Query psy9539
Match_columns 222
No_of_seqs 121 out of 1755
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 22:10:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158|consensus 100.0 1.1E-44 2.5E-49 318.4 17.8 195 18-215 264-499 (499)
2 KOG0157|consensus 100.0 4.8E-41 1E-45 300.4 16.9 193 18-215 270-496 (497)
3 KOG0156|consensus 100.0 7.3E-41 1.6E-45 296.6 17.6 203 3-215 249-488 (489)
4 PLN02971 tryptophan N-hydroxyl 100.0 3.2E-40 7E-45 298.3 18.4 194 20-217 304-536 (543)
5 PLN02500 cytochrome P450 90B1 100.0 6.1E-40 1.3E-44 293.1 17.6 188 20-213 262-488 (490)
6 PLN02169 fatty acid (omega-1)- 100.0 1.2E-39 2.5E-44 291.9 18.3 173 31-215 297-500 (500)
7 PLN02290 cytokinin trans-hydro 100.0 1.1E-39 2.3E-44 293.2 17.9 176 31-215 312-515 (516)
8 PLN02738 carotene beta-ring hy 100.0 2.5E-39 5.5E-44 295.9 20.1 193 20-218 373-598 (633)
9 PLN02394 trans-cinnamate 4-mon 100.0 2.1E-39 4.5E-44 290.4 18.9 193 20-215 273-502 (503)
10 PLN02426 cytochrome P450, fami 100.0 1.9E-39 4.1E-44 290.7 17.7 194 19-215 276-500 (502)
11 PLN00168 Cytochrome P450; Prov 100.0 2.6E-39 5.7E-44 290.9 18.7 183 31-216 302-518 (519)
12 PLN03195 fatty acid omega-hydr 100.0 1.5E-39 3.3E-44 292.2 16.3 192 20-215 270-516 (516)
13 PLN02655 ent-kaurene oxidase 100.0 3.9E-39 8.5E-44 286.3 18.8 190 20-215 244-464 (466)
14 PF00067 p450: Cytochrome P450 100.0 7.2E-40 1.6E-44 285.9 13.1 189 19-211 237-463 (463)
15 PLN00110 flavonoid 3',5'-hydro 100.0 5.4E-39 1.2E-43 287.9 17.9 192 20-215 266-497 (504)
16 PLN02183 ferulate 5-hydroxylas 100.0 7.9E-39 1.7E-43 287.6 17.7 182 30-214 299-511 (516)
17 KOG0159|consensus 100.0 3.9E-39 8.5E-44 279.5 14.9 183 29-216 310-519 (519)
18 PTZ00404 cytochrome P450; Prov 100.0 6.5E-39 1.4E-43 285.9 16.7 186 20-214 262-482 (482)
19 PLN03234 cytochrome P450 83B1; 100.0 1E-38 2.2E-43 285.8 17.9 182 31-214 284-498 (499)
20 PLN02774 brassinosteroid-6-oxi 100.0 1.1E-38 2.4E-43 283.2 17.6 186 20-213 243-462 (463)
21 PLN02302 ent-kaurenoic acid ox 100.0 1.2E-38 2.6E-43 284.3 17.2 191 19-217 264-490 (490)
22 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-38 3.1E-43 281.6 17.0 186 20-215 232-450 (452)
23 PLN03018 homomethionine N-hydr 100.0 4.2E-38 9E-43 283.8 19.5 193 20-216 291-525 (534)
24 PLN02687 flavonoid 3'-monooxyg 100.0 3.8E-38 8.2E-43 283.3 18.6 182 31-215 293-509 (517)
25 PLN02987 Cytochrome P450, fami 100.0 5.1E-38 1.1E-42 279.5 18.1 190 20-215 249-469 (472)
26 PLN03112 cytochrome P450 famil 100.0 6.3E-38 1.4E-42 281.6 18.0 196 20-218 273-511 (514)
27 PLN02196 abscisic acid 8'-hydr 100.0 7.7E-38 1.7E-42 277.8 17.2 186 20-214 246-462 (463)
28 PLN02936 epsilon-ring hydroxyl 100.0 1.6E-37 3.4E-42 277.5 17.6 191 20-217 260-484 (489)
29 PLN02966 cytochrome P450 83A1 100.0 1.6E-36 3.4E-41 271.9 17.9 157 31-187 285-471 (502)
30 KOG0684|consensus 100.0 3.4E-36 7.4E-41 256.3 13.1 195 17-215 249-485 (486)
31 PLN02648 allene oxide synthase 100.0 4E-31 8.8E-36 235.1 16.8 158 28-188 264-464 (480)
32 COG2124 CypX Cytochrome P450 [ 100.0 2.1E-31 4.5E-36 233.3 12.9 180 17-214 211-410 (411)
33 PF08492 SRP72: SRP72 RNA-bind 55.4 7.3 0.00016 24.5 1.2 7 131-137 44-50 (59)
34 PF09201 SRX: SRX; InterPro: 45.3 18 0.00038 26.9 2.1 23 156-178 18-40 (148)
35 PF12508 DUF3714: Protein of u 35.0 42 0.00092 26.6 2.9 43 69-112 52-94 (200)
36 COG1759 5-formaminoimidazole-4 32.2 88 0.0019 26.9 4.5 26 144-172 326-351 (361)
37 TIGR03779 Bac_Flav_CT_M Bacter 26.2 34 0.00073 30.3 1.1 18 95-112 280-297 (410)
38 KOG3506|consensus 25.1 34 0.00073 21.1 0.6 11 149-159 12-22 (56)
39 PF12444 Sox_N: Sox developmen 24.4 51 0.0011 22.3 1.5 21 166-186 60-80 (84)
40 PF07797 DUF1639: Protein of u 21.4 1.6E+02 0.0035 17.8 3.1 25 31-55 1-39 (50)
No 1
>KOG0158|consensus
Probab=100.00 E-value=1.1e-44 Score=318.38 Aligned_cols=195 Identities=27% Similarity=0.540 Sum_probs=173.2
Q ss_pred ccccccccc----cc--------C-CCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCC
Q psy9539 18 NRKITMIDL----QK--------D-GFSEEQLMQETITLI---------------------------IFEELHSIFGDDK 57 (222)
Q Consensus 18 ~~~~d~l~~----~~--------~-g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~ 57 (222)
..+.|++++ .. + .+|.+||+++|+.++ +++||++++.+.
T Consensus 264 ~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~- 342 (499)
T KOG0158|consen 264 IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEK- 342 (499)
T ss_pred CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccc-
Confidence 456888888 11 2 399999999999998 999999997762
Q ss_pred CCCCChhhhcCCHHHHHHHHhhcccCCCCCcceeeeccCeeeC-CEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCC
Q psy9539 58 ERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIG-DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFL 136 (222)
Q Consensus 58 ~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~ 136 (222)
..++++.+.+|+||++||+||||+||+.+.+.|.+++|++++ ++.||+|+.|.++.+++||||++||||++|+||||.
T Consensus 343 -~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~ 421 (499)
T KOG0158|consen 343 -EGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFE 421 (499)
T ss_pred -CCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCC
Confidence 339999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 137 PEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 137 ~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
+++....++..|+|||.|||+|+|.+||++|++++|+.||++|+++..+... .+......++++.|.+|+++++++|.
T Consensus 422 ~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~-~~~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 422 EENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI-IPLEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred CCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc-CcccCCccceeeecCCceEEEEEeCC
Confidence 8876677899999999999999999999999999999999999999988322 21111234888999999999999984
No 2
>KOG0157|consensus
Probab=100.00 E-value=4.8e-41 Score=300.40 Aligned_cols=193 Identities=36% Similarity=0.670 Sum_probs=168.4
Q ss_pred cccccccc-c---ccCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhh
Q psy9539 18 NRKITMID-L---QKDGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEEL 66 (222)
Q Consensus 18 ~~~~d~l~-~---~~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~ 66 (222)
....|+|+ + ....+++++|++++.+++ +++|+.+++++. .........
T Consensus 270 ~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~-~~~~~~~~~ 348 (497)
T KOG0157|consen 270 KKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNR-DDKWEVEKL 348 (497)
T ss_pred chhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCCChhhh
Confidence 45688888 4 223599999999999998 999999999853 122233333
Q ss_pred cCCHHHHHHHHhhcccCCCCCcceeeeccCeee-CCEeeCCCcEEEecchhhhcCCCCCC-CCCCcCCCCCCCCCCC-CC
Q psy9539 67 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVYE-NPDQFNPDRFLPEKFG-KY 143 (222)
Q Consensus 67 ~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~R~~~~~~~-~~ 143 (222)
.+|+|+++||+|||||||++|...|.+.+|+.+ +||.||+|+.|.++.+.+|||+.+|+ ||++|+|+||.++... ..
T Consensus 349 ~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~ 428 (497)
T KOG0157|consen 349 DQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKR 428 (497)
T ss_pred hhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCC
Confidence 369999999999999999999999999999999 58999999999999999999999995 9999999999975433 45
Q ss_pred CCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 144 PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 144 ~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
++++|+|||+|+|+|+|++||++|++++++.|+++|+|++..+.. ..+....+++|.+|++|++++|.
T Consensus 429 ~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~----~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 429 HPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK----PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred CCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC----ceeeeEEEEEecCCeEEEEEeCC
Confidence 689999999999999999999999999999999999999987753 56678899999999999999986
No 3
>KOG0156|consensus
Probab=100.00 E-value=7.3e-41 Score=296.57 Aligned_cols=203 Identities=27% Similarity=0.523 Sum_probs=171.4
Q ss_pred chhhhhhccccCCCCccccccccc-----c--cCC-CCHHHHHHHHHHHH---------------------------HHH
Q psy9539 3 KTQKQHEDSNNNGVPNRKITMIDL-----Q--KDG-FSEEQLMQETITLI---------------------------IFE 47 (222)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~d~l~~-----~--~~g-~~~~ei~~~~~~~~---------------------------~~~ 47 (222)
+.++++.++. +. +...|++|. . ..+ +|+++|...++.++ +++
T Consensus 249 ~~i~eh~~~~-~~--~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qe 325 (489)
T KOG0156|consen 249 RIIDEHREKI-GD--EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQE 325 (489)
T ss_pred HHHHHHHhhh-cc--CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4455655554 21 222788887 2 222 89999999999888 999
Q ss_pred HHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccCCCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCC
Q psy9539 48 ELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYEN 126 (222)
Q Consensus 48 Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~ 126 (222)
||++++|. ++.++.++..++|||+|+|+|++|+||++|. ++|.+++|+.++||.||+||.|.++.|++|+||.+|+|
T Consensus 326 EId~vvG~--~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~d 403 (489)
T KOG0156|consen 326 EIDEVVGK--GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWED 403 (489)
T ss_pred HHHHHhCC--CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCC
Confidence 99999997 4559999999999999999999999999997 68999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCC-CCCCCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCC
Q psy9539 127 PDQFNPDRFLPEK-FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYN 205 (222)
Q Consensus 127 p~~f~p~R~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~ 205 (222)
|++|+||||++++ ... ....++|||.|+|+|+|..+|++++.+++|.|+++|+|++..+. + +.... +.++....
T Consensus 404 P~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~--~-d~~e~-~~~~~~~~ 478 (489)
T KOG0156|consen 404 PEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGK--V-DMEEA-GLTLKKKK 478 (489)
T ss_pred ccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCC--C-CCccc-ccceecCC
Confidence 9999999999974 444 78899999999999999999999999999999999999998772 2 33333 35666666
Q ss_pred CeeeecccCc
Q psy9539 206 GIYVPPPSQI 215 (222)
Q Consensus 206 ~~~v~~~~r~ 215 (222)
++.+...+|.
T Consensus 479 pl~~~~~~r~ 488 (489)
T KOG0156|consen 479 PLKAVPVPRL 488 (489)
T ss_pred cceeeeecCC
Confidence 7777777664
No 4
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=3.2e-40 Score=298.26 Aligned_cols=194 Identities=18% Similarity=0.375 Sum_probs=164.9
Q ss_pred ccccccc-----cc--CC-CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChh
Q psy9539 20 KITMIDL-----QK--DG-FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYE 64 (222)
Q Consensus 20 ~~d~l~~-----~~--~g-~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~ 64 (222)
..|+++. .+ .+ +++++|++++++++ +++||+++++. .+.++++
T Consensus 304 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~--~~~~t~~ 381 (543)
T PLN02971 304 IEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK--ERFVQES 381 (543)
T ss_pred CcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHH
Confidence 4688877 12 22 99999999999888 99999999986 5678999
Q ss_pred hhcCCHHHHHHHHhhcccCCCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCC--
Q psy9539 65 ELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG-- 141 (222)
Q Consensus 65 ~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~-- 141 (222)
++.+|||++|||+|++|++|+++. ++|.+.+|++++||.||||+.|.++.|++|+||++|+||++|+||||+++...
T Consensus 382 d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~ 461 (543)
T PLN02971 382 DIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVT 461 (543)
T ss_pred HhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCcccc
Confidence 999999999999999999999987 68999999999999999999999999999999999999999999999975432
Q ss_pred -CCCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCccc
Q psy9539 142 -KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQINE 217 (222)
Q Consensus 142 -~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~ 217 (222)
....+.++|||.|+|+|+|++||++|+++++|.|+++|+|++.++.... ......+ ++.-.+++.+.+++|..+
T Consensus 462 ~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 536 (543)
T PLN02971 462 LTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRV-ELMESSH-DMFLSKPLVMVGELRLSE 536 (543)
T ss_pred ccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCc-chhhhcC-cccccccceeeeeecCCc
Confidence 1245689999999999999999999999999999999999988654322 3333334 554555999999999543
No 5
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=6.1e-40 Score=293.10 Aligned_cols=188 Identities=22% Similarity=0.386 Sum_probs=159.4
Q ss_pred ccccccc--ccCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCC---CCCCCCChhhhc
Q psy9539 20 KITMIDL--QKDGFSEEQLMQETITLI---------------------------IFEELHSIFGD---DKERCPTYEELQ 67 (222)
Q Consensus 20 ~~d~l~~--~~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~---~~~~~~~~~~~~ 67 (222)
..|+++. ...++++++|++++++++ +++|++++++. .....++++++.
T Consensus 262 ~~d~l~~ll~~~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~ 341 (490)
T PLN02500 262 EDDLLGWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYK 341 (490)
T ss_pred cchHHHHHHhccCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhc
Confidence 4688888 333499999999999887 88999988742 113458999999
Q ss_pred CCHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCC-----
Q psy9539 68 NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK----- 142 (222)
Q Consensus 68 ~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~----- 142 (222)
++||++|||+|++|++|+++.+.|.+.+|++++||.||+|+.|.++.+++|+||++|+||++|+||||+++....
T Consensus 342 ~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~ 421 (490)
T PLN02500 342 KMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGS 421 (490)
T ss_pred cCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccc
Confidence 999999999999999999998889999999999999999999999999999999999999999999999754221
Q ss_pred --CCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeeccc
Q psy9539 143 --YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPS 213 (222)
Q Consensus 143 --~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~ 213 (222)
..++.++|||.|+|+|+|++||++|+++++|.|+++|+|++.++.. ... .. ...+.++++|++++
T Consensus 422 ~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~---~~~--~~-~~~~~~~l~~~~~~ 488 (490)
T PLN02500 422 SSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ---AFA--FP-FVDFPKGLPIRVRR 488 (490)
T ss_pred cCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc---cee--cc-cccCCCCceEEEEe
Confidence 2456899999999999999999999999999999999999877643 121 11 23555799999875
No 6
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=1.2e-39 Score=291.95 Aligned_cols=173 Identities=24% Similarity=0.452 Sum_probs=151.4
Q ss_pred CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccC
Q psy9539 31 FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMY 83 (222)
Q Consensus 31 ~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 83 (222)
+++++|.+++++++ +++||++++ +++++.++||++||++|+||||
T Consensus 297 ~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~--------~~~dl~~L~Yl~avi~EtLRl~ 368 (500)
T PLN02169 297 KKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF--------DNEDLEKLVYLHAALSESMRLY 368 (500)
T ss_pred CChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC--------CHHHHhcCHHHHHHHHHHHhcC
Confidence 78999999999988 777777653 4688999999999999999999
Q ss_pred CCCCcceeeeccCeee-CCEeeCCCcEEEecchhhhcCCCCC-CCCCCcCCCCCCCCCCCCC--CCCCcccCCCCCcCCh
Q psy9539 84 PPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKY--PKYNYQPFAAGNRKCI 159 (222)
Q Consensus 84 ~~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~--~~~~~~~Fg~G~r~C~ 159 (222)
|++|...|.+..|.++ +|+.||+|+.|.++.|++||||++| +||++|+||||++++.... +.+.|+|||.|+|+|+
T Consensus 369 P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~Ci 448 (500)
T PLN02169 369 PPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCL 448 (500)
T ss_pred CCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCc
Confidence 9999988887776665 9999999999999999999999999 8999999999997654332 3678999999999999
Q ss_pred hHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 160 AYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 160 G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
|++||++|+++++|.|+++|+|++.++.. +....+.++.|.+|++|++++|.
T Consensus 449 G~~~A~~e~k~~la~ll~~f~~~~~~~~~----~~~~~~~~l~~~~gl~l~l~~~~ 500 (500)
T PLN02169 449 GKHLALLQMKIVALEIIKNYDFKVIEGHK----IEAIPSILLRMKHGLKVTVTKKI 500 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHCEEEEcCCCC----cccccceEEecCCCEEEEEEeCC
Confidence 99999999999999999999999875432 34456688899999999999874
No 7
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1.1e-39 Score=293.22 Aligned_cols=176 Identities=30% Similarity=0.568 Sum_probs=157.6
Q ss_pred CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccC
Q psy9539 31 FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMY 83 (222)
Q Consensus 31 ~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 83 (222)
+++++|.+++++++ +++|++++++. ..+++++++++||++|||+|++|++
T Consensus 312 l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~---~~~~~~~l~~lpYl~avi~EtlRl~ 388 (516)
T PLN02290 312 LNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG---ETPSVDHLSKLTLLNMVINESLRLY 388 (516)
T ss_pred CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHHHcC
Confidence 88999999998887 89999999885 4789999999999999999999999
Q ss_pred CCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCC-CCCCCcCCCCCCCCCCCCCCCCCcccCCCCCcCChhHH
Q psy9539 84 PPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYK 162 (222)
Q Consensus 84 ~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 162 (222)
|+++.++|.+.+|++++|+.||+||.|.++.+.+|+||++| +||++|+||||++... .....++|||.|+|+|+|++
T Consensus 389 p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~--~~~~~~~pFG~G~R~C~G~~ 466 (516)
T PLN02290 389 PPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF--APGRHFIPFAAGPRNCIGQA 466 (516)
T ss_pred CCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC--CCCCeEecCCCCCCCCccHH
Confidence 99988899999999999999999999999999999999999 8999999999995421 23457999999999999999
Q ss_pred HHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 163 YAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 163 la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
||++|++++++.|+++|++++.++.. .....++++.|.++++|++++|.
T Consensus 467 lA~~el~l~la~ll~~f~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~ 515 (516)
T PLN02290 467 FAMMEAKIILAMLISKFSFTISDNYR----HAPVVVLTIKPKYGVQVCLKPLN 515 (516)
T ss_pred HHHHHHHHHHHHHHHhceEeeCCCcc----cCccceeeecCCCCCeEEEEeCC
Confidence 99999999999999999999876532 12234688899999999999886
No 8
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=2.5e-39 Score=295.92 Aligned_cols=193 Identities=25% Similarity=0.526 Sum_probs=168.0
Q ss_pred ccccccc--cc-CCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCC
Q psy9539 20 KITMIDL--QK-DGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNM 69 (222)
Q Consensus 20 ~~d~l~~--~~-~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l 69 (222)
..|+++. .. ..+++++|++++++++ +++|+++++++ ..++++++.+|
T Consensus 373 ~~dil~~Ll~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~---~~~t~edL~kL 449 (633)
T PLN02738 373 DPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD---RFPTIEDMKKL 449 (633)
T ss_pred cchHHHHHHHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---CCCCHHHHccC
Confidence 4577776 22 2399999999999888 99999999873 56899999999
Q ss_pred HHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCC---CCCCCC
Q psy9539 70 PVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF---GKYPKY 146 (222)
Q Consensus 70 ~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~---~~~~~~ 146 (222)
|||+|||+|+|||||+++.+.|.+.+|++++||.||+||.|.++.+.+|+||++||||++|+||||+.+.. ......
T Consensus 450 PYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~ 529 (633)
T PLN02738 450 KYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNF 529 (633)
T ss_pred HHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCC
Confidence 99999999999999999988899999999999999999999999999999999999999999999985321 123466
Q ss_pred CcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCccch
Q psy9539 147 NYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQINEE 218 (222)
Q Consensus 147 ~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~~ 218 (222)
.++|||.|+|.|+|++||++|+++++|.|+++|+|++.++.. ++....+.++.|.+++++++++|..+-
T Consensus 530 ~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~---~~~~~~~~~~~p~~~l~v~l~~R~~~~ 598 (633)
T PLN02738 530 SYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP---PVKMTTGATIHTTEGLKMTVTRRTKPP 598 (633)
T ss_pred ceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC---CcccccceEEeeCCCcEEEEEECCCCC
Confidence 899999999999999999999999999999999999987643 344445678889999999999998653
No 9
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=2.1e-39 Score=290.43 Aligned_cols=193 Identities=25% Similarity=0.469 Sum_probs=162.3
Q ss_pred ccccccc----ccCC-CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhc
Q psy9539 20 KITMIDL----QKDG-FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQ 67 (222)
Q Consensus 20 ~~d~l~~----~~~g-~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~ 67 (222)
..|+++. ..+| +++++|..++..++ +++||+++++. +..++++++.
T Consensus 273 ~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~--~~~~~~~~l~ 350 (503)
T PLN02394 273 LKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP--GNQVTEPDTH 350 (503)
T ss_pred hhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC--CCCCCHhHHh
Confidence 4577766 2233 99999999887775 99999999875 4567889999
Q ss_pred CCHHHHHHHHhhcccCCCCCcc-eeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCC---CC
Q psy9539 68 NMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG---KY 143 (222)
Q Consensus 68 ~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~---~~ 143 (222)
++||++|||+|++|++|+++.. .|.+.+|++++||.||+||.|.++.+.+|+||++|+||++|+||||+++... ..
T Consensus 351 ~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~ 430 (503)
T PLN02394 351 KLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANG 430 (503)
T ss_pred hCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccC
Confidence 9999999999999999999875 6888899999999999999999999999999999999999999999975421 12
Q ss_pred CCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccce-eEEEEeCCCeeeecccCc
Q psy9539 144 PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEM-RVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 144 ~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~v~~~~r~ 215 (222)
....++|||.|+|+|+|++||++|+++++|.|+++|++++.++.... +..... ++.+....++.+++.||+
T Consensus 431 ~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 431 NDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKI-DVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred CCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcC-ccccccCceeeccCCCceEEeecCC
Confidence 45689999999999999999999999999999999999987765322 223233 356645559999999996
No 10
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1.9e-39 Score=290.65 Aligned_cols=194 Identities=21% Similarity=0.362 Sum_probs=165.9
Q ss_pred cccccccc-ccCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCH
Q psy9539 19 RKITMIDL-QKDGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMP 70 (222)
Q Consensus 19 ~~~d~l~~-~~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~ 70 (222)
...|+++. ...+.++++|.+++++++ +++|++++++.. ...++++++.++|
T Consensus 276 ~~~dll~~ll~~~~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-~~~~t~~~l~~Lp 354 (502)
T PLN02426 276 ASKDLLSRFMASINDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN-QEAASFEEMKEMH 354 (502)
T ss_pred CcchHHHHHHhcCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC-CCCCCHHHHhcCh
Confidence 35789988 333468899999998887 899999988752 3458999999999
Q ss_pred HHHHHHHhhcccCCCCCcceeeeccCeee-CCEeeCCCcEEEecchhhhcCCCCC-CCCCCcCCCCCCCCCC-CCCCCCC
Q psy9539 71 VLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKF-GKYPKYN 147 (222)
Q Consensus 71 ~l~a~i~E~lRl~~~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~-~~~~~~~ 147 (222)
||+|||+|++|++|+++...|.+.+|.++ +|+.||+||.|.++.+.+|||+++| |||++|+||||+++.. .....+.
T Consensus 355 Yl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~ 434 (502)
T PLN02426 355 YLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFK 434 (502)
T ss_pred HHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcc
Confidence 99999999999999999888999988887 8999999999999999999999999 9999999999997431 1224567
Q ss_pred cccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 148 YQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 148 ~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
++|||.|+|+|+|++||++|++++++.|+++|++++..+... .+....+.++.|.++++|++++|.
T Consensus 435 ~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 435 YPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNR--APRFAPGLTATVRGGLPVRVRERV 500 (502)
T ss_pred cCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCC--CCcccceeEEecCCCEEEEEEEcc
Confidence 999999999999999999999999999999999998654321 234456788999999999999884
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.6e-39 Score=290.90 Aligned_cols=183 Identities=23% Similarity=0.443 Sum_probs=159.5
Q ss_pred CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccC
Q psy9539 31 FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMY 83 (222)
Q Consensus 31 ~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 83 (222)
+++++|.+++++++ +++||+++++.. ...++.+++.++||++|||+|++|++
T Consensus 302 lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~-~~~~~~~~~~~lpyl~avi~EtlRl~ 380 (519)
T PLN00168 302 LTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDD-QEEVSEEDVHKMPYLKAVVLEGLRKH 380 (519)
T ss_pred CCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCCHHHhhCChHHHHHHHHHhhcC
Confidence 99999999999887 899999998742 35689999999999999999999999
Q ss_pred CCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCC------CCCCCCCcccCCCCCc
Q psy9539 84 PPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF------GKYPKYNYQPFAAGNR 156 (222)
Q Consensus 84 ~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~------~~~~~~~~~~Fg~G~r 156 (222)
|+++. +.|.+.+|++++||.||+|+.|.++.+.+|+||++||||++|+||||+++.. .....+.++|||.|+|
T Consensus 381 p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R 460 (519)
T PLN00168 381 PPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRR 460 (519)
T ss_pred CCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCC
Confidence 99986 5899999999999999999999999999999999999999999999997421 1123468999999999
Q ss_pred CChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCcc
Q psy9539 157 KCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQIN 216 (222)
Q Consensus 157 ~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~ 216 (222)
+|+|++||++|++++++.|+++|+|++.++.. + +.....++++.+.+++++++++|+.
T Consensus 461 ~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 461 ICAGLGIAMLHLEYFVANMVREFEWKEVPGDE-V-DFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHccceeCCCCc-C-ChhhhceeEEeecCCcEEEEEeccC
Confidence 99999999999999999999999999976533 1 2323345677888899999999875
No 12
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=1.5e-39 Score=292.24 Aligned_cols=192 Identities=22% Similarity=0.416 Sum_probs=160.8
Q ss_pred ccccccc-----cc--CCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCC---------
Q psy9539 20 KITMIDL-----QK--DGFSEEQLMQETITLI---------------------------IFEELHSIFGDD--------- 56 (222)
Q Consensus 20 ~~d~l~~-----~~--~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~--------- 56 (222)
..|+++. .. .++++++|++++++++ +++|++++++..
T Consensus 270 ~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~ 349 (516)
T PLN03195 270 KHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDS 349 (516)
T ss_pred cccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccccccc
Confidence 4577765 11 2399999999999988 889999876431
Q ss_pred ---------CCCCCChhhhcCCHHHHHHHHhhcccCCCCCcceeeeccCeee-CCEeeCCCcEEEecchhhhcCCCCC-C
Q psy9539 57 ---------KERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-E 125 (222)
Q Consensus 57 ---------~~~~~~~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~ 125 (222)
....++++++.++|||+|||+|+||++|+++...|.+.+|.++ +|+.||+|+.|.++.+.+|+||++| +
T Consensus 350 ~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~ 429 (516)
T PLN03195 350 QSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGP 429 (516)
T ss_pred chhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhcc
Confidence 0234789999999999999999999999999888777777666 8999999999999999999999999 9
Q ss_pred CCCCcCCCCCCCCCC-CCCCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeC
Q psy9539 126 NPDQFNPDRFLPEKF-GKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFY 204 (222)
Q Consensus 126 ~p~~f~p~R~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~ 204 (222)
||++|+||||+++.. ....++.|+|||.|+|+|+|++||++|+++++|.|+++|++++.++.. .......++.|.
T Consensus 430 dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~----~~~~~~~~~~~~ 505 (516)
T PLN03195 430 DAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP----VKYRMMTILSMA 505 (516)
T ss_pred ChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc----ceeeeeeEEecC
Confidence 999999999996432 223456799999999999999999999999999999999999875432 333455678899
Q ss_pred CCeeeecccCc
Q psy9539 205 NGIYVPPPSQI 215 (222)
Q Consensus 205 ~~~~v~~~~r~ 215 (222)
++++|++++|.
T Consensus 506 ~~~~v~~~~r~ 516 (516)
T PLN03195 506 NGLKVTVSRRS 516 (516)
T ss_pred CCEEEEEEeCC
Confidence 99999999874
No 13
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=3.9e-39 Score=286.30 Aligned_cols=190 Identities=27% Similarity=0.464 Sum_probs=166.1
Q ss_pred ccccccc--c-cCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCC
Q psy9539 20 KITMIDL--Q-KDGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNM 69 (222)
Q Consensus 20 ~~d~l~~--~-~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l 69 (222)
..|+++. . ...+++++|++++++++ +++||+++++. ..++.+++.++
T Consensus 244 ~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~l~~l 320 (466)
T PLN02655 244 RDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD---ERVTEEDLPNL 320 (466)
T ss_pred cccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC---CCCCHHHHhcC
Confidence 3588888 2 23399999999999887 89999999885 34899999999
Q ss_pred HHHHHHHHhhcccCCCCCcc-eeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCc
Q psy9539 70 PVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY 148 (222)
Q Consensus 70 ~~l~a~i~E~lRl~~~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~ 148 (222)
||++||++|+||++|+++.. +|.+.+|++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||+++.......+.+
T Consensus 321 ~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~~~~~ 400 (466)
T PLN02655 321 PYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKT 400 (466)
T ss_pred hHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccCCcccc
Confidence 99999999999999998875 79999999999999999999999999999999999999999999999765333345789
Q ss_pred ccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 149 QPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 149 ~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
+|||.|+|.|+|++||+.+++++++.|+++|++++.++.. ......++++.+.+++.+.+++|-
T Consensus 401 ~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~ 464 (466)
T PLN02655 401 MAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE---EKEDTVQLTTQKLHPLHAHLKPRG 464 (466)
T ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc---cccchhheeEeecCCcEEEEeecC
Confidence 9999999999999999999999999999999999976643 223356778889999999998875
No 14
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=7.2e-40 Score=285.93 Aligned_cols=189 Identities=34% Similarity=0.636 Sum_probs=158.3
Q ss_pred cccccccc----c--c---CCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCC
Q psy9539 19 RKITMIDL----Q--K---DGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPT 62 (222)
Q Consensus 19 ~~~d~l~~----~--~---~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~ 62 (222)
...|+++. . . .++++++|+++++.++ +++|++++++. ...++
T Consensus 237 ~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~ 314 (463)
T PF00067_consen 237 SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD--GREIT 314 (463)
T ss_dssp SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT--SSSHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccc
Confidence 45677766 2 1 2599999999999987 89999999865 45788
Q ss_pred hhhhcCCHHHHHHHHhhcccCCCCC-cceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCC-
Q psy9539 63 YEELQNMPVLDRCIKEVLRMYPPGY-IIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF- 140 (222)
Q Consensus 63 ~~~~~~l~~l~a~i~E~lRl~~~~~-~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~- 140 (222)
.+++.++|||+|||+|++|++|+++ .++|.+.+|++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++...
T Consensus 315 ~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~ 394 (463)
T PF00067_consen 315 FEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGI 394 (463)
T ss_dssp HHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTST
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999 68899999999999999999999999999999999999999999999998875
Q ss_pred CCCCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeec
Q psy9539 141 GKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPP 211 (222)
Q Consensus 141 ~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~ 211 (222)
.......++|||.|+|.|+|++||++|+++++|.|+++|+|++.++.... .......++.|..++.|.|
T Consensus 395 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 463 (463)
T PF00067_consen 395 SNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPE--PQEQQNGFLLPPKPLKVKF 463 (463)
T ss_dssp BCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGG--EEECSCSSSEEESSSEEEE
T ss_pred cccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCC--CccccCceEeeCCCcEEeC
Confidence 34578899999999999999999999999999999999999997765421 2222223455555777654
No 15
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=5.4e-39 Score=287.94 Aligned_cols=192 Identities=23% Similarity=0.453 Sum_probs=164.7
Q ss_pred ccccccc--c----cC--CCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChh
Q psy9539 20 KITMIDL--Q----KD--GFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYE 64 (222)
Q Consensus 20 ~~d~l~~--~----~~--g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~ 64 (222)
..|+++. . .. ++++++|+++++.++ +++|++++++. ...++++
T Consensus 266 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~ 343 (504)
T PLN00110 266 NPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR--NRRLVES 343 (504)
T ss_pred CCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHH
Confidence 3577777 1 12 399999999998887 89999999875 4668999
Q ss_pred hhcCCHHHHHHHHhhcccCCCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCC
Q psy9539 65 ELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKY 143 (222)
Q Consensus 65 ~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~ 143 (222)
++.++||++|||+|++|++|+++. ++|.+.+|++++||.||+|+.|.++.+.+|+||++|+||++|+||||+++.....
T Consensus 344 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~ 423 (504)
T PLN00110 344 DLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKI 423 (504)
T ss_pred HhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCccc
Confidence 999999999999999999999987 7899999999999999999999999999999999999999999999996532211
Q ss_pred ----CCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 144 ----PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 144 ----~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
....++|||.|+|.|+|++||++|+++++|.|+++|++++.++.. . ......+.++.|..++.+++++|.
T Consensus 424 ~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~r~ 497 (504)
T PLN00110 424 DPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVE-L-NMDEAFGLALQKAVPLSAMVTPRL 497 (504)
T ss_pred ccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCc-c-CcccccccccccCCCceEeeccCC
Confidence 135799999999999999999999999999999999999876643 1 222345677789999999999994
No 16
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=7.9e-39 Score=287.63 Aligned_cols=182 Identities=22% Similarity=0.441 Sum_probs=154.7
Q ss_pred CCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhccc
Q psy9539 30 GFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRM 82 (222)
Q Consensus 30 g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl 82 (222)
++++++|++++++++ +++|++++++. .+.++.+++.++||++|||+|++|+
T Consensus 299 ~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~--~~~~~~~~l~~L~yl~avi~EtlRl 376 (516)
T PLN02183 299 KLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGL--NRRVEESDLEKLTYLKCTLKETLRL 376 (516)
T ss_pred CCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC--CCCCCHHHhccChHHHHHHHHHhcc
Confidence 389999999988876 89999999885 4568999999999999999999999
Q ss_pred CCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCC--CCCCCcccCCCCCcCChh
Q psy9539 83 YPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK--YPKYNYQPFAAGNRKCIA 160 (222)
Q Consensus 83 ~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~--~~~~~~~~Fg~G~r~C~G 160 (222)
+|+++...|.+.+|++++|+.||+||.|.++.+.+|+|+++|+||++|+||||++++... .+.+.|+|||.|+|+|+|
T Consensus 377 ~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG 456 (516)
T PLN02183 377 HPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPG 456 (516)
T ss_pred CCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCC
Confidence 999999889999999999999999999999999999999999999999999999754322 245689999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcc--cceeEEEEeCCCeeeecccC
Q psy9539 161 YKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLK--YEMRVTLTFYNGIYVPPPSQ 214 (222)
Q Consensus 161 ~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~v~~~~r 214 (222)
++||++|+++++|.|+++|++++.++... .... ...+.+..+..++.+.+++|
T Consensus 457 ~~lA~~e~~l~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r 511 (516)
T PLN02183 457 MQLGLYALDLAVAHLLHCFTWELPDGMKP-SELDMNDVFGLTAPRATRLVAVPTYR 511 (516)
T ss_pred hHHHHHHHHHHHHHHHheeEEEcCCCCCC-CCCChhhccccccccCCCcEEEeecC
Confidence 99999999999999999999998776421 0122 12234433455777777777
No 17
>KOG0159|consensus
Probab=100.00 E-value=3.9e-39 Score=279.48 Aligned_cols=183 Identities=23% Similarity=0.470 Sum_probs=169.2
Q ss_pred CCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcc
Q psy9539 29 DGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLR 81 (222)
Q Consensus 29 ~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR 81 (222)
+.++.+++...++.++ +++|+.+++... +..++.+.+.++|||.|||+||+|
T Consensus 310 ~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~-~~~~~~~~l~~~pyLrAcIKEtlR 388 (519)
T KOG0159|consen 310 KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSG-NSELTQKALTNMPYLRACIKETLR 388 (519)
T ss_pred ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCc-ccccchHHHhhCHHHHHHHHhhhc
Confidence 3388999888888887 889999998863 567889999999999999999999
Q ss_pred cCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccCCCCCcCChhH
Q psy9539 82 MYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAY 161 (222)
Q Consensus 82 l~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~Fg~G~r~C~G~ 161 (222)
|||.++++.|...+|.+++||.||+||.|.++++.+.+||+.|++|++|+||||+++.....+++.++|||.|+|+|+|+
T Consensus 389 lyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GR 468 (519)
T KOG0159|consen 389 LYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGR 468 (519)
T ss_pred eeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCCCCCceecCCCCCccccchH
Confidence 99999999999999999999999999999999999999999999999999999999875566899999999999999999
Q ss_pred HHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCcc
Q psy9539 162 KYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQIN 216 (222)
Q Consensus 162 ~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~ 216 (222)
+||.+|+.+++|.|+++|+++..++. ++++...+++.|..++.++|++|+.
T Consensus 469 RiAElEl~llLarllr~f~V~~~~~~----pv~~~~~~il~P~~~l~f~f~~r~~ 519 (519)
T KOG0159|consen 469 RIAELELHLLLARLLRNFKVEFLHEE----PVEYVYRFILVPNRPLRFKFRPRNE 519 (519)
T ss_pred HHHHHHHHHHHHHHHHhcceeecCCC----CccceeEEEEcCCCCcceeeeeCCC
Confidence 99999999999999999999998763 5888999999999999999999863
No 18
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=6.5e-39 Score=285.86 Aligned_cols=186 Identities=27% Similarity=0.461 Sum_probs=157.4
Q ss_pred ccccccc--ccCC-CCHHH---HHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhh
Q psy9539 20 KITMIDL--QKDG-FSEEQ---LMQETITLI---------------------------IFEELHSIFGDDKERCPTYEEL 66 (222)
Q Consensus 20 ~~d~l~~--~~~g-~~~~e---i~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~ 66 (222)
..|+++. ...+ .++++ |++++++++ +++|+++++++ ...++++++
T Consensus 262 ~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~--~~~~~~~~l 339 (482)
T PTZ00404 262 PRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG--RNKVLLSDR 339 (482)
T ss_pred cccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC--CCCCCcccc
Confidence 4688887 2222 44443 788888776 89999999886 356788999
Q ss_pred cCCHHHHHHHHhhcccCCCCCc-ceeeeccCeee-CCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCC
Q psy9539 67 QNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYP 144 (222)
Q Consensus 67 ~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~ 144 (222)
.+|||++|||+|++|+||+++. ++|.+.+|+++ +|+.||+|+.|.++.+++|+||++||||++|+||||++.. .
T Consensus 340 ~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----~ 415 (482)
T PTZ00404 340 QSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----S 415 (482)
T ss_pred ccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC----C
Confidence 9999999999999999999986 68999999999 9999999999999999999999999999999999998643 4
Q ss_pred CCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccC
Q psy9539 145 KYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQ 214 (222)
Q Consensus 145 ~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r 214 (222)
...++|||.|+|+|+|++||++|++++++.|+++|++++.++... ......+.++.| .+++|++++|
T Consensus 416 ~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~-~~~~v~~~~R 482 (482)
T PTZ00404 416 NDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKI--DETEEYGLTLKP-NKFKVLLEKR 482 (482)
T ss_pred CCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCC--CcccccceeecC-CCceeeeecC
Confidence 568999999999999999999999999999999999998765431 222244566664 5899999887
No 19
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1e-38 Score=285.78 Aligned_cols=182 Identities=26% Similarity=0.482 Sum_probs=157.7
Q ss_pred CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccC
Q psy9539 31 FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMY 83 (222)
Q Consensus 31 ~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 83 (222)
+++++|+++++.++ +++|+++++++ ...++++++.++||++|||+|++|++
T Consensus 284 ~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~--~~~~~~~~l~~l~yl~avi~E~lRl~ 361 (499)
T PLN03234 284 FTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD--KGYVSEEDIPNLPYLKAVIKESLRLE 361 (499)
T ss_pred CCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHhcChHHHHHHHHHhccC
Confidence 89999999999887 89999999875 46689999999999999999999999
Q ss_pred CCCCcc-eeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCC-CCCCCcCCCCCCCCCCC---CCCCCCcccCCCCCcCC
Q psy9539 84 PPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFG---KYPKYNYQPFAAGNRKC 158 (222)
Q Consensus 84 ~~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~---~~~~~~~~~Fg~G~r~C 158 (222)
|+++.. .|.+.+|++++|+.||+||.|.++.+.+|+||++| +||++|+||||+++... ......++|||.|+|+|
T Consensus 362 p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C 441 (499)
T PLN03234 362 PVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMC 441 (499)
T ss_pred CCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCC
Confidence 999974 79999999999999999999999999999999999 89999999999975432 12456899999999999
Q ss_pred hhHHHHHHHHHHHHHHHhHhCEeeeCCCCC-CccCcccceeEEEEeCCCeeeecccC
Q psy9539 159 IAYKYAMLQMKIVISTVLRHFKILPSPRYK-TIDDLKYEMRVTLTFYNGIYVPPPSQ 214 (222)
Q Consensus 159 ~G~~la~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~r 214 (222)
+|+++|++|+++++|.|+++|+|++.++.. .........+++..|.+.+.+.+++|
T Consensus 442 ~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 442 PAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred CChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 999999999999999999999999887531 11133445666667888888877766
No 20
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=1.1e-38 Score=283.22 Aligned_cols=186 Identities=19% Similarity=0.330 Sum_probs=158.1
Q ss_pred ccccccc----ccC--CCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCC-CCCCCChhh
Q psy9539 20 KITMIDL----QKD--GFSEEQLMQETITLI---------------------------IFEELHSIFGDD-KERCPTYEE 65 (222)
Q Consensus 20 ~~d~l~~----~~~--g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~-~~~~~~~~~ 65 (222)
..|+++. ... +++++||.+++++++ +++|++++++.. ....+++++
T Consensus 243 ~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~ 322 (463)
T PLN02774 243 HTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWND 322 (463)
T ss_pred cccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHH
Confidence 4688876 111 389999999999887 889999987631 134578999
Q ss_pred hcCCHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCC
Q psy9539 66 LQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPK 145 (222)
Q Consensus 66 ~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~ 145 (222)
+.++||++|||+|++|++|+++.+.|.+.+|++++|+.||+|+.|.++.+.+|+||++|+||++|+||||+++... ..
T Consensus 323 l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~--~~ 400 (463)
T PLN02774 323 YKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE--SH 400 (463)
T ss_pred HhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC--CC
Confidence 9999999999999999999998888999999999999999999999999999999999999999999999965421 12
Q ss_pred CCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeeccc
Q psy9539 146 YNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPS 213 (222)
Q Consensus 146 ~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~ 213 (222)
..++|||.|+|.|+|++||++|++++++.|+++|++++.++.. .. ...++.|.+|++|++++
T Consensus 401 ~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~----~~--~~~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 401 NYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK----LM--KFPRVEAPNGLHIRVSP 462 (463)
T ss_pred ccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc----cc--cCCCCCCCCCceEEeee
Confidence 3699999999999999999999999999999999999976643 11 11245588999999874
No 21
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.2e-38 Score=284.32 Aligned_cols=191 Identities=21% Similarity=0.383 Sum_probs=163.5
Q ss_pred cccccccc-----ccCC--CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCC--CCCCC
Q psy9539 19 RKITMIDL-----QKDG--FSEEQLMQETITLI---------------------------IFEELHSIFGDDK--ERCPT 62 (222)
Q Consensus 19 ~~~d~l~~-----~~~g--~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~--~~~~~ 62 (222)
...|+++. .++| +++++|+++++.++ +++|++++++... ...++
T Consensus 264 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~ 343 (490)
T PLN02302 264 RKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLT 343 (490)
T ss_pred CcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 34688877 2233 89999999998876 8899999876421 12378
Q ss_pred hhhhcCCHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCC
Q psy9539 63 YEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK 142 (222)
Q Consensus 63 ~~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~ 142 (222)
++++.++||++|+|+|++|++|+++...|.+.+|++++|+.||+|+.|.++.+.+|+|+++|+||++|+|+||++...
T Consensus 344 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~-- 421 (490)
T PLN02302 344 LKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP-- 421 (490)
T ss_pred HHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC--
Confidence 999999999999999999999999888899999999999999999999999999999999999999999999996532
Q ss_pred CCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCccc
Q psy9539 143 YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQINE 217 (222)
Q Consensus 143 ~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~ 217 (222)
.+..++|||.|+|.|+|++||.+|++++++.|+++|++++.++.. .+ ....++.|.+++++++++|.++
T Consensus 422 -~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~--~~~~~~~p~~~~~~~~~~~~~~ 490 (490)
T PLN02302 422 -KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC---KV--MYLPHPRPKDNCLARITKVASE 490 (490)
T ss_pred -CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC---cc--eeCCCCCCCCCceEEEEeccCC
Confidence 456899999999999999999999999999999999999986532 22 2333488999999999998764
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=1.5e-38 Score=281.64 Aligned_cols=186 Identities=20% Similarity=0.349 Sum_probs=160.3
Q ss_pred ccccccc--cc--CCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCC--CCCCCChhhh
Q psy9539 20 KITMIDL--QK--DGFSEEQLMQETITLI---------------------------IFEELHSIFGDD--KERCPTYEEL 66 (222)
Q Consensus 20 ~~d~l~~--~~--~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~--~~~~~~~~~~ 66 (222)
..|+++. .. ..+++++|++++++++ +++|+.++++.. ....++.+++
T Consensus 232 ~~d~l~~ll~~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~ 311 (452)
T PLN03141 232 PKDVVDVLLRDGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDY 311 (452)
T ss_pred hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence 3588877 22 2399999999999877 788888776421 1345788999
Q ss_pred cCCHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCC
Q psy9539 67 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKY 146 (222)
Q Consensus 67 ~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~ 146 (222)
.++||++|||+|++|++|+++.+.|.+.+|++++||.||+|+.|.++.+.+|+|+++|+||++|+||||+++.. .+.
T Consensus 312 ~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~---~~~ 388 (452)
T PLN03141 312 MSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM---NNS 388 (452)
T ss_pred hccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC---CCC
Confidence 99999999999999999998888899999999999999999999999999999999999999999999997532 356
Q ss_pred CcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 147 NYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 147 ~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
.|+|||.|+|.|+|++||++|+++++|.|+++|++++.++.. . ...++.|.+++.|.+++|.
T Consensus 389 ~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~ 450 (452)
T PLN03141 389 SFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI----V---NFPTVRMKRKLPIWVTRID 450 (452)
T ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe----e---ecccccCCCCceEEEEeCC
Confidence 899999999999999999999999999999999999865532 1 2247889999999999984
No 23
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=4.2e-38 Score=283.76 Aligned_cols=193 Identities=18% Similarity=0.409 Sum_probs=161.6
Q ss_pred ccccccc-----ccCC---CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChh
Q psy9539 20 KITMIDL-----QKDG---FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYE 64 (222)
Q Consensus 20 ~~d~l~~-----~~~g---~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~ 64 (222)
..|+++. ..+| +++++|++++++++ +++||+++++. ...++.+
T Consensus 291 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~ 368 (534)
T PLN03018 291 VEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGK--DRLVQES 368 (534)
T ss_pred cccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC--CCCCCHH
Confidence 3577776 1222 89999999999887 89999999875 4668899
Q ss_pred hhcCCHHHHHHHHhhcccCCCCCcc-eeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCC-
Q psy9539 65 ELQNMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK- 142 (222)
Q Consensus 65 ~~~~l~~l~a~i~E~lRl~~~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~- 142 (222)
++.++||++|||+|++|++|+++.. .|.+.+|++++||.||+|+.|.++.+++|+||++|+||++|+|+||++++...
T Consensus 369 ~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~ 448 (534)
T PLN03018 369 DIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITK 448 (534)
T ss_pred HhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccc
Confidence 9999999999999999999999875 68899999999999999999999999999999999999999999999654211
Q ss_pred -----CCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCcc
Q psy9539 143 -----YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQIN 216 (222)
Q Consensus 143 -----~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~ 216 (222)
.....++|||.|+|.|+|++||++|++++++.|+++|++++.++.... ......+.+.. .++++|++++|..
T Consensus 449 ~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~~~~-p~~~~v~~~~R~~ 525 (534)
T PLN03018 449 EVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPL-SLEEDDASLLM-AKPLLLSVEPRLA 525 (534)
T ss_pred cccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCC-Cccccccceec-CCCeEEEEEeccc
Confidence 245689999999999999999999999999999999999987653211 12212243444 4699999999953
No 24
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=3.8e-38 Score=283.30 Aligned_cols=182 Identities=27% Similarity=0.495 Sum_probs=157.6
Q ss_pred CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccC
Q psy9539 31 FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMY 83 (222)
Q Consensus 31 ~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 83 (222)
+++++|.+++++++ +++|++++++. ...++.+++.++||++|||+|++|++
T Consensus 293 l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~EtlRl~ 370 (517)
T PLN02687 293 ITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR--DRLVSESDLPQLTYLQAVIKETFRLH 370 (517)
T ss_pred CCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC--CCCCCHHHhhhCHHHHHHHHHHHccC
Confidence 99999999998887 88999999875 46789999999999999999999999
Q ss_pred CCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCC-----CCCCCCcccCCCCCcC
Q psy9539 84 PPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG-----KYPKYNYQPFAAGNRK 157 (222)
Q Consensus 84 ~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~-----~~~~~~~~~Fg~G~r~ 157 (222)
|+++. ++|.+.+|++++|+.||+|+.|.++.+.+|+||++|+||++|+||||+++... ......++|||.|+|.
T Consensus 371 p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~ 450 (517)
T PLN02687 371 PSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRI 450 (517)
T ss_pred CCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCC
Confidence 99986 78999999999999999999999999999999999999999999999975321 1235579999999999
Q ss_pred ChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCc--ccceeEEEEeCCCeeeecccCc
Q psy9539 158 CIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDL--KYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 158 C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
|+|++||++|+++++|.|+++|++++.++... +.+ ....+..+.+..++++++++|.
T Consensus 451 C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 451 CAGLSWGLRMVTLLTATLVHAFDWELADGQTP-DKLNMEEAYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred CCChHHHHHHHHHHHHHHHHhcceecCCCCCc-ccCCcccccceeeecCCCeEEeeccCC
Confidence 99999999999999999999999998765321 122 2234555567778999999995
No 25
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=5.1e-38 Score=279.48 Aligned_cols=190 Identities=23% Similarity=0.371 Sum_probs=163.8
Q ss_pred ccccccc---ccCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCC-CCCCCChhhhcC
Q psy9539 20 KITMIDL---QKDGFSEEQLMQETITLI---------------------------IFEELHSIFGDD-KERCPTYEELQN 68 (222)
Q Consensus 20 ~~d~l~~---~~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~-~~~~~~~~~~~~ 68 (222)
..|+++. ...+++++||++++++++ +++|++++.+.. ....++++++.+
T Consensus 249 ~~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~ 328 (472)
T PLN02987 249 KKDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKS 328 (472)
T ss_pred cccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhc
Confidence 4688887 234699999999998876 888988887531 134578899999
Q ss_pred CHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCc
Q psy9539 69 MPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY 148 (222)
Q Consensus 69 l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~ 148 (222)
+||++|+++|++|++|+++...|.+.+|++++||.||+|+.|.++.+.+|+||++|++|++|+|+||+++.........+
T Consensus 329 lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~ 408 (472)
T PLN02987 329 MPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVF 408 (472)
T ss_pred ChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcce
Confidence 99999999999999999988889999999999999999999999999999999999999999999999754333345689
Q ss_pred ccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCc
Q psy9539 149 QPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215 (222)
Q Consensus 149 ~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~ 215 (222)
+|||.|+|.|+|++||.+|++++++.|+++|++++..+.. .+ ...++.|.+++++++++|.
T Consensus 409 l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~----~~--~~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 409 TPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK----LV--FFPTTRTQKRYPINVKRRD 469 (472)
T ss_pred ECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc----ee--ecccccCCCCceEEEEecc
Confidence 9999999999999999999999999999999999875532 32 2458899999999999983
No 26
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=281.60 Aligned_cols=196 Identities=20% Similarity=0.405 Sum_probs=165.1
Q ss_pred ccccccc--c---cC---CCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChh
Q psy9539 20 KITMIDL--Q---KD---GFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYE 64 (222)
Q Consensus 20 ~~d~l~~--~---~~---g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~ 64 (222)
..|+++. . .+ .+++++|++++++++ +++|++++++. .+.++++
T Consensus 273 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~--~~~~t~~ 350 (514)
T PLN03112 273 DMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR--NRMVQES 350 (514)
T ss_pred cchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC--CCcCChh
Confidence 4688877 1 22 289999999999888 89999999886 4668999
Q ss_pred hhcCCHHHHHHHHhhcccCCCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCC--
Q psy9539 65 ELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG-- 141 (222)
Q Consensus 65 ~~~~l~~l~a~i~E~lRl~~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~-- 141 (222)
++.++||++|||+|++|++|+++. +.|.+.+|++++|+.||+|+.|.++.+.+|+||++|+||++|+|+||..+...
T Consensus 351 ~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~ 430 (514)
T PLN03112 351 DLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRV 430 (514)
T ss_pred hhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCcc
Confidence 999999999999999999999986 68999999999999999999999999999999999999999999998653211
Q ss_pred -C--CCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCC--CccCcccceeEEEEeCCCeeeecccCcc
Q psy9539 142 -K--YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK--TIDDLKYEMRVTLTFYNGIYVPPPSQIN 216 (222)
Q Consensus 142 -~--~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~v~~~~r~~ 216 (222)
. ...+.++|||.|+|.|+|++||++|++++++.|+++|+|++..+.. ++ ......++++.+.+++++++.+|..
T Consensus 431 ~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ 509 (514)
T PLN03112 431 EISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDI-DTQEVYGMTMPKAKPLRAVATPRLA 509 (514)
T ss_pred ccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccC-CCccccCcccccCCCeEEEeecCCc
Confidence 1 1356899999999999999999999999999999999999876532 11 2223345666678899999999976
Q ss_pred ch
Q psy9539 217 EE 218 (222)
Q Consensus 217 ~~ 218 (222)
+.
T Consensus 510 ~~ 511 (514)
T PLN03112 510 PH 511 (514)
T ss_pred cc
Confidence 53
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=7.7e-38 Score=277.84 Aligned_cols=186 Identities=21% Similarity=0.404 Sum_probs=161.4
Q ss_pred ccccccc---ccCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCC-CCCCCChhhhcC
Q psy9539 20 KITMIDL---QKDGFSEEQLMQETITLI---------------------------IFEELHSIFGDD-KERCPTYEELQN 68 (222)
Q Consensus 20 ~~d~l~~---~~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~-~~~~~~~~~~~~ 68 (222)
..|+++. ...++++++|.+++++++ +++|++++++.. ....++++++.+
T Consensus 246 ~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~ 325 (463)
T PLN02196 246 HNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKK 325 (463)
T ss_pred cccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhc
Confidence 4678877 234599999999999887 788999887642 134588999999
Q ss_pred CHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCc
Q psy9539 69 MPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY 148 (222)
Q Consensus 69 l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~ 148 (222)
+||++|+|+|++|++|+++...|.+.+|++++||.||+|+.|.++.+.+|+|+++|+||++|+||||++.. .+..+
T Consensus 326 l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~----~~~~~ 401 (463)
T PLN02196 326 MPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP----KPNTF 401 (463)
T ss_pred ChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC----CCCcc
Confidence 99999999999999999988889999999999999999999999999999999999999999999999632 45689
Q ss_pred ccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccC
Q psy9539 149 QPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQ 214 (222)
Q Consensus 149 ~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r 214 (222)
+|||.|+|.|+|++||++|++++++.|+++|+|++.+++. .. ....+..|+++++|+++++
T Consensus 402 lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~--~~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 402 MPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN---GI--QYGPFALPQNGLPIALSRK 462 (463)
T ss_pred cCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC---ce--EEcccccCCCCceEEEecC
Confidence 9999999999999999999999999999999999876533 23 4455667999999998754
No 28
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=1.6e-37 Score=277.54 Aligned_cols=191 Identities=26% Similarity=0.553 Sum_probs=161.6
Q ss_pred ccccccc---ccCCCCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCC
Q psy9539 20 KITMIDL---QKDGFSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNM 69 (222)
Q Consensus 20 ~~d~l~~---~~~g~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l 69 (222)
..|+++. ..+++++++|.+++++++ +++|++++++. ..++++++.+|
T Consensus 260 ~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~---~~~~~~~~~~l 336 (489)
T PLN02936 260 DPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG---RPPTYEDIKEL 336 (489)
T ss_pred chHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC---CCCCHHHHhhC
Confidence 4577776 223599999999999888 89999999874 45789999999
Q ss_pred HHHHHHHHhhcccCCCCCcce-eeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCC---CCCC
Q psy9539 70 PVLDRCIKEVLRMYPPGYIIA-RRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG---KYPK 145 (222)
Q Consensus 70 ~~l~a~i~E~lRl~~~~~~~~-r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~---~~~~ 145 (222)
|||+|||+|++|++|+++... |.+..|+.++|+.||+|+.|.++.+.+|+||++|+||++|+|+||+.++.. ....
T Consensus 337 pyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~ 416 (489)
T PLN02936 337 KYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTD 416 (489)
T ss_pred HHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCC
Confidence 999999999999999988754 555677777999999999999999999999999999999999999964421 1134
Q ss_pred CCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccCccc
Q psy9539 146 YNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQINE 217 (222)
Q Consensus 146 ~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~ 217 (222)
..++|||.|+|.|+|++||++|++++++.|+++|+++++++.. .....+++..|.++++|++++|..+
T Consensus 417 ~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~R~~~ 484 (489)
T PLN02936 417 FRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD----IVMTTGATIHTTNGLYMTVSRRRVP 484 (489)
T ss_pred cceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc----cceecceEEeeCCCeEEEEEeeeCC
Confidence 5899999999999999999999999999999999999986543 2333457778999999999998654
No 29
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.6e-36 Score=271.92 Aligned_cols=157 Identities=25% Similarity=0.495 Sum_probs=141.4
Q ss_pred CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHhhcccC
Q psy9539 31 FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMY 83 (222)
Q Consensus 31 ~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~ 83 (222)
+++++|.+++++++ +++|++++++......++.+++.++||++|||+|++|++
T Consensus 285 l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~ 364 (502)
T PLN02966 285 FTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIE 364 (502)
T ss_pred CCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccC
Confidence 99999999988887 889999998742123578999999999999999999999
Q ss_pred CCCCc-ceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCC-CCCCCcCCCCCCCCCCC-CCCCCCcccCCCCCcCChh
Q psy9539 84 PPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFG-KYPKYNYQPFAAGNRKCIA 160 (222)
Q Consensus 84 ~~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~-~~~~~~~~~Fg~G~r~C~G 160 (222)
|+++. +.|.+.+|++++|+.||+||.|.++.+.+||||++| |||++|+||||+++... ......|+|||.|+|+|+|
T Consensus 365 p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G 444 (502)
T PLN02966 365 PVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPG 444 (502)
T ss_pred CCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCC
Confidence 99997 589999999999999999999999999999999999 99999999999975432 1246689999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhCEeeeCCCC
Q psy9539 161 YKYAMLQMKIVISTVLRHFKILPSPRY 187 (222)
Q Consensus 161 ~~la~~e~~~~la~ll~~f~~~~~~~~ 187 (222)
++||++|+++++|.|+++|+|++.++.
T Consensus 445 ~~~A~~el~~~la~ll~~f~i~~~~~~ 471 (502)
T PLN02966 445 MRLGAAMLEVPYANLLLNFNFKLPNGM 471 (502)
T ss_pred HHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence 999999999999999999999987764
No 30
>KOG0684|consensus
Probab=100.00 E-value=3.4e-36 Score=256.29 Aligned_cols=195 Identities=30% Similarity=0.595 Sum_probs=169.1
Q ss_pred Cccccccccc--c--cCC--CCHHHHHHHHHHHH---------------------------HHHHHHHHhCCCCCCCCCh
Q psy9539 17 PNRKITMIDL--Q--KDG--FSEEQLMQETITLI---------------------------IFEELHSIFGDDKERCPTY 63 (222)
Q Consensus 17 ~~~~~d~l~~--~--~~g--~~~~ei~~~~~~~~---------------------------~~~Ei~~~~~~~~~~~~~~ 63 (222)
+....|+++. + ..| +++.|++...+.++ +++|+.+++|++ ...+++
T Consensus 249 s~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~-~~~l~~ 327 (486)
T KOG0684|consen 249 SKWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEK-KEKLTY 327 (486)
T ss_pred ccccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc-CCCCCH
Confidence 3355677777 2 345 99999999988776 899999999874 444999
Q ss_pred hhhcCCHHHHHHHHhhcccCCCCCcceeeeccCeeeCC----EeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCC
Q psy9539 64 EELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGD----YDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEK 139 (222)
Q Consensus 64 ~~~~~l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~ 139 (222)
+.++.+|.|+.||+|||||+||.+.+.|.+.+|.++.+ |.||+|..|.+++..+|+||++||+|+.|+|+||++++
T Consensus 328 d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~ 407 (486)
T KOG0684|consen 328 DQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDN 407 (486)
T ss_pred HHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCC
Confidence 99999999999999999999999999999999999976 99999999999999999999999999999999999876
Q ss_pred CCC-----CCCCCcccCCCCCcCChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccC
Q psy9539 140 FGK-----YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQ 214 (222)
Q Consensus 140 ~~~-----~~~~~~~~Fg~G~r~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r 214 (222)
++. .-.+.+||||+|.+.|||+.||++|++.++..+|++||+++.+++. +++.+ ...+..|.+++.++.+.|
T Consensus 408 ~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~--P~~d~-s~~v~~P~g~v~irYK~R 484 (486)
T KOG0684|consen 408 GESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF--PEVDY-SRMVMQPEGDVRIRYKRR 484 (486)
T ss_pred cccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCC--CCCCH-HHhhcCCCCCceEEEeec
Confidence 544 1345579999999999999999999999999999999999998733 34553 334889999999999988
Q ss_pred c
Q psy9539 215 I 215 (222)
Q Consensus 215 ~ 215 (222)
.
T Consensus 485 ~ 485 (486)
T KOG0684|consen 485 P 485 (486)
T ss_pred C
Confidence 5
No 31
>PLN02648 allene oxide synthase
Probab=99.97 E-value=4e-31 Score=235.15 Aligned_cols=158 Identities=25% Similarity=0.488 Sum_probs=135.4
Q ss_pred cCCCCHHHHHHHHHHHH-----------------------------HHHHHHHHhCCCCCCCCChhhhcCCHHHHHHHHh
Q psy9539 28 KDGFSEEQLMQETITLI-----------------------------IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKE 78 (222)
Q Consensus 28 ~~g~~~~ei~~~~~~~~-----------------------------~~~Ei~~~~~~~~~~~~~~~~~~~l~~l~a~i~E 78 (222)
..|++++||+++++.++ +++|++++++.. ...++.+++.++||+++||+|
T Consensus 264 ~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~-~~~~t~~~l~~l~yl~avi~E 342 (480)
T PLN02648 264 KFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAG-GGGVTFAALEKMPLVKSVVYE 342 (480)
T ss_pred hcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccC-CCCCCHHHHhcCHHHHHHHHH
Confidence 46799999999987532 888999988631 356899999999999999999
Q ss_pred hcccCCCCCcceeeeccCeeeC----CEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccC---
Q psy9539 79 VLRMYPPGYIIARRIRREIKIG----DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPF--- 151 (222)
Q Consensus 79 ~lRl~~~~~~~~r~~~~~~~i~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~F--- 151 (222)
++|++|+++...|.+.+|++++ ||.||+|+.|.++.+.+|+||++|+||++|+|+||+++.... ...+++|
T Consensus 343 tLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~--~~~~~~f~~g 420 (480)
T PLN02648 343 ALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK--LLKYVFWSNG 420 (480)
T ss_pred HHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc--cccccccCCC
Confidence 9999999999889899999996 799999999999999999999999999999999998643221 1233444
Q ss_pred ------CCCCcCChhHHHHHHHHHHHHHHHhHhCE-eeeCCCCC
Q psy9539 152 ------AAGNRKCIAYKYAMLQMKIVISTVLRHFK-ILPSPRYK 188 (222)
Q Consensus 152 ------g~G~r~C~G~~la~~e~~~~la~ll~~f~-~~~~~~~~ 188 (222)
|.|+|.|+|++||++|++++++.|+++|+ +++.++..
T Consensus 421 ~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~ 464 (480)
T PLN02648 421 RETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTS 464 (480)
T ss_pred cccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence 67789999999999999999999999998 99876644
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=2.1e-31 Score=233.30 Aligned_cols=180 Identities=28% Similarity=0.536 Sum_probs=139.9
Q ss_pred Cccccccccc-----ccCC--CCHHHHHHHHHHHH----------HHHHHHHHhCCCCCCCCChhh-hcC--CHHHHHHH
Q psy9539 17 PNRKITMIDL-----QKDG--FSEEQLMQETITLI----------IFEELHSIFGDDKERCPTYEE-LQN--MPVLDRCI 76 (222)
Q Consensus 17 ~~~~~d~l~~-----~~~g--~~~~ei~~~~~~~~----------~~~Ei~~~~~~~~~~~~~~~~-~~~--l~~l~a~i 76 (222)
.....|++++ ...+ ||++||++++++++ +..-+..... +... .+. ..+ .+|+.+++
T Consensus 211 ~~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~---~P~~-~~~l~~e~~~~~~~~~v 286 (411)
T COG2124 211 AAPRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLR---HPDQ-LAKLRAEPDRPLLEAVV 286 (411)
T ss_pred cCCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH---CchH-HHHHHhCcchHHHHHHH
Confidence 3456788877 2222 99999999999998 1111111111 0110 010 111 17999999
Q ss_pred HhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccCCCCCc
Q psy9539 77 KEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNR 156 (222)
Q Consensus 77 ~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~Fg~G~r 156 (222)
+|+||++|+++...|.+.+|++++|+.||+|+.|.++.+.+||||++|++|++|+|+||. ..++|||+|+|
T Consensus 287 ~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~---------~~~l~FG~G~H 357 (411)
T COG2124 287 EETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN---------NAHLPFGGGPH 357 (411)
T ss_pred HHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC---------CCCcCCCCCCc
Confidence 999999999999889999999999999999999999999999999999999999999985 57899999999
Q ss_pred CChhHHHHHHHHHHHHHHHhHhCEeeeCCCCCCccCcccceeEEEEeCCCeeeecccC
Q psy9539 157 KCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQ 214 (222)
Q Consensus 157 ~C~G~~la~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r 214 (222)
.|+|.+||++|++++++.++++|++....++. .. ....+..+..+..+.++.+
T Consensus 358 ~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~~---~~--~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 358 RCLGAALARLELKVALAELLRRFPLLLLAEPP---PL--VRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred cccCHHHHHHHHHHHHHHHHHhCchhhcCCCC---Cc--cccccccCCCcceeeeecC
Confidence 99999999999999999999999988766511 12 3445666776777776654
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=55.38 E-value=7.3 Score=24.48 Aligned_cols=7 Identities=57% Similarity=1.540 Sum_probs=5.3
Q ss_pred CCCCCCC
Q psy9539 131 NPDRFLP 137 (222)
Q Consensus 131 ~p~R~~~ 137 (222)
||||||.
T Consensus 44 DPERWLP 50 (59)
T PF08492_consen 44 DPERWLP 50 (59)
T ss_pred CccccCc
Confidence 6788874
No 34
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=45.25 E-value=18 Score=26.89 Aligned_cols=23 Identities=22% Similarity=0.482 Sum_probs=16.8
Q ss_pred cCChhHHHHHHHHHHHHHHHhHh
Q psy9539 156 RKCIAYKYAMLQMKIVISTVLRH 178 (222)
Q Consensus 156 r~C~G~~la~~e~~~~la~ll~~ 178 (222)
-+|.|+.||..++-.++..|+..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 47999999999999999999863
No 35
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=34.96 E-value=42 Score=26.64 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=28.9
Q ss_pred CHHHHHHHHhhcccCCCCCcceeeeccCeeeCCEeeCCCcEEEe
Q psy9539 69 MPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMN 112 (222)
Q Consensus 69 l~~l~a~i~E~lRl~~~~~~~~r~~~~~~~i~g~~ip~g~~v~~ 112 (222)
-....|||+|+.-+..- ..+.=+..+|+.++|..||+|+.+.-
T Consensus 52 ~n~I~A~V~~~qtv~~G-s~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDG-SRVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCC-CEEEEEEcCceEECCEEeCCCCEEEE
Confidence 44567888888755321 12222456889999999999986653
No 36
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=32.25 E-value=88 Score=26.88 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=18.0
Q ss_pred CCCCcccCCCCCcCChhHHHHHHHHHHHH
Q psy9539 144 PKYNYQPFAAGNRKCIAYKYAMLQMKIVI 172 (222)
Q Consensus 144 ~~~~~~~Fg~G~r~C~G~~la~~e~~~~l 172 (222)
++++++-||.+ +..|+++|+ |++.++
T Consensus 326 spYs~l~~~~p--ms~GrRIA~-EIk~A~ 351 (361)
T COG1759 326 SPYSNLYWGEP--MSTGRRIAR-EIKEAI 351 (361)
T ss_pred CcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence 34555666554 688999997 777665
No 37
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=26.19 E-value=34 Score=30.33 Aligned_cols=18 Identities=33% Similarity=0.584 Sum_probs=13.9
Q ss_pred cCeeeCCEeeCCCcEEEe
Q psy9539 95 REIKIGDYDIPKDATIMN 112 (222)
Q Consensus 95 ~~~~i~g~~ip~g~~v~~ 112 (222)
.|+.++|..||+||.++-
T Consensus 280 e~~~v~~~~ipkgt~l~g 297 (410)
T TIGR03779 280 EPIQAGDLVIPKGTVLYG 297 (410)
T ss_pred CceeeCCEEecCCCEEEE
Confidence 466778899999986653
No 38
>KOG3506|consensus
Probab=25.13 E-value=34 Score=21.07 Aligned_cols=11 Identities=36% Similarity=0.896 Sum_probs=9.2
Q ss_pred ccCCCCCcCCh
Q psy9539 149 QPFAAGNRKCI 159 (222)
Q Consensus 149 ~~Fg~G~r~C~ 159 (222)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36999999985
No 39
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=24.45 E-value=51 Score=22.30 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhHhCEeeeCCC
Q psy9539 166 LQMKIVISTVLRHFKILPSPR 186 (222)
Q Consensus 166 ~e~~~~la~ll~~f~~~~~~~ 186 (222)
.-++-++..+|+-|||.+++-
T Consensus 60 ~~IrdAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVPM 80 (84)
T ss_pred HHHHHHHHHHhccCCceeeec
Confidence 456778999999999999864
No 40
>PF07797 DUF1639: Protein of unknown function (DUF1639); InterPro: IPR012438 This approximately 50-residue region is found in a number of sequences derived from hypothetical plant proteins. This region features a highly basic 5 amino-acid stretch towards its centre.
Probab=21.43 E-value=1.6e+02 Score=17.75 Aligned_cols=25 Identities=16% Similarity=0.460 Sum_probs=18.3
Q ss_pred CCHHHHHHHHHHHH--------------HHHHHHHHhCC
Q psy9539 31 FSEEQLMQETITLI--------------IFEELHSIFGD 55 (222)
Q Consensus 31 ~~~~ei~~~~~~~~--------------~~~Ei~~~~~~ 55 (222)
||..||-..++.+. ++..++.++++
T Consensus 1 Lsr~EieeDf~am~G~kpprRPkKRpk~Vqk~ld~lfPG 39 (50)
T PF07797_consen 1 LSRKEIEEDFLAMTGSKPPRRPKKRPKNVQKQLDSLFPG 39 (50)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHhhcCcc
Confidence 56778888887777 67777777664
Done!