Query psy9536
Match_columns 287
No_of_seqs 115 out of 125
Neff 3.3
Searched_HMMs 13730
Date Fri Aug 16 22:07:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9536.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9536hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zaka2 g.41.2.1 (A:128-158) M 77.0 0.43 3.1E-05 29.9 1.3 12 185-196 3-14 (31)
2 d1g47a1 g.39.1.3 (A:1-35) Pinc 45.0 2.9 0.00021 26.6 0.6 19 178-197 16-34 (35)
3 d1ak2a2 g.41.2.1 (A:147-176) M 38.5 6.8 0.00049 23.8 1.6 16 188-203 1-18 (30)
4 d1r5ta_ c.97.1.1 (A:) mono-dom 20.0 5.2 0.00038 31.1 -1.8 47 134-184 91-140 (141)
5 d2dloa1 g.39.1.3 (A:8-42) Thyr 18.3 13 0.00093 23.4 0.1 12 186-197 22-33 (35)
6 d1e4va2 g.41.2.1 (A:122-156) M 17.0 25 0.0018 21.5 1.3 12 186-197 4-15 (35)
7 d1uwza_ c.97.1.1 (A:) mono-dom 15.5 8.7 0.00063 29.2 -1.5 46 134-184 82-130 (130)
8 d2ak3a2 g.41.2.1 (A:125-161) M 14.5 43 0.0031 20.7 2.0 13 185-197 3-15 (37)
9 d1akya2 g.41.2.1 (A:131-168) M 14.3 31 0.0023 21.5 1.3 11 186-196 4-14 (38)
10 d1eg3a3 b.72.1.1 (A:47-84) Dys 12.2 36 0.0026 21.6 1.1 8 35-42 26-33 (38)
No 1
>d1zaka2 g.41.2.1 (A:128-158) Microbial and mitochondrial ADK, insert "zinc finger" domain {Maize (Zea mays) [TaxId: 4577]}
Probab=76.97 E-value=0.43 Score=29.86 Aligned_cols=12 Identities=42% Similarity=0.656 Sum_probs=10.8
Q ss_pred eecCCCCeeecc
Q psy9536 185 YMSLDTGRIYHP 196 (287)
Q Consensus 185 ~m~p~tGRlYHP 196 (287)
.|+|.||.+||=
T Consensus 3 R~DP~TG~iYH~ 14 (31)
T d1zaka2 3 RLDPVTGKIYHL 14 (31)
T ss_dssp EECTTTCCEEES
T ss_pred cCCCCCCcEeEE
Confidence 589999999994
No 2
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.01 E-value=2.9 Score=26.56 Aligned_cols=19 Identities=26% Similarity=0.681 Sum_probs=15.5
Q ss_pred cccCCeeeecCCCCeeeccC
Q psy9536 178 PFDPSKIYMSLDTGRIYHPT 197 (287)
Q Consensus 178 pFqPe~L~m~p~tGRlYHPa 197 (287)
-|+|..=.+. ++|.|||+.
T Consensus 16 gF~p~EkiVN-SnGEl~H~q 34 (35)
T d1g47a1 16 GFAPAEKIVN-SNGELYHEQ 34 (35)
T ss_dssp BCCSTTTCEE-ETTEEECTT
T ss_pred CCCchHHhhc-CCCcccccc
Confidence 4888877777 899999983
No 3
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=38.46 E-value=6.8 Score=23.77 Aligned_cols=16 Identities=25% Similarity=0.399 Sum_probs=11.0
Q ss_pred CCCCeeeccC--CCCCCc
Q psy9536 188 LDTGRIYHPT--TSQYGS 203 (287)
Q Consensus 188 p~tGRlYHPa--p~~~Gg 203 (287)
|.+||+||=. |.+..|
T Consensus 1 P~sG~~Yhv~f~PPk~~g 18 (30)
T d1ak2a2 1 PQSGRSYHEEFNPPKEPM 18 (30)
T ss_dssp TTTCCEEBTTTBCCSSTT
T ss_pred CCCCCCccccccCCCCCC
Confidence 6899999973 444433
No 4
>d1r5ta_ c.97.1.1 (A:) mono-domain cytidine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.01 E-value=5.2 Score=31.06 Aligned_cols=47 Identities=32% Similarity=0.557 Sum_probs=30.1
Q ss_pred eeccCCCccceee---cCCcceEEEeeecCCCCceeEeecCCCcccccccCCee
Q psy9536 134 FISPCGRERNFIR---CDDTPVVYTHVITTPEGEFFCHNHAGDELRHPFDPSKI 184 (287)
Q Consensus 134 ~lS~CG~ErNFIR---CdD~PiVFt~L~~~~~~~~Lsy~~~g~~L~vpFqPe~L 184 (287)
.+||||.=|-+|+ .+|+||+..... ...+-.+. -++.|-.+|-|+.|
T Consensus 91 ~~sPCG~CRQ~l~E~~~~~~~ii~~~~~---g~~~~~~~-l~eLLP~~F~p~~L 140 (141)
T d1r5ta_ 91 CVSPCGVCRQFINEFVVKDFPIVMLNST---GSRSKVMT-MGELLPMAFGPSHL 140 (141)
T ss_dssp CCCCCHHHHHHHHTTSCTTCEEEEECSS---SSSEEEEE-HHHHSTTCCCGGGC
T ss_pred CCCchHHHHHHHHHhcCCCcEEEEEcCC---CCEEEEEE-HHHhCCCCCChhhC
Confidence 5899999888876 467888764332 11121121 12678888888876
No 5
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.26 E-value=13 Score=23.42 Aligned_cols=12 Identities=33% Similarity=0.725 Sum_probs=9.2
Q ss_pred ecCCCCeeeccC
Q psy9536 186 MSLDTGRIYHPT 197 (287)
Q Consensus 186 m~p~tGRlYHPa 197 (287)
|.-.+|+.|||.
T Consensus 22 iLrA~Gk~yHP~ 33 (35)
T d2dloa1 22 ILRAMGKAYHPG 33 (35)
T ss_dssp CEEETTEEECTT
T ss_pred HHHHhCCCCCCC
Confidence 444789999994
No 6
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=17.02 E-value=25 Score=21.53 Aligned_cols=12 Identities=33% Similarity=0.764 Sum_probs=9.7
Q ss_pred ecCCCCeeeccC
Q psy9536 186 MSLDTGRIYHPT 197 (287)
Q Consensus 186 m~p~tGRlYHPa 197 (287)
+-|..|++||=.
T Consensus 4 ~c~~cG~~Yh~~ 15 (35)
T d1e4va2 4 VHAPSGRVYHVK 15 (35)
T ss_dssp EETTTTEEEETT
T ss_pred CCcCcCChhhhc
Confidence 457899999974
No 7
>d1uwza_ c.97.1.1 (A:) mono-domain cytidine deaminase {Bacillus subtilis [TaxId: 1423]}
Probab=15.52 E-value=8.7 Score=29.18 Aligned_cols=46 Identities=30% Similarity=0.524 Sum_probs=30.2
Q ss_pred eeccCCCccceee--c-CCcceEEEeeecCCCCceeEeecCCCcccccccCCee
Q psy9536 134 FISPCGRERNFIR--C-DDTPVVYTHVITTPEGEFFCHNHAGDELRHPFDPSKI 184 (287)
Q Consensus 134 ~lS~CG~ErNFIR--C-dD~PiVFt~L~~~~~~~~Lsy~~~g~~L~vpFqPe~L 184 (287)
.+||||.=|-+|+ + .|.||+..... +..-.+. -.+.|-.+|-|+.|
T Consensus 82 ~~sPCG~CRQ~l~E~~~~~~~i~l~~~~----g~~~~~~-l~eLLP~~F~~~dL 130 (130)
T d1uwza_ 82 PVSPCGACRQVISELCTKDVIVVLTNLQ----GQIKEMT-VEELLPGAFSSEDL 130 (130)
T ss_dssp SCCCCHHHHHHHHHHSCTTCEEEEECSS----SCEEEEE-HHHHSTTCCCGGGC
T ss_pred ccCcCHHHHHHHHHhCCCCcEEEEECCC----CCEEEEE-HHHhCcCCCCcccC
Confidence 4799999999887 4 57888765432 1222221 13678888888875
No 8
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=14.53 E-value=43 Score=20.68 Aligned_cols=13 Identities=23% Similarity=0.677 Sum_probs=10.4
Q ss_pred eecCCCCeeeccC
Q psy9536 185 YMSLDTGRIYHPT 197 (287)
Q Consensus 185 ~m~p~tGRlYHPa 197 (287)
.+-|..|++||=.
T Consensus 3 ~vc~~cG~~Yh~~ 15 (37)
T d2ak3a2 3 WIHPGSGRVYNIE 15 (37)
T ss_dssp EEETTTTEEEETT
T ss_pred eeeCCcCChhhhc
Confidence 3567999999974
No 9
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.26 E-value=31 Score=21.45 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=9.2
Q ss_pred ecCCCCeeecc
Q psy9536 186 MSLDTGRIYHP 196 (287)
Q Consensus 186 m~p~tGRlYHP 196 (287)
|-|..|++||-
T Consensus 4 ~C~~cG~~Yh~ 14 (38)
T d1akya2 4 IHPASGRSYHK 14 (38)
T ss_dssp ECTTTCCEEET
T ss_pred CCcCccchhhh
Confidence 55789999996
No 10
>d1eg3a3 b.72.1.1 (A:47-84) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.16 E-value=36 Score=21.59 Aligned_cols=8 Identities=50% Similarity=1.107 Sum_probs=6.8
Q ss_pred EEEccCCc
Q psy9536 35 YYIDHNGM 42 (287)
Q Consensus 35 yyid~~G~ 42 (287)
|||+|+.+
T Consensus 26 YYINH~~e 33 (38)
T d1eg3a3 26 YYINHETQ 33 (38)
T ss_dssp EEEETTTT
T ss_pred eEeecccc
Confidence 99999865
Done!