RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9539
(222 letters)
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 133 bits (335), Expect = 2e-37
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 31 FSEEQLMQETITLIIFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIA 90
E + + EE+ ++ + PTY+ + M LD + E LR++P +
Sbjct: 290 IMYELATHPDVQQKLQEEIDAVLPNK--APPTYDTVLQMEYLDMVVNETLRLFPIAMRLE 347
Query: 91 RRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQP 150
R +++++I IPK +M YA+HRDP + P++F P+RF + Y Y P
Sbjct: 348 RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTP 407
Query: 151 FAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
F +G R CI ++A++ MK+ + VL++F P +T LK + L + +
Sbjct: 408 FGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCK--ETQIPLKLSLGGLLQPEKPVVL 464
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 116 bits (290), Expect = 5e-31
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYP-PGYIIARRIRREIKIGDYD 103
+ +E+ I G + + P++++ MP + + EVLR I + + Y
Sbjct: 297 VQKEIDLIMGPNGK--PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 354
Query: 104 IPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKY 163
IPK T++ +Y++H D + +P+ F+P+RFL K PF+ G R C+
Sbjct: 355 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHL 414
Query: 164 AMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTL 201
A ++M + + +L+ F + + + DLK + +TL
Sbjct: 415 ARMEMFLFFTALLQRFHLHFPH--ELVPDLKPRLGMTL 450
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 111 bits (277), Expect = 3e-29
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 10/172 (5%)
Query: 45 IFEELHSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIAR-RIRREIKIGDYD 103
+ +E+ + G R P ++ MP D I E+ R+ + ++ + Y
Sbjct: 297 VQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 354
Query: 104 IPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKY 163
IPK+ + + + DP +E P+ FNP FL + PF+ G R C+
Sbjct: 355 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGI 414
Query: 164 AMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
A ++ + +T+L++F I + ID +T VPP QI
Sbjct: 415 ARTELFLFFTTILQNFSIASPVPPEDID-------LTPRESGVGNVPPSYQI 459
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 96.7 bits (239), Expect = 6e-24
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 61 PTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHR 119
P+Y++++ + + + E LR++P + + + + G+Y + K +M I +HR
Sbjct: 301 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 360
Query: 120 DPNVY-ENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRH 178
D ++ ++ ++F P+RF P++ ++PF G R CI ++A+ + +V+ +L+H
Sbjct: 361 DKTIWGDDVEEFRPERFENPS--AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKH 418
Query: 179 FKILPSPRYKTIDDLKYEMRVTLT 202
F Y +L + +TL
Sbjct: 419 FDFEDHTNY----ELDIKETLTLK 438
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 94.0 bits (232), Expect = 5e-23
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 50 HSIFGDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIR-REIKIGDYDIPKDA 108
+ G ++ P ++ +MP D + EV R +IK +Y IPK
Sbjct: 303 ERVIGRNRS--PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGT 360
Query: 109 TIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQM 168
TI+ + ++ D + NP+ F+P FL E + PF+AG R C+ A +++
Sbjct: 361 TILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMEL 420
Query: 169 KIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPPPSQI 215
+ ++++L++F + K +D T VPP Q+
Sbjct: 421 FLFLTSILQNFNLKSLVDPKNLD-------TTPVVNGFASVPPFYQL 460
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 84.5 bits (207), Expect = 1e-19
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 67 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYEN 126
+ ++ R + E +R P R + ++ +I + IM + +RD V+ N
Sbjct: 295 SDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSN 354
Query: 127 PDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 182
PD+F+ RF + F G C+ A L+MKI +L K +
Sbjct: 355 PDEFDITRFP---------NRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSV 401
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 80.9 bits (198), Expect = 2e-18
Identities = 22/136 (16%), Positives = 54/136 (39%), Gaps = 7/136 (5%)
Query: 60 CPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHR 119
+ N + ++EV R YP G + ++++ + + K +++ +Y +
Sbjct: 259 YKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNH 318
Query: 120 DPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAG----NRKCIAYKYAMLQMKIVISTV 175
DP ++++PD+F P+RF + ++ P G +C + MK + +
Sbjct: 319 DPRLWDHPDEFRPERFAEREEN---LFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFL 375
Query: 176 LRHFKILPSPRYKTID 191
+ + +
Sbjct: 376 VHQIEYDVPEQSLHYS 391
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 78.3 bits (191), Expect = 1e-17
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 82 MYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG 141
+ + I + I+ A +R P+ +E+ D F+ R + E
Sbjct: 281 PAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTVKE--- 337
Query: 142 KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 182
+ F G C+ A +++ + + ++ F L
Sbjct: 338 ------HLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDL 372
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 77.2 bits (188), Expect = 3e-17
Identities = 35/216 (16%), Positives = 76/216 (35%), Gaps = 18/216 (8%)
Query: 1 MAKTQKQHEDSNNNGVPNRKITMIDLQKDGFSEEQLMQETITLII-------FEELHSIF 53
+ ++ + + + I + D S ++L + L++ +
Sbjct: 194 ILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTY 253
Query: 54 GDDKERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNY 113
++ L ++E+LR P R E++IG IP+ +T++
Sbjct: 254 LLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVA 313
Query: 114 IYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVIS 173
A +RDP + +P +F+ R + F G C+ A L+ ++ +
Sbjct: 314 NGAANRDPKQFPDPHRFDVTRD---------TRGHLSFGQGIHFCMGRPLAKLEGEVALR 364
Query: 174 TVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
+ F L DD+ + + L + + V
Sbjct: 365 ALFGRFPALSLG--IDADDVVWRRSLLLRGIDHLPV 398
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 76.5 bits (186), Expect = 6e-17
Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 60 CPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHR 119
++ L+ +P L+ +KE LR++PP I+ R + E ++ + I + + +R
Sbjct: 291 SVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNR 350
Query: 120 DPNVYENPDQFNPDRFL-PEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRH 178
P + +P F P R+ P + ++ + PF AG +C+ +A++Q+K + S +LR
Sbjct: 351 IPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLRE 410
Query: 179 FKILPSPRYKTIDDLKYEMRVTLTFYNGIYV 209
++ + + ++ + V
Sbjct: 411 YEFEMAQPPE--SYRNDHSKMVVQLAQPAAV 439
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 75.6 bits (184), Expect = 1e-16
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 82 MYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG 141
I R + ++ IGD + + I+ + +RD V+ENPD+FN +R P
Sbjct: 279 HTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP--- 335
Query: 142 KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFK 180
+ F G+ +CIA A ++ V ST+ + F
Sbjct: 336 ----QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFP 370
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 73.7 bits (179), Expect = 6e-16
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 9/103 (8%)
Query: 81 RMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEK 139
P +++ R ++ +GD IP ++ A+ RD + D+F+ R
Sbjct: 278 FSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG-- 335
Query: 140 FGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 182
+ F G C + ++ + + + F L
Sbjct: 336 ------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHL 372
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 72.9 bits (177), Expect = 1e-15
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 111 MNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKI 170
+ + + + F P+RFL E+ P Y PF G R C+ +A+L+ I
Sbjct: 291 TLVLSPYVTQRLHFPDGEAFRPERFLEERGT--PSGRYFPFGLGQRLCLGRDFALLEGPI 348
Query: 171 VISTVLRHFKILPSPRYKTIDDLKYEMRVTLTFYNGIYVPP 211
V+ R F++ P P + +VTL G+ P
Sbjct: 349 VLRAFFRRFRLDPLP------FPRVLAQVTLRPEGGLPARP 383
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 70.6 bits (171), Expect = 5e-15
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 82 MYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG 141
+ P R R ++ + +I K +++ + A +RDP + + D+ + R
Sbjct: 276 LTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR------- 328
Query: 142 KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 182
+ F G C+ A L+++ V + + R F L
Sbjct: 329 --EPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPAL 367
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 69.4 bits (168), Expect = 2e-14
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 75 CIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDR 134
+ V + P R +++ I I ++ I +RD + +PD + +R
Sbjct: 279 VNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 338
Query: 135 FLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFK 180
+ F G C+ A +++ T+ R F
Sbjct: 339 A---------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFP 375
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 68.7 bits (166), Expect = 3e-14
Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 9/123 (7%)
Query: 58 ERCPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAM 117
E + + ++R +++I I + A
Sbjct: 255 ELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAA 314
Query: 118 HRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLR 177
+RDP V+ +PD+ + +R + F G C A L+ ++++ VL
Sbjct: 315 NRDPEVFPDPDRIDFERS---------PNPHVSFGFGPHYCPGGMLARLESELLVDAVLD 365
Query: 178 HFK 180
Sbjct: 366 RVP 368
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 68.3 bits (165), Expect = 4e-14
Identities = 22/107 (20%), Positives = 33/107 (30%), Gaps = 14/107 (13%)
Query: 101 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIA 160
I K + I + RD V+ PD F+ R + G C
Sbjct: 302 GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPG 352
Query: 161 YKYAMLQMKIVISTVLRHFKIL-----PSPRYKTIDDLKYEMRVTLT 202
A L+ +I + T+ R F + P Y + V L
Sbjct: 353 VSLARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILK 399
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 66.8 bits (161), Expect = 1e-13
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 60 CPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHR 119
+ + ++E LR PP R + ++KI D I + + +I + +R
Sbjct: 228 LYNSWDYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANR 287
Query: 120 DPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
D V+++PD F PDR + F +G C+ A L+ +I + + F
Sbjct: 288 DEEVFKDPDSFIPDRT---------PNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
Query: 180 KILP 183
++
Sbjct: 339 RVKE 342
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 66.3 bits (160), Expect = 2e-13
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 9/121 (7%)
Query: 60 CPTYEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHR 119
+EL P E L R + + + + K I+
Sbjct: 258 PEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGL 317
Query: 120 DPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 179
D P + R K ++ F G+ C+ A ++ + + L
Sbjct: 318 DERENACPMHVDFSR---------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRI 368
Query: 180 K 180
Sbjct: 369 P 369
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 64.4 bits (155), Expect = 7e-13
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 102 YDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAY 161
+ K ++ + + DP + NP DR P ++ F G C
Sbjct: 296 VLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGS 347
Query: 162 KYAMLQMKIVISTVLRHFK 180
+I I +L+
Sbjct: 348 ALGRRHAQIGIEALLKKMP 366
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 63.7 bits (153), Expect = 1e-12
Identities = 35/172 (20%), Positives = 70/172 (40%), Gaps = 14/172 (8%)
Query: 17 PNRKITMIDLQKDGFSEEQLMQETITLII-----FEELHSIFGDDKERCPTYEELQNMPV 71
+ + + S+ + + I L+I L S D R ++ ++ +
Sbjct: 180 NSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENL 239
Query: 72 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
+ I+E LR PP R+ + +K+GD I + + +I + +RD V+ + ++F
Sbjct: 240 YLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 132 PDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILP 183
PDR + F +G C+ A L+ +I I + F+ +
Sbjct: 300 PDRN---------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIE 342
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 26.8 bits (58), Expect = 2.0
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 85 PGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 131
P + RI + D+ + KD + I + + + +PDQF
Sbjct: 229 PKSVTPSRIAENFDVWDFRLDKD--ELGEIAKLDQGKRLGPDPDQFG 273
>d2ahua1 c.124.1.3 (A:283-529) Putative enzyme YdiF C-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 247
Score = 25.4 bits (55), Expect = 5.2
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 88 IIARRIRREIKIGDY 102
++ARR E++ G
Sbjct: 8 LVARRALFEMRKGAV 22
>d2j44a1 b.3.1.3 (A:110-223) Pullulanase PulA {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 114
Score = 24.8 bits (54), Expect = 5.3
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 86 GYIIARRIRREIKIGDYD-IPKDATIMNYIYAMHRDPNVYENPDQFN 131
G+++ + ++KI + D + I+ D ++Y NP +
Sbjct: 67 GFLLLDESKGDVKIRKENYKFTDLKNHSQIFLKDDDESIYTNPYYVH 113
>d1rj6a_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus),
isozyme XIV [TaxId: 10090]}
Length = 259
Score = 25.2 bits (54), Expect = 7.6
Identities = 9/51 (17%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 97 IKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYN 147
I++G+ + P I++ ++ R + + F+ P++ ++ +YN
Sbjct: 145 IEVGETENPAYDHILSRLHE-IRYKDQKTSVPPFSVRELFPQQLEQFFRYN 194
>d1ivha2 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM domains
{Human (Homo sapiens) [TaxId: 9606]}
Length = 236
Score = 24.7 bits (53), Expect = 9.6
Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 3/118 (2%)
Query: 24 IDLQKDGFSEEQLM-QETITLIIFEEL--HSIFGDDKERCPTYEELQNMPVLDRCIKEVL 80
+D +G SEEQ ++T+ + E L + D E +
Sbjct: 1 VDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITA 60
Query: 81 RMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPE 138
+ G + + + ++ + N ++ +++LP+
Sbjct: 61 PVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPK 118
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.139 0.416
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 930,358
Number of extensions: 49033
Number of successful extensions: 172
Number of sequences better than 10.0: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 31
Length of query: 222
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 140
Effective length of database: 1,281,736
Effective search space: 179443040
Effective search space used: 179443040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)