BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9538
(117 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
A I+ YA+ RDP Y++ +F+PDR+LPE+ PKY +PF+AG RKC + ++M Q
Sbjct: 360 ADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQ 419
Query: 70 MKIVISTVLRHFK 82
+ ++ + + ++
Sbjct: 420 LTLITAALATKYR 432
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
+M YA+HRDP + P++F P+RF + Y Y PF +G R CI ++A++
Sbjct: 370 VVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMN 429
Query: 70 MKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVNLESR 116
MK+ + VL++F P +T LK + L + + +ESR
Sbjct: 430 MKLALIRVLQNFSF--KPCKETQIPLKLSLGGLLQPEKPVVLKVESR 474
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
+M YA+HRDP + P++F P+RF + Y Y PF +G R CI ++A++
Sbjct: 371 VVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMN 430
Query: 70 MKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVNLESR 116
MK+ + VL++F P +T LK + L + + +ESR
Sbjct: 431 MKLALIRVLQNFSF--KPCKETQIPLKLSLGGLLQPEKPVVLKVESR 475
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
+M YA+HRDP + P++F P+RF + Y Y PF +G R CI ++A++
Sbjct: 372 VVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMN 431
Query: 70 MKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVNLESR 116
MK+ + VL++F P +T LK + L + + +ESR
Sbjct: 432 MKLALIRVLQNFSF--KPCKETQIPLKLSLGGLLQPEKPVVLKVESR 476
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 17 YAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVIST 76
Y M R +E+P FNPDRF P P++ Y PF+ G+R CI ++A +++K+V++
Sbjct: 348 YVMGRMDTYFEDPLTFNPDRFGPG--APKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAK 405
Query: 77 VLR--HFKILPSPRY 89
+L+ F+++P R+
Sbjct: 406 LLQRLEFRLVPGQRF 420
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 15/97 (15%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFLPEKFGKY-PKYNYQPFAAGNRKCIAYKYAMLQMKIVI 74
I H DP++Y +P++F+P+RF P+ + P + + PF G R+C+ ++A L+MK+
Sbjct: 346 ISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFA 405
Query: 75 STVLRHFK------------ILPSPRYKTIDDLKYEM 99
+ +++ F + PSPR K D+L+ ++
Sbjct: 406 TRLIQQFDWTLLPGQNLELVVTPSPRPK--DNLRVKL 440
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
RDP+ + NP FNP FL EK G++ K + + PF+ G R C A +++ + +TV++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEK-GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 80 HFKILPSPRYKTID 93
+F++ S K ID
Sbjct: 437 NFRLKSSQSPKDID 450
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
RDP+ + NP FNP FL EK G++ K + + PF+ G R C A +++ + +TV++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEK-GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 80 HFKILPSPRYKTID 93
+F++ S K ID
Sbjct: 437 NFRLKSSQSPKDID 450
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
RDP+ + NP FNP FL EK G++ K + + PF+ G R C A +++ + +TV++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEK-GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 80 HFKILPSPRYKTID 93
+F++ S K ID
Sbjct: 437 NFRLKSSQSPKDID 450
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
RDP+ + NP FNP FL EK G++ K + + PF+ G R C A +++ + +TV++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEK-GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 80 HFKILPSPRYKTID 93
+F++ S K ID
Sbjct: 437 NFRLKSSQSPKDID 450
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
RDP+ + NP FNP FL EK G++ K + + PF+ G R C A +++ + +TV++
Sbjct: 378 RDPSFFSNPQDFNPQHFLNEK-GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQ 436
Query: 80 HFKILPSPRYKTID 93
+F++ S K ID
Sbjct: 437 NFRLKSSQSPKDID 450
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
IM I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 359 IMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 416
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 417 TLVLGMMLKHF 427
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD V+ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD V+ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 VMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 413
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 414 TLVLGMMLKHF 424
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 413
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 414 TLVLGMMLKHF 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 413
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 414 TLVLGMMLKHF 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAYKYAML 68
TIM + ++ D + NP+ F+P FL +K G + K +Y PF+AG R C A +
Sbjct: 367 TTIMALLTSVLHDDKEFPNPNIFDPGHFL-DKNGNFKKSDYFMPFSAGKRICAGEGLARM 425
Query: 69 QMKIVISTVLRHFKILPSPRYKTIDDLK 96
++ + ++T+L++F + K++DDLK
Sbjct: 426 ELFLFLTTILQNFNL------KSVDDLK 447
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFY-NGIYVNLESR 116
+V+ +L+HF Y + +++ TLT G V +S+
Sbjct: 411 TLVLGMMLKHFDFEDHTNY------ELDIKETLTLKPEGFVVKAKSK 451
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFY-NGIYVNLESR 116
+V+ +L+HF Y + +++ TLT G V +S+
Sbjct: 411 TLVLGMMLKHFDFEDHTNY------ELDIKETLTLKPEGFVVKAKSK 451
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFY-NGIYVNLESR 116
+V+ +L+HF Y + +++ TLT G V +S+
Sbjct: 411 TLVLGMMLKHFDFEDHTNY------ELDIKETLTLKPEGFVVKAKSK 451
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFY-NGIYVNLESR 116
+V+ +L+HF Y + +++ TLT G V +S+
Sbjct: 411 TLVLGMMLKHFDFEDHTNY------ELDIKETLTLKPEGFVVKAKSK 451
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFY-NGIYVNLESR 116
+V+ +L+HF Y + +++ TLT G V +S+
Sbjct: 411 TLVLGMMLKHFDFEDHTNY------ELDIKETLTLKPEGFVVKAKSK 451
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGKQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H+D + NP ++NP+R + G + F AG KCI K+ +LQ+K V++TVLR
Sbjct: 360 HQDEEAFPNPREWNPERNMKLVDGAFCG-----FGAGVHKCIGEKFGLLQVKTVLATVLR 414
Query: 80 HFKI-----LPSPRYKTI 92
+ LP P Y T+
Sbjct: 415 DYDFELLGPLPEPNYHTM 432
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++P+ G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPWGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++P+ G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPYGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVIS 75
IYAM RDP + +PD+F+P R+L K + F G R+C+ + A L+M + +
Sbjct: 380 IYAMGRDPAFFSSPDKFDPTRWL-SKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLI 438
Query: 76 TVLRHFKI 83
+L +FK+
Sbjct: 439 HILENFKV 446
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R C ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACEGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++P G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPHGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++P G R CI ++A+ +
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPAGNGQRACIGQQFALHEA 410
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 411 TLVLGMMLKHF 421
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 12 IMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
+M I +HRD ++ ++ ++F P+RF E P++ ++PF G R C ++A+ +
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACPGQQFALHEA 411
Query: 71 KIVISTVLRHF 81
+V+ +L+HF
Sbjct: 412 TLVLGMMLKHF 422
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 32 FNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
FNPDR+L + K+ Y PF AG +CI +A +Q+K + ST+LR
Sbjct: 373 FNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLR 420
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D V+E P +F PDRFL G P + F G R C+ A L++ +V++ +L+
Sbjct: 391 HLDETVWEQPHEFRPDRFLEP--GANP--SALAFGCGARVCLGESLARLELFVVLARLLQ 446
Query: 80 HFKILPSP 87
F +LP P
Sbjct: 447 AFTLLPPP 454
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 12 IMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAYKYAMLQM 70
I+ + ++ D + NP F+P FL E G + K +Y PF+AG R C+ A +++
Sbjct: 366 IITSLTSVLHDEKAFPNPKVFDPGHFLDES-GNFKKSDYFMPFSAGKRMCVGEGLARMEL 424
Query: 71 KIVISTVLRHFKI 83
+ ++++L++FK+
Sbjct: 425 FLFLTSILQNFKL 437
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
T++ +Y++H D + +P+ F+P+RFL K PF+ G R C+ A ++
Sbjct: 372 TTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARME 431
Query: 70 MKIVISTVLRHFKI-LPSPRYKTIDDLKYEMRVTL 103
M + + +L+ F + P ++ + DLK + +TL
Sbjct: 432 MFLFFTALLQRFHLHFP---HELVPDLKPRLGMTL 463
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
T++ +Y++H D + +P+ F+P+RFL K PF+ G R C+ A ++
Sbjct: 372 TTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARME 431
Query: 70 MKIVISTVLRHFKI-LPSPRYKTIDDLKYEMRVTL 103
M + + +L+ F + P ++ + DLK + +TL
Sbjct: 432 MFLFFTALLQRFHLHFP---HELVPDLKPRLGMTL 463
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFLPEKFGKY--PKYNYQPFAAGNRKCIAYKYAMLQMKIV 73
++A+H + + PDQF P+RFL + P +Y PF AG R CI A ++ ++
Sbjct: 378 LWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLI 437
Query: 74 ISTVLRHFKI 83
++ +L+ F +
Sbjct: 438 MAWLLQRFDL 447
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
RDP + NP FNP FL +K G++ K + + PF+ G R C A +++ + +T+++
Sbjct: 378 RDPRFFSNPRDFNPQHFLDKK-GQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQ 436
Query: 80 HFKILPSPRYKTID 93
+F+ K ID
Sbjct: 437 NFRFKSPQSPKDID 450
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAYKYAML 68
TI+ + ++ D + NP+ F+P FL E G + K NY PF+AG R C+ A +
Sbjct: 368 TTILTSLTSVLHDNKEFPNPEMFDPRHFLDEG-GNFKKSNYFMPFSAGKRICVGEGLARM 426
Query: 69 QMKIVISTVLRHFKI 83
++ + ++ +L++F +
Sbjct: 427 ELFLFLTFILQNFNL 441
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A+H DP+ +E PD FNPD FL + PF+ G R C+ A ++ + +T+
Sbjct: 376 ALH-DPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTI 434
Query: 78 LRHFKI 83
L++F +
Sbjct: 435 LQNFSM 440
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 3 PKEKILDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYN--YQPFAAGNRKC 60
PK ++ T+ + +Y D + +P++F P+ FL E GK+ KY+ ++PF+ G R C
Sbjct: 363 PKGTVVVPTLDSVLY----DNQEFPDPEKFKPEHFLNEN-GKF-KYSDYFKPFSTGKRVC 416
Query: 61 IAYKYAMLQMKIVISTVLRHFKILPSPRYKTID 93
A +++ +++ +L+HF + P K ID
Sbjct: 417 AGEGLARMELFLLLCAILQHFNLKPLVDPKDID 449
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAYKYAML 68
TI+ + ++ D + NP+ F+P FL E G + K Y PF+AG R C+ A +
Sbjct: 366 TTILISLTSVLHDNKEFPNPEMFDPHHFLDEG-GNFKKSKYFMPFSAGKRICVGEALAGM 424
Query: 69 QMKIVISTVLRHFKI 83
++ + ++++L++F +
Sbjct: 425 ELFLFLTSILQNFNL 439
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 10 ATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAYKYAML 68
TI+ + ++ D + NP+ F+P FL E G + K Y PF+AG R C+ A +
Sbjct: 368 TTILISLTSVLHDNKEFPNPEMFDPHHFLDEG-GNFKKSKYFMPFSAGKRICVGEALAGM 426
Query: 69 QMKIVISTVLRHFKI 83
++ + ++++L++F +
Sbjct: 427 ELFLFLTSILQNFNL 441
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 30 DQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKI--LPSP 87
+ F P+RFL E+ P Y PF G R C+ +A+L+ IV+ R F++ LP P
Sbjct: 308 EAFQPERFLAER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFP 365
Query: 88 R 88
R
Sbjct: 366 R 366
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 26 YENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKI-- 83
+ + + F P+RFL E+ P Y PF G R C+ +A+L+ IV+ R F++
Sbjct: 304 FPDGEAFRPERFLEER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDP 361
Query: 84 LPSPR 88
LP PR
Sbjct: 362 LPFPR 366
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 41/71 (57%)
Query: 11 TIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
T++ + ++ +D V+E P +F+P+ FL + + PF+AG R C+ A +++
Sbjct: 372 TLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMEL 431
Query: 71 KIVISTVLRHF 81
+ +++L+HF
Sbjct: 432 FLFFTSLLQHF 442
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 41/71 (57%)
Query: 11 TIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
T++ + ++ +D V+E P +F+P+ FL + + PF+AG R C+ A +++
Sbjct: 372 TLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMEL 431
Query: 71 KIVISTVLRHF 81
+ +++L+HF
Sbjct: 432 FLFFTSLLQHF 442
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVIS 75
IYA+ R+P + +P+ F+P R+L K + F G R+C+ + A L+M I +
Sbjct: 379 IYALGREPTFFFDPENFDPTRWL-SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLI 437
Query: 76 TVLRHFKI 83
+L +F++
Sbjct: 438 NMLENFRV 445
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVIS 75
IYA+ R+P + +P+ F+P R+L K + F G R+C+ + A L+M I +
Sbjct: 376 IYALGREPTFFFDPENFDPTRWL-SKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLI 434
Query: 76 TVLRHFKI 83
+L +F++
Sbjct: 435 NMLENFRV 442
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 20 HRDPNVYENPDQFNPDRF-LPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+R P + +P F P R+ P + ++ + PF AG +C+ +A++Q+K + S +L
Sbjct: 353 NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLL 412
Query: 79 RHFK 82
R ++
Sbjct: 413 REYE 416
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A+H DP +E P+ FNP FL + PF+ G R C+ A ++ + +T+
Sbjct: 376 ALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 78 LRHFKIL-PSP 87
L++F I P P
Sbjct: 435 LQNFSIASPVP 445
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 20 HRDPNVYENPDQFNPDRF-LPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+R P + +P F P R+ P + ++ + PF AG +C+ +A++Q+K + S +L
Sbjct: 353 NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLL 412
Query: 79 RHFK 82
R ++
Sbjct: 413 REYE 416
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A+H DP +E P+ FNP FL + PF+ G R C+ A ++ + +T+
Sbjct: 376 ALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 78 LRHFKIL-PSP 87
L++F I P P
Sbjct: 435 LQNFSIASPVP 445
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 20 HRDPNVYENPDQFNPDRF-LPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+R P + +P F P R+ P + ++ + PF AG +C+ +A++Q+K + S +L
Sbjct: 353 NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLL 412
Query: 79 RHFK 82
R ++
Sbjct: 413 REYE 416
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 20 HRDPNVYENPDQFNPDRF-LPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+R P + +P F P R+ P + ++ + PF AG +C+ +A++Q+K + S +L
Sbjct: 353 NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLL 412
Query: 79 RHFK 82
R ++
Sbjct: 413 REYE 416
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A+H DP +E P+ FNP FL + PF+ G R C+ A ++ + +T+
Sbjct: 376 ALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 78 LRHFKI 83
L++F I
Sbjct: 435 LQNFSI 440
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A+H DP +E P+ FNP FL + PF+ G R C+ A ++ + +T+
Sbjct: 376 ALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 78 LRHFKI 83
L++F I
Sbjct: 435 LQNFSI 440
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + NP ++P+R EK + F AG KCI K+A+LQ+K +++T R
Sbjct: 365 HHDEEAFPNPRLWDPER--DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFR 418
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 419 EYDFQLLRDEVPDPDYHTM 437
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + NP ++P+R EK + F AG KCI K+A+LQ+K +++T R
Sbjct: 359 HHDEEAFPNPRLWDPER--DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFR 412
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 413 EYDFQLLRDEVPDPDYHTM 431
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + NP ++P+R EK + F AG KCI K+A+LQ+K +++T R
Sbjct: 374 HHDEEAFPNPRLWDPER--DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILATAFR 427
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 428 EYDFQLLRDEVPDPDYHTM 446
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 317 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 369
Query: 78 LRHF 81
+ F
Sbjct: 370 YQKF 373
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 318 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 370
Query: 78 LRHF 81
+ F
Sbjct: 371 YQKF 374
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 317 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 369
Query: 78 LRHF 81
+ F
Sbjct: 370 YQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 317 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 369
Query: 78 LRHF 81
+ F
Sbjct: 370 YQKF 373
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 316 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 368
Query: 78 LRHF 81
+ F
Sbjct: 369 YQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
+ +RD V+ENPD+FN +R K+P + F G+ +CIA A ++ V ST+
Sbjct: 317 SANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTL 369
Query: 78 LRHF 81
+ F
Sbjct: 370 YQKF 373
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A+H DP +E P+ FNP FL + PF+ G R C A ++ + +T+
Sbjct: 376 ALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTI 434
Query: 78 LRHFKI 83
L++F I
Sbjct: 435 LQNFSI 440
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 34 PDRFLPEKFGKYPKYNY-QPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKI 83
P+ F E F K Y Y QPF G R C AM+ MK ++ T+LR F +
Sbjct: 410 PNEFTLENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + P +++P+R EK + + F AG KCI K+ +LQ+K +++T R
Sbjct: 360 HHDEEAFPEPRRWDPER--DEKV----EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFR 413
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 414 SYDFQLLRDEVPDPDYHTM 432
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + P +++P+R EK + + F AG KCI K+ +LQ+K +++T R
Sbjct: 361 HHDEEAFPEPRRWDPER--DEKV----EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFR 414
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 415 SYDFQLLRDEVPDPDYHTM 433
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
D ++NY+ A H DP + P +F+P R P + F AG+ +C+ A L
Sbjct: 358 DWLMLNYVAANH-DPAQFPEPRKFDPTR---------PANRHLAFGAGSHQCLGLHLARL 407
Query: 69 QMKIVISTVL 78
+M++++ +L
Sbjct: 408 EMRVLLDVLL 417
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + P +++P+R EK + + F AG KCI K+ +LQ+K +++T R
Sbjct: 362 HHDEEAFPEPRRWDPER--DEKV----EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFR 415
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 416 SYDFQLLRDEVPDPDYHTM 434
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + P +++P+R EK + + F AG KCI K+ +LQ+K +++T R
Sbjct: 374 HHDEEAFPEPRRWDPER--DEKV----EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFR 427
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 428 SYDFQLLRDEVPDPDYHTM 446
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + P +++P+R EK + + F AG KCI K+ +LQ+K +++T R
Sbjct: 361 HHDEEAFPEPRRWDPER--DEKV----EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFR 414
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 415 SYDFQLLRDEVPDPDYHTM 433
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 79
H D + P +++P+R EK + + F AG KCI K+ +LQ+K +++T R
Sbjct: 374 HHDEEAFPEPRRWDPER--DEKV----EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFR 427
Query: 80 HFKI------LPSPRYKTI 92
+ +P P Y T+
Sbjct: 428 SYDFQLLRDEVPDPDYHTM 446
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 20 HRDPNVYENPDQFNPDRFL-PE--------KFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
RDP +Y +P+ F +RFL P+ K GK K P+ AG+ C+ YA+ +
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 441
Query: 71 KIVISTVLRHFKI 83
K + VL H +
Sbjct: 442 KQFVFLVLVHLDL 454
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 20 HRDPNVYENPDQFNPDRFL-PE--------KFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
RDP +Y +P+ F +RFL P+ K GK K P+ AG+ C+ YA+ +
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 429
Query: 71 KIVISTVLRHFKI 83
K + VL H +
Sbjct: 430 KQFVFLVLVHLDL 442
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF---------GKYPKYNYQPFAAGNRK 59
D I Y MH DP +Y +P F DR+L E G KY Y PF +G
Sbjct: 367 DDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATI 426
Query: 60 CIAYKYAMLQMKIVISTVLRHFKI 83
C +A+ ++K + +L +F++
Sbjct: 427 CPGRLFAIHEIKQFLILMLSYFEL 450
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF---------GKYPKYNYQPFAAGNRK 59
D I Y MH DP +Y +P F DR+L E G KY Y PF +G
Sbjct: 367 DDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATI 426
Query: 60 CIAYKYAMLQMKIVISTVLRHFKI 83
C +A+ ++K + +L +F++
Sbjct: 427 CPGRLFAIHEIKQFLILMLSYFEL 450
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 11 TIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 70
T++ + A HRDP + PD+F+PDR G F G C+ A L+
Sbjct: 326 TMLLLLAAAHRDPTIVGAPDRFDPDRAQIRHLG---------FGKGAHFCLGAPLARLEA 376
Query: 71 KIVISTVLRHF---KILPSPRYK 90
+ + + F ++ P YK
Sbjct: 377 TVALPALAARFPEARLSGEPEYK 399
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEK--FGKYPKYNYQPFAAGNRKCIAYKYA 66
D + ++++ DP + NP+ F+P RFL + K F+ G R+CI + +
Sbjct: 377 DTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELS 436
Query: 67 MLQMKIVISTVLRH---FKILPSPRYK-------TIDDLKYEMRVTL 103
+Q+ + IS +L H F+ P+ K TI +++ VTL
Sbjct: 437 KMQLFLFIS-ILAHQCDFRANPNEPAKMNFSYGLTIKPKSFKVNVTL 482
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 26 YENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILP 85
+E+ +F P+R+L +K K + + PF G R CI + A LQ+ + + +++ + I+
Sbjct: 397 FEDSHKFRPERWL-QKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVA 455
Query: 86 S 86
+
Sbjct: 456 T 456
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 15 YIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVI 74
+I + +RD V+++PD F PDR + F +G C+ A L+ +I +
Sbjct: 281 WIASANRDEEVFKDPDSFIPDR---------TPNPHLSFGSGIHLCLGAPLARLEARIAL 331
Query: 75 STVLRHFKILPSPRYKTIDD 94
+ F++ + + ID+
Sbjct: 332 EEFAKKFRVKEIVKKEKIDN 351
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 17 YAMHRDPNVYENPDQFNPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIV 73
+ ++ DP ++E+P +F P+RFL K F G R+CI A ++ +
Sbjct: 388 WQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLF 447
Query: 74 ISTVLRHFKILPSPRYK 90
++ +L+ + P K
Sbjct: 448 LAILLQQLEFSVPPGVK 464
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYN----YQPFAAGNRKCIAYK 64
D + I A +RDP +E PD FN R E G ++ + F +G C+
Sbjct: 337 DTIVFCMIGAANRDPEAFEQPDVFNIHR---EDLGIKSAFSGAARHLAFGSGIHNCVGTA 393
Query: 65 YAMLQMKIVISTVL 78
+A +++IV + VL
Sbjct: 394 FAKNEIEIVANIVL 407
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 15 YIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYK 64
++Y++ R+ ++ P+++NP R+L + G +++ PF G R+C+ +
Sbjct: 380 FLYSLGRNAALFPRPERYNPQRWLDIR-GSGRNFHHVPFGFGMRQCLGRR 428
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
D +++Y A +RD V+ NPD+F+ RF G F G C+ A L
Sbjct: 336 DRIMLSYPSA-NRDEEVFSNPDEFDITRFPNRHLG---------FGWGAHMCLGQHLAKL 385
Query: 69 QMKIVISTVLRHFK 82
+MKI +L K
Sbjct: 386 EMKIFFEELLPKLK 399
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
D +M Y Y+ +RD V + P++F DR P + + F G +C+ + A +
Sbjct: 334 DKVVMWY-YSGNRDDEVIDRPEEFIIDRPRPRQ--------HLSFGFGIHRCVGNRLAEM 384
Query: 69 QMKIVISTVLRHF 81
Q++I+ +L F
Sbjct: 385 QLRILWEEILTRF 397
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.019, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKY-------NYQPFAAGNRKCIAYKYAMLQMKIV 73
RDP +++ D+F P+RF+ E+ K ++ + GN++C + +L ++
Sbjct: 398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLF 457
Query: 74 ISTVLRHF 81
+ + R +
Sbjct: 458 VIEIFRRY 465
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.3 bits (77), Expect = 0.019, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 21 RDPNVYENPDQFNPDRFLPEKFGKYPKY-------NYQPFAAGNRKCIAYKYAMLQMKIV 73
RDP +++ D+F P+RF+ E+ K ++ + GN++C + +L ++
Sbjct: 398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLF 457
Query: 74 ISTVLRHF 81
+ + R +
Sbjct: 458 VIEIFRRY 465
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 33.1 bits (74), Expect = 0.037, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 22 DPNVYENPDQFNPDRFLPE---------KFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKI 72
DP +++ P+ F DRFL K G KY P+ + C +A+ +K
Sbjct: 365 DPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKE 424
Query: 73 VISTVLRHFKI 83
++ T+L F +
Sbjct: 425 LVFTILTRFDV 435
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 33.1 bits (74), Expect = 0.038, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
D + ++ + +RD + +++PD+F+P R K G + + F G C+ A L
Sbjct: 329 DVMVNTWVLSANRDSDAHDDPDRFDPSR----KSGGAAQLS---FGHGVHFCLGAPLARL 381
Query: 69 QMKIVISTVLRHFKILPSPR 88
+ ++ + ++ F L R
Sbjct: 382 ENRVALEEIIARFGRLTVDR 401
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 33.1 bits (74), Expect = 0.038, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
D + ++ + +RD + +++PD+F+P R K G + + F G C+ A L
Sbjct: 309 DVMVNTWVLSANRDSDAHDDPDRFDPSR----KSGGAAQLS---FGHGVHFCLGAPLARL 361
Query: 69 QMKIVISTVLRHFKILPSPR 88
+ ++ + ++ F L R
Sbjct: 362 ENRVALEEIIARFGRLTVDR 381
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 32.7 bits (73), Expect = 0.051, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A +RDP+++ NPD F+ R + F G+ C+ A L+ +I I+T+
Sbjct: 311 AANRDPSIFTNPDVFDITR---------SPNPHLSFGHGHHVCLGSSLARLEAQIAINTL 361
Query: 78 LRHFKIL 84
L+ L
Sbjct: 362 LQRMPSL 368
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 12 IMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMK 71
++ Y+ + +RD ++ PD F K G+ + + F G C+ A L+
Sbjct: 257 VIVYLGSANRDETFFDEPDLF--------KIGR--REMHLAFGIGIHMCLGAPLARLEAS 306
Query: 72 IVISTVLRHFK 82
I ++ +L HFK
Sbjct: 307 IALNDILNHFK 317
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Query: 15 YIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQP---FAAGNRKCIAYKYAMLQMK 71
+I + +RD V+ + ++F PDR N P F +G C+ A L+ +
Sbjct: 281 WIASANRDEEVFHDGEKFIPDR------------NPNPHLSFGSGIHLCLGAPLARLEAR 328
Query: 72 IVI---STVLRHFKILPSPR 88
I I S RH +IL + +
Sbjct: 329 IAIEEFSKRFRHIEILDTEK 348
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Query: 15 YIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQP---FAAGNRKCIAYKYAMLQMK 71
+I + +RD V+ + ++F PDR N P F +G C+ A L+ +
Sbjct: 281 WIASANRDEEVFHDGEKFIPDR------------NPNPHLSFGSGIHLCLGAPLARLEAR 328
Query: 72 IVI---STVLRHFKILPSPR 88
I I S RH +IL + +
Sbjct: 329 IAIEEFSKRFRHIEILDTEK 348
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 32.0 bits (71), Expect = 0.090, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 16 IYAMHRDPNVYENPDQFNPDRF 37
+Y + DP ++++PD+F P+RF
Sbjct: 318 LYGTNHDPRLWDHPDEFRPERF 339
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 21 RDPNVYENPDQFNPDRFL--PEKFGKYPKYNYQPFAAG----NRKCIAYKYAMLQMKIVI 74
+DP V++ P+++ PDRF+ E KY ++ P N++C + +L ++ +
Sbjct: 381 KDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFV 440
Query: 75 STVLRHF 81
+ R +
Sbjct: 441 IELFRRY 447
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA +++ I M+RD YENPD F+ R G F G +C+ A
Sbjct: 312 DAVLVS-ITLMNRDAKAYENPDIFDARRNARHHVG---------FGHGIHQCLGQNLARA 361
Query: 69 QMKIVI 74
+++I +
Sbjct: 362 ELEIAL 367
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 17 YAMHRDPNVYENPDQFNPDRFL-PE-KFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVI 74
+ ++ D ++ NP +F P+RFL P+ K F G RKCI A ++ + +
Sbjct: 385 WQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFL 444
Query: 75 STVLR 79
+ +L+
Sbjct: 445 AILLQ 449
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 12 IMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMK 71
++ ++ A +RDP +++PD F P G+ P + F G C+ A +++
Sbjct: 325 VVAWLPAANRDPAEFDDPDTFLP--------GRKPN-RHITFGHGMHHCLGSALARIELS 375
Query: 72 IVI 74
+V+
Sbjct: 376 VVL 378
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 30.0 bits (66), Expect = 0.37, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A +RDP+V+ +PD+ + DR P Y G+ C A +Q ++++ T+
Sbjct: 323 AANRDPDVFPDPDRIDLDR------DPNPHLAY---GNGHHFCTGAVLARMQTELLVDTL 373
Query: 78 LRHFKILPSPR 88
L LP R
Sbjct: 374 LER---LPGLR 381
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.0 bits (66), Expect = 0.37, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 77
A +RDP+V+ +PD+ + DR P Y G+ C A +Q ++++ T+
Sbjct: 323 AANRDPDVFPDPDRIDLDR------DPNPHLAY---GNGHHFCTGAVLARMQTELLVDTL 373
Query: 78 LRHFKILPSPR 88
L LP R
Sbjct: 374 LER---LPGLR 381
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 29.6 bits (65), Expect = 0.49, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 12 IMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMK 71
IM + + D +V+ +PD F DR P ++ F G C+ + A L+++
Sbjct: 304 IMLMFESANFDESVFGDPDNFRIDR--------NPN-SHVAFGFGTHFCLGNQLARLELR 354
Query: 72 IVISTVLRHFKILPSPRYKTIDDLKYEMR 100
++ VLR P + DD +R
Sbjct: 355 LMTERVLRRL-----PDLRLADDAPVPLR 378
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 28.5 bits (62), Expect = 0.94, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 12 IMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMK 71
++ ++ + +RDP +++PD+++ R G F +G C+ A L+ +
Sbjct: 322 VLMFLGSANRDPRRWDDPDRYDITRKTSGHVG---------FGSGVHMCVGQLVARLEGE 372
Query: 72 IVISTVLR 79
+V++ + R
Sbjct: 373 VVLAALAR 380
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 9 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 68
DA ++Y+ A +RDP V+ +PD+ + F + P + F G C A L
Sbjct: 312 DAVYVSYL-AANRDPEVFPDPDRID--------FERSPN-PHVSFGFGPHYCPGGMLARL 361
Query: 69 QMKIVISTVL 78
+ ++++ VL
Sbjct: 362 ESELLVDAVL 371
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+RD VYE+PD + R ++ F G +C+ A L+++++++ ++
Sbjct: 324 NRDGTVYEDPDALDIHR---------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+RD VYE+PD + R ++ F G +C+ A L+++++++ ++
Sbjct: 324 NRDGTVYEDPDALDIHR---------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+RD VYE+PD + R ++ F G +C+ A L+++++++ ++
Sbjct: 324 NRDGTVYEDPDALDIHR---------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 20 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVL 78
+RD VYE+PD + R ++ F G +C+ A L+++++++ ++
Sbjct: 324 NRDGTVYEDPDALDIHR---------SARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
Query: 18 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQ 69
A +RDP Y+ PD F+ +R P + F AG R C+ A Q
Sbjct: 310 AANRDPRRYDRPDDFDIER------DPVPSMS---FGAGMRYCLGSYLARTQ 352
>pdb|1I6V|C Chain C, Thermus Aquaticus Core Rna Polymerase-Rifampicin Complex
Length = 1118
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFL 38
+ +HR P VY PD P R++
Sbjct: 137 VSQIHRSPGVYFTPDPARPGRYI 159
>pdb|1HQM|C Chain C, Crystal Structure Of Thermus Aquaticus Core Rna
Polymerase- Includes Complete Structure With Side-Chains
(Except For Disordered Regions)-Further Refined From
Original Deposition-Contains Additional Sequence
Information
Length = 1119
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFL 38
+ +HR P VY PD P R++
Sbjct: 137 VSQIHRSPGVYFTPDPARPGRYI 159
>pdb|1YNJ|C Chain C, Taq Rna Polymerase-Sorangicin Complex
pdb|1YNN|C Chain C, Taq Rna Polymerase-rifampicin Complex
pdb|2GHO|C Chain C, Recombinant Thermus Aquaticus Rna Polymerase For
Structural Studies
Length = 1119
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFL 38
+ +HR P VY PD P R++
Sbjct: 137 VSQIHRSPGVYFTPDPARPGRYI 159
>pdb|1L9U|C Chain C, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9U|L Chain L, Thermus Aquaticus Rna Polymerase Holoenzyme At 4 A
Resolution
pdb|1L9Z|C Chain C, Thermus Aquaticus Rna Polymerase HoloenzymeFORK-Junction
Promoter Dna Complex At 6.5 A Resolution
Length = 1118
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFL 38
+ +HR P VY PD P R++
Sbjct: 137 VSQIHRSPGVYFTPDPARPGRYI 159
>pdb|3AB1|A Chain A, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
pdb|3AB1|B Chain B, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
Length = 360
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 3 PKEKILDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIA 62
P++ I D + A+ +++ +++NPD L E KY K + F
Sbjct: 58 PEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNV 117
Query: 63 YKYAMLQMKIVISTVLRHFKILPSPRYKTIDDL 95
Y+ ++I+ L F+ P+ ID L
Sbjct: 118 YR----SRAVLIAAGLGAFEPRKLPQLGNIDHL 146
>pdb|1IW7|C Chain C, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1IW7|M Chain M, Crystal Structure Of The Rna Polymerase Holoenzyme From
Thermus Thermophilus At 2.6a Resolution
pdb|1SMY|C Chain C, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1SMY|M Chain M, Structural Basis For Transcription Regulation By Alarmone
Ppgpp
pdb|1ZYR|C Chain C, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|1ZYR|M Chain M, Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Streptolydigin
pdb|2A68|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A68|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifabutin
pdb|2A69|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A69|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Rifapentin
pdb|2A6E|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6E|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme
pdb|2A6H|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2A6H|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Sterptolydigin
pdb|2CW0|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2CW0|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme At 3.3 Angstroms Resolution
pdb|2BE5|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2BE5|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Inhibitor Tagetitoxin
pdb|2O5I|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5I|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Elongation Complex
pdb|2O5J|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2O5J|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog
pdb|2PPB|C Chain C, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|2PPB|M Chain M, Crystal Structure Of The T. Thermophilus Rnap Polymerase
Elongation Complex With The Ntp Substrate Analog And
Antibiotic Streptolydigin
pdb|3DXJ|C Chain C, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3DXJ|M Chain M, Crystal Structure Of Thermus Thermophilus Rna Polymerase
Holoenzyme In Complex With The Antibiotic Myxopyronin
pdb|3EQL|C Chain C, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3EQL|M Chain M, Crystal Structure Of The T. Thermophilus Rna Polymerase
Holoenzyme In Complex With Antibiotic Myxopyronin
pdb|3AOH|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOH|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 1)
pdb|3AOI|C Chain C, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|H Chain H, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|3AOI|M Chain M, Rna Polymerase-Gfh1 Complex (Crystal Type 2)
pdb|4G7H|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7H|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex
pdb|4G7O|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7O|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 2 Nt Of Rna
pdb|4G7Z|C Chain C, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4G7Z|M Chain M, Crystal Structure Of Thermus Thermophilus Transcription
Initiation Complex Containing 5-Bru At Template-Strand
Position +1
pdb|4GZY|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
pdb|4GZZ|C Chain C, Crystal Structures Of Bacterial Rna Polymerase Paused
Elongation Complexes
Length = 1119
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 16 IYAMHRDPNVYENPDQFNPDRFL 38
+ +HR P VY PD P R++
Sbjct: 137 VSQIHRSPGVYFTPDPARPGRYI 159
>pdb|4FOM|A Chain A, Crystal Structure Of Human Nectin-3 Full Ectodomain
(D1-D3)
Length = 308
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 74 ISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNG 108
I+ V++H + RY I D++Y V++T Y+G
Sbjct: 187 ITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDG 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.141 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,807,273
Number of Sequences: 62578
Number of extensions: 151555
Number of successful extensions: 418
Number of sequences better than 100.0: 158
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 235
Number of HSP's gapped (non-prelim): 161
length of query: 117
length of database: 14,973,337
effective HSP length: 80
effective length of query: 37
effective length of database: 9,967,097
effective search space: 368782589
effective search space used: 368782589
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)