177
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 116 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 169
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 59
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 60 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 119 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 172
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 173 PEAALYGRFTIKSDVWSFGILLTELTT 199
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 108 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 161
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 162 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 68
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 127
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 128 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 181
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 120 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 173
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 203
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 64
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 124 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 177
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 116 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 169
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 64
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 124 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 177
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 116 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 169
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 25/219 (11%)
Query: 117 LGEGQFGTVYYGKLKNGME----IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ +EA++ +
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI------------M 71
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q +H N++RL G+ N M I+ E+M NG+L D R+N+ + + G+A
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQ-FTVIQLVGMLRGIAS 129
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL +S +HRD+ + N+L++ N V K+ DFG+ + E ++ T +L G P
Sbjct: 130 GMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 291 -YMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + ++ +D +SYG+++ E+++ G +P D
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 226
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL +S +HRD+ + N+L++ N V K+ DFG+ + E ++ T +L G
Sbjct: 126 GIASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 523 TRP--YMPPEAMHCQ-ISTKTDVFSYG 546
P + PEA+ + ++ +D +SYG
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYG 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 64
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 124 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 177
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 116 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 169
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQFG V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 61
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 62 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ + IHR++++AN+L+ + K+ DFG+ ++ E + YT P +
Sbjct: 121 IEE--RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTA 174
Query: 294 PEAM-HCQISTKTDVFSYGVILLELLT 319
PEA+ + + K+DV+S+G++L E++T
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVT 201
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHR++++AN+L+ + K+ DFG+ ++ E +
Sbjct: 102 LTINKLLDMAAQIAEGMAFIEE--RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE 159
Query: 512 VKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
YT P + PEA+ + + K+DV+S+G
Sbjct: 160 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 193
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 69
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 129 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 182
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 121 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 174
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 64
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 124 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 177
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 116 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 169
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 67
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 124
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S +L GT Y
Sbjct: 125 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-----DLCGTLDY 177
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 110 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+L GT Y+PPE + ++ K D++S G
Sbjct: 168 -----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 69
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T + +
Sbjct: 129 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 185
Query: 293 PPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
P + + S K+DV+++GV+L E+ T GM P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T +
Sbjct: 121 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGA 177
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P + + S K+DV+++G
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFG 204
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 62
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 121
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T + +
Sbjct: 122 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 293 PPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
P + + S K+DV+++GV+L E+ T GM P
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T +
Sbjct: 114 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGA 170
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P + + S K+DV+++G
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFG 197
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 63
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 120
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S +L GT Y
Sbjct: 121 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-----DLCGTLDY 173
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 106 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+L GT Y+PPE + ++ K D++S G
Sbjct: 164 -----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 64
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 124 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 177
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 116 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 169
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S +L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-----DLCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+L GT Y+PPE + ++ K D++S G
Sbjct: 163 -----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S +L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-----DLCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+L GT Y+PPE + ++ K D++S G
Sbjct: 163 -----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E N T + P
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEA 186
Query: 296 AMHCQISTKTDVFSYGVILLELLT 319
A++ + + K+DV+S+G++L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E N T
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGA 175
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P A++ + + K+DV+S+G
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-----LCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 163 RAA-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 64
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 121
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 122 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-----LCGTLDY 174
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 107 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 164
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 165 -----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 84
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 142
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 143 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAKL 198
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 243
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 136 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVH 191
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 123 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-----LCGTLDY 175
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 108 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 166 RAA-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 66
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 125
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT P
Sbjct: 126 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAPAGAKFPIK 179
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT
Sbjct: 118 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAP 171
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 201
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 65
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 124
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT P
Sbjct: 125 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAPAGAKFPIK 178
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ YT
Sbjct: 117 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAP 170
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 200
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 64
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 121
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ +FG + +S T L GT Y
Sbjct: 122 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT-----LCGTLDY 174
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ +FG + +S
Sbjct: 107 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR 164
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 165 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 123 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-----LCGTLDY 175
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 108 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 166 -----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-----ELCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDN 327
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 163 -----RTELCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+ +AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+ +AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-----LCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 163 -----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 62
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 121
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T + +
Sbjct: 122 MEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTA 178
Query: 293 PPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
P + + S K+DV+++GV+L E+ T GM P
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHRD+ + N L+ EN + K+ DFG+ ++ T + T +
Sbjct: 114 MATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGA 170
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ P + + S K+DV+++G
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFG 197
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ DFG + +S L GT Y
Sbjct: 120 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX-----LCGTLDY 172
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ DFG + +S
Sbjct: 105 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
L GT Y+PPE + ++ K D++S G
Sbjct: 163 -----RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGNMSP-EAFLQEAQVMKKL 237
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYD----RLARVNNTPPLDSNKRYSIALGVAE 231
+H L++L + + IV EYM GSL D + + P L +A +A
Sbjct: 238 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIAS 292
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P
Sbjct: 293 GMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNE----YTARQGAKFPI 346
Query: 291 -YMPPE-AMHCQISTKTDVFSYGVILLELLT 319
+ PE A++ + + K+DV+S+G++L EL T
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 286 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNE----YTAR 339
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 340 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 369
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-------------GTMSP-EAFLQEAQVMKKL 67
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + ++ +A + Y
Sbjct: 68 RHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 127 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 180
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTT 207
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 120 IASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAK 173
Query: 524 RP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFG 199
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K I A+K L E A + L EV+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVL---------FKAQLEKAGVEHQL-RREVEIQ 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LRL G ++ ++ EY G++Y L +++ D + + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELAN 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y HS K +IHRD+K N+LL K+ +FG + +S T L GT Y
Sbjct: 123 ALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT-----LCGTLDY 175
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNN 328
+PPE + ++ K D++S GV+ E L G P + N
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A AL Y HS K +IHRD+K N+LL K+ +FG + +S
Sbjct: 108 FDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
T L GT Y+PPE + ++ K D++S G
Sbjct: 166 RTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 83
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 141
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 142 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 197
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 242
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 135 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 190
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 85
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 143
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 144 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 199
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 137 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 192
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 84
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 142
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 143 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 198
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 243
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 136 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 191
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 103
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 104 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 161
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 162 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 217
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 262
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 155 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 210
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 211 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 243
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 85
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 143
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 144 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 199
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 137 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 192
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 82
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 140
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 141 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 196
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 241
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 134 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 189
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 80
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 81 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 138
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 139 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 194
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 239
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 132 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 187
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
YL SK +HRD+ + N L+++ V K+ DFG+ + + YT ++ P +
Sbjct: 118 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRW 171
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLT 319
PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + + YT ++
Sbjct: 113 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSK 166
Query: 524 RP--YMPPEA-MHCQISTKTDVFSYGA 547
P + PPE M+ + S+K+D++++G
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGV 193
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 116 KLGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL-FENEVQTLS 173
++G+G FG V+ G+L K+ +A+K+L E MI F+ EV +S
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSL-------ILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++L GL +N +V E++ G LY RL ++ P+ + + + L +A +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR-MVMEFVPCGDLYHRL--LDKAHPIKWSVKLRLMLDIALGI 135
Query: 234 HYLHSLSKPIIHRDVKSANVL---LDEN--FVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
Y+ + + PI+HRD++S N+ LDEN K+ DF + + S S L G
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS------VSGLLGN 189
Query: 289 RPYMPPEAMHCQ---ISTKTDVFSYGVILLELLTGMKPIDD 326
+M PE + + + K D +S+ +IL +LTG P D+
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL---LDEN--FVPKLGDFGIVK 505
P+ + + + L +A + Y+ + + PI+HRD++S N+ LDEN K+ DF + +
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
Query: 506 MSETSNVKTMYTENLTGTRPYMPPEAMHCQ---ISTKTDVFSYGAQIKT 551
S S L G +M PE + + + K D +S+ + T
Sbjct: 178 QSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT 220
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM G L D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V+ G N ++AVKTL+ + + F E +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLK--------------PGTMSVQAFLEEANLMKT 64
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+H L+RL + I+ EYM GSL D L + + + K + +AE +
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
Y+ K IHRD+++ANVL+ E+ + K+ DFG+ ++ E + YT P +
Sbjct: 124 AYIER--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE----YTAREGAKFPIKW 177
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT 319
PEA++ T K+DV+S+G++L E++T
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVT 206
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+AE + Y+ K IHRD+++ANVL+ E+ + K+ DFG+ ++ E + YT
Sbjct: 119 IAEGMAYIER--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE----YTAREGAK 172
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P + PEA++ T K+DV+S+G
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFG 198
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-------------PGTMSP-EAFLQEAQVMKKL 70
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM G L D L + L + +A +A + Y
Sbjct: 71 RHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMP 293
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT P +
Sbjct: 130 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTARQGAKFPIKWTA 183
Query: 294 PE-AMHCQISTKTDVFSYGVILLELLT 319
PE A++ + + K+DV+S+G++L EL T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A +A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + YT
Sbjct: 119 MAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----YTAR 172
Query: 520 LTGTRP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG GQ G V+ G ++AVK+L+ + +M P F E + Q
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLK-------------QGSMSPDA-FLAEANLMKQL 65
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L+RL + I+ EYM NGSL D L + + L NK +A +AE + +
Sbjct: 66 QHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
+ + IHRD+++AN+L+ + K+ DFG+ ++ E + E + PE
Sbjct: 125 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTA--REGAKFPIKWTAPE 180
Query: 296 AM-HCQISTKTDVFSYGVILLELLT 319
A+ + + K+DV+S+G++L E++T
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVT 205
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L NK +A +AE + ++ + IHRD+++AN+L+ + K+ DFG+ ++ E +
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIE--D 161
Query: 512 VKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
+ E + PEA+ + + K+DV+S+G
Sbjct: 162 AEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 104
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 105 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 162
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 163 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 218
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 263
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 156 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 211
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 212 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 244
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 77
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 78 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 135
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + + N TG +
Sbjct: 136 KGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKL 191
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 236
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + YL SK +HRD+ + N +LDE F K+ DFG+ + + + +
Sbjct: 129 GFGLQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVH 184
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 185 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 217
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 55
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 113
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
YL SK +HRD+ + N L+++ V K+ DFG+ + + YT ++ P +
Sbjct: 114 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRW 167
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLT 319
PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + + YT ++
Sbjct: 109 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSK 162
Query: 524 RP--YMPPEA-MHCQISTKTDVFSYGA 547
P + PPE M+ + S+K+D++++G
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGV 189
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 75
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 133
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
YL SK +HRD+ + N L+++ V K+ DFG+ + + YT ++ P +
Sbjct: 134 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRW 187
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLT 319
PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + + YT ++
Sbjct: 129 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSK 182
Query: 524 RP--YMPPEA-MHCQISTKTDVFSYG 546
P + PPE M+ + S+K+D++++G
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFG 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 66
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 124
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
YL SK +HRD+ + N L+++ V K+ DFG+ + + YT ++ P +
Sbjct: 125 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRW 178
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLT 319
PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + + YT ++
Sbjct: 120 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSK 173
Query: 524 RP--YMPPEA-MHCQISTKTDVFSYGA 547
P + PPE M+ + S+K+D++++G
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGV 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 60
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 118
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
YL SK +HRD+ + N L+++ V K+ DFG+ + + YT ++ P +
Sbjct: 119 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRW 172
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLT 319
PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + + YT ++
Sbjct: 114 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSK 167
Query: 524 RP--YMPPEA-MHCQISTKTDVFSYGA 547
P + PPE M+ + S+K+D++++G
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGV 194
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KLG+G FG V+ G +A+KTL+ M P F E Q + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-------------GTMSP-EAFLQEAQVMKKL 67
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+H L++L + + IV EYM GSL D L + L + ++ +A + Y
Sbjct: 68 RHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE----TSNMKTMYTENLTGTRPY 291
+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E T+ + T
Sbjct: 127 VERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTA---- 180
Query: 292 MPPEAMHCQISTKTDVFSYGVILLELLT 319
P A++ + + K+DV+S+G++L EL T
Sbjct: 181 -PEAALYGRFTIKSDVWSFGILLTELTT 207
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + Y+ ++ +HRD+++AN+L+ EN V K+ DFG+ ++ E + +T
Sbjct: 120 IASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE----WTARQGAK 173
Query: 524 RP--YMPPE-AMHCQISTKTDVFSYG 546
P + PE A++ + + K+DV+S+G
Sbjct: 174 FPIKWTAPEAALYGRFTIKSDVWSFG 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 32/208 (15%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V G + G ++AVK ++ F E ++Q +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---------------FLAEASVMTQLR 72
Query: 177 HVNLLRLLGLCNNIMNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H NL++LLG+ IV EYM GSL D L R L + +L V EA+
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YM 292
YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ + TG P +
Sbjct: 132 YLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD------TGKLPVKWT 181
Query: 293 PPEAMH-CQISTKTDVFSYGVILLELLT 319
PEA+ + STK+DV+S+G++L E+ +
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+L V EA+ YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ +
Sbjct: 122 FSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD----- 172
Query: 520 LTGTRP--YMPPEAMH-CQISTKTDVFSYG 546
TG P + PEA+ + STK+DV+S+G
Sbjct: 173 -TGKLPVKWTAPEALREKKFSTKSDVWSFG 201
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 32/206 (15%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V G + G ++AVK ++ F E ++Q +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---------------FLAEASVMTQLR 63
Query: 177 HVNLLRLLGLCNNIMNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H NL++LLG+ IV EYM GSL D L R L + +L V EA+
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YM 292
YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ + TG P +
Sbjct: 123 YLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD------TGKLPVKWT 172
Query: 293 PPEAMH-CQISTKTDVFSYGVILLEL 317
PEA+ STK+DV+S+G++L E+
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEI 198
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+L V EA+ YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ +
Sbjct: 113 FSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD----- 163
Query: 520 LTGTRP--YMPPEAMH-CQISTKTDVFSYG 546
TG P + PEA+ STK+DV+S+G
Sbjct: 164 -TGKLPVKWTAPEALREAAFSTKSDVWSFG 192
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 268
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 327
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHR++ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 328 MEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 381
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 416
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHR++ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 320 MATQISSAMEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAH 373
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 374 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 403
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 83
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 141
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 142 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKL 197
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 242
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 135 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-- 190
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 85
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 143
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 144 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKL 199
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 137 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-- 192
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 310
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N +++ +A ++ A
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSA 369
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHR++ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 370 MEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 423
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHR++ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 362 MATQISSAMEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAH 415
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 416 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 445
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 39/230 (16%)
Query: 116 KLGEGQFGTVYYGKLKN------GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LGEG FG V+ + N M +AVK L+ EA+ F+ E
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-------------EASESARQDFQREA 65
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNT-------------P 215
+ L+ +H +++R G+C + V+EYM +G L +R R +
Sbjct: 66 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPG 124
Query: 216 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 275
PL + ++A VA + YL L +HRD+ + N L+ + V K+GDFG+ + ++
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 276 NMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
+ + + R +MPPE+ ++ + +T++DV+S+GV+L E+ T G +P
Sbjct: 183 DYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL + ++A VA + YL L +HRD+ + N L+ + V K+GDFG+ + ++
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ + + R +MPPE+ ++ + +T++DV+S+G
Sbjct: 183 DYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFG 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 27/215 (12%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLG GQ+G VY G K + +AVKTL+ + + F E +
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMK 271
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ KH NL++LLG+C I+ E+M G+L D L R N + + +A ++ A
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSA 330
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP-- 290
+ YL K IHR++ + N L+ EN + K+ DFG+ ++ YT + P
Sbjct: 331 MEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIK 384
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PE++ + + S K+DV+++GV+L E+ T GM P
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+A ++ A+ YL K IHR++ + N L+ EN + K+ DFG+ ++ YT +
Sbjct: 323 MATQISSAMEYLEK--KNFIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAH 376
Query: 520 LTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PE++ + + S K+DV+++G
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFG 406
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 85
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 143
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 144 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKL 199
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 137 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-- 192
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 90
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 91 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 148
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 149 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKL 204
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 249
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 142 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-- 197
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 198 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 86
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 144
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 145 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKL 200
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 245
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 138 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-- 193
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V G + G ++AVK ++ F E ++Q +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---------------FLAEASVMTQLR 244
Query: 177 HVNLLRLLGLCNNIMNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H NL++LLG+ IV EYM GSL D L R L + +L V EA+
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YM 292
YL +HRD+ + NVL+ E+ V K+ DFG+ K + ++ TG P +
Sbjct: 304 YLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--------TGKLPVKWT 353
Query: 293 PPEAMH-CQISTKTDVFSYGVILLELLT 319
PEA+ + STK+DV+S+G++L E+ +
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYS 381
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+L V EA+ YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ +
Sbjct: 294 FSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD----- 344
Query: 520 LTGTRP--YMPPEAMH-CQISTKTDVFSYG 546
TG P + PEA+ + STK+DV+S+G
Sbjct: 345 -TGKLPVKWTAPEALREKKFSTKSDVWSFG 373
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 32/206 (15%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V G + G ++AVK ++ F E ++Q +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---------------FLAEASVMTQLR 57
Query: 177 HVNLLRLLGLCNNIMNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H NL++LLG+ IV EYM GSL D L R L + +L V EA+
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YM 292
YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ + TG P +
Sbjct: 117 YLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD------TGKLPVKWT 166
Query: 293 PPEAMH-CQISTKTDVFSYGVILLEL 317
PEA+ + STK+DV+S+G++L E+
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEI 192
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+L V EA+ YL +HRD+ + NVL+ E+ V K+ DFG+ K E S+ +
Sbjct: 107 FSLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD----- 157
Query: 520 LTGTRP--YMPPEAMH-CQISTKTDVFSYG 546
TG P + PEA+ + STK+DV+S+G
Sbjct: 158 -TGKLPVKWTAPEALREKKFSTKSDVWSFG 186
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 39/230 (16%)
Query: 116 KLGEGQFGTVYYGKLKN------GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LGEG FG V+ + N M +AVK L+ EA+ F+ E
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-------------EASESARQDFQREA 94
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNT-------------P 215
+ L+ +H +++R G+C + V+EYM +G L +R R +
Sbjct: 95 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPG 153
Query: 216 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 275
PL + ++A VA + YL L +HRD+ + N L+ + V K+GDFG+ + ++
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 276 NMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
+ + + R +MPPE+ ++ + +T++DV+S+GV+L E+ T G +P
Sbjct: 212 DYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL + ++A VA + YL L +HRD+ + N L+ + V K+GDFG+ + ++
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ + + R +MPPE+ ++ + +T++DV+S+G
Sbjct: 212 DYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFG 247
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 39/230 (16%)
Query: 116 KLGEGQFGTVYYGKLKN------GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LGEG FG V+ + N M +AVK L+ EA+ F+ E
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-------------EASESARQDFQREA 71
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNN------------TP- 215
+ L+ +H +++R G+C + V+EYM +G L +R R + P
Sbjct: 72 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPG 130
Query: 216 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 275
PL + ++A VA + YL L +HRD+ + N L+ + V K+GDFG+ + ++
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 276 NMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
+ + + R +MPPE+ ++ + +T++DV+S+GV+L E+ T G +P
Sbjct: 189 DYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL + ++A VA + YL L +HRD+ + N L+ + V K+GDFG+ + ++
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ + + R +MPPE+ ++ + +T++DV+S+G
Sbjct: 189 DYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFG 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 60
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 118
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
YL SK +HRD+ + N L+++ V K+ DFG+ + + YT + P +
Sbjct: 119 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSRGSKFPVRW 172
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLT 319
PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + + YT +
Sbjct: 114 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSRGSK 167
Query: 524 RP--YMPPEA-MHCQISTKTDVFSYGA 547
P + PPE M+ + S+K+D++++G
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGV 194
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 86
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 144
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 145 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH--NKTGAKL 200
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 245
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 138 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH-- 193
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 30/211 (14%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V YGK + ++A+K ++ E +M E E + +
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-------------EGSMSEDEFIE-EAKVMMN 75
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C I+ EYM NG L + L + + + + + V EA+
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAM 133
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM----SETSNMKTMYTENLTGTR 289
YL SK +HRD+ + N L+++ V K+ DFG+ + ETS++ + +
Sbjct: 134 EYLE--SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR----- 186
Query: 290 PYMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ PPE M+ + S+K+D++++GV++ E+ +
Sbjct: 187 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM----SETSNVKTMYTEN 519
V EA+ YL S K +HRD+ + N L+++ V K+ DFG+ + ETS+V + +
Sbjct: 129 VCEAMEYLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 520 LTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ PPE M+ + S+K+D++++G
Sbjct: 187 ------WSPPEVLMYSKFSSKSDIWAFG 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 117 LGEGQFGTVYYGKL--KNGMEI--AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G FG VY+G L +G +I AVK+L TE + +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII------------M 144
Query: 173 SQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L LLG+C + +V YM +G L + + + P + L VA
Sbjct: 145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVA 202
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR- 289
+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++ N TG +
Sbjct: 203 KGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH--NKTGAKL 258
Query: 290 --PYMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKPIDDNNTI 330
+M E++ Q +TK+DV+S+GV+L EL+T G P D NT
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 303
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
L VA+ + +L SK +HRD+ + N +LDE F K+ DFG+ + +++
Sbjct: 196 GFGLQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-- 251
Query: 519 NLTGTR---PYMPPEAMHCQ-ISTKTDVFSYGA 547
N TG + +M E++ Q +TK+DV+S+G
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 284
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 58/266 (21%)
Query: 110 YPRRG----NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAM 159
YPR +GEG FG V+ + + +AVK L+ EA+
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK------------EEASA 91
Query: 160 IPILLFENEVQTLSQCKHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRL---------- 208
F+ E +++ + N+++LLG+C C+++EYM G L + L
Sbjct: 92 DMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 151
Query: 209 ---------ARVNNT--PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 257
ARV++ PPL ++ IA VA + YL + +HRD+ + N L+ E
Sbjct: 152 LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE--RKFVHRDLATRNCLVGE 209
Query: 258 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLE 316
N V K+ DFG+ + +++ + R +MPPE++ + + +T++DV++YGV+L E
Sbjct: 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 317 LLT-GMKPIDDNNTILYYYLVVEQEV 341
+ + G++P YY + +EV
Sbjct: 269 IFSYGLQP---------YYGMAHEEV 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 444 ARVNNT--PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 501
ARV++ PPL ++ IA VA + YL + +HRD+ + N L+ EN V K+ DF
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE--RKFVHRDLATRNCLVGENMVVKIADF 218
Query: 502 GIVKMSETSNVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYG 546
G+ + +++ + R +MPPE++ + + +T++DV++YG
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYG 263
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+++G+G FG VY G + E+ A+K ++ + E+ LS
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI------------QQEITVLS 72
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
QC + R G + I+ EY+ GS D L PL+ +I + +
Sbjct: 73 QCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKG 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS K IHRD+K+ANVLL E KL DFG+ + +K GT +M
Sbjct: 129 LDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RNXFVGTPFWM 183
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
PE + K D++S G+ +EL G P D + + +L+ + P E
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLE 237
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL+ +I + + L YLHS K IHRD+K+ANVLL E KL DFG+ +
Sbjct: 112 PLEETYIATILREILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 169
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRE 563
+K GT +M PE + K + + A I + IT +++A E
Sbjct: 170 QIK---RNXFVGTPFWMAPEVI------KQSAYDFKADIWSLGITAIELAKGE 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 35/297 (11%)
Query: 113 RGNKLGEGQFGTVYYGKLKNG-----MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
R +G G+FG VY G LK + +A+KTL+ TE + L
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---------TEKQRVDFL---G 95
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
E + Q H N++RL G+ + I+ EYM NG+L D+ R + + +
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGE-FSVLQLVGML 153
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
G+A + YL +++ +HRD+ + N+L++ N V K+ DFG+ ++ E T T
Sbjct: 154 RGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 287 GTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 344
+ PEA+ + + ++ +DV+S+G+++ E++T G +P Y+ + E V
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP---------YWELSNHE--VM 260
Query: 345 EVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLLSKSMFVCNSLANL 401
+ ++ + I + +C E+ +R DIV +L K + +SL L
Sbjct: 261 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTL 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL +++ +HRD+ + N+L++ N V K+ DFG+ ++ E T T
Sbjct: 155 GIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 523 TRPYMPPEAM-HCQISTKTDVFSYG 546
+ PEA+ + + ++ +DV+S+G
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFG 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG GQFG V+ G N ++AVKTL+ + + F E +
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLK--------------PGTMSVQAFLEEANLMKT 63
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+H L+RL + I+ E+M GSL D L + + + K + +AE +
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
Y+ K IHRD+++ANVL+ E+ + K+ DFG+ ++ E + YT P +
Sbjct: 123 AYIER--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE----YTAREGAKFPIKW 176
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT 319
PEA++ T K++V+S+G++L E++T
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVT 205
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+AE + Y+ K IHRD+++ANVL+ E+ + K+ DFG+ ++ E + YT
Sbjct: 118 IAEGMAYIER--KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE----YTAREGAK 171
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P + PEA++ T K++V+S+G
Sbjct: 172 FPIKWTAPEAINFGCFTIKSNVWSFG 197
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G GQFG V+ G N ++A+KT+ E AM E E + + +
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-------------EGAMSEEDFIE-EAEVMMK 58
Query: 175 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C C+V+E+M +G L D L + + L V E +
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR---P 290
YL S +IHRD+ + N L+ EN V K+ DFG+ + + YT + TGT+
Sbjct: 117 AYLEEAS--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSS-TGTKFPVK 169
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNN 328
+ PE + S+K+DV+S+GV++ E+ + G P ++ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 209
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
+ L V E + YL S +IHRD+ + N L+ EN V K+ DFG+ + + YT
Sbjct: 107 GMCLDVCEGMAYLEEAS--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTS 160
Query: 519 NLTGTR---PYMPPEAM-HCQISTKTDVFSYG 546
+ TGT+ + PE + S+K+DV+S+G
Sbjct: 161 S-TGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG GQFG V GK K ++AVK ++ E +M F+ E QT+ +
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIK-------------EGSMSEDEFFQ-EAQTMMK 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++ G+C+ IV EY+ NG L + L ++ L+ ++ + V E +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGM 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
+L S IHRD+ + N L+D + K+ DFG+ + + Y ++ P +
Sbjct: 118 AFLE--SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV----LDDQYVSSVGTKFPVKW 171
Query: 292 MPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPID 325
PE H + S+K+DV+++G+++ E+ + G P D
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L+ ++ + V E + +L S IHRD+ + N L+D + K+ DFG+ +
Sbjct: 101 LEPSQLLEMCYDVCEGMAFLES--HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV---- 154
Query: 512 VKTMYTENLTGTRP--YMPPEAMH-CQISTKTDVFSYG 546
+ Y ++ P + PE H + S+K+DV+++G
Sbjct: 155 LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 38/231 (16%)
Query: 115 NKLGEGQFGTVYYGKL------KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LGEG FG V+ + K+ M +AVK L+ F+ E
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD-------------FQRE 67
Query: 169 VQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLY--------DRLARVNNTP---- 215
+ L+ +H ++++ G+C + I V+EYM +G L D + V+ P
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 216 -PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 274
L ++ IA +A + YL S+ +HRD+ + N L+ N + K+GDFG+ + +
Sbjct: 128 GELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 185
Query: 275 SNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
++ + + R +MPPE+ M+ + +T++DV+S+GVIL E+ T G +P
Sbjct: 186 TDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 412 ENNNINWELHYTGIPVIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYL 471
++ ++N L G +IL G+ +Q + L ++ IA +A + YL
Sbjct: 100 KHGDLNKFLRAHGPDAMILVDGQPRQAK----------GELGLSQMLHIASQIASGMVYL 149
Query: 472 HSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA 531
S+ +HRD+ + N L+ N + K+GDFG+ + +++ + + R +MPPE+
Sbjct: 150 --ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPES 206
Query: 532 -MHCQISTKTDVFSYG 546
M+ + +T++DV+S+G
Sbjct: 207 IMYRKFTTESDVWSFG 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 33/248 (13%)
Query: 115 NKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
++G G FG VY+ + ++N +A+K + EV+ L
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD----------IIKEVRFLQ 70
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ +H N ++ G +V EY C GS D L + PL + ++ G +
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLE--VHKKPLQEVEIAAVTHGALQG 127
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS + +IHRDVK+ N+LL E + KLGDFG + +N GT +M
Sbjct: 128 LAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-------FVGTPYWM 178
Query: 293 PPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 348
PE + Q K DV+S G+ +EL P+ + N + Y + + E P
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---- 234
Query: 349 KEAGEWNE 356
++G W+E
Sbjct: 235 -QSGHWSE 241
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL + ++ G + L YLHS + +IHRDVK+ N+LL E + KLGDFG + +
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168
Query: 511 NVKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGAQIKTQHITNVDIADRE 563
N GT +M PE + Q K DV+S G IT +++A+R+
Sbjct: 169 N-------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-------ITCIELAERK 211
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 33/248 (13%)
Query: 115 NKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
++G G FG VY+ + ++N +A+K + EV+ L
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD----------IIKEVRFLQ 109
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+ +H N ++ G +V EY C GS D L + PL + ++ G +
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLE--VHKKPLQEVEIAAVTHGALQG 166
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS + +IHRDVK+ N+LL E + KLGDFG + +N GT +M
Sbjct: 167 LAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-------XFVGTPYWM 217
Query: 293 PPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 348
PE + Q K DV+S G+ +EL P+ + N + Y + + E P
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---- 273
Query: 349 KEAGEWNE 356
++G W+E
Sbjct: 274 -QSGHWSE 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL + ++ G + L YLHS + +IHRDVK+ N+LL E + KLGDFG + +
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207
Query: 511 NVKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGAQIKTQHITNVDIADRE 563
N GT +M PE + Q K DV+S G IT +++A+R+
Sbjct: 208 N-------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-------ITCIELAERK 250
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
K+G+G FG V+ G + N + +A+K ++ + E+ LS
Sbjct: 14 KIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI------------QQEITVLS 60
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
QC + + G + I+ EY+ GS D L PLD + +I + +
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKG 116
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS K IHRD+K+ANVLL E+ KL DFG+ + +K GT +M
Sbjct: 117 LDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNTFVGTPFWM 171
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
PE + +K D++S G+ +EL G P + + + +L+ + P E
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE 225
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PLD + +I + + L YLHS K IHRD+K+ANVLL E+ KL DFG+ +
Sbjct: 100 PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 511 NVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQIKTQHITNVDIADRERYYS 567
+K GT +M PE + +K D++S G IT +++A E +S
Sbjct: 158 QIK---RNTFVGTPFWMAPEVIKQSAYDSKADIWSLG-------ITAIELARGEPPHS 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G G FG VY G E+AVK E + + K
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIEN---------VRQEAKLFAMLK 64
Query: 177 HVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
H N++ L G+C N C+V E+ G L +R+ PP + + A+ +A ++Y
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPP---DILVNWAVQIARGMNY 120
Query: 236 LHSLS-KPIIHRDVKSANVLLDE--------NFVPKLGDFGIVK-MSETSNMKTMYTENL 285
LH + PIIHRD+KS+N+L+ + N + K+ DFG+ + T+ M
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA------ 174
Query: 286 TGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLV 336
G +M PE + + +K +DV+SYGV+L ELLTG P + + Y V
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 21/129 (16%)
Query: 434 ETKQCQLFKLARVNNTPPLDSNKR------YSIALGVAEALHYLHSLS-KPIIHRDVKSA 486
E C + + AR + S KR + A+ +A ++YLH + PIIHRD+KS+
Sbjct: 78 EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 487 NVLLDE--------NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQIST 538
N+L+ + N + K+ DFG+ + E M + G +M PE + + +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAR--EWHRTTKM---SAAGAYAWMAPEVIRASMFS 192
Query: 539 K-TDVFSYG 546
K +DV+SYG
Sbjct: 193 KGSDVWSYG 201
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
K+G+G FG V+ G + N + +A+K ++ + E+ LS
Sbjct: 29 KIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI------------QQEITVLS 75
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
QC + + G + I+ EY+ GS D L PLD + +I + +
Sbjct: 76 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKG 131
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS K IHRD+K+ANVLL E+ KL DFG+ + +K GT +M
Sbjct: 132 LDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNXFVGTPFWM 186
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
PE + +K D++S G+ +EL G P + + + +L+ + P E
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE 240
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PLD + +I + + L YLHS K IHRD+K+ANVLL E+ KL DFG+ +
Sbjct: 115 PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
Query: 511 NVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQIKTQHITNVDIADRERYYS 567
+K GT +M PE + +K D++S G IT +++A E +S
Sbjct: 173 QIK---RNXFVGTPFWMAPEVIKQSAYDSKADIWSLG-------ITAIELARGEPPHS 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
K+G+G FG V+ G + N + +A+K ++ + E+ LS
Sbjct: 14 KIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI------------QQEITVLS 60
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
QC + + G + I+ EY+ GS D L PLD + +I + +
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKG 116
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS K IHRD+K+ANVLL E+ KL DFG+ + +K GT +M
Sbjct: 117 LDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNXFVGTPFWM 171
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
PE + +K D++S G+ +EL G P + + + +L+ + P E
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE 225
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PLD + +I + + L YLHS K IHRD+K+ANVLL E+ KL DFG+ +
Sbjct: 100 PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 511 NVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQIKTQHITNVDIADRERYYS 567
+K GT +M PE + +K D++S G IT +++A E +S
Sbjct: 158 QIK---RNXFVGTPFWMAPEVIKQSAYDSKADIWSLG-------ITAIELARGEPPHS 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G GQFG V+ G N ++A+KT+ E AM E E + + +
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-------------EGAMSEEDFIE-EAEVMMK 61
Query: 175 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C C+V+E+M +G L D L + + L V E +
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM 119
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR---P 290
YL +IHRD+ + N L+ EN V K+ DFG+ + + YT + TGT+
Sbjct: 120 AYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSS-TGTKFPVK 172
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNN 328
+ PE + S+K+DV+S+GV++ E+ + G P ++ +
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
+ L V E + YL +IHRD+ + N L+ EN V K+ DFG+ + + YT
Sbjct: 110 GMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTS 163
Query: 519 NLTGTR---PYMPPEAM-HCQISTKTDVFSYG 546
+ TGT+ + PE + S+K+DV+S+G
Sbjct: 164 S-TGTKFPVKWASPEVFSFSRYSSKSDVWSFG 194
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 25/219 (11%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G LK + +A+KTL+ +EA++ +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI------------M 88
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L G+ I+ E+M NGSL D R N+ + + G+A
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQ-FTVIQLVGMLRGIAA 146
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL ++ +HRD+ + N+L++ N V K+ DFG+ + E YT L G P
Sbjct: 147 GMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 204
Query: 291 -YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + + ++ +DV+SYG+++ E+++ G +P D
Sbjct: 205 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL ++ +HRD+ + N+L++ N V K+ DFG+ + E YT L G
Sbjct: 143 GIAAGMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 201 KIPIRWTAPEAIQYRKFTSASDVWSYG 227
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G GQFG V+ G N ++A+KT+ E AM E E + + +
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-------------EGAMSEEDFIE-EAEVMMK 56
Query: 175 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C C+V+E+M +G L D L + + L V E +
Sbjct: 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM 114
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR---P 290
YL +IHRD+ + N L+ EN V K+ DFG+ + + YT + TGT+
Sbjct: 115 AYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSS-TGTKFPVK 167
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNN 328
+ PE + S+K+DV+S+GV++ E+ + G P ++ +
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 207
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
+ L V E + YL +IHRD+ + N L+ EN V K+ DFG+ + + YT
Sbjct: 105 GMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTS 158
Query: 519 NLTGTR---PYMPPEAM-HCQISTKTDVFSYG 546
+ TGT+ + PE + S+K+DV+S+G
Sbjct: 159 S-TGTKFPVKWASPEVFSFSRYSSKSDVWSFG 189
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 29/220 (13%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G GQFG V+ G N ++A+KT+ E AM E E + + +
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-------------EGAMSEEDFIE-EAEVMMK 58
Query: 175 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C C+V+E+M +G L D L + + L V E +
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR---P 290
YL +IHRD+ + N L+ EN V K+ DFG+ + + YT + TGT+
Sbjct: 117 AYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSS-TGTKFPVK 169
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNN 328
+ PE + S+K+DV+S+GV++ E+ + G P ++ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 209
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
+ L V E + YL +IHRD+ + N L+ EN V K+ DFG+ + + YT
Sbjct: 107 GMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTS 160
Query: 519 NLTGTR---PYMPPEAM-HCQISTKTDVFSYG 546
+ TGT+ + PE + S+K+DV+S+G
Sbjct: 161 S-TGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 35/228 (15%)
Query: 115 NKLGEGQFGTVYYGKLKN------GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LGEG FG V+ + N + +AVKTL+ F E
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD-------------FHRE 65
Query: 169 VQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLY--------DRLARVNNTPP--L 217
+ L+ +H ++++ G+C I V+EYM +G L D + PP L
Sbjct: 66 AELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
++ IA +A + YL S+ +HRD+ + N L+ EN + K+GDFG+ + +++
Sbjct: 126 TQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
Query: 278 KTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
+ + R +MPPE+ M+ + +T++DV+S GV+L E+ T G +P
Sbjct: 184 YRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 443 LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 502
+A N L ++ IA +A + YL S+ +HRD+ + N L+ EN + K+GDFG
Sbjct: 116 MAEGNPPTELTQSQMLHIAQQIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFG 173
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGA 547
+ + +++ + + R +MPPE+ M+ + +T++DV+S G
Sbjct: 174 MSRDVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGV 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
K+G+G FG V+ G + N + +A+K ++ + E+ LS
Sbjct: 34 KIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDI------------QQEITVLS 80
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
QC + + G + I+ EY+ GS D L PLD + +I + +
Sbjct: 81 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKG 136
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS K IHRD+K+ANVLL E+ KL DFG+ + +K GT +M
Sbjct: 137 LDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNTFVGTPFWM 191
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
PE + +K D++S G+ +EL G P + + + +L+ + P E
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE 245
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PLD + +I + + L YLHS K IHRD+K+ANVLL E+ KL DFG+ +
Sbjct: 120 PLDETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 511 NVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQIKTQHITNVDIADRERYYS 567
+K GT +M PE + +K D++S G IT +++A E +S
Sbjct: 178 QIK---RNTFVGTPFWMAPEVIKQSAYDSKADIWSLG-------ITAIELARGEPPHS 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG GQFG V+ ++AVKT++ + + F E +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMK--------------PGSMSVEAFLAEANVMKT 239
Query: 175 CKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRL-ARVNNTPPLDSNKRYSIALGVAEAL 233
+H L++L + I+ E+M GSL D L + + PL K + +AE +
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGM 297
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
++ + IHRD+++AN+L+ + V K+ DFG+ ++ E + YT P +
Sbjct: 298 AFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----YTAREGAKFPIKW 351
Query: 292 MPPEAMH-CQISTKTDVFSYGVILLELLT 319
PEA++ + K+DV+S+G++L+E++T
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVT 380
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+AE + ++ + IHRD+++AN+L+ + V K+ DFG+ ++ E + YT
Sbjct: 293 IAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----YTAREGAK 346
Query: 524 RP--YMPPEAMH-CQISTKTDVFSYG 546
P + PEA++ + K+DV+S+G
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFG 372
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K N +A+K L E++
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ----------LRREIEIQ 69
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LR+ ++ ++ E+ G LY L + D + + +A+
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELAD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
ALHY H + +IHRD+K N+L+ K+ DFG + + ++ + GT Y
Sbjct: 127 ALHYCHE--RKVIHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRXMCGTLDY 179
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
+PPE + + K D++ GV+ E L GM P D
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A+ALHY H + +IHRD+K N+L+ K+ DFG + +
Sbjct: 112 FDEQRSATFMEELADALHYCHE--RKVIHRDIKPENLLMGYKGELKIADFGW-----SVH 164
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGA 547
++ + GT Y+PPE + + K D++ G
Sbjct: 165 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 201
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG GQFG V+ ++AVKT++ + + F E +
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMK--------------PGSMSVEAFLAEANVMKT 66
Query: 175 CKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRL-ARVNNTPPLDSNKRYSIALGVAEAL 233
+H L++L + I+ E+M GSL D L + + PL K + +AE +
Sbjct: 67 LQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGM 124
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--Y 291
++ + IHRD+++AN+L+ + V K+ DFG+ ++ E + YT P +
Sbjct: 125 AFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----YTAREGAKFPIKW 178
Query: 292 MPPEAMHC-QISTKTDVFSYGVILLELLT 319
PEA++ + K+DV+S+G++L+E++T
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVT 207
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+AE + ++ + IHRD+++AN+L+ + V K+ DFG+ ++ E + YT
Sbjct: 120 IAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE----YTAREGAK 173
Query: 524 RP--YMPPEAMHC-QISTKTDVFSYG 546
P + PEA++ + K+DV+S+G
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFG 199
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K N +A+K L E++
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ----------LRREIEIQ 68
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S +H N+LR+ ++ ++ E+ G LY L + D + + +A+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELAD 125
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
ALHY H + +IHRD+K N+L+ K+ DFG + + ++ + GT Y
Sbjct: 126 ALHYCHE--RKVIHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRXMCGTLDY 178
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
+PPE + + K D++ GV+ E L GM P D
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A+ALHY H + +IHRD+K N+L+ K+ DFG + +
Sbjct: 111 FDEQRSATFMEELADALHYCHE--RKVIHRDIKPENLLMGYKGELKIADFGW-----SVH 163
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGA 547
++ + GT Y+PPE + + K D++ G
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G GQFG V+ G N ++A+KT++ E +M E E + + +
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIK-------------EGSMSEDDFIE-EAEVMMK 78
Query: 175 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C C+V+E+M +G L D L + + L V E +
Sbjct: 79 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM 136
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR---P 290
YL +IHRD+ + N L+ EN V K+ DFG+ + + YT + TGT+
Sbjct: 137 AYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSS-TGTKFPVK 189
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT 319
+ PE + S+K+DV+S+GV++ E+ +
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
+ L V E + YL +IHRD+ + N L+ EN V K+ DFG+ + + YT
Sbjct: 127 GMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTS 180
Query: 519 NLTGTR---PYMPPEAM-HCQISTKTDVFSYG 546
+ TGT+ + PE + S+K+DV+S+G
Sbjct: 181 S-TGTKFPVKWASPEVFSFSRYSSKSDVWSFG 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G GQFG V+ G N ++A+KT+ E AM E E + + +
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-------------EGAMSEEDFIE-EAEVMMK 59
Query: 175 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H L++L G+C C+V E+M +G L D L + + L V E +
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR---P 290
YL +IHRD+ + N L+ EN V K+ DFG+ + + YT + TGT+
Sbjct: 118 AYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSS-TGTKFPVK 170
Query: 291 YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNN 328
+ PE + S+K+DV+S+GV++ E+ + G P ++ +
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
+ L V E + YL +IHRD+ + N L+ EN V K+ DFG+ + + YT
Sbjct: 108 GMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTS 161
Query: 519 NLTGTR---PYMPPEAM-HCQISTKTDVFSYG 546
+ TGT+ + PE + S+K+DV+S+G
Sbjct: 162 S-TGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 45/226 (19%)
Query: 117 LGEGQFGTVYYGKLKNG---MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+GEG FG V ++K M+ A+K ++ F E++ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD------------FAGELEVL- 69
Query: 174 QCK---HVNLLRLLGLCNNIMNC-IVYEYMCNGSLYD--RLARVNNTPP----------- 216
CK H N++ LLG C + + EY +G+L D R +RV T P
Sbjct: 70 -CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
L S + A VA + YL K IHRD+ + N+L+ EN+V K+ DFG+ + E
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 277 MKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
KTM G P +M E+++ + +T +DV+SYGV+L E+++
Sbjct: 187 KKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S + A VA + YL K IHRD+ + N+L+ EN+V K+ DFG+ + E
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
KTM G P +M E+++ + +T +DV+SYG
Sbjct: 187 KKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYG 218
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 45/226 (19%)
Query: 117 LGEGQFGTVYYGKLKNG---MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+GEG FG V ++K M+ A+K ++ F E++ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD------------FAGELEVL- 79
Query: 174 QCK---HVNLLRLLGLCNNIMNC-IVYEYMCNGSLYD--RLARVNNTPP----------- 216
CK H N++ LLG C + + EY +G+L D R +RV T P
Sbjct: 80 -CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
L S + A VA + YL K IHRD+ + N+L+ EN+V K+ DFG+ + E
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 277 MKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
KTM G P +M E+++ + +T +DV+SYGV+L E+++
Sbjct: 197 KKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S + A VA + YL K IHRD+ + N+L+ EN+V K+ DFG+ + E
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
KTM G P +M E+++ + +T +DV+SYG
Sbjct: 197 KKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYG 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 60/295 (20%)
Query: 56 QHNQKIKFKLPDKKWLQEVIQQEEANNKTEYIGELIAFTFCDLERATDGFNRK-PYPRR- 113
++ QK K+++ +W ++I+ E N ++TF D + +N K +PR
Sbjct: 5 KYKQKPKYQV---RW--KIIESYEGN----------SYTFIDPTQLP--YNEKWEFPRNN 47
Query: 114 ---GNKLGEGQFGTVY------YGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
G LG G FG V GK +++AVK L+ EA M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE-----KEALM----- 97
Query: 165 FENEVQTLSQC-KHVNLLRLLGLCNNIMNCIVY-EYMCNGSLYDRLARVNNTPPLDSNKR 222
+E++ +S +H N++ LLG C + +V EY C G L + L R + L+++
Sbjct: 98 --SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV--LETDPA 153
Query: 223 YSIA---LGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGIVK- 270
++IA L + LH+ + SK IHRDV + NVLL V K+GDFG+ +
Sbjct: 154 FAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 271 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKP 323
+ SN + N +M PE++ C + ++DV+SYG++L E+ + G+ P
Sbjct: 214 IMNDSNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
VA+ + +L SK IHRDV + NVLL V K+GDFG+ + M++++ + N
Sbjct: 173 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNAR 227
Query: 522 GTRPYMPPEAMH-CQISTKTDVFSYG 546
+M PE++ C + ++DV+SYG
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYG 253
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 60/295 (20%)
Query: 56 QHNQKIKFKLPDKKWLQEVIQQEEANNKTEYIGELIAFTFCDLERATDGFNRK-PYPRR- 113
++ QK K+++ +W ++I+ E N ++TF D + +N K +PR
Sbjct: 5 KYKQKPKYQV---RW--KIIESYEGN----------SYTFIDPTQLP--YNEKWEFPRNN 47
Query: 114 ---GNKLGEGQFGTVY------YGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
G LG G FG V GK +++AVK L+ EA M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE-----KEALM----- 97
Query: 165 FENEVQTLSQC-KHVNLLRLLGLCNNIMNCIVY-EYMCNGSLYDRLARVNNTPPLDSNKR 222
+E++ +S +H N++ LLG C + +V EY C G L + L R + L+++
Sbjct: 98 --SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV--LETDPA 153
Query: 223 YSIALGVAEALHYLHS-----------LSKPIIHRDVKSANVLLDENFVPKLGDFGIVK- 270
++IA A LH SK IHRDV + NVLL V K+GDFG+ +
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 271 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKP 323
+ SN + N +M PE++ C + ++DV+SYG++L E+ + G+ P
Sbjct: 214 IMNDSNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
VA+ + +L SK IHRDV + NVLL V K+GDFG+ + M++++ + N
Sbjct: 173 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNAR 227
Query: 522 GTRPYMPPEAMH-CQISTKTDVFSYG 546
+M PE++ C + ++DV+SYG
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYG 253
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ EA++ +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI------------M 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G G V YG+L+ + +A+K L+ +EA++ +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI------------M 104
Query: 173 SQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ + IV EYM NGSL D R ++ + + GV
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQ-FTIMQLVGMLRGVGA 162
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL L +HRD+ + NVL+D N V K+ DFG+ ++ E + YT G P
Sbjct: 163 GMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAYTTT-GGKIPI 218
Query: 291 -YMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
+ PEA+ + S+ +DV+S+GV++ E+L G +P
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
GV + YL L +HRD+ + NVL+D N V K+ DFG+ ++ E + YT G
Sbjct: 159 GVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAYTTT-GG 214
Query: 523 TRP--YMPPEAMHCQ-ISTKTDVFSYG 546
P + PEA+ + S+ +DV+S+G
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFG 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 116 KLGEGQFGTVYYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
++G+G FG V+ G + N + +A+K ++ + E+ LS
Sbjct: 30 RIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDI------------QQEITVLS 76
Query: 174 QCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
QC + + G I+ EY+ GS D L P D + ++ + +
Sbjct: 77 QCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL----RAGPFDEFQIATMLKEILKG 132
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLHS K IHRD+K+ANVLL E KL DFG+ + +K GT +M
Sbjct: 133 LDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RNTFVGTPFWM 187
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 342
PE + +K D++S G+ +EL G P D + + +L+ + P
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPP 238
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
P D + ++ + + L YLHS K IHRD+K+ANVLL E KL DFG+ +
Sbjct: 116 PFDEFQIATMLKEILKGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 173
Query: 511 NVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQIKTQHITNVDIADRE 563
+K GT +M PE + +K D++S G IT +++A E
Sbjct: 174 QIK---RNTFVGTPFWMAPEVIQQSAYDSKADIWSLG-------ITAIELAKGE 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G G V YG+L+ + +A+K L+ +EA++ +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI------------M 104
Query: 173 SQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ + IV EYM NGSL D R ++ + + GV
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQ-FTIMQLVGMLRGVGA 162
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL L +HRD+ + NVL+D N V K+ DFG+ ++ E T +
Sbjct: 163 GMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + S+ +DV+S+GV++ E+L G +P
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
GV + YL L +HRD+ + NVL+D N V K+ DFG+ ++ E T
Sbjct: 159 GVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
+ PEA+ + S+ +DV+S+G
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFG 241
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG G FG V+ + + NG A+K L+ T +E LS
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN----------DERLMLSIV 63
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H ++R+ G + ++ +Y+ G L+ L R + P K Y A V AL
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFY--AAEVCLALE 120
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLHS K II+RD+K N+LLD+N K+ DFG K T L GT Y+ P
Sbjct: 121 YLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV------TYXLCGTPDYIAP 172
Query: 295 EAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
E + + K+ D +S+G+++ E+L G P D+NT+ Y ++ E+
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 220
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 439 QLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 498
+LF L R + P K Y A V AL YLHS K II+RD+K N+LLD+N K+
Sbjct: 92 ELFSLLRKSQRFPNPVAKFY--AAEVCLALEYLHS--KDIIYRDLKPENILLDKNGHIKI 147
Query: 499 GDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
DFG K T L GT Y+ PE + + K+ D +S+G I
Sbjct: 148 TDFGFAKYVPDV------TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 193
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G LK + +A+KTL+ +EA++ +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI------------M 62
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L G+ I+ E+M NGSL D R N+ + + G+A
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQ-FTVIQLVGMLRGIAA 120
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL ++ +HR + + N+L++ N V K+ DFG+ + E YT L G P
Sbjct: 121 GMKYLADMN--YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 291 -YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + + ++ +DV+SYG+++ E+++ G +P D
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 217
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL ++ +HR + + N+L++ N V K+ DFG+ + E YT L G
Sbjct: 117 GIAAGMKYLADMN--YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYG 201
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 31/218 (14%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 71
Query: 173 SQCKHVNLLRLLGLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
Q H N++RL G+ +M IV EYM NGSL D R ++ + + G+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVM--IVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGI 127
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 128 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GGKI 183
Query: 290 P--YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
P + PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 126 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 181
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYG 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 98
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 156
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 157 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 214
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 215 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 153 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 208
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYG 235
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G+FG VY + K N +A+K L E++ S
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ----------LRREIEIQSHL 71
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N+LR+ ++ ++ E+ G LY L + D + + +A+ALH
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALH 128
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H + +IHRD+K N+L+ K+ DFG + + ++ + GT Y+PP
Sbjct: 129 YCHE--RKVIHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRXMCGTLDYLPP 181
Query: 295 EAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + K D++ GV+ E L GM P D
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + + +A+ALHY H + +IHRD+K N+L+ K+ DFG + +
Sbjct: 111 FDEQRSATFMEELADALHYCHE--RKVIHRDIKPENLLMGYKGELKIADFGW-----SVH 163
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGA 547
++ + GT Y+PPE + + K D++ G
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 104 GFNRKPYPRRGNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
G +K Y R K+G+G GTVY + G E+A++ +
Sbjct: 16 GDPKKKY-TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE------------ 62
Query: 163 LLFENEVQTLSQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
L NE+ + + K+ N++ L L + + +V EY+ GSL D V +D
Sbjct: 63 -LIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEG 116
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--SETSNMK 278
+ ++ +AL +LHS +IHRD+KS N+LL + KL DFG E S
Sbjct: 117 QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174
Query: 279 TMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 337
TM GT +M PE + + K D++S G++ +E++ G P + N + YL+
Sbjct: 175 TM-----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
Query: 338 EQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
P + N + + +C + +KR S ++++
Sbjct: 230 TNGTPELQ---------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--SET 509
+D + ++ +AL +LHS +IHRD+KS N+LL + KL DFG E
Sbjct: 113 MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 510 SNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
S TM GT +M PE + + K D++S G
Sbjct: 171 SKRSTM-----VGTPYWMAPEVVTRKAYGPKVDIWSLG 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 32/207 (15%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG GQFG V+ ++AVKT++ + + F E +
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMK--------------PGSMSVEAFLAEANVMKT 233
Query: 175 CKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRL-ARVNNTPPLDSNKRYSIALGVAEAL 233
+H L++L + I+ E+M GSL D L + + PL K + +AE +
Sbjct: 234 LQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGM 291
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
++ + IHRD+++AN+L+ + V K+ DFG+ ++ +K +
Sbjct: 292 AFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK------------WTA 337
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLT 319
PEA++ + K+DV+S+G++L+E++T
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVT 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+AE + ++ + IHRD+++AN+L+ + V K+ DFG+ ++ +K
Sbjct: 287 IAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK---------- 334
Query: 524 RPYMPPEAMH-CQISTKTDVFSYG 546
+ PEA++ + K+DV+S+G
Sbjct: 335 --WTAPEAINFGSFTIKSDVWSFG 356
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 27/216 (12%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 88
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 146
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G P
Sbjct: 147 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GGKIPI 202
Query: 291 -YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 143 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 198
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYG 225
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ +EA++ +
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI------------M 84
Query: 173 SQCKHVNLLRLLGL---CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
Q H N++ L G+ C +M I+ EYM NGSL D R N+ + + G+
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVM--IITEYMENGSL-DAFLRKNDGR-FTVIQLVGMLRGI 140
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ YL +S +HRD+ + N+L++ N V K+ DFG+ ++ E T
Sbjct: 141 GSGMKYLSDMSA--VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 290 PYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + + ++ +DV+SYG+++ E+++ G +P D
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 237
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+ + YL +S +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 139 GIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEAAYTTR-GG 194
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 195 KIPIRWTAPEAIAYRKFTSASDVWSYG 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 56/291 (19%)
Query: 56 QHNQKIKFKLPDKKWLQEVIQQEEANNKTEYIGELIAFTFCDLERATDGFNRK-PYPRR- 113
++ QK K+++ +W ++I+ E N ++TF D + +N K +PR
Sbjct: 5 KYKQKPKYQV---RW--KIIESYEGN----------SYTFIDPTQLP--YNEKWEFPRNN 47
Query: 114 ---GNKLGEGQFGTVY------YGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
G LG G FG V GK +++AVK L+ EA M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE-----KEALM----- 97
Query: 165 FENEVQTLSQC-KHVNLLRLLGLCNNIMNCIVY-EYMCNGSLYDRLARV-------NNTP 215
+E++ +S +H N++ LLG C + +V EY C G L + L R +
Sbjct: 98 --SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 216 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSET 274
PL+ + VA+ + +L SK IHRDV + NVLL V K+GDFG+ + +
Sbjct: 156 PLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 275 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKP 323
SN + N +M PE++ C + ++DV+SYG++L E+ + G+ P
Sbjct: 214 SNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 262
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSE 508
PL+ + VA+ + +L SK IHRDV + NVLL V K+GDFG+ + M++
Sbjct: 156 PLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 509 TSNVKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYG 546
++ + N +M PE++ C + ++DV+SYG
Sbjct: 214 SNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV EYM NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 108 KPYPRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K + +R LGEG FG V + G ++AVK+L+ E+ I
Sbjct: 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK------------PESGGNHI 67
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLC-----NNIMNCIVYEYMCNGSLYDRLARVNNTPPL 217
+ E++ L H N+++ G+C N I ++ E++ +GSL + L + N L
Sbjct: 68 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYLPKNKNKINL 125
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
+Y++ + + + YL S + +HRD+ + NVL++ K+GDFG+ K ET
Sbjct: 126 KQQLKYAVQ--ICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
Query: 278 KTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT 319
++ + PE M + +DV+S+GV L ELLT
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A+ + + + YL S + +HRD+ + NVL++ K+GDFG+ K ET ++
Sbjct: 132 AVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 521 TGTRPYMPPEA-MHCQISTKTDVFSYGAQI 549
+ PE M + +DV+S+G +
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 104 GFNRKPYPRRGNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
G +K Y R K+G+G GTVY + G E+A++ +
Sbjct: 17 GDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE------------ 63
Query: 163 LLFENEVQTLSQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
L NE+ + + K+ N++ L L + + +V EY+ GSL D V +D
Sbjct: 64 -LIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEG 117
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
+ ++ +AL +LHS +IHRD+KS N+LL + KL DFG K
Sbjct: 118 QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-- 173
Query: 281 YTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
+ GT +M PE + + K D++S G++ +E++ G P + N + YL+
Sbjct: 174 -RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 340 EVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
P + N + + +C + +KR S ++++
Sbjct: 233 GTPELQ---------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D + ++ +AL +LHS +IHRD+KS N+LL + KL DFG
Sbjct: 114 MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
K + GT +M PE + + K D++S G
Sbjct: 172 SK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 108 KPYPRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K + +R LGEG FG V + G ++AVK+L+ E+ I
Sbjct: 8 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK------------PESGGNHI 55
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLC-----NNIMNCIVYEYMCNGSLYDRLARVNNTPPL 217
+ E++ L H N+++ G+C N I ++ E++ +GSL + L + N L
Sbjct: 56 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYLPKNKNKINL 113
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
+Y++ + + + YL S + +HRD+ + NVL++ K+GDFG+ K ET
Sbjct: 114 KQQLKYAVQ--ICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 169
Query: 278 KTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT 319
++ + PE M + +DV+S+GV L ELLT
Sbjct: 170 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A+ + + + YL S + +HRD+ + NVL++ K+GDFG+ K ET ++
Sbjct: 120 AVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 521 TGTRPYMPPEA-MHCQISTKTDVFSYGAQI 549
+ PE M + +DV+S+G +
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ +EA++ +
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI------------M 69
Query: 173 SQCKHVNLLRLLGL---CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
Q H N++ L G+ C +M I+ EYM NGSL D R N+ + + G+
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVM--IITEYMENGSL-DAFLRKNDGR-FTVIQLVGMLRGI 125
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ YL +S +HRD+ + N+L++ N V K+ DFG+ ++ E T
Sbjct: 126 GSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 290 PYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + + ++ +DV+SYG+++ E+++ G +P D
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 222
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+ + YL +S +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 124 GIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEAAYTTR-GG 179
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYG 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 27/219 (12%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ +EA++ +
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI------------M 63
Query: 173 SQCKHVNLLRLLGL---CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
Q H N++ L G+ C +M I+ EYM NGSL D R N+ + + G+
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVM--IITEYMENGSL-DAFLRKNDGR-FTVIQLVGMLRGI 119
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ YL +S +HRD+ + N+L++ N V K+ DFG+ ++ E T
Sbjct: 120 GSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 290 PYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 326
+ PEA+ + + ++ +DV+SYG+++ E+++ G +P D
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 216
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+ + YL +S +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 118 GIGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEAAYTTR-GG 173
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYG 200
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 45/226 (19%)
Query: 117 LGEGQFGTVYYGKLKNG---MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+GEG FG V ++K M+ A+K ++ F E++ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD------------FAGELEVL- 76
Query: 174 QCK---HVNLLRLLGLCNNIMNC-IVYEYMCNGSLYD--RLARVNNTPP----------- 216
CK H N++ LLG C + + EY +G+L D R +RV T P
Sbjct: 77 -CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
L S + A VA + YL K IHR++ + N+L+ EN+V K+ DFG+ + E
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQ--KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 277 MKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
KTM G P +M E+++ + +T +DV+SYGV+L E+++
Sbjct: 194 KKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S + A VA + YL K IHR++ + N+L+ EN+V K+ DFG+ + E
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQ--KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
KTM G P +M E+++ + +T +DV+SYG
Sbjct: 194 KKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYG 225
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 104 GFNRKPYPRRGNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
G +K Y R K+G+G GTVY + G E+A++ +
Sbjct: 16 GDPKKKY-TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE------------ 62
Query: 163 LLFENEVQTLSQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
L NE+ + + K+ N++ L L + + +V EY+ GSL D V +D
Sbjct: 63 -LIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEG 116
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
+ ++ +AL +LHS +IHRD+KS N+LL + KL DFG K
Sbjct: 117 QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-- 172
Query: 281 YTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
+ GT +M PE + + K D++S G++ +E++ G P + N + YL+
Sbjct: 173 -RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 340 EVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
P + N + + +C + +KR S ++++
Sbjct: 232 GTPELQ---------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 268
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D + ++ +AL +LHS +IHRD+KS N+LL + KL DFG
Sbjct: 113 MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
K + GT +M PE + + K D++S G
Sbjct: 171 SK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 104 GFNRKPYPRRGNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
G +K Y R K+G+G GTVY + G E+A++ +
Sbjct: 17 GDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE------------ 63
Query: 163 LLFENEVQTLSQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
L NE+ + + K+ N++ L L + + +V EY+ GSL D V +D
Sbjct: 64 -LIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEG 117
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--SETSNMK 278
+ ++ +AL +LHS +IHR++KS N+LL + KL DFG E S
Sbjct: 118 QIAAVCRECLQALEFLHS--NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 175
Query: 279 TMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 337
TM GT +M PE + + K D++S G++ +E++ G P + N + YL+
Sbjct: 176 TM-----VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
Query: 338 EQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
P + N + + +C + +KR S ++++
Sbjct: 231 TNGTPELQ---------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELI 269
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--SET 509
+D + ++ +AL +LHS +IHR++KS N+LL + KL DFG E
Sbjct: 114 MDEGQIAAVCRECLQALEFLHS--NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 510 SNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
S TM GT +M PE + + K D++S G
Sbjct: 172 SKRSTM-----VGTPYWMAPEVVTRKAYGPKVDIWSLG 204
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 104 GFNRKPYPRRGNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPI 162
G +K Y R K+G+G GTVY + G E+A++ +
Sbjct: 16 GDPKKKY-TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE------------ 62
Query: 163 LLFENEVQTLSQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
L NE+ + + K+ N++ L L + + +V EY+ GSL D V +D
Sbjct: 63 -LIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLAGGSLTD----VVTETCMDEG 116
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
+ ++ +AL +LHS +IHRD+KS N+LL + KL DFG K
Sbjct: 117 QIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-- 172
Query: 281 YTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
+ GT +M PE + + K D++S G++ +E++ G P + N + YL+
Sbjct: 173 -RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 340 EVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
P + N + + +C + +KR S ++++
Sbjct: 232 GTPELQ---------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D + ++ +AL +LHS +IHRD+KS N+LL + KL DFG
Sbjct: 113 MDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
K + GT +M PE + + K D++S G
Sbjct: 171 SK---RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
Query: 92 AFTFCDLERATDGFNRK-PYPRR----GNKLGEGQFGTVY------YGKLKNGMEIAVKT 140
++TF D + +N K +PR G LG G FG V GK +++AVK
Sbjct: 18 SYTFIDPTQLP--YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 75
Query: 141 LEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNNIMNCIVY-EY 198
L+ EA M +E++ +S +H N++ LLG C + +V EY
Sbjct: 76 LKSTAHADE-----KEALM-------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123
Query: 199 MCNGSLYDRLARV-------NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 251
C G L + L R + PL+ + VA+ + +L SK IHRDV +
Sbjct: 124 CCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAAR 181
Query: 252 NVLLDENFVPKLGDFGIVK-MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
NVLL V K+GDFG+ + + SN + N +M PE++ C + ++DV+S
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWS 239
Query: 310 YGVILLELLT-GMKP 323
YG++L E+ + G+ P
Sbjct: 240 YGILLWEIFSLGLNP 254
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSE 508
PL+ + VA+ + +L SK IHRDV + NVLL V K+GDFG+ + M++
Sbjct: 148 PLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
Query: 509 TSNVKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYG 546
++ + N +M PE++ C + ++DV+SYG
Sbjct: 206 SNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G+ LG G FG V GK + G ++AVK L ++ + E+Q L
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR----------SLDVVGKIRREIQNL 70
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+H ++++L + + + +V EY+ G L+D + + LD + + +
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILS 127
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ Y H ++HRD+K NVLLD + K+ DFG+ M + G+ Y
Sbjct: 128 GVDYCHR--HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRXSCGSPNY 181
Query: 292 MPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNNT 329
PE + ++ + D++S GVIL LL G P DD++
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI- 536
++HRD+K NVLLD + K+ DFG+ M + G+ Y PE + ++
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRXSCGSPNYAAPEVISGRLY 192
Query: 537 -STKTDVFSYGA 547
+ D++S G
Sbjct: 193 AGPEVDIWSSGV 204
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G+ LG G FG V G+ + G ++AVK L ++ + + E+Q L
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR----------SLDVVGKIKREIQNL 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+H ++++L + + + +V EY+ G L+D + + +++ + + L +
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
H ++HRD+K NVLLD + K+ DFG+ M + + G+ Y
Sbjct: 126 YCH-----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRDSCGSPNY 176
Query: 292 MPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNNT 329
PE + ++ + D++S GVIL LL G P DD +
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H ++HRD+K NVLLD + K+ DFG+ M + + G+
Sbjct: 120 ILSAVDYCHR--HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRDSCGS 173
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGA 547
Y PE + ++ + D++S G
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGV 199
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 66/299 (22%)
Query: 56 QHNQKIKFKLPDKKWLQEVIQQEEANNKTEYIGELIAFTFCDLERATDGFNRK-PYPRR- 113
++ QK K+++ +W ++I+ E N ++TF D + +N K +PR
Sbjct: 5 KYKQKPKYQV---RW--KIIESYEGN----------SYTFIDPTQLP--YNEKWEFPRNN 47
Query: 114 ---GNKLGEGQFGTVY------YGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
G LG G FG V GK +++AVK L+ EA M
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE-----KEALM----- 97
Query: 165 FENEVQTLSQC-KHVNLLRLLGLCNNIMNCIVY-EYMCNGSLYDRLARVNNTPP------ 216
+E++ +S +H N++ LLG C + +V EY C G L + L R PP
Sbjct: 98 --SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR--KRPPGLEYSY 153
Query: 217 ---------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 267
L S + VA+ + +L SK IHRDV + NVLL V K+GDFG
Sbjct: 154 NPSHNPEEQLSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFG 211
Query: 268 IVK-MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKP 323
+ + + SN + N +M PE++ C + ++DV+SYG++L E+ + G+ P
Sbjct: 212 LARDIMNDSNY--IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 268
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
VA+ + +L SK IHRDV + NVLL V K+GDFG+ + M++++ + N
Sbjct: 175 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNAR 229
Query: 522 GTRPYMPPEAMH-CQISTKTDVFSYG 546
+M PE++ C + ++DV+SYG
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYG 255
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 34/221 (15%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNEA 73
Query: 170 QTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLDS 219
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 74 SVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + ++
Sbjct: 132 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 280 MYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLT 319
+ L R +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 190 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
P +K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+ + L R +M PE++ + +T +DV+S+G
Sbjct: 186 DXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFG 221
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 34/221 (15%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNEA 64
Query: 170 QTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLDS 219
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 65 SVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + ++
Sbjct: 123 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 280 MYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLT 319
+ L R +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 181 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
P +K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+ + L R +M PE++ + +T +DV+S+G
Sbjct: 177 DXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFG 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K G E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE-------IEREVNIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ +H N++ L + N + + + E + G L+D LA L ++ + +
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA---EKESLTEDEATQFLKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
+HYLHS K I H D+K N++L + VP KL DFGI E N +N+ G
Sbjct: 127 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + +HYLHS K I H D+K N++L + VP KL DFGI E N +N
Sbjct: 124 ILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYG 546
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIG 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV E M NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP- 290
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G P
Sbjct: 159 GMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GGKIPI 214
Query: 291 -YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
+ PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K G E A K ++ E E EV L
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE-------IEREVNIL 62
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ +H N++ L + N + + + E + G L+D LA L ++ + +
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA---EKESLTEDEATQFLKQILD 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
+HYLHS K I H D+K N++L + VP KL DFGI E N +N+ G
Sbjct: 120 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFG 173
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + +HYLHS K I H D+K N++L + VP KL DFGI E N +N
Sbjct: 117 ILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKN 170
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYG 546
+ GT ++ PE ++ + + + D++S G
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIG 198
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 64
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 123 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 110 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 166 DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
GN LG+G F VY + + G+E+A+K ++ +A M+ + +NEV+
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY--------KAGMVQRV--QNEVKIH 65
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
Q KH ++L L + + MC+ +R + N P N+ +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK-NRVKPFSENEARHFMHQIITG 124
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YLHS I+HRD+ +N+LL N K+ DFG+ + + K YT L GT Y+
Sbjct: 125 MLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH-YT--LCGTPNYI 179
Query: 293 PPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDN 327
PE A ++DV+S G + LL G P D +
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 447 NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 506
N P N+ + + YLHS I+HRD+ +N+LL N K+ DFG+
Sbjct: 104 NRVKPFSENEARHFMHQIITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQ 161
Query: 507 SETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGAQIKT 551
+ + K YT L GT Y+ PE A ++DV+S G T
Sbjct: 162 LKMPHEKH-YT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G+ LG G FG V G+ + G ++AVK L ++ + + E+Q L
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR----------SLDVVGKIKREIQNL 65
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+H ++++L + + + +V EY+ G L+D + + +++ + + L +
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
H ++HRD+K NVLLD + K+ DFG+ M + G+ Y
Sbjct: 126 YCH-----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRTSCGSPNY 176
Query: 292 MPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNNT 329
PE + ++ + D++S GVIL LL G P DD +
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H ++HRD+K NVLLD + K+ DFG+ M + G+
Sbjct: 120 ILSAVDYCHR--HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----FLRTSCGS 173
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGA 547
Y PE + ++ + D++S G
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGV 199
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 74
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 132
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 133 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 120 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 176 DHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 31/218 (14%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 71
Query: 173 SQCKHVNLLRLLGLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
Q H N++RL G+ +M IV E M NGSL D R ++ + + G+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVM--IVTEXMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGI 127
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 128 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GGKI 183
Query: 290 P--YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
P + PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 126 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 181
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYG 208
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K G E A K ++ E E EV L
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREE-------IEREVNIL 83
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ +H N++ L + N + + + E + G L+D LA L ++ + +
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA---EKESLTEDEATQFLKQILD 140
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
+HYLHS K I H D+K N++L + VP KL DFGI E N +N+ G
Sbjct: 141 GVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKNIFG 194
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + +HYLHS K I H D+K N++L + VP KL DFGI E N +N
Sbjct: 138 ILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----EFKN 191
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYG 546
+ GT ++ PE ++ + + + D++S G
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIG 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 68
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 127 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 114 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 170 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD------------FLGEASIM 100
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++RL G+ IV E M NGSL D R ++ + + G+A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 159 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 216
Query: 292 MPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + ++ +DV+SYG++L E+++ G +P
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 155 GIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 210
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYG 237
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 64
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 123 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 110 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 68
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 127 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 114 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 170 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 64
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 123 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 110 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 116 KLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
KLG+G FG V G+ + +AVK L+ F EV
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD----------FIREVNA 74
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H NL+RL G+ +V E GSL DRL + L + RY++ VAE
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAE 132
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL S K IHRD+ + N+LL + K+GDFG+++ ++ + E+ +
Sbjct: 133 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PE++ + S +D + +GV L E+ T G +P
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + RY++ VAE + YL S K IHRD+ + N+LL + K+GDFG+++ ++
Sbjct: 120 LGTLSRYAVQ--VAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQI 549
+ E+ + PE++ + S +D + +G +
Sbjct: 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 117 LGEGQFGTVYYG----KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G+G FG VY+G + +N ++ A+K+L TE + L E + +
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI----------TEMQQVEAFLREGLL--M 76
Query: 173 SQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
H N+L L+G L + ++ YMC+G L + P + S L VA
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVA 134
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-----------VKMSETSNMKT 279
+ YL + +HRD+ + N +LDE+F K+ DFG+ V+ + +
Sbjct: 135 RGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 280 MYT--ENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKP 323
+T E+L R +TK+DV+S+GV+L ELLT P
Sbjct: 193 KWTALESLQTYR-----------FTTKSDVWSFGVLLWELLTRGAP 227
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK---MSETSNVKTM 515
S L VA + YL + +HRD+ + N +LDE+F K+ DFG+ + E +V+
Sbjct: 128 SFGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH 185
Query: 516 YTENLTGTRPYMPPEAMHC-QISTKTDVFSYG 546
L + E++ + +TK+DV+S+G
Sbjct: 186 RHARLPVK--WTALESLQTYRFTTKSDVWSFG 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNE 65
Query: 169 VQTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLD 218
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 66 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNM 277
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 124 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-- 179
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 180 --YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 37/183 (20%)
Query: 379 ASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII----L 430
ASMR+ ++ L+++ F C+ + L +G VS G P ++ +
Sbjct: 54 ASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIMELM 97
Query: 431 DTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
G+ K + N P P +K +A +A+ + YL++ +HRD+ + N
Sbjct: 98 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARN 155
Query: 488 VLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVF 543
++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +DV+
Sbjct: 156 CMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 544 SYG 546
S+G
Sbjct: 212 SFG 214
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 22 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNE 69
Query: 169 VQTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLD 218
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 70 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNM 277
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 128 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-- 183
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 184 --YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 37/183 (20%)
Query: 379 ASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII----L 430
ASMR+ ++ L+++ F C+ + L +G VS G P ++ +
Sbjct: 58 ASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIMELM 101
Query: 431 DTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
G+ K + N P P +K +A +A+ + YL++ +HRD+ + N
Sbjct: 102 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARN 159
Query: 488 VLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVF 543
++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +DV+
Sbjct: 160 CMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 215
Query: 544 SYG 546
S+G
Sbjct: 216 SFG 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 40/225 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNE 68
Query: 169 VQTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYD-----RLARVNNT--PPLD 218
+ + C HV +RLLG+ + ++ E M G L R A NN P
Sbjct: 69 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNM 277
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 127 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-- 182
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 183 --YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 37/183 (20%)
Query: 379 ASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII----L 430
ASMR+ ++ L+++ F C+ + L +G VS G P ++ +
Sbjct: 57 ASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIMELM 100
Query: 431 DTGETKQ-CQLFKLARVNNT--PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
G+ K + + A NN P +K +A +A+ + YL++ +HRD+ + N
Sbjct: 101 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARN 158
Query: 488 VLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVF 543
++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +DV+
Sbjct: 159 CMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 214
Query: 544 SYG 546
S+G
Sbjct: 215 SFG 217
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNE 71
Query: 169 VQTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLD 218
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 72 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNM 277
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 130 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-- 185
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 186 --YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 37/183 (20%)
Query: 379 ASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII----L 430
ASMR+ ++ L+++ F C+ + L +G VS G P ++ +
Sbjct: 60 ASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIMELM 103
Query: 431 DTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
G+ K + N P P +K +A +A+ + YL++ +HRD+ + N
Sbjct: 104 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARN 161
Query: 488 VLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVF 543
++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +DV+
Sbjct: 162 CMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 217
Query: 544 SYG 546
S+G
Sbjct: 218 SFG 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNE 72
Query: 169 VQTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLD 218
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 73 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNM 277
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 131 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-- 186
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 187 --YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 37/183 (20%)
Query: 379 ASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII----L 430
ASMR+ ++ L+++ F C+ + L +G VS G P ++ +
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIMELM 104
Query: 431 DTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
G+ K + N P P +K +A +A+ + YL++ +HRD+ + N
Sbjct: 105 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARN 162
Query: 488 VLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVF 543
++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +DV+
Sbjct: 163 CMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 218
Query: 544 SYG 546
S+G
Sbjct: 219 SFG 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
KLG G FG V+ + ++ G+E +KT+ + + +P+ E E++ L
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTIN------------KDRSQVPMEQIEAEIEVLK 75
Query: 174 QCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAE 231
H N++++ + + N IV E G L +R+ L + +
Sbjct: 76 SLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN 135
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDEN--FVP-KLGDFGIVKMSETSNMKTMYTENLTGT 288
AL Y HS + ++H+D+K N+L + P K+ DFG+ ++ ++ T N GT
Sbjct: 136 ALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST----NAAGT 189
Query: 289 RPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
YM PE ++ K D++S GV++ LLTG P
Sbjct: 190 ALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDEN--FVP-KLGDFGIVKMSETSNVKTMYTENLTGT 523
AL Y HS + ++H+D+K N+L + P K+ DFG+ ++ ++ ++ N GT
Sbjct: 136 ALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----HSTNAAGT 189
Query: 524 RPYMPPEAMHCQISTKTDVFSYG 546
YM PE ++ K D++S G
Sbjct: 190 ALYMAPEVFKRDVTFKCDIWSAG 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 40/224 (17%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNEA 72
Query: 170 QTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLDS 219
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 73 SVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 131 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD--- 185
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 186 -YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 376 DKRASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII-- 429
++ ASMR+ ++ L+++ F C+ + L +G VS G P ++
Sbjct: 57 NEAASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIM 100
Query: 430 --LDTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 484
+ G+ K + N P P +K +A +A+ + YL++ +HRD+
Sbjct: 101 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLA 158
Query: 485 SANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKT 540
+ N ++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +
Sbjct: 159 ARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 541 DVFSYG 546
DV+S+G
Sbjct: 215 DVWSFG 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 40/224 (17%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNEA 79
Query: 170 QTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYD-----RLARVNNT--PPLDS 219
+ + C HV +RLLG+ + ++ E M G L R A NN P
Sbjct: 80 SVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 138 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD--- 192
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 193 -YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 37/186 (19%)
Query: 376 DKRASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII-- 429
++ ASMR+ ++ L+++ F C+ + L +G VS G P ++
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIM 107
Query: 430 --LDTGETKQ-CQLFKLARVNNT--PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 484
+ G+ K + + A NN P +K +A +A+ + YL++ +HRD+
Sbjct: 108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLA 165
Query: 485 SANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKT 540
+ N ++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +
Sbjct: 166 ARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 541 DVFSYG 546
DV+S+G
Sbjct: 222 DVWSFG 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 40/224 (17%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNEA 79
Query: 170 QTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLDS 219
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 80 SVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 138 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD--- 192
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 193 -YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 376 DKRASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII-- 429
++ ASMR+ ++ L+++ F C+ + L +G VS G P ++
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIM 107
Query: 430 --LDTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 484
+ G+ K + N P P +K +A +A+ + YL++ +HRD+
Sbjct: 108 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLA 165
Query: 485 SANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKT 540
+ N ++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +
Sbjct: 166 ARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 541 DVFSYG 546
DV+S+G
Sbjct: 222 DVWSFG 227
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + M +A+KT + F E
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK------------FLQEA 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 120
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 174
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 117 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 170
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFG 199
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + M +A+KT + F E
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK------------FLQEA 442
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
A L YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 503 A--LAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 554
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 497 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 550
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFG 579
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 82
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 83 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEYSYNP 131
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 190 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 139 LSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 194
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 195 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 40/224 (17%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNEA 101
Query: 170 QTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLDS 219
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 102 SVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+K +A +A+ + YL++ +HRD+ + N ++ E+F K+GDFG+ + + ET
Sbjct: 160 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD--- 214
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 215 -YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 37/186 (19%)
Query: 376 DKRASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII-- 429
++ ASMR+ ++ L+++ F C+ + L +G VS G P ++
Sbjct: 86 NEAASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIM 129
Query: 430 --LDTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 484
+ G+ K + N P P +K +A +A+ + YL++ +HRD+
Sbjct: 130 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLA 187
Query: 485 SANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKT 540
+ N ++ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +
Sbjct: 188 ARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYS 243
Query: 541 DVFSYG 546
DV+S+G
Sbjct: 244 DVWSFG 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 83
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 84 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEYSYNP 132
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 191 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 140 LSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 195
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 196 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 79
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 80 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEYSYNP 128
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 187 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 136 LSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 191
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 192 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 90
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 91 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--AREPPGLEYSYNP 139
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 198 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 202
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 203 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 90
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 91 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEYSYNP 139
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 198 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 202
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 203 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 75
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 76 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEYCYNP 124
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 183 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL SK IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 132 LSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 187
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 188 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 49/241 (20%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTR---PYMPPEAMHCQIST-KTDVFSYGVILLELL 318
+ DFG+ + + +N+ Y +N T R +M PEA+ ++ T ++DV+S+GV++ E+
Sbjct: 198 IADFGLAR--DINNID--YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 319 T 319
T
Sbjct: 254 T 254
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y +N T
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID--YYKNTTNG 219
Query: 524 R---PYMPPEAMHCQIST-KTDVFSYG 546
R +M PEA+ ++ T ++DV+S+G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 167 NEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARV-----NNTPPLDSN 220
E+Q +SQC H N++ +V + + GS+ D + + + + LD +
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN--MK 278
+I V E L YLH + IHRDVK+ N+LL E+ ++ DFG+ T +
Sbjct: 122 TIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 279 TMYTENLTGTRPYMPPEAMHCQIST---KTDVFSYGVILLELLTGMKPIDDNNTILYYYL 335
+ GT +M PE M Q+ K D++S+G+ +EL TG P + L
Sbjct: 180 NKVRKTFVGTPCWMAPEVME-QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238
Query: 336 VVEQEVPVRE--VLDKE 350
++ + P E V DKE
Sbjct: 239 TLQNDPPSLETGVQDKE 255
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD + +I V E L YLH + IHRDVK+ N+LL E+ ++ DFG+ T
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175
Query: 512 --VKTMYTENLTGTRPYMPPEAMHCQIST---KTDVFSYGAQIKTQHITNVDIA 560
+ + GT +M PE M Q+ K D++S+G IT +++A
Sbjct: 176 DITRNKVRKTFVGTPCWMAPEVME-QVRGYDFKADIWSFG-------ITAIELA 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 167 NEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARV-----NNTPPLDSN 220
E+Q +SQC H N++ +V + + GS+ D + + + + LD +
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN--MK 278
+I V E L YLH + IHRDVK+ N+LL E+ ++ DFG+ T +
Sbjct: 117 TIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 279 TMYTENLTGTRPYMPPEAMHCQIST---KTDVFSYGVILLELLTGMKPIDDNNTILYYYL 335
+ GT +M PE M Q+ K D++S+G+ +EL TG P + L
Sbjct: 175 NKVRKTFVGTPCWMAPEVME-QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 233
Query: 336 VVEQEVPVRE--VLDKE 350
++ + P E V DKE
Sbjct: 234 TLQNDPPSLETGVQDKE 250
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD + +I V E L YLH + IHRDVK+ N+LL E+ ++ DFG+ T
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 170
Query: 512 --VKTMYTENLTGTRPYMPPEAMHCQIST---KTDVFSYGAQIKTQHITNVDIA 560
+ + GT +M PE M Q+ K D++S+G IT +++A
Sbjct: 171 DITRNKVRKTFVGTPCWMAPEVME-QVRGYDFKADIWSFG-------ITAIELA 216
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 90
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 91 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEYCYNP 139
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL S K IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 198 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL S K IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 202
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 203 I-DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 26/251 (10%)
Query: 99 ERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAA 158
E T N + + +LG+G FG VY + K +A + E
Sbjct: 27 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV-----IDTKSEEELEDY 81
Query: 159 MIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLD 218
M+ E+ L+ C H N+++LL N + C G D + + PL
Sbjct: 82 MV-------EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLT 133
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 278
++ + +AL+YLH IIHRD+K+ N+L + KL DFG+ N +
Sbjct: 134 ESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTR 187
Query: 279 TMY-TENLTGTRPYMPPEAMHCQIST------KTDVFSYGVILLELLTGMKPIDDNNTIL 331
T+ ++ GT +M PE + C+ S K DV+S G+ L+E+ P + N +
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 332 YYYLVVEQEVP 342
+ + E P
Sbjct: 248 VLLKIAKSEPP 258
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL ++ + +AL+YLH IIHRD+K+ N+L + KL DFG+
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV----SAK 184
Query: 511 NVKTMY-TENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQ 569
N +T+ ++ GT +M PE + C+ S K + Y A + + IT +++A+ E
Sbjct: 185 NTRTIQRRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIE------ 237
Query: 570 TMLPGHHE 577
P HHE
Sbjct: 238 ---PPHHE 242
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G+G++G V+ GK + G ++AVK TE A E E+
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVF-----------FTTEEAS---WFRETEIYQTVL 87
Query: 175 CKHVNLLRLL-----GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
+H N+L + G + ++ +Y NGSLYD L + LD+ +A
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSS 143
Query: 230 AEALHYLHS-----LSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYT 282
L +LH+ KP I HRD+KS N+L+ +N + D G+ VK +N +
Sbjct: 144 VSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP 203
Query: 283 ENLTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLEL 317
GT+ YMPPE + H Q D++S+G+IL E+
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 452 LDSNKRYSIALGVAEALHYLHS-----LSKPII-HRDVKSANVLLDENFVPKLGDFGI-V 504
LD+ +A L +LH+ KP I HRD+KS N+L+ +N + D G+ V
Sbjct: 131 LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190
Query: 505 KMSETSNVKTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
K +N + GT+ YMPPE + H Q D++S+G
Sbjct: 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFG 239
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 34/219 (15%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 68
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 69 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 126
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + ++
Sbjct: 127 QEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 184
Query: 280 MYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLEL 317
+ L R +M PE++ + +T +D++S+GV+L E+
Sbjct: 185 KGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEI 222
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 509
PP + +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 510 SNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
++ + L R +M PE++ + +T +D++S+G
Sbjct: 180 TDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFG 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 104/250 (41%), Gaps = 24/250 (9%)
Query: 99 ERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAA 158
E T N + + +LG+G FG VY + K +A + E
Sbjct: 27 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV-----IDTKSEEELEDY 81
Query: 159 MIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLD 218
M+ E+ L+ C H N+++LL N + C G D + + PL
Sbjct: 82 MV-------EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLT 133
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 278
++ + +AL+YLH IIHRD+K+ N+L + KL DFG+ S +
Sbjct: 134 ESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV---SAKNTRX 188
Query: 279 TMYTENLTGTRPYMPPEAMHCQIST------KTDVFSYGVILLELLTGMKPIDDNNTILY 332
++ GT +M PE + C+ S K DV+S G+ L+E+ P + N +
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 333 YYLVVEQEVP 342
+ + E P
Sbjct: 249 LLKIAKSEPP 258
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL ++ + +AL+YLH IIHRD+K+ N+L + KL DFG+ S +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV---SAKN 185
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQT 570
++ GT +M PE + C+ S K + Y A + + IT +++A+ E
Sbjct: 186 TRXIQRRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIE------- 237
Query: 571 MLPGHHE 577
P HHE
Sbjct: 238 --PPHHE 242
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIP--ILLFENEVQ 170
G LG G V+ + L++ ++AVK L + A P L F E Q
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLR------------ADLARDPSFYLRFRREAQ 64
Query: 171 TLSQCKHVNLLRLLGLCN-----NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
+ H ++ + + IV EY+ +L D V+ P+ + +
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEV 121
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
+AL++ H IIHRDVK AN+L+ K+ DFGI + S T +
Sbjct: 122 IADACQALNFSHQ--NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 286 TGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVEQEVP 342
GT Y+ PE A + ++DV+S G +L E+LTG P ++ + + Y V E +P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 446 VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 505
V+ P+ + + +AL++ H IIHRDVK AN+L+ K+ DFGI +
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANILISATNAVKVVDFGIAR 164
Query: 506 MSETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
S T + GT Y+ PE A + ++DV+S G
Sbjct: 165 AIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 115 NKLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE 168
+LG+G FG VY G K ++ +A+KT+ A+M + F NE
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------------ASMRERIEFLNE 65
Query: 169 VQTLSQ--CKHVNLLRLLGLCNNIM-NCIVYEYMCNGSL--YDRLAR--VNNTP---PLD 218
+ + C HV +RLLG+ + ++ E M G L Y R R + N P P
Sbjct: 66 ASVMKEFNCHHV--VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNM 277
+K +A +A+ + YL++ +HRD+ + N + E+F K+GDFG+ + + ET
Sbjct: 124 LSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD-- 179
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +DV+S+GV+L E+ T
Sbjct: 180 --YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 37/183 (20%)
Query: 379 ASMRDIVDLLSKSM----FVCNSLANLYVGKVSSRTQENNNINWELHYTGIPVII----L 430
ASMR+ ++ L+++ F C+ + L +G VS G P ++ +
Sbjct: 54 ASMRERIEFLNEASVMKEFNCHHVVRL-LGVVSQ---------------GQPTLVIMELM 97
Query: 431 DTGETKQCQLFKLARVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
G+ K + N P P +K +A +A+ + YL++ +HRD+ + N
Sbjct: 98 TRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARN 155
Query: 488 VLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVF 543
+ E+F K+GDFG+ + + ET Y + G P +M PE++ + +T +DV+
Sbjct: 156 CXVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 211
Query: 544 SYG 546
S+G
Sbjct: 212 SFG 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 34/219 (15%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 71
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 72 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + ++
Sbjct: 130 QEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 280 MYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLEL 317
+ L R +M PE++ + +T +D++S+GV+L E+
Sbjct: 188 KGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 509
PP + +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 510 SNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
++ + L R +M PE++ + +T +D++S+G
Sbjct: 183 TDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFG 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + + +A+KT + F E
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK------------FLQEA 59
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 117
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 118 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 171
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 114 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 167
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 168 KGKLPIKWMAPESINFRRFTSASDVWMFG 196
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 13/182 (7%)
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
FE EV SQ H N++ ++ + + +C +V EY+ +L + + + PL +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDV-DEEDDCYYLVMEYIEGPTLSEY---IESHGPLSVDTA 113
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMY 281
+ + + + + H + I+HRD+K N+L+D N K+ DFGI K +SETS +T +
Sbjct: 114 INFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171
Query: 282 TENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ GT Y PE + + + TD++S G++L E+L G P + + ++
Sbjct: 172 ---VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDS 228
Query: 341 VP 342
VP
Sbjct: 229 VP 230
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSET 509
PL + + + + + + H + I+HRD+K N+L+D N K+ DFGI K +SET
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164
Query: 510 SNVKTMYTENLTGTRPYMPPEAMHCQISTK-TDVFSYG 546
S +T + + GT Y PE + + + TD++S G
Sbjct: 165 SLTQTNH---VLGTVQYFSPEQAKGEATDECTDIYSIG 199
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 131
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 132 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA--RRPPGLEYSYNP 180
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL S K IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 270 KMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + Y + G P +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 239 R---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL S K IHRD+ + NVL+ E+ V K+ DFG+ + + +
Sbjct: 188 LSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHH 243
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYG 546
+ Y + G P +M PEA+ +I T ++DV+S+G
Sbjct: 244 ID-YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 34/219 (15%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 71
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 72 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + ++
Sbjct: 130 QEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 280 MYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLEL 317
+ L R +M PE++ + +T +D++S+GV+L E+
Sbjct: 188 KGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 509
PP + +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 510 SNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
++ + L R +M PE++ + +T +D++S+G
Sbjct: 183 TDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFG 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + + +A+KT + F E
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK------------FLQEA 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 120
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 174
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 117 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 170
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFG 199
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + + +A+KT + F E
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK------------FLQEA 67
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 125
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 126 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 179
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 122 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 175
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 176 KGKLPIKWMAPESINFRRFTSASDVWMFG 204
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 120
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ K +
Sbjct: 121 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEFFKVKEP 176
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ K + G
Sbjct: 123 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEFFKVKEPGE 178
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGV 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + + +A+KT + F E
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK------------FLQEA 64
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 122
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 123 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 176
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 119 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 172
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 173 KGKLPIKWMAPESINFRRFTSASDVWMFG 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + + +A+KT + F E
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK------------FLQEA 65
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 123
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 124 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 177
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 120 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 173
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 174 KGKLPIKWMAPESINFRRFTSASDVWMFG 202
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + + +A+KT + F E
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK------------FLQEA 90
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL-- 148
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y + G
Sbjct: 149 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKASKGKL 202
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S Y +
Sbjct: 145 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST----YYKAS 198
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 199 KGKLPIKWMAPESINFRRFTSASDVWMFG 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ F E +
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD------------FLGEASIM 77
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L G+ IV EYM NGSL L + N + + G++
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKK--NDGQFTVIQLVGMLRGISA 135
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ YL + +HRD+ + N+L++ N V K+ DFG+ ++ E T +
Sbjct: 136 GMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 292 MPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + ++ +DV+SYG+++ E+++ G +P
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G++ + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + YT G
Sbjct: 132 GISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTR-GG 187
Query: 523 TRP--YMPPEAMHCQ-ISTKTDVFSYG 546
P + PEA+ + ++ +DV+SYG
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYG 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMR 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V ++ DFG+ + + +N+ Y + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMRIADFGLAR--DINNID-YYKKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 24/250 (9%)
Query: 99 ERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAA 158
E T N + + +LG+G FG VY + K +A + E
Sbjct: 27 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV-----IDTKSEEELEDY 81
Query: 159 MIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLD 218
M+ E+ L+ C H N+++LL N + C G D + + PL
Sbjct: 82 MV-------EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLT 133
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 278
++ + +AL+YLH IIHRD+K+ N+L + KL DFG+ S +
Sbjct: 134 ESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV---SAKNTRX 188
Query: 279 TMYTENLTGTRPYMPPEAMHCQIST------KTDVFSYGVILLELLTGMKPIDDNNTILY 332
+ GT +M PE + C+ S K DV+S G+ L+E+ P + N +
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 333 YYLVVEQEVP 342
+ + E P
Sbjct: 249 LLKIAKSEPP 258
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL ++ + +AL+YLH IIHRD+K+ N+L + KL DFG+ S +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV---SAKN 185
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQT 570
+ GT +M PE + C+ S K + Y A + + IT +++A+ E
Sbjct: 186 TRXIQRRDXFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIE------- 237
Query: 571 MLPGHHE 577
P HHE
Sbjct: 238 --PPHHE 242
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 43/232 (18%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K K + +AVK L+ +E M+ ++
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI-- 143
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPL----DSN 220
KH N++ LLG C ++ EY G+L + L R P + D N
Sbjct: 144 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPGMEYSYDIN 193
Query: 221 K----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 270
+ S +A + YL S + IHRD+ + NVL+ EN V K+ DFG+ +
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 271 MSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 252 --DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 212 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 266
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFG 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Query: 114 GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLF 165
G LGEG FG V K ++AVK L+ +E M+ ++
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI-- 90
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP-------- 216
KH N++ LLG C ++ EY G+L + L PP
Sbjct: 91 ---------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ--ARRPPGLEFSFNP 139
Query: 217 -------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 269
L S S A VA + YL S K IHRD+ + NVL+ E+ V K+ DFG+
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 270 KMSETSNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ + T + +M PEA+ +I T ++DV+S+GV+L E+ T
Sbjct: 198 RDIHHIDXXKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S S A VA + YL S K IHRD+ + NVL+ E+ V K+ DFG+ + +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYG 546
T + +M PEA+ +I T ++DV+S+G
Sbjct: 205 XXKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFG 239
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 24 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 83
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 84 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 131
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 189
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 190 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 158 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 212
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFG 238
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 115 NKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+LG+G FG VY K K G A K +E + E++ L+
Sbjct: 17 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-------------YIVEIEILA 63
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYD----RLARVNNTPPLDSNKRYSIALGV 229
C H +++LLG + + C G D L R P + R +
Sbjct: 64 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML---- 119
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGT 288
EAL++LHS K IIHRD+K+ NVL+ +L DFG+ N+KT+ ++ GT
Sbjct: 120 -EALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGT 172
Query: 289 RPYMPPEAMHCQI------STKTDVFSYGVILLEL 317
+M PE + C+ K D++S G+ L+E+
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 17/113 (15%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYT-ENLTGTR 524
EAL++LHS K IIHRD+K+ NVL+ +L DFG+ N+KT+ ++ GT
Sbjct: 120 EALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTP 173
Query: 525 PYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHE 577
+M PE + C+ + K + Y A I + IT +++A E P HHE
Sbjct: 174 YWMAPEVVMCE-TMKDTPYDYKADIWSLGITLIEMAQIE---------PPHHE 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 115 NKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+LG+G FG VY K K G A K +E + E++ L+
Sbjct: 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED-------------YIVEIEILA 71
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYD----RLARVNNTPPLDSNKRYSIALGV 229
C H +++LLG + + C G D L R P + R +
Sbjct: 72 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML---- 127
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT-ENLTGT 288
EAL++LHS K IIHRD+K+ NVL+ +L DFG+ N+KT+ ++ GT
Sbjct: 128 -EALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGT 180
Query: 289 RPYMPPEAMHCQI------STKTDVFSYGVILLEL 317
+M PE + C+ K D++S G+ L+E+
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 17/113 (15%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYT-ENLTGTR 524
EAL++LHS K IIHRD+K+ NVL+ +L DFG+ N+KT+ ++ GT
Sbjct: 128 EALNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTP 181
Query: 525 PYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHE 577
+M PE + C+ + K + Y A I + IT +++A E P HHE
Sbjct: 182 YWMAPEVVMCE-TMKDTPYDYKADIWSLGITLIEMAQIE---------PPHHE 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 40/222 (18%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN------------ESASLRERIEFLNEA 71
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 72 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+ +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + + ET+
Sbjct: 130 QEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA--- 184
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLEL 317
Y + G P +M PE++ + +T +D++S+GV+L E+
Sbjct: 185 -YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSE 508
PP + +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + + E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 509 TSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
T+ Y + G P +M PE++ + +T +D++S+G
Sbjct: 183 TA----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIP--ILLFENEVQ 170
G LG G V+ + L++ ++AVK L + A P L F E Q
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLR------------ADLARDPSFYLRFRREAQ 64
Query: 171 TLSQCKHVNLLRLLGLCN-----NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
+ H ++ + + IV EY+ +L D V+ P+ + +
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEV 121
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
+AL++ H IIHRDVK AN+++ K+ DFGI + S T +
Sbjct: 122 IADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 286 TGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVEQEVP 342
GT Y+ PE A + ++DV+S G +L E+LTG P ++ + + Y V E +P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 446 VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 505
V+ P+ + + +AL++ H IIHRDVK AN+++ K+ DFGI +
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 506 MSETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
S T + GT Y+ PE A + ++DV+S G
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 31/221 (14%)
Query: 117 LGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+G G+FG V G+LK + +A+KTL+ EA++ +
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI------------M 98
Query: 173 SQCKHVNLLRLLGLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
Q H N++ L G+ +M IV E+M NG+L D R ++ + + G+
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVM--IVIEFMENGAL-DAFLRKHDGQ-FTVIQLVGMLRGI 154
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + +YT G
Sbjct: 155 AAGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYT-TTGGKI 210
Query: 290 P--YMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 326
P + PEA+ + + ++ +DV+SYG+++ E+++ G +P D
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 463 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
G+A + YL + +HRD+ + N+L++ N V K+ DFG+ ++ E + + +YT G
Sbjct: 153 GIAAGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYT-TTGG 208
Query: 523 TRP--YMPPEAM-HCQISTKTDVFSYG 546
P + PEA+ + + ++ +DV+SYG
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYG 235
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 21 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 80
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 81 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 128
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 186
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 187 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 155 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 209
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFG 235
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 45/239 (18%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 19 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 78
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSL--YDRLAR---- 210
M+ ++ KH N++ LLG C ++ EY G+L Y R R
Sbjct: 79 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 127
Query: 211 -----VNNTPP--LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 263
+N P + S +A + YL S + IHRD+ + NVL+ EN V K+
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLTARNVLVTENNVMKI 185
Query: 264 GDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 186 ADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 153 LARGMEYLAS--QKCIHRDLTARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 207
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFG 233
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 29/240 (12%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIP--ILLFENEVQ 170
G LG G V+ + L++ ++AVK L + A P L F E Q
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLR------------ADLARDPSFYLRFRREAQ 64
Query: 171 TLSQCKHVNLLRLLGLCN-----NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
+ H ++ + + IV EY+ +L D V+ P+ + +
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEV 121
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
+AL++ H IIHRDVK AN+++ K+ DFGI + S T +
Sbjct: 122 IADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 286 TGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPI--DDNNTILYYYLVVEQEVP 342
GT Y+ PE A + ++DV+S G +L E+LTG P D +++ Y + V E +P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQH-VREDPIP 238
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 446 VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 505
V+ P+ + + +AL++ H IIHRDVK AN+++ K+ DFGI +
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 506 MSETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
S T + GT Y+ PE A + ++DV+S G
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + M +A+KT + F E
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK------------FLQEA 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL-- 120
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ KLGDFG+ + E S Y + G
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST----YYKASKGKL 174
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ KLGDFG+ + E S Y +
Sbjct: 117 AYQLSTALAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST----YYKAS 170
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFG 199
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + M +A+KT + F E
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK------------FLQEA 442
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
A L YL S K +HRD+ + NVL+ KLGDFG+ + E S Y + G
Sbjct: 503 A--LAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST----YYKASKGKL 554
Query: 290 P--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
P +M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ KLGDFG+ + E S Y +
Sbjct: 497 AYQLSTALAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST----YYKAS 550
Query: 521 TGTRP--YMPPEAMHC-QISTKTDVFSYG 546
G P +M PE+++ + ++ +DV+ +G
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFG 579
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 65
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 123
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 124 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 179
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 126 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 181
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGV 208
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 69
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 70 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 127
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 128 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 183
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 184 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 130 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 185
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGV 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKNG-MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG+G+FG VY + K +A+K L E++
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ----------LRREIEIQ 77
Query: 173 SQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H N+LRL + ++ EY G LY L + D + +I +A+
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT---FDEQRTATIMEELAD 134
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL Y H K +IHRD+K N+LL K+ DFG + + KTM GT Y
Sbjct: 135 ALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTM-----CGTLDY 187
Query: 292 MPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
+PPE + ++ + K D++ GV+ ELL G P +
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + +I +A+AL Y H K +IHRD+K N+LL K+ DFG + +
Sbjct: 120 FDEQRTATIMEELADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR 177
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
KTM GT Y+PPE + ++ + K D++ G
Sbjct: 178 RKTM-----CGTLDYLPPEMIEGRMHNEKVDLWCIG 208
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 61
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 62 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 119
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 120 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 175
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 176 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 122 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 177
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGV 204
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 67
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 68 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 125
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 126 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 181
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 182 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 128 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 183
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGV 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G +GEGQFG V+ G + M +A+KT + F E
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK------------FLQEA 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
T+ Q H ++++L+G+ I+ E G L L + L S Y+ L
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL-- 120
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S L
Sbjct: 121 STALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK- 177
Query: 290 PYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPID--DNNTIL 331
+M PE+++ + ++ +DV+ +GV + E+L G+KP NN ++
Sbjct: 178 -WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ AL YL S K +HRD+ + NVL+ N KLGDFG+ + E S L
Sbjct: 117 AYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 521 TGTRPYMPPEAMHC-QISTKTDVFSYG 546
+M PE+++ + ++ +DV+ +G
Sbjct: 175 PIK--WMAPESINFRRFTSASDVWMFG 199
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 120
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 121 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 176
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 123 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 178
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGV 205
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 66
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 67 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 124
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 125 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 180
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 181 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 127 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 182
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGV 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 68
Query: 170 QTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 69 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 126
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 127 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 182
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 183 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 129 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 184
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGV 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 60
Query: 170 QTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 61 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 118
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 119 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 174
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 175 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 121 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 176
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGV 203
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 120
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 121 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 176
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 123 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 178
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGV 205
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 93
Query: 170 QTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 94 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 151
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 152 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 207
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 154 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 209
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGV 236
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 40/222 (18%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 71
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 72 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+ +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + + ET
Sbjct: 130 QEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD--- 184
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLEL 317
Y + G P +M PE++ + +T +D++S+GV+L E+
Sbjct: 185 -YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSE 508
PP + +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + + E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 509 TSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
T Y + G P +M PE++ + +T +D++S+G
Sbjct: 183 TD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 80
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 81 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 138
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 139 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 194
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 141 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 196
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGV 223
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 80
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 81 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 138
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 139 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 194
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 141 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 196
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGV 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 63
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + + +D K
Sbjct: 64 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKLLQYT 121
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHR++ + N+L++ K+GDFG+ K+ K Y
Sbjct: 122 SQICKGMEYLGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQD--KEYYKVKEP 177
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 178 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHR++ + N+L++ K+GDFG+ K+ K Y G
Sbjct: 124 ICKGMEYLGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQD--KEYYKVKEPGE 179
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGV 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 LDSN--------------KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
++ + S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNIDXX-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXX-KKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 92 AFTFCDLERATDGFNRK-PYPRR----GNKLGEGQFGTVY------YGKLKNGMEIAVKT 140
++TF D + +N K +PR G LG G FG V GK +++AVK
Sbjct: 11 SYTFIDPTQLP--YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 68
Query: 141 LEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNNIMNCIVY-EY 198
L+ EA M +E++ +S +H N++ LLG C + +V EY
Sbjct: 69 LKSTAHADE-----KEALM-------SELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116
Query: 199 MCNGSLYDRLARV--------------------NNTPPLDSNKRYSIALGVAEALHYLHS 238
C G L + L R + PL+ + VA+ + +L S
Sbjct: 117 CCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS 176
Query: 239 LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH 298
K IHRDV + NVLL V K+GDFG+ + ++ + N +M PE++
Sbjct: 177 --KNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAPESIF 233
Query: 299 -CQISTKTDVFSYGVILLELLT-GMKP 323
C + ++DV+SYG++L E+ + G+ P
Sbjct: 234 DCVYTVQSDVWSYGILLWEIFSLGLNP 260
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSE 508
PL+ + VA+ + +L S K IHRDV + NVLL V K+GDFG+ + M++
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLAS--KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 509 TSNVKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYG 546
++ + N +M PE++ C + ++DV+SYG
Sbjct: 212 SNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 247
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ Y G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ EY G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNIDXX-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXX-KKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 40/224 (17%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 70
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARVN-------NTPPLDS 219
+ C HV +RLLG+ + +V E M +G L L + PP
Sbjct: 71 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 128
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+ +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + + ET
Sbjct: 129 QEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD--- 183
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
Y + G P +M PE++ + +T +D++S+GV+L E+ +
Sbjct: 184 -YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSE 508
PP + +A +A+ + YL++ K +HRD+ + N ++ +F K+GDFG+ + + E
Sbjct: 124 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 509 TSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
T Y + G P +M PE++ + +T +D++S+G
Sbjct: 182 TD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G E AVK + E+ + EVQ L Q
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLL-------REVQLLKQL 89
Query: 176 KHVNLLRLLGLCNNI-MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V E G L+D + +D+ + I V +
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 146
Query: 235 YLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
Y+H I+HRD+K N+LL D N ++ DFG+ E S K M ++ GT
Sbjct: 147 YMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEAS--KKM--KDKIGTA 198
Query: 290 PYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE +H K DV+S GVIL LL+G P + N
Sbjct: 199 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 454 SNKRYS------IALGVAEALHYLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFG 502
S KR+S I V + Y+H I+HRD+K N+LL D N ++ DFG
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFG 180
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGA 547
+ E S K M ++ GT Y+ PE +H K DV+S G
Sbjct: 181 LSTHFEAS--KKM--KDKIGTAYYIAPEVLHGTYDEKCDVWSTGV 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCN-----NIMNCIVYEYMCNGSLYDRLARVNNTPPL 217
L F E Q + H ++ + + IV EY+ +L D V+ P+
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPM 113
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
+ + +AL++ H IIHRDVK AN+++ K+ DFGI + S
Sbjct: 114 TPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 278 KTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYL 335
T + GT Y+ PE A + ++DV+S G +L E+LTG P ++ + + Y
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 336 VVEQEVP 342
V E +P
Sbjct: 232 VREDPIP 238
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 446 VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 505
V+ P+ + + +AL++ H IIHRDVK AN+++ K+ DFGI +
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 506 MSETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
S T + GT Y+ PE A + ++DV+S G
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG+V Y L++ G +AVK L+ TE + FE E+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREI 65
Query: 170 QTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ L +H N+++ G+C + ++ EY+ GSL D L + +D K
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKLLQYT 123
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E
Sbjct: 124 SQICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--P 179
Query: 287 GTRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
G P Y P + S +DV+S+GV+L EL T
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 126 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 181
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGV 208
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 47/240 (19%)
Query: 110 YPRR----GNKLGEGQFGTVYYG--------KLKNGMEIAVKTLEXXXXXXXXXXXXTEA 157
+PR G LGEG FG V K K + +AVK L+ +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 158 AMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPP 216
M+ ++ KH N++ LLG C ++ Y G+L + L R P
Sbjct: 92 EMMKMI-----------GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL-RARRPPG 139
Query: 217 L----DSNK----------RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ D N+ S +A + YL S + IHRD+ + NVL+ EN V K
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENNVMK 197
Query: 263 LGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT 319
+ DFG+ + + +N+ Y + G P +M PEA+ ++ T ++DV+S+GV++ E+ T
Sbjct: 198 IADFGLAR--DINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S + IHRD+ + NVL+ EN V K+ DFG+ + + +N+ Y + G
Sbjct: 166 LARGMEYLAS--QKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNID-YYKKTTNGR 220
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PEA+ ++ T ++DV+S+G
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 86
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD--ETCTRFYTA-EIVS 143
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K + GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQY 200
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + ++K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K + GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGT 197
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + ++K +D+++ G I
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCII 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 60/315 (19%)
Query: 110 YPRR----GNKLGEGQFGTVY----YGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR G LG G FG V YG +K+ M +AVK L+ EA M
Sbjct: 36 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-----EALM 90
Query: 160 IPILLFENEVQTLSQC-KHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLAR------V 211
+E++ LS H+N++ LLG C ++ EY C G L + L R
Sbjct: 91 -------SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 143
Query: 212 NNTPP---------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ T P LD S + VA+ + +L S K IHRD+ + N+LL + K
Sbjct: 144 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITK 201
Query: 263 LGDFGIVK-MSETSNMKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYGVILLELL 318
+ DFG+ + + SN Y P +M PE++ +C + ++DV+SYG+ L EL
Sbjct: 202 ICDFGLARDIKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
Query: 319 T-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDK 377
+ G P +Y ++++ +L E H + + + C + K
Sbjct: 258 SLGSSPYPGMPVDSKFYKMIKEGF---RMLSPE-------HAPAEMYDIMKTCWDADPLK 307
Query: 378 RASMRDIVDLLSKSM 392
R + + IV L+ K +
Sbjct: 308 RPTFKQIVQLIEKQI 322
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYT 517
S + VA+ + +L S K IHRD+ + N+LL + K+ DFG+ + + SN Y
Sbjct: 165 SFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN----YV 218
Query: 518 ENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P +M PE++ +C + ++DV+SYG
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYG 250
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLGEG +G+VY K G +A+K + E+ + I+ E+ + Q
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVP------------VESDLQEII---KEISIMQQ 80
Query: 175 CKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
C ++++ G N IV EY GS+ D + N T L ++ +I + L
Sbjct: 81 CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
YLH + K IHRD+K+ N+LL+ KL DFG+ K + GT +M
Sbjct: 139 EYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK---RNXVIGTPFWMA 193
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 336
PE + + D++S G+ +E+ G P D + + +++
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ L YLH + K IHRD+K+ N+LL+ KL DFG+ K + GT
Sbjct: 136 KGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK---RNXVIGTPF 190
Query: 526 YMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYS 567
+M PE + + D++S G IT +++A+ + Y+
Sbjct: 191 WMAPEVIQEIGYNCVADIWSLG-------ITAIEMAEGKPPYA 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 60/315 (19%)
Query: 110 YPRR----GNKLGEGQFGTVY----YGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR G LG G FG V YG +K+ M +AVK L+ EA M
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-----EALM 97
Query: 160 IPILLFENEVQTLSQC-KHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLAR------V 211
+E++ LS H+N++ LLG C ++ EY C G L + L R
Sbjct: 98 -------SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 150
Query: 212 NNTPP---------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ T P LD S + VA+ + +L S K IHRD+ + N+LL + K
Sbjct: 151 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITK 208
Query: 263 LGDFGIVK-MSETSNMKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYGVILLELL 318
+ DFG+ + + SN Y P +M PE++ +C + ++DV+SYG+ L EL
Sbjct: 209 ICDFGLARHIKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 319 T-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDK 377
+ G P +Y ++++ +L E H + + + C + K
Sbjct: 265 SLGSSPYPGMPVDSKFYKMIKEGF---RMLSPE-------HAPAEMYDIMKTCWDADPLK 314
Query: 378 RASMRDIVDLLSKSM 392
R + + IV L+ K +
Sbjct: 315 RPTFKQIVQLIEKQI 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYT 517
S + VA+ + +L S K IHRD+ + N+LL + K+ DFG+ + + SN Y
Sbjct: 172 SFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN----YV 225
Query: 518 ENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P +M PE++ +C + ++DV+SYG
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G E AVK + LL EVQ L Q
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--------LL--REVQLLKQL 83
Query: 176 KHVNLLRLLGLCNNI-MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V E G L+D + +D+ + I V +
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 140
Query: 235 YLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
Y+H I+HRD+K N+LL D N ++ DFG+ E S K M ++ GT
Sbjct: 141 YMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEAS--KKM--KDKIGTA 192
Query: 290 PYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE +H K DV+S GVIL LL+G P + N
Sbjct: 193 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 454 SNKRYS------IALGVAEALHYLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFG 502
S KR+S I V + Y+H I+HRD+K N+LL D N ++ DFG
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFG 174
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ E S K M ++ GT Y+ PE +H K DV+S G
Sbjct: 175 LSTHFEAS--KKM--KDKIGTAYYIAPEVLHGTYDEKCDVWSTG 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 60/315 (19%)
Query: 110 YPRR----GNKLGEGQFGTVY----YGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR G LG G FG V YG +K+ M +AVK L+ EA M
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-----EALM 97
Query: 160 IPILLFENEVQTLSQC-KHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLAR------V 211
+E++ LS H+N++ LLG C ++ EY C G L + L R
Sbjct: 98 -------SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 150
Query: 212 NNTPP---------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ T P LD S + VA+ + +L S K IHRD+ + N+LL + K
Sbjct: 151 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITK 208
Query: 263 LGDFGIVK-MSETSNMKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYGVILLELL 318
+ DFG+ + + SN Y P +M PE++ +C + ++DV+SYG+ L EL
Sbjct: 209 ICDFGLARDIKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 319 T-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDK 377
+ G P +Y ++++ +L E H + + + C + K
Sbjct: 265 SLGSSPYPGMPVDSKFYKMIKEGF---RMLSPE-------HAPAEMYDIMKTCWDADPLK 314
Query: 378 RASMRDIVDLLSKSM 392
R + + IV L+ K +
Sbjct: 315 RPTFKQIVQLIEKQI 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYT 517
S + VA+ + +L S K IHRD+ + N+LL + K+ DFG+ + + SN Y
Sbjct: 172 SFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN----YV 225
Query: 518 ENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P +M PE++ +C + ++DV+SYG
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 60/315 (19%)
Query: 110 YPRR----GNKLGEGQFGTVY----YGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR G LG G FG V YG +K+ M +AVK L+ EA M
Sbjct: 38 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-----EALM 92
Query: 160 IPILLFENEVQTLSQC-KHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLAR------V 211
+E++ LS H+N++ LLG C ++ EY C G L + L R
Sbjct: 93 -------SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 145
Query: 212 NNTPP---------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ T P LD S + VA+ + +L S K IHRD+ + N+LL + K
Sbjct: 146 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITK 203
Query: 263 LGDFGIVK-MSETSNMKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYGVILLELL 318
+ DFG+ + + SN Y P +M PE++ +C + ++DV+SYG+ L EL
Sbjct: 204 ICDFGLARDIKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
Query: 319 T-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDK 377
+ G P +Y ++++ +L E H + + + C + K
Sbjct: 260 SLGSSPYPGMPVDSKFYKMIKEGF---RMLSPE-------HAPAEMYDIMKTCWDADPLK 309
Query: 378 RASMRDIVDLLSKSM 392
R + + IV L+ K +
Sbjct: 310 RPTFKQIVQLIEKQI 324
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYT 517
S + VA+ + +L S K IHRD+ + N+LL + K+ DFG+ + + SN Y
Sbjct: 167 SFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN----YV 220
Query: 518 ENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P +M PE++ +C + ++DV+SYG
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYG 252
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 27/243 (11%)
Query: 109 PYPRR--------GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAM 159
P PR+ G LGEG F TV + L E A+K LE +
Sbjct: 2 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENK 53
Query: 160 IPILLFENEVQTLSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLD 218
+P + E +V +S+ H ++L ++ Y NG L + ++ + +
Sbjct: 54 VPYVTRERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--E 109
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 278
+ R+ A + AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K
Sbjct: 110 TCTRFYTA-EIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESK 165
Query: 279 TMYTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 337
GT Y+ PE + + + K +D+++ G I+ +L+ G+ P N L + ++
Sbjct: 166 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 225
Query: 338 EQE 340
+ E
Sbjct: 226 KLE 228
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 119 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 175
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCII 202
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 27/243 (11%)
Query: 109 PYPRR--------GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAM 159
P PR+ G LGEG F TV + L E A+K LE +
Sbjct: 1 PQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENK 52
Query: 160 IPILLFENEVQTLSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLD 218
+P + E +V +S+ H ++L ++ Y NG L + ++ + +
Sbjct: 53 VPYVTRERDV--MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--E 108
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 278
+ R+ A + AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K
Sbjct: 109 TCTRFYTA-EIVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESK 164
Query: 279 TMYTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 337
GT Y+ PE + + + K +D+++ G I+ +L+ G+ P N L + ++
Sbjct: 165 QARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 224
Query: 338 EQE 340
+ E
Sbjct: 225 KLE 227
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 118 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 174
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCII 201
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G E AVK + LL EVQ L Q
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--------LL--REVQLLKQL 106
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V E G L+D + +D+ + I V +
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 163
Query: 235 YLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
Y+H I+HRD+K N+LL D N ++ DFG+ E S K M ++ GT
Sbjct: 164 YMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEAS--KKM--KDKIGTA 215
Query: 290 PYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE +H K DV+S GVIL LL+G P + N
Sbjct: 216 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 454 SNKRYS------IALGVAEALHYLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFG 502
S KR+S I V + Y+H I+HRD+K N+LL D N ++ DFG
Sbjct: 142 SRKRFSEVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFG 197
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ E S K M ++ GT Y+ PE +H K DV+S G
Sbjct: 198 LSTHFEAS--KKM--KDKIGTAYYIAPEVLHGTYDEKCDVWSTG 237
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 112 RRGNKLGEGQFGTVYYG-KLKNG----MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
+R LG G FGTVY G + G + +A+K L F
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE------------FM 88
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+E ++ H +L+RLLG+C + +V + M +G L + + + + S +
Sbjct: 89 DEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWC 146
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ +A+ + YL + ++HRD+ + NVL+ K+ DFG+ ++ E + Y +
Sbjct: 147 VQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--YNAD-G 201
Query: 287 GTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVP 342
G P +M E +H + T ++DV+SYGV + EL+T G KP D +P
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG--------------IP 247
Query: 343 VREVLD-KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
RE+ D E GE + + T+ + +V KC + + D R +++ S+
Sbjct: 248 TREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 298
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ + YL + ++HRD+ + NVL+ K+ DFG+ ++ E + Y + G
Sbjct: 149 IAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--YNAD-GGK 203
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYGAQI 549
P +M E +H + T ++DV+SYG I
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTI 232
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 60/315 (19%)
Query: 110 YPRR----GNKLGEGQFGTVY----YGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR G LG G FG V YG +K+ M +AVK L+ EA M
Sbjct: 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-----EALM 74
Query: 160 IPILLFENEVQTLSQC-KHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLAR------V 211
+E++ LS H+N++ LLG C ++ EY C G L + L R
Sbjct: 75 -------SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127
Query: 212 NNTPP---------LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 262
+ T P LD S + VA+ + +L S K IHRD+ + N+LL + K
Sbjct: 128 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITK 185
Query: 263 LGDFGIVK-MSETSNMKTMYTENLTGTRP--YMPPEAM-HCQISTKTDVFSYGVILLELL 318
+ DFG+ + + SN Y P +M PE++ +C + ++DV+SYG+ L EL
Sbjct: 186 ICDFGLARDIKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 319 T-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDK 377
+ G P +Y ++++ +L E H + + + C + K
Sbjct: 242 SLGSSPYPGMPVDSKFYKMIKEGF---RMLSPE-------HAPAEMYDIMKTCWDADPLK 291
Query: 378 RASMRDIVDLLSKSM 392
R + + IV L+ K +
Sbjct: 292 RPTFKQIVQLIEKQI 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYT 517
S + VA+ + +L S K IHRD+ + N+LL + K+ DFG+ + + SN Y
Sbjct: 149 SFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN----YV 202
Query: 518 ENLTGTRP--YMPPEAM-HCQISTKTDVFSYG 546
P +M PE++ +C + ++DV+SYG
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYG 234
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
++ +++ G L+ RL++ + + ++ +A +A AL +LHSL II+RD+K N+
Sbjct: 104 LILDFLRGGDLFTRLSK--EVMFTEEDVKFYLA-ELALALDHLHSLG--IIYRDLKPENI 158
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGV 312
LLDE KL DFG+ K S + K Y+ GT YM PE ++ + T++ D +S+GV
Sbjct: 159 LLDEEGHIKLTDFGLSKES-IDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGV 215
Query: 313 ILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
++ E+LTG P + ++++ ++ + + L EA
Sbjct: 216 LMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA 254
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A AL +LHSL II+RD+K N+LLDE KL DFG+ K S + K Y+ GT
Sbjct: 136 LALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES-IDHEKKAYS--FCGT 190
Query: 524 RPYMPPEAMHCQISTKT-DVFSYG 546
YM PE ++ + T++ D +S+G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFG 214
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 112 RRGNKLGEGQFGTVYYG-KLKNG----MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
+R LG G FGTVY G + G + +A+K L F
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE------------FM 65
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+E ++ H +L+RLLG+C + +V + M +G L + + + + S +
Sbjct: 66 DEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWC 123
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ +A+ + YL + ++HRD+ + NVL+ K+ DFG+ ++ E + Y +
Sbjct: 124 VQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--YNAD-G 178
Query: 287 GTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVP 342
G P +M E +H + T ++DV+SYGV + EL+T G KP D +P
Sbjct: 179 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG--------------IP 224
Query: 343 VREVLD-KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
RE+ D E GE + + T+ + +V KC + + D R +++ S+
Sbjct: 225 TREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 275
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ + YL + ++HRD+ + NVL+ K+ DFG+ ++ E + Y + G
Sbjct: 126 IAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--YNAD-GGK 180
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYGAQI 549
P +M E +H + T ++DV+SYG I
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTI 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIP--ILLFENEVQ 170
G LG G V+ + L+ ++AVK L + A P L F E Q
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLR------------ADLARDPSFYLRFRREAQ 64
Query: 171 TLSQCKHVNLLRLLGLCN-----NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
+ H ++ + + IV EY+ +L D V+ P+ + +
Sbjct: 65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPMTPKRAIEV 121
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
+AL++ H IIHRDVK AN+++ K+ DFGI + S T +
Sbjct: 122 IADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 286 TGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVEQEVP 342
GT Y+ PE A + ++DV+S G +L E+LTG P ++ + + Y V E +P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 446 VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 505
V+ P+ + + +AL++ H IIHRDVK AN+++ K+ DFGI +
Sbjct: 107 VHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 506 MSETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
S T + GT Y+ PE A + ++DV+S G
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G E AVK + LL EVQ L Q
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--------LL--REVQLLKQL 107
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V E G L+D + +D+ + I V +
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 164
Query: 235 YLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
Y+H I+HRD+K N+LL D N ++ DFG+ E S K M ++ GT
Sbjct: 165 YMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEAS--KKM--KDKIGTA 216
Query: 290 PYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE +H K DV+S GVIL LL+G P + N
Sbjct: 217 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 454 SNKRYS------IALGVAEALHYLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFG 502
S KR+S I V + Y+H I+HRD+K N+LL D N ++ DFG
Sbjct: 143 SRKRFSEVDAARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFG 198
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ E S K M ++ GT Y+ PE +H K DV+S G
Sbjct: 199 LSTHFEAS--KKM--KDKIGTAYYIAPEVLHGTYDEKCDVWSTG 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 87
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 144
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K + GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQY 201
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 251
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K + GT
Sbjct: 142 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGT 198
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCII 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
++ +++ G L+ RL++ + + ++ +A +A AL +LHSL II+RD+K N+
Sbjct: 103 LILDFLRGGDLFTRLSK--EVMFTEEDVKFYLA-ELALALDHLHSLG--IIYRDLKPENI 157
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGV 312
LLDE KL DFG+ K S + K Y+ GT YM PE ++ + T++ D +S+GV
Sbjct: 158 LLDEEGHIKLTDFGLSKES-IDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGV 214
Query: 313 ILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
++ E+LTG P + ++++ ++ + + L EA
Sbjct: 215 LMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA 253
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A AL +LHSL II+RD+K N+LLDE KL DFG+ K S + K Y+ GT
Sbjct: 135 LALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES-IDHEKKAYS--FCGT 189
Query: 524 RPYMPPEAMHCQISTKT-DVFSYG 546
YM PE ++ + T++ D +S+G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFG 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 91
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVY--EYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
S+ H ++L C + + Y NG L + ++ + ++ R+ A +
Sbjct: 92 SRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIV 147
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 204
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
Y+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 255
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 146 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 202
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCII 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 92/160 (57%), Gaps = 11/160 (6%)
Query: 194 IVYEYMCNGSLYDRLAR-VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
++ +++ G L+ RL++ V T + + ++ +A +A AL +LHSL II+RD+K N
Sbjct: 103 LILDFLRGGDLFTRLSKEVMFT---EEDVKFYLA-ELALALDHLHSLG--IIYRDLKPEN 156
Query: 253 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYG 311
+LLDE KL DFG+ K S + K Y+ GT YM PE ++ + T++ D +S+G
Sbjct: 157 ILLDEEGHIKLTDFGLSKES-IDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFG 213
Query: 312 VILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
V++ E+LTG P + ++++ ++ + + L EA
Sbjct: 214 VLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA 253
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A AL +LHSL II+RD+K N+LLDE KL DFG+ K S + K Y+ GT
Sbjct: 135 LALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES-IDHEKKAYS--FCGT 189
Query: 524 RPYMPPEAMHCQISTKT-DVFSYG 546
YM PE ++ + T++ D +S+G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFG 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 73 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 117
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 118 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 174
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 118 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 174
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 175 ELLKRREFHAEPVDVWSCG 193
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 38/276 (13%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V + K +G ++AVK ++ LLF NEV +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE------------LLF-NEVVIMRD 98
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + ++ E++ G+L D +++V L+ + ++ V +A
Sbjct: 99 YQHFNVVEMYKSYLVGEEL-WVLMEFLQGGALTDIVSQVR----LNEEQIATVCEAVLQA 153
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLH+ + +IHRD+KS ++LL + KL DFG K + L GT +M
Sbjct: 154 LAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKXLVGTPYWM 208
Query: 293 PPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + + +T+ D++S G++++E++ G P ++ + ++ + D
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----------QAMKRLRDSPP 258
Query: 352 GEWNETH-VETLIGIVFEKCCVFEKDKRASMRDIVD 386
+ +H V ++ E+ V + +RA+ ++++D
Sbjct: 259 PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L+ + ++ V +AL YLH+ + +IHRD+KS ++LL + KL DFG
Sbjct: 138 LNEEQIATVCEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQI 549
K + L GT +M PE + + +T+ D++S G +
Sbjct: 196 PK---RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCN-----NIMNCIVYEYMCNGSLYDRLARVNNTPPL 217
L F E Q + H ++ + + IV EY+ +L D V+ P+
Sbjct: 74 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI---VHTEGPM 130
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
+ + +AL++ H IIHRDVK AN+++ K+ DFGI + S
Sbjct: 131 TPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 278 KTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYL 335
T + GT Y+ PE A + ++DV+S G +L E+LTG P ++ + + Y
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 248
Query: 336 VVEQEVP 342
V E +P
Sbjct: 249 VREDPIP 255
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 446 VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 505
V+ P+ + + +AL++ H IIHRDVK AN+++ K+ DFGI +
Sbjct: 124 VHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMISATNAVKVMDFGIAR 181
Query: 506 MSETSNVKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYG 546
S T + GT Y+ PE A + ++DV+S G
Sbjct: 182 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K+ G+E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE-------IEREVSIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L + N + + + E + G L+D LA+ + L + S + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
++YLH+ K I H D+K N++L + +P KL DFG+ E + +N+ G
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + ++YLH+ K I H D+K N++L + +P KL DFG+ E + +N
Sbjct: 124 ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 62
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 176
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 226
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 117 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 173
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCII 200
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 83
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 140
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K + GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGTAQY 197
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 247
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K + GT
Sbjct: 138 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANSFVGT 194
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCII 221
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K+ G+E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE-------IEREVSIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L + N + + + E + G L+D LA+ + L + S + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
++YLH+ K I H D+K N++L + +P KL DFG+ E + +N+ G
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + ++YLH+ K I H D+K N++L + +P KL DFG+ E + +N
Sbjct: 124 ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 61
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 118
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 175
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 225
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 116 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 172
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCII 199
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 68
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 69 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 125
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 126 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 182
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 232
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 123 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 179
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCII 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K+ G+E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE-------IEREVSIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L + N + + + E + G L+D LA+ + L + S + +
Sbjct: 70 RQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
++YLH+ K I H D+K N++L + +P KL DFG+ E + +N+ G
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + ++YLH+ K I H D+K N++L + +P KL DFG+ E + +N
Sbjct: 124 ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K+ G+E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE-------IEREVSIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L + N + + + E + G L+D LA+ + L + S + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
++YLH+ K I H D+K N++L + +P KL DFG+ E + +N+ G
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + ++YLH+ K I H D+K N++L + +P KL DFG+ E + +N
Sbjct: 124 ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K+ G+E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE-------IEREVSIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L + N + + + E + G L+D LA+ + L + S + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
++YLH+ K I H D+K N++L + +P KL DFG+ E + +N+ G
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + ++YLH+ K I H D+K N++L + +P KL DFG+ E + +N
Sbjct: 124 ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG +G V + E +AVK ++ E + +L EN V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 75 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 176
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 177 ELLKRREFHAEPVDVWSCG 195
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 14/180 (7%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
ENE+ L + KH N++ L + + + ++ + + G L+DR+ D+++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--- 120
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNMKTMY 281
+ V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + ++ +
Sbjct: 121 LIFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS-- 176
Query: 282 TENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
GT Y+ PE + + +K D +S GVI LL G P D N + +++ E
Sbjct: 177 --TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + +V +
Sbjct: 125 VLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS----TA 178
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + +K D +S G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIG 205
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 40/222 (18%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 72
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 73 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+ +A +A+ + YL++ K +HR++ + N ++ +F K+GDFG+ + + ET
Sbjct: 131 QEMIQMAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD--- 185
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLEL 317
Y + G P +M PE++ + +T +D++S+GV+L E+
Sbjct: 186 -YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSE 508
PP + +A +A+ + YL++ K +HR++ + N ++ +F K+GDFG+ + + E
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 509 TSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
T Y + G P +M PE++ + +T +D++S+G
Sbjct: 184 TD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 220
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 40/222 (18%)
Query: 116 KLGEGQFGTVYYGKLKNGME------IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
+LG+G FG VY G ++ ++ +AVKT+ A++ + F NE
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES------------ASLRERIEFLNEA 71
Query: 170 QTLS--QCKHVNLLRLLGLCNNIM-NCIVYEYMCNGSLYDRLARV-----NNT--PPLDS 219
+ C HV +RLLG+ + +V E M +G L L + NN PP
Sbjct: 72 SVMKGFTCHHV--VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
+ +A +A+ + YL++ K +HR++ + N ++ +F K+GDFG+ + + ET
Sbjct: 130 QEMIQMAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD--- 184
Query: 279 TMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVILLEL 317
Y + G P +M PE++ + +T +D++S+GV+L E+
Sbjct: 185 -YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSE 508
PP + +A +A+ + YL++ K +HR++ + N ++ +F K+GDFG+ + + E
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 509 TSNVKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
T Y + G P +M PE++ + +T +D++S+G
Sbjct: 183 TD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 114 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G +LG GQF V + K+ G+E A K ++ E E EV L
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE-------IEREVSIL 69
Query: 173 SQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
Q H N++ L + N + + + E + G L+D LA+ + L + S + +
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILD 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKTMYTENLTG 287
++YLH+ K I H D+K N++L + +P KL DFG+ E + +N+ G
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKNIFG 180
Query: 288 TRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
T ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ + ++YLH+ K I H D+K N++L + +P KL DFG+ E + +N
Sbjct: 124 ILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG----VEFKN 177
Query: 520 LTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
+ GT ++ PE ++ + + + D++S G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V++ M G L+D L L + SI + EA+ +LH+ I+HRD+K N+
Sbjct: 177 LVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEAVSFLHA--NNIVHRDLKPENI 231
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-------STKTD 306
LLD+N +L DFG E L GT Y+ PE + C + + D
Sbjct: 232 LLDDNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 307 VFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+++ GVIL LL G P IL +++E
Sbjct: 288 LWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L + SI + EA+ +LH+ I+HRD+K N+LLD+N +L DFG E
Sbjct: 197 LSEKETRSIMRSLLEAVSFLHA--NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE 254
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGAQIKTQHITNVDIADRER 564
L GT Y+ PE + C + + D+++ G + T + R +
Sbjct: 255 ----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310
Query: 565 YYSLQTMLPGHHE 577
L+ ++ G ++
Sbjct: 311 ILMLRMIMEGQYQ 323
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 86
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 143
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 200
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 197
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 84
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 141
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 198
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 139 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 195
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 14/180 (7%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
ENE+ L + KH N++ L + + + ++ + + G L+DR+ D+++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--- 120
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNMKTMY 281
+ V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + ++ +
Sbjct: 121 LIFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS-- 176
Query: 282 TENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
GT Y+ PE + + +K D +S GVI LL G P D N + +++ E
Sbjct: 177 --TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + +V +
Sbjct: 125 VLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS----TA 178
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + +K D +S G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIG 205
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 86
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 143
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 200
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 197
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 84
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 141
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 198
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 139 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 195
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 84
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 141
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANAFVGTAQY 198
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 139 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANAFVGT 195
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 14/180 (7%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
ENE+ L + KH N++ L + + + ++ + + G L+DR+ D+++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--- 120
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNMKTMY 281
+ V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + ++ +
Sbjct: 121 LIFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS-- 176
Query: 282 TENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
GT Y+ PE + + +K D +S GVI LL G P D N + +++ E
Sbjct: 177 --TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + +V +
Sbjct: 125 VLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS----TA 178
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + +K D +S G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIG 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 87
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 144
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 201
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 251
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 142 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 198
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCII 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AVK ++ T+ + EV+ +
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDK-----------TQLNPTSLQKLFREVRIMKIL 71
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 128
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G+ PY P
Sbjct: 129 YCHQ--KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK----LDTFCGSPPYAAP 182
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G+
Sbjct: 123 IVSAVQYCHQ--KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN----KLDTFCGS 176
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 83
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 140
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 197
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 247
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 138 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 194
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCII 221
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 86
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 143
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 200
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 197
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 89
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 90 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 146
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 147 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 203
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 253
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 144 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-KQARANXFVGT 200
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCII 227
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 14/180 (7%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
ENE+ L + KH N++ L + + + ++ + + G L+DR+ D+++
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--- 120
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNMKTMY 281
+ V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + ++ +
Sbjct: 121 LIFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS-- 176
Query: 282 TENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
GT Y+ PE + + +K D +S GVI LL G P D N + +++ E
Sbjct: 177 --TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVL---LDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V +A+ YLH L I+HRD+K N+L LDE+ + DFG+ KM + +V +
Sbjct: 125 VLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS----TA 178
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + +K D +S G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIG 205
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V+ GK + G E+AVK E E+ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERS--------------WFREAEIYQTVMLR 55
Query: 177 HVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N +V +Y +GSL+D L R T +AL A
Sbjct: 56 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTAS 111
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++ + +
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 285 LTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYL 335
GT+ YM PE + H + + D+++ G++ E+ + I ++ + YY L
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231
Query: 336 V 336
V
Sbjct: 232 V 232
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNV 512
+AL A L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 164
Query: 513 KTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
+ + GT+ YM PE + H + + D+++ G
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 205
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V+ GK + G E+AVK E E+ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERS--------------WFREAEIYQTVMLR 56
Query: 177 HVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N +V +Y +GSL+D L R T +AL A
Sbjct: 57 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTAS 112
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++ + +
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 285 LTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYL 335
GT+ YM PE + H + + D+++ G++ E+ + I ++ + YY L
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 232
Query: 336 V 336
V
Sbjct: 233 V 233
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNV 512
+AL A L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++
Sbjct: 106 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 165
Query: 513 KTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
+ + GT+ YM PE + H + + D+++ G
Sbjct: 166 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 115 NKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPIL--LFENEVQT 171
K+GEG +G V+ + ++ G +A+K E+ P++ + E++
Sbjct: 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKF-------------LESEDDPVIKKIALREIRM 55
Query: 172 LSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L Q KH NL+ LL + +V+EY C+ ++ L R P K SI
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEY-CDHTVLHELDRYQRGVPEHLVK--SITWQTL 112
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
+A+++ H + IHRDVK N+L+ ++ V KL DFG ++ + Y ++ TR
Sbjct: 113 QAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP---SDYYDDEVATRW 167
Query: 291 YMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 336
Y PE + Q DV++ G + ELL+G+ + + YL+
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
SI +A+++ H + IHRDVK N+L+ ++ V KL DFG ++ + Y +
Sbjct: 106 SITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP---SDYYD 160
Query: 519 NLTGTRPYMPPEAM--HCQISTKTDVFSYGA 547
+ TR Y PE + Q DV++ G
Sbjct: 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGC 191
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V+ GK + G E+AVK E E+ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERS--------------WFREAEIYQTVMLR 94
Query: 177 HVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N +V +Y +GSL+D L R T +AL A
Sbjct: 95 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTAS 150
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++ + +
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 285 LTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYL 335
GT+ YM PE + H + + D+++ G++ E+ + I ++ + YY L
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270
Query: 336 V 336
V
Sbjct: 271 V 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNV 512
+AL A L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203
Query: 513 KTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
+ + GT+ YM PE + H + + D+++ G
Sbjct: 204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 194 IVYEYMCNGSLYDRLAR-VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
++ +++ G L+ RL++ V T + + ++ +A +A L +LHSL II+RD+K N
Sbjct: 107 LILDFLRGGDLFTRLSKEVMFT---EEDVKFYLA-ELALGLDHLHSLG--IIYRDLKPEN 160
Query: 253 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 311
+LLDE KL DFG+ K + + K Y+ GT YM PE ++ Q S D +SYG
Sbjct: 161 ILLDEEGHIKLTDFGLSKEA-IDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYG 217
Query: 312 VILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
V++ E+LTG P + L+++ ++ + + L EA
Sbjct: 218 VLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEA 257
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A L +LHSL II+RD+K N+LLDE KL DFG+ K + + K Y+ GT
Sbjct: 139 LALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKAYS--FCGT 193
Query: 524 RPYMPPEAMHCQI-STKTDVFSYG 546
YM PE ++ Q S D +SYG
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYG 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V+ GK + G E+AVK E E+ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERS--------------WFREAEIYQTVMLR 58
Query: 177 HVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N +V +Y +GSL+D L R T +AL A
Sbjct: 59 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTAS 114
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++ + +
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 285 LTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYL 335
GT+ YM PE + H + + D+++ G++ E+ + I ++ + YY L
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 234
Query: 336 V 336
V
Sbjct: 235 V 235
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNV 512
+AL A L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++
Sbjct: 108 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 167
Query: 513 KTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
+ + GT+ YM PE + H + + D+++ G
Sbjct: 168 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 208
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 39/289 (13%)
Query: 114 GNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
G +G+G+FG VY+G+ E+A++ ++ + F+ EV
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQ-----------LKAFKREVMAYR 84
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
Q +H N++ +G C + + + +C G + R + LD NK IA + + +
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQEIVKGM 143
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET--SNMKTMYTENLTGTRPY 291
YLH +K I+H+D+KS NV D V + DFG+ +S + + G +
Sbjct: 144 GYLH--AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
Query: 292 MPPEAMH----------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
+ PE + S +DVF+ G I EL P E
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA----------EA 250
Query: 342 PVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLLSK 390
+ ++ ++ + I + C FE+++R + ++D+L K
Sbjct: 251 IIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 507
LD NK IA + + + YLH+ K I+H+D+KS NV D V + DFG+ +S
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHA--KGILHKDLKSKNVFYDNGKVV-ITDFGLFSIS 179
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AVK ++ LF EV+ +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK----------LFR-EVRIMKVL 70
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G+ PY P
Sbjct: 128 YCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G+
Sbjct: 122 IVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGS 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 116 KLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
+LG+G FG+V Y L++ G +AVK L+ TE + FE E++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----------TEEHLRD---FEREIE 66
Query: 171 TLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
L +H N+++ G+C + ++ E++ GSL + L + + +D K
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKERIDHIKLLQYTS 124
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG 287
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 125 QICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PG 180
Query: 288 TRP---YMPPEAMHCQISTKTDVFSYGVILLELLT 319
P Y P + S +DV+S+GV+L EL T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + YL + K IHRD+ + N+L++ K+GDFG+ K+ E G
Sbjct: 126 ICKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE--PGE 181
Query: 524 RP---YMPPEAMHCQISTKTDVFSYGA 547
P Y P + S +DV+S+G
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGV 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AVK ++ LF EV+ +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK----------LF-REVRIMKVL 70
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G+ PY P
Sbjct: 128 YCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G+
Sbjct: 122 IVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGS 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V+ GK + G E+AVK E E+ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERS--------------WFREAEIYQTVMLR 61
Query: 177 HVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N +V +Y +GSL+D L R T +AL A
Sbjct: 62 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTAS 117
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++ + +
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 285 LTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLELL--TGMKPIDDNNTILYYYL 335
GT+ YM PE + H + + D+++ G++ E+ + I ++ + YY L
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 237
Query: 336 V 336
V
Sbjct: 238 V 238
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNV 512
+AL A L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++
Sbjct: 111 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 170
Query: 513 KTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
+ + GT+ YM PE + H + + D+++ G
Sbjct: 171 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 211
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 21/238 (8%)
Query: 100 RATDGFNRKPYPRRGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAA 158
R G+N R K+G GQF VY L +G+ +A+K ++ A
Sbjct: 23 RPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK----ARAD 78
Query: 159 MIPILLFENEVQTLSQCKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPP 216
I E+ L Q H N+++ + +N +N IV E G L +
Sbjct: 79 CI------KEIDLLKQLNHPNVIKYYASFIEDNELN-IVLELADAGDLSRMIKHFKKQKR 131
Query: 217 LDSNKR-YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 275
L + + + + AL ++HS + ++HRD+K ANV + V KLGD G+ + +
Sbjct: 132 LIPERTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS- 188
Query: 276 NMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPIDDNNTILY 332
KT +L GT YM PE +H + K+D++S G +L E+ P + LY
Sbjct: 189 --KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 244
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL ++HS + ++HRD+K ANV + V KLGD G+ + + KT +L GT
Sbjct: 145 LCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS---KTTAAHSLVGT 199
Query: 524 RPYMPPEAMHCQ-ISTKTDVFSYG 546
YM PE +H + K+D++S G
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLG 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 86
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 143
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 200
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 197
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCII 224
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G+FG V+ GK + G E+AVK E E+ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERS--------------WFREAEIYQTVMLR 81
Query: 177 HVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N +V +Y +GSL+D L R T +AL A
Sbjct: 82 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTAS 137
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++ + +
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 285 LTGTRPYMPPEAM-------HCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYL 335
GT+ YM PE + H + + D+++ G++ E+ + I ++ + YY L
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 257
Query: 336 V 336
V
Sbjct: 258 V 258
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGI-VKMSETSNV 512
+AL A L +LH + KP I HRD+KS N+L+ +N + D G+ V+ ++
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 190
Query: 513 KTMYTENLTGTRPYMPPEAM-------HCQISTKTDVFSYG 546
+ + GT+ YM PE + H + + D+++ G
Sbjct: 191 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G++G V+ G L +G +AVK E E+ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQS--------------WFRETEIYNTVLLR 60
Query: 177 HVNLLRLLGLCNNIMNC-----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + N ++ Y +GSLYD L R P L S A G+A
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAH 120
Query: 232 ALHY--LHSLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKM-SETSNMKTMYTENLTG 287
LH + KP I HRD KS NVL+ N + D G+ M S+ S+ + G
Sbjct: 121 -LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVG 179
Query: 288 TRPYMPPEAMHCQISTK-------TDVFSYGVILLEL 317
T+ YM PE + QI T TD++++G++L E+
Sbjct: 180 TKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 460 IALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKM-SETSNV 512
+A+ A L +LH + KP I HRD KS NVL+ N + D G+ M S+ S+
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDY 169
Query: 513 KTMYTENLTGTRPYMPPEAMHCQISTK-------TDVFSYG---AQIKTQHITNVDIAD- 561
+ GT+ YM PE + QI T TD++++G +I + I N + D
Sbjct: 170 LDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDY 229
Query: 562 RERYYSL 568
R +Y +
Sbjct: 230 RPPFYDV 236
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G E AVK + E+ + EVQ L Q
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVI---SKRQVKQKTDKESLL-------REVQLLKQL 83
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+ +L + +V E G L+D + +D+ + I V +
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGIT 140
Query: 235 YLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
Y H I+HRD+K N+LL D N ++ DFG+ E S ++ GT
Sbjct: 141 YXHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASKK----XKDKIGTA 192
Query: 290 PYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE +H K DV+S GVIL LL+G P + N
Sbjct: 193 YYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 454 SNKRYS------IALGVAEALHYLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFG 502
S KR+S I V + Y H I+HRD+K N+LL D N ++ DFG
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYXHK--NKIVHRDLKPENLLLESKSKDANI--RIIDFG 174
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ E S ++ GT Y+ PE +H K DV+S G
Sbjct: 175 LSTHFEASK----KXKDKIGTAYYIAPEVLHGTYDEKCDVWSTG 214
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F TV + L E A+K LE + +P + E +V +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 86
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 143
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 200
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 141 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 197
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 59
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 116
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 117 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 172
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 173 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 125 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 178
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIG 203
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 116 KLGEGQFGTV---YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+LG G FG+V Y K +++A+K L+ TE M E Q +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD-----TEEMM-------REAQIM 64
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
Q + ++RL+G+C +V E G L+ L P+ + VAE
Sbjct: 65 HQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSN---------VAEL 115
Query: 233 LH-------YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
LH YL K +HRD+ + NVLL K+ DFG+ K + + YT
Sbjct: 116 LHQVSMGMKYLEE--KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD--SYYTARS 171
Query: 286 TGTRP--YMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKP 323
G P + PE ++ + S+++DV+SYGV + E L+ G KP
Sbjct: 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 420 LHYTGIPVIILDTGETKQCQLFKLARVNNTPPLDS---NKRYSIALG-VAEALH------ 469
+H P I+ G + L + + PL KR I + VAE LH
Sbjct: 64 MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 123
Query: 470 -YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP--Y 526
YL K +HRD+ + NVLL K+ DFG+ K + + YT G P +
Sbjct: 124 KYLEE--KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD--SYYTARSAGKWPLKW 179
Query: 527 MPPEAMHC-QISTKTDVFSYG 546
PE ++ + S+++DV+SYG
Sbjct: 180 YAPECINFRKFSSRSDVWSYG 200
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 112 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R+ LG G FGTV+ G + + E ++ + +
Sbjct: 34 RKLKVLGSGVFGTVHKG-------VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 86
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H +++RLLGLC +V +Y+ GSL D + + L + + +A+
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAK 144
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL ++HR++ + NVLL ++ DFG+ + + + +Y+E T + +
Sbjct: 145 GMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK-W 201
Query: 292 MPPEAMH-CQISTKTDVFSYGVILLELLT-GMKP 323
M E++H + + ++DV+SYGV + EL+T G +P
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 452 LDSNKRYSIALG----------VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 501
LD +++ ALG +A+ ++YL ++HR++ + NVLL ++ DF
Sbjct: 120 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADF 177
Query: 502 GIVKMSETSNVKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGAQI 549
G+ + + + +Y+E T + +M E++H + + ++DV+SYG +
Sbjct: 178 GVADLLPPDDKQLLYSEAKTPIK-WMALESIHFGKYTHQSDVWSYGVTV 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 59
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 116
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 117 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 172
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 173 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 125 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 178
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIG 203
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+A+K ++ T+ + EV+ +
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDK-----------TQLNPTSLQKLFREVRIMKIL 68
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + ++ EY G ++D L ++ ++ + A+
Sbjct: 69 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQ 125
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM--YTENLTGTRPYM 292
Y H K I+HRD+K+ N+LLD + K+ DFG SN T+ + G+ PY
Sbjct: 126 YCHQ--KRIVHRDLKAENLLLDADMNIKIADFGF------SNEFTVGGKLDTFCGSPPYA 177
Query: 293 PPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
PE + + DV+S GVIL L++G P D N
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM--YTENLT 521
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG SN T+ +
Sbjct: 120 IVSAVQYCHQ--KRIVHRDLKAENLLLDADMNIKIADFGF------SNEFTVGGKLDTFC 171
Query: 522 GTRPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
G+ PY PE + + DV+S G + T
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 203
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 88
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 89 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M++ + Y
Sbjct: 147 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MAQDIYRASYYR 201
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 108 KPYPRRGNKLGEGQFGTVY---YGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K Y ++ LGEG FG V Y +G +AVK L+
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSG---------- 79
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDS 219
++ E+ L H ++++ G C + +V EY+ GSL D L R + +
Sbjct: 80 --WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGL 133
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ A + E + YLH+ + IHRD+ + NVLLD + + K+GDFG+ K +
Sbjct: 134 AQLLLFAQQICEGMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 319
E+ + PE + + +DV+S+GV L ELLT
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 453 DSNKRYSIALG--------VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 504
D R+SI L + E + YLH+ + IHRD+ + NVLLD + + K+GDFG+
Sbjct: 124 DYLPRHSIGLAQLLLFAQQICEGMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Query: 505 KMSETSNVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
K + E+ + PE + + +DV+S+G +
Sbjct: 182 KAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K E+ A+K L+ E M+ E + L+
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDD---VECTMV-------EKRVLALL 76
Query: 176 KHVNLLRLLGLCNNIMNCI--VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
L L C ++ + V EY+ G L + +V + A ++ L
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISIGL 133
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+LH + II+RD+K NV+LD K+ DFG M + M + T GT Y+
Sbjct: 134 FFLHK--RGIIYRDLKLDNVMLDSEGHIKIADFG---MCKEHMMDGVTTREFCGTPDYIA 188
Query: 294 PEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + Q K+ D ++YGV+L E+L G P D + + ++E V + L KEA
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEA 247
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A ++ L +LH + II+RD+K NV+LD K+ DFG+ K V T
Sbjct: 126 AAEISIGLFFLHK--RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT---TREF 180
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGA 547
GT Y+ PE + Q K+ D ++YG
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGV 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 112 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R+ LG G FGTV+ G + + E ++ + +
Sbjct: 16 RKLKVLGSGVFGTVHKG-------VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
+ H +++RLLGLC +V +Y+ GSL D + + L + + +A+
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAK 126
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL ++HR++ + NVLL ++ DFG+ + + + +Y+E T + +
Sbjct: 127 GMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK-W 183
Query: 292 MPPEAMH-CQISTKTDVFSYGVILLELLT-GMKP 323
M E++H + + ++DV+SYGV + EL+T G +P
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 452 LDSNKRYSIALG----------VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 501
LD +++ ALG +A+ ++YL ++HR++ + NVLL ++ DF
Sbjct: 102 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADF 159
Query: 502 GIVKMSETSNVKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGAQI 549
G+ + + + +Y+E T + +M E++H + + ++DV+SYG +
Sbjct: 160 GVADLLPPDDKQLLYSEAKTPIK-WMALESIHFGKYTHQSDVWSYGVTV 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 128/317 (40%), Gaps = 65/317 (20%)
Query: 110 YPRR----GNKLGEGQFGTVY----YGKLKNG--MEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR G LG G FG V YG K G +++AVK L+ +E M
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 160 IPILLFENEVQTLSQCKHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYD------------ 206
+ L H N++ LLG C + +++EY C G L +
Sbjct: 102 MTQL-----------GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED 150
Query: 207 --------RLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 258
RL + L A VA+ + +L K +HRD+ + NVL+
Sbjct: 151 EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHG 208
Query: 259 FVPKLGDFGIVK--MSETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVI 313
V K+ DFG+ + MS+++ Y P +M PE++ I T K+DV+SYG++
Sbjct: 209 KVVKICDFGLARDIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL 263
Query: 314 LLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCV 372
L E+ + G+ P +Y +++ + + + I I+ + C
Sbjct: 264 LWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF----------YATEEIYIIMQSCWA 313
Query: 373 FEKDKRASMRDIVDLLS 389
F+ KR S ++ L
Sbjct: 314 FDSRKRPSFPNLTSFLG 330
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYT 517
A VA+ + +L K +HRD+ + NVL+ V K+ DFG+ + MS+++ V
Sbjct: 177 FAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV---VR 231
Query: 518 ENLTGTRPYMPPEAMHCQIST-KTDVFSYG 546
N +M PE++ I T K+DV+SYG
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYG 261
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 117 LGE-GQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+GE G FG VY + K +A + E M+ E+ L+ C
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKV-----IDTKSEEELEDYMV-------EIDILASC 64
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
H N+++LL N + C G D + + PL ++ + +AL+Y
Sbjct: 65 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNY 123
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE 295
LH IIHRD+K+ N+L + KL DFG+ ++ + ++ GT +M PE
Sbjct: 124 LHD--NKIIHRDLKAGNILFTLDGDIKLADFGV--SAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 296 AMHCQIST------KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 342
+ C+ S K DV+S G+ L+E+ P + N + + + E P
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP 232
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL ++ + +AL+YLH IIHRD+K+ N+L + KL DFG+ ++ +
Sbjct: 104 PLTESQIQVVCKQTLDALNYLHD--NKIIHRDLKAGNILFTLDGDIKLADFGV--SAKNT 159
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQT 570
++ GT +M PE + C+ S K + Y A + + IT +++A+ E
Sbjct: 160 RTXIQRRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIE------- 211
Query: 571 MLPGHHE 577
P HHE
Sbjct: 212 --PPHHE 216
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AVK ++ LF EV+ +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK----------LF-REVRIMKVL 70
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G PY P
Sbjct: 128 YCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDAFCGAPPYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G
Sbjct: 122 IVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDAFCGA 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG G V + E +AVK ++ E + +L EN V+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY-SIALGVAEALH 234
+ N+ L EY G L+DR+ P D+ + + + GV
Sbjct: 74 REGNIQYLF-----------LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 118
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
E + + + DV+S G++L +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 470 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
YLH + I HRD+K N+LLDE K+ DFG+ + +N + + + + GT PY+ P
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAP 175
Query: 530 EAMHCQI--STKTDVFSYG 546
E + + + DV+S G
Sbjct: 176 ELLKRREFHAEPVDVWSCG 194
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AV+ ++ LF EV+ +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK----------LF-REVRIMKVL 70
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G+ PY P
Sbjct: 128 YCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G+
Sbjct: 122 IVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDTFCGS 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AV+ ++ LF EV+ +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK----------LF-REVRIMKVL 70
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQ 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G+ PY P
Sbjct: 128 YCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDEFCGSPPYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G+
Sbjct: 122 IVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN----KLDEFCGS 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
V +Y+ G L+ L R L+ R+ A +A AL YLHSL+ I++RD+K N+
Sbjct: 116 FVLDYINGGELFYHLQRERCF--LEPRARF-YAAEIASALGYLHSLN--IVYRDLKPENI 170
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGV 312
LLD L DFG+ K + N T GT Y+ PE +H Q +T D + G
Sbjct: 171 LLDSQGHIVLTDFGLCKENIEHNST---TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGA 227
Query: 313 ILLELLTGMKPIDDNNTILYY 333
+L E+L G+ P NT Y
Sbjct: 228 VLYEMLYGLPPFYSRNTAEMY 248
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L+ R+ A +A AL YLHSL+ I++RD+K N+LLD L DFG+ K + N
Sbjct: 137 LEPRARF-YAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGA 547
T GT Y+ PE +H Q +T D + GA
Sbjct: 194 ST---TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGA 227
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYGA 547
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGV 205
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYGA 547
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGV 205
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 114 GNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LGEG F T + L E A+K LE + +P + E +V +
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHI--------IKENKVPYVTRERDV--M 84
Query: 173 SQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S+ H ++L ++ Y NG L + ++ + ++ R+ A +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTA-EIVS 141
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGTAQY 198
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
+ PE + + + K +D+++ G I+ +L+ G+ P N L + +++ E
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE 248
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLH K IIHRD+K N+LL+E+ ++ DFG K+ + K GT
Sbjct: 139 IVSALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVL-SPESKQARANXFVGT 195
Query: 524 RPYMPPEAMHCQISTK-TDVFSYGAQI 549
Y+ PE + + + K +D+++ G I
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIG 204
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AVK ++ LF EV+ +
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK----------LF-REVRIMKVL 63
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQ 120
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G+ PY P
Sbjct: 121 YCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAP 174
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G+
Sbjct: 115 IVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGS 168
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 198
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 88
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 89 --SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 147 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 201
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 114
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 115 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 173 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 227
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG GQF V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 88
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 89 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 147 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 201
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV-KMSETSNMKTMYTE 283
I L +AEA+ +LHS K ++HRD+K +N+ + V K+GDFG+V M + +T+ T
Sbjct: 123 IFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 284 --------NLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELL 318
GT+ YM PE +H S K D+FS G+IL ELL
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV-KMSETSNVKTMYTE 518
I L +AEA+ +LHS K ++HRD+K +N+ + V K+GDFG+V M + +T+ T
Sbjct: 123 IFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 519 --------NLTGTRPYMPPEAMHC-QISTKTDVFSYG 546
GT+ YM PE +H S K D+FS G
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 87
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 88 --SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 146 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 200
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 102
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 103 --SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 161 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 215
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+A+K ++ T+ + EV+ +
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDK-----------TQLNPTSLQKLFREVRIMKIL 71
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + ++ EY G ++D L ++ ++ + A+
Sbjct: 72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQ 128
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM--YTENLTGTRPYM 292
Y H K I+HRD+K+ N+LLD + K+ DFG SN T+ + G PY
Sbjct: 129 YCHQ--KRIVHRDLKAENLLLDADMNIKIADFGF------SNEFTVGGKLDAFCGAPPYA 180
Query: 293 PPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
PE + + DV+S GVIL L++G P D N
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTM--YTENLT 521
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG SN T+ +
Sbjct: 123 IVSAVQYCHQ--KRIVHRDLKAENLLLDADMNIKIADFGF------SNEFTVGGKLDAFC 174
Query: 522 GTRPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
G PY PE + + DV+S G + T
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 87
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 88 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 146 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 200
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALII---------- 102
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 103 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 161 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 215
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 104
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 105 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 163 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 217
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 94
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 95 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 153 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 207
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 102
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 103 --SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 161 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 215
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 32/233 (13%)
Query: 165 FENEVQTLSQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
F EV+ + +H N+L+ +G+ + +N I EY+ G+L + +++ P ++R
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT-EYIKGGTLRGIIKSMDSQYPW--SQR 110
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS---------- 272
S A +A + YLHS++ IIHRD+ S N L+ EN + DFG+ ++
Sbjct: 111 VSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 273 ---ETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPIDDNN 328
+ + K YT + G +M PE ++ + K DVFS+G++L E++ + D
Sbjct: 169 RSLKKPDRKKRYT--VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD-- 224
Query: 329 TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASM 381
Y ++ + VR LD+ + + + +CC + +KR S
Sbjct: 225 ---YLPRTMDFGLNVRGFLDR----YCPPNCPPSFFPITVRCCDLDPEKRPSF 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 455 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS------- 507
++R S A +A + YLHS++ IIHRD+ S N L+ EN + DFG+ ++
Sbjct: 108 SQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 508 ------ETSNVKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYG 546
+ + K YT + G +M PE ++ + K DVFS+G
Sbjct: 166 EGLRSLKKPDRKKRYT--VVGNPYWMAPEMINGRSYDEKVDVFSFG 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 115/285 (40%), Gaps = 37/285 (12%)
Query: 110 YPRRGNK--LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
Y G++ LG+G +G VY G+ L N + IA+K +
Sbjct: 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-------------LH 67
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+ KH N+++ LG N I E + GSL L R P D+ +
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGF 126
Query: 226 -ALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNMKTMYTE 283
+ E L YLH I+HRD+K NVL++ + V K+ DFG K N TE
Sbjct: 127 YTKQILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---PCTE 181
Query: 284 NLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
TGT YM PE + D++S G ++E+ TG P +Y L Q
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP--------FYELGEPQA 233
Query: 341 VPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
+ + K E E+ + KC + DKRA D++
Sbjct: 234 AMFKVGMFKVHPEIPESMSAEAKAFIL-KCFEPDPDKRACANDLL 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
+ E L YLH I+HRD+K NVL++ + V K+ DFG K N TE TG
Sbjct: 131 ILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTG 185
Query: 523 TRPYMPPEAMHC---QISTKTDVFSYGAQI 549
T YM PE + D++S G I
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTI 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 79
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 80 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ + Y
Sbjct: 138 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRASYYR 192
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V + + G E+AVK ++ T+ + EV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-----------TQLNSSSLQKLFREVRIXKVL 70
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + +V EY G ++D L ++ ++ + A+
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQ 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H K I+HRD+K+ N+LLD + K+ DFG N + G PY P
Sbjct: 128 YCHQ--KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK----LDAFCGAPPYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + + DV+S GVIL L++G P D N
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H K I+HRD+K+ N+LLD + K+ DFG N + G
Sbjct: 122 IVSAVQYCHQ--KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK----LDAFCGA 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGAQIKT 551
PY PE + + DV+S G + T
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 115/285 (40%), Gaps = 37/285 (12%)
Query: 110 YPRRGNK--LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
Y G++ LG+G +G VY G+ L N + IA+K +
Sbjct: 7 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-------------LH 53
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+ KH N+++ LG N I E + GSL L R P D+ +
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGF 112
Query: 226 -ALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNMKTMYTE 283
+ E L YLH I+HRD+K NVL++ + V K+ DFG K N TE
Sbjct: 113 YTKQILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---PCTE 167
Query: 284 NLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 340
TGT YM PE + D++S G ++E+ TG P +Y L Q
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP--------FYELGEPQA 219
Query: 341 VPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
+ + K E E+ + KC + DKRA D++
Sbjct: 220 AMFKVGMFKVHPEIPESMSAEAKAFIL-KCFEPDPDKRACANDLL 263
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
+ E L YLH I+HRD+K NVL++ + V K+ DFG K N TE TG
Sbjct: 117 ILEGLKYLHD--NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP---CTETFTG 171
Query: 523 TRPYMPPEAMHC---QISTKTDVFSYGAQI 549
T YM PE + D++S G I
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTI 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 108 KPYPRRGNKLGEGQFGTV---YYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K Y ++ LGEG FG V Y +G +AVK L+
Sbjct: 8 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG---------- 57
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDS 219
++ E++ L H ++++ G C + +V EY+ GSL D L R +
Sbjct: 58 --WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGL 111
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ A + E + YLH+ + IHR + + NVLLD + + K+GDFG+ K +
Sbjct: 112 AQLLLFAQQICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 169
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 319
E+ + PE + C+ +DV+S+GV L ELLT
Sbjct: 170 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
A + E + YLH+ + IHR + + NVLLD + + K+GDFG+ K + E+
Sbjct: 117 FAQQICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 520 LTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
+ PE + C+ +DV+S+G +
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTL 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 108 KPYPRRGNKLGEGQFGTV---YYGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K Y ++ LGEG FG V Y +G +AVK L+
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG---------- 56
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDS 219
++ E++ L H ++++ G C + +V EY+ GSL D L R +
Sbjct: 57 --WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGL 110
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ A + E + YLH+ + IHR + + NVLLD + + K+GDFG+ K +
Sbjct: 111 AQLLLFAQQICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 168
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 319
E+ + PE + C+ +DV+S+GV L ELLT
Sbjct: 169 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
A + E + YLH+ + IHR + + NVLLD + + K+GDFG+ K + E+
Sbjct: 116 FAQQICEGMAYLHA--QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 520 LTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
+ PE + C+ +DV+S+G +
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTL 204
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 166 ENEVQTLSQCKHVNLLRL---LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ E++ L +H ++ +L L N I +V EY G L+D + + L +
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIF--MVLEYCPGGELFDYIISQDR---LSEEET 110
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ + A+ Y+HS + HRD+K N+L DE KL DFG+ ++ K +
Sbjct: 111 RVVFRQIVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLC--AKPKGNKDYHL 166
Query: 283 ENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYY 333
+ G+ Y PE + + + ++ DV+S G++L L+ G P DD+N + Y
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY 219
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y+HS + HRD+K N+L DE KL DFG+ ++ K + + G+
Sbjct: 117 IVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLC--AKPKGNKDYHLQTCCGS 172
Query: 524 RPYMPPEAMHCQ--ISTKTDVFSYG 546
Y PE + + + ++ DV+S G
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMG 197
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG G+F V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV-KMSETSNMKTMYT- 282
I + +AEA+ +LHS K ++HRD+K +N+ + V K+GDFG+V M + +T+ T
Sbjct: 169 IFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 283 -------ENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELL 318
GT+ YM PE +H S K D+FS G+IL ELL
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV-KMSETSNVKTMYT- 517
I + +AEA+ +LHS K ++HRD+K +N+ + V K+GDFG+V M + +T+ T
Sbjct: 169 IFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 518 -------ENLTGTRPYMPPEAMHC-QISTKTDVFSYG 546
GT+ YM PE +H S K D+FS G
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G A+K L+ T L EN V S+
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRH 207
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+ L+ ++ + C V EY G L+ L+R D + Y + AL Y
Sbjct: 208 PFLTALKYSFQTHDRL-CFVMEYANGGELFFHLSR-ERVFSEDRARFYGAE--IVSALDY 263
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMP 293
LHS K +++RD+K N++LD++ K+ DFG+ K + + + MKT GT Y+
Sbjct: 264 LHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-----FCGTPEYLA 317
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + D + GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 376
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
+ AL YLHS K +++RD+K N++LD++ K+ DFG+ K + + + +KT
Sbjct: 257 IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-----FC 310
Query: 522 GTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 311 GTPEYLAPEVL 321
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 128
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 129 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ Y
Sbjct: 187 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRAGYYR 241
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G A+K L+ T L EN V S+
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRH 210
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+ L+ ++ + C V EY G L+ L+R D + Y + AL Y
Sbjct: 211 PFLTALKYSFQTHDRL-CFVMEYANGGELFFHLSR-ERVFSEDRARFYGAE--IVSALDY 266
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMP 293
LHS K +++RD+K N++LD++ K+ DFG+ K + + + MKT GT Y+
Sbjct: 267 LHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-----FCGTPEYLA 320
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + D + GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 379
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
+ AL YLHS K +++RD+K N++LD++ K+ DFG+ K + + + +KT
Sbjct: 260 IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-----FC 313
Query: 522 GTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 314 GTPEYLAPEVL 324
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 117 LGEGQFGTVYYGKLK------NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
LG G FG VY G++ + +++AVKTL EA +I
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII---------- 105
Query: 171 TLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN----KRYSI 225
S+ H N++R +G+ ++ I+ E M G L L P S+ +
Sbjct: 106 --SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYT 282
A +A YL IHRD+ + N LL V K+GDFG M+ Y
Sbjct: 164 ARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG---MARDIYRAGYYR 218
Query: 283 ENLTGTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT 319
+ P +MPPEA M ++KTD +S+GV+L E+ +
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 128
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 129 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 182
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNN 328
GTR YM PE + S ++D++S G+ L+E+ G PI +
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 128 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 181
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYG 546
GTR YM PE + S ++D++S G
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMG 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V+ + K + A+K L+ E M+ E V +L+
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMV-----EKRVLSLA-W 76
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H L + N V EY+ G L + + + D ++ A + L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
+LHS K I++RD+K N+LLD++ K+ DFG+ K + + K T GT Y+ P
Sbjct: 134 FLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNEFCGTPDYIAP 188
Query: 295 EAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
E + Q + D +S+GV+L E+L G P
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D ++ A + L +LHS K I++RD+K N+LLD++ K+ DFG+ K + +
Sbjct: 116 FDLSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 173
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
K T GT Y+ PE + Q + D +S+G
Sbjct: 174 AK---TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGV 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V+ + K + A+K L+ E M+ E V +L+
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMV-----EKRVLSLA-W 75
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H L + N V EY+ G L + + + D ++ A + L
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
+LHS K I++RD+K N+LLD++ K+ DFG+ K + + K T GT Y+ P
Sbjct: 133 FLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNXFCGTPDYIAP 187
Query: 295 EAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
E + Q + D +S+GV+L E+L G P
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D ++ A + L +LHS K I++RD+K N+LLD++ K+ DFG+ K + +
Sbjct: 115 FDLSRATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGA 547
K T GT Y+ PE + Q + D +S+G
Sbjct: 173 AK---TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGV 206
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 38/243 (15%)
Query: 114 GNKLGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G LGEG+FG+V G LK +++AVKT++ ++ I F +E
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK-----------LDNSSQREIEEFLSEA 87
Query: 170 QTLSQCKHVNLLRLLGLCNNIMN------CIVYEYMCNGSLYDRL--ARVNNTP---PLD 218
+ H N++RLLG+C + + ++ +M G L+ L +R+ P PL
Sbjct: 88 ACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ 147
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 278
+ ++ + +A + YL ++ +HRD+ + N +L ++ + DFG+ K + +
Sbjct: 148 TLLKFMV--DIALGMEYLS--NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD-- 201
Query: 279 TMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDD-NNTILYY 333
Y + P ++ E++ ++ T K+DV+++GV + E+ T GM P N +Y
Sbjct: 202 -YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD 260
Query: 334 YLV 336
YL+
Sbjct: 261 YLL 263
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEGQF TVY + KN +I A+K ++ A E++ L +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL--------REIKLLQEL 69
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N++ LL + N +V+++M + +N+ L + + L + L
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
YLH I+HRD+K N+LLDEN V KL DFG+ K + N Y + TR Y P
Sbjct: 127 YLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--RAYXHQVV-TRWYRAP 181
Query: 295 EAMHC--QISTKTDVFSYGVILLELL 318
E + D+++ G IL ELL
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELL 207
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ L YLH I+HRD+K N+LLDEN V KL DFG+ K + N Y + TR
Sbjct: 123 QGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--RAYXHQVV-TRW 177
Query: 526 YMPPEAM 532
Y PE +
Sbjct: 178 YRAPELL 184
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 136
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 137 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 190
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 136 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 189
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEG 578
GTR YM PE + S ++D++S G + + I + L+ M EG
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD-AKELELMFGCQVEG 248
Query: 579 D 579
D
Sbjct: 249 D 249
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
ENE+ L + KH N++ L + + + +V + + G L+DR+ D++ +
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---T 124
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMY 281
+ V +A++YLH + I+HRD+K N+L DE + DFG+ KM ++ +
Sbjct: 125 LIRQVLDAVYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS-- 180
Query: 282 TENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPI-DDNNTILY 332
GT Y+ PE + + +K D +S GVI LL G P D+N++ L+
Sbjct: 181 --TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLF 231
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V +A++YLH + I+HRD+K N+L DE + DFG+ KM +V +
Sbjct: 129 VLDAVYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS----TA 182
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + +K D +S G
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIG 209
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 45/291 (15%)
Query: 112 RRGNKLGEGQFGTVYYG-KLKNG----MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
R+ LG G FGTVY G + +G + +A+K L + A IL
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---------SPKANKEIL--- 67
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+E ++ + RLLG+C +V + M G L D + N L S +
Sbjct: 68 DEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVR--ENRGRLGSQDLLNWC 125
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ +A+ + YL + ++HRD+ + NVL+ K+ DFG+ ++ + +T Y +
Sbjct: 126 MQIAKGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDID--ETEYHAD-G 180
Query: 287 GTRP--YMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVP 342
G P +M E+ + + + ++DV+SYGV + EL+T G KP D +P
Sbjct: 181 GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG--------------IP 226
Query: 343 VREVLD-KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
RE+ D E GE + + T+ + ++ KC + + + R R++V S+
Sbjct: 227 AREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSR 277
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L S + + +A+ + YL + ++HRD+ + NVL+ K+ DFG+ ++ +
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDID- 172
Query: 512 VKTMYTENLTGTRP--YMPPEA-MHCQISTKTDVFSYGAQI 549
+T Y + G P +M E+ + + + ++DV+SYG +
Sbjct: 173 -ETEYHAD-GGKVPIKWMALESILRRRFTHQSDVWSYGVTV 211
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 112 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
+R KLG G +G V K K G E A+K ++ A++ +EV
Sbjct: 7 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTS----NSGALL------DEVA 56
Query: 171 TLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
L Q H N+++L + N +V E G L+D + +D+ I V
Sbjct: 57 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQV 113
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSN-MKTMYTENL 285
YLH + I+HRD+K N+LL+ + + K+ DFG+ E MK E L
Sbjct: 114 LSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK----ERL 167
Query: 286 TGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
GT Y+ PE + + K DV+S GVIL LL G P
Sbjct: 168 -GTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF 205
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 470 YLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
YLH + I+HRD+K N+LL+ + + K+ DFG +S V E L GT Y
Sbjct: 119 YLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFG---LSAHFEVGGKMKERL-GTAYY 172
Query: 527 MPPEAMHCQISTKTDVFSYG 546
+ PE + + K DV+S G
Sbjct: 173 IAPEVLRKKYDEKCDVWSCG 192
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 112 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
+R KLG G +G V K K G E A+K ++ A++ +EV
Sbjct: 24 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTS----NSGALL------DEVA 73
Query: 171 TLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
L Q H N+++L + N +V E G L+D + +D+ I V
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQV 130
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
YLH + I+HRD+K N+LL+ + + K+ DFG+ E +
Sbjct: 131 LSGTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK----MKERL 184
Query: 287 GTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
GT Y+ PE + + K DV+S GVIL LL G P
Sbjct: 185 GTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF 222
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 470 YLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
YLH + I+HRD+K N+LL+ + + K+ DFG +S V E L GT Y
Sbjct: 136 YLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFG---LSAHFEVGGKMKERL-GTAYY 189
Query: 527 MPPEAMHCQISTKTDVFSYG 546
+ PE + + K DV+S G
Sbjct: 190 IAPEVLRKKYDEKCDVWSCG 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLAR-VNNTPPLDSNKR 222
+EV L + KH N++R + N IV EY G L + + LD
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 223 YSIALGVAEALHYLHSLSK---PIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ + AL H S ++HRD+K ANV LD KLGDFG+ ++ N T
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDT 170
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPI 324
+ + GT YM PE M + K+D++S G +L EL M P
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM-HCQI 536
++HRD+K ANV LD KLGDFG+ ++ N T + + GT YM PE M
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 537 STKTDVFSYG 546
+ K+D++S G
Sbjct: 194 NEKSDIWSLG 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G ++G G FG V+ G+L+ + +AVK+ F E + L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK------------FLQEARIL 166
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
Q H N++RL+G+C + + G + R L + A
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAG 225
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL S K IHRD+ + N L+ E V K+ DFG+ + E + +
Sbjct: 226 MEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWT 282
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + S+++DV+S+G++L E + G P
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
A + YL S K IHRD+ + N L+ E V K+ DFG+ + E V
Sbjct: 222 AAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVP 278
Query: 524 RPYMPPEAM-HCQISTKTDVFSYG 546
+ PEA+ + + S+++DV+S+G
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFG 302
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 168 EVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
E+Q L +C ++ G ++ I E+M GSL L + P K ++
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VS 172
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 173 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFV 226
Query: 287 GTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 171 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 224
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEG 578
GTR YM PE + S ++D++S G + + I + L+ M EG
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD-AKELELMFGCQVEG 283
Query: 579 D 579
D
Sbjct: 284 D 284
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V K+ G ++AVK ++ LLF NEV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 98
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H N++ + L + + +V E++ G+L D + ++ + ++ L V A
Sbjct: 99 YHHDNVVDMYSSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRA 153
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L YLH+ + +IHRD+KS ++LL + KL DFG K + L GT +M
Sbjct: 154 LSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVGTPYWM 208
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + T+ D++S G++++E++ G P
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V AL YLH+ + +IHRD+KS ++LL + KL DFG K +
Sbjct: 145 TVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RK 199
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + T+ D++S G +
Sbjct: 200 XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMV 231
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 168 EVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
E+Q L +C ++ G ++ I E+M GSL L + P K ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VS 110
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 111 IAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSFV 164
Query: 287 GTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 109 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 162
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYG 546
GTR YM PE + S ++D++S G
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMG 190
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 109
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 110 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 163
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 109 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 162
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEG 578
GTR YM PE + S ++D++S G + + I + L+ M EG
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA-KELELMFGCQVEG 221
Query: 579 D 579
D
Sbjct: 222 D 222
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 109
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 110 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 163
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 109 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 162
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEG 578
GTR YM PE + S ++D++S G + + I + L+ M EG
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA-KELELMFGCQVEG 221
Query: 579 D 579
D
Sbjct: 222 D 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 67
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +AE
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAE 125
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 126 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 182
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 228
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 229 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 272
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+AE ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 123 IAEGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 179
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTV 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 109
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 110 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 163
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 109 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 162
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEG 578
GTR YM PE + S ++D++S G + + I + L+ M EG
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA-KELELMFGCQVEG 221
Query: 579 D 579
D
Sbjct: 222 D 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 109
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 110 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 163
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 324
GTR YM PE + S ++D++S G+ L+E+ G PI
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 109 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 162
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEG 578
GTR YM PE + S ++D++S G + + I + L+ M EG
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA-KELELMFGCQVEG 221
Query: 579 D 579
D
Sbjct: 222 D 222
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 41/223 (18%)
Query: 116 KLGEGQFGTVYYG---KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+LG G FG+V G K +++A+K L+ TE M E Q +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD-----TEEMM-------REAQIM 390
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALG-VAE 231
Q + ++RL+G+C +V E G L+ L KR I + VAE
Sbjct: 391 HQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLV----------GKREEIPVSNVAE 440
Query: 232 ALH-------YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
LH YL K +HR++ + NVLL K+ DFG+ K + + YT
Sbjct: 441 LLHQVSMGMKYLEE--KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD--SYYTAR 496
Query: 285 LTGTRP--YMPPEAMHCQ-ISTKTDVFSYGVILLELLT-GMKP 323
G P + PE ++ + S+++DV+SYGV + E L+ G KP
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 420 LHYTGIPVIILDTGETKQCQLFKLARVNNTPPLDS---NKRYSIALG-VAEALH------ 469
+H P I+ G + L + + PL KR I + VAE LH
Sbjct: 390 MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449
Query: 470 -YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP--Y 526
YL K +HR++ + NVLL K+ DFG+ K + + YT G P +
Sbjct: 450 KYLEE--KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD--SYYTARSAGKWPLKW 505
Query: 527 MPPEAMHCQ-ISTKTDVFSYG 546
PE ++ + S+++DV+SYG
Sbjct: 506 YAPECINFRKFSSRSDVWSYG 526
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 106 NRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
N Y G +LG G F V + K+ G++ A K ++ E
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED------- 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E EV L + +H N++ L + N + I + E + G L+D LA + L +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMKT 279
+ ++YLHSL I H D+K N++L + VP K+ DFG+ + N
Sbjct: 118 EFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-- 173
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI 324
+N+ GT ++ PE ++ + + + D++S GVI LL+G P
Sbjct: 174 --FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTENLTG 522
++YLHSL I H D+K N++L + VP K+ DFG+ + N +N+ G
Sbjct: 126 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFG 179
Query: 523 TRPYMPPEAMHCQ-ISTKTDVFSYG 546
T ++ PE ++ + + + D++S G
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIG 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 104/239 (43%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V + K E+ AVK L+ E M+ E + L+
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD---VECTMV-------EKRVLALP 398
Query: 176 KHVNLLRLLGLCNNIMNCI--VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
L L C M+ + V EY+ G L + +V A +A L
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGL 455
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+L S K II+RD+K NV+LD K+ DFG+ K + + T+ GT Y+
Sbjct: 456 FFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIA 510
Query: 294 PEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + Q K+ D +++GV+L E+L G P + + + ++E V + + KEA
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEA 569
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A +A L +L S K II+RD+K NV+LD K+ DFG+ K + V T+
Sbjct: 448 AAEIAIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKXF 502
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + Q K+ D +++G
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFG 529
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ V N ++
Sbjct: 57 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV--VGNKRLKEAT 114
Query: 221 KR---YSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSE 273
+ Y + L A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + E
Sbjct: 115 CKLYFYQMLL----AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 168
Query: 274 TSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNT 329
TS M+T L GT Y+ PE + + D +S GVIL L+G P ++ T
Sbjct: 169 TSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 223
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 125 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 177
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 178 TPTYLAPEVL 187
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 73
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 131
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 132 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 234
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 235 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 278
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 129 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 185
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTV 212
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ V N ++
Sbjct: 58 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV--VGNKRLKEAT 115
Query: 221 KR---YSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSE 273
+ Y + L A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + E
Sbjct: 116 CKLYFYQMLL----AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
Query: 274 TSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNT 329
TS M+T L GT Y+ PE + + D +S GVIL L+G P ++ T
Sbjct: 170 TSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 178
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 179 TPTYLAPEVL 188
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 80
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 138
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 139 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 195
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 241
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 242 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 285
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 136 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 192
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTV 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLAR-VNNTPPLDSNKR 222
+EV L + KH N++R + N IV EY G L + + LD
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 223 YSIALGVAEALHYLHSLSK---PIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ + AL H S ++HRD+K ANV LD KLGDFG+ ++ N T
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDT 170
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPI 324
+ + GT YM PE M + K+D++S G +L EL M P
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM-HCQI 536
++HRD+K ANV LD KLGDFG+ ++ N T + + GT YM PE M
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 537 STKTDVFSYG 546
+ K+D++S G
Sbjct: 194 NEKSDIWSLG 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ V N ++
Sbjct: 58 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV--VGNKRLKEAT 115
Query: 221 KR---YSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSE 273
+ Y + L A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + E
Sbjct: 116 CKLYFYQMLL----AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
Query: 274 TSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNT 329
TS M+T L GT Y+ PE + + D +S GVIL L+G P ++ T
Sbjct: 170 TSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 178
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 179 TPTYLAPEVL 188
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ V N ++
Sbjct: 58 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV--VGNKRLKEAT 115
Query: 221 KR---YSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSE 273
+ Y + L A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + E
Sbjct: 116 CKLYFYQMLL----AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
Query: 274 TSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNT 329
TS M+T L GT Y+ PE + + D +S GVIL L+G P ++ T
Sbjct: 170 TSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 178
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 179 TPTYLAPEVL 188
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSL--YDRLARVNNTPPLDSNK 221
F+NE+Q ++ K+ L G+ N I+YEYM N S+ +D V LD N
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV-----LDKNY 144
Query: 222 RYSIALGVAE--------ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 273
I + V + + Y+H+ K I HRDVK +N+L+D+N KL DFG E
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFG-----E 198
Query: 274 TSNMKTMYTENLTGTRPYMPPEAMHCQIS---TKTDVFSYGVILLELLTGMKPI 324
+ M + GT +MPPE + S K D++S G+ L + + P
Sbjct: 199 SEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
I V + Y+H+ K I HRDVK +N+L+D+N KL DFG E+ + +
Sbjct: 156 IIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFG-----ESEYMVDKKIKG 209
Query: 520 LTGTRPYMPPEAMHCQIS---TKTDVFSYG 546
GT +MPPE + S K D++S G
Sbjct: 210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLG 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 112 RRGNKLGEGQFGTVYYGKL------KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL- 164
R +LGE +FG VY G L + +A+KTL+ + A P+
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-------------DKAEGPLREE 75
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTP-----PLD 218
F +E ++ +H N++ LLG+ +++ Y +G L++ L V +P D
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTD 133
Query: 219 SNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGIVK 270
++ AL + +H + + S ++H+D+ + NVL+ + K+ D G+ +
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 271 MSETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
++ + +L R +M PEA M+ + S +D++SYGV+L E+ + G++P
Sbjct: 194 EVYAADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S ++H+D+ + NVL+ + K+ D G+ + ++ + +L
Sbjct: 154 IAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 524 RPYMPPEA-MHCQISTKTDVFSYG 546
R +M PEA M+ + S +D++SYG
Sbjct: 212 R-WMAPEAIMYGKFSIDSDIWSYG 234
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 114 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G ++G G FG V+ G+L+ + +AVK+ F E + L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK------------FLQEARIL 166
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
Q H N++RL+G+C + + G + R L + A
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAG 225
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL S K IHRD+ + N L+ E V K+ DFG+ + E + +
Sbjct: 226 MEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWT 282
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 323
PEA+ + + S+++DV+S+G++L E + G P
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
A + YL S K IHRD+ + N L+ E V K+ DFG+ + E V
Sbjct: 222 AAAGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVP 278
Query: 524 RPYMPPEAM-HCQISTKTDVFSYG 546
+ PEA+ + + S+++DV+S+G
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFG 302
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 24/180 (13%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ V N ++
Sbjct: 64 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV--VGNKRLKEAT 121
Query: 221 KR---YSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSE 273
+ Y + L A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + E
Sbjct: 122 CKLYFYQMLL----AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 175
Query: 274 TSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNT 329
TS M+T L GT Y+ PE + + D +S GVIL L+G P ++ T
Sbjct: 176 TSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 132 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 184
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 185 TPTYLAPEVL 194
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 35/233 (15%)
Query: 112 RRGNKLGEGQFGTVYYGKL------KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL- 164
R +LGE +FG VY G L + +A+KTL+ + A P+
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-------------DKAEGPLREE 58
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVN---NTPPLDSN 220
F +E ++ +H N++ LLG+ +++ Y +G L++ L + + D +
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 221 KRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
+ AL + +H + + S ++H+D+ + NVL+ + K+ D G+ +
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 273 ETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT-GMKP 323
++ + +L R +M PEA M+ + S +D++SYGV+L E+ + G++P
Sbjct: 179 YAADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A + YL S ++H+D+ + NVL+ + K+ D G+ + ++ + +L
Sbjct: 137 IAAGMEYLSS--HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 524 RPYMPPEA-MHCQISTKTDVFSYG 546
R +M PEA M+ + S +D++SYG
Sbjct: 195 R-WMAPEAIMYGKFSIDSDIWSYG 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ N
Sbjct: 197 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVV---------GN 247
Query: 221 KRYSIA------LGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK- 270
KR A + A+ YLH IIHRD+K NVLL +E+ + K+ DFG K
Sbjct: 248 KRLKEATCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 305
Query: 271 MSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDD 326
+ ETS M+T L GT Y+ PE + + D +S GVIL L+G P +
Sbjct: 306 LGETSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
Query: 327 NNT 329
+ T
Sbjct: 361 HRT 363
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 265 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 317
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 318 TPTYLAPEVL 327
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 30/183 (16%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
P L E E++ L + H ++++ + IV E M G L+D++ N
Sbjct: 183 PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVV---------GN 233
Query: 221 KRYSIA------LGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK- 270
KR A + A+ YLH IIHRD+K NVLL +E+ + K+ DFG K
Sbjct: 234 KRLKEATCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291
Query: 271 MSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDD 326
+ ETS M+T L GT Y+ PE + + D +S GVIL L+G P +
Sbjct: 292 LGETSLMRT-----LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
Query: 327 NNT 329
+ T
Sbjct: 347 HRT 349
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
A+ YLH IIHRD+K NVLL +E+ + K+ DFG K + ETS ++T L G
Sbjct: 251 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-----LCG 303
Query: 523 TRPYMPPEAM 532
T Y+ PE +
Sbjct: 304 TPTYLAPEVL 313
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 84 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 138
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MKT GT Y+ PE + D +
Sbjct: 139 LMLDKDGHIKITDFGLCKEGISDGATMKT-----FCGTPEYLAPEVLEDNDYGRAVDWWG 193
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 194 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 235
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K +S+ + +KT
Sbjct: 117 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-----FC 169
Query: 522 GTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 170 GTPEYLAPEVL 180
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 81 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 135
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MKT GT Y+ PE + D +
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKT-----FCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 232
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K +S+ + +KT
Sbjct: 114 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-----FC 166
Query: 522 GTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 167 GTPEYLAPEVL 177
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 30/237 (12%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+G+G FG V+ + K G ++A+K + E PI E++ L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKV----------LMENEKEGFPITALR-EIKILQL 73
Query: 175 CKHVNLLRLLGLCNNIMN----C-----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
KH N++ L+ +C + C +V+++ C L L+ V L KR +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKFTLSEIKR--V 130
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTEN 284
+ L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N
Sbjct: 131 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 285 LTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
T Y PPE + + D++ G I+ E+ T PI NT + ++ Q
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQ 244
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP 525
L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N T
Sbjct: 137 GLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 526 YMPPEAM 532
Y PPE +
Sbjct: 195 YRPPELL 201
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 81 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 135
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MKT GT Y+ PE + D +
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKT-----FCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 232
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMYTENLT 521
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K +S+ + +KT
Sbjct: 114 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-----FC 166
Query: 522 GTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 167 GTPEYLAPEVL 177
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 108 KPYPRRGNKLGEGQFGTVY---YGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K Y ++ LGEG FG V Y +G +AVK L+
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG---------- 62
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDS 219
++ E+ L H ++++ G C + +V EY+ GSL D L R + +
Sbjct: 63 --WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGL 116
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ A + E + YLHS + IHR++ + NVLLD + + K+GDFG+ K +
Sbjct: 117 AQLLLFAQQICEGMAYLHS--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 319
E+ + PE + + +DV+S+GV L ELLT
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 453 DSNKRYSIALG--------VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 504
D R+SI L + E + YLHS + IHR++ + NVLLD + + K+GDFG+
Sbjct: 107 DYLPRHSIGLAQLLLFAQQICEGMAYLHS--QHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Query: 505 KMSETSNVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
K + E+ + PE + + +DV+S+G +
Sbjct: 165 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 109 PYPRRGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
PY R LGEG FG V K ++A+K + + E
Sbjct: 10 PYIIR-ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMH----------MRVER 58
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
E+ L +H ++++L + + ++ G L+D + D +R+
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTE-DEGRRF--FQ 115
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG 287
+ A+ Y H I+HRD+K N+LLD+N K+ DFG+ + N + + G
Sbjct: 116 QIICAIEYCHR--HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCG 169
Query: 288 TRPYMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDD 326
+ Y PE ++ ++ + DV+S G++L +L G P DD
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
A+ Y H I+HRD+K N+LLD+N K+ DFG+ + N + + G+ Y
Sbjct: 120 AIEYCHR--HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCGSPNY 173
Query: 527 MPPEAMHCQI--STKTDVFSYG 546
PE ++ ++ + DV+S G
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCG 195
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R +G G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EYM G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ K+ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ K+ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 70
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 128
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 129 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 231
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 232 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 275
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 126 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 182
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTV 209
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 71
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDN--IGSQYLLNWCVQIAK 129
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 130 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 186
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 232
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 233 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 276
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 127 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 183
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTV 210
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R +G G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EYM G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ K+ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ K+ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 70
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 128
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 129 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 231
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 126 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 182
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTV 209
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 104/239 (43%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V + K E+ AVK L+ E M+ E + L+
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD---VECTMV-------EKRVLALP 77
Query: 176 KHVNLLRLLGLCNNIMNCI--VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
L L C M+ + V EY+ G L + +V A +A L
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGL 134
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+L S K II+RD+K NV+LD K+ DFG+ K + + T+ GT Y+
Sbjct: 135 FFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKXFCGTPDYIA 189
Query: 294 PEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + Q K+ D +++GV+L E+L G P + + + ++E V + + KEA
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEA 248
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A +A L +L S K II+RD+K NV+LD K+ DFG+ K + V T+
Sbjct: 127 AAEIAIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKXF 181
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + Q K+ D +++G
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFG 208
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 74
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 132
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 133 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 189
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 235
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 236 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 279
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 130 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 186
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTV 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+G+G FG V+ + K G ++A+K + E PI E++ L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKV----------LMENEKEGFPITALR-EIKILQL 72
Query: 175 CKHVNLLRLLGLCNNIMN----C-----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
KH N++ L+ +C + C +V+++ C L L+ V L KR +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKFTLSEIKR--V 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTEN 284
+ L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N
Sbjct: 130 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 285 LTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNT 329
T Y PPE + + D++ G I+ E+ T PI NT
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 233
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP 525
L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N T
Sbjct: 136 GLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 526 YMPPEAMHCQISTKTDVFSYGA 547
Y PPE + + + +GA
Sbjct: 194 YRPPELLLGERDYGPPIDLWGA 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 71
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 129
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 130 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 186
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 232
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 233 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 276
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 127 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 183
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTV 210
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 36/236 (15%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ-TLSQ 174
LG+G FG V ++K ++ AVK L+ ++L +++V+ T+++
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKD-----------------VILQDDDVECTMTE 73
Query: 175 CKHVNLLRLLGLCNNIMNCI--------VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
+ ++L R + C V E++ G L + + + D + A
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYA 130
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ AL +LH K II+RD+K NVLLD KL DFG+ K + + T
Sbjct: 131 AEIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA---TFC 185
Query: 287 GTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
GT Y+ PE + + D ++ GV+L E+L G P + N + ++ EV
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
D + A + AL +LH K II+RD+K NVLLD KL DFG+ K +
Sbjct: 121 FDEARARFYAAEIISALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178
Query: 512 VKTMYTENLTGTRPYMPPEAMH 533
V T GT Y+ PE +
Sbjct: 179 VTTA---TFCGTPDYIAPEILQ 197
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
I L +AL++L K IIHRD+K +N+LLD + KL DFGI S KT
Sbjct: 130 ITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT----R 184
Query: 285 LTGTRPYMPPEAMHCQIS-----TKTDVFSYGVILLELLTGMKPIDDNNTIL 331
G RPYM PE + S ++DV+S G+ L EL TG P N++
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
I L +AL++L K IIHRD+K +N+LLD + KL DFGI S KT
Sbjct: 130 ITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT----R 184
Query: 520 LTGTRPYMPPEAMHCQIS-----TKTDVFSYG 546
G RPYM PE + S ++DV+S G
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 30/237 (12%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+G+G FG V+ + K G ++A+K + E PI E++ L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKV----------LMENEKEGFPITALR-EIKILQL 73
Query: 175 CKHVNLLRLLGLCNNIMN----C-----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
KH N++ L+ +C + C +V+++ C L L+ V L KR +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDF-CEHDLAGLLSNVLVKFTLSEIKR--V 130
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTEN 284
+ L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N
Sbjct: 131 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 285 LTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
T Y PPE + + D++ G I+ E+ T PI NT + ++ Q
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQ 244
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP 525
L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N T
Sbjct: 137 GLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 526 YMPPEAMHCQISTKTDVFSYGA 547
Y PPE + + + +GA
Sbjct: 195 YRPPELLLGERDYGPPIDLWGA 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 72
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 130
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 131 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 233
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 277
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 128 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 184
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTV 211
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 73
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 131
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 132 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 234
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 235 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 278
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 129 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 185
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTV 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+G+G FG V+ + K G ++A+K + E PI E++ L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKV----------LMENEKEGFPITALR-EIKILQL 73
Query: 175 CKHVNLLRLLGLCNNIMN----C-----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
KH N++ L+ +C + C +V+++ C L L+ V L KR +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDF-CEHDLAGLLSNVLVKFTLSEIKR--V 130
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTEN 284
+ L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N
Sbjct: 131 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 285 LTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNT 329
T Y PPE + + D++ G I+ E+ T PI NT
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRP 525
L+Y+H I+HRD+K+ANVL+ + V KL DFG+ + S N + N T
Sbjct: 137 GLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 526 YMPPEAMHCQISTKTDVFSYGA 547
Y PPE + + + +GA
Sbjct: 195 YRPPELLLGERDYGPPIDLWGA 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 70
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDN--IGSQYLLNWCVQIAK 128
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 129 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 231
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 126 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 182
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTV 209
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 95
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 153
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 154 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 210
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 256
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 257 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 300
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 151 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 207
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTV 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G A+K L+ T L EN V S+
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRH 68
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+ L+ ++ + C V EY G L+ L+R D + Y + AL Y
Sbjct: 69 PFLTALKYSFQTHDRL-CFVMEYANGGELFFHLSR-ERVFSEDRARFYGAE--IVSALDY 124
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMP 293
LHS K +++RD+K N++LD++ K+ DFG+ K + + + MK GT Y+
Sbjct: 125 LHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-----FCGTPEYLA 178
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + D + GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 237
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS K +++RD+K N++LD++ K+ DFG+ K + TM + GT
Sbjct: 118 IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATM--KXFCGT 173
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 174 PEYLAPEVL 182
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 76
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 134
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 135 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 191
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 237
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 238 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 281
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 132 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 188
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTV 215
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G A+K L+ T L EN V S+
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRH 67
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+ L+ ++ + C V EY G L+ L+R D + Y + AL Y
Sbjct: 68 PFLTALKYSFQTHDRL-CFVMEYANGGELFFHLSR-ERVFSEDRARFYGAE--IVSALDY 123
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMP 293
LHS K +++RD+K N++LD++ K+ DFG+ K + + + MK GT Y+
Sbjct: 124 LHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-----FCGTPEYLA 177
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + D + GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 236
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS K +++RD+K N++LD++ K+ DFG+ K + TM + GT
Sbjct: 117 IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATM--KXFCGT 172
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 173 PEYLAPEVL 181
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 70
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 128
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 129 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 231
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 126 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 182
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTV 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG + V L+NG E AVK +E +A +F EV+TL QC
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIE------------KQAGHSRSRVF-REVETLYQC 67
Query: 176 K-HVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ + N+L L+ ++ +V+E + GS+ LA + + + + VA AL
Sbjct: 68 QGNKNILELIEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 234 HYLHSLSKPIIHRDVKSANVLLD--ENFVP-KLGDFGIVKMSETSNMKT-MYTENLT--- 286
+LH+ K I HRD+K N+L + E P K+ DF + + +N T + T LT
Sbjct: 125 DFLHT--KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 287 GTRPYMPPEAMHCQISTKT------DVFSYGVILLELLTGMKPI 324
G+ YM PE + T D++S GV+L +L+G P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 443 LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD--ENFVP-KLG 499
LA + + + + VA AL +LH+ K I HRD+K N+L + E P K+
Sbjct: 99 LAHIQKQKHFNEREASRVVRDVAAALDFLHT--KGIAHRDLKPENILCESPEKVSPVKIC 156
Query: 500 DFGIVKMSETSNVKT-MYTENLT---GTRPYMPPEAM 532
DF + + +N T + T LT G+ YM PE +
Sbjct: 157 DFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 72
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 130
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 131 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 233
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 277
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 128 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 184
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTV 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L P K +
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK---V 119
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V L YL + I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 120 SIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANSF 173
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 344
GTR YM PE + S ++D++S G+ L+EL G PI + + + R
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL------EAIFGR 227
Query: 345 EVLDKEAGE 353
V+D E GE
Sbjct: 228 PVVDGEEGE 236
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V L YL + I+HRDVK +N+L++ KL DFG+ + + +
Sbjct: 119 VSIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDSMANS 172
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYG 546
GTR YM PE + S ++D++S G
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMG 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 166 ENEVQTLSQCKHVNLLRLLGL-----CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
E EV +L KH N+L+ +G ++ ++ + GSL D L + N
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWN 121
Query: 221 KRYSIALGVAEALHYLH-------SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKMS 272
+ IA +A L YLH KP I HRD+KS NVLL N + DFG+
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVF------SYGVILLELLTGMKPIDD 326
E T GTR YM PE + I+ + D F + G++L EL + D
Sbjct: 182 EAGK-SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD- 239
Query: 327 NNTILYYYLVVEQEV 341
+ Y L E+E+
Sbjct: 240 -GPVDEYMLPFEEEI 253
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 455 NKRYSIALGVAEALHYLH-------SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKM 506
N+ IA +A L YLH KP I HRD+KS NVLL N + DFG+
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 507 SETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVF 543
E T GTR YM PE + I+ + D F
Sbjct: 181 FEAGK-SAGDTHGQVGTRRYMAPEVLEGAINFQRDAF 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 73
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 131
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 132 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 234
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 235 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 278
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 129 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 185
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTV 212
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 73
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 131
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 132 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 188
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 234
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 235 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 278
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 129 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 185
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTV 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 22/239 (9%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K K G A+K L+ T L EN V S+
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--------LTENRVLQNSRH 69
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+ L+ ++ + C V EY G L+ L+R D + Y + AL Y
Sbjct: 70 PFLTALKYSFQTHDRL-CFVMEYANGGELFFHLSR-ERVFSEDRARFYGAE--IVSALDY 125
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMP 293
LHS K +++RD+K N++LD++ K+ DFG+ K + + + MK GT Y+
Sbjct: 126 LHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-----FCGTPEYLA 179
Query: 294 PEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
PE + D + GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 238
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS K +++RD+K N++LD++ K+ DFG+ K + TM + GT
Sbjct: 119 IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATM--KXFCGT 174
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 175 PEYLAPEVL 183
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 128/319 (40%), Gaps = 46/319 (14%)
Query: 77 QEEANNKTEYIGELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYG-KLKNGME 135
QEE N + + I EL +A N + + ++G G F TVY G + +E
Sbjct: 1 QEERNQQQDDIEELET-------KAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVE 53
Query: 136 IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMN--- 192
+A L+ F+ E + L +H N++R + +
Sbjct: 54 VAWCELQDRKLTKSERQR-----------FKEEAEXLKGLQHPNIVRFYDSWESTVKGKK 102
Query: 193 CIVY--EYMCNGSLYDRLAR--VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 248
CIV E +G+L L R V L S R + + L +LH+ + PIIHRD+
Sbjct: 103 CIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ-----ILKGLQFLHTRTPPIIHRDL 157
Query: 249 KSANVLL-DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDV 307
K N+ + K+GD G+ + S + + + GT + PE + DV
Sbjct: 158 KCDNIFITGPTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFXAPEXYEEKYDESVDV 212
Query: 308 FSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVF 367
+++G LE T P + Y V V + +++ + + I+
Sbjct: 213 YAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGV--------KPASFDKVAIPEVKEII- 263
Query: 368 EKCCVFEKDKRASMRDIVD 386
E C KD+R S++D+++
Sbjct: 264 EGCIRQNKDERYSIKDLLN 282
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNVKTMYTENLTG 522
+ + L +LH+ + PIIHRD+K N+ + K+GD G+ + S + + + G
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----FAKAVIG 192
Query: 523 TRPYMPPEAMHCQISTKTDVFSYG 546
T + PE + DV+++G
Sbjct: 193 TPEFXAPEXYEEKYDESVDVYAFG 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 108 KPYPRRGNKLGEGQFGTVY---YGKLKNGME--IAVKTLEXXXXXXXXXXXXTEAAMIPI 162
K Y ++ LGEG FG V Y +G +AVK L+
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG---------- 62
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDS 219
++ E+ L H ++++ G C + +V EY+ GSL D L R + +
Sbjct: 63 --WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGL 116
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ A + E + YLH+ + IHR++ + NVLLD + + K+GDFG+ K +
Sbjct: 117 AQLLLFAQQICEGMAYLHA--QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT 319
E+ + PE + + +DV+S+GV L ELLT
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 453 DSNKRYSIALG--------VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 504
D R+SI L + E + YLH+ + IHR++ + NVLLD + + K+GDFG+
Sbjct: 107 DYLPRHSIGLAQLLLFAQQICEGMAYLHA--QHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Query: 505 KMSETSNVKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
K + E+ + PE + + +DV+S+G +
Sbjct: 165 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 77
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 135
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 136 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 238
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 133 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 189
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTV 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 64
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 122
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 123 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 179
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 225
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 226 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 269
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 120 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 176
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTV 203
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 112 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
+R KLG G +G V + K +E A+K + E EV
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-----------EVA 88
Query: 171 TLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
L H N+++L + N +V E G L+D + +D+ I V
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA---VIIKQV 145
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ YLH + I+HRD+K N+LL+ ++ + K+ DFG+ + E N K M E L
Sbjct: 146 LSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKM-KERL- 199
Query: 287 GTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
GT Y+ PE + + K DV+S GVIL LL G P
Sbjct: 200 GTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPF 237
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V + YLH + I+HRD+K N+LL+ ++ + K+ DFG+ + E N K M E L
Sbjct: 145 VLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKM-KERL 199
Query: 521 TGTRPYMPPEAMHCQISTKTDVFSYG 546
GT Y+ PE + + K DV+S G
Sbjct: 200 -GTAYYIAPEVLRKKYDEKCDVWSIG 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 72
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 130
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG K+ K + E +
Sbjct: 131 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 233
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 234 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 277
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG K+ K + E
Sbjct: 128 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVP 184
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTV 211
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L +C ++ G ++ I E+M GSL L + P K +
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---V 112
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
++ V + L YL K I+HRDVK +N+L++ KL DFG+ + +
Sbjct: 113 SIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDEMANEF 166
Query: 286 TGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKP 323
GTR YM PE + S ++D++S G+ L+E+ G P
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+++ V + L YL K I+HRDVK +N+L++ KL DFG+ + +
Sbjct: 112 VSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDEMANE 165
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYG 546
GTR YM PE + S ++D++S G
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMG 193
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 31/191 (16%)
Query: 168 EVQTLSQC--KHVNLLRLLGLCNNIMNC-----------IVYEYMCNGSLYDRLARVNNT 214
EVQ L + K V++LR + NI+ +V++ M G L+D L
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 215 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSE 273
++ K L V ALH L+ I+HRD+K N+LLD++ KL DFG ++
Sbjct: 122 SEKETRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 274 TSNMKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGVILLELLTGMKPIDD 326
+++ + GT Y+ PE + C + + D++S GVI+ LL G P
Sbjct: 177 GEKLRS-----VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 327 NNTILYYYLVV 337
+L +++
Sbjct: 232 RKQMLMLRMIM 242
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETS 510
L + I + E + LH L+ I+HRD+K N+LLD++ KL DFG ++
Sbjct: 121 LSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGAQIKTQHITNVDIADRE 563
+++ + GT Y+ PE + C + + D++S G + T + R+
Sbjct: 179 KLRS-----VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 564 RYYSLQTMLPGHHE 577
+ L+ ++ G+++
Sbjct: 234 QMLMLRMIMSGNYQ 247
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 32 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 81
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 138
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+DE ++ DFG K + T L GT
Sbjct: 139 LTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR------TWXLCGTPE 190
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 242
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+DE ++ DFG K + T L
Sbjct: 134 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR------TWXL 185
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 245
Query: 574 GHHEGD 579
H D
Sbjct: 246 SHFSSD 251
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 54/243 (22%)
Query: 117 LGEGQFGTVYYGKLKNGME---IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
LG+G FG V K +N ++ A+K + TE + IL +EV L+
Sbjct: 14 LGQGAFGQVV--KARNALDSRYYAIKKIRH-----------TEEKLSTIL---SEVMLLA 57
Query: 174 QCKHVNLLRLLGLCNNIMNC--------------IVYEYMCNGSLYDRLARVNNTPPLDS 219
H ++R N I EY NG+LYD + N D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
R + + EAL Y+HS + IIHRD+K N+ +DE+ K+GDFG+ K + + ++
Sbjct: 118 YWR--LFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 279 TMYTENL----------TGTRPYMPPEAMH--CQISTKTDVFSYGVILLELL----TGMK 322
+ ++NL GT Y+ E + + K D++S G+I E++ TGM+
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGME 233
Query: 323 PID 325
++
Sbjct: 234 RVN 236
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
+ EAL Y+HS + IIHRD+K N+ +DE+ K+GDFG+ K + + ++ + ++NL G
Sbjct: 125 ILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 523 T 523
+
Sbjct: 183 S 183
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 72
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 130
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG K+ K + E +
Sbjct: 131 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 233
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 234 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK 277
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG K+ K + E
Sbjct: 128 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVP 184
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTV 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V EYM G L + ++ N P K Y+ V AL +HS+ +IHRDVK N+
Sbjct: 152 MVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAE--VVLALDAIHSMG--LIHRDVKPDNM 205
Query: 254 LLDENFVPKLGDFGI-VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-----ISTKTDV 307
LLD++ KL DFG +KM ET ++ + GT Y+ PE + Q + D
Sbjct: 206 LLDKHGHLKLADFGTCMKMDETG---MVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 308 FSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLIGIVF 367
+S GV L E+L G P ++ + Y +++ + + D E + H + LI
Sbjct: 263 WSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISK----HAKNLI---- 314
Query: 368 EKCCVFEKDKRASM-RDIVDLLSKSMFVCNSLAN 400
C F D+ + R+ V+ + + F N N
Sbjct: 315 ---CAFLTDREVRLGRNGVEEIKQHPFFKNDQWN 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETSNVKTMYTENLTG 522
V AL +HS+ +IHRDVK N+LLD++ KL DFG +KM ET V + + G
Sbjct: 183 VVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV---HCDTAVG 237
Query: 523 TRPYMPPEAMHCQ 535
T Y+ PE + Q
Sbjct: 238 TPDYISPEVLKSQ 250
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 115
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 172
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + + T L GT
Sbjct: 173 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTLCGTPE 224
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + + T L
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTL 219
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 220 CGTPEYLAPE 229
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 81 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 135
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MK GT Y+ PE + D +
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 232
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K S+ TM + GT
Sbjct: 114 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATM--KXFCGT 168
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 169 PEYLAPEVL 177
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLAR-VNNTPPLDSNKR 222
+EV L + KH N++R + N IV EY G L + + LD
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 223 YSIALGVAEALHYLHSLSK---PIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ + AL H S ++HRD+K ANV LD KLGDFG+ ++ N
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDE 170
Query: 280 MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPI 324
+ + GT YM PE M + K+D++S G +L EL M P
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM-HCQI 536
++HRD+K ANV LD KLGDFG+ ++ N + + GT YM PE M
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI---LNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 537 STKTDVFSYG 546
+ K+D++S G
Sbjct: 194 NEKSDIWSLG 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 117 LGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
LGEG FG VY G N + +AVKT + +EA + +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI------------M 63
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H ++++L+G+ I+ E G L L R N+ + + YS L + +A
Sbjct: 64 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS--LQICKA 121
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL S++ +HRD+ N+L+ KLGDFG+ + E + L +M
Sbjct: 122 MAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK--WM 177
Query: 293 PPEAMHC-QISTKTDVFSYGVILLELLT-GMKPI 324
PE+++ + +T +DV+ + V + E+L+ G +P
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+L + +A+ YL S++ +HRD+ N+L+ KLGDFG+ + E + L
Sbjct: 115 SLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 172
Query: 521 TGTRPYMPPEAMHC-QISTKTDVFSYGA 547
+M PE+++ + +T +DV+ +
Sbjct: 173 PIK--WMSPESINFRRFTTASDVWMFAV 198
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 168 EVQTLSQC--KHVNLLRLLGLCNNIMNC-----------IVYEYMCNGSLYDRLARVNNT 214
EVQ L + K V++LR + NI+ +V++ M G L+D L
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 215 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSE 273
++ K L V ALH L+ I+HRD+K N+LLD++ KL DFG ++
Sbjct: 122 SEKETRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 274 TSNMKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGVILLELLTGMKPIDD 326
++ + GT Y+ PE + C + + D++S GVI+ LL G P
Sbjct: 177 GEKLR-----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 327 NNTILYYYLVV 337
+L +++
Sbjct: 232 RKQMLMLRMIM 242
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETS 510
L + I + E + LH L+ I+HRD+K N+LLD++ KL DFG ++
Sbjct: 121 LSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGAQIKTQHITNVDIADRE 563
++ + GT Y+ PE + C + + D++S G + T + R+
Sbjct: 179 KLR-----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 564 RYYSLQTMLPGHHE 577
+ L+ ++ G+++
Sbjct: 234 QMLMLRMIMSGNYQ 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 86 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 140
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MK GT Y+ PE + D +
Sbjct: 141 LMLDKDGHIKITDFGLCKEGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 196 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 237
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K S+ TM + GT
Sbjct: 119 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATM--KXFCGT 173
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 174 PEYLAPEVL 182
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 168 EVQTLSQC--KHVNLLRLLGLCNNIMNC-----------IVYEYMCNGSLYDRLARVNNT 214
EVQ L + K V++LR + NI+ +V++ M G L+D L
Sbjct: 49 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 108
Query: 215 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSE 273
++ K L V ALH L+ I+HRD+K N+LLD++ KL DFG ++
Sbjct: 109 SEKETRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
Query: 274 TSNMKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGVILLELLTGMKPIDD 326
++ + GT Y+ PE + C + + D++S GVI+ LL G P
Sbjct: 164 GEKLR-----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
Query: 327 NNTILYYYLVV 337
+L +++
Sbjct: 219 RKQMLMLRMIM 229
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETS 510
L + I + E + LH L+ I+HRD+K N+LLD++ KL DFG ++
Sbjct: 108 LSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGAQIKTQHITNVDIADRE 563
++ + GT Y+ PE + C + + D++S G + T + R+
Sbjct: 166 KLR-----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
Query: 564 RYYSLQTMLPGHHE 577
+ L+ ++ G+++
Sbjct: 221 QMLMLRMIMSGNYQ 234
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G++G V+ G + G +AVK E E+ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS--------------WFRETELYNTVMLR 60
Query: 177 HVNLLRLLG-----LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + ++ ++ Y GSLYD L LD+ I L +A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIAS 116
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKM-SETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ M S+++N +
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 285 LTGTRPYMPPEAMHCQIST-------KTDVFSYGVILLELLTGM 321
GT+ YM PE + I + D++++G++L E+ M
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 452 LDSNKRYSIALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVK 505
LD+ I L +A L +LH + KP I HRD+KS N+L+ +N + D G+
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
Query: 506 M-SETSNVKTMYTENLTGTRPYMPPEAMHCQIST-------KTDVFSYG 546
M S+++N + GT+ YM PE + I + D++++G
Sbjct: 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G++G V+ G + G +AVK E E+ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS--------------WFRETELYNTVMLR 60
Query: 177 HVNLLRLLG-----LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + ++ ++ Y GSLYD L LD+ I L +A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIAS 116
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKM-SETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ M S+++N +
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 285 LTGTRPYMPPEAMHCQIST-------KTDVFSYGVILLELLTGM 321
GT+ YM PE + I + D++++G++L E+ M
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 452 LDSNKRYSIALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVK 505
LD+ I L +A L +LH + KP I HRD+KS N+L+ +N + D G+
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161
Query: 506 M-SETSNVKTMYTENLTGTRPYMPPEAMHCQIST-------KTDVFSYG 546
M S+++N + GT+ YM PE + I + D++++G
Sbjct: 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLAGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 81 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 135
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MK GT Y+ PE + D +
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 232
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K S+ TM + GT
Sbjct: 114 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATM--KXFCGT 168
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 169 PEYLAPEVL 177
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 193 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 252
C V EY G L+ L+R + R+ A + AL YLHS + +++RD+K N
Sbjct: 81 CFVMEYANGGELFFHLSRERVFT--EERARFYGA-EIVSALEYLHS--RDVVYRDIKLEN 135
Query: 253 VLLDENFVPKLGDFGIVK--MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFS 309
++LD++ K+ DFG+ K +S+ + MK GT Y+ PE + D +
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 310 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 351
GV++ E++ G P + + + L++ +E+ L EA
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 232
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ AL YLHS + +++RD+K N++LD++ K+ DFG+ K S+ TM + GT
Sbjct: 114 IVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATM--KXFCGT 168
Query: 524 RPYMPPEAM 532
Y+ PE +
Sbjct: 169 PEYLAPEVL 177
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Query: 116 KLGEGQFGTVYYGKLKNG-MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG G +G V K KNG E A+K ++ + NE+ L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++L + + +V E+ G L++++ N D +I + +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII---NRHKFDECDAANIMKQILSGI 159
Query: 234 HYLHSLSKPIIHRDVKSANVLLDEN---FVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLH + I+HRD+K N+LL+ K+ DFG+ K + GT
Sbjct: 160 CYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS----KDYKLRDRLGTAY 213
Query: 291 YMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + + + K DV+S GVI+ LL G P N
Sbjct: 214 YIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 443 LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN---FVPKLG 499
++ N D +I + + YLH + I+HRD+K N+LL+ K+
Sbjct: 134 FEQIINRHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIV 191
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGA 547
DFG+ K + GT Y+ PE + + + K DV+S G
Sbjct: 192 DFGLSSFFS----KDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGV 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 74
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 132
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG K+ K + E +
Sbjct: 133 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 189
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 235
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 236 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 279
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG K+ K + E
Sbjct: 130 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVP 186
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTV 213
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 117 LGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
LGEG FG VY G N + +AVKT + +EA + +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI------------M 67
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H ++++L+G+ I+ E G L L R N+ + + YS L + +A
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS--LQICKA 125
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL S++ +HRD+ N+L+ KLGDFG+ + E + L +M
Sbjct: 126 MAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK--WM 181
Query: 293 PPEAMHC-QISTKTDVFSYGVILLELLT-GMKPI 324
PE+++ + +T +DV+ + V + E+L+ G +P
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+L + +A+ YL S++ +HRD+ N+L+ KLGDFG+ + E + Y ++
Sbjct: 119 SLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED---YYKASV 173
Query: 521 TGTR-PYMPPEAMHC-QISTKTDVFSYGA 547
T +M PE+++ + +T +DV+ +
Sbjct: 174 TRLPIKWMSPESINFRRFTTASDVWMFAV 202
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 72
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 130
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG K+ K + E +
Sbjct: 131 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 187
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 233
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 234 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 277
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG K+ K + E
Sbjct: 128 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVP 184
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTV 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 117 LGEGQFGTVYYGKLKN----GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
LGEG FG VY G N + +AVKT + +EA + +
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI------------M 79
Query: 173 SQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H ++++L+G+ I+ E G L L R N+ + + YS L + +A
Sbjct: 80 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS--LQICKA 137
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ YL S++ +HRD+ N+L+ KLGDFG+ + E + L +M
Sbjct: 138 MAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK--WM 193
Query: 293 PPEAMHC-QISTKTDVFSYGVILLELLT-GMKPI 324
PE+++ + +T +DV+ + V + E+L+ G +P
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+L + +A+ YL S++ +HRD+ N+L+ KLGDFG+ + E + L
Sbjct: 131 SLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 188
Query: 521 TGTRPYMPPEAMHC-QISTKTDVFSYGA 547
+M PE+++ + +T +DV+ +
Sbjct: 189 PIK--WMSPESINFRRFTTASDVWMFAV 214
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R +G G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ K+ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ K+ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K + E AVK + EV+ L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-----------REVELLKKL 78
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + + + IV E G L+D + + D+ + I V +
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGIT 135
Query: 235 YLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
Y+H + I+HRD+K N+LL+ ++ K+ DFG+ T + ++ GT Y
Sbjct: 136 YMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDRIGTAYY 189
Query: 292 MPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
+ PE + K DV+S GVIL LL+G P N
Sbjct: 190 IAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V + Y+H + I+HRD+K N+LL +++ K+ DFG+ T + ++
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDR 183
Query: 521 TGTRPYMPPEAMHCQISTKTDVFSYGA 547
GT Y+ PE + K DV+S G
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGV 210
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLXGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K + E AVK + EV+ L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-----------REVELLKKL 78
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + + + IV E G L+D + + D+ + I V +
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGIT 135
Query: 235 YLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
Y+H + I+HRD+K N+LL+ ++ K+ DFG+ T + ++ GT Y
Sbjct: 136 YMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDRIGTAYY 189
Query: 292 MPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
+ PE + K DV+S GVIL LL+G P N
Sbjct: 190 IAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V + Y+H + I+HRD+K N+LL +++ K+ DFG+ T + ++
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDR 183
Query: 521 TGTRPYMPPEAMHCQISTKTDVFSYGA 547
GT Y+ PE + K DV+S G
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGV 210
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 70
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 128
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG K+ K + E +
Sbjct: 129 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 231
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG K+ K + E
Sbjct: 126 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVP 182
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTV 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFA--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V +++ G +AVK ++ LLF NEV +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 204
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + + +V E++ G+L D + ++ + ++ L V +A
Sbjct: 205 YQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQA 259
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L LH+ +IHRD+KS ++LL + KL DFG ++ S + + L GT +M
Sbjct: 260 LSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRKXLVGTPYWM 314
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + + D++S G++++E++ G P
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V +AL LH+ +IHRD+KS ++LL + KL DFG ++ S + +
Sbjct: 251 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRK 305
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + + D++S G +
Sbjct: 306 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 337
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 40 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 89
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF--XEPHARF-YAAQIV 146
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 147 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 198
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 250
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 142 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 193
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 117 LGEGQFGTVYYG-KLKNG--MEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
LG G FGTVY G + G ++I V +E + A IL +E ++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT-------SPKANKEIL---DEAYVMA 106
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+ ++ RLLG+C ++ + M G L D + + + S + + +A+ +
Sbjct: 107 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGM 164
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +M
Sbjct: 165 NYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKWMA 221
Query: 294 PEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD-KE 350
E++ +I T ++DV+SYGV + EL+T G KP D +P E+ E
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSILE 267
Query: 351 AGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 268 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 309
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 160 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 216
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTV 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG+G FG V K + E AVK + IL EV+ L +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST--------IL---REVELLKKL 78
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
H N+++L + + + IV E G L+D + + D+ + I V +
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGIT 135
Query: 235 YLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVK-MSETSNMKTMYTENLTGTRP 290
Y+H + I+HRD+K N+LL+ ++ K+ DFG+ + + MK + GT
Sbjct: 136 YMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK-----DRIGTAY 188
Query: 291 YMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
Y+ PE + K DV+S GVIL LL+G P
Sbjct: 189 YIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 456 KRYS------IALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKM 506
KR+S I V + Y+H + I+HRD+K N+LL +++ K+ DFG+
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGL--- 170
Query: 507 SETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGA 547
T + ++ GT Y+ PE + K DV+S G
Sbjct: 171 -STCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGV 210
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF--XEPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF--XEPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V +++ G +AVK ++ LLF NEV +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 82
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + + +V E++ G+L D + ++ + ++ L V +A
Sbjct: 83 YQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQA 137
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L LH+ + +IHRD+KS ++LL + KL DFG ++ S + + L GT +M
Sbjct: 138 LSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRKXLVGTPYWM 192
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + + D++S G++++E++ G P
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V +AL LH+ + +IHRD+KS ++LL + KL DFG ++ S + +
Sbjct: 129 AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRK 183
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + + D++S G +
Sbjct: 184 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 215
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCK 176
+G+G++G V+ G + G +AVK E E+ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKS--------------WFRETELYNTVMLR 89
Query: 177 HVNLLRLLG-----LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+L + ++ ++ Y GSLYD L LD+ I L +A
Sbjct: 90 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIAS 145
Query: 232 ALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVKM-SETSNMKTMYTEN 284
L +LH + KP I HRD+KS N+L+ +N + D G+ M S+++N +
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 285 LTGTRPYMPPEAMHCQIST-------KTDVFSYGVILLELLTGM 321
GT+ YM PE + I + D++++G++L E+ M
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 249
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 452 LDSNKRYSIALGVAEALHYLH-----SLSKPII-HRDVKSANVLLDENFVPKLGDFGIVK 505
LD+ I L +A L +LH + KP I HRD+KS N+L+ +N + D G+
Sbjct: 131 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 190
Query: 506 M-SETSNVKTMYTENLTGTRPYMPPEAMHCQIST-------KTDVFSYG 546
M S+++N + GT+ YM PE + I + D++++G
Sbjct: 191 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 239
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
LG G FGTVY G K + +A+K L + A IL +E
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 77
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 135
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG K+ K + E +
Sbjct: 136 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 238
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG K+ K + E
Sbjct: 133 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE-KEYHAEGGKVP 189
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTV 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG G + TVY G K G+ +A+K ++ T + I E+ + +
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG------TPSTAI------REISLMKE 59
Query: 175 CKHVNLLRLLGLCNNIMN-CIVYEYMCNG-SLYDRLARVNNTP-PLDSNKRYSIALGVAE 231
KH N++RL + + +V+E+M N Y V NTP L+ N + +
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM---------SETSNMKTMYT 282
L + H I+HRD+K N+L+++ KLGDFG+ + SE +
Sbjct: 120 GLAFCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 283 ENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
+ L G+R Y ST D++S G IL E++TG KP+
Sbjct: 178 DVLMGSRTY----------STSIDIWSCGCILAEMITG-KPL 208
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 446 VNNTP-PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 504
V NTP L+ N + + L + H I+HRD+K N+L+++ KLGDFG+
Sbjct: 98 VGNTPRGLELNLVKYFQWQLLQGLAFCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Query: 505 KM------SETSNVKTMY---TENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ + +S V T++ + L G+R Y ST D++S G
Sbjct: 156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY----------STSIDIWSCG 196
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF--XEPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 225 IALGVAEALHYLHS-LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTE 283
IA+ + +AL +LHS LS +IHRDVK +NVL++ K+ DFGI S KT+
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID-- 213
Query: 284 NLTGTRPYMPPEAMHCQI-----STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
G +PYM PE ++ ++ S K+D++S G+ ++EL P D T V
Sbjct: 214 --AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
Query: 339 QEVPVREVLDKEAGEW 354
+E + DK + E+
Sbjct: 272 EEPSPQLPADKFSAEF 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 12/93 (12%)
Query: 460 IALGVAEALHYLHS-LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
IA+ + +AL +LHS LS +IHRDVK +NVL++ K+ DFGI S KT+
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID-- 213
Query: 519 NLTGTRPYMPPEAMHCQI-----STKTDVFSYG 546
G +PYM PE ++ ++ S K+D++S G
Sbjct: 214 --AGCKPYMAPERINPELNQKGYSVKSDIWSLG 244
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 115
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF--XEPHARF-YAAQIV 172
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 173 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 224
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 276
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 219
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 220 CGTPEYLAPE 229
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V +++ G +AVK ++ LLF NEV +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 84
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + + +V E++ G+L D + ++ + ++ L V +A
Sbjct: 85 YQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQA 139
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L LH+ + +IHRD+KS ++LL + KL DFG ++ S + + L GT +M
Sbjct: 140 LSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRKXLVGTPYWM 194
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + + D++S G++++E++ G P
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V +AL LH+ + +IHRD+KS ++LL + KL DFG ++ S + +
Sbjct: 131 AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRK 185
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + + D++S G +
Sbjct: 186 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V +++ G +AVK ++ LLF NEV +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 73
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + + +V E++ G+L D + ++ + ++ L V +A
Sbjct: 74 YQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQA 128
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L LH+ + +IHRD+KS ++LL + KL DFG ++ S + + L GT +M
Sbjct: 129 LSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRKXLVGTPYWM 183
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + + D++S G++++E++ G P
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V +AL LH+ + +IHRD+KS ++LL + KL DFG ++ S + +
Sbjct: 120 AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRK 174
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + + D++S G +
Sbjct: 175 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 96/242 (39%), Gaps = 42/242 (17%)
Query: 120 GQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQCKHVN 179
G+FG V+ +L N +AVK E E+ + KH N
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS--------------EREIFSTPGMKHEN 70
Query: 180 LLRLLGLCNNIMN-----CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
LL+ + N ++ + GSL D L N + N+ +A ++ L
Sbjct: 71 LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK--GNI--ITWNELCHVAETMSRGLS 126
Query: 235 YLHS--------LSKP-IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
YLH KP I HRD KS NVLL + L DFG+ E T
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK-PPGDTHGQ 185
Query: 286 TGTRPYMPPEAMHCQISTKTDVF------SYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
GTR YM PE + I+ + D F + G++L EL++ K D + Y L E+
Sbjct: 186 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD--GPVDEYMLPFEE 243
Query: 340 EV 341
E+
Sbjct: 244 EI 245
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 455 NKRYSIALGVAEALHYLHS--------LSKP-IIHRDVKSANVLLDENFVPKLGDFGIVK 505
N+ +A ++ L YLH KP I HRD KS NVLL + L DFG+
Sbjct: 112 NELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171
Query: 506 MSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVF 543
E T GTR YM PE + I+ + D F
Sbjct: 172 RFEPGKPPG-DTHGQVGTRRYMAPEVLEGAINFQRDAF 208
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 31 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 80
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 137
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 138 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWTLCGTPE 189
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 241
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 133 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWTL 184
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 244
Query: 574 GHHEGD 579
H D
Sbjct: 245 SHFSSD 250
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V +++ G +AVK ++ LLF NEV +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 77
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + + +V E++ G+L D + ++ + ++ L V +A
Sbjct: 78 YQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQA 132
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L LH+ + +IHRD+KS ++LL + KL DFG ++ S + + L GT +M
Sbjct: 133 LSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRKXLVGTPYWM 187
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + + D++S G++++E++ G P
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V +AL LH+ + +IHRD+KS ++LL + KL DFG ++ S + +
Sbjct: 124 AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRK 178
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + + D++S G +
Sbjct: 179 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG FG V G ++A+K + E E+ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR----------IEREISYLRLL 61
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H ++++L + + I V EY N L+D + + + ++ + + + A+
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVE 117
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+ Y P
Sbjct: 118 YCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAP 171
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + ++ + DV+S GVIL +L P DD +
Sbjct: 172 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+
Sbjct: 112 IISAVEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGS 165
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGA 547
Y PE + ++ + DV+S G
Sbjct: 166 PNYAAPEVISGKLYAGPEVDVWSCGV 191
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
L G FGTVY G K + +A+K L + A IL +E
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 70
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 128
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 129 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 185
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 231
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 275
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 126 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 182
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTV 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
L G FGTVY G K + +A+K L + A IL +E
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 77
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 135
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 136 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 238
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 133 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 189
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTV 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG+ K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG+ K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWTLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWTL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 574 GHHEGD 579
H D
Sbjct: 260 SHFSSD 265
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
++LG+G FG+V Y L + G +AVK L+ F+ E+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-------------FQREI 62
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
Q L +++ G+ +V EY+ +G L D L R LD+++ +
Sbjct: 63 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYS 120
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL S + +HRD+ + N+L++ K+ DFG+ K+ K Y
Sbjct: 121 SQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVREP 176
Query: 287 GTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
G P + PE++ I S ++DV+S+GV+L EL T
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD+++ + + + + YL S + +HRD+ + N+L++ K+ DFG+ K+
Sbjct: 111 LDASRLLLYSSQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD- 167
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
K Y G P + PE++ I S ++DV+S+G
Sbjct: 168 -KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG G V +++ G +AVK ++ LLF NEV +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE------------LLF-NEVVIMRD 127
Query: 175 CKHVNLLRLLG--LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
+H N++ + L + + +V E++ G+L D + ++ + ++ L V +A
Sbjct: 128 YQHENVVEMYNSYLVGDEL-WVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQA 182
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L LH+ + +IHRD+KS ++LL + KL DFG ++ S + + L GT +M
Sbjct: 183 LSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRKXLVGTPYWM 237
Query: 293 PPEAM-HCQISTKTDVFSYGVILLELLTGMKP 323
PE + + D++S G++++E++ G P
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
++ L V +AL LH+ + +IHRD+KS ++LL + KL DFG ++ S + +
Sbjct: 174 AVCLAVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSK-EVPRRK 228
Query: 519 NLTGTRPYMPPEAM-HCQISTKTDVFSYGAQI 549
L GT +M PE + + D++S G +
Sbjct: 229 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 260
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG FG V G ++A+K + E E+ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR----------IEREISYLRLL 70
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H ++++L + + I V EY N L+D + + + ++ + + + A+
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVE 126
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+ Y P
Sbjct: 127 YCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAP 180
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + ++ + DV+S GVIL +L P DD +
Sbjct: 181 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+
Sbjct: 121 IISAVEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGS 174
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGA 547
Y PE + ++ + DV+S G
Sbjct: 175 PNYAAPEVISGKLYAGPEVDVWSCGV 200
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 52/245 (21%)
Query: 110 YPRR----GNKLGEGQFG-----TVYYGKLKNG-MEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR+ G LGEG+FG T ++ K + G +AVK L+ + + +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---------SPSEL 70
Query: 160 IPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPP-- 216
+L +E L Q H ++++L G C+ + + EY GSL L P
Sbjct: 71 RDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 217 -----------LDSNKRYSIALG--------VAEALHYLHSLSKPIIHRDVKSANVLLDE 257
LD ++ +G +++ + YL + ++HRD+ + N+L+ E
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAE 185
Query: 258 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYGVIL 314
K+ DFG +S + Y + G P +M E++ I +T++DV+S+GV+L
Sbjct: 186 GRKMKISDFG---LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 315 LELLT 319
E++T
Sbjct: 243 WEIVT 247
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
S A +++ + YL + ++HRD+ + N+L+ E K+ DFG +S + Y +
Sbjct: 154 SFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFG---LSRDVYEEDSYVK 208
Query: 519 NLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
G P +M E++ I +T++DV+S+G
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG FG V G ++A+K + E E+ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR----------IEREISYLRLL 71
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H ++++L + + I V EY N L+D + + + ++ + + + A+
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVE 127
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+ Y P
Sbjct: 128 YCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAP 181
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + ++ + DV+S GVIL +L P DD +
Sbjct: 182 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+
Sbjct: 122 IISAVEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGS 175
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGA 547
Y PE + ++ + DV+S G
Sbjct: 176 PNYAAPEVISGKLYAGPEVDVWSCGV 201
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 574 GHHEGD 579
H D
Sbjct: 260 SHFSSD 265
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF--XEPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF--XEPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 574 GHHEGD 579
H D
Sbjct: 260 SHFSSD 265
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF--XEPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF--XEPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 117 LGEGQFGTVYYGKL-----KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
L G FGTVY G K + +A+K L + A IL +E
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEIL---DEAYV 77
Query: 172 LSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
++ + ++ RLLG+C ++ + M G L D + + + S + + +A+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAK 135
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E +
Sbjct: 136 GMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVPIKW 192
Query: 292 MPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD- 348
M E++ +I T ++DV+SYGV + EL+T G KP D +P E+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG--------------IPASEISSI 238
Query: 349 KEAGE-WNETHVETL-IGIVFEKCCVFEKDKRASMRDIVDLLSK 390
E GE + + T+ + ++ KC + + D R R+++ SK
Sbjct: 239 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 282
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+A+ ++YL + ++HRD+ + NVL+ K+ DFG+ K+ K + E
Sbjct: 133 IAKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE-KEYHAEGGKVP 189
Query: 524 RPYMPPEAMHCQIST-KTDVFSYGAQI 549
+M E++ +I T ++DV+SYG +
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTV 216
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 72 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 128
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 129 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 184
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 185 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 229
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 101 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 153
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 154 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 209
Query: 546 GA 547
G
Sbjct: 210 GV 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
++LG+G FG+V Y L + G +AVK L+ F+ E+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-------------FQREI 63
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
Q L +++ G+ +V EY+ +G L D L R LD+++ +
Sbjct: 64 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYS 121
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL S + +HRD+ + N+L++ K+ DFG+ K+ K Y
Sbjct: 122 SQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVREP 177
Query: 287 GTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
G P + PE++ I S ++DV+S+GV+L EL T
Sbjct: 178 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD+++ + + + + YL S + +HRD+ + N+L++ K+ DFG+ K+
Sbjct: 112 LDASRLLLYSSQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD- 168
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
K Y G P + PE++ I S ++DV+S+G
Sbjct: 169 -KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
++LG+G FG+V Y L + G +AVK L+ F+ E+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-------------FQREI 75
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
Q L +++ G+ +V EY+ +G L D L R LD+++ +
Sbjct: 76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYS 133
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL S + +HRD+ + N+L++ K+ DFG+ K+ K Y
Sbjct: 134 SQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD--KDYYVVREP 189
Query: 287 GTRP--YMPPEAMHCQI-STKTDVFSYGVILLELLT 319
G P + PE++ I S ++DV+S+GV+L EL T
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD+++ + + + + YL S + +HRD+ + N+L++ K+ DFG+ K+
Sbjct: 124 LDASRLLLYSSQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD- 180
Query: 512 VKTMYTENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
K Y G P + PE++ I S ++DV+S+G
Sbjct: 181 -KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 82 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 138
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 139 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 194
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 195 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 239
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 111 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 163
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 164 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 219
Query: 546 G 546
G
Sbjct: 220 G 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 73 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 129
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 130 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 185
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 186 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 230
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 102 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 154
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 155 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 210
Query: 546 GA 547
G
Sbjct: 211 GV 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LGEG FG V G ++A+K + E E+ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR----------IEREISYLRLL 65
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H ++++L + + I V EY N L+D + + + ++ + + + A+
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVE 121
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+ Y P
Sbjct: 122 YCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAP 175
Query: 295 EAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNN 328
E + ++ + DV+S GVIL +L P DD +
Sbjct: 176 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ A+ Y H I+HRD+K N+LLDE+ K+ DFG+ + N + + G+
Sbjct: 116 IISAVEYCHR--HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGS 169
Query: 524 RPYMPPEAMHCQI--STKTDVFSYGA 547
Y PE + ++ + DV+S G
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGV 195
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 74 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 130
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 131 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 186
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 187 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 231
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 103 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 155
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 156 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 211
Query: 546 GA 547
G
Sbjct: 212 GV 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 68 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 124
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 125 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 180
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 181 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 97 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 149
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 150 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 205
Query: 546 GA 547
G
Sbjct: 206 GV 207
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 87
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 144
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 145 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 196
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 248
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 140 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 191
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251
Query: 574 GHHEGD 579
H D
Sbjct: 252 SHFSSD 257
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 112 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 168
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 169 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 224
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 225 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 269
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 141 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 193
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 194 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 249
Query: 546 GA 547
G
Sbjct: 250 GV 251
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ ++ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 48/243 (19%)
Query: 110 YPRR----GNKLGEGQFG-----TVYYGKLKNG-MEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR+ G LGEG+FG T ++ K + G +AVK L+ + + +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---------SPSEL 70
Query: 160 IPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPP-- 216
+L +E L Q H ++++L G C+ + + EY GSL L P
Sbjct: 71 RDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 217 -----------LDSNKRYSIALG--------VAEALHYLHSLSKPIIHRDVKSANVLLDE 257
LD ++ +G +++ + YL +S ++HRD+ + N+L+ E
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAE 185
Query: 258 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLE 316
K+ DFG+ + + ++ + +M E++ I +T++DV+S+GV+L E
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 317 LLT 319
++T
Sbjct: 245 IVT 247
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMY 516
S A +++ + YL +S ++HRD+ + N+L+ E K+ DFG+ + E S VK
Sbjct: 154 SFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS- 210
Query: 517 TENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
G P +M E++ I +T++DV+S+G
Sbjct: 211 ----QGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 68 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 124
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 125 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 180
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 181 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 97 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 149
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 150 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 205
Query: 546 GA 547
G
Sbjct: 206 GV 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 87
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF--XEPHARF-YAAQIV 144
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 145 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 196
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 248
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 140 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 191
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251
Query: 574 GHHEGD 579
H D
Sbjct: 252 SHFSSD 257
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 67 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 123
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 124 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 179
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 180 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 224
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 96 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 148
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 149 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 204
Query: 546 GA 547
G
Sbjct: 205 GV 206
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 574 GHHEGD 579
H D
Sbjct: 260 SHFSSD 265
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 66 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 122
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 123 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 178
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 179 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 95 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 147
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 148 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 203
Query: 546 GA 547
G
Sbjct: 204 GV 205
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 118 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 174
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 175 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 230
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 231 YTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 275
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 147 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 199
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D++S
Sbjct: 200 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDMWSL 255
Query: 546 GA 547
G
Sbjct: 256 GV 257
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 574 GHHEGD 579
H D
Sbjct: 260 SHFSSD 265
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQIKTQ------HITNVDIADRERYYSLQTMLP 573
GT Y+ PE + + K D ++ G I + I E+ S + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 574 GHHEGD 579
H D
Sbjct: 259 SHFSSD 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 66 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 115
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 172
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 173 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 224
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 168 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 219
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L +L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 54/243 (22%)
Query: 117 LGEGQFGTVYYGKLKNGME---IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
LG+G FG V K +N ++ A+K + TE + IL +EV L+
Sbjct: 14 LGQGAFGQVV--KARNALDSRYYAIKKIRH-----------TEEKLSTIL---SEVMLLA 57
Query: 174 QCKHVNLLRLLGLCNNIMNC--------------IVYEYMCNGSLYDRLARVNNTPPLDS 219
H ++R N I EY N +LYD + N D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
R + + EAL Y+HS + IIHRD+K N+ +DE+ K+GDFG+ K + + ++
Sbjct: 118 YWR--LFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 279 TMYTENL----------TGTRPYMPPEAMH--CQISTKTDVFSYGVILLELL----TGMK 322
+ ++NL GT Y+ E + + K D++S G+I E++ TGM+
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGME 233
Query: 323 PID 325
++
Sbjct: 234 RVN 236
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
+ EAL Y+HS + IIHRD+K N+ +DE+ K+GDFG+ K + + ++ + ++NL G
Sbjct: 125 ILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 523 T 523
+
Sbjct: 183 S 183
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG V K+KN I A+K L + A E +V C
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEM--------LKRAETACFREERDVLVNGDC 133
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA-EALH 234
+ + L N + +V +Y G L L++ + P D + Y + +A +++H
Sbjct: 134 QWITALHYAFQDENHLY-LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG-IVKMSETSNMKTMYTENLTGTRPYMP 293
LH +HRD+K NVLLD N +L DFG +KM++ +++ GT Y+
Sbjct: 193 QLH-----YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYIS 244
Query: 294 PEAMHC------QISTKTDVFSYGVILLELLTGMKPI 324
PE + + + D +S GV + E+L G P
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 443 LARVNNTPPLDSNKRYSIALGVA-EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 501
L++ + P D + Y + +A +++H LH +HRD+K NVLLD N +L DF
Sbjct: 165 LSKFEDKLPEDMARFYIGEMVLAIDSIHQLH-----YVHRDIKPDNVLLDVNGHIRLADF 219
Query: 502 G-IVKMSETSNVKTMYTENLTGTRPYMPPEAMHC 534
G +KM++ V++ GT Y+ PE +
Sbjct: 220 GSCLKMNDDGTVQSSVA---VGTPDYISPEILQA 250
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L +L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 95
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L +L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRF--XEPHARF-YAAQIV 152
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ K+ DFG K + T L GT
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXLCGTPE 204
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ K+ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V EY G ++ L R+ + + R+ A + YLHSL +I+RD+K N+
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENL 173
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGV 312
L+D+ K+ DFG K + T L GT Y+ PE + + K D ++ GV
Sbjct: 174 LIDQQGYIKVADFGFAKRVKGR------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 313 ILLELLTGMKPIDDNNTILYYYLVVEQEV 341
++ E+ G P + I Y +V +V
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKV 256
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ K+ DFG K + T L
Sbjct: 148 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXL 199
Query: 521 TGTRPYMPPE 530
GT Y+ PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
ENE+ L + KH N++ L + + + +V + + G L+DR+ D++
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS--- 109
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTM 280
+ V A+ YLH I+HRD+K N+L +EN + DFG+ KM + M T
Sbjct: 110 LVIQQVLSAVKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA 167
Query: 281 YTENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPI 324
GT Y+ PE + + +K D +S GVI LL G P
Sbjct: 168 -----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
V A+ YLH I+HRD+K N+L +EN + DFG+ KM + + T
Sbjct: 115 VLSAVKYLHE--NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA----- 167
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + +K D +S G
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIG 194
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 28 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 87
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 88 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 132
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 133 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 183
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
Query: 339 QEV 341
Q V
Sbjct: 244 QRV 246
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 104 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 158
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 159 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 200
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ ++ DFG+ K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ ++ DFG+ K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 45/223 (20%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +G VY K G +A+K + E IP E+ L +
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLD----------AEDEGIPSTAI-REISLLKEL 76
Query: 176 KHVNLLRLLGLCNNIMNCI--VYEYMCNGSLYDRLARVNNTPPLDSNKR---YSIALGVA 230
H N++ L+ + ++ C+ V+E+M ++ N T DS + Y + GVA
Sbjct: 77 HHPNIVSLIDVIHS-ERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM------SETSNMKTMY--- 281
H I+HRD+K N+L++ + KL DFG+ + S T + T++
Sbjct: 134 ------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 282 TENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
+ L G++ Y ST D++S G I E++TG KP+
Sbjct: 188 PDVLMGSKKY----------STSVDIWSIGCIFAEMITG-KPL 219
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 39/150 (26%)
Query: 419 ELHYTGIPVIILDTGETKQCQ--LFKLARVNNTPPLDSNKR-----------YSIALGVA 465
ELH+ I V ++D +++C +F+ + LD NK Y + GVA
Sbjct: 75 ELHHPNI-VSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM------SETSNVKTMY--- 516
H I+HRD+K N+L++ + KL DFG+ + S T V T++
Sbjct: 134 ------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 517 TENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ L G++ Y ST D++S G
Sbjct: 188 PDVLMGSKKY----------STSVDIWSIG 207
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG V K+KN I A+K L + A E +V C
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEM--------LKRAETACFREERDVLVNGDC 149
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA-EALH 234
+ + L N + +V +Y G L L++ + P D + Y + +A +++H
Sbjct: 150 QWITALHYAFQDENHLY-LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG-IVKMSETSNMKTMYTENLTGTRPYMP 293
LH +HRD+K NVLLD N +L DFG +KM++ +++ GT Y+
Sbjct: 209 QLH-----YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYIS 260
Query: 294 PEAMHC------QISTKTDVFSYGVILLELLTGMKPI 324
PE + + + D +S GV + E+L G P
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 443 LARVNNTPPLDSNKRYSIALGVA-EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 501
L++ + P D + Y + +A +++H LH +HRD+K NVLLD N +L DF
Sbjct: 181 LSKFEDKLPEDMARFYIGEMVLAIDSIHQLH-----YVHRDIKPDNVLLDVNGHIRLADF 235
Query: 502 G-IVKMSETSNVKTMYTENLTGTRPYMPPEAMHC 534
G +KM++ V++ GT Y+ PE +
Sbjct: 236 GSCLKMNDDGTVQSSVA---VGTPDYISPEILQA 266
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ + + +AL+YL +IHRDVK +N+LLDE KL DFGI K +
Sbjct: 129 MTVAIVKALYYLKE-KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK----DR 183
Query: 285 LTGTRPYMPPEAMHCQISTK------TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
G YM PE + TK DV+S G+ L+EL TG P + T V
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL 243
Query: 339 QEVP 342
QE P
Sbjct: 244 QEEP 247
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
+ + + +AL+YL +IHRDVK +N+LLDE KL DFGI K +
Sbjct: 129 MTVAIVKALYYLKE-KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK----DR 183
Query: 520 LTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYS------------ 567
G YM PE + TK D + A + + I+ V++A + Y
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPD-YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
Query: 568 LQ---TMLPGH--HEGDHVSISNHSTNNSH 592
LQ +LPGH GD S H
Sbjct: 243 LQEEPPLLPGHMGFSGDFQSFVKDCLTKDH 272
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 13 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 72
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 73 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 117
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 118 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 168
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
Query: 339 QEV 341
Q V
Sbjct: 229 QRV 231
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 89 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 143
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 144 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 185
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 17/232 (7%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 13 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 72
Query: 173 SQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
S ++RLL + ++ E M + D + L S V E
Sbjct: 73 S-----GVIRLLDWFERPDSFVLILERM--EPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
A+ + H+ ++HRD+K N+L+D N G+ ++ + +K + GTR Y
Sbjct: 126 AVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVY 179
Query: 292 MPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
PPE + H V+S G++L +++ G P + + I+ + Q V
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 231
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 89 VLILERMEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 143
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 144 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 185
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 28 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 87
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 88 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 132
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 133 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 183
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
Query: 339 QEV 341
Q V
Sbjct: 244 QRV 246
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 104 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 158
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 159 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 200
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 115 NKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+KLGEG + TVY GK K +A+K + E A + EV L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---------EGAPCTAI---REVSLLK 55
Query: 174 QCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
KH N++ L + + + +V+EY+ + L L N + + K + L
Sbjct: 56 DLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQL--LRG 112
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L Y H + ++HRD+K N+L++E KL DFG+ + ++ T +N T Y
Sbjct: 113 LAYCHR--QKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYR 167
Query: 293 PPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTI 330
PP+ + ST+ D++ G I E+ TG +P+ +T+
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPLFPGSTV 206
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L Y H + ++HRD+K N+L++E KL DFG+ + ++ T +N T Y
Sbjct: 112 GLAYCHR--QKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWY 166
Query: 527 MPPEAM--HCQISTKTDVFSYG 546
PP+ + ST+ D++ G
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVG 188
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 45/223 (20%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +G VY K G +A+K + E IP E+ L +
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLD----------AEDEGIPSTAI-REISLLKEL 76
Query: 176 KHVNLLRLLGLCNNIMNCI--VYEYMCNGSLYDRLARVNNTPPLDSNKR---YSIALGVA 230
H N++ L+ + ++ C+ V+E+M ++ N T DS + Y + GVA
Sbjct: 77 HHPNIVSLIDVIHS-ERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM------SETSNMKTMY--- 281
H I+HRD+K N+L++ + KL DFG+ + S T + T++
Sbjct: 134 ------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 282 TENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
+ L G++ Y ST D++S G I E++TG KP+
Sbjct: 188 PDVLMGSKKY----------STSVDIWSIGCIFAEMITG-KPL 219
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 39/150 (26%)
Query: 419 ELHYTGIPVIILDTGETKQCQ--LFKLARVNNTPPLDSNKR-----------YSIALGVA 465
ELH+ I V ++D +++C +F+ + LD NK Y + GVA
Sbjct: 75 ELHHPNI-VSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM------SETSNVKTMY--- 516
H I+HRD+K N+L++ + KL DFG+ + S T V T++
Sbjct: 134 ------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 517 TENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ L G++ Y ST D++S G
Sbjct: 188 PDVLMGSKKY----------STSVDIWSIG 207
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 14 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 73
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 74 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 118
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 119 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 169
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
Query: 339 QEV 341
Q V
Sbjct: 230 QRV 232
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 90 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 144
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 145 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 186
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 29 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 88
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 89 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 133
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 134 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 184
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
Query: 339 QEV 341
Q V
Sbjct: 245 QRV 247
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 105 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 159
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 160 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 201
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ P + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPP 529
GT Y+ P
Sbjct: 199 CGTPEYLAP 207
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 29 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 88
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 89 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 133
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 134 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 184
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
Query: 339 QEV 341
Q V
Sbjct: 245 QRV 247
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 105 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 159
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 160 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 201
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K ++ G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+++D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
Y+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+++D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYGAQI 549
GT Y+ PE + + K D ++ G I
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 112 SQCPHI--VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQA-FTEREASEIXK 168
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET++ ++ T
Sbjct: 169 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPC 224
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D +S GVI LL G P N+ +
Sbjct: 225 YTPY--YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 141 LDGGE-----LFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN--IAHRDVKPENLL 193
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K ET++ ++ T T Y+ PE + + K+ D +S
Sbjct: 194 YTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY--YVAPEVLGPEKYDKSCDXWSL 249
Query: 546 G 546
G
Sbjct: 250 G 250
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 29 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 88
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 89 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 133
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 134 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 184
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
Query: 339 QEV 341
Q V
Sbjct: 245 QRV 247
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 105 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 159
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 160 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 201
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 115 NKLGEGQFGTV---YYGKLKN--GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
++LG+G FG+V Y L + G +AVK L+ F+ E+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-------------FQREI 59
Query: 170 QTLSQCKHVNLLRLLGLCNNIMNC---IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
Q L +++ G+ +V EY+ +G L D L R LD+++ +
Sbjct: 60 QILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYS 117
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ + + YL S + +HRD+ + N+L++ K+ DFG+ K+ + E
Sbjct: 118 SQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 287 GTRPYMPPEAMHCQI-STKTDVFSYGVILLELLT 319
+ PE++ I S ++DV+S+GV+L EL T
Sbjct: 176 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD+++ + + + + YL S + +HRD+ + N+L++ K+ DFG+ K+
Sbjct: 108 LDASRLLLYSSQICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
+ E + PE++ I S ++DV+S+G
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 201
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 14 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 73
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 74 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 118
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 119 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 169
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
Query: 339 QEV 341
Q V
Sbjct: 230 QRV 232
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 90 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 144
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 145 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 186
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 14 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 73
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 74 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 118
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 119 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 169
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
Query: 339 QEV 341
Q V
Sbjct: 230 QRV 232
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 90 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 144
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFS 544
N+L+D N G+ ++ + +K + GTR Y PPE + H V+S
Sbjct: 145 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 545 YG 546
G
Sbjct: 201 LG 202
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 101 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 145
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 146 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 196
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 256
Query: 339 QEV 341
Q V
Sbjct: 257 QRV 259
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 117 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 171
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 172 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 69 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 113
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 114 ---SFFWQVLEAVRHCHNXG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 164
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
Query: 339 QEV 341
Q V
Sbjct: 225 QRV 227
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 85 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNXG--VLHRDIKDE 139
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFS 544
N+L+D N G+ ++ + +K + GTR Y PPE + H V+S
Sbjct: 140 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 545 YG 546
G
Sbjct: 196 LG 197
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 107
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 108 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 152
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 153 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 203
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263
Query: 339 QEV 341
Q V
Sbjct: 264 QRV 266
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 124 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 178
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 179 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 220
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 12 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 71
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 72 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 116
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 117 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 167
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 168 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 227
Query: 339 QEV 341
Q V
Sbjct: 228 QRV 230
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 88 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 142
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 143 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 184
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 48/243 (19%)
Query: 110 YPRR----GNKLGEGQFG-----TVYYGKLKNG-MEIAVKTLEXXXXXXXXXXXXTEAAM 159
+PR+ G LGEG+FG T ++ K + G +AVK L+ + + +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---------SPSEL 70
Query: 160 IPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPP-- 216
+L +E L Q H ++++L G C+ + + EY GSL L P
Sbjct: 71 RDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 217 -----------LDSNKRYSIALG--------VAEALHYLHSLSKPIIHRDVKSANVLLDE 257
LD ++ +G +++ + YL + ++HRD+ + N+L+ E
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAE 185
Query: 258 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLE 316
K+ DFG+ + + ++ + +M E++ I +T++DV+S+GV+L E
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 317 LLT 319
++T
Sbjct: 245 IVT 247
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK--MSETSNVKTMY 516
S A +++ + YL + ++HRD+ + N+L+ E K+ DFG+ + E S VK
Sbjct: 154 SFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS- 210
Query: 517 TENLTGTRP--YMPPEAMHCQI-STKTDVFSYG 546
G P +M E++ I +T++DV+S+G
Sbjct: 211 ----QGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 69 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 113
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 114 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 164
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
Query: 339 QEV 341
Q V
Sbjct: 225 QRV 227
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 85 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 139
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 140 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 181
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 61 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 120
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 121 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 165
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 166 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 216
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 217 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 276
Query: 339 QEV 341
Q V
Sbjct: 277 QRV 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 137 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 191
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFS 544
N+L+D N G+ ++ + +K + GTR Y PPE + H V+S
Sbjct: 192 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 247
Query: 545 YG 546
G
Sbjct: 248 LG 249
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 36 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 95
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 96 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 140
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 141 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 191
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 192 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 251
Query: 339 QEV 341
Q V
Sbjct: 252 QRV 254
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 112 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 166
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 167 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 57/252 (22%)
Query: 117 LGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G VY G+ +K G A+K ++ E E++
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE------------------EEEIK----- 68
Query: 176 KHVNLLRLLGLCNNIMN-----------------CIVYEYMCNGSLYDRLARVNNTPPLD 218
+ +N+L+ NI +V E+ GS+ D + +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG----N 124
Query: 219 SNKRYSIALGVAEALHYLHSLSK-PIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETSN 276
+ K IA E L L L + +IHRD+K NVLL EN KL DFG+ ++ T
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184
Query: 277 MKTMYTENLTGTRPYMPPEAMHCQ------ISTKTDVFSYGVILLELLTGMKPIDDNNTI 330
+ + GT +M PE + C K+D++S G+ +E+ G P+ D + +
Sbjct: 185 RRNTF----IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
Query: 331 LYYYLVVEQEVP 342
+L+ P
Sbjct: 241 RALFLIPRNPAP 252
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 20/105 (19%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETSNVKTMYTENLTG 522
+ L +LH +IHRD+K NVLL EN KL DFG+ ++ T + + G
Sbjct: 138 ILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF----IG 191
Query: 523 TRPYMPPEAMHCQ------ISTKTDVFSYGAQIKTQHITNVDIAD 561
T +M PE + C K+D++S G IT +++A+
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLG-------ITAIEMAE 229
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 56 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 115
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 116 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 160
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 161 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 211
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
Query: 339 QEV 341
Q V
Sbjct: 272 QRV 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 132 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 186
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 187 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +GTV+ K + EI L+ + A E+ L +
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIV--ALKRVRLDDDDEGVPSSAL--------REICLLKEL 58
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
KH N++RL + ++ +V+E+ C+ L N LD S + + L
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLG 115
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
+ HS + ++HRD+K N+L++ N KL DFG+ + ++ E +T Y PP
Sbjct: 116 FCHS--RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLW--YRPP 170
Query: 295 EAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTI 330
+ + ST D++S G I EL +P+ N +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDV 208
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD S + + L + HS + ++HRD+K N+L++ N KL DFG+ +
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP- 154
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYG 546
V+ E +T Y PP+ + ST D++S G
Sbjct: 155 VRCYSAEVVTLW--YRPPDVLFGAKLYSTSIDMWSAG 189
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 56 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 115
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 116 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 160
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 161 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 211
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
Query: 339 QEV 341
Q V
Sbjct: 272 QRV 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 132 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 186
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFS 544
N+L+D N G+ ++ + +K + GTR Y PPE + H V+S
Sbjct: 187 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 545 YG 546
G
Sbjct: 243 LG 244
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 66 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 122
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K + + N T
Sbjct: 123 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT----E 176
Query: 285 LTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
T Y+ PE + + K+ D++S GVI+ LL G P N+ +
Sbjct: 177 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 95 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 147
Query: 490 LDE---NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSY 545
N + KL DFG K + + N T T Y+ PE + + K+ D++S
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLT----EPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 546 GA 547
G
Sbjct: 204 GV 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 168 EVQTLSQCKHVNLLR-------LLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
E+Q + + H N++ L L N + + EY G L L + N L
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNM 277
++ ++ AL YLH IIHRD+K N++L + + K+ D G K + +
Sbjct: 123 PIRTLLSDISSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 278 KTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDN 327
T + GT Y+ PE + + T T D +S+G + E +TG +P N
Sbjct: 181 CTEFV----GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENL 520
++ AL YLH IIHRD+K N++L + + K+ D G K + + T +
Sbjct: 131 ISSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF---- 184
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + T T D +S+G
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFG 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 168 EVQTLSQCKHVNLLR-------LLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSN 220
E+Q + + H N++ L L N + + EY G L L + N L
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNM 277
++ ++ AL YLH IIHRD+K N++L + + K+ D G K + +
Sbjct: 122 PIRTLLSDISSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 278 KTMYTENLTGTRPYMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDN 327
T + GT Y+ PE + + T T D +S+G + E +TG +P N
Sbjct: 180 CTEFV----GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENL 520
++ AL YLH IIHRD+K N++L + + K+ D G K + + T +
Sbjct: 130 ISSALRYLHE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF---- 183
Query: 521 TGTRPYMPPEAMHCQISTKT-DVFSYG 546
GT Y+ PE + + T T D +S+G
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFG 210
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 102 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 146
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 147 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 197
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 257
Query: 339 QEV 341
Q V
Sbjct: 258 QRV 260
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 118 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 172
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 173 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 214
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 101 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 145
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 146 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 196
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 256
Query: 339 QEV 341
Q V
Sbjct: 257 QRV 259
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 117 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 171
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFS 544
N+L+D N G+ ++ + +K + GTR Y PPE + H V+S
Sbjct: 172 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 545 YG 546
G
Sbjct: 228 LG 229
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 102 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 146
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 147 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 197
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 257
Query: 339 QEV 341
Q V
Sbjct: 258 QRV 260
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 118 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 172
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 173 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 83/173 (47%), Gaps = 25/173 (14%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSL-YDRLARVNNTPPLDSNKR 222
+ E KH +++ LL ++ M +V+E+M L ++ + R D+
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA------DAGFV 126
Query: 223 YSIALG------VAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGI-VKMS 272
YS A+ + EAL Y H IIHRDVK NVLL EN P KLGDFG+ +++
Sbjct: 127 YSEAVASHYMRQILEALRYCHD--NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPI 324
E+ + GT +M PE + + K DV+ GVIL LL+G P
Sbjct: 185 ESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGI-VKMSETSNVKTMYTEN 519
+ EAL Y H IIHRDVK NVLL EN P KLGDFG+ +++ E+ V
Sbjct: 139 ILEALRYCHD--NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG----G 192
Query: 520 LTGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT +M PE + + K DV+ G
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCG 220
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 102 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 146
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 147 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 197
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 257
Query: 339 QEV 341
Q V
Sbjct: 258 QRV 260
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 118 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 172
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 173 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 214
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 101 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 145
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 146 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 196
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 256
Query: 339 QEV 341
Q V
Sbjct: 257 QRV 259
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 117 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 171
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 172 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 213
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 101 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 145
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 146 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 196
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 256
Query: 339 QEV 341
Q V
Sbjct: 257 QRV 259
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 117 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 171
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 172 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 213
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 102 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 146
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 147 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 197
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 257
Query: 339 QEV 341
Q V
Sbjct: 258 QRV 260
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 118 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 172
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 173 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 45/320 (14%)
Query: 117 LGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+GEG +G V + K+ G +A+K + AM E++ L Q
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKF----LESDDDKMVKKIAM-------REIKLLKQL 81
Query: 176 KHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H NL+ LL +C +V+E++ + ++ D L N LD + +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFV-DHTILDDLELFPNG--LDYQVVQKYLFQIINGIG 138
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
+ HS + IIHRD+K N+L+ ++ V KL DFG + T ++ TR Y P
Sbjct: 139 FCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFAR---TLAAPGEVYDDEVATRWYRAP 193
Query: 295 EAM--HCQISTKTDVFSYGVILLELLTG--MKPIDDNNTILYYYLV-------------- 336
E + + DV++ G ++ E+ G + P D + LY+ ++
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253
Query: 337 ---VEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLLSKSMF 393
V V + E+ ++E E + ++ + +KC + DKR +LL F
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF---CAELLHHDFF 310
Query: 394 VCNSLANLYVGKVSSRTQEN 413
+ A + ++ + Q++
Sbjct: 311 QMDGFAERFSQELQLKVQKD 330
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 475 SKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM-- 532
S IIHRD+K N+L+ ++ V KL DFG + T ++ TR Y PE +
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFAR---TLAAPGEVYDDEVATRWYRAPELLVG 198
Query: 533 HCQISTKTDVFSYGAQI 549
+ DV++ G +
Sbjct: 199 DVKYGKAVDVWAIGCLV 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 113 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R LG G FG V K K +G A+K L+ T NE +
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----------NEKRI 94
Query: 172 LSQCKHVNLLRL-LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L L++L +N +V EY+ G ++ L R+ + + R+ A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--EPHARF-YAAQIV 151
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
YLHSL +I+RD+K N+L+D+ ++ DFG K + T L GT
Sbjct: 152 LTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPE 203
Query: 291 YMPPEAMHCQISTKT-DVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 341
+ PE + + K D ++ GV++ E+ G P + I Y +V +V
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 461 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENL 520
A + YLHSL +I+RD+K N+L+D+ ++ DFG K + T L
Sbjct: 147 AAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXL 198
Query: 521 TGTRPYMPPE 530
GT + PE
Sbjct: 199 CGTPEALAPE 208
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 114 GNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
G LG G FG+VY G ++ + + +A+K +E + ++L +
Sbjct: 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 173 SQCKHVNLLRLLGLCNNIMNCIV-----------YEYMC-NGSLYDRLARVNNTPPLDSN 220
S ++RLL + ++ ++++ G+L + LAR
Sbjct: 69 S-----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------- 113
Query: 221 KRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTM 280
S V EA+ + H+ ++HRD+K N+L+D N G+ ++ + +K
Sbjct: 114 ---SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN----RGELKLIDFGSGALLKDT 164
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ GTR Y PPE + H V+S G++L +++ G P + + I+ +
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR 224
Query: 339 QEV 341
Q V
Sbjct: 225 QRV 227
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 85 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 139
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
N+L+D N G+ ++ + +K + GTR Y PPE +
Sbjct: 140 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 181
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 115 NKLGEGQFGTVYYG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTL 172
+ LG G FG V+ K KN E+ VK ++ + + + E+ L
Sbjct: 30 SPLGSGAFGFVWTAVDKEKN-KEVVVKFIKKEKVLEDCWIEDPKLGKVTL-----EIAIL 83
Query: 173 SQCKHVNLLRLLGLCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
S+ +H N++++L + N ++ ++ GS D A ++ P LD I +
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKH---GSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
A+ YL K IIHRD+K N+++ E+F KL DFG E K YT GT
Sbjct: 141 SAVGYLRL--KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYT--FCGTIE 194
Query: 291 YMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPI 324
Y PE + + +++S GV L L+ P
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 443 LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 502
A ++ P LD I + A+ YL K IIHRD+K N+++ E+F KL DFG
Sbjct: 118 FAFIDRHPRLDEPLASYIFRQLVSAVGYLRL--KDIIHRDIKDENIVIAEDFTIKLIDFG 175
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
E K YT GT Y PE +
Sbjct: 176 SAAYLERG--KLFYT--FCGTIEYCAPEVL 201
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
V EY+ G L + R P + + R+ A ++ AL+YLH + II+RD+K NV
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNV 184
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGV 312
LLD KL D+G+ K T GT Y+ PE + + D ++ GV
Sbjct: 185 LLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 313 ILLELLTGMKPID--------DNNTILYYYLVV-EQEVPVREVLDKEAG 352
++ E++ G P D D NT Y + V+ E+++ + L +A
Sbjct: 242 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 290
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
+F + R P + + R+ A ++ AL+YLH + II+RD+K NVLLD KL
Sbjct: 141 MFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLT 195
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQ 535
D+G+ K T GT Y+ PE + +
Sbjct: 196 DYGMCKEGLRPGDT---TSTFCGTPNYIAPEILRGE 228
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 19/226 (8%)
Query: 112 RRGNKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
R G LG+G FGTV+ G +L + +++A+K + + + + L +
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL---WK 90
Query: 171 TLSQCKHVNLLRLLGL--CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALG 228
+ H ++RLL ++ + L+D + PL
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDY---ITEKGPLGEGPSRCFFGQ 147
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTENLTG 287
V A+ + HS + ++HRD+K N+L+D KL DFG S YT + G
Sbjct: 148 VVAAIQHCHS--RGVVHRDIKDENILIDLRRGCAKLIDFG----SGALLHDEPYT-DFDG 200
Query: 288 TRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTIL 331
TR Y PPE + H + V+S G++L +++ G P + + IL
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL 246
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 20/170 (11%)
Query: 427 VIILDTGETKQCQLFKLAR----------VNNTPPLDSNKRYSIALGVAEALHYLHSLSK 476
+ +LD ET++ + L R + PL V A+ + HS +
Sbjct: 101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS--R 158
Query: 477 PIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--H 533
++HRD+K N+L+D KL DFG + YT + GTR Y PPE + H
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP----YT-DFDGTRVYSPPEWISRH 213
Query: 534 CQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHVSI 583
+ V+S G + ++ + + P H D ++
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCAL 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
V EY+ G L + R P + + R+ A ++ AL+YLH + II+RD+K NV
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNV 152
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGV 312
LLD KL D+G+ K T GT Y+ PE + + D ++ GV
Sbjct: 153 LLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 313 ILLELLTGMKPID--------DNNTILYYYLVV 337
++ E++ G P D D NT Y + V+
Sbjct: 210 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
+F + R P + + R+ A ++ AL+YLH + II+RD+K NVLLD KL
Sbjct: 109 MFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLT 163
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQ 535
D+G+ K T GT Y+ PE + +
Sbjct: 164 DYGMCKEGLRPGDT---TSXFCGTPNYIAPEILRGE 196
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
V EY+ G L + R P + + R+ A ++ AL+YLH + II+RD+K NV
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNV 137
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGV 312
LLD KL D+G+ K T GT Y+ PE + + D ++ GV
Sbjct: 138 LLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 313 ILLELLTGMKPID--------DNNTILYYYLVV-EQEVPVREVLDKEAG 352
++ E++ G P D D NT Y + V+ E+++ + L +A
Sbjct: 195 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 243
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
+F + R P + + R+ A ++ AL+YLH + II+RD+K NVLLD KL
Sbjct: 94 MFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLT 148
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQ 535
D+G+ K T GT Y+ PE + +
Sbjct: 149 DYGMCKEGLRPGDT---TSXFCGTPNYIAPEILRGE 181
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 35/223 (15%)
Query: 117 LGEGQFGTVYY-GKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
LG G+FG V+ + G+++A K ++ M +NE+ ++Q
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTR-------------GMKDKEEVKNEISVMNQL 143
Query: 176 KHVNLLRLLGLC---NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H NL++L N+I+ +V EY+ G L+DR+ ++ + L + E
Sbjct: 144 DHANLIQLYDAFESKNDIV--LVMEYVDGGELFDRI--IDESYNLTELDTILFMKQICEG 199
Query: 233 LHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSE-TSNMKTMYTENLTGT 288
+ ++H + I+H D+K N+L D + K+ DFG+ + + +K + GT
Sbjct: 200 IRHMHQMY--ILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNF-----GT 251
Query: 289 RPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKP-IDDNNT 329
++ PE ++ +S TD++S GVI LL+G+ P + DN+
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA 294
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
V EY+ G L + R P + + R+ A ++ AL+YLH + II+RD+K NV
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNV 141
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGV 312
LLD KL D+G+ K T GT Y+ PE + + D ++ GV
Sbjct: 142 LLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 313 ILLELLTGMKPID--------DNNTILYYYLVV-EQEVPVREVLDKEAG 352
++ E++ G P D D NT Y + V+ E+++ + L +A
Sbjct: 199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 247
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 499
+F + R P + + R+ A ++ AL+YLH + II+RD+K NVLLD KL
Sbjct: 98 MFHMQRQRKLP--EEHARFYSA-EISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLT 152
Query: 500 DFGIVKMSETSNVKTMYTENLTGTRPYMPPEAMHCQ 535
D+G+ K T GT Y+ PE + +
Sbjct: 153 DYGMCKEGLRPGDT---TSXFCGTPNYIAPEILRGE 185
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 83
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VATRWYRA 195
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 303
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VAT 190
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVG 215
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 85
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T++ T Y TR Y
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGY----VATRWYRA 197
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T++ T Y T
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGY----VAT 192
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVG 217
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL------- 84
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
+ H+N++ LLG C +M + + N S Y R R P D K +
Sbjct: 85 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 224 -------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
+ VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR---DIY 195
Query: 277 MKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 196 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR---DIYKDPDYVRKGDAR 207
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFG 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALG-VAEALHYLHSLSKPIIHRDVKSAN 252
++ +Y+ G L+ L++ + I +G + AL +LH L II+RD+K N
Sbjct: 136 LILDYINGGELFTHLSQRERF----TEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLEN 189
Query: 253 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQIS---TKTDVFS 309
+LLD N L DFG+ K + Y + GT YM P+ + S D +S
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAY--DFCGTIEYMAPDIVRGGDSGHDKAVDWWS 247
Query: 310 YGVILLELLTGMKPI 324
GV++ ELLTG P
Sbjct: 248 LGVLMYELLTGASPF 262
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
AL +LH L II+RD+K N+LLD N L DFG+ K + Y + GT Y
Sbjct: 171 ALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY--DFCGTIEY 226
Query: 527 MPPE 530
M P+
Sbjct: 227 MAPD 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 85
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T++ T Y TR Y
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGY----VATRWYRA 197
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T++ T Y T
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGY----VAT 192
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVG 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 89
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VATRWYRA 201
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 145 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VAT 196
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 83
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VATRWYRA 195
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY----VAT 190
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVG 215
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 113 RGNKLGEGQFG-TVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
R K+GEG FG + ++G + +K + EV
Sbjct: 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-----------RREVAV 76
Query: 172 LSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L+ KH N+++ N IV +Y G L+ R+ ++ + +
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQIC 135
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
AL ++H + I+HRD+KS N+ L ++ +LGDFGI ++ N GT
Sbjct: 136 LALKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARV---LNSTVELARACIGTPY 190
Query: 291 YMPPEAMHCQ-ISTKTDVFSYGVILLELLT 319
Y+ PE + + K+D+++ G +L EL T
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCT 220
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
AL ++H + I+HRD+KS N+ L ++ +LGDFGI ++ N GT Y
Sbjct: 137 ALKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARV---LNSTVELARACIGTPYY 191
Query: 527 MPPEAMHCQ-ISTKTDVFSYG 546
+ PE + + K+D+++ G
Sbjct: 192 LSPEICENKPYNNKSDIWALG 212
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 85
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T++ T Y TR Y
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGY----VATRWYRA 197
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T++ T Y T
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGY----VAT 192
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVG 217
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
IA+ + +AL +LHS +IHRDVK +NVL++ K+ DFGI K +
Sbjct: 114 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--- 169
Query: 285 LTGTRPYMPPEAMHCQI-----STKTDVFSYGVILLELLTGMKPIDDNNT 329
G +PYM PE ++ ++ S K+D++S G+ ++EL P D T
Sbjct: 170 -AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT 218
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTEN 519
IA+ + +AL +LHS +IHRDVK +NVL++ K+ DFGI V + +
Sbjct: 114 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGI----SGYLVDDVAKDI 168
Query: 520 LTGTRPYMPPEAMHCQI-----STKTDVFSYG 546
G +PYM PE ++ ++ S K+D++S G
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLG 200
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 199 MCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 258
+C G L + L ++ + PL + I A+ ++H PIIHRD+K N+LL
Sbjct: 115 LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ 174
Query: 259 FVPKLGDFGIVKM-------SETSNMKTMYTENLT-GTRP-YMPPEAM----HCQISTKT 305
KL DFG S ++ + + E +T T P Y PE + + I K
Sbjct: 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234
Query: 306 DVFSYGVILLELLTGMKPIDDN 327
D+++ G IL L P +D
Sbjct: 235 DIWALGCILYLLCFRQHPFEDG 256
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 443 LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 502
L ++ + PL + I A+ ++H PIIHRD+K N+LL KL DFG
Sbjct: 124 LKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
Query: 503 IVKM-------SETSNVKTMYTENLT-GTRP-YMPPEAM----HCQISTKTDVFSYG 546
S ++ + + E +T T P Y PE + + I K D+++ G
Sbjct: 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 84
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 196
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 191
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVG 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 221 KRYSIALGVAE---ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
K ++ L + E AL YL + + IIHRD+K N+LLDE+ + DF I M
Sbjct: 113 KEETVKLFICELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 278 KTMYTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYGVILLELLTGMKP 323
T + GT+PYM PE + S D +S GV ELL G +P
Sbjct: 171 IT----TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 456 KRYSIALGVAE---ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM-SETSN 511
K ++ L + E AL YL + + IIHRD+K N+LLDE+ + DF I M +
Sbjct: 113 KEETVKLFICELVMALDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGAQIKTQHITNVDIADRERYYSLQT 570
+ TM GT+PYM PE S K +S+ + +T ++ R Y +++
Sbjct: 171 ITTM-----AGTKPYMAPEMFS---SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 80
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGY----VATRWYRA 192
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGY----VAT 187
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVG 212
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 80
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 192
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 187
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVG 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 97
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 209
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 270 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 153 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 204
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVG 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 84
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGY----VATRWYRA 196
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGY----VAT 191
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVG 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PE----AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLD 348
PE AMH + D++S G I+ ELLTG + I L++ P E+L
Sbjct: 191 PEIMLNAMH--YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 248
Query: 349 KEAGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
K + E ++++L IG + EK V + DKR
Sbjct: 249 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPE----AMHCQISTKTDVFSYG 546
R Y PE AMH + D++S G
Sbjct: 186 RWYRAPEIMLNAMH--YNQTVDIWSVG 210
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 83
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 195
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 303
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 190
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVG 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 90
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 202
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 146 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 197
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVG 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 90
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 202
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 146 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 197
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVG 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 80
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 192
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 187
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVG 212
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ-----------SIIHAKRTYRELRLLKHM 90
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 202
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 146 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 197
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVG 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 83
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 195
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 303
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 139 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 190
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVG 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 177 HVNLLRLLGLCNNIMNC-----IVYEYMCNGSLYDRLARVNNTPP-LDSNKRYSIALGVA 230
H N+LRL+ C ++ + G+L++ + R+ + L ++ + LG+
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS---ETSNMKTMYTENLTG 287
L +H+ K HRD+K N+LL + P L D G + + + + + ++
Sbjct: 145 RGLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 288 TR---PYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPID 325
R Y PE HC I +TDV+S G +L ++ G P D
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 460 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS---ETSNVKTMY 516
+ LG+ L +H+ K HRD+K N+LL + P L D G + + + + +
Sbjct: 139 LLLGICRGLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT 196
Query: 517 TENLTGTR---PYMPPEAM----HCQISTKTDVFSYG 546
++ R Y PE HC I +TDV+S G
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 84
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 196
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 304
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 191
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVG 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 98
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 210
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 271 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 318
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 154 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 205
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVG 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 77
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 138 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 189
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 249
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 250 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 133 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 184
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVG 209
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 89
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 201
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 309
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 145 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 196
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVG 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 41/220 (18%)
Query: 117 LGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG V+ K + +G +K ++ E A E EV+ L++
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYN----------NEKA-------EREVKALAKL 61
Query: 176 KHVNLLRLLGLCNNI---------------MNCIVYEY-MCNGSLYDRLARVNNTPPLDS 219
HVN++ G + C+ + C+ ++ LD
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
+ + + + Y+HS K +I+RD+K +N+ L + K+GDFG+V TS
Sbjct: 122 VLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLV----TSLKND 175
Query: 280 MYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELL 318
GT YM PE + Q + D+++ G+IL ELL
Sbjct: 176 GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + Y+HS K +I+RD+K +N+ L + K+GDFG+V TS GT
Sbjct: 131 ITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLV----TSLKNDGKRXRSKGT 184
Query: 524 RPYMPPEAMHCQ-ISTKTDVFSYG 546
YM PE + Q + D+++ G
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALG 208
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 80
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 192
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 300
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 136 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 187
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVG 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 216 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 275
P+ S + VA + +L S + IHRD+ + N+LL EN V K+ DFG+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLAR-DIYK 251
Query: 276 NMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLT 319
N + + +M PE++ +I STK+DV+SYGV+L E+ +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
P+ S + VA + +L S + IHRD+ + N+LL EN V K+ DFG+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLAR-DIYK 251
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYG 546
N + + +M PE++ +I STK+DV+SYG
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYG 288
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V EYM G L + ++ N P + Y+ V AL +HS+ IHRDVK N+
Sbjct: 151 MVMEYMPGGDLVNLMS--NYDVPEKWARFYTAE--VVLALDAIHSMG--FIHRDVKPDNM 204
Query: 254 LLDENFVPKLGDFGI-VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-----ISTKTDV 307
LLD++ KL DFG +KM++ ++ + GT Y+ PE + Q + D
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 308 FSYGVILLELLTGMKPI 324
+S GV L E+L G P
Sbjct: 262 WSVGVFLYEMLVGDTPF 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETSNVKTMYTENLTG 522
V AL +HS+ IHRDVK N+LLD++ KL DFG +KM++ V+ + G
Sbjct: 182 VVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR---CDTAVG 236
Query: 523 TRPYMPPEAMHCQ 535
T Y+ PE + Q
Sbjct: 237 TPDYISPEVLKSQ 249
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 85
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 197
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 141 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 192
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVG 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V EYM G L + ++ N P + Y+ V AL +HS+ IHRDVK N+
Sbjct: 146 MVMEYMPGGDLVNLMS--NYDVPEKWARFYTAE--VVLALDAIHSMG--FIHRDVKPDNM 199
Query: 254 LLDENFVPKLGDFGI-VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-----ISTKTDV 307
LLD++ KL DFG +KM++ ++ + GT Y+ PE + Q + D
Sbjct: 200 LLDKSGHLKLADFGTCMKMNKEGMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDW 256
Query: 308 FSYGVILLELLTGMKPI 324
+S GV L E+L G P
Sbjct: 257 WSVGVFLYEMLVGDTPF 273
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETSNVKTMYTENLTG 522
V AL +HS+ IHRDVK N+LLD++ KL DFG +KM++ V+ + G
Sbjct: 177 VVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR---CDTAVG 231
Query: 523 TRPYMPPEAMHCQ 535
T Y+ PE + Q
Sbjct: 232 TPDYISPEVLKSQ 244
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 186
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 294
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 181
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVG 206
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL------- 84
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
+ H+N++ LLG C +M + + N S Y R R P D K +
Sbjct: 85 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 224 -------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
+ VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 141 LTLEHLICYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLAR---DIY 195
Query: 277 MKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 196 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 153 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 207
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFG 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 76
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 137 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 188
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 248
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 249 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 296
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 132 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 183
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVG 208
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KL E G ++ G+ + G +I VK L+ F E L
Sbjct: 17 KLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRD-----------FNEECPRLRIF 64
Query: 176 KHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H N+L +LG C + ++ +M GSLY+ L N +D ++ AL +A
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV-VDQSQAVKFALDMARG 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+ +LH+L I + S +V++DE+ ++ VK S S + MY ++
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPGR-MYAPA------WV 175
Query: 293 PPEAMHCQIS----TKTDVFSYGVILLELLTGMKPIDD 326
PEA+ + D++S+ V+L EL+T P D
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V EYM G L + ++ N P + Y+ V AL +HS+ IHRDVK N+
Sbjct: 151 MVMEYMPGGDLVNLMS--NYDVPEKWARFYTAE--VVLALDAIHSMG--FIHRDVKPDNM 204
Query: 254 LLDENFVPKLGDFGI-VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-----ISTKTDV 307
LLD++ KL DFG +KM++ ++ + GT Y+ PE + Q + D
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 308 FSYGVILLELLTGMKPI 324
+S GV L E+L G P
Sbjct: 262 WSVGVFLYEMLVGDTPF 278
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI-VKMSETSNVKTMYTENLTG 522
V AL +HS+ IHRDVK N+LLD++ KL DFG +KM++ V+ + G
Sbjct: 182 VVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR---CDTAVG 236
Query: 523 TRPYMPPEAMHCQ 535
T Y+ PE + Q
Sbjct: 237 TPDYISPEVLKSQ 249
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 75
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 187
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 131 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 182
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVG 207
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 101
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 213
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 321
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 157 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 208
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVG 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 75
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 187
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 131 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 182
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVG 207
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 35/257 (13%)
Query: 117 LGEGQFGTV---YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+G G +G+V Y +L+ ++AVK L ++I E++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQ-----------SLIHARRTYRELRLLK 82
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
KH N++ LL + + + Y+ + L + + L + +
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG---T 288
L Y+HS IIHRD+K +NV ++E+ ++ DFG+ + ++ E +TG T
Sbjct: 143 GLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQAD---------EEMTGYVAT 191
Query: 289 RPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 345
R Y PE M + D++S G I+ ELL G ++ I ++E P E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 346 VLDKEAGEWNETHVETL 362
VL K + E T++++L
Sbjct: 252 VLAKISSEHARTYIQSL 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG---T 523
L Y+HS IIHRD+K +NV ++E+ ++ DFG+ + ++ E +TG T
Sbjct: 143 GLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQAD---------EEMTGYVAT 191
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVG 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 164 LFENEVQTLSQCKHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ E+ L + H N+++L + +V E + G L+DR+ D+
Sbjct: 94 IVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA 153
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNMK 278
L EA+ YLH I+HRD+K N LL P K+ DFG+ K+ E
Sbjct: 154 VKQIL---EAVAYLHE--NGIVHRDLKPEN-LLYATPAPDAPLKIADFGLSKIVE----H 203
Query: 279 TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNN 328
+ + + GT Y PE + C + D++S G+I LL G +P D
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVP----KLGDFGIVKMSETSNVKTMYTEN 519
+ EA+ YLH I+HRD+K N LL P K+ DFG+ K+ E + +
Sbjct: 157 ILEAVAYLHE--NGIVHRDLKPEN-LLYATPAPDAPLKIADFGLSKIVE----HQVLMKT 209
Query: 520 LTGTRPYMPPEAMH-CQISTKTDVFSYG 546
+ GT Y PE + C + D++S G
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVG 237
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
+ + + Y+HS K +IHRD+K +N+ L + K+GDFG+V + +T GT
Sbjct: 145 ITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS----KGT 198
Query: 289 RPYMPPEAMHCQ-ISTKTDVFSYGVILLELL 318
YM PE + Q + D+++ G+IL ELL
Sbjct: 199 LRYMSPEQISSQDYGKEVDLYALGLILAELL 229
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ + + Y+HS K +IHRD+K +N+ L + K+GDFG+V + +T GT
Sbjct: 145 ITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS----KGT 198
Query: 524 RPYMPPEAMHCQ-ISTKTDVFSYG 546
YM PE + Q + D+++ G
Sbjct: 199 LRYMSPEQISSQDYGKEVDLYALG 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V +K+G++IAVK L ++I E++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 107
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 168 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 219
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTG 320
PE M + D++S G I+ ELLTG
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 163 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 214
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVG 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL------- 86
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP--PLDSNK 221
+ H+N++ LLG C +M + + N S Y R R P P D K
Sbjct: 87 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 222 RY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 274
+ + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIX 199
Query: 275 SNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
+ + + +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + + + +
Sbjct: 157 VAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIXKDPDXVRKGDARLP 213
Query: 524 RPYMPPEAMHCQIST-KTDVFSYG 546
+M PE + ++ T ++DV+S+G
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFG 237
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG V KLKN ++ A+K L + A E +V
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEML--------KRAETACFREERDVLVNGDS 133
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA-EALH 234
K + L +N + +V +Y G L L++ + P + + Y + +A +++H
Sbjct: 134 KWITTLHYAFQDDNNLY-LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG-IVKMSETSNMKTMYTENLTGTRPYMP 293
LH +HRD+K N+L+D N +L DFG +K+ E +++ GT Y+
Sbjct: 193 QLH-----YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA---VGTPDYIS 244
Query: 294 PEAMHC------QISTKTDVFSYGVILLELLTGMKPI 324
PE + + + D +S GV + E+L G P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 443 LARVNNTPPLDSNKRYSIALGVA-EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 501
L++ + P + + Y + +A +++H LH +HRD+K N+L+D N +L DF
Sbjct: 165 LSKFEDRLPEEMARFYLAEMVIAIDSVHQLH-----YVHRDIKPDNILMDMNGHIRLADF 219
Query: 502 G-IVKMSETSNVKTMYTENLTGTRPYMPPEAMH 533
G +K+ E V++ GT Y+ PE +
Sbjct: 220 GSCLKLMEDGTVQSSVA---VGTPDYISPEILQ 249
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +GTV+ K + EI L+ + A E+ L +
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIV--ALKRVRLDDDDEGVPSSAL--------REICLLKEL 58
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
KH N++RL + ++ +V+E+ C+ L N LD S + + L
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLG 115
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPP 294
+ HS + ++HRD+K N+L++ N KL +FG+ + ++ E +T Y PP
Sbjct: 116 FCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLW--YRPP 170
Query: 295 EAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTI 330
+ + ST D++S G I EL +P+ N +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD S + + L + HS + ++HRD+K N+L++ N KL +FG+ +
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP- 154
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGA 547
V+ E +T Y PP+ + ST D++S G
Sbjct: 155 VRCYSAEVVTLW--YRPPDVLFGAKLYSTSIDMWSAGC 190
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 49/291 (16%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG---TRP 290
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ + +TG TR
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---------DEMTGXVATRW 187
Query: 291 YMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVL 347
Y PE M + D++S G I+ ELLTG + I L++ P E+L
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 348 DKEAGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
K + E ++++L IG + EK V + DKR +
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG- 522
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ + +TG
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---------DEMTGX 182
Query: 523 --TRPYMPPEAM--HCQISTKTDVFSYG 546
TR Y PE M + D++S G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 84
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 196
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 257 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 302
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 140 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 191
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVG 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 50/232 (21%)
Query: 117 LGEGQFGTVYYGKLKNGME---IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
LG+G FG V K +N ++ A+K + TE + IL +EV L+
Sbjct: 14 LGQGAFGQVV--KARNALDSRYYAIKKIRH-----------TEEKLSTIL---SEVXLLA 57
Query: 174 QCKHVNLLRLLGLCNNIMNC--------------IVYEYMCNGSLYDRLARVNNTPPLDS 219
H ++R N I EY N +LYD + N D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMK 278
R + + EAL Y+HS + IIHR++K N+ +DE+ K+GDFG+ K + + ++
Sbjct: 118 YWR--LFRQILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 279 TMYTENL----------TGTRPYMPPEAMH--CQISTKTDVFSYGVILLELL 318
+ ++NL GT Y+ E + + K D +S G+I E +
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTG 522
+ EAL Y+HS + IIHR++K N+ +DE+ K+GDFG+ K + + ++ + ++NL G
Sbjct: 125 ILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 523 T 523
+
Sbjct: 183 S 183
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 115/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 101
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ TR Y
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MXGYVATRWYRA 213
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 319
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ T
Sbjct: 157 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MXGYVAT 208
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVG 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 36/232 (15%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 85
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP---PLDSN 220
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 86 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLY 141
Query: 221 KRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 273
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DI 198
Query: 274 TSNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
+ + + +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + + + +
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIXKDPDXVRKGDARLP 213
Query: 524 RPYMPPEAMHCQIST-KTDVFSYG 546
+M PE + ++ T ++DV+S+G
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFG 237
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 186
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 181
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVG 206
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 97
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 209
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 270 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 315
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 153 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 204
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVG 229
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 117 LGEGQFGTV---YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+G G +G+V Y +L+ ++AVK L ++I E++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQ-----------SLIHARRTYRELRLLK 74
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
KH N++ LL + + + Y+ + L + L + +
Sbjct: 75 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG---T 288
L Y+HS IIHRD+K +NV ++E+ ++ DFG+ + ++ E +TG T
Sbjct: 135 GLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQAD---------EEMTGYVAT 183
Query: 289 RPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 345
R Y PE M + D++S G I+ ELL G ++ I ++E P E
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 243
Query: 346 VLDKEAGEWNETHVETL 362
VL K + E T++++L
Sbjct: 244 VLAKISSEHARTYIQSL 260
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG---T 523
L Y+HS IIHRD+K +NV ++E+ ++ DFG+ + ++ E +TG T
Sbjct: 135 GLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQAD---------EEMTGYVAT 183
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVG 208
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ D+G+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ D+G+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 98
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 210
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 154 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 205
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVG 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
++ EY+ G L+ +L R ++ + +A ++ AL +LH K II+RD+K N+
Sbjct: 98 LILEYLSGGELFMQLEREGIF--MEDTACFYLA-EISMALGHLHQ--KGIIYRDLKPENI 152
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGV 312
+L+ KL DFG+ K S T GT YM PE M + D +S G
Sbjct: 153 MLNHQGHVKLTDFGLCKESIHDG---TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 313 ILLELLTGMKPIDDNN 328
++ ++LTG P N
Sbjct: 210 LMYDMLTGAPPFTGEN 225
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
++ AL +LH K II+RD+K N++L+ KL DFG+ K S T GT
Sbjct: 130 ISMALGHLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHTFCGT 184
Query: 524 RPYMPPEA-MHCQISTKTDVFSYGA 547
YM PE M + D +S GA
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGA 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 75
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 76 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-D 188
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
+ + + +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 189 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + + + +
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIXKDPDXVRKGDARLP 204
Query: 524 RPYMPPEAMHCQIST-KTDVFSYG 546
+M PE + ++ T ++DV+S+G
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFG 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 71 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 127 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFL 184
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 237
Query: 582 S 582
+
Sbjct: 238 N 238
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 117 LGEGQFGTV---YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+G G +G+V Y +L+ ++AVK L ++I E++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQ-----------SLIHARRTYRELRLLK 82
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE 231
KH N++ LL + + + Y+ + L + L + +
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG---T 288
L Y+HS IIHRD+K +NV ++E+ ++ DFG+ + ++ E +TG T
Sbjct: 143 GLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQAD---------EEMTGYVAT 191
Query: 289 RPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 345
R Y PE M + D++S G I+ ELL G ++ I ++E P E
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 346 VLDKEAGEWNETHVETL 362
VL K + E T++++L
Sbjct: 252 VLAKISSEHARTYIQSL 268
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTG---T 523
L Y+HS IIHRD+K +NV ++E+ ++ DFG+ + ++ E +TG T
Sbjct: 143 GLKYIHSAG--IIHRDLKPSNVAVNEDSELRILDFGLARQAD---------EEMTGYVAT 191
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVG 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 88
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 149 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 200
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 260
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 261 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 144 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 195
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVG 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYXQRTL------------ 73
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 74 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 130 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 241
Query: 582 S 582
+
Sbjct: 242 N 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y TR Y
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VATRWYRA 186
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 294
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + T + T Y T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY----VAT 181
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVG 206
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
++ EY+ G L+ +L R ++ + +A ++ AL +LH K II+RD+K N+
Sbjct: 98 LILEYLSGGELFMQLEREGIF--MEDTACFYLA-EISMALGHLHQ--KGIIYRDLKPENI 152
Query: 254 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGV 312
+L+ KL DFG+ K S T GT YM PE M + D +S G
Sbjct: 153 MLNHQGHVKLTDFGLCKESIHDG---TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 313 ILLELLTGMKPIDDNN 328
++ ++LTG P N
Sbjct: 210 LMYDMLTGAPPFTGEN 225
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
++ AL +LH K II+RD+K N++L+ KL DFG+ K S T GT
Sbjct: 130 ISMALGHLHQ--KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHXFCGT 184
Query: 524 RPYMPPEA-MHCQISTKTDVFSYGA 547
YM PE M + D +S GA
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGA 209
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V E M G L D++ R + ++ + + + YLH+ + ++HRD+K +N+
Sbjct: 93 VVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA--QGVVHRDLKPSNI 147
Query: 254 L-LDENFVP---KLGDFGIVKMSETSN---MKTMYTENLTGTRPYMPPEAMHCQ-ISTKT 305
L +DE+ P ++ DFG K N M YT N ++ PE + Q
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN------FVAPEVLERQGYDAAC 201
Query: 306 DVFSYGVILLELLTGMKPI 324
D++S GV+L +LTG P
Sbjct: 202 DIWSLGVLLYTMLTGYTPF 220
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVL-LDENFVP---KLGDFGIVKMSETSNVKT 514
++ + + + YLH+ + ++HRD+K +N+L +DE+ P ++ DFG K N
Sbjct: 120 AVLFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 515 M---YTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQIKT 551
M YT N ++ PE + Q D++S G + T
Sbjct: 178 MTPCYTAN------FVAPEVLERQGYDAACDIWSLGVLLYT 212
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 84
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 85 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-D 197
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
+ + + +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + + + +
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIXKDPDXVRKGDARLP 213
Query: 524 RPYMPPEAMHCQIST-KTDVFSYG 546
+M PE + ++ T ++DV+S+G
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFG 237
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 74
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ TR Y
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVATRWYRA 186
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ T
Sbjct: 130 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MAGFVAT 181
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVG 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 84
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 85 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-- 196
Query: 273 ETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 197 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 211
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFG 237
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 86
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 87 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL 142
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 143 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-- 198
Query: 273 ETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 199 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 159 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 213
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFG 239
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 71 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 127 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 237
Query: 582 S 582
+
Sbjct: 238 N 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 71 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 127 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 237
Query: 582 S 582
+
Sbjct: 238 N 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 73
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 74 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 130 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 241
Query: 582 S 582
+
Sbjct: 242 N 242
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
AL +LHS + ++H DVK AN+ L KLGDFG++ T+ E G Y
Sbjct: 169 ALAHLHS--QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA----GEVQEGDPRY 222
Query: 292 MPPEAMHCQISTKTDVFSYGVILLELLTGMK 322
M PE + T DVFS G+ +LE+ M+
Sbjct: 223 MAPELLQGSYGTAADVFSLGLTILEVACNME 253
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
AL +LHS + ++H DVK AN+ L KLGDFG++ T+ E G Y
Sbjct: 169 ALAHLHS--QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA----GEVQEGDPRY 222
Query: 527 MPPEAMHCQISTKTDVFSYGAQI 549
M PE + T DVFS G I
Sbjct: 223 MAPELLQGSYGTAADVFSLGLTI 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 84
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 85 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-D 197
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
+ + + +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 198 IYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + + + +
Sbjct: 157 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDXVRKGDARLP 213
Query: 524 RPYMPPEAMHCQIST-KTDVFSYG 546
+M PE + ++ T ++DV+S+G
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFG 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 121
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + + N S Y R R P P D
Sbjct: 122 ----IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 178 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-- 233
Query: 273 ETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 234 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 194 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 248
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFG 274
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFE--NEVQTLS 173
LGEG +G V K EI A+K +E P+ E++ L
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--------------PLFALRTLREIKILK 64
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKRYSIALG 228
KH N++ + NI +E Y+ + L RV +T L +
Sbjct: 65 HFKHENIITIF----NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--------SETSNMKTM 280
A+ LH + +IHRD+K +N+L++ N K+ DFG+ ++ SE + ++
Sbjct: 121 TLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELL 318
TE + TR Y PE M + S DV+S G IL EL
Sbjct: 179 MTEXV-ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKM--------SETSNVKTMYTENLTGTRPYMPP 529
+IHRD+K +N+L++ N K+ DFG+ ++ SE + ++ TE + TR Y P
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV-ATRWYRAP 191
Query: 530 EAM--HCQISTKTDVFSYG 546
E M + S DV+S G
Sbjct: 192 EVMLTSAKYSRAMDVWSCG 210
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 73
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 74 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 130 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 241
Query: 582 S 582
+
Sbjct: 242 N 242
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 28 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 74
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 75 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 131 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 138 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 242
Query: 582 S 582
+
Sbjct: 243 N 243
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 21 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 67
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 68 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 124 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 131 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 235
Query: 582 S 582
+
Sbjct: 236 N 236
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 163 LLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNK 221
+L + E+ L+ +H N+L L ++ + ++E++ +++R+ NT + N+
Sbjct: 46 VLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI----NTSAFELNE 101
Query: 222 R--YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT 279
R S V EAL +LHS I H D++ N++ + I++ + +K
Sbjct: 102 REIVSYVHQVCEALQFLHS--HNIGHFDIRPENIIYQTR---RSSTIKIIEFGQARQLKP 156
Query: 280 MYTENLTGTRP--YMPPEAMHCQISTKTDVFSYGVILLELLTGMKP 323
L T P Y P H +ST TD++S G ++ LL+G+ P
Sbjct: 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 448 NTPPLDSNKR--YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD--ENFVPKLGDFGI 503
NT + N+R S V EAL +LHS I H D++ N++ + K+ +FG
Sbjct: 93 NTSAFELNEREIVSYVHQVCEALQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQ 150
Query: 504 VK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYG 546
+ + N + ++T Y P H +ST TD++S G
Sbjct: 151 ARQLKPGDNFRLLFT----APEYYAPEVHQHDVVSTATDMWSLG 190
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 79 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 134
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 135 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 192
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 193 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 235
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 141 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 245
Query: 582 S 582
+
Sbjct: 246 N 246
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 71 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 127 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 237
Query: 582 S 582
+
Sbjct: 238 N 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 73 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 129 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 239
Query: 582 S 582
+
Sbjct: 240 N 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 28 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 74
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 75 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 131 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 138 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 242
Query: 582 S 582
+
Sbjct: 243 N 243
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 29 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 75
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 76 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 131
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 132 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 233
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 139 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 243
Query: 582 S 582
+
Sbjct: 244 N 244
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 20 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 66
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 67 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 122
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 123 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 224
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 130 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 234
Query: 582 S 582
+
Sbjct: 235 N 235
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 27 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 73
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 74 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 130 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 241
Query: 582 S 582
+
Sbjct: 242 N 242
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 111 PRRGN--KLGEGQFGTV--YYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFE 166
PR N +GEG +G V Y L N + +A+K +
Sbjct: 21 PRYTNLSYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTL------------ 67
Query: 167 NEVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNK 221
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 68 REIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 222 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 281
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 124 ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 282 TENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 131 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 235
Query: 582 S 582
+
Sbjct: 236 N 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 98
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ TR Y
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MXGXVATRWYRA 210
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 316
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DFG+ + ++ T
Sbjct: 154 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------MXGXVAT 205
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVG 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 75 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 131 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 241
Query: 582 S 582
+
Sbjct: 242 N 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 71 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 127 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 237
Query: 582 S 582
+
Sbjct: 238 N 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 91 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 146
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 147 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 204
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 153 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERY 565
R Y PE M + + TK+ D++S G I + ++N I + Y
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSNRPIFPGKHY 253
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFE--NEVQTLS 173
LGEG +G V K EI A+K +E P+ E++ L
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--------------PLFALRTLREIKILK 64
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKRYSIALG 228
KH N++ + NI +E Y+ + L RV +T L +
Sbjct: 65 HFKHENIITIF----NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--------SETSNMKTM 280
A+ LH + +IHRD+K +N+L++ N K+ DFG+ ++ SE + ++
Sbjct: 121 TLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELL 318
TE TR Y PE M + S DV+S G IL EL
Sbjct: 179 MTE-YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKM--------SETSNVKTMYTENLTGTRPYMPP 529
+IHRD+K +N+L++ N K+ DFG+ ++ SE + ++ TE TR Y P
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE-YVATRWYRAP 191
Query: 530 EAM--HCQISTKTDVFSYG 546
E M + S DV+S G
Sbjct: 192 EVMLTSAKYSRAMDVWSCG 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 39/244 (15%)
Query: 114 GNKLGEGQFGTVYYGKLK----NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEV 169
G LG+G+FG+V +LK + +++AVK L+ A I F E
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-----------ASSDIEEFLREA 76
Query: 170 QTLSQCKHVNLLRLLGLCNNI-------MNCIVYEYMCNGSLYDRL--ARVNNTP---PL 217
+ + H ++ +L+G+ + ++ +M +G L+ L +R+ P PL
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
+ R+ + +A + YL S + IHRD+ + N +L E+ + DFG+ + + +
Sbjct: 137 QTLVRFMV--DIACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD- 191
Query: 278 KTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKPIDD-NNTILY 332
Y + P ++ E++ + T +DV+++GV + E++T G P N +Y
Sbjct: 192 --YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY 249
Query: 333 YYLV 336
YL+
Sbjct: 250 NYLI 253
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 425 IPVIILDTGETKQCQLFKLA-RVNNTP---PLDSNKRYSIALGVAEALHYLHSLSKPIIH 480
IP++IL + F LA R+ P PL + R+ + +A + YL S + IH
Sbjct: 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV--DIACGMEYLSS--RNFIH 160
Query: 481 RDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP--YMPPEAMHCQIST 538
RD+ + N +L E+ + DFG+ + + + Y + P ++ E++ + T
Sbjct: 161 RDLAARNCMLAEDMTVCVADFGLSRKIYSGDY---YRQGCASKLPVKWLALESLADNLYT 217
Query: 539 -KTDVFSYG 546
+DV+++G
Sbjct: 218 VHSDVWAFG 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 168 EVQTLSQCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKR 222
E++ L + +H N++ + N+I+ E Y+ + L ++ T L ++
Sbjct: 91 EIKILLRFRHENIIGI----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI 146
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T +
Sbjct: 147 CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 204
Query: 283 ENLTGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 153 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERY 565
R Y PE M + + TK+ D++S G I + ++N I + Y
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSNRPIFPGKHY 253
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 37/233 (15%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 75
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + N S Y R R P P D
Sbjct: 76 ----IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-D 188
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
+ + + +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 189 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + + + +
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIXKDPDXVRKGDARLP 204
Query: 524 RPYMPPEAMHCQIST-KTDVFSYG 546
+M PE + ++ T ++DV+S+G
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFG 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 289 RPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
R Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 241
Query: 582 S 582
+
Sbjct: 242 N 242
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ FG+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ FG+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 123/296 (41%), Gaps = 55/296 (18%)
Query: 118 GEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENE----VQTL 172
G+G FGTV GK K+ GM +A+K + I F N +Q L
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKV------------------IQDPRFRNRELQIMQDL 73
Query: 173 SQCKHVNLLRL------LGLCN--NIMNCIVYEYM------CNGSLYDRLARVNNTPPLD 218
+ H N+++L LG + +I +V EY+ C + Y R PP
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQV----APPPI 129
Query: 219 SNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNM 277
K + L ++ LH S + HRD+K NVL++E + KL DFG K S
Sbjct: 130 LIKVFLFQL--IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187
Query: 278 KTMYTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPI--DDNNTILYY 333
Y +R Y PE + + +T D++S G I E++ G +PI DN+ +
Sbjct: 188 NVAY----ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQLH 242
Query: 334 YLVVEQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIVDLLS 389
+V P REVL K + + GI + VF ++ DLLS
Sbjct: 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSN--VFSDHSLKDAKEAYDLLS 296
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 471 LHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
LH S + HRD+K NVL++E + KL DFG K S Y +R Y P
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY----ICSRYYRAP 200
Query: 530 EAM--HCQISTKTDVFSYG 546
E + + +T D++S G
Sbjct: 201 ELIFGNQHYTTAVDIWSVG 219
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG + K E +AVK +E + E+
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN--------------VQREIINHRSL 73
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++R + + I+ EY G LY+R+ N ++ + +
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLSGVS 130
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNMKTMYTENLTGTRPYM 292
Y HS+ I HRD+K N LLD + P+L DFG K S++ ++ GT Y+
Sbjct: 131 YCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYI 184
Query: 293 PPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 326
PE + Q DV+S GV L +L G P +D
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNVKTMYTENLTGTR 524
+ Y HS+ I HRD+K N LLD + P+L DFG K S+V ++ GT
Sbjct: 128 GVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTP 181
Query: 525 PYMPPEAMHCQ--ISTKTDVFSYGAQI 549
Y+ PE + Q DV+S G +
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 289 RPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
R Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 239
Query: 582 S 582
+
Sbjct: 240 N 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 289 RPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
R Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+LL+ K+ DFG+ ++++ + T + T
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 239
Query: 582 S 582
+
Sbjct: 240 N 240
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 75
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + N S Y R R P P D
Sbjct: 76 ----IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-- 187
Query: 273 ETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 188 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 202
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFG 228
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 114 GNKLGEGQFGTVY----YG--KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN 167
G LG G FG V +G K +AVK L+ +E ++
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL------- 75
Query: 168 EVQTLSQCKHVNLLRLLGLCNN----IMNCIVYEYMCNGSLYDRLARVNNTP----PLDS 219
+ H+N++ LLG C +M + N S Y R R P P D
Sbjct: 76 ----IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 220 NKRY-------SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 272
K + + VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-- 187
Query: 273 ETSNMKTMYTENLTGTRP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
Y P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 188 -DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 148 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 202
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFG 228
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRL-ARVNNTPPLDSNKRYSIALGVAEA 232
H N+++LL + + +V+E++ + L D + A PL K Y L +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L + HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 116 LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YR 170
Query: 293 PPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 157 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 191
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G+G F V KL G E A K + A I LL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL----------- 60
Query: 176 KHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
KH N++RL + + +V++ + G L++ + D++ + EA+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVL 117
Query: 235 YLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ H + ++HRD+K N+LL + KL DFG+ + + + + GT Y
Sbjct: 118 HCHQMG--VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWF--GFAGTPGY 172
Query: 292 MPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
+ PE + + K D+++ GVIL LL G P D +
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDED 210
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+ EA+ + H + ++HRD+K N+LL + KL DFG+ + + + +
Sbjct: 112 ILEAVLHCHQMG--VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWF--GF 166
Query: 521 TGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT Y+ PE + + K D+++ G
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACG 193
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + ++L GT
Sbjct: 137 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPN 191
Query: 291 YMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
Y+ PE + C+ S + D++S G IL LL G P +
Sbjct: 192 YIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + ++L GT
Sbjct: 137 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPN 191
Query: 526 YMPPEAMHCQI--STKTDVFSYGAQIKT 551
Y+ PE + C+ S + D++S G + T
Sbjct: 192 YIAPEVL-CKKGHSFEVDIWSLGCILYT 218
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + ++L GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPN 207
Query: 291 YMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
Y+ PE + C+ S + D++S G IL LL G P +
Sbjct: 208 YIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + ++L GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPN 207
Query: 526 YMPPEAMHCQI--STKTDVFSYGAQIKT 551
Y+ PE + C+ S + D++S G + T
Sbjct: 208 YIAPEVL-CKKGHSFEVDIWSLGCILYT 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ D G+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ D G+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 62
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 120
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 121 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 175
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVT 203
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 105 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 161 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 195
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 117 SFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 157 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 191
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 118 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 172
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 102 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 158 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 192
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 57
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 115
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 170
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 100 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 156 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 190
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 157 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 191
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 57
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 115
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 170
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 100 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 156 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 190
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 157 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 191
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 167 NEVQTLSQCKHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 225
E+Q L + +H N++ + + + + + Y+ + L ++ + L ++
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF 149
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 285
+ L Y+HS + ++HRD+K +N+L++ K+ DFG+ ++++ + T +
Sbjct: 150 LYQILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 286 TGTRPYMPPEAM-HCQISTKT-DVFSYGVILLELLTGMKPI 324
TR Y PE M + + TK+ D++S G IL E+L+ +PI
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS + ++HRD+K +N+L++ K+ DFG+ ++++ + T + T
Sbjct: 153 ILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 524 RPYMPPEAM-HCQISTKT-DVFSYGAQIKTQHITNVDIADRERYYSLQTMLPGHHEGDHV 581
R Y PE M + + TK+ D++S G I + ++N + + PG H D +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGC-ILAEMLSN------------RPIFPGKHYLDQL 257
Query: 582 S 582
+
Sbjct: 258 N 258
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 60
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRL-ARVNNTPPLDSNKRYSIALGVAEA 232
H N+++LL + + +V+E++ + L D + A PL K Y L +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQG 117
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L + HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 118 LAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YR 172
Query: 293 PPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 103 PLPLIKSYLFQL--LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 159 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 193
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 217 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 268
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 105 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 269 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + L GT Y+ PE + + S + DV+S G I+ LL G P +
Sbjct: 164 ATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 503
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 105 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQIKT 551
E + + L GT Y+ PE + + S + DV+S G + T
Sbjct: 164 ATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 209
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG + K E +AVK +E + E+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN--------------VKREIINHRSL 72
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++R + + IV EY G L++R+ N ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS 129
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKL--GDFGIVKMSETSNMKTMYTENLTGTRPYM 292
Y H++ + HRD+K N LLD + P+L DFG K S + ++ GT Y+
Sbjct: 130 YAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ----PKSAVGTPAYI 183
Query: 293 PPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 326
PE + + DV+S GV L +L G P +D
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKL--GDFGIVKMSETSNVKTMYTENLTGTR 524
+ Y H++ + HRD+K N LLD + P+L DFG K S V ++ GT
Sbjct: 127 GVSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKAS----VLHSQPKSAVGTP 180
Query: 525 PYMPPEAM 532
Y+ PE +
Sbjct: 181 AYIAPEVL 188
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ D G+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ D G+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 61
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+++LL + + +V+E++ + D A PL + + + G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 121 ---FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--Y 172
Query: 292 MPPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 104 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 160 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 194
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 65
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 123
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 124 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 178
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVT 206
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 108 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 164 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 198
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 217 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 268
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 105 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 269 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + L GT Y+ PE + + S + DV+S G I+ LL G P +
Sbjct: 164 ATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 503
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 105 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQIKT 551
E + + L GT Y+ PE + + S + DV+S G + T
Sbjct: 164 ATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 217 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 268
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 109 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
Query: 269 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + L GT Y+ PE + + S + DV+S G I+ LL G P +
Sbjct: 168 ATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 503
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 109 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQIKT 551
E + + L GT Y+ PE + + S + DV+S G + T
Sbjct: 168 ATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 157 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 191
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 60
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 119 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 173
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 103 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 159 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 193
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 201 NGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 260
G+L + LAR S V EA+ + H+ ++HRD+K N+L+D N
Sbjct: 151 RGALQEELAR-------------SFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLN-- 193
Query: 261 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELL 318
G+ ++ + +K + GTR Y PPE + H V+S G++L +++
Sbjct: 194 --RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 319 TGMKPIDDNNTILYYYLVVEQEV 341
G P + + I+ + Q V
Sbjct: 252 CGDIPFEHDEEIIRGQVFFRQRV 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 427 VIILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 486
V+IL+ E Q LF + L S V EA+ + H+ ++HRD+K
Sbjct: 132 VLILERPEPVQ-DLFDF--ITERGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDE 186
Query: 487 NVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFS 544
N+L+D N G+ ++ + +K + GTR Y PPE + H V+S
Sbjct: 187 NILIDLN----RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 545 YG 546
G
Sbjct: 243 LG 244
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 61
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRL-ARVNNTPPLDSNKRYSIALGVAEA 232
H N+++LL + + +V+E++ + L D + A PL K Y L +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
L + HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 119 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YR 173
Query: 293 PPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 104 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 160 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 194
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 117 LGEGQFGTVYYGKLKNGMEI-AVKTLEXXXXXXXXXXXXTEAAMIPILLFE--NEVQTLS 173
LGEG +G V K EI A+K +E P+ E++ L
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--------------PLFALRTLREIKILK 64
Query: 174 QCKHVNLLRLLGLCNNIMNCIVYE-----YMCNGSLYDRLARVNNTPPLDSNKRYSIALG 228
KH N++ + NI +E Y+ + L RV +T L +
Sbjct: 65 HFKHENIITIF----NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM--------SETSNMKTM 280
A+ LH + +IHRD+K +N+L++ N K+ DFG+ ++ SE + ++
Sbjct: 121 TLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 281 YTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELL 318
E TR Y PE M + S DV+S G IL EL
Sbjct: 179 MVE-FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVKM--------SETSNVKTMYTENLTGTRPYMPP 529
+IHRD+K +N+L++ N K+ DFG+ ++ SE + ++ E TR Y P
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE-FVATRWYRAP 191
Query: 530 EAM--HCQISTKTDVFSYG 546
E M + S DV+S G
Sbjct: 192 EVMLTSAKYSRAMDVWSCG 210
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G+ +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ D G+ + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKR 378
+ E ++++L IG + EK V + DKR
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ D G+ + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 225 IALGVAEALHYLHS-LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTE 283
IA+ + +AL +LHS LS +IHRDVK +NVL++ K DFGI K +
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-- 196
Query: 284 NLTGTRPYMPPEAMHCQI-----STKTDVFSYGVILLELLTGMKPIDDNNT 329
G +PY PE ++ ++ S K+D++S G+ +EL P D T
Sbjct: 197 --AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGT 245
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 19/107 (17%)
Query: 460 IALGVAEALHYLHS-LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTE 518
IA+ + +AL +LHS LS +IHRDVK +NVL++ K DFGI V + +
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL----VDDVAKD 194
Query: 519 NLTGTRPYMPPEAMHCQI-----STKTDVFSYGAQIKTQHITNVDIA 560
G +PY PE ++ ++ S K+D++S G IT +++A
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLG-------ITXIELA 234
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 117 AFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 157 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 191
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSL-YDRLARVNNTPPLDSNKR 222
+ E KH +++ LL ++ M +V+E+M L ++ + R D+
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA------DAGFV 128
Query: 223 YSIALG------VAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGI-VKMS 272
YS A+ + EAL Y H + IIHRDVK VLL EN P KLG FG+ +++
Sbjct: 129 YSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 186
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNNTIL 331
E+ + GT +M PE + + K DV+ GVIL LL+G P L
Sbjct: 187 ESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 242
Query: 332 Y 332
+
Sbjct: 243 F 243
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGI-VKMSETSNVKTMYTEN 519
+ EAL Y H + IIHRDVK VLL EN P KLG FG+ +++ E+ V
Sbjct: 141 ILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV----AGG 194
Query: 520 LTGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT +M PE + + K DV+ G
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCG 222
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 60
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 119 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 173
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 103 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 158
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 159 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 193
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 57
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 115
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 170
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 100 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 156 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 190
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 61
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 174
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 104 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 160 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 194
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 118 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 172
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 102 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 158 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 192
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 60
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 119 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 173
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 103 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 159 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 193
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 118 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 172
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 102 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 158 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 192
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 112 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
++ K+GEG +G VY + K G +A+K + TE +P E+
Sbjct: 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REIS 54
Query: 171 TLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
L + H N+++LL + + +V+E++ A PL K Y L
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-- 112
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ L + HS ++HRD+K N+L++ KL DFG+ + ++T E +T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW- 168
Query: 290 PYMPPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
Y PE + C+ ST D++S G I E++T
Sbjct: 169 -YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 157 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 191
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 157 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 191
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 118 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 172
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 102 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 158 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 192
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 61
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 174
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 104 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 160 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 194
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSL-YDRLARVNNTPPLDSNKR 222
+ E KH +++ LL ++ M +V+E+M L ++ + R D+
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA------DAGFV 126
Query: 223 YSIALG------VAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGI-VKMS 272
YS A+ + EAL Y H + IIHRDVK VLL EN P KLG FG+ +++
Sbjct: 127 YSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPI 324
E+ + GT +M PE + + K DV+ GVIL LL+G P
Sbjct: 185 ESG----LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGI-VKMSETSNVKTMYTEN 519
+ EAL Y H + IIHRDVK VLL EN P KLG FG+ +++ E+ V
Sbjct: 139 ILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV----AGG 192
Query: 520 LTGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT +M PE + + K DV+ G
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCG 220
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 112 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQ 170
++ K+GEG +G VY + K G +A+K + TE +P E+
Sbjct: 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REIS 53
Query: 171 TLSQCKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGV 229
L + H N+++LL + + +V+E++ A PL K Y L
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-- 111
Query: 230 AEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ L + HS ++HRD+K N+L++ KL DFG+ + ++T E +T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW- 167
Query: 290 PYMPPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
Y PE + C+ ST D++S G I E++T
Sbjct: 168 -YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 100 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 156 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 190
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + + L GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPN 207
Query: 291 YMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
Y+ PE + C+ S + D++S G IL LL G P +
Sbjct: 208 YIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + + L GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPN 207
Query: 526 YMPPEAMHCQI--STKTDVFSYGAQIKT 551
Y+ PE + C+ S + D++S G + T
Sbjct: 208 YIAPEVL-CKKGHSFEVDIWSLGCILYT 234
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 62
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 120
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 121 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 175
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVT 203
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 105 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 161 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 195
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 130 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--- 182
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 183 -ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYG 546
K Y +R Y PE + ++ DV+S G
Sbjct: 169 SAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDVWSAG 210
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 82
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 83 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 143 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--- 195
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 196 -ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 235
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 126 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 181
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYG 546
K Y +R Y PE + ++ DV+S G
Sbjct: 182 SAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDVWSAG 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 130 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--- 182
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 183 -ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYG 546
K Y +R Y PE + ++ DV+S G
Sbjct: 169 SAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDVWSAG 210
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 59
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 118 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 172
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 102 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 158 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 192
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 57
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSIALGVAE 231
H N+++LL + + +V+E++ + D A PL + + + G+A
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 117 ---FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWY 168
Query: 292 MPPEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 100 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 156 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 190
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 130 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--- 182
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 183 -ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYG 546
K Y +R Y PE + ++ DV+S G
Sbjct: 169 SAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDVWSAG 210
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 61
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 120 AFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 174
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 104 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 159
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 160 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 194
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 97
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 98 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 155
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 156 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY- 210
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 211 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 250
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 141 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 196
Query: 503 IVK 505
K
Sbjct: 197 SAK 199
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 231 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + + L GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPN 207
Query: 291 YMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPID 325
Y+ PE + C+ S + D++S G IL LL G P +
Sbjct: 208 YIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ + YLH+ +IHRD+K N+ L+++ K+GDFG+ E + + L GT
Sbjct: 153 QGVQYLHN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPN 207
Query: 526 YMPPEAMHCQI--STKTDVFSYGAQIKT 551
Y+ PE + C+ S + D++S G + T
Sbjct: 208 YIAPEVL-CKKGHSFEVDIWSLGCILYT 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 103
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 161
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 162 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY- 216
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 217 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 256
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 147 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 202
Query: 503 IVK 505
K
Sbjct: 203 SAK 205
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 74
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 75 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 132
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 133 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY- 187
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 188 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 227
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 118 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 173
Query: 503 IVKMSETSNVKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYG 546
K Y +R Y PE + ++ DV+S G
Sbjct: 174 SAKQLVRGEPNVSY----ICSRYYRAPELIFGATDYTSSIDVWSAG 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 217 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 268
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 103 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 269 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + L GT Y+ PE + + S + DV+S G I+ LL G P +
Sbjct: 162 ATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 503
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 103 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQIKT 551
E + + L GT Y+ PE + + S + DV+S G + T
Sbjct: 162 ATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 116 KLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
KLG+G +G V+ + G +AVK + MI L +E
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE------ 69
Query: 175 CKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
VNLL +L N+ +V++YM + + R N P+ +K+Y + + + +
Sbjct: 70 -NIVNLLNVLRADNDRDVYLVFDYM--ETDLHAVIRANILEPV--HKQY-VVYQLIKVIK 123
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNMKTMYTEN----- 284
YLHS ++HRD+K +N+LL+ K+ DFG+ + T+N+ EN
Sbjct: 124 YLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 285 --------LTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPI 324
TR Y PE + + + D++S G IL E+L G KPI
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 28/139 (20%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++ D ET L + R N P+ +K+Y + + + + YLHS ++HRD+K +N
Sbjct: 88 LVFDYMET---DLHAVIRANILEPV--HKQY-VVYQLIKVIKYLHS--GGLLHRDMKPSN 139
Query: 488 VLLDENFVPKLGDFGIVK-----MSETSNVKTMYTEN-------------LTGTRPYMPP 529
+LL+ K+ DFG+ + T+N+ EN TR Y P
Sbjct: 140 ILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199
Query: 530 EAM--HCQISTKTDVFSYG 546
E + + + D++S G
Sbjct: 200 EILLGSTKYTKGIDMWSLG 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +G VY + G A+K + E IP E+ L +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE----------KEDEGIPSTTI-REISILKEL 57
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYM----------CNGSLYDRLARVNNTPPLDSNKRYS 224
KH N+++L + + + V+E++ C G L A+ S
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-------------S 104
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L + + Y H + ++HRD+K N+L++ K+ DFG+ + K YT
Sbjct: 105 FLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHE 160
Query: 285 LTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTG 320
+ T Y P+ + + ST D++S G I E++ G
Sbjct: 161 IV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L+S S L + + Y H + ++HRD+K N+L++ K+ DFG+ +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154
Query: 512 VKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYG 546
K YT + T Y P+ + + ST D++S G
Sbjct: 155 RK--YTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVG 188
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 105
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 106 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 163
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 164 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY- 218
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 219 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 258
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVK 505
+L Y+HS I HRD+K N+LLD + V KL DFG K
Sbjct: 169 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL-GVAEALHYLHSLSKPIIHRDVKSAN 252
+V E M G L D++ R S + S L + + + YLHS + ++HRD+K +N
Sbjct: 98 LVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHS--QGVVHRDLKPSN 151
Query: 253 VL-LDENFVP---KLGDFGIVKMSETSN---MKTMYTENLTGTRPYMPPEAMHCQ-ISTK 304
+L +DE+ P ++ DFG K N M YT N ++ PE + Q
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN------FVAPEVLKRQGYDEG 205
Query: 305 TDVFSYGVILLELLTGMKPI 324
D++S G++L +L G P
Sbjct: 206 CDIWSLGILLYTMLAGYTPF 225
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVL-LDENFVP---KLGDFGIVKMSETSNVKTM---Y 516
+ + + YLHS + ++HRD+K +N+L +DE+ P ++ DFG K N M Y
Sbjct: 130 IGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 517 TENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQIKT 551
T N ++ PE + Q D++S G + T
Sbjct: 188 TAN------FVAPEVLKRQGYDEGCDIWSLGILLYT 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL-GVAEALHYLHSLSKPIIHRDVKSAN 252
+V E M G L D++ R S + S L + + + YLHS + ++HRD+K +N
Sbjct: 98 LVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHS--QGVVHRDLKPSN 151
Query: 253 VL-LDENFVP---KLGDFGIVKMSETSN---MKTMYTENLTGTRPYMPPEAMHCQ-ISTK 304
+L +DE+ P ++ DFG K N M YT N ++ PE + Q
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN------FVAPEVLKRQGYDEG 205
Query: 305 TDVFSYGVILLELLTGMKPI 324
D++S G++L +L G P
Sbjct: 206 CDIWSLGILLYTMLAGYTPF 225
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVL-LDENFVP---KLGDFGIVKMSETSNVKTM---Y 516
+ + + YLHS + ++HRD+K +N+L +DE+ P ++ DFG K N M Y
Sbjct: 130 IGKTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 517 TENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQIKT 551
T N ++ PE + Q D++S G + T
Sbjct: 188 TAN------FVAPEVLKRQGYDEGCDIWSLGILLYT 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 171
Query: 294 PEAMHCQ--ISTKTDVFSYGVILLELLT 319
PE + ST D++S G I E++T
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVT 199
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYG 546
V+T YT + T Y PE + ST D++S G
Sbjct: 157 -VRT-YTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLG 191
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 107
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 108 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 165
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 166 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY- 220
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 221 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 260
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVK 505
+L Y+HS I HRD+K N+LLD + V KL DFG K
Sbjct: 171 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +G VY + G A+K + E IP E+ L +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE----------KEDEGIPSTTI-REISILKEL 57
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYM----------CNGSLYDRLARVNNTPPLDSNKRYS 224
KH N+++L + + + V+E++ C G L A+ S
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-------------S 104
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L + + Y H + ++HRD+K N+L++ K+ DFG+ + K YT
Sbjct: 105 FLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHE 160
Query: 285 LTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTG 320
+ T Y P+ + + ST D++S G I E++ G
Sbjct: 161 VV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L+S S L + + Y H + ++HRD+K N+L++ K+ DFG+ +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154
Query: 512 VKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYG 546
K YT + T Y P+ + + ST D++S G
Sbjct: 155 RK--YTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVG 188
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY-TENLTGTRP 290
L Y+HS +IHRD+K +N+L++EN K+GDFG+ + TS + Y TR
Sbjct: 171 GLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 291 YMPPEAMHC--QISTKTDVFSYGVILLELLT 319
Y PE M + + D++S G I E+L
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++LD E+ Q+ ++++ PL + L Y+HS +IHRD+K +N
Sbjct: 137 VVLDLMESDLHQI-----IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSN 189
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMY-TENLTGTRPYMPPEAMHC--QISTKTDVFS 544
+L++EN K+GDFG+ + TS + Y TR Y PE M + + D++S
Sbjct: 190 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 249
Query: 545 YG 546
G
Sbjct: 250 VG 251
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 217 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 268
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 127 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
Query: 269 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + L GT Y+ PE + + S + DV+S G I+ LL G P +
Sbjct: 186 ATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 503
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 127 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQIKT 551
E + + L GT Y+ PE + + S + DV+S G + T
Sbjct: 186 ATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 231
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
K+GEG +G VY + G A+K + E IP E+ L +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE----------KEDEGIPSTTI-REISILKEL 57
Query: 176 KHVNLLRLLGLCNNIMNCI-VYEYM----------CNGSLYDRLARVNNTPPLDSNKRYS 224
KH N+++L + + + V+E++ C G L A+ S
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-------------S 104
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L + + Y H + ++HRD+K N+L++ K+ DFG+ + K YT
Sbjct: 105 FLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHE 160
Query: 285 LTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTG 320
+ T Y P+ + + ST D++S G I E++ G
Sbjct: 161 VV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
L+S S L + + Y H + ++HRD+K N+L++ K+ DFG+ +
Sbjct: 97 LESVTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154
Query: 512 VKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYG 546
K YT + T Y P+ + + ST D++S G
Sbjct: 155 RK--YTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVG 188
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 148
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 149 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 206
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K Y
Sbjct: 207 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY- 261
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 262 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 301
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 192 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 247
Query: 503 IVK 505
K
Sbjct: 248 SAK 250
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
I+ E M G L+ R+ + + I + A+ +LHS + I HRDVK N+
Sbjct: 84 IIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENL 140
Query: 254 LL---DENFVPKLGDFGIVKMSETSNMKT-MYTENLTGTRPYMPPEAMHCQISTKT-DVF 308
L +++ V KL DFG K + + ++T YT Y+ PE + + K+ D++
Sbjct: 141 LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY------YVAPEVLGPEKYDKSCDMW 194
Query: 309 SYGVILLELLTGMKPIDDNN 328
S GVI+ LL G P N
Sbjct: 195 SLGVIMYILLCGFPPFYSNT 214
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 439 QLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFV 495
+LF + + I + A+ +LHS + I HRDVK N+L +++ V
Sbjct: 93 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAV 150
Query: 496 PKLGDFGIVKMSETSNVKT-MYTENLTGTRPYMPPEAMHCQISTKT-DVFSYG 546
KL DFG K + + ++T YT Y+ PE + + K+ D++S G
Sbjct: 151 LKLTDFGFAKETTQNALQTPCYTPY------YVAPEVLGPEKYDKSCDMWSLG 197
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
F+ E++ + H N++RL +N +V E G L++R+ D+ +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR-- 110
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGIVKMSETSNMKTM 280
I V A+ Y H L+ + HRD+K N L D P KL DFG+ + M M
Sbjct: 111 -IMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--M 165
Query: 281 YTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
T+ GT Y+ P+ + + D +S GV++ LL G P
Sbjct: 166 RTK--VGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
F+ E++ + H N++RL +N +V E G L++R+ D+ +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR-- 127
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLL--DENFVP-KLGDFGIVKMSETSNMKTM 280
I V A+ Y H L+ + HRD+K N L D P KL DFG+ + M M
Sbjct: 128 -IMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--M 182
Query: 281 YTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPI 324
T+ GT Y+ P+ + + D +S GV++ LL G P
Sbjct: 183 RTK--VGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 217 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 268
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 129 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 269 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGVILLELLTGMKPID 325
E + + L GT Y+ PE + + S + DV+S G I+ LL G P +
Sbjct: 188 ATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 452 LDSNKRYSIALGVAEALHYLHSL--------SKPIIHRDVKSANVLLDENFVPKLGDFGI 503
L+ +KR AL EA +YL + +IHRD+K N+ L+E+ K+GDFG+
Sbjct: 129 LELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 504 VKMSETSNVKTMYTENLTGTRPYMPPEAMHCQI-STKTDVFSYGAQIKT 551
E + + L GT Y+ PE + + S + DV+S G + T
Sbjct: 188 ATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
I+ E M G L+ R+ + + I + A+ +LHS + I HRDVK N+
Sbjct: 103 IIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENL 159
Query: 254 LL---DENFVPKLGDFGIVKMSETSNMKT-MYTENLTGTRPYMPPEAMHCQISTKT-DVF 308
L +++ V KL DFG K + + ++T YT Y+ PE + + K+ D++
Sbjct: 160 LYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY------YVAPEVLGPEKYDKSCDMW 213
Query: 309 SYGVILLELLTGMKPIDDNN 328
S GVI+ LL G P N
Sbjct: 214 SLGVIMYILLCGFPPFYSNT 233
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 407 SSRTQENNNINWELHYTGIP--VIILDTGET----KQC-----------QLFKLARVNNT 449
S + ++ + +W+ +G P V ILD E K+C +LF +
Sbjct: 65 SPKARQEVDHHWQA--SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD 122
Query: 450 PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKM 506
+ I + A+ +LHS + I HRDVK N+L +++ V KL DFG K
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180
Query: 507 SETSNVKT-MYTENLTGTRPYMPPEAMHCQISTKT-DVFSYG 546
+ + ++T YT Y+ PE + + K+ D++S G
Sbjct: 181 TTQNALQTPCYTPY------YVAPEVLGPEKYDKSCDMWSLG 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 54
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 55 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 109
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 110 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 186 SSKSDVWSFG 195
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 25/292 (8%)
Query: 41 SMPKSKH-KSASNLVNQHNQKIKFKLPDKK---WLQEVIQQEEANNKTEYIGELIAFTFC 96
S PK H KS+ N+ + F + + W + Q EA E+ F
Sbjct: 297 SFPKPGHRKSSPAQGNRQESTVSFNPYEPELAPWAADKGPQREA---LPMDTEVFESPFA 353
Query: 97 DLE--RATDGF-NRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXX 153
D E R + + +RK +LG G FGTV G + +K +
Sbjct: 354 DPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNE 407
Query: 154 XTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNN 213
+ A+ LL E V + Q + ++R++G+C +V E G L L + N
Sbjct: 408 ANDPALKDELLAEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--N 463
Query: 214 TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MS 272
D N + V+ + YL + +HRD+ + NVLL K+ DFG+ K +
Sbjct: 464 RHVKDKNI-IELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALR 520
Query: 273 ETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
N T + Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 550 SSKSDVWSFG 559
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 13 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 66
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 67 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 121
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 122 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 198 SSKSDVWSFG 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 65
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 123
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 124 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 178
Query: 294 PEAMHCQ--ISTKTDVFSYGVILLELLT 319
PE + ST D++S G I E++T
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVT 206
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 108 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
Query: 511 NVKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYG 546
V+T YT + T Y PE + ST D++S G
Sbjct: 164 -VRT-YTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLG 198
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 21 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 74
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 75 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 129
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 130 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 206 SSKSDVWSFG 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY-TENLTGTRP 290
L Y+HS +IHRD+K +N+L++EN K+GDFG+ + TS + Y TR
Sbjct: 170 GLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 291 YMPPEAMHC--QISTKTDVFSYGVILLELLT 319
Y PE M + + D++S G I E+L
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++LD E+ Q+ ++++ PL + L Y+HS +IHRD+K +N
Sbjct: 136 VVLDLMESDLHQI-----IHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSN 188
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMY-TENLTGTRPYMPPEAMHC--QISTKTDVFS 544
+L++EN K+GDFG+ + TS + Y TR Y PE M + + D++S
Sbjct: 189 LLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248
Query: 545 YG 546
G
Sbjct: 249 VG 250
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 76
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 77 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 131
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 132 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 208 SSKSDVWSFG 217
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 76
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 77 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 131
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 132 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 208 SSKSDVWSFG 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 50/294 (17%)
Query: 116 KLGEGQFGTVYYGK-LKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
++GEG +G V+ + LKNG +A+K + + ++ L
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV--------LRHLE 69
Query: 174 QCKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
+H N++RL +C +V+E++ + L L +V P + + +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE-PGVPTETIKDMMF 127
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNMKTMYT 282
+ L +LHS ++HRD+K N+L+ + KL DFG+ + M+ TS + T++
Sbjct: 128 QLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW- 184
Query: 283 ENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL-YYY 334
Y PE + +T D++S G I E L G +D IL
Sbjct: 185 --------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 335 LVVEQEVPVREVLDKEAG--------EWNETHVETLIGIVFEKCCVFEKDKRAS 380
L E++ P L ++A E T ++ L + KC F KR S
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNVKTMYTENLT 521
L +LHS ++HRD+K N+L+ + KL DFG+ + M+ TS V T++
Sbjct: 132 GLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW----- 184
Query: 522 GTRPYMPPEA-MHCQISTKTDVFSYG 546
Y PE + +T D++S G
Sbjct: 185 ----YRAPEVLLQSSYATPVDLWSVG 206
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 61 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 115
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 116 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 192 SSKSDVWSFG 201
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 3 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 56
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 57 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 111
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 112 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 188 SSKSDVWSFG 197
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 161 PILLFENEVQTLSQCKHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPL 217
PI E+ L + H N+++L+ + ++ +V+E + G + + V PL
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME----VPTLKPL 134
Query: 218 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 277
++ + + + YLH + IIHRD+K +N+L+ E+ K+ DFG+ + S+
Sbjct: 135 SEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD- 191
Query: 278 KTMYTENLTGTRPYMPPEAMHCQ---ISTKT-DVFSYGVILLELLTGMKPIDDNNTI 330
N GT +M PE++ S K DV++ GV L + G P D +
Sbjct: 192 --ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL ++ + + + YLH + IIHRD+K +N+L+ E+ K+ DFG+ + S
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 511 NVKTMYTENLTGTRPYMPPEAM 532
+ N GT +M PE++
Sbjct: 191 DA---LLSNTVGTPAFMAPESL 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG+G F V K G+E A K + E E + +
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----------LEREARICRK 60
Query: 175 CKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+H N++RL + + +V++ + G L++ + D++ + E++
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESI 117
Query: 234 HYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
Y HS I+HR++K N+LL + KL DFG+ E ++ + + GT
Sbjct: 118 AYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GFAGTPG 171
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + +K D+++ GVIL LL G P D +
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 210
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+ E++ Y HS I+HR++K N+LL + KL DFG+ E ++ + +
Sbjct: 113 ILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GF 166
Query: 521 TGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT Y+ PE + +K D+++ G
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACG 193
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 105 FNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILL 164
+RK +LG G FGTV G + +K + + A+ LL
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELL 60
Query: 165 FENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E V + Q + ++R++G+C +V E G L L + N D N
Sbjct: 61 AEANV--MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IE 115
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTE 283
+ V+ + YL + +HRD+ + NVLL K+ DFG+ K + N T
Sbjct: 116 LVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 284 NLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ Y P + + S+K+DV+S+GV++ E + G KP
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 192 SSKSDVWSFG 201
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 43/288 (14%)
Query: 117 LGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G +G+V K G +AVK L ++I E++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHM 78
Query: 176 KHVNLLRLLGLCNNIMNCIVYE--YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++ LL + + + Y+ + L + L + + + L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
Y+HS IIHRD+K +N+ ++E+ K+ DF + + T + T Y TR Y
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGY----VATRWYRA 190
Query: 294 PEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDKE 350
PE M + D++S G I+ ELLTG + I L++ P E+L K
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 351 AGEWNETHVETL------------IGI------VFEKCCVFEKDKRAS 380
+ E ++++L IG + EK V + DKR +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L Y+HS IIHRD+K +N+ ++E+ K+ DF + + T + T Y T
Sbjct: 134 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGY----VAT 185
Query: 524 RPYMPPEAM--HCQISTKTDVFSYG 546
R Y PE M + D++S G
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVG 210
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG+G F V K G+E A K + E E + +
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----------LEREARICRK 61
Query: 175 CKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+H N++RL + + +V++ + G L++ + D++ + E++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESI 118
Query: 234 HYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
Y HS I+HR++K N+LL + KL DFG+ E ++ + + GT
Sbjct: 119 AYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GFAGTPG 172
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + +K D+++ GVIL LL G P D +
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+ E++ Y HS I+HR++K N+LL + KL DFG+ E ++ + +
Sbjct: 114 ILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GF 167
Query: 521 TGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT Y+ PE + +K D+++ G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACG 194
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+K + TE +P E+ L +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLD----------TETEGVPSTAI-REISLLKE 61
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T E +T Y
Sbjct: 120 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLW--YRA 174
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 104 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T E +T Y PE + C+ ST D++S G
Sbjct: 160 -VRTYXHEVVTLW--YRAPEILLGCKYYSTAVDIWSLG 194
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 53/228 (23%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRL---------------LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDS 219
H N++RL L L + + VY + +R T P+
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR------VARHYSRAKQTLPVIY 123
Query: 220 NKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMK 278
K Y L +L Y+HS I HRD+K N+LLD + V KL DFG S ++
Sbjct: 124 VKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVR 175
Query: 279 TMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+ +R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVK 505
K
Sbjct: 169 SAK 171
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG + K E +AVK +E AA + + E+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKI---------AANV-----KREIINHRSL 72
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++R + + IV EY G L++R+ N ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS 129
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNMKTMYTENLTGTRPYM 292
Y H++ + HRD+K N LLD + P+L DFG K S++ ++ GT Y+
Sbjct: 130 YCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYI 183
Query: 293 PPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 326
PE + + DV+S GV L +L G P +D
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNVKTMYTENLTGTR 524
+ Y H++ + HRD+K N LLD + P+L DFG K S+V ++ GT
Sbjct: 127 GVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTP 180
Query: 525 PYMPPEAM 532
Y+ PE +
Sbjct: 181 AYIAPEVL 188
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDK 349
PE + D++S GVI+ E++ G + I + V+EQ P E + K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-K 250
Query: 350 EAGEWNETHVET---LIGIVFEKC---CVFEKDK---RASMRDIVDLLSKSMFVCNS 397
+ T+VE G FEK +F D + DLLSK + + S
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYGA 547
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGV 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDK 349
PE + D++S GVI+ E++ G + I + V+EQ P E + K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-K 250
Query: 350 EAGEWNETHVET---LIGIVFEKC---CVFEKDK---RASMRDIVDLLSKSMFVCNS 397
+ T+VE G FEK +F D + DLLSK + + S
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYGA 547
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGV 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 100/241 (41%), Gaps = 37/241 (15%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG G FG V+ + K G + AVK + + +F E L
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-------------------LEVFRAE--ELMA 138
Query: 175 CKHVNLLRLLGLCNNIMNC----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
C + R++ L + I E + GSL +L + P D Y LG A
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY---LGQA 194
Query: 231 -EALHYLHSLSKPIIHRDVKSANVLLDENFV-PKLGDFG-IVKMSETSNMKTMYTEN-LT 286
E L YLHS + I+H DVK+ NVLL + L DFG V + K++ T + +
Sbjct: 195 LEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 287 GTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
GT +M PE + K DV+S ++L +L G P + + PVRE
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 312
Query: 346 V 346
+
Sbjct: 313 I 313
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 462 LGVA-EALHYLHSLSKPIIHRDVKSANVLLDENFV-PKLGDFG-IVKMSETSNVKTMYTE 518
LG A E L YLHS + I+H DVK+ NVLL + L DFG V + K++ T
Sbjct: 191 LGQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 519 N-LTGTRPYMPPE-AMHCQISTKTDVFS 544
+ + GT +M PE + K DV+S
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWS 276
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+LG G FGTV G + +K + + A+ LL E V + Q
Sbjct: 377 ELGSGNFGTVKKGYYQ------MKKVVKTVAVKILKNEANDPALKDELLAEANV--MQQL 428
Query: 176 KHVNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY 235
+ ++R++G+C +V E G L L + N D N + V+ + Y
Sbjct: 429 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNI-IELVHQVSMGMKY 485
Query: 236 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNMKTMYTENLTGTRPYMPP 294
L + +HRD+ + NVLL K+ DFG+ K + N T + Y P
Sbjct: 486 LEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 295 EAMHCQISTKTDVFSYGVILLELLT-GMKP 323
+ + S+K+DV+S+GV++ E + G KP
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 478 IIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTRPYMPPEAMHCQI 536
+HRD+ + NVLL K+ DFG+ K + N T + Y P + +
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 537 STKTDVFSYG 546
S+K+DV+S+G
Sbjct: 551 SSKSDVWSFG 560
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 41/218 (18%)
Query: 117 LGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQC 175
+G G FG V+ KL E+A+K + F+N E+Q +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKR------------------FKNRELQIMRIV 89
Query: 176 KHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLY---DRLARVNNTPPLDSNKRYSI 225
KH N++ L + + +V EY+ ++Y A++ T P+ K Y
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMY 148
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS+ I HRD+K N+LLD + V KL DFG K+ +
Sbjct: 149 QL--LRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV----S 200
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTG 320
+R Y PE + +T D++S G ++ EL+ G
Sbjct: 201 XICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
A++ T P+ K Y L +L Y+HS+ I HRD+K N+LLD + V KL DFG
Sbjct: 132 AKLKQTMPMLLIKLYMYQL--LRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFG 187
Query: 503 IVK--MSETSNVKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYG 546
K ++ NV + +R Y PE + +T D++S G
Sbjct: 188 SAKILIAGEPNVSXI------CSRYYRAPELIFGATNYTTNIDIWSTG 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG+G F V K G+E A K + E E + +
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----------LEREARICRK 61
Query: 175 CKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+H N++RL + + +V++ + G L++ + D++ + E++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESI 118
Query: 234 HYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
Y HS I+HR++K N+LL + KL DFG+ E ++ + + GT
Sbjct: 119 AYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GFAGTPG 172
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + +K D+++ GVIL LL G P D +
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+ E++ Y HS I+HR++K N+LL + KL DFG+ E ++ + +
Sbjct: 114 ILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GF 167
Query: 521 TGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT Y+ PE + +K D+++ G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACG 194
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDEN--FVPKLGDFGIVKMSETSNMKTMYTENLT 286
+ ALHYLH+ + I HRD+K N L N F KL DFG+ K N Y
Sbjct: 177 IFSALHYLHN--QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK 234
Query: 287 GTRPY-MPPEAMHC---QISTKTDVFSYGVILLELLTGMKP---IDDNNTI 330
PY + PE ++ K D +S GV+L LL G P ++D +TI
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDEN--FVPKLGDFGIVKMSETSNVKTMYTENLT 521
+ ALHYLH+ + I HRD+K N L N F KL DFG+ K N Y
Sbjct: 177 IFSALHYLHN--QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK 234
Query: 522 GTRPY-MPPEAMHC---QISTKTDVFSYGA 547
PY + PE ++ K D +S G
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 50/294 (17%)
Query: 116 KLGEGQFGTVYYGK-LKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
++GEG +G V+ + LKNG +A+K + + ++ L
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV--------LRHLE 69
Query: 174 QCKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
+H N++RL +C +V+E++ + L L +V P + + +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE-PGVPTETIKDMMF 127
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNMKTMYT 282
+ L +LHS ++HRD+K N+L+ + KL DFG+ + M+ TS + T++
Sbjct: 128 QLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW- 184
Query: 283 ENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL-YYY 334
Y PE + +T D++S G I E L G +D IL
Sbjct: 185 --------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 335 LVVEQEVPVREVLDKEAG--------EWNETHVETLIGIVFEKCCVFEKDKRAS 380
L E++ P L ++A E T ++ L + KC F KR S
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNVKTMYTENLT 521
L +LHS ++HRD+K N+L+ + KL DFG+ + M+ TS V T++
Sbjct: 132 GLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW----- 184
Query: 522 GTRPYMPPEA-MHCQISTKTDVFSYG 546
Y PE + +T D++S G
Sbjct: 185 ----YRAPEVLLQSSYATPVDLWSVG 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+ + TE +P E+ L +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLD----------TETEGVPSTAI-REISLLKE 58
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 171
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 101 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 157 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 191
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 116 KLGEGQFGTVYYGKLK-NGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
K+GEG +G VY + K G +A+ + TE +P E+ L +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLD----------TETEGVPSTAI-REISLLKE 57
Query: 175 CKHVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
H N+++LL + + +V+E++ A PL K Y L + L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 115
Query: 234 HYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMP 293
+ HS ++HRD+K N+L++ KL DFG+ + ++T YT + T Y
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRT-YTHEVV-TLWYRA 170
Query: 294 PEA-MHCQ-ISTKTDVFSYGVILLELLT 319
PE + C+ ST D++S G I E++T
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 451 PLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETS 510
PL K Y L + L + HS ++HRD+K N+L++ KL DFG+ +
Sbjct: 100 PLPLIKSYLFQL--LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
Query: 511 NVKTMYTENLTGTRPYMPPEA-MHCQ-ISTKTDVFSYG 546
V+T YT + T Y PE + C+ ST D++S G
Sbjct: 156 -VRT-YTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLG 190
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 50/294 (17%)
Query: 116 KLGEGQFGTVYYGK-LKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
++GEG +G V+ + LKNG +A+K + + ++ L
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV--------LRHLE 69
Query: 174 QCKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
+H N++RL +C +V+E++ + L L +V P + + +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPE-PGVPTETIKDMMF 127
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNMKTMYT 282
+ L +LHS ++HRD+K N+L+ + KL DFG+ + M+ TS + T++
Sbjct: 128 QLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW- 184
Query: 283 ENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL-YYY 334
Y PE + +T D++S G I E L G +D IL
Sbjct: 185 --------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 335 LVVEQEVPVREVLDKEAG--------EWNETHVETLIGIVFEKCCVFEKDKRAS 380
L E++ P L ++A E T ++ L + KC F KR S
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNVKTMYTENLT 521
L +LHS ++HRD+K N+L+ + KL DFG+ + M+ TS V T++
Sbjct: 132 GLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW----- 184
Query: 522 GTRPYMPPEA-MHCQISTKTDVFSYG 546
Y PE + +T D++S G
Sbjct: 185 ----YRAPEVLLQSSYATPVDLWSVG 206
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 81
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 139
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++
Sbjct: 140 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPN 191
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+ +R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 234
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 125 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 180
Query: 503 IVK 505
K
Sbjct: 181 SAK 183
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 88
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 89 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 149 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 200
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 201 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 241
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 132 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 187
Query: 503 IVK 505
K
Sbjct: 188 SAK 190
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 77
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 78 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 138 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 189
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 190 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 230
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 121 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 176
Query: 503 IVK 505
K
Sbjct: 177 SAK 179
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 130 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 181
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVK 505
K
Sbjct: 169 SAK 171
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 81
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 142 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 193
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 234
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 125 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 180
Query: 503 IVK 505
K
Sbjct: 181 SAK 183
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG + K E +AVK +E + E+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN--------------VKREIINHRSL 71
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++R + + IV EY G L++R+ N ++ + +
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS 128
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNMKTMYTENLTGTRPYM 292
Y H++ + HRD+K N LLD + P+L DFG K S++ ++ GT Y+
Sbjct: 129 YCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYI 182
Query: 293 PPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 326
PE + + DV+S GV L +L G P +D
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNVKTMYTENLTGTR 524
+ Y H++ + HRD+K N LLD + P+L DFG K S+V ++ GT
Sbjct: 126 GVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTP 179
Query: 525 PYMPPEAM 532
Y+ PE +
Sbjct: 180 AYIAPEVL 187
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNCIVYEYM--CNGSLYDRLARVNNTPPLDSNKRY 223
+ E+Q L + +H N+++L+ + N +Y M C + + L V KR+
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV-------PEKRF 106
Query: 224 SIALG------VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSN 276
+ + + L YLHS + I+H+D+K N+LL K+ G+ + + +
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164
Query: 277 MKTMYTENLTGTRPYMPPE---AMHCQISTKTDVFSYGVILLELLTGMKPIDDNN 328
T T G+ + PPE + K D++S GV L + TG+ P + +N
Sbjct: 165 DDTCRTSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-MSETSNVKTMYTENLTGTR 524
+ L YLHS + I+H+D+K N+LL K+ G+ + + + T T G+
Sbjct: 120 DGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--GSP 175
Query: 525 PYMPPE---AMHCQISTKTDVFSYGAQI 549
+ PPE + K D++S G +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTL 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 303 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 355
Query: 292 MPPEAMHCQIS--TKTDVFSYGVILLELLTGMKPIDDNNT 329
M PE + ++ + D FS G +L +LL G P + T
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 303 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 355
Query: 527 MPPEAMHCQIS--TKTDVFSYGAQI 549
M PE + ++ + D FS G +
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCML 380
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 356
Query: 292 MPPEAMHCQIS--TKTDVFSYGVILLELLTGMKPIDDNNT 329
M PE + ++ + D FS G +L +LL G P + T
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 356
Query: 527 MPPEAMHCQIS--TKTDVFSYGAQI 549
M PE + ++ + D FS G +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCML 381
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 165 FENEVQTLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
F +S+ H +L+ G+C N +V E++ GSL L + N ++ +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKL 116
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTE 283
+A +A A+H+L +IH +V + N+LL K G+ +K+S+ T+ +
Sbjct: 117 EVAKQLAAAMHFLEE--NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK 174
Query: 284 NLTGTR-PYMPPEAMHC--QISTKTDVFSYGVILLELLTGM-KPID--DNNTILYYYLVV 337
++ R P++PPE + ++ TD +S+G L E+ +G KP+ D+ L +Y
Sbjct: 175 DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR 234
Query: 338 EQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
Q +P + + + + C +E D R S R I+
Sbjct: 235 HQ-LPAPKAAE--------------LANLINNCMDYEPDHRPSFRAII 267
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 457 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMY 516
+ +A +A A+H+L +IH +V + N+LL K G+ +K+S+ T+
Sbjct: 115 KLEVAKQLAAAMHFLEE--NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 517 TENLTGTR-PYMPPEAMHC--QISTKTDVFSYGAQI------KTQHITNVDIADRERYYS 567
+++ R P++PPE + ++ TD +S+G + + ++ +D + ++Y
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232
Query: 568 LQTMLPGHHEGDHVSISNH 586
+ LP + ++ N+
Sbjct: 233 DRHQLPAPKAAELANLINN 251
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 130 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 181
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVK 505
K
Sbjct: 169 SAK 171
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 70
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 71 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 131 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 182
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 223
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 114 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 169
Query: 503 IVK 505
K
Sbjct: 170 SAK 172
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 356
Query: 292 MPPEAMHCQIS--TKTDVFSYGVILLELLTGMKPIDDNNT 329
M PE + ++ + D FS G +L +LL G P + T
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 356
Query: 527 MPPEAMHCQIS--TKTDVFSYGAQI 549
M PE + ++ + D FS G +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCML 381
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 356
Query: 292 MPPEAMHCQIS--TKTDVFSYGVILLELLTGMKPIDDNNT 329
M PE + ++ + D FS G +L +LL G P + T
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L ++H+ + +++RD+K AN+LLDE+ ++ D G+ + S K + GT Y
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHGY 356
Query: 527 MPPEAMHCQIS--TKTDVFSYGAQI 549
M PE + ++ + D FS G +
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCML 381
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 37/166 (22%)
Query: 173 SQCKHVNLLRLLGLCNNI---MNC--IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 227
SQC H+ +R++ + N+ C IV E + G L+ R+ + + I
Sbjct: 68 SQCPHI--VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMK 124
Query: 228 GVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ EA+ YLHS++ I HRDVK N+L N + KL DFG K ET+ K
Sbjct: 125 SIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTGEK------ 174
Query: 285 LTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI 330
D++S GVI+ LL G P N+ +
Sbjct: 175 ----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGL 204
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 430 LDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 489
LD GE LF + + I + EA+ YLHS++ I HRDVK N+L
Sbjct: 97 LDGGE-----LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLL 149
Query: 490 LDE---NFVPKLGDFGIVK 505
N + KL DFG K
Sbjct: 150 YTSKRPNAILKLTDFGFAK 168
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 167 NEVQTLSQCKHVNLLRLLGLC--NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
E++ L +H N++ LL + + ++ Y+ + L ++ L ++
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF 132
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTEN 284
+ + + L Y+H+ IIHRD+K N+ ++E+ K+ DFG+ + +++ +
Sbjct: 133 LVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV--- 187
Query: 285 LTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTG 320
TR Y PE + + + D++S G I+ E++TG
Sbjct: 188 ---TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRP 525
+ L Y+H+ IIHRD+K N+ ++E+ K+ DFG+ + +++ + TR
Sbjct: 139 KGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV------TRW 190
Query: 526 YMPPEAM--HCQISTKTDVFSYG 546
Y PE + + + D++S G
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVG 213
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 103
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNGSLYDRLAR----VNNTPPLDSNKRY 223
H N++RL + + +V +Y+ ++Y R+AR T P+ K Y
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVY-RVARHYSRAKQTLPVIYVKLY 161
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYT 282
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++
Sbjct: 162 MYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPN 213
Query: 283 ENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+ +R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 214 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 256
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVK 505
+L Y+HS I HRD+K N+LLD + V KL DFG K
Sbjct: 167 RSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 165 FENEVQTLSQCKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
F +S+ H +L+ G+C N +V E++ GSL L + N ++ +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKL 116
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTE 283
+A +A A+H+L +IH +V + N+LL K G+ +K+S+ T+ +
Sbjct: 117 EVAKQLAWAMHFLEE--NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK 174
Query: 284 NLTGTR-PYMPPEAMHC--QISTKTDVFSYGVILLELLTGM-KPID--DNNTILYYYLVV 337
++ R P++PPE + ++ TD +S+G L E+ +G KP+ D+ L +Y
Sbjct: 175 DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR 234
Query: 338 EQEVPVREVLDKEAGEWNETHVETLIGIVFEKCCVFEKDKRASMRDIV 385
Q +P + + + + C +E D R S R I+
Sbjct: 235 HQ-LPAPKAAE--------------LANLINNCMDYEPDHRPSFRAII 267
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 457 RYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMY 516
+ +A +A A+H+L +IH +V + N+LL K G+ +K+S+ T+
Sbjct: 115 KLEVAKQLAWAMHFLEE--NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 517 TENLTGTR-PYMPPEAMHC--QISTKTDVFSYGAQI------KTQHITNVDIADRERYYS 567
+++ R P++PPE + ++ TD +S+G + + ++ +D + ++Y
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232
Query: 568 LQTMLPGHHEGDHVSISNH 586
+ LP + ++ N+
Sbjct: 233 DRHQLPAPKAAELANLINN 251
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 99/241 (41%), Gaps = 37/241 (15%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG G FG V+ + K G + AVK + + +F E L
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-------------------LEVFRAE--ELMA 119
Query: 175 CKHVNLLRLLGLCNNIMNC----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
C + R++ L + I E + GSL +L + P D Y LG A
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY---LGQA 175
Query: 231 -EALHYLHSLSKPIIHRDVKSANVLLDENFV-PKLGDFG-IVKMSETSNMKTMYTEN-LT 286
E L YLHS + I+H DVK+ NVLL + L DFG V + K + T + +
Sbjct: 176 LEGLEYLHS--RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 287 GTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 345
GT +M PE + K DV+S ++L +L G P + + PVRE
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 346 V 346
+
Sbjct: 294 I 294
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 440 LFKLARVNNTPPLDSNKRYSIALGVA-EALHYLHSLSKPIIHRDVKSANVLLDENFV-PK 497
L +L + P D Y LG A E L YLHS + I+H DVK+ NVLL +
Sbjct: 153 LGQLVKEQGCLPEDRALYY---LGQALEGLEYLHS--RRILHGDVKADNVLLSSDGSHAA 207
Query: 498 LGDFG-IVKMSETSNVKTMYTEN-LTGTRPYMPPE-AMHCQISTKTDVFS 544
L DFG V + K + T + + GT +M PE + K DV+S
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 73
Query: 175 CKHVNLLRLLGLC-------NNIMNCIVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL + + +V +Y+ + +R T P+ K Y
Sbjct: 74 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG K ++ +
Sbjct: 134 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVS 185
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 226
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 117 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 172
Query: 503 IVK 505
K
Sbjct: 173 SAK 175
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 25/220 (11%)
Query: 115 NKLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLS 173
+LG+G F V K+ G E A K + A I LL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL--------- 78
Query: 174 QCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
KH N++RL + + ++++ + G L++ + D++ L EA
Sbjct: 79 --KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL---EA 133
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIVKMSETSNMKTMYTENLTGTR 289
+ + H + ++HRD+K N+LL KL DFG+ E GT
Sbjct: 134 VLHCHQMG--VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF---GFAGTP 188
Query: 290 PYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + K D+++ GVIL LL G P D +
Sbjct: 189 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 228
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIVKMSETSNVKTMYTENL 520
+ EA+ + H + ++HRD+K N+LL KL DFG+ E
Sbjct: 130 ILEAVLHCHQMG--VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF---GF 184
Query: 521 TGTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 185 AGTPGYLSPEVL 196
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG+G F V K G+E A K + E E + +
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-----------LEREARICRK 84
Query: 175 CKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
+H N++RL + + +V++ + G L++ + D++ L E++
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESI 141
Query: 234 HYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
Y HS I+HR++K N+LL + KL DFG+ E ++ + + GT
Sbjct: 142 AYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GFAGTPG 195
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPI-DDNNTILY 332
Y+ PE + +K D+++ GVIL LL G P D++ LY
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+ E++ Y HS I+HR++K N+LL + KL DFG+ E ++ + +
Sbjct: 137 ILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH--GF 190
Query: 521 TGTRPYMPPEAMHCQISTK-TDVFSYG 546
GT Y+ PE + +K D+++ G
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACG 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 117 LGEGQFGTVYYGKL-KNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFEN-EVQTLSQ 174
+G G FG VY KL +G +A+K + F+N E+Q + +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------------FKNRELQIMRK 69
Query: 175 CKHVNLLRLL------GLCNNIMNC-IVYEYMCNG--SLYDRLARVNNTPPLDSNKRYSI 225
H N++RL G +++ +V +Y+ + +R T P+ K Y
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 226 ALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKMSETSNMKTMYTEN 284
L +L Y+HS I HRD+K N+LLD + V KL DFG S ++ +
Sbjct: 130 QL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVS 181
Query: 285 LTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPI 324
+R Y PE + ++ DV+S G +L ELL G +PI
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 222
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 444 ARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 502
+R T P+ K Y L +L Y+HS I HRD+K N+LLD + V KL DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQL--FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 503 IVK 505
K
Sbjct: 169 SAK 171
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 168 EVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
E+QT+S +H L+ L ++ ++YE+M G L++++A +N D Y
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--M 155
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLL--DENFVPKLGDFGIVK-MSETSNMKTMYTE 283
V + L ++H + +H D+K N++ + KL DFG+ + ++K
Sbjct: 156 RQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--- 210
Query: 284 NLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPIDDNN 328
TGT + PE + + TD++S GV+ LL+G+ P N
Sbjct: 211 --TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 165 FENEVQTLSQCKHVN--LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ NE+ L++ + + ++RL I + +Y M G++ D + + +D +R
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI-DLNSWLKKKKSIDPWER 157
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
S + EA+H +H I+H D+K AN L+ + + KL DFGI + + ++
Sbjct: 158 KSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQP-DTTSVVK 213
Query: 283 ENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKPI 324
++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 152 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQP-D 207
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTK 539
++ ++ GT YMPPEA+ S++
Sbjct: 208 TTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 165 FENEVQTLSQCKHVN--LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ NE+ L++ + + ++RL I + +Y M G++ D + + +D +R
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI-DLNSWLKKKKSIDPWER 129
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
S + EA+H +H I+H D+K AN L+ + + KL DFGI + + ++
Sbjct: 130 KSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVK 185
Query: 283 ENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKP 323
++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 124 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PD 179
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTK 539
++ ++ GT YMPPEA+ S++
Sbjct: 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 168 EVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIA 226
E+QT+S +H L+ L ++ ++YE+M G L++++A +N D Y
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--M 261
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLL--DENFVPKLGDFGIVK-MSETSNMKTMYTE 283
V + L ++H + +H D+K N++ + KL DFG+ + ++K
Sbjct: 262 RQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--- 316
Query: 284 NLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPIDDNN 328
TGT + PE + + TD++S GV+ LL+G+ P N
Sbjct: 317 --TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 165 FENEVQTLSQCKHVN--LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ NE+ L++ + + ++RL I + +Y M G++ D + + +D +R
Sbjct: 54 YRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI-DLNSWLKKKKSIDPWER 110
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
S + EA+H +H I+H D+K AN L+ + + KL DFGI + + ++
Sbjct: 111 KSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQP-DTTSVVK 166
Query: 283 ENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKPI 324
++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 105 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQP-D 160
Query: 512 VKTMYTENLTGTRPYMPPEAM 532
++ ++ GT YMPPEA+
Sbjct: 161 TTSVVKDSQVGTVNYMPPEAI 181
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 165 FENEVQTLSQCKHVN--LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ NE+ L++ + + ++RL I + +Y M G++ D + + +D +R
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI-DLNSWLKKKKSIDPWER 157
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
S + EA+H +H I+H D+K AN L+ + + KL DFGI + + ++
Sbjct: 158 KSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQP-DTTSVVK 213
Query: 283 ENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKPI 324
++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 152 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQP-D 207
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTK 539
++ ++ GT YMPPEA+ S++
Sbjct: 208 TTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 108 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PD 163
Query: 277 MKTMYTENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKP 323
++ ++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 164 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 108 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PD 163
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTK 539
++ ++ GT YMPPEA+ S++
Sbjct: 164 TTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + T+ M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY----VVTRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
PE + + D++S G I+ EL+ G + I + V+EQ
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQ 240
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + T+ + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY----VVTRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + + D++S G
Sbjct: 192 RAPEVILGMGYAANVDIWSVG 212
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 165 FENEVQTLSQCKHVN--LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKR 222
+ NE+ L++ + + ++RL I + +Y M G++ D + + +D +R
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDY--EITDQYIYMVMECGNI-DLNSWLKKKKSIDPWER 129
Query: 223 YSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 282
S + EA+H +H I+H D+K AN L+ + + KL DFGI + + +
Sbjct: 130 KSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDXXXVVK 185
Query: 283 ENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKP 323
++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 124 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PD 179
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQISTK 539
+ ++ GT YMPPEA+ S++
Sbjct: 180 XXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 104 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PD 159
Query: 277 MKTMYTENLTGTRPYMPPEAMHCQISTK------------TDVFSYGVILLELLTGMKP 323
++ ++ GT YMPPEA+ S++ +DV+S G IL + G P
Sbjct: 160 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
+D +R S + EA+H +H I+H D+K AN L+ + + KL DFGI + +
Sbjct: 104 IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PD 159
Query: 512 VKTMYTENLTGTRPYMPPEAM 532
++ ++ GT YMPPEA+
Sbjct: 160 TTSVVKDSQVGTVNYMPPEAI 180
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E E + KH N++RL + + +V++ + G L++ + D++
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--- 133
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMKTM 280
+ E+++++H I+HRD+K N+LL + KL DFG+ +
Sbjct: 134 HCIHQILESVNHIHQ--HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF 191
Query: 281 YTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
GT Y+ PE + K D+++ GVIL LL G P D +
Sbjct: 192 ---GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDED 237
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNVKTMYTENL 520
+ E+++++H I+HRD+K N+LL + KL DFG+ E + +
Sbjct: 139 ILESVNHIHQ--HDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWF-GF 193
Query: 521 TGTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 194 AGTPGYLSPEVL 205
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + T+ M T Y TR Y
Sbjct: 136 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY----VVTRYY 189
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
PE + D++S G I+ EL+ G + I + V+EQ
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + T+ + T Y TR Y
Sbjct: 136 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY----VVTRYY 189
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + D++S G
Sbjct: 190 RAPEVILGMGYKENVDIWSVG 210
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 86/218 (39%), Gaps = 28/218 (12%)
Query: 116 KLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
KL E G ++ G+ + G +I VK L+ F E L
Sbjct: 17 KLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRD-----------FNEECPRLRIF 64
Query: 176 KHVNLLRLLGLCNNIMN---CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEA 232
H N+L +LG C + ++ + GSLY+ L N +D ++ AL A
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFV-VDQSQAVKFALDXARG 123
Query: 233 LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYM 292
+LH+L I + S +V +DE+ ++ VK S S + ++
Sbjct: 124 XAFLHTLEPLIPRHALNSRSVXIDEDXTARISX-ADVKFSFQSPGRXYAPA-------WV 175
Query: 293 PPEAMHCQIS----TKTDVFSYGVILLELLTGMKPIDD 326
PEA+ + D +S+ V+L EL+T P D
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFAD 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 116 KLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG+G F V K+ G E A K + A I LL
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL---------- 60
Query: 175 CKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++RL + + +V++ + G L++ + D++ + E++
Sbjct: 61 -KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESV 116
Query: 234 HYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
++ H I+HRD+K N+LL + KL DFG+ + + + + GT
Sbjct: 117 NHCHL--NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWF--GFAGTPG 171
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + K D+++ GVIL LL G P D +
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 478 IIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
I+HRD+K N+LL + KL DFG+ + + + + GT Y+ PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWF--GFAGTPGYLSPEVL 178
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 192
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDK 349
PE + D++S G I+ E++ G + I + V+EQ P E + K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
I+++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 107 IVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 157
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVG 213
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDK 349
PE + D++S G I+ E++ G + I + V+EQ P E + K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
I+++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 106 IVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 156
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V E G L D++ R + ++ + + + YLH+ + ++HRD+K +N+
Sbjct: 93 VVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA--QGVVHRDLKPSNI 147
Query: 254 L-LDENFVP---KLGDFGIVKMSETSN---MKTMYTENLTGTRPYMPPEAMHCQ-ISTKT 305
L +DE+ P ++ DFG K N YT N ++ PE + Q
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN------FVAPEVLERQGYDAAC 201
Query: 306 DVFSYGVILLELLTGMKPI 324
D++S GV+L LTG P
Sbjct: 202 DIWSLGVLLYTXLTGYTPF 220
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 459 SIALGVAEALHYLHSLSKPIIHRDVKSANVL-LDENFVP---KLGDFGIVKMSETSN--- 511
++ + + + YLH+ + ++HRD+K +N+L +DE+ P ++ DFG K N
Sbjct: 120 AVLFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 512 VKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGAQIKT 551
YT N ++ PE + Q D++S G + T
Sbjct: 178 XTPCYTAN------FVAPEVLERQGYDAACDIWSLGVLLYT 212
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDK 349
PE + D++S G I+ E++ G + I + V+EQ P E + K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-K 250
Query: 350 EAGEWNETHVET---LIGIVFEKC---CVFEKDK---RASMRDIVDLLSKSMFVCNS 397
+ T+VE G FEK +F D + DLLSK + + S
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVG 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
PE + D++S G I+ E++ G + I + V+EQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
I+++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 106 IVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 156
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVLDK 349
PE + D++S G I+ E++ G + I + V+EQ P E + K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-K 250
Query: 350 EAGEWNETHVET---LIGIVFEKC---CVFEKDK---RASMRDIVDLLSKSMFVCNS 397
+ T+VE G FEK +F D + DLLSK + + S
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVG 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG G FG V+ K K G + AVK + L V+ L
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKK---------------------VRLEVFRVEELVA 117
Query: 175 CKHVNLLRLLGLCNNIMNC----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
C ++ R++ L + I E + GSL + ++ P R LG A
Sbjct: 118 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP----EDRALYYLGQA 173
Query: 231 -EALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNM-KTMYTEN-LT 286
E L YLH+ + I+H DVK+ NVLL + L DFG + + K++ T + +
Sbjct: 174 LEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 287 GTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKP 323
GT +M PE M K D++S ++L +L G P
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 462 LGVA-EALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNV-KTMYTE 518
LG A E L YLH+ + I+H DVK+ NVLL + L DFG + + K++ T
Sbjct: 170 LGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 519 N-LTGTRPYMPPE-AMHCQISTKTDVFS 544
+ + GT +M PE M K D++S
Sbjct: 228 DYIPGTETHMAPEVVMGKPCDAKVDIWS 255
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 112 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQT 171
RR KLGEG +G VY A+ T+ E +P EV
Sbjct: 37 RRITKLGEGTYGEVYK---------AIDTVTNETVAIKRIRLEHEEEGVPGTAI-REVSL 86
Query: 172 LSQCKHVNLLRLLGLCN-NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
L + +H N++ L + + N +++EY N D ++ P + S +
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLI 142
Query: 231 EALHYLHSLSKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNMKTMYTENL 285
+++ HS + +HRD+K N+LL E V K+GDFG+ + + +T +
Sbjct: 143 NGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ--FTHEI 198
Query: 286 TGTRPYMPPEAM--HCQISTKTDVFSYGVILLELL 318
T Y PPE + ST D++S I E+L
Sbjct: 199 I-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 475 SKPIIHRDVKSANVLL-----DENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPP 529
S+ +HRD+K N+LL E V K+GDFG+ + ++ E +T Y PP
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP-IRQFTHEIITLW--YRPP 206
Query: 530 EAM--HCQISTKTDVFS 544
E + ST D++S
Sbjct: 207 EILLGSRHYSTSVDIWS 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 116 KLGEGQFGTVYYG-KLKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
+LG+G F V K+ G E A K + A I LL
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL---------- 60
Query: 175 CKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL 233
KH N++RL + + +V++ + G L++ + D++ + E++
Sbjct: 61 -KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESV 116
Query: 234 HYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP 290
++ H I+HRD+K N+LL + KL DFG+ + + + + GT
Sbjct: 117 NHCHL--NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWF--GFAGTPG 171
Query: 291 YMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
Y+ PE + K D+++ GVIL LL G P D +
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 478 IIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEAM 532
I+HRD+K N+LL + KL DFG+ + + + + GT Y+ PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWF--GFAGTPGYLSPEVL 178
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
PE + D++S G I+ E++ G + I + V+EQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVG 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
PE + D++S G I+ E++ G + I + V+EQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVG 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G G +GTVY + +G +A+K++ + ++ L
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL--------LRRLEA 62
Query: 175 CKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPP--LDSNKRYSIA 226
+H N++RL+ +C I +V+E++ D ++ PP L + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETIKDLM 118
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
L +LH+ I+HRD+K N+L+ KL DFG+ ++ M + +
Sbjct: 119 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALDPVV 172
Query: 287 GTRPYMPPEA-MHCQISTKTDVFSYGVILLELL 318
T Y PE + +T D++S G I E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L +LH+ I+HRD+K N+L+ KL DFG+ ++ M + + T Y
Sbjct: 124 GLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALDPVVVTLWY 177
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + +T D++S G
Sbjct: 178 RAPEVLLQSTYATPVDMWSVG 198
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 18/144 (12%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V+E M GS+ + + + L+++ + VA AL +LH+ K I HRD+K N+
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEAS---VVVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 254 LLDE--NFVP-KLGDFGI---VKM-SETSNMKTMYTENLTGTRPYMPPEAMHC------Q 300
L + P K+ DFG+ +K+ + S + T G+ YM PE +
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 301 ISTKTDVFSYGVILLELLTGMKPI 324
+ D++S GVIL LL+G P
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPF 226
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDE--NFVP-KLGDFGI---VKM-SETSNVKTMY 516
VA AL +LH+ K I HRD+K N+L + P K+ DFG+ +K+ + S + T
Sbjct: 120 VASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 517 TENLTGTRPYMPPEAM 532
G+ YM PE +
Sbjct: 178 LLTPCGSAEYMAPEVV 193
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 193 CIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 251
C+V M G + + V+ + P + + L +LH + II+RD+K
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--RNIIYRDLKPE 318
Query: 252 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSY 310
NVLLD++ ++ D G+ + K T+ GT +M PE + + D F+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 311 GVILLELLTGMKPI 324
GV L E++ P
Sbjct: 376 GVTLYEMIAARGPF 389
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L +LH + II+RD+K NVLLD++ ++ D G+ + K T+ GT
Sbjct: 298 IVSGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGT 352
Query: 524 RPYMPPEAM 532
+M PE +
Sbjct: 353 PGFMAPELL 361
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 193 CIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 251
C+V M G + + V+ + P + + L +LH + II+RD+K
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--RNIIYRDLKPE 318
Query: 252 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSY 310
NVLLD++ ++ D G+ + K T+ GT +M PE + + D F+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 311 GVILLELLTGMKPI 324
GV L E++ P
Sbjct: 376 GVTLYEMIAARGPF 389
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L +LH + II+RD+K NVLLD++ ++ D G+ + K T+ GT
Sbjct: 298 IVSGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGT 352
Query: 524 RPYMPPEAM 532
+M PE +
Sbjct: 353 PGFMAPELL 361
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 193 CIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 251
C+V M G + + V+ + P + + L +LH + II+RD+K
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--RNIIYRDLKPE 318
Query: 252 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSY 310
NVLLD++ ++ D G+ + K T+ GT +M PE + + D F+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 311 GVILLELLTGMKPI 324
GV L E++ P
Sbjct: 376 GVTLYEMIAARGPF 389
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L +LH + II+RD+K NVLLD++ ++ D G+ + K T+ GT
Sbjct: 298 IVSGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGT 352
Query: 524 RPYMPPEAM 532
+M PE +
Sbjct: 353 PGFMAPELL 361
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 193 CIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 251
C+V M G + + V+ + P + + L +LH + II+RD+K
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--RNIIYRDLKPE 318
Query: 252 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSY 310
NVLLD++ ++ D G+ + K T+ GT +M PE + + D F+
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 311 GVILLELLTGMKPI 324
GV L E++ P
Sbjct: 376 GVTLYEMIAARGPF 389
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
+ L +LH + II+RD+K NVLLD++ ++ D G+ + K T+ GT
Sbjct: 298 IVSGLEHLHQ--RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYAGT 352
Query: 524 RPYMPPEAM 532
+M PE +
Sbjct: 353 PGFMAPELL 361
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G G FG V+ K K G + AVK + L V+ L
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKK---------------------VRLEVFRVEELVA 119
Query: 175 CKHVNLLRLLGLCNNIMNC----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
C ++ R++ L + I E + GSL + ++ P R LG A
Sbjct: 120 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP----EDRALYYLGQA 175
Query: 231 -EALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNM-KTMYTEN-LT 286
E L YLH+ + I+H DVK+ NVLL + L DFG + + K++ T + +
Sbjct: 176 LEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 287 GTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKP 323
GT +M PE M K D++S ++L +L G P
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 462 LGVA-EALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNV-KTMYTE 518
LG A E L YLH+ + I+H DVK+ NVLL + L DFG + + K++ T
Sbjct: 172 LGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 519 N-LTGTRPYMPPE-AMHCQISTKTDVFS 544
+ + GT +M PE M K D++S
Sbjct: 230 DYIPGTETHMAPEVVMGKPCDAKVDIWS 257
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Query: 165 FENEVQTLSQCKHVNLLRLL-GLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
E E + KH N++RL + + ++++ + G L++ + D++
Sbjct: 57 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI 116
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIVKMSETSNMKTM 280
L EA+ + H + ++HR++K N+LL KL DFG+ E
Sbjct: 117 QQIL---EAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF 171
Query: 281 YTENLTGTRPYMPPEAMHCQISTK-TDVFSYGVILLELLTGMKPIDDNN 328
GT Y+ PE + K D+++ GVIL LL G P D +
Sbjct: 172 ---GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIVKMSETSNVKTMYTENL 520
+ EA+ + H + ++HR++K N+LL KL DFG+ E
Sbjct: 119 ILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF---GF 173
Query: 521 TGTRPYMPPEAM 532
GT Y+ PE +
Sbjct: 174 AGTPGYLSPEVL 185
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 116 KLGEGQFGTVYYGKLKN-GMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G G FG V+ K K G + AVK + L V+ L
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKK---------------------VRLEVFRVEELVA 103
Query: 175 CKHVNLLRLLGLCNNIMNC----IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVA 230
C ++ R++ L + I E + GSL + ++ P R LG A
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP----EDRALYYLGQA 159
Query: 231 -EALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNM-KTMYTEN-LT 286
E L YLH+ + I+H DVK+ NVLL + L DFG + + K++ T + +
Sbjct: 160 LEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 287 GTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKP 323
GT +M PE M K D++S ++L +L G P
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 462 LGVA-EALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGDFGIVKMSETSNV-KTMYTE 518
LG A E L YLH+ + I+H DVK+ NVLL + L DFG + + K++ T
Sbjct: 156 LGQALEGLEYLHT--RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 519 N-LTGTRPYMPPE-AMHCQISTKTDVFS 544
+ + GT +M PE M K D++S
Sbjct: 214 DYIPGTETHMAPEVVMGKPCDAKVDIWS 241
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG + K E +AVK +E + E+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN--------------VKREIINHRSL 72
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++R + + IV EY G L++R+ N ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS 129
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNMKTMYTENLTGTRPYM 292
Y H++ + HRD+K N LLD + P+L FG K S++ ++ GT Y+
Sbjct: 130 YCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKDTVGTPAYI 183
Query: 293 PPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 326
PE + + DV+S GV L +L G P +D
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNVKTMYTENLTGTR 524
+ Y H++ + HRD+K N LLD + P+L FG K S+V ++ GT
Sbjct: 127 GVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKDTVGTP 180
Query: 525 PYMPPEAM 532
Y+ PE +
Sbjct: 181 AYIAPEVL 188
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 166 ENEVQTLSQCK-HVNLLRLLGLCNNIMNC-IVYEYMCNGSLYDRLARVNNTPPLDSNKRY 223
+ E+ L C+ H N+++L + ++ ++ +V E + G L++R+ + + +++
Sbjct: 53 QKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS--- 109
Query: 224 SIALGVAEALHYLHSLSKPIIHRDVKSANVLL---DENFVPKLGDFGIVKMSETSNMKTM 280
I + A+ ++H + ++HRD+K N+L ++N K+ DFG ++ N
Sbjct: 110 YIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL- 166
Query: 281 YTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 338
+ T Y PE ++ D++S GVIL +L+G P ++ L VE
Sbjct: 167 --KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
IV EYM LA V PL + L Y+HS + ++HRD+K AN+
Sbjct: 99 IVQEYMETD-----LANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANL 151
Query: 254 LLD-ENFVPKLGDFGIVK-MSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFS 309
++ E+ V K+GDFG+ + M + K +E L T+ Y P + + D+++
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWA 210
Query: 310 YGVILLELLTG 320
G I E+LTG
Sbjct: 211 AGCIFAEMLTG 221
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 443 LARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDF 501
LA V PL + L Y+HS + ++HRD+K AN+ ++ E+ V K+GDF
Sbjct: 108 LANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDF 165
Query: 502 GIVKM 506
G+ ++
Sbjct: 166 GLARI 170
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G G +GTVY + +G +A+K++ + ++ L
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL--------LRRLEA 62
Query: 175 CKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPP--LDSNKRYSIA 226
+H N++RL+ +C I +V+E++ D ++ PP L + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETIKDLM 118
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
L +LH+ I+HRD+K N+L+ KL DFG+ ++ M +
Sbjct: 119 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALAPVV 172
Query: 287 GTRPYMPPEA-MHCQISTKTDVFSYGVILLELL 318
T Y PE + +T D++S G I E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
L +LH+ I+HRD+K N+L+ KL DFG+ ++ M + T Y
Sbjct: 124 GLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALAPVVVTLWY 177
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + +T D++S G
Sbjct: 178 RAPEVLLQSTYATPVDMWSVG 198
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V EY G L L++ P + + Y + A+ +H L +HRD+K N+
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE--IVMAIDSVHRLG--YVHRDIKPDNI 193
Query: 254 LLDENFVPKLGDFG-IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--------QISTK 304
LLD +L DFG +K+ ++++ GT Y+ PE + +
Sbjct: 194 LLDRCGHIRLADFGSCLKLRADGTVRSLVA---VGTPDYLSPEILQAVGGGPGTGSYGPE 250
Query: 305 TDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 337
D ++ GV E+ G P ++T Y +V
Sbjct: 251 CDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG-IVKMSETSNVKTMYTENLTG 522
+ A+ +H L +HRD+K N+LLD +L DFG +K+ V+++ G
Sbjct: 171 IVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA---VG 225
Query: 523 TRPYMPPEAMHC 534
T Y+ PE +
Sbjct: 226 TPDYLSPEILQA 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 117 LGEGQFGTVYYGKLKNGME-IAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQC 175
+G G FG + K E +AVK +E + E+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN--------------VKREIINHRSL 72
Query: 176 KHVNLLRLLGLCNNIMN-CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALH 234
+H N++R + + IV EY G L++R+ N ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVS 129
Query: 235 YLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNMKTMYTENLTGTRPYM 292
Y H++ + HRD+K N LLD + P+L FG K S++ ++ GT Y+
Sbjct: 130 YCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTPAYI 183
Query: 293 PPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 326
PE + + DV+S GV L +L G P +D
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG--DFGIVKMSETSNVKTMYTENLTGTR 524
+ Y H++ + HRD+K N LLD + P+L FG K S+V ++ GT
Sbjct: 127 GVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTP 180
Query: 525 PYMPPEAM 532
Y+ PE +
Sbjct: 181 AYIAPEVL 188
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G G +GTVY + +G +A+K++ LL + L
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL-----RRLEA 70
Query: 175 CKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPP--LDSNKRYSIA 226
+H N++RL+ +C I +V+E++ D ++ PP L + +
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETIKDLM 126
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNMKTMY 281
L +LH+ I+HRD+K N+L+ KL DFG+ + M+ T + T++
Sbjct: 127 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLW 184
Query: 282 TENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELL 318
Y PE + +T D++S G I E+
Sbjct: 185 ---------YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 466 EALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNVKTMYTENL 520
L +LH+ I+HRD+K N+L+ KL DFG+ + M+ T V T++
Sbjct: 131 RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLW---- 184
Query: 521 TGTRPYMPPEA-MHCQISTKTDVFSYG 546
Y PE + +T D++S G
Sbjct: 185 -----YRAPEVLLQSTYATPVDMWSVG 206
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 194 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 253
+V+E M GS+ + + + L+++ + VA AL +LH+ K I HRD+K N+
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEAS---VVVQDVASALDFLHN--KGIAHRDLKPENI 142
Query: 254 LLDE--NFVP-KLGDF----GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------Q 300
L + P K+ DF GI + S + T G+ YM PE +
Sbjct: 143 LCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 301 ISTKTDVFSYGVILLELLTGMKPI 324
+ D++S GVIL LL+G P
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPF 226
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDE--NFVP-KLGDF----GIVKMSETSNVKTMY 516
VA AL +LH+ K I HRD+K N+L + P K+ DF GI + S + T
Sbjct: 120 VASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 517 TENLTGTRPYMPPEAM 532
G+ YM PE +
Sbjct: 178 LLTPCGSAEYMAPEVV 193
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
LD + + + + +LHS IIHRD+K +N+++ + K+ DFG+ + + TS
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 173
Query: 277 MKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNT 329
M T Y TR Y PE + D++S G I+ E L G ID N
Sbjct: 174 MMTPY----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 330 IL 331
++
Sbjct: 230 VI 231
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD + + + + +LHS IIHRD+K +N+++ + K+ DFG+ + + TS
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 173
Query: 512 VKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ T Y TR Y PE + D++S G
Sbjct: 174 MMTPY----VVTRYYRAPEVILGMGYKENVDIWSVG 205
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 254
Query: 289 RP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 254
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFG 280
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 261
Query: 289 RP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 261
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFG 287
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 263
Query: 289 RP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 263
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFG 289
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
LD + + + + +LHS IIHRD+K +N+++ + K+ DFG+ + + TS
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 277 MKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNT 329
M T Y TR Y PE + D++S G I+ E L G ID N
Sbjct: 181 MMTPY----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 330 IL 331
++
Sbjct: 237 VI 238
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD + + + + +LHS IIHRD+K +N+++ + K+ DFG+ + + TS
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 512 VKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ T Y TR Y PE + D++S G
Sbjct: 181 MMTPY----VVTRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 229 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGT 288
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 256
Query: 289 RP--YMPPEAMHCQIST-KTDVFSYGVILLELLT-GMKP 323
P +M PE + ++ T ++DV+S+GV+L E+ + G P
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGT 523
VA+ + +L S+ IHRD+ + N+LL E V K+ DFG+ + Y
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 256
Query: 524 RP--YMPPEAMHCQIST-KTDVFSYG 546
P +M PE + ++ T ++DV+S+G
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFG 282
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 217 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 276
LD + + + + +LHS IIHRD+K +N+++ + K+ DFG+ + + TS
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 277 MKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNT 329
M T Y TR Y PE + D++S G I+ E L G ID N
Sbjct: 181 MMTPY----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 330 IL 331
++
Sbjct: 237 VI 238
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 452 LDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 511
LD + + + + +LHS IIHRD+K +N+++ + K+ DFG+ + + TS
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 512 VKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+ T Y TR Y PE + D++S G
Sbjct: 181 MMTPY----VVTRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 116 KLGEGQFGTVYYGK-LKNGMEIAVKTLEXXXXXXXXXXXXTEAAMIPILLFENEVQTLSQ 174
++G G +GTVY + +G +A+K++ + ++ L
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL--------LRRLEA 62
Query: 175 CKHVNLLRLLGLC------NNIMNCIVYEYMCNGSLYDRLARVNNTPP--LDSNKRYSIA 226
+H N++RL+ +C I +V+E++ D ++ PP L + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ----DLRTYLDKAPPPGLPAETIKDLM 118
Query: 227 LGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLT 286
L +LH+ I+HRD+K N+L+ KL DFG+ ++ M +
Sbjct: 119 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALFPVV 172
Query: 287 GTRPYMPPEA-MHCQISTKTDVFSYGVILLELL 318
T Y PE + +T D++S G I E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK-----MSETSNVKTMYTENLT 521
L +LH+ I+HRD+K N+L+ KL DFG+ + M+ V T++
Sbjct: 124 GLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLW----- 176
Query: 522 GTRPYMPPEA-MHCQISTKTDVFSYG 546
Y PE + +T D++S G
Sbjct: 177 ----YRAPEVLLQSTYATPVDMWSVG 198
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 193 CIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 251
C+++E + SLY+ + R N N ++ K Y I + +AL+YL +S + H D+K
Sbjct: 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIE--ILKALNYLRKMS--LTHTDLKPE 166
Query: 252 NVLLDENF-------VPKLGDFGIVKMSET------------SNMKTMYTENLTGTRPYM 292
N+LLD+ + V ++ D +++ T + K+ Y ++ TR Y
Sbjct: 167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYR 226
Query: 293 PPEA-MHCQISTKTDVFSYGVILLELLTG 320
PE ++ +D++S+G +L EL TG
Sbjct: 227 APEVILNLGWDVSSDMWSFGCVLAELYTG 255
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 464 VAEALHYLHSLSKPIIHRDVKSANVLLDENF-------VPKLGDFGIVKMSET------- 509
+ +AL+YL +S + H D+K N+LLD+ + V ++ D +++ T
Sbjct: 146 ILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203
Query: 510 -----SNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGA 547
+ K+ Y ++ TR Y PE ++ +D++S+G
Sbjct: 204 IDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGC 247
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL 331
PE + D++S G I+ E L G ID N ++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 106 LVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 156
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL 331
PE + D++S G I+ E L G ID N ++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 467 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPY 526
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS + T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV----TRYY 191
Query: 527 MPPEA-MHCQISTKTDVFSYG 546
PE + D++S G
Sbjct: 192 RAPEVILGMGYKENVDIWSVG 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 229
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL 331
PE + D++S G I+ E L G ID N ++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 144 LVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 194
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 195 IVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVG 250
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M + TR Y
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV----TRYY 193
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 339
PE + D++S G I+ E++ G + I + V+EQ
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
I+++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 108 IVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 158
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + + TR Y PE + D++S G
Sbjct: 159 IVVKSDCTLKILDFGLARTAGTSFMMVPFVV----TRYYRAPEVILGMGYKENVDIWSVG 214
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYY 229
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL 331
PE + D++S G I+ E L G ID N ++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 144 LVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 194
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 195 IVVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVG 250
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY----VVTRYY 190
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL 331
PE + D++S G I+ E L G ID N ++
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 237
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 105 LVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 155
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 156 IVVKSDCTLKILDFGLARTAGTSFMMTPY----VVTRYYRAPEVILGMGYKENVDIWSVG 211
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 232 ALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPY 291
+ +LHS IIHRD+K +N+++ + K+ DFG+ + + TS M T Y TR Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY----VVTRYY 191
Query: 292 MPPEA-MHCQISTKTDVFSYGVILLE------LLTGMKPIDDNNTIL 331
PE + D++S G I+ E L G ID N ++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 428 IILDTGETKQCQLFKLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 487
++++ + CQ+ ++ LD + + + + +LHS IIHRD+K +N
Sbjct: 106 LVMELMDANLCQVIQME-------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSN 156
Query: 488 VLLDENFVPKLGDFGIVKMSETSNVKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYG 546
+++ + K+ DFG+ + + TS + T Y TR Y PE + D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPY----VVTRYYRAPEVILGMGYKENVDIWSVG 212
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 166 ENEVQTLSQCKHVNLLRLLGLCNNIMNCI-VYEYMCNGSLYDRLARVNNTPPLDSNKRYS 224
+NE+ ++Q H L+ L + + + E++ G L+DR+A + + + +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK--MSEAEVIN 153
Query: 225 IALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP--KLGDFGIV-KMSETSNMKTMY 281
E L ++H S I+H D+K N++ + K+ DFG+ K++ +K
Sbjct: 154 YMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT- 210
Query: 282 TENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMKPI---DDNNTI 330
T T + PE + + + TD+++ GV+ LL+G+ P DD T+
Sbjct: 211 ----TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,226,909
Number of Sequences: 62578
Number of extensions: 706747
Number of successful extensions: 5126
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 1775
Number of HSP's gapped (non-prelim): 2216
length of query: 593
length of database: 14,973,337
effective HSP length: 104
effective length of query: 489
effective length of database: 8,465,225
effective search space: 4139495025
effective search space used: 4139495025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)