RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9539
(222 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 200 bits (511), Expect = 1e-62
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 23 MIDLQKDGFSEEQLMQETITLII---------------------------FEELHSIFGD 55
++ ++ +E L+ +T I E+ + G
Sbjct: 231 ILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGS 290
Query: 56 DKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIY 115
+ +E+L + L + +KE LR+YPP + R + E I +P + ++ Y
Sbjct: 291 KRY--LDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTY 348
Query: 116 AMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 175
M R +E+P FNPDRF P P++ Y PF+ G+R CI ++A +++K+V++ +
Sbjct: 349 VMGRMDTYFEDPLTFNPDRFGPGA--PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKL 406
Query: 176 LRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
L+ + P + + TL + +
Sbjct: 407 LQRLEFRLVPGQ----RFGLQEQATLKPLDPVLC 436
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 190 bits (486), Expect = 9e-59
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 34/200 (17%)
Query: 29 DGFSEEQLMQETITLII---------------------------FEELHSIFGDDKERCP 61
D E+++ + + ++ +E+ ++ G R
Sbjct: 257 DPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG---RPV 313
Query: 62 TYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDP 121
+E+++ + I E +R+ P +++ RR E ++G Y IP A I+ YA+ RDP
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 122 NVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKI 181
Y++ +F+PDR+LPE+ PKY +PF+AG RKC + ++M Q+ ++ + + ++
Sbjct: 374 KSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
Query: 182 LPSPRYKTIDDLKYEMRVTL 201
+ + +TL
Sbjct: 434 EQVAGS----NDAVRVGITL 449
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 189 bits (481), Expect = 5e-58
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 28 KDG--FSEEQLMQETITLI---------------------------IFEELHSIFGDDKE 58
KDG +++++ I L+ + E ++ G++
Sbjct: 243 KDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP 302
Query: 59 RCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMH 118
TY++L+++ +LDRCIKE LR+ PP I+ R R + Y IP +
Sbjct: 303 P-LTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQ 361
Query: 119 RDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRH 178
R + + FNPDR+L + K+ Y PF AG +CI +A +Q+K + ST+LR
Sbjct: 362 RLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRL 421
Query: 179 FKILPSPRY 187
++ Y
Sbjct: 422 YEFDLIDGY 430
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 187 bits (476), Expect = 6e-57
Identities = 46/239 (19%), Positives = 93/239 (38%), Gaps = 43/239 (17%)
Query: 5 QKQHEDSNNNGVPNRK---ITMIDLQKDG-FSEEQLMQETITLII--------------- 45
+K+ S + +I +K G + E + Q + ++I
Sbjct: 261 EKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLF 320
Query: 46 ------------FEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRI 93
+E+ ++ G+ R +++Q + V++ I E +R P ++ R+
Sbjct: 321 LIAKHPNVEEAIIKEIQTVIGE---RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKA 377
Query: 94 RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAA 153
+ I Y + K I+ I MHR + P++F + F P +QPF
Sbjct: 378 LEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENFAKNV----PYRYFQPFGF 432
Query: 154 GNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTL---TFYNGIYV 209
G R C AM+ MK ++ T+LR F + + ++ ++ ++L N + +
Sbjct: 433 GPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQG-QCVESIQKIHDLSLHPDETKNMLEM 490
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 182 bits (464), Expect = 1e-55
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPK 106
+EL ++GD + ++ L+ +P L+ +KE LR++PP I+ R + E ++ + I +
Sbjct: 284 DELDELYGDGRS--VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHE 341
Query: 107 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF-GKYPKYNYQPFAAGNRKCIAYKYAM 165
+ +R P + +P F P R+ + ++ + PF AG +C+ +A+
Sbjct: 342 GDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 166 LQMKIVISTVLRHFKI-LPSPRYKTIDD 192
+Q+K + S +LR ++ + P +D
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPESYRND 429
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 175 bits (446), Expect = 6e-53
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPK 106
+E+ + MP +RC +E +R PP ++ R++ ++K+G Y +PK
Sbjct: 294 KEIEEFPAQL----NYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPK 349
Query: 107 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 166
I H D + P +++P+R + + F AG KCI K+ +L
Sbjct: 350 GDIIACSPLLSHHDEEAFPEPRRWDPERDEK------VEGAFIGFGAGVHKCIGQKFGLL 403
Query: 167 QMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
Q+K +++T R + + D Y V + V
Sbjct: 404 QVKTILATAFRSYDFQLLRDE--VPDPDYHTMVVGPTASQCRV 444
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 171 bits (436), Expect = 2e-51
Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 38/202 (18%)
Query: 29 DGFSEEQLMQETITLII---------------------------FEELHSIFGDDKERCP 61
+ +E + + IT +I EE + D P
Sbjct: 247 EPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV---P 303
Query: 62 TYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRD 120
+Y++++ + + + E LR++P + + + + G+Y + K +M I +HRD
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 363
Query: 121 PNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
++ ++ ++F P+RF P++ ++PF G R CI ++A+ + +V+ +L+HF
Sbjct: 364 KTIWGDDVEEFRPERFENPS--AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 180 KILPSPRYKTIDDLKYEMRVTL 201
Y+ L + +TL
Sbjct: 422 DFEDHTNYE----LDIKETLTL 439
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 170 bits (434), Expect = 3e-51
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Query: 21 ITMIDLQKDGFSEEQLMQETITLII---------------------------FEELHSIF 53
+ D S +L + + L+ +E + +
Sbjct: 229 LAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQ 288
Query: 54 GDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNY 113
+ T E L+ MP LD+ ++EVLR+ PP R + ++ + + PK +
Sbjct: 289 LS---QELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQ 345
Query: 114 IYAMHRDPNVYENPDQFNPDRFLPEKF-GKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVI 172
I H DP++Y +P++F+P+RF P+ P + + PF G R+C+ ++A L+MK+
Sbjct: 346 ISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFA 405
Query: 173 STVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
+ +++ F P +L+ + + + + V
Sbjct: 406 TRLIQQFDWTLLPGQ----NLELVVTPSPRPKDNLRV 438
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 164 bits (418), Expect = 1e-48
Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDI 104
+ +E+ S+ D+ + P E+L+NMP L C+KE +R+ P R + + +G+Y +
Sbjct: 320 LLQEVQSVLPDN--QTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL 377
Query: 105 PKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYA 164
PK + + + +E+ +F P+R+L ++ P + + PF G R CI + A
Sbjct: 378 PKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINP-FAHLPFGIGKRMCIGRRLA 436
Query: 165 MLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
LQ+ + + +++ + I+ + + ++ L + +
Sbjct: 437 ELQLHLALCWIIQKYDIVATDN----EPVEMLHLGILVPSRELPI 477
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 163 bits (416), Expect = 3e-48
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPK 106
EE+ ++ + PTY+ + M LD + E LR++P + R +++++I IPK
Sbjct: 311 EEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPK 368
Query: 107 DATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAML 166
+M YA+HRDP + P++F P+RF + Y Y PF +G R CI ++A++
Sbjct: 369 GVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALM 428
Query: 167 QMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
MK+ + VL++F P +T LK + L + +
Sbjct: 429 NMKLALIRVLQNFSFKPCK--ETQIPLKLSLGGLLQPEKPVVL 469
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 162 bits (412), Expect = 6e-48
Identities = 32/176 (18%), Positives = 68/176 (38%), Gaps = 18/176 (10%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI----G 100
+ EE+ + T E ++ MP+ + E LR+ PP + + I
Sbjct: 303 LAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDA 362
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAG------ 154
+++ K + Y +DP V++ P+++ PDRF+ + G+ Y ++ G
Sbjct: 363 TFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD--GEAL-LKYVWWSNGPETESP 419
Query: 155 ---NRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGI 207
N++C + +L ++ + + R + L + +T I
Sbjct: 420 TVENKQCAGKDFVVLITRLFVIELFRRYDSFEIE--LGESPLGAAVTLTFLKRASI 473
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 162 bits (410), Expect = 2e-47
Identities = 29/175 (16%), Positives = 65/175 (37%), Gaps = 14/175 (8%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGD--- 101
+ EE+ S+ + T ++ M + + E LR PP R ++++ I
Sbjct: 321 LAEEIRSVIKSNGGE-LTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDA 379
Query: 102 -YDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPF-------AA 153
+ + + Y RDP +++ D+F P+RF+ E+ K ++
Sbjct: 380 AFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTV 439
Query: 154 GNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIY 208
GN++C + +L ++ + + R + L + + +
Sbjct: 440 GNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE--VGTSPLGSSVNFSSLRKASFH 492
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 161 bits (409), Expect = 3e-47
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDI 104
+ E+ + + LQ +P+L IKE LR++P + R + ++ + DY I
Sbjct: 312 LRAEVLAARHQAQG--DMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMI 369
Query: 105 PKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYA 164
P + IYA+ R+P + +P+ F+P R+L + + F G R+C+ + A
Sbjct: 370 PAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY-FRNLGFGWGVRQCLGRRIA 428
Query: 165 MLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
L+M I + +L +F++ D+ + L I
Sbjct: 429 ELEMTIFLINMLENFRVEIQHL----SDVGTTFNLILMPEKPISF 469
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 157 bits (399), Expect = 1e-46
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 23 MIDLQKDGFSEEQLMQETITLII-------------FEEL--HSIFGDDKERCPTYEELQ 67
++ E+ + E +TL++ F L D ++R E +
Sbjct: 198 IVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRP---DWQKRV--AESEE 252
Query: 68 NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENP 127
L +E LR+YPP +I+ RR+ R + +G+ +P T++ Y R + +
Sbjct: 253 A--ALA-AFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPDG 307
Query: 128 DQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY 187
+ F P+RFL E+ P Y PF G R C+ +A+L+ IV+ R F++ P P
Sbjct: 308 EAFRPERFLEER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFP 365
Query: 188 KTIDDL----KYEMRVTLT 202
+ + + + +
Sbjct: 366 RVLAQVTLRPEGGLPARPR 384
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 155 bits (393), Expect = 6e-45
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 47 EELHSIFGDD--------KERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIK 98
EE+ + C + EL ++PVLD IKE LR+ I R + +
Sbjct: 296 EEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFT 354
Query: 99 I----GDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPE---------KFGKYPK 145
+ G Y+I KD I Y MH DP +Y +P F DR+L E G K
Sbjct: 355 LHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLK 414
Query: 146 YNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKI-LPSPRYKTIDDLKYEMRVTLT 202
Y Y PF +G C +A+ ++K + +L +F++ L + K L
Sbjct: 415 YYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAK-CPPLDQSRAGLGI 471
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 148 bits (376), Expect = 2e-42
Identities = 43/227 (18%), Positives = 82/227 (36%), Gaps = 48/227 (21%)
Query: 23 MIDLQKDGFSEEQLMQETITLI---------------------------IFEELHSIFGD 55
++ L++ G SEE + + + + EL SI
Sbjct: 250 LLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQ 309
Query: 56 DKERCP-----TYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-----GDYDIP 105
++ + L + PVLD + E LR+ I R + ++ + ++++
Sbjct: 310 AEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAAP-FITREVVVDLAMPMADGREFNLR 368
Query: 106 KDATIMNY-IYAMHRDPNVYENPDQFNPDRFLPE---------KFGKYPKYNYQPFAAGN 155
+ ++ + + RDP +Y +P+ F +RFL K GK K P+ AG+
Sbjct: 369 RGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGH 428
Query: 156 RKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLT 202
C+ YA+ +K + VL H + I +
Sbjct: 429 NHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGL 475
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 144 bits (364), Expect = 3e-41
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 8/128 (6%)
Query: 64 EELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNV 123
+Q + ++EV R YP + R ++ + P+ ++ +Y + D
Sbjct: 266 ALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAAT 325
Query: 124 YENPDQFNPDRFLPEKFGKYPKYNYQPFAAG----NRKCIAYKYAMLQMKIVISTVLRHF 179
+ +P +F P+RF +N+ P G +C + MK+ ++
Sbjct: 326 WADPQEFRPERFRAWDE---DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 180 KI-LPSPR 186
+ +P
Sbjct: 383 RYDVPDQD 390
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 139 bits (351), Expect = 2e-39
Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 30/186 (16%)
Query: 25 DLQKDGFSEEQLMQETITLI------------IFEELHSIFGDDKERCPTYEE---LQNM 69
E I ++ LH P Y+E N
Sbjct: 222 QEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALH--------EHPKYKEWLRSGNS 273
Query: 70 PVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQ 129
+ ++EV R YP G + ++++ + + K +++ +Y + DP ++++PD+
Sbjct: 274 REREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDE 333
Query: 130 FNPDRFLPEKFGKYPKYNYQPFAAG----NRKCIAYKYAMLQMKIVISTVLRHFKILPSP 185
F P+RF + ++ P G +C + MK + ++ +
Sbjct: 334 FRPERFAEREE---NLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPE 390
Query: 186 RYKTID 191
+
Sbjct: 391 QSLHYS 396
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 134 bits (339), Expect = 3e-37
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-----GD 101
EE+ + E +N PV D + E LR+ I R + ++ KI +
Sbjct: 292 EEI-----QGGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT-RDVTQDKKICLSNGQE 345
Query: 102 YDIPKDATIM-NYIYAMHRDPNVYENPDQFNPDRFLPE---------KFGKYPKYNYQPF 151
Y + + + + DP +++ P+ F DRFL K G KY P+
Sbjct: 346 YHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPW 405
Query: 152 AAGNRKCIAYKYAMLQMKIVISTVLRHFKI 181
+ C +A+ +K ++ T+L F +
Sbjct: 406 GTEDNLCPGRHFAVHAIKELVFTILTRFDV 435
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 110 bits (277), Expect = 2e-28
Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIG 100
+ EL + G D R P + N+P + + E +R I +
Sbjct: 316 VQAELDQVVGRD--RLPCMGDQPNLPYVLAFLYEAMRF---SSFVPVTIPHATTANTSVL 370
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPE--KFGKYPKYNYQPFAAGNRKC 158
Y IPKD + ++++ DP + NP+ F+P RFL + K F+ G R+C
Sbjct: 371 GYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRC 430
Query: 159 IAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
I + + +Q+ + IS + +P + + +T+ P ++
Sbjct: 431 IGEELSKMQLFLFISILAHQCDFRANP--NEPAKMNFSYGLTI-------KPKSFKV 478
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 109 bits (275), Expect = 4e-28
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 45 IFEELHSIFGDDKE-RCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKI 99
+ EEL G TY++ +P+L+ I EVLR+ + + R R I
Sbjct: 316 LQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRL---RPVVPLALPHRTTRPSSI 372
Query: 100 GDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCI 159
YDIP+ ++ + H D V+E P +F PDRFL + F G R C+
Sbjct: 373 FGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPG----ANPSALAFGCGARVCL 428
Query: 160 AYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGI-YVPPPSQI 215
A L++ +V++ +L+ F +LP P + Y G+ P Q+
Sbjct: 429 GESLARLELFVVLARLLQAFTLLPPPVGALPS-------LQPDPYCGVNLKVQPFQV 478
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 104 bits (261), Expect = 3e-26
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIGDY 102
EE+ + G R P ++ Q MP +D + E+ R + + R+ Y
Sbjct: 306 EEIDRVIGPS--RIPAIKDRQEMPYMDAVVHEIQRF---ITLVPSNLPHEATRDTIFRGY 360
Query: 103 DIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAY 161
IPK ++ + ++ D + +P++F P+ FL E GK+ +Y +PF+ G R C
Sbjct: 361 LIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNEN-GKFKYSDYFKPFSTGKRVCAGE 419
Query: 162 KYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
A +++ +++ +L+HF + P K ID + +PP ++
Sbjct: 420 GLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGC-------IPPRYKL 466
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 103 bits (260), Expect = 4e-26
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 46/224 (20%)
Query: 25 DLQKDGFSEEQLMQ----------ETIT---------LI--------IFEELHSIFGDDK 57
D + S+ ++ ET T L+ ++EE+ G
Sbjct: 263 DQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFS- 321
Query: 58 ERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIGDYDIPKDATIMNY 113
R PT + + +L+ I+EVLR+ + I + + IG++ + K ++
Sbjct: 322 -RTPTISDRNRLLLLEATIREVLRL---RPVAPMLIPHKANVDSSIGEFAVDKGTEVIIN 377
Query: 114 IYAMHRDPNVYENPDQFNPDRFLPE--KFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIV 171
++A+H + + PDQF P+RFL P +Y PF AG R CI A ++ ++
Sbjct: 378 LWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLI 437
Query: 172 ISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
++ +L+ F + + L+ +V + ++
Sbjct: 438 MAWLLQRFDLEVPDDGQLP-SLEGIPKVVF-------LIDSFKV 473
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 103 bits (259), Expect = 5e-26
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIG 100
+ +E+ + G R P + +MP I EV R G I + R+I++
Sbjct: 309 VQQEIDDVIGQV--RRPEMGDQAHMPYTTAVIHEVQRF---GDIVPLGVTHMTSRDIEVQ 363
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYN-YQPFAAGNRKCI 159
+ IPK T++ + ++ +D V+E P +F+P+ FL + G + K + PF+AG R C+
Sbjct: 364 GFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQ-GHFVKPEAFLPFSAGRRACL 422
Query: 160 AYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGI-YVPPPSQI 215
A +++ + +++L+HF P P ++
Sbjct: 423 GEPLARMELFLFFTSLLQHFSFSVPTGQPRPS---------HHGVFAFLVSPSPYEL 470
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 103 bits (258), Expect = 8e-26
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIG 100
+ +E+ I G + P++++ MP + + EVLR I I + +
Sbjct: 310 VQKEIDLIMGPN--GKPSWDDKCKMPYTEAVLHEVLRF---CNIVPLGIFHATSEDAVVR 364
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPK-YNYQPFAAGNRKCI 159
Y IPK T++ +Y++H D + +P+ F+P+RFL G + K PF+ G R C+
Sbjct: 365 GYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHCL 423
Query: 160 AYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
A ++M + + +L+ F + + + DLK + +TL P P I
Sbjct: 424 GEHLARMEMFLFFTALLQRFHLHFPH--ELVPDLKPRLGMTL-------QPQPYLI 470
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 103 bits (258), Expect = 9e-26
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIGDY 102
EE+ + G + R P +E+ MP ++ I E+ R G + +ARR++++ K D+
Sbjct: 307 EEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRF---GDVIPMSLARRVKKDTKFRDF 361
Query: 103 DIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAY 161
+PK + + ++ RDP+ + NP FNP FL EK G++ K + PF+ G R C
Sbjct: 362 FLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK-GQFKKSDAFVPFSIGKRNCFGE 420
Query: 162 KYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
A +++ + +TV+++F++ S K ID + +P +
Sbjct: 421 GLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFAT-------IPRNYTM 467
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 103 bits (258), Expect = 9e-26
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIG 100
+ EE+ + G + R P ++ +MP D + EV R + + + +IK
Sbjct: 306 VQEEIERVIGRN--RSPCMQDRSHMPYTDAVVHEVQRY---IDLLPTSLPHAVTCDIKFR 360
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCI 159
+Y IPK TI+ + ++ D + NP+ F+P FL E G + K Y PF+AG R C+
Sbjct: 361 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEG-GNFKKSKYFMPFSAGKRICV 419
Query: 160 AYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
A +++ + ++++L++F + K +D VPP Q+
Sbjct: 420 GEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFAS-------VPPFYQL 468
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 101 bits (253), Expect = 5e-25
Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 21/178 (11%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIG 100
I +EL ++ G + R P + +P L+ I E R I R+ +
Sbjct: 319 IQKELDTVIGRE--RRPRLSDRPQLPYLEAFILETFRH---SSFLPFTIPHSTTRDTTLN 373
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPE--KFGKYPK-YNYQPFAAGNRK 157
+ IPK + + ++ DP ++E+P +F P+RFL P F G R+
Sbjct: 374 GFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRR 433
Query: 158 CIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
CI A ++ + ++ +L+ + P K DL +T+ +
Sbjct: 434 CIGEVLAKWEIFLFLAILLQQLEFSVPPGVKV--DLTPIYGLTM-------KHARCEH 482
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 99.2 bits (248), Expect = 2e-24
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 47 EELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYI----IARRIRREIKIGDY 102
+E+ + G R P ++ MP D I E+ R+ G + + + ++ + Y
Sbjct: 307 KEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRL---GDLIPFGVPHTVTKDTQFRGY 361
Query: 103 DIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY-QPFAAGNRKCIAY 161
IPK+ + + + DP +E P+ FNP FL G + PF+ G R C+
Sbjct: 362 VIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRICLGE 420
Query: 162 KYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
A ++ + +T+L++F I + ID E V VPP QI
Sbjct: 421 GIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGN-------VPPSYQI 467
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 66.2 bits (162), Expect = 6e-13
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
I E LR PP +I R++ ++ +G +I KD + I A +RDP +E PD FN R
Sbjct: 306 IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHRE 365
Query: 136 LPEKFGKYPKYNYQ-PFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ F +G C+ +A +++IV + VL
Sbjct: 366 DLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKM 410
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 62.6 bits (153), Expect = 8e-12
Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 24/142 (16%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
I E++RM PP R +++IG I + I I A +RDP V+++PD F+
Sbjct: 266 RAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 132 PDRFLPEKFGKYPKYNYQ-PFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTI 190
R P + F G C + + V + + + R +
Sbjct: 326 HTR--------PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERY-----ERIELA 372
Query: 191 DDLKY----------EMRVTLT 202
++ ++ + L+
Sbjct: 373 EEPTVAHNDFARRYRKLPIVLS 394
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 60.7 bits (148), Expect = 4e-11
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
+ ++E LR P + AR +I I I + + + A +RDP+++ NPD F+
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD 326
Query: 132 PDRFLPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
R P F G+ C+ A L+ +I I+T+L+
Sbjct: 327 ITR--------------SPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 60.4 bits (147), Expect = 5e-11
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
I+E +R PP +++R ++ IG + +PK T++ + A HRDP + PD+F+
Sbjct: 289 ASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 132 PDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
PDR G F G C+ A L+ + + + F
Sbjct: 349 PDRAQIRHLG---------FGKGAHFCLGAPLARLEATVALPALAARF 387
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 60.0 bits (146), Expect = 6e-11
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
R + EVLR++P ++ R E+++G++ I + ++ + A +RDP V+ PD+ +
Sbjct: 255 AQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLD 314
Query: 132 PDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
DR ++ A + + +
Sbjct: 315 VDRPDADRAL---------SAHRGHPGRLEELVTALATAALRAAAKAL 353
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 59.6 bits (145), Expect = 8e-11
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
++EVLR PP + R + ++ IP D + ++ + +RD + +++PD+F+P R
Sbjct: 278 VEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR- 336
Query: 136 LPEKFGKYPKYNYQP---FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
K F G C+ A L+ ++ + ++ F
Sbjct: 337 ---------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 59.1 bits (144), Expect = 1e-10
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
L + ++E LR P R++ ++++ + +D ++ A +RDP Y+ PD F+
Sbjct: 266 LAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFD 325
Query: 132 PDRFLPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR 186
+R P F AG R C+ A Q++ ++ + R LP R
Sbjct: 326 IER--------------DPVPSMSFGAGMRYCLGSYLARTQLRAAVAALAR----LPGLR 367
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 58.7 bits (143), Expect = 1e-10
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 61 PTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRD 120
++ ++ + + I+E LR PP R+ + +K+GD I + + +I + +RD
Sbjct: 229 NLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRD 288
Query: 121 PNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
V+ + ++F PDR F +G C+ A L+ +I I + F
Sbjct: 289 EEVFHDGEKFIPDRNPNPHLS---------FGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 58.4 bits (142), Expect = 2e-10
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
+ ++E+LR I R + +I++G I ++ I M+RD YENPD F+
Sbjct: 276 VSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD 335
Query: 132 PDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
R + FG G +C+ A +++I + +
Sbjct: 336 ARR--NARHHVGFG-----------HGIHQCLGQNLARAELEIALGGLFARI 374
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 57.7 bits (140), Expect = 4e-10
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
++E++R PP + R +I++GD+DIP+ + ++ + + +RDP + +PD +
Sbjct: 287 TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 132 PDR 134
R
Sbjct: 347 VHR 349
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 57.6 bits (140), Expect = 4e-10
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ ++E+ R + + +R + ++ IGD + + I+ + +RD V+ENPD+F
Sbjct: 273 APQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF 332
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
N +R P + FG G+ +CIA A ++ V ST+ + F
Sbjct: 333 NMNRKWPPQDPLGFG-----------FGDHRCIAEHLAKAELTTVFSTLYQKF 374
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 57.6 bits (140), Expect = 4e-10
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 61 PTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRD 120
+++ ++ L + ++E LR PP R + ++KI D I + + +I + +RD
Sbjct: 230 NSWDYVREKGAL-KAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRD 288
Query: 121 PNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
V+++PD F PDR F +G C+ A L+ +I + + F
Sbjct: 289 EEVFKDPDSFIPDRTPNPHLS---------FGSGIHLCLGAPLARLEARIALEEFAKKF 338
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 57.2 bits (139), Expect = 5e-10
Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 23/121 (19%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ ++E+LR I R+ +I++ I ++ +RD VYE+PD
Sbjct: 277 VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDAL 336
Query: 131 NPDRFLPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSP 185
+ R F G +C+ A L+++++++ ++ P+
Sbjct: 337 DIHR--------------SARHHLAFGFGVHQCLGQNLARLELEVILNALMDRV---PTL 379
Query: 186 R 186
R
Sbjct: 380 R 380
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 57.2 bits (139), Expect = 6e-10
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
I+E+LR P + R + + + + +M + + D V+ P++F+ R
Sbjct: 267 IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRN 326
Query: 136 LPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKY 195
F G C+ + A L++ ++ VLR P + + D
Sbjct: 327 PNSHLA---------FGFGTHFCLGNQLARLELSLMTERVLRRL-----PDLRLVADDSV 372
Query: 196 EMRVTLTFYNGI 207
F +G+
Sbjct: 373 LPLRPANFVSGL 384
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 57.3 bits (139), Expect = 6e-10
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ + E+LR+ I R+ +I++ +P D ++ + + DP +++P++
Sbjct: 282 MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERV 341
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R + FG G +C+ A L++++ + T+LR
Sbjct: 342 DFHR--TDNHHVAFG-----------YGVHQCVGQHLARLELEVALETLLRRV 381
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 56.9 bits (138), Expect = 7e-10
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
R + E++R Y RI R ++ + +I K +++ + A +RDP + + D+
Sbjct: 269 AQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRL 328
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R FG G C+ A L+++ V + + R F
Sbjct: 329 DVTR--EPIPHVAFG-----------HGVHHCLGAALARLELRTVFTELWRRF 368
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 56.5 bits (137), Expect = 8e-10
Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 15/112 (13%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRRE-IKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ ++E+LR+ R+ I++GD + K ++ + + DP + NP
Sbjct: 266 IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI 325
Query: 131 NPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
DR P FG G C +I I +L+
Sbjct: 326 ELDRPNPTSHLAFG-----------RGQHFCPGSALGRRHAQIGIEALLKKM 366
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 56.5 bits (137), Expect = 1e-09
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRRE-IKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
++E+LR + + R+ E ++IG I ++ + + + DP V+++P
Sbjct: 278 TPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVL 337
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ +R + FG G +C+ A ++++IV T+ R
Sbjct: 338 DVER--GARHHLAFG-----------FGPHQCLGQNLARMELQIVFDTLFRRI 377
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 56.5 bits (137), Expect = 1e-09
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
L ++E+LR P R E++IG IP+ +T++ A +RDP + +P +F+
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 132 PDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
R F G C+ A L+ ++ + + F
Sbjct: 334 VTRDTRGHLS---------FGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 56.2 bits (136), Expect = 1e-09
Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 35/156 (22%)
Query: 63 YEELQNMPVL-DRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDP 121
L++ D ++EVLR P + R ++ I D+P ++ ++ A +RDP
Sbjct: 277 LTALRDGSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDP 336
Query: 122 NVYENPDQFNPDRFLPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVL 176
+++PD F P R +P F G C+ A +++ +V+ +
Sbjct: 337 AEFDDPDTFLPGR--------------KPNRHITFGHGMHHCLGSALARIELSVVLRVLA 382
Query: 177 RHFKILPSPRYKTIDDLKY----------EMRVTLT 202
R + + E+ V T
Sbjct: 383 ERV-----SRVDLEREPAWLRAIVVQGYRELPVRFT 413
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 56.1 bits (136), Expect = 1e-09
Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
+E +R P R R++++ I + ++ ++ + +RDP +++PD+++
Sbjct: 284 ARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYD 343
Query: 132 PDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTID 191
R G F +G C+ A L+ ++V++ + R +
Sbjct: 344 ITRKTSGHVG---------FGSGVHMCVGQLVARLEGEVVLAALARKV-----AAIEIAG 389
Query: 192 DLKY----------EMRVTLT 202
LK + + LT
Sbjct: 390 PLKRRFNNTLRGLESLPIQLT 410
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 55.7 bits (135), Expect = 2e-09
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ ++E+LR G R+ R++++G I K ++ ++ A DP E P++F
Sbjct: 270 VGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERF 329
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R FG G +CI + A ++++IV T+ R
Sbjct: 330 DITR--RPAPHLAFG-----------FGAHQCIGQQLARIELQIVFETLFRRL 369
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 55.4 bits (134), Expect = 2e-09
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 23/149 (15%)
Query: 63 YEELQ-NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDP 121
+ +L+ N +++ + E++R P + R + ++G I K ++ + Y+ +RD
Sbjct: 288 FAKLKANPALVETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDD 347
Query: 122 NVYENPDQFNPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRH 178
V + P++F DR P + FG G +C+ + A +Q++I+ +L
Sbjct: 348 EVIDRPEEFIIDRPRPRQHLSFG-----------FGIHRCVGNRLAEMQLRILWEEILTR 396
Query: 179 FKILPSPRYKTIDDLKYEMRVTLTFYNGI 207
F R + + + + RV F G
Sbjct: 397 F-----SRIEVMAEPE---RVRSNFVRGY 417
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 55.3 bits (134), Expect = 2e-09
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 17/108 (15%)
Query: 76 IKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDR 134
++E LR Y P + R + I + I K ++ Y+ + +RD ++ PD F R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
Query: 135 FLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
E FG C+ A L+ I ++ +L HF
Sbjct: 282 --REMHLAFGIGIHM-----------CLGAPLARLEASIALNDILNHF 316
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 55.3 bits (134), Expect = 3e-09
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 10/109 (9%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ + EVLR I R R++++ I K + I + RD V+ PD F
Sbjct: 287 MRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF 346
Query: 131 NPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R + G C A L+ +I + T+ R F
Sbjct: 347 DVRRDTSASLA---------YGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 54.9 bits (133), Expect = 3e-09
Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
+ E+LR Y P ++ R + +E+ +GD + T M + RD + +++PD +R
Sbjct: 269 VDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER- 326
Query: 136 LPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
P G +C+ ++ ++ I+ L+
Sbjct: 327 -------------TPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 362
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 55.0 bits (133), Expect = 3e-09
Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 18/113 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+R + E++R P R+ +++ I I ++ I +RD + +PD
Sbjct: 278 AERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVL 337
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ +R FG G C+ A +++ T+ R F
Sbjct: 338 DANR--AAVSDVGFG-----------HGIHYCVGAALARSMLRMAYQTLWRRF 377
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 54.6 bits (132), Expect = 4e-09
Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 10/109 (9%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
LD ++E+LR P R + + IP T++ + HR P + +P +F
Sbjct: 296 LDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF 355
Query: 131 NPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R F G CI A L+ +I + +L
Sbjct: 356 DIRRDTAGHLA---------FGHGIHFCIGAPLARLEARIAVRALLERC 395
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 54.6 bits (132), Expect = 5e-09
Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 18/119 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ ++EVLR P + A R+ + ++ IP + + HRDP V+ + D+F
Sbjct: 286 APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 345
Query: 131 NPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR 186
+ FG G C+ A L++ ++ + P+
Sbjct: 346 DITVKREAPSIAFG-----------GGPHFCLGTALARLELTEAVAALATRL---DPPQ 390
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 53.4 bits (129), Expect = 1e-08
Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 10/109 (9%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+ ++E LR P R ++ IP +M + A +RD + PD+
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 131 NPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R F G C+ + A L+ ++ I +
Sbjct: 329 DITRDASGGVF---------FGHGIHFCLGAQLARLEGRVAIGRLFADR 368
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 53.5 bits (129), Expect = 1e-08
Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 22/139 (15%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
++E++R P + R + ++I++ + + + + +RD + + +P F+
Sbjct: 308 APTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFD 367
Query: 132 PDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK 188
R P FG G C+ A ++++ + R P
Sbjct: 368 LARN-PNPHLGFGGG----------GAHFCLGANLARREIRVAFDELRRQM-----PDVV 411
Query: 189 TIDDLKYEMRVTLTFYNGI 207
++ R+ F +GI
Sbjct: 412 ATEEPA---RLLSQFIHGI 427
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 53.1 bits (128), Expect = 1e-08
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 20/114 (17%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQF 130
+ ++E+LR+ P +AR R++ IGD IP ++ + +RD Y + +
Sbjct: 283 IPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAEL 342
Query: 131 NPDRFLPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R P F+ G C+ A +Q ++ ++ +L
Sbjct: 343 DVTR--------------CPRNILTFSHGAHHCLGAAAARMQCRVALTELLARC 382
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 53.0 bits (128), Expect = 1e-08
Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 16/106 (15%)
Query: 78 EVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLP 137
E++R YP + +R ++ I K + + DP +E P++ DR L
Sbjct: 273 ELMRRYPTVAV-SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA 331
Query: 138 EK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
G G +C+ A +++ + + L
Sbjct: 332 PIRHTTMG-----------VGAHRCVGAGLARMEVIVFLREWLGGM 366
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 52.7 bits (127), Expect = 2e-08
Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 24/149 (16%)
Query: 63 YEELQ-NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDP 121
+ ++ + +L ++E +R P R + ++ I +M A + DP
Sbjct: 312 FARVKADRNLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDP 371
Query: 122 NVYENPDQFNPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRH 178
+ P +F+P R + FG C+ A L+M++++ +L
Sbjct: 372 AQFPEPRKFDPTRP-ANRHLAFGAGSHQ-----------CLGLHLARLEMRVLLDVLLDR 419
Query: 179 FKILPSPRYKTIDDLKYEMRVTLTFYNGI 207
+ + K RV TF G
Sbjct: 420 V-----DSLELAGEPK---RVNSTFVGGF 440
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 52.3 bits (126), Expect = 2e-08
Identities = 15/109 (13%), Positives = 30/109 (27%), Gaps = 20/109 (18%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
+E+LR + R + + + + K I+ D P + R
Sbjct: 286 CEELLRRFSLVAD-GRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR- 343
Query: 136 LPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
Q F G+ C+ A ++ + + L
Sbjct: 344 -------------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRI 379
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 52.3 bits (126), Expect = 2e-08
Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 30/149 (20%)
Query: 67 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYEN 126
+ ++ R + E +R P R + ++ +I + IM + +RD V+ N
Sbjct: 295 SDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSN 354
Query: 127 PDQFNPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILP 183
PD+F+ RF P + FG G C+ A L+MKI +L
Sbjct: 355 PDEFDITRF-PNRHLGFG-----------WGAHMCLGQHLAKLEMKIFFEELLPKL---- 398
Query: 184 SPRYKTIDDLKY----------EMRVTLT 202
+ + + + T
Sbjct: 399 -KSVELSGPPRLVATNFVGGPKNVPIRFT 426
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 52.3 bits (126), Expect = 3e-08
Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 72 LDRCIKEVLRMYPP--GYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQ 129
+ ++E+ R P G R ++ + I ++ A +RD + + D+
Sbjct: 287 IPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADR 346
Query: 130 FNPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ DR FG G C+ A +++++ + +L+
Sbjct: 347 IDVDR--TPNQHLGFG-----------HGVHHCLGAPLARVELQVALEVLLQRL 387
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 52.3 bits (126), Expect = 3e-08
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 19/114 (16%)
Query: 72 LDRCIKEVLRMYPP--GYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQ 129
+ E+LR +AR ++++ I + A +RDP+V+ +PD+
Sbjct: 277 RGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR 336
Query: 130 FNPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ DR +G G+ C A +Q ++++ T+L
Sbjct: 337 IDLDR--DPNPHLAYG-----------NGHHFCTGAVLARMQTELLVDTLLERL 377
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 51.9 bits (125), Expect = 3e-08
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
L R ++E+ R + AR + +++ + + I+ D +++P +
Sbjct: 289 LQRGVEELFRRFAVVSD-ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVD 347
Query: 132 PDR 134
R
Sbjct: 348 LSR 350
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 51.9 bits (125), Expect = 3e-08
Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 19/114 (16%)
Query: 72 LDRCIKEVLRMYPP--GYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQ 129
+ R ++EVLR + R +++ G I ++ + + D + P++
Sbjct: 274 MARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEE 333
Query: 130 FNPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
F+ R FG G CI A L+++ + + +
Sbjct: 334 FDAAR--TPNPHLTFG-----------HGIWHCIGAPLARLELRTMFTKLFTRL 374
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 51.9 bits (125), Expect = 4e-08
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 21/115 (18%)
Query: 72 LDRCIKEVLRMYPP--GYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQ 129
R I E+LR P ++R +++I I + A +RDP V+ +PD+
Sbjct: 274 RPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR 333
Query: 130 FNPDRFLPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ +R P F G C A L+ ++++ VL
Sbjct: 334 IDFER--------------SPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRV 374
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 51.5 bits (124), Expect = 4e-08
Identities = 14/109 (12%), Positives = 34/109 (31%), Gaps = 20/109 (18%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
+E+ R +P AR + ++ + + + I+ D P + + R
Sbjct: 292 AEEMFRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR- 349
Query: 136 LPEKFGKYPKYNYQP-----FAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ F G +C A +++ + + L+
Sbjct: 350 -------------RSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRI 385
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 50.4 bits (121), Expect = 1e-07
Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 29/140 (20%)
Query: 76 IKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF 135
E++R P R R+ ++ I K ++ + + + D V+++P FN R
Sbjct: 303 ADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRN 362
Query: 136 LPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDD 192
P FG G CI A + + ++ + V H P K I
Sbjct: 363 -PNPHVGFGGT----------GAHYCIGANLARMTINLIFNAVADHM-----PDLKPISA 406
Query: 193 LKY----------EMRVTLT 202
+ +V T
Sbjct: 407 PERLRSGWLNGIKHWQVDYT 426
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 49.5 bits (119), Expect = 2e-07
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 16/113 (14%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQ 129
++E LR P + R ++ +GD IP ++ A+ RD + D+
Sbjct: 275 WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADR 334
Query: 130 FNPDRFLPEK---FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
F+ R + FG G C + ++ + + + F
Sbjct: 335 FDLTRTSGNRHISFG-----------HGPHVCPGAALSRMEAGVALPALYARF 376
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 49.5 bits (117), Expect = 3e-07
Identities = 31/210 (14%), Positives = 70/210 (33%), Gaps = 54/210 (25%)
Query: 18 NRKITMIDLQKDGFSEEQLMQETITLIIFEE--------LHSIFGDDKERCPTYEELQNM 69
++ T+I+ + + + L +F L I+ D + M
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV-------M 405
Query: 70 PVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATI-MNYIYAMHRD-PNVYENP 127
V+++ K L + ++ +E I I + + + YA+HR + Y P
Sbjct: 406 VVVNKLHKYSL--------VEKQ-PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456
Query: 128 DQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAY---------KYAMLQMKIV----IST 174
F+ D +P +Y Y++ I + + + +M + +
Sbjct: 457 KTFDSDDLIPPYLDQY-FYSH----------IGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505
Query: 175 VLRHFKILPSPRYKTIDDL----KYEMRVT 200
+RH + ++ L Y+ +
Sbjct: 506 KIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Score = 27.9 bits (61), Expect = 3.2
Identities = 18/151 (11%), Positives = 42/151 (27%), Gaps = 32/151 (21%)
Query: 68 NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENP 127
K++L ++ ++ ++D + I + ++ +
Sbjct: 10 ETGEHQYQYKDILSVFEDAFV-----------DNFDCKDVQDMPKSILSKEEIDHIIMSK 58
Query: 128 DQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAM-----------LQMKIVISTVL 176
D + L + Q F + I YK+ M + ++ I
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLR-INYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 177 RHFKILPS------PRYKTIDDLK---YEMR 198
R + R + L+ E+R
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 49.2 bits (118), Expect = 3e-07
Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGD-YDIPKDATIMNYIYAMHRDPNVYENPDQ 129
++E LR P + R +I + D I + I+ A +R P+ +E+ D
Sbjct: 275 WADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADT 334
Query: 130 FNPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
F+ R K FG G C+ A +++ + + ++ F
Sbjct: 335 FDATR--TVKEHLAFG-----------HGVHFCLGAPLARMEVTLALESLFGRF 375
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 45.7 bits (109), Expect = 4e-06
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 23/113 (20%)
Query: 72 LDRCIKEVLRMYPPGYIIARRI-RREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 130
+D +EVLR A R+ ++++ DI + + A +R P D+F
Sbjct: 259 IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP-----GDRF 313
Query: 131 NPDRFLPEK----FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
+ R + FG G CI A LQ+++ + V+ F
Sbjct: 314 DITR--EKATHMAFG-----------HGIHHCIGAPLARLQLRVALPAVVGRF 353
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.3 bits (78), Expect = 0.032
Identities = 28/184 (15%), Positives = 47/184 (25%), Gaps = 80/184 (43%)
Query: 71 VLDRC-----------IKEVLRMYPPGYII------ARRIRREIKIGDYDIPKDATIMNY 113
V +R I +++ P I +RIR NY
Sbjct: 1645 VWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIR----------------ENY 1688
Query: 114 IYAMHRDPNVYENPDQFNPDRFLPEKFGKY----PK------YNYQPFAAGNRKCIAYKY 163
AM + V + + E Y K QP
Sbjct: 1689 S-AMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQP------------- 1734
Query: 164 AMLQMKIVISTVLRHFKILPSPRYK------------------TIDDLKYEMRVTLTFYN 205
A+ M+ L+ ++P+ +I+ L V + FY
Sbjct: 1735 ALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESL-----VEVVFYR 1789
Query: 206 GIYV 209
G+ +
Sbjct: 1790 GMTM 1793
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural
genomics/proteomics initiative, RSGI, structural
genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2
b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Length = 184
Score = 28.6 bits (65), Expect = 1.1
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 193 LKYEMRVTLTFYNG--IYVPPPSQINEEVQQT 222
K M Y G I V PP+ + +V T
Sbjct: 104 FKEGMTALGDMYEGQPIKVTPPTVVELKVVDT 135
>3iai_A Carbonic anhydrase 9; transmembrane proteins, cell membrane,
projection, disulfide bond, glycoprotein, lyase,
membrane, binding, nucleus; HET: AZM NAG BMA MAN; 2.20A
{Homo sapiens}
Length = 257
Score = 27.7 bits (62), Expect = 2.8
Identities = 6/53 (11%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 97 IKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQ 149
++ G + +++ + + + + LP F +Y + Y+
Sbjct: 145 LEEGPEENSAYEQLLSRLEEI-AEEGSETQVPGLDISALLPSDFSRY--FQYE 194
>1rj5_A Carbonic anhydrase XIV; beta-sheet, alpha-helix, zinc enzyme,
lyase; HET: NAG BMA; 2.81A {Mus musculus} SCOP: b.74.1.1
PDB: 1rj6_A*
Length = 261
Score = 27.8 bits (62), Expect = 3.0
Identities = 8/53 (15%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 97 IKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQ 149
I++G+ + P I++ ++ + R + + F+ P++ ++ + Y
Sbjct: 147 IEVGETENPAYDHILSRLHEI-RYKDQKTSVPPFSVRELFPQQLEQF--FRYN 196
>3jxg_A Receptor-type tyrosine-protein phosphatase gamma; Ca-like domain,
glycoprotein, hydrolase, membrane, phosphoprotein,
transmembrane, cell adhesion; 1.70A {Mus musculus} PDB:
3kld_B* 3jxh_C
Length = 269
Score = 26.7 bits (59), Expect = 5.9
Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Query: 97 IKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQ 149
++ D I++ + + D F LP G Y Y Y
Sbjct: 153 FQVSPRDNSALDPIIHGLKGV-VHHEKETFLDPFILRDLLPASLGSY--YRYT 202
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural
genomics, APC62130.1, methyltransferase, PSI-2, P
structure initiative; 2.00A {Bacteroides fragilis} PDB:
3fq6_A
Length = 115
Score = 25.9 bits (58), Expect = 6.9
Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 10/33 (30%)
Query: 34 EQLMQETITLIIFE----------ELHSIFGDD 56
+ L+ E T++ +E + FG +
Sbjct: 37 KSLVDEHRTMVFYESPHRLLKTLTQFAEYFGPE 69
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein;
2.20A {Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 26.3 bits (58), Expect = 7.5
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 14/66 (21%)
Query: 12 NNNGVPNRKITMIDLQKD-GFSEEQLMQETITLIIFEELHSIF---GDDKERCPTYEELQ 67
+ R + +++K+ GFS Q+ L+S F + + E+ Q
Sbjct: 3 SRASTLLRDEELEEIKKETGFSHSQI----------TRLYSRFTSLDKGENGTLSREDFQ 52
Query: 68 NMPVLD 73
+P L
Sbjct: 53 RIPELA 58
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center
for structural genomics, JCSG; HET: MSE EPE; 1.60A
{Bacteroides thetaiotaomicron vpi-5482}
Length = 443
Score = 26.4 bits (58), Expect = 8.4
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 115 YAMHRDPNVYENPDQFNPDRFLPEK 139
+ N E+ + FNP ++
Sbjct: 39 GQGNNRINPIEDYNIFNPTELNTDQ 63
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 26.1 bits (56), Expect = 8.5
Identities = 5/26 (19%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Query: 76 IKEV---LRMYPPGYIIARRIRREIK 98
+K++ L++Y A I+ ++
Sbjct: 22 LKKLQASLKLYADDSAPALAIKATME 47
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.139 0.416
Gapped
Lambda K H
0.267 0.0450 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,702,469
Number of extensions: 233096
Number of successful extensions: 719
Number of sequences better than 10.0: 1
Number of HSP's gapped: 619
Number of HSP's successfully gapped: 109
Length of query: 222
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 132
Effective length of database: 4,188,903
Effective search space: 552935196
Effective search space used: 552935196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.7 bits)