BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy954
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 198 bits (503), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 185/358 (51%), Gaps = 41/358 (11%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIH-VYSA 68
V+IS + F +TV+ YIYWTD + +YRA K+ G+++I M RL P I V
Sbjct: 2588 VVISTAFHSFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAMTTRLPTQPSGISTVVKT 2647
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKC--DESTKLVNEGRMCVAKN-ITCDGSK 125
Q+CS NPC+ NGGC+ C PGPNG AEC+C + S L N+ + CV C+ +
Sbjct: 2648 QQQQCS-NPCDQFNGGCSHICAPGPNG-AECQCPHEGSWYLANDNKYCVVDTGARCNQFQ 2705
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQI---TGVSQPPGELGVPGHVQ---- 178
F C NG+CIS+ W CD D+DCGD SDE P C T + G VP H +
Sbjct: 2706 FTCLNGRCISQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCANGRC-VPYHYRCDFY 2764
Query: 179 -------------------ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET--EFTCT 217
T + G + ++ V G+ N +N DE+ TC
Sbjct: 2765 NDCGDNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHDNDTSDEKNCPPITCQ 2824
Query: 218 EN--KAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCINT 274
+ K C+P+ +LCDGD DC DG+DEN + C +C ++F C + RCI +
Sbjct: 2825 PDFAKCQTTNICVPRAFLCDGDNDCGDGSDEN--PIYCASH-TCRSNEFQCVSPHRCIPS 2881
Query: 275 GWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
W CD + DC D SDE C +CS+ +F C N +CI ++ CDG++DCGD SDE
Sbjct: 2882 YWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRCISSSWVCDGDNDCGDMSDE 2939
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 156/332 (46%), Gaps = 39/332 (11%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA+T+ + ++WTD R V + K+ G+ + +V P DIHV Q N
Sbjct: 3411 HPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTH-KPFDIHVLHPYRQPIMSN 3469
Query: 77 PCNIHNGGCAQSCHPGPNG---TAECKCDESTKLVNEGRMCVAKNITCDGSKFFC-RNGK 132
PC +NGGC+ C G T EC D T + + +C+ C ++F C N K
Sbjct: 3470 PCATNNGGCSHLCLIKAGGRGFTCECPDDFQTVQLRDRTLCMP---MCSSTQFLCGNNEK 3526
Query: 133 CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVM 192
CI W CDG DC D SDE + C + + Q G + P +
Sbjct: 3527 CIPIWWKCDGQKDCSDGSDES-DLCPHRFCRLGQFQCRDG--------NCTSPQALCNAR 3577
Query: 193 TTVQTG------LMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE 246
G L H +C E E+ C + CIP+ W CD DC+D +DE
Sbjct: 3578 QDCADGSDEDRVLCEH---HRC-EANEWQCANKR------CIPEYWQCDSVDDCLDNSDE 3627
Query: 247 NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECHDKYRTCSSE- 304
+ + +C ++ C P QF C NGRCI W CD DNDCGD SDE EC C +
Sbjct: 3628 DPS--HCASRT-CRPGQFKCNNGRCIPQSWKCDVDNDCGDYSDEPIHECMTAAYNCDNHT 3684
Query: 305 EFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNC 335
EF+C+ N++CI + C+G DDC D SDE C
Sbjct: 3685 EFSCKTNYRCIPQWAVCNGFDDCRDNSDEQGC 3716
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 107/213 (50%), Gaps = 54/213 (25%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C NG+CIS W CDGD+DCGD SDED + H ++
Sbjct: 2907 SCSANQFHCDNGRCISSSWVCDGDNDCGDMSDEDQRH-------------------HCEL 2947
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
S +T T + + P NR+ CIP+ W+CDGD D
Sbjct: 2948 QNCS---------STEFTCINSRPPNRR-------------------CIPQHWVCDGDAD 2979
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
C D DE NC + +CS +FSC NGRCI + CD NDCGD SDE + C Y
Sbjct: 2980 CADALDE---LQNCTMR-ACSTGEFSCANGRCIRQSFRCDRRNDCGDYSDE-RGC--SYP 3032
Query: 300 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C ++F CQN +CI K Y CD ++DCGD SDE
Sbjct: 3033 PCRDDQFTCQNGQCITKLYVCDEDNDCGDGSDE 3065
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 144/376 (38%), Gaps = 113/376 (30%)
Query: 12 ISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQ 71
+ +PF +TV ++ ++ TD +L + R K G +M +V+R S + Y AD Q
Sbjct: 909 VDQMTHPFGLTVFKDNVFLTDWRLGAIIRVRKSDGGDMT-VVRRGISSIMHVKAYDADLQ 967
Query: 72 KCSVNPCN--IH-NGGCAQSCHPGPNGTAECKCDESTKLV-------------------- 108
N C+ H NG C+ C P PN C C KL
Sbjct: 968 T-GTNYCSQTTHPNGDCSHFCFPVPNFQRVCGCPYGMKLQRDQMTCEGDPAREPPTQQCG 1026
Query: 109 ------NEGR---------------------MCVAKNITCDGSKFFC-RNGKCISRMWSC 140
N G+ C A N TC S F C G+CI W C
Sbjct: 1027 SSSFPCNNGKCVPSIFRCDGVDDCHDNSDEHQCGALNNTCSSSAFTCVHGGQCIPGQWRC 1086
Query: 141 DGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLM 200
D +DC D SDE C + + PP
Sbjct: 1087 DKQNDCLDGSDE--QNCPTRSPSSTCPP-------------------------------- 1112
Query: 201 NHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCS 260
T FTC + CIPK+W+CD D DC DG+DE NC +C
Sbjct: 1113 -----------TSFTC------DNHMCIPKEWVCDTDNDCSDGSDEK----NCQASGTCH 1151
Query: 261 PDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQN-FKCIRKTYH 319
P QF C + RCI+ ++CD D DC DGSDE C+S +F C + CI Y
Sbjct: 1152 PTQFRCPDHRCISPLYVCDGDKDCVDGSDEAG----CVLNCTSSQFKCADGSSCINSRYR 1207
Query: 320 CDGEDDCGDRSDEFNC 335
CDG DC D SDE C
Sbjct: 1208 CDGVYDCKDNSDEAGC 1223
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 94/206 (45%), Gaps = 59/206 (28%)
Query: 133 CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVM 192
C+ R + CDGD+DCGD SDE+P YC
Sbjct: 2836 CVPRAFLCDGDNDCGDGSDENPIYCASHTC------------------------------ 2865
Query: 193 TTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALN 252
EF C +CIP W CDG+ DCVD +DE T +
Sbjct: 2866 -----------------RSNEFQCVSPH-----RCIPSYWFCDGEADCVDSSDEPDTCGH 2903
Query: 253 CPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC---- 308
+SCS +QF C NGRCI++ W+CD DNDCGD SDE + H + + CSS EF C
Sbjct: 2904 --SLNSCSANQFHCDNGRCISSSWVCDGDNDCGDMSDEDQRHHCELQNCSSTEFTCINSR 2961
Query: 309 -QNFKCIRKTYHCDGEDDCGDRSDEF 333
N +CI + + CDG+ DC D DE
Sbjct: 2962 PPNRRCIPQHWVCDGDADCADALDEL 2987
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN---VQITGVSQPPGELGVP 174
C S+F C + +CI W CD ++DCGDNSDE + C+ Q T P L
Sbjct: 3761 CTESEFRCADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALACD 3820
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLC 234
G S PN C F C + CI W+C
Sbjct: 3821 GRADCLDASDESACPT----------RFPNGTYC-PAAMFECKNHV------CIQSFWIC 3863
Query: 235 DGDPDCVDGADENT-TALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE 293
DG+ DCVDG+DE N P +S P +F C N RCI LC+ +DCGDGSDE +E
Sbjct: 3864 DGENDCVDGSDEEIHLCFNVPCES---PQRFRCDNSRCIYGHQLCNGVDDCGDGSDEKEE 3920
Query: 294 CHDK--YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
K ++ C+ E+ C N C+ + Y CD DDCGD SDE CN
Sbjct: 3921 HCRKPTHKPCTDTEYKCSNGNCVSQHYVCDNVDDCGDLSDETGCN 3965
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC ++F C + +CIS ++ CDGD DC D SDE N + G + +
Sbjct: 1149 TCHPTQFRCPDHRCISPLYVCDGDKDCVDGSDEAGCVLNCTSSQFKCADGSSCINSRYRC 1208
Query: 180 TGV-------------SQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQ 226
GV ++PPG M HP+ EF C +
Sbjct: 1209 DGVYDCKDNSDEAGCPTRPPG------------MCHPD--------EFQCQGD-----GT 1243
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CIP W CDG PDC+ G+DE+ + PK +CSP F C NG CI W+CD DNDC D
Sbjct: 1244 CIPNTWECDGHPDCIQGSDEHNGCV--PK--TCSPSHFLCDNGNCIYNSWVCDGDNDCRD 1299
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDE 332
SDE K+C + C S ++ C + C+ + CDG DC + +DE
Sbjct: 1300 MSDE-KDCPTQPFHCPSSQWQCPGYSICVNLSALCDGVFDCPNGTDE 1345
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 105/223 (47%), Gaps = 31/223 (13%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG--VPGHVQ 178
C+ +++ C N +CI W CD DDC DNSDEDP++C + Q G +P +
Sbjct: 3596 CEANEWQCANKRCIPEYWQCDSVDDCLDNSDEDPSHCASRTCRPGQFKCNNGRCIPQSWK 3655
Query: 179 IT-----GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWL 233
G I MT CD TEF+C N +CIP+ +
Sbjct: 3656 CDVDNDCGDYSDEPIHECMTAAY----------NCDNHTEFSCKTNY-----RCIPQWAV 3700
Query: 234 CDGDPDCVDGADENTTALNCPKQSSCSPD-QFSCGNGRCINTGWLCDHDNDCGDGSDEGK 292
C+G DC D +DE + C P F CGN CI W CD +DCGD SDE +
Sbjct: 3701 CNGFDDCRDNSDEQGC-----ESVPCHPSGDFRCGNHHCIPLRWKCDGIDDCGDNSDE-E 3754
Query: 293 ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C R C+ EF C + +CI + CD E+DCGD SDE +C
Sbjct: 3755 SCVP--RECTESEFRCADQQCIPSRWVCDQENDCGDNSDERDC 3795
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 98/250 (39%), Gaps = 91/250 (36%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C F C NG CI W CDG DC D++DE + PP G
Sbjct: 28 CGSGNFRCDNGYCIPASWRCDGTRDCLDDTDE-----------IGCPPRSCG-------- 68
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+G F C CIP W+CD D DC
Sbjct: 69 ----------------SGF--------------FLCPA-----EGTCIPSSWVCDQDKDC 93
Query: 241 VDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE---------- 290
DGADE NCP ++CS Q +C NG+C+ + CDH +DC DGSDE
Sbjct: 94 SDGADEQQ---NCPG-TTCSSQQLTCSNGQCVPIEYRCDHVSDCPDGSDERNCYYPTCDQ 149
Query: 291 -----------GKECHDKY------------RTCSSEEFACQNFKCIRKTYHCDGEDDCG 327
++C K CS +EF C + +CI + Y CD ++DC
Sbjct: 150 LTCANGACYNTSQKCDHKVDCRDSSDEANCTTLCSQKEFQCGSGECILRAYVCDHDNDCE 209
Query: 328 DRSDEFNCNY 337
D SDE NCNY
Sbjct: 210 DNSDEHNCNY 219
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 123 GSKFFC--RNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG--VPGHVQ 178
GS FF G CI W CD D DC D +DE N C Q G VP +
Sbjct: 68 GSGFFLCPAEGTCIPSSWVCDQDKDCSDGADEQQN-CPGTTCSSQQLTCSNGQCVPIEYR 126
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET--EFTCTENKAWNRAQCIPKKWLCDG 236
VS P + + R C T + TC +N +Q CD
Sbjct: 127 CDHVSDCP--------------DGSDERNCYYPTCDQLTCANGACYNTSQ------KCDH 166
Query: 237 DPDCVDGADE-NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECH 295
DC D +DE N T L CS +F CG+G CI ++CDHDNDC D SDE H
Sbjct: 167 KVDCRDSSDEANCTTL-------CSQKEFQCGSGECILRAYVCDHDNDCEDNSDE----H 215
Query: 296 D-KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ Y TC +F C N +CI + + CDG+DDC D DE C
Sbjct: 216 NCNYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGC 256
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
+ +FTC + CI + W CD D DC DG+DE T +C F+C NGR
Sbjct: 2703 QFQFTCLNGR------CISQDWKCDNDNDCGDGSDELPTVC---AFHTCRSTAFTCANGR 2753
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTC-SSEEFACQNFKCIRKTYHCDGEDDC--G 327
C+ + CD NDCGD SDE C +R+C S+ EF C N +CI +Y C+G ++C
Sbjct: 2754 CVPYHYRCDFYNDCGDNSDEAG-C--LFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHDN 2810
Query: 328 DRSDEFNC 335
D SDE NC
Sbjct: 2811 DTSDEKNC 2818
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRK 316
+ C+ QF+C NGRCI+ W CD+DNDCGDGSDE + TC S F C N +C+
Sbjct: 2699 ARCNQFQFTCLNGRCISQDWKCDNDNDCGDGSDELPTVC-AFHTCRSTAFTCANGRCVPY 2757
Query: 317 TYHCDGEDDCGDRSDEFNCNY 337
Y CD +DCGD SDE C +
Sbjct: 2758 HYRCDFYNDCGDNSDEAGCLF 2778
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 52/184 (28%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C + F C+N CI W CDG++DC D SDE+ + C VP
Sbjct: 3844 CPAAMFECKNHVCIQSFWICDGENDCVDGSDEEIHLC-------------FNVP------ 3884
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
C+ F C + ++CI LC+G DC
Sbjct: 3885 ---------------------------CESPQRFRC------DNSRCIYGHQLCNGVDDC 3911
Query: 241 VDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRT 300
DG+DE P C+ ++ C NG C++ ++CD+ +DCGD SDE + RT
Sbjct: 3912 GDGSDEKEEHCRKPTHKPCTDTEYKCSNGNCVSQHYVCDNVDDCGDLSDETGCNLGENRT 3971
Query: 301 CSSE 304
C+ +
Sbjct: 3972 CAEK 3975
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 57/179 (31%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C +F C +G+CI R + CD D+DC DNSDE + CN G GH
Sbjct: 183 CSQKEFQCGSGECILRAYVCDHDNDCEDNSDE--HNCNYDTCG-----------GH---- 225
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+FTC+ QCI + W+CDGD DC
Sbjct: 226 --------------------------------QFTCSN------GQCINQNWVCDGDDDC 247
Query: 241 VDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDCGDGSDEGKECHDKY 298
D DE+ N + +C P +++C G+GRCI+ +CD DC +G DE +Y
Sbjct: 248 QDSGDEDGCESN-QRHHTCYPREWACPGSGRCISMDKVCDGVPDCPEGEDENNATSGRY 305
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
M+L+ +P+ + VH +++Y++D Q + R +K +G+N + + R + VY
Sbjct: 1955 MILVHHLAHPWGLVVHGSFLYYSDEQYEVIERVDKSSGSNKVVFRDNIP-YLRGLRVYHH 2013
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKN 118
+ S N C+ + C Q C P P G C C KL +GR C N
Sbjct: 2014 RNAADSSNGCSNNPNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN 2063
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 3 IATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRD 62
+A G S+V +PF I++ ++++TD V +A K T N ++ + +P
Sbjct: 593 VARGGSLVP-----HPFGISLFEEHVFFTDWTKMAVMKANKFTDTNP-QVYHQSSLTPFG 646
Query: 63 IHVYSADSQKCSVNPCNIHNGGCAQSC---HPGPNGTA--ECKCDESTKLVNEGRMCVA- 116
+ VY A Q + NPC +NGGCAQ C H NG CKC+ +L + CVA
Sbjct: 647 VTVYHALRQPNATNPCGNNNGGCAQICVLSHRTDNGGLGYRCKCEFGFELDADEHHCVAV 706
Query: 117 KNITCDGSKFFCR 129
KN S+ R
Sbjct: 707 KNFLLFSSQTAVR 719
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED 153
TC G +F C NG+CI++ W CDGDDDC D+ DED
Sbjct: 221 TCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDED 254
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 6 GASMVLISATIYP--FAITVHRNYIYWTDLQLRGVYRAEKHTG-ANMIEMVKRLEDSPRD 62
G S V+ + YP + ITV I W D LR V++A K G + +++ + RD
Sbjct: 2267 GESQVVRYGSRYPTPYGITVFGESIIWVDRNLRKVFQASKQPGNTDPPTVIRDSINLLRD 2326
Query: 63 IHVYSADSQKCSV-----NPCNIHNGGCAQSCHPGPN-GTAECKCDESTKLVNEGRMCVA 116
+ ++ Q S NPC NGGC+ C P T +C C T L ++G+ C
Sbjct: 2327 VTIFDEHVQPLSPAELNNNPCLQSNGGCSHFCFALPELPTPKCGCAFGT-LEDDGKNCAT 2385
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P A+T+ + ++WTD V +A K G N +V P I Q S N
Sbjct: 1645 HPHALTLFEDSVFWTDRGTHQVMQANKWHGRNQ-SVVMYSVPQPLGIIAIHPSRQPSSPN 1703
Query: 77 PC 78
PC
Sbjct: 1704 PC 1705
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 197 bits (501), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 174/361 (48%), Gaps = 48/361 (13%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
V+++A ++ F +T++ YIYWTDL + +YRA K+ G+ I M L PR I+ +
Sbjct: 2587 VIVNAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKN 2646
Query: 70 SQKCSVNPCNIHNGGCAQSCHPGPNGTAECKC--DESTKLVNEGRMCVAKN-ITCDGSKF 126
++ NPC NGGC+ C PGPNG AEC+C + + L N + C+ N C S F
Sbjct: 2647 QKQQCNNPCEQFNGGCSHICAPGPNG-AECQCPHEGNWYLANNRKHCIVDNGERCGASSF 2705
Query: 127 FCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGH-VQITGV--- 182
C NG+CIS W CD D+DCGD SDE + C + P G VQ +
Sbjct: 2706 TCSNGRCISEEWKCDNDNDCGDGSDEMESVCALH---TCSPTAFTCANGRCVQYSYRCDY 2762
Query: 183 -------SQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCT------------------ 217
S G + T M NNR+C EF C
Sbjct: 2763 YNDCGDGSDEAGCLFRDCNATTEFMC--NNRRCIPR-EFICNGVDNCHDNNTSDEKNCPD 2819
Query: 218 ------ENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRC 271
K N CIP+ +LCDGD DC D +DEN T +CS +F C +GRC
Sbjct: 2820 RTCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCT---THTCSSSEFQCASGRC 2876
Query: 272 INTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSD 331
I W CD + DC D SDE C RTC ++EF C +CI + CDG++DCGD SD
Sbjct: 2877 IPQHWYCDQETDCFDASDEPASCGHSERTCLADEFKCDGGRCIPSEWICDGDNDCGDMSD 2936
Query: 332 E 332
E
Sbjct: 2937 E 2937
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 162/339 (47%), Gaps = 39/339 (11%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
V A +PFAIT+ + IYWTD R V + K+ G+N +V P DIHVY
Sbjct: 3402 VYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTH-RPFDIHVYHPY 3460
Query: 70 SQKCSVNPCNIHNGGCAQSCHPGPNG---TAECKCDESTKLVNEGRMCVAKNITCDGSKF 126
Q NPC +NGGC+ C P G T EC D T ++ C+ C ++F
Sbjct: 3461 RQPIVSNPCGTNNGGCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMP---MCSSTQF 3517
Query: 127 FCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQP 185
C N KCI W CDG DC D SDE ++ P G Q + +
Sbjct: 3518 LCANNEKCIPIWWKCDGQKDCSDGSDE-----------LALCPQRFCRLGQFQCSDGN-- 3564
Query: 186 PGIVMVMTTVQTGLMNHPNNRKCDEETEFTCT----ENKAWNRA--QCIPKKWLCDGDPD 239
T+ QT H N +E C ++ W A +CIP+ W CD D
Sbjct: 3565 ------CTSPQTLCNAHQNCPDGSDEDRLLCENHHCDSNEWQCANKRCIPESWQCDTFND 3618
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECHDKY 298
C D +DE+++ +C ++ C P QF C NGRCI W CD DNDCGD SDE +EC
Sbjct: 3619 CEDNSDEDSS--HCASRT-CRPGQFRCANGRCIPQAWKCDVDNDCGDHSDEPIEECMSSA 3675
Query: 299 RTCSS-EEFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNC 335
C + EF+C+ N++CI K C+G DDC D SDE C
Sbjct: 3676 HLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDEQGC 3714
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 145/336 (43%), Gaps = 74/336 (22%)
Query: 12 ISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQ 71
I +PF + + ++++TD +L + R K G M + + +H+ S D
Sbjct: 910 IEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKADGGEMTVIRSGIA---YILHLKSYDVN 966
Query: 72 -KCSVNPCN--IH-NGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNIT------C 121
+ N CN H NG C+ C P PN C C +L + C C
Sbjct: 967 IQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCGCPYGMRLASNHLTCEGDPTNEPPTEQC 1026
Query: 122 DGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITG 181
F C+NG+C+ + CDG DDC DNSDE Q+ G
Sbjct: 1027 GLFSFPCKNGRCVPNYYLCDGVDDCHDNSDE-------------------------QLCG 1061
Query: 182 VSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCV 241
N C + FTC +CIP W CD DCV
Sbjct: 1062 TL---------------------NNTC-SSSAFTC------GHGECIPAHWRCDKRNDCV 1093
Query: 242 DGADENTTALNCPKQS--SCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
DG+DE+ NCP + SC Q++C N +CI+ W+CD DNDCGDGSDE K C+
Sbjct: 1094 DGSDEH----NCPTHAPASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDE-KNCNST-E 1147
Query: 300 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
TC +F C N +CI ++ CDG+ DC D SDE C
Sbjct: 1148 TCQPSQFNCPNHRCIDLSFVCDGDKDCVDGSDEVGC 1183
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 120 TCDGSKFFCRNGK-CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG--VPGH 176
TC C N CI R++ CDGD+DCGDNSDE+P YC S+ G +P H
Sbjct: 2821 TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQH 2880
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW-NRAQCIPKKWLCD 235
+T + + +E TC ++ + +CIP +W+CD
Sbjct: 2881 W--------------YCDQETDCFDASDEPASCGHSERTCLADEFKCDGGRCIPSEWICD 2926
Query: 236 GDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR-----CINTGWLCDHDNDCGDGSDE 290
GD DC D +DE+ C Q+ CS +F C N R CI W+CD D DC DG DE
Sbjct: 2927 GDNDCGDMSDEDKRH-QCQNQN-CSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCTDGYDE 2984
Query: 291 GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCNY 337
+ C RTCS EF C CI K + CD +DCGD SDE C Y
Sbjct: 2985 NQNC--TRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLY 3029
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 110/270 (40%), Gaps = 90/270 (33%)
Query: 102 DESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQI 161
DE + R C+A CDG G+CI W CDGD+DCGD SDED +
Sbjct: 2894 DEPASCGHSERTCLADEFKCDG-------GRCIPSEWICDGDNDCGDMSDEDKRH----- 2941
Query: 162 TGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKA 221
N+ C ++EF C ++
Sbjct: 2942 ----------------------------------------QCQNQNC-SDSEFLCVNDRP 2960
Query: 222 WNRAQCIPKKWLCDGDPDCVDGADENTT---------------ALNCPK----------- 255
+R +CIP+ W+CDGD DC DG DEN L PK
Sbjct: 2961 PDR-RCIPQSWVCDGDVDCTDGYDENQNCTRRTCSENEFTCGYGLCIPKIFRCDRHNDCG 3019
Query: 256 ---------QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEE 305
+C +QF+C NGRCI+ ++CD DNDCGDGSDE CH TC E
Sbjct: 3020 DYSDERGCLYQTCQQNQFTCQNGRCISKTFVCDEDNDCGDGSDELMHLCHTPEPTCPPHE 3079
Query: 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
F C N +CI C+ DDC D SDE C
Sbjct: 3080 FKCDNGRCIEMMKLCNHLDDCLDNSDEKGC 3109
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 108/227 (47%), Gaps = 39/227 (17%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ------ITGVSQPPGELGV 173
TC +F C NG+CI + W CD D+DCGD+SDE C T S +
Sbjct: 3634 TCRPGQFRCANGRCIPQAWKCDVDNDCGDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCI 3693
Query: 174 PGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET-----EFTCTENKAWNRAQCI 228
P GV ++ + + C+E T +F C + CI
Sbjct: 3694 PKWAVCNGVDD--------------CRDNSDEQGCEERTCHPVGDFRCKNH------HCI 3733
Query: 229 PKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGS 288
P +W CDG DC D +DE A P++ C+ +F C N +CI + W+CDH NDCGD S
Sbjct: 3734 PLRWQCDGQNDCGDNSDEENCA---PRE--CTESEFRCVNQQCIPSRWICDHYNDCGDNS 3788
Query: 289 DEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DE ++C + RTC E F C + C+ CDG DC D SDE +C
Sbjct: 3789 DE-RDC--EMRTCHPEYFQCTSGHCVHSELKCDGSADCLDASDEADC 3832
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 107/252 (42%), Gaps = 60/252 (23%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
CD + F C +G CI W CDG DC D++DE + Q G+ +
Sbjct: 28 CDSAHFRCGSGHCIPADWRCDGTKDCSDDADE----IGCAVVTCQQ--------GYFKCQ 75
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLCDG 236
Q V Q + C + T + TC+ QCIP ++ CD
Sbjct: 76 SEGQCIPNSWVCDQDQDCDDGSDERQDCSQSTCSSHQITCSN------GQCIPSEYRCDH 129
Query: 237 DPDCVDGADEN---------------------------------TTALNCPKQSSCSPDQ 263
DC DGADEN + +NC + C ++
Sbjct: 130 VRDCPDGADENDCQYPTCEQLTCDNGACYNTSQKCDWKVDCRDSSDEINCTE--ICLHNE 187
Query: 264 FSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGE 323
FSCGNG CI ++CDHDNDC DGSDE C+ Y TC +F C + +CI + + CDGE
Sbjct: 188 FSCGNGECIPRAYVCDHDNDCQDGSDE-HACN--YPTCGGYQFTCPSGRCIYQNWVCDGE 244
Query: 324 DDCGDRSDEFNC 335
DDC D DE C
Sbjct: 245 DDCKDNGDEDGC 256
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC S+F C N +CI + CDGD DC D SDE N + G+ + +
Sbjct: 1148 TCQPSQFNCPNHRCIDLSFVCDGDKDCVDGSDEVGCVLNCTASQFKCASGDKCIGVTNRC 1207
Query: 180 TGV-------------SQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQ 226
GV ++PPG+ EF C E+
Sbjct: 1208 DGVFDCSDNSDEAGCPTRPPGMC--------------------HSDEFQCQED-----GI 1242
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CIP W CDG PDC+ G+DE+ + PK +C F C NG CI+ WLCD DNDCGD
Sbjct: 1243 CIPNFWECDGHPDCLYGSDEHNACV--PK--TCPSSYFHCDNGNCIHRAWLCDRDNDCGD 1298
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDE 332
SDE K+C + C S ++ C C+ + CDG DC + +DE
Sbjct: 1299 MSDE-KDCPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDE 1344
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDC 284
+C+P +LCDG DC D +DE ++CS F+CG+G CI W CD NDC
Sbjct: 1036 GRCVPNYYLCDGVDDCHDNSDEQLCGT---LNNTCSSSAFTCGHGECIPAHWRCDKRNDC 1092
Query: 285 GDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
DGSDE +C ++ C N +CI K + CD ++DCGD SDE NCN
Sbjct: 1093 VDGSDEHNCPTHAPASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCN 1144
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 212 TEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRC 271
+ FTC+ + CI ++W CD D DC DG+DE + +CSP F+C NGRC
Sbjct: 2703 SSFTCSNGR------CISEEWKCDNDNDCGDGSDEMESVC---ALHTCSPTAFTCANGRC 2753
Query: 272 INTGWLCDHDNDCGDGSDEGKECHDKYRTC-SSEEFACQNFKCIRKTYHCDGEDDCGDR- 329
+ + CD+ NDCGDGSDE C +R C ++ EF C N +CI + + C+G D+C D
Sbjct: 2754 VQYSYRCDYYNDCGDGSDEAG-C--LFRDCNATTEFMCNNRRCIPREFICNGVDNCHDNN 2810
Query: 330 -SDEFNC 335
SDE NC
Sbjct: 2811 TSDEKNC 2817
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 259 CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTY 318
C F+C NGRCI+ W CD+DNDCGDGSDE E TCS F C N +C++ +Y
Sbjct: 2700 CGASSFTCSNGRCISEEWKCDNDNDCGDGSDE-MESVCALHTCSPTAFTCANGRCVQYSY 2758
Query: 319 HCDGEDDCGDRSDEFNCNY 337
CD +DCGD SDE C +
Sbjct: 2759 RCDYYNDCGDGSDEAGCLF 2777
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 100/262 (38%), Gaps = 74/262 (28%)
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDED---PNYCNVQITGVSQPPGELGVPGHVQITGV 182
F C+N CI W CDG +DCGDNSDE+ P C + V
Sbjct: 3725 FRCKNHHCIPLRWQCDGQNDCGDNSDEENCAPRECT-----------------ESEFRCV 3767
Query: 183 SQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLCDGDP 238
+Q + ++ + R C+ T F CT C+ + CDG
Sbjct: 3768 NQQCIPSRWICDHYNDCGDNSDERDCEMRTCHPEYFQCTS------GHCVHSELKCDGSA 3821
Query: 239 DCVDGADENTTALNCPKQSSC--------------------------------------- 259
DC+D +DE P + C
Sbjct: 3822 DCLDASDEADCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLDV 3881
Query: 260 ---SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKY--RTCSSEEFACQNFKCI 314
SP++F C N RCI + +C+ +DCGDG+DE +E K + C+ E+ C N CI
Sbjct: 3882 PCNSPNRFRCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNGHCI 3941
Query: 315 RKTYHCDGEDDCGDRSDEFNCN 336
CD DDCGD SDE CN
Sbjct: 3942 PHDNVCDDADDCGDWSDELGCN 3963
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
M+L+ +P+ I VH +++Y+TD Q + R +K TGAN I + + + R + VY
Sbjct: 1954 MILVHQLSHPWGIAVHDSFLYYTDEQYEVIERVDKATGANKIVLRDNVPNL-RGLQVYHR 2012
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKN 118
+ S N C+ + C Q C P P G C C KL + R C N
Sbjct: 2013 RNAAESSNGCSNNMNACQQICLPVPGGLFSCACATGFKLNPDNRSCSPYN 2062
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 75/194 (38%), Gaps = 30/194 (15%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE--------DPNYCNVQITGVSQPPGEL 171
TC F C +G C+ CDG DC D SDE D YC +
Sbjct: 3797 TCHPEYFQCTSGHCVHSELKCDGSADCLDASDEADCPTRFPDGAYCQATM---------F 3847
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGL---MNHPNNRKCDEETEFTCTENKAWNRAQCI 228
HV I + G L ++ P C+ F C N+ CI
Sbjct: 3848 ECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLDVP----CNSPNRFRCDNNR------CI 3897
Query: 229 PKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGS 288
+C+G DC DG DE P C+ ++ CGNG CI +CD +DCGD S
Sbjct: 3898 YSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNGHCIPHDNVCDDADDCGDWS 3957
Query: 289 DEGKECHDKYRTCS 302
DE K RTC+
Sbjct: 3958 DELGCNKGKERTCA 3971
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 68/179 (37%), Gaps = 56/179 (31%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C ++F C NG+CI R + CD D+DC D SDE + CN G Q
Sbjct: 183 CLHNEFSCGNGECIPRAYVCDHDNDCQDGSDE--HACNYPTCGGYQ-------------- 226
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
FTC + CI + W+CDG+ DC
Sbjct: 227 ---------------------------------FTCPSGR------CIYQNWVCDGEDDC 247
Query: 241 VDGADENTTALNCPKQSSCSPDQFSCG-NGRCINTGWLCDHDNDCGDGSDEGKECHDKY 298
D DE+ CSP ++SC +GRCI+ +CD DC DE KY
Sbjct: 248 KDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENNTSTGKY 306
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 13 SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQK 72
S +PF +++ +++TD V +A K T N ++ + P + VY + Q
Sbjct: 599 SLIPHPFGVSLFEGQVFFTDWTKMAVLKANKFTETNP-QVYYQASLRPYGVTVYHSLRQP 657
Query: 73 CSVNPCNIHNGGCAQSC---HPGPNGTA--ECKCDESTKLVNEGRMCVA 116
+ NPC +NGGC Q C H N CKC +L + R C+A
Sbjct: 658 YATNPCKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDERHCIA 706
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 1 MRIATGASMVLISATIYP--FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLE- 57
+RI S V+ + YP + ITV N I W D L+ +++A K V R
Sbjct: 2261 IRINGENSEVIRYGSRYPTPYGITVFENSIIWVDRNLKKIFQASKEPENTEPPTVIRDNI 2320
Query: 58 DSPRDIHVYSADSQ-----KCSVNPCNIHNGGCAQSCHPGPN-GTAECKCDESTKLVNEG 111
+ RD+ ++ Q + + NPC +NGGC+ C P T +C C T L ++G
Sbjct: 2321 NWLRDVTIFDKQVQPRSPAEVNNNPCLENNGGCSHLCFALPGLHTPKCDCAFGT-LQSDG 2379
Query: 112 RMCV 115
+ C
Sbjct: 2380 KNCA 2383
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P+A+T+ + +YWTD R V RA K G N ++ ++ P I Q SVN
Sbjct: 1644 HPYALTLFEDSVYWTDRATRRVMRANKWHGGNQSVVMYNIQ-WPLGIVAVHPSKQPNSVN 1702
Query: 77 PC 78
PC
Sbjct: 1703 PC 1704
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 185/358 (51%), Gaps = 41/358 (11%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIH-VYSA 68
V++S + F +TV+ YIYWTDL R +YRA K+ G++++ M RL P I V
Sbjct: 2588 VVVSTAFHSFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVVKT 2647
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKC--DESTKLVNEGRMCVAKNIT-CDGSK 125
Q+CS NPC+ NGGC+ C PGPNG AEC+C + + L N+ + CV T C+ +
Sbjct: 2648 QRQQCS-NPCDQFNGGCSHICAPGPNG-AECQCPHEGNWYLANDNKYCVVDTGTRCNQLQ 2705
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQI---TGVSQPPGELGVPGHVQ---- 178
F C NG CI++ W CD D+DCGD SDE P C T + G VP H +
Sbjct: 2706 FTCLNGHCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCGNGRC-VPYHYRCDYY 2764
Query: 179 -------------------ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET--EFTCT 217
T + G + ++ V G+ N +N DE+ TC
Sbjct: 2765 NDCGDNSDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDNDTSDEKNCPPHTCP 2824
Query: 218 EN--KAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCINT 274
+ K C+P+ +LCDGD DC DG+DEN + C +C ++F C + RCI +
Sbjct: 2825 PDFTKCQTTNICVPRAFLCDGDNDCGDGSDEN--PIYCASH-TCRSNEFQCLSPQRCIPS 2881
Query: 275 GWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
W CD + DC DGSDE C TC + +F C N +CI + CDG++DCGD SDE
Sbjct: 2882 YWFCDGEADCADGSDEPDTCGHSVNTCRASQFQCDNGRCISGNWVCDGDNDCGDMSDE 2939
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 158/332 (47%), Gaps = 39/332 (11%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA+T+ + ++WTD R V + K+ G+ + +V P DIHVY Q N
Sbjct: 3411 HPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTH-KPFDIHVYHPYRQPIMSN 3469
Query: 77 PCNIHNGGCAQSCHPGPNG---TAECKCDESTKLVNEGRMCVAKNITCDGSKFFC-RNGK 132
PC +NGGC+ C G T C D T + + +C+ C ++F C N K
Sbjct: 3470 PCGTNNGGCSHLCLIKAGGRGFTCACPDDFQTVQLRDRTLCMP---MCSSTQFLCGNNEK 3526
Query: 133 CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVM 192
CI W CDG DC D SDE P+ C + + Q G + P +
Sbjct: 3527 CIPIWWKCDGQKDCSDGSDE-PDLCPHRFCRLGQFQCRDG--------NCTSPQALCNAR 3577
Query: 193 TTVQTG------LMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE 246
G L H +C E E+ C + CIP+ W CD DC+D +DE
Sbjct: 3578 QDCADGSDEDRVLCEH---HRC-ESNEWQCANKR------CIPQSWQCDSVNDCLDNSDE 3627
Query: 247 NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECHDKYRTCSSE- 304
+T+ +C ++ C P QF C NGRCI W CD DNDCGD SDE EC C +
Sbjct: 3628 DTS--HCASRT-CRPGQFKCNNGRCIPQSWKCDVDNDCGDYSDEPIDECTTAAYNCDNHT 3684
Query: 305 EFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNC 335
EF+C+ N++CI + C+G DDC D SDE C
Sbjct: 3685 EFSCKTNYRCIPQWAVCNGFDDCRDNSDEQGC 3716
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 149/335 (44%), Gaps = 31/335 (9%)
Query: 12 ISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQ 71
+ +PF +TV ++ ++ TD +L + R K G +M +++R S + Y AD Q
Sbjct: 909 VDQMTHPFGLTVFKDNVFITDWRLGAIIRVRKSDGGDMT-VIRRGISSVMHVKAYDADLQ 967
Query: 72 KCSVNPCNI---HNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA------KNITCD 122
S N C+ NG C+ C P PN C C KL + C C
Sbjct: 968 TGS-NYCSQTTHANGDCSHFCFPVPNFQRVCGCPYGMKLQRDQMTCEGDPAREPPTQQCG 1026
Query: 123 GSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGV 182
F C NGKC+ + CDG DDC DNSDE + C V P V G I G
Sbjct: 1027 SLSFPCNNGKCVPSFFRCDGVDDCHDNSDE--HQCGV-FNNTCSPSAFACVRGGQCIPGQ 1083
Query: 183 SQPPGIVMVMT-TVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCV 241
+ + + H + C T FTC + CIPK W+CD D DC
Sbjct: 1084 WHCDRQNDCLDGSDEQNCPTHATSSTC-PSTSFTC------DNHVCIPKDWVCDTDNDCS 1136
Query: 242 DGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTC 301
DG+DE NC +C P QF C + RCI+ ++CD D DC DGSDE C
Sbjct: 1137 DGSDEK----NCQASGTCQPTQFRCPDHRCISPLYVCDGDKDCADGSDEAG----CVLNC 1188
Query: 302 SSEEFACQN-FKCIRKTYHCDGEDDCGDRSDEFNC 335
+S +F C + CI Y CDG DC D SDE C
Sbjct: 1189 TSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGC 1223
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 108/252 (42%), Gaps = 83/252 (32%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC S+F C NG+CIS W CDGD+DCGD SDED + H ++
Sbjct: 2907 TCRASQFQCDNGRCISGNWVCDGDNDCGDMSDEDQRH-------------------HCEL 2947
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
S T+FTC ++ NR +CIP+ W+CDGD D
Sbjct: 2948 QNCS---------------------------STQFTCVNSRPPNR-RCIPQYWVCDGDAD 2979
Query: 240 CVDGADE--NTTALNCP------------KQS---------------------SCSPDQF 264
C D DE N T C +QS C +QF
Sbjct: 2980 CSDALDELQNCTMRTCSAGEFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYPPCHANQF 3039
Query: 265 SCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEEFACQNFKCIRKTYHCDGE 323
+C NGRCI ++CD DNDCGDGSDE + CH TC +F C N CI C+
Sbjct: 3040 TCQNGRCIPRFFVCDEDNDCGDGSDEQEHLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHV 3099
Query: 324 DDCGDRSDEFNC 335
DDC D SDE C
Sbjct: 3100 DDCSDNSDEKGC 3111
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC ++F C + +CIS ++ CDGD DC D SDE N G + +
Sbjct: 1149 TCQPTQFRCPDHRCISPLYVCDGDKDCADGSDEAGCVLNCTSAQFKCADGSSCINSRYRC 1208
Query: 180 TGV-------------SQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQ 226
GV ++PPG M HP+ EF C +
Sbjct: 1209 DGVYDCRDNSDEAGCPTRPPG------------MCHPD--------EFQCQGD-----GT 1243
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CIP W CDG PDC+ G+DE+T + PK +CSP F C NG CI W+CD DNDC D
Sbjct: 1244 CIPNTWECDGHPDCIHGSDEHTGCV--PK--TCSPTHFLCDNGNCIYKAWICDGDNDCRD 1299
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDE 332
SDE K+C + C S ++ C + CI + CDG DC + +DE
Sbjct: 1300 MSDE-KDCPTQPFHCPSTQWQCPGYSTCINLSALCDGVFDCPNGTDE 1345
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQI------TGVSQPPGELGV 173
TC +F C NG+CI + W CD D+DCGD SDE + C T S +
Sbjct: 3636 TCRPGQFKCNNGRCIPQSWKCDVDNDCGDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCI 3695
Query: 174 PGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWL 233
P G + + G + P C +F C + CIP +W
Sbjct: 3696 PQWAVCNGFDD-----CRDNSDEQGCESVP----CHPSGDFRCANH------HCIPLRWK 3740
Query: 234 CDGDPDCVDGADENTTALNC-PKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK 292
CDG DC D +DE NC P++ CS +F C + +CI + W+CD +NDCGD SDE +
Sbjct: 3741 CDGTDDCGDNSDEE----NCVPRE--CSESEFRCADQQCIPSRWVCDQENDCGDNSDE-R 3793
Query: 293 ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+C + +TC E F C + C+ K CDG DC D SDE C
Sbjct: 3794 DC--EMKTCHPEHFQCTSGHCVPKALACDGRADCLDASDESAC 3834
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN---VQITGVSQPPGELGVP 174
C S+F C + +CI W CD ++DCGDNSDE + C+ Q T P L
Sbjct: 3761 CSESEFRCADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALACD 3820
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLC 234
G S PN C F C + CI W+C
Sbjct: 3821 GRADCLDASDESACPT----------RFPNGTYC-PAAMFECKNHV------CIQSFWIC 3863
Query: 235 DGDPDCVDGADENT-TALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE 293
DG+ DCVDG+DE N P +S P +F C N RC+ LC+ +DCGDGSDE +E
Sbjct: 3864 DGENDCVDGSDEEIHLCFNIPCES---PQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEE 3920
Query: 294 CHDK--YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
K ++ C+ E+ C N CI + Y CD +DCGD SDE CN
Sbjct: 3921 HCRKPTHKPCTDTEYKCSNGNCISQHYVCDNVNDCGDLSDETGCN 3965
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 120 TCDGSKFFC-RNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG--VPGH 176
+C+ F C G CI W CD D DC D +DE N C Q G +P
Sbjct: 66 SCESGLFLCPAEGTCIPSSWVCDEDKDCSDGADEQQN-CAGTTCSAQQMTCSNGQCIPSE 124
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET--EFTCTENKAWNRAQCIPKKWLC 234
+ VS P + + R C T + TC +N +Q C
Sbjct: 125 YRCDHVSDCP--------------DGSDERNCHYPTCDQLTCANGACYNTSQ------RC 164
Query: 235 DGDPDCVDGADE-NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE 293
D DC D +DE N T L CS +F CG+G CI ++CDHDNDC D SDE +
Sbjct: 165 DQKVDCRDSSDEANCTTL-------CSQKEFECGSGECILRAYVCDHDNDCEDNSDE-RN 216
Query: 294 CHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C+ Y TC +F C N +CI + + CDG+DDC D DE C
Sbjct: 217 CN--YDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGC 256
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 99/251 (39%), Gaps = 93/251 (37%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C F C NG CI W CDG DC D++DE
Sbjct: 28 CGSGNFRCDNGYCIPASWRCDGTRDCLDDTDE---------------------------- 59
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+ PP R C E F C CIP W+CD D DC
Sbjct: 60 -IGCPP-------------------RSC-ESGLFLCPA-----EGTCIPSSWVCDEDKDC 93
Query: 241 VDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDK--- 297
DGADE NC ++CS Q +C NG+CI + + CDH +DC DGSDE + CH
Sbjct: 94 SDGADEQQ---NCAG-TTCSAQQMTCSNGQCIPSEYRCDHVSDCPDGSDE-RNCHYPTCD 148
Query: 298 ---------YRT----------------------CSSEEFACQNFKCIRKTYHCDGEDDC 326
Y T CS +EF C + +CI + Y CD ++DC
Sbjct: 149 QLTCANGACYNTSQRCDQKVDCRDSSDEANCTTLCSQKEFECGSGECILRAYVCDHDNDC 208
Query: 327 GDRSDEFNCNY 337
D SDE NCNY
Sbjct: 209 EDNSDERNCNY 219
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
+ +FTC CI + W CD D DC DG+DE T +C F+CGNGR
Sbjct: 2703 QLQFTCLN------GHCINQDWKCDNDNDCGDGSDELPTVC---AFHTCRSTAFTCGNGR 2753
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTC-SSEEFACQNFKCIRKTYHCDGEDDC--G 327
C+ + CD+ NDCGD SDE C +R C S+ EF C N +CI +Y C+G ++C
Sbjct: 2754 CVPYHYRCDYYNDCGDNSDEAG-C--LFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDN 2810
Query: 328 DRSDEFNC 335
D SDE NC
Sbjct: 2811 DTSDEKNC 2818
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRK 316
+ C+ QF+C NG CIN W CD+DNDCGDGSDE + TC S F C N +C+
Sbjct: 2699 TRCNQLQFTCLNGHCINQDWKCDNDNDCGDGSDELPTVC-AFHTCRSTAFTCGNGRCVPY 2757
Query: 317 TYHCDGEDDCGDRSDEFNCNY 337
Y CD +DCGD SDE C +
Sbjct: 2758 HYRCDYYNDCGDNSDEAGCLF 2778
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 57/171 (33%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C +F C +G+CI R + CD D+DC DNSDE CN G GH
Sbjct: 183 CSQKEFECGSGECILRAYVCDHDNDCEDNSDE--RNCNYDTCG-----------GH---- 225
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+FTC+ QCI + W+CDGD DC
Sbjct: 226 --------------------------------QFTCSN------GQCINQNWVCDGDDDC 247
Query: 241 VDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDCGDGSDE 290
D DE+ N C P +++C G+GRCI+ +CD DC +G DE
Sbjct: 248 QDSGDEDGCESN-QSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDDE 297
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 3 IATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRD 62
+A G S+V +PF I++ ++++TD V +A K T N ++ + P
Sbjct: 593 VARGGSLV-----PHPFGISLFEEHVFFTDWTKMAVMKASKFTETNP-QVYHQSSLRPHG 646
Query: 63 IHVYSADSQKCSVNPCNIHNGGCAQSC---HPGPNGTA--ECKCDESTKLVNEGRMCVA- 116
+ VY A Q + NPC +NGGCAQ C H NG CKC+ +L ++ CVA
Sbjct: 647 VTVYHALRQPNATNPCGSNNGGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHRCVAV 706
Query: 117 KNITCDGSKFFCR 129
KN SK R
Sbjct: 707 KNFLLFSSKTAVR 719
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
M+L+ +P+ + V+ +++Y++D Q + R +K +G N + + + R + VY
Sbjct: 1955 MILVHHLAHPWGLVVYGSFLYYSDEQYEVIERVDKSSGNNKVVLRDNVP-YLRGLRVYHR 2013
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKN 118
+ S N C+ + C Q C P P G C C KL +GR C N
Sbjct: 2014 RNAADSSNGCSNNPNACQQICLPVPGGMFSCACASGFKLSPDGRSCSPYN 2063
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 1 MRIATGASMVLISATIYP--FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLE- 57
+ + G S V+ + YP + ITV I W D L+ V++A K G +V R +
Sbjct: 2262 IHLDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLKKVFQASKQPGNTDPPVVIRDKI 2321
Query: 58 DSPRDIHVYSADSQKCSV-----NPCNIHNGGCAQSCHPGPN-GTAECKCDESTKLVNEG 111
+ RD+ ++ +Q S NPC NGGC+ C P T C C T L N+G
Sbjct: 2322 NLLRDVTIFDEHAQPLSPAELNNNPCLQSNGGCSHFCFALPELPTPRCGCAFGT-LGNDG 2380
Query: 112 RMCVA 116
+ C
Sbjct: 2381 KSCAT 2385
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P A+T+ +++YWTD R V +A K G N +V P I Q S N
Sbjct: 1645 HPHALTLFEDFVYWTDRGTRQVMQANKWHGGNQ-SVVMYSVHQPLGITAIHPSRQPPSRN 1703
Query: 77 PC 78
PC
Sbjct: 1704 PC 1705
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+S C+ + C+ NGGC C GP G A C C +L N+ + C
Sbjct: 1345 ESPLCNQDSCSHFNGGCTHQCMQGPFG-ATCLCPLGYQLANDTKTC 1389
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 187/362 (51%), Gaps = 51/362 (14%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
+VL + FA+T+ +Y+YWTD + + + RA K TGAN ++ L P D+HV+ A
Sbjct: 3226 VVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGANKTLLISTLH-RPMDLHVFHA 3284
Query: 69 DSQKCSVN-PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFF 127
Q N PC ++NGGC+ C P G +C C + L +GR CV+ C S+F
Sbjct: 3285 LRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLGGDGRTCVSN---CTASQFV 3341
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ--------ITGVSQPPG---------- 169
C+N KCI W CD +DDCGD+SDE P+ + TG+ P
Sbjct: 3342 CKNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQ 3401
Query: 170 ----------ELGVPGHVQITGVSQ-PPGIVMVMTTVQTGLMNHPNNRKCDEET----EF 214
+ +P + T ++ PGI G + + R C E T +F
Sbjct: 3402 DNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--DGEDERDCPEVTCAPNQF 3459
Query: 215 TCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCIN 273
C+ K +CIP+ W+CD D DCVDG+DE NC Q +C D+F C + GRCI
Sbjct: 3460 QCSITK-----RCIPRVWVCDRDNDCVDGSDE---PANC-TQMTCGVDEFRCKDSGRCIP 3510
Query: 274 TGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEF 333
W CD ++DCGDGSDE KE D+ RTC +F C+N +C+ + CD ++DCGD SDE
Sbjct: 3511 ARWKCDGEDDCGDGSDEPKEECDE-RTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEE 3569
Query: 334 NC 335
+C
Sbjct: 3570 SC 3571
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 153/329 (46%), Gaps = 67/329 (20%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHT-GANMIEMVKRLEDSP-RDIHVYSADSQKCS 74
+ F + H NY++WT+ + VYR E+ GA + R E P +I +Y A Q+
Sbjct: 745 HAFGLCHHGNYLFWTEYRSGSVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAQQQQVG 804
Query: 75 VNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNI-----TCDGSKFFCR 129
N C ++NGGC+ C P G+ +C C E L +G C+A C +F C
Sbjct: 805 TNKCRVNNGGCSSLCLATP-GSRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACA 863
Query: 130 NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIV 189
N +CI W CDGD+DC DNSDE P C+
Sbjct: 864 NNRCIQERWKCDGDNDCLDNSDEAPALCHQHTC--------------------------- 896
Query: 190 MVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTT 249
P++R F C N+ CIP +WLCDGD DC + DE+
Sbjct: 897 -------------PSDR-------FKCENNR------CIPNRWLCDGDNDCGNSEDESNA 930
Query: 250 ALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS-EEFAC 308
+ +C P+QFSC +GRCI W CD D+DCGD SDE C Y TC +F C
Sbjct: 931 TCS---ARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASC--AYPTCFPLTQFTC 985
Query: 309 QNFKCIRKTYHCDGEDDCGDRSDEFNCNY 337
N +CI + CD ++DCGD SDE C++
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAGCSH 1014
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 147/336 (43%), Gaps = 25/336 (7%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
++L S ++PF + V+ +I+WTD R V RA K+ G++M + + P I +
Sbjct: 2414 VILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKYVGSDMKLLRVDIPQQPMGIIAVAN 2473
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGS-KFF 127
D+ C ++PC I+NGGC C G C C +++ E C A N +C +F
Sbjct: 2474 DTNSCELSPCRINNGGCQDLCLLTHQGHVNCSC-RGGRILQEDFTCRAVNSSCRAQDEFE 2532
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ--ITGVSQPPGELGVPGHVQITGVSQP 185
C NG+CIS +CDG C D SDE P+YCN + Q V + GV
Sbjct: 2533 CANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCNNGRCVSNMLWCNGVDD- 2591
Query: 186 PGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGAD 245
G P N+ EF C + CI C+ DC D +D
Sbjct: 2592 ---------CGDGSDEIPCNKTACGVGEFRCRD------GSCIGNSSRCNQFVDCEDASD 2636
Query: 246 E-NTTALNCPKQSSCSPD----QFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRT 300
E N +A +C Q C W+CD NDCGD SDE K
Sbjct: 2637 EMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPR 2696
Query: 301 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C FAC + +CI ++ CD EDDC + DE +CN
Sbjct: 2697 CPLNYFACPSGRCIPMSWTCDKEDDCENGEDETHCN 2732
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 104/217 (47%), Gaps = 59/217 (27%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPG-H 176
N C ++F C+N +CIS+ W CDG DDCGD SDE +C + G P PG H
Sbjct: 2732 NKFCSEAQFECQNHRCISKQWLCDGSDDCGDGSDE-AAHCEGKTCG----PSSFSCPGTH 2786
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
V C+P++WLCDG
Sbjct: 2787 V-------------------------------------------------CVPERWLCDG 2797
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC DGADE+ TA C S+C +F C N CI ++CDHD DC DGSDE EC
Sbjct: 2798 DKDCTDGADESVTA-GCLYNSTCDDREFMCQNRLCIPKHFVCDHDRDCADGSDESPEC-- 2854
Query: 297 KYRTCSSEEFACQNFKCI-RKTYHCDGEDDCGDRSDE 332
+Y TC EF C N +C+ + + CDGE+DC D SDE
Sbjct: 2855 EYPTCGPNEFRCANGRCLSSRQWECDGENDCHDHSDE 2891
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 119 ITCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP--PGELGVPG 175
+TC +F C++ G+CI W CDG+DDCGD SDE C+ + Q VPG
Sbjct: 3493 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPG 3552
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCD----EETEFTCTENKAWNRAQCIPKK 231
Q ++ + C E+EF+C + CI +
Sbjct: 3553 RWQCD--------------YDNDCGDNSDEESCTPRPCSESEFSCANGR------CIAGR 3592
Query: 232 WLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG 291
W CDGD DC DG+DE +C + C DQF C +G CI W CD D DC DGSDE
Sbjct: 3593 WKCDGDHDCADGSDEK----DCTPR--CDMDQFQCKSGHCIPLRWRCDADADCMDGSDE- 3645
Query: 292 KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+ C RTC +EF C N C + CDGEDDCGD SDE
Sbjct: 3646 EACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDE 3686
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 108/225 (48%), Gaps = 36/225 (16%)
Query: 119 ITCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQ---PPGELGVP 174
+TC ++F C +CI R+W CD D+DC D SDE P C GV + +P
Sbjct: 3452 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDE-PANCTQMTCGVDEFRCKDSGRCIP 3510
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPK 230
+ G G + +CDE T +F C N+ C+P
Sbjct: 3511 ARWKCDGEDD------------CGDGSDEPKEECDERTCEPYQFRCKNNR------CVPG 3552
Query: 231 KWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
+W CD D DC D +DE + P+ CS +FSC NGRCI W CD D+DC DGSDE
Sbjct: 3553 RWQCDYDNDCGDNSDEESCT---PR--PCSESEFSCANGRCIAGRWKCDGDHDCADGSDE 3607
Query: 291 GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
K+C + C ++F C++ CI + CD + DC D SDE C
Sbjct: 3608 -KDCTPR---CDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEAC 3648
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED---PNYCNVQITGVSQPPGELGVPGH 176
TC+ +F C+N +C+ W CD D+DCGDNSDE+ P C+ E
Sbjct: 3536 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCS---------ESEFSCANG 3586
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
I G + G G +CD + +F C CIP +W CD
Sbjct: 3587 RCIAGRWKCDGD----HDCADGSDEKDCTPRCDMD-QFQCKS------GHCIPLRWRCDA 3635
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC+DG+DE +C D+F C N C W CD ++DCGD SDE E
Sbjct: 3636 DADCMDGSDEEACGTGV---RTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECA 3692
Query: 297 KYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
++ + F C+N + C+ CDG D+CGD +DE +C
Sbjct: 3693 RFICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDC 3732
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 96/217 (44%), Gaps = 56/217 (25%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C +G+CI W+CDGD+DCGD SDE C Q T +PPG
Sbjct: 1015 SCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQAT---RPPGGC-------- 1063
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
EF C + CIP +W CDGD D
Sbjct: 1064 ------------------------------HSDEFQCRLD-----GLCIPLRWRCDGDTD 1088
Query: 240 CVDGADENTTALNCPKQSSCSPD-QFSCGN-GRCINTGWLCDHDNDCGDGSDEGKECHDK 297
C+D +DE + C P+ +F C + RCI+ W+CD D+DC D SDE + C +
Sbjct: 1089 CMDSSDEKSCE---GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDE-ENC--E 1142
Query: 298 YRTCSSEEFACQNFK--CIRKTYHCDGEDDCGDRSDE 332
C C N C+ CDG+DDCGD SDE
Sbjct: 1143 ALACRPPSHPCANNTSVCLPPDKLCDGKDDCGDGSDE 1179
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C S+F C NG+CI+ W CDGD DC D SDE + G +P
Sbjct: 3576 CSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHC-IP------ 3628
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+ M+ + C + N C P W CDG+ DC
Sbjct: 3629 --------LRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDC 3680
Query: 241 VDGADENTTALNCPKQSSCSPDQ-FSCGNGR-CINTGWLCDHDNDCGDGSDE-------- 290
D +DEN + C P++ F C N R C+ G CD ++CGDG+DE
Sbjct: 3681 GDNSDENPEEC---ARFICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDCEPPTA 3737
Query: 291 -GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C DK +EF C+N +C+ + C+ DDCGD SDE +C+
Sbjct: 3738 QNPHCKDK------KEFLCRNQRCLSSSLRCNMFDDCGDGSDEEDCS 3778
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRK 316
S+C+ QF C N +CI W CD ++DCGD SDE +C + C +F C C
Sbjct: 3333 SNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDEPPDCPE--FKCRPGQFQCSTGICTNP 3390
Query: 317 TYHCDGEDDCGDRSDEFNCN 336
+ CDG++DC D SDE NC+
Sbjct: 3391 AFICDGDNDCQDNSDEANCD 3410
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA+T++ +YWTD + + +A K TG N + +V+R P D+ VY Q + N
Sbjct: 1481 HPFAVTLYGGEVYWTDWRTNTLAKANKWTGHN-VTVVQRTNTQPFDLQVYHPSRQPMAPN 1539
Query: 77 PC--NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
PC N G C+ C N T C C KL + C
Sbjct: 1540 PCEANGGRGPCSHLCLINYNRTVSCACPHLMKLHKDNTTC 1579
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 223 NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHD 281
++ CI K W CDG+ DC DG+DE K C P++ SC G C+ LC+
Sbjct: 37 DQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCVPMSRLCNGI 96
Query: 282 NDCGDGSDEGKECHDKYRTCSSEEFACQN 310
DC DGSDEG C + CS CQ+
Sbjct: 97 QDCMDGSDEGAHCRELRANCS--RMGCQH 123
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 78/199 (39%), Gaps = 54/199 (27%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC +F C N C W CDG+DDCGDNSDE+P C I PP
Sbjct: 3654 TCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECARFIC----PP----------- 3698
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
N P F C ++ C+ CDG +
Sbjct: 3699 ---------------------NRP----------FRCKNDRV-----CLWIGRQCDGVDN 3722
Query: 240 CVDGADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD-K 297
C DG DE + C +F C N RC+++ C+ +DCGDGSDE D K
Sbjct: 3723 CGDGTDEEDCEPPTAQNPHCKDKKEFLCRNQRCLSSSLRCNMFDDCGDGSDEEDCSIDPK 3782
Query: 298 YRTCSSEEFACQN-FKCIR 315
+C++ C + +C+R
Sbjct: 3783 LTSCATNASMCGDEARCVR 3801
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 249 TALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKEC--HDKYRTCSSEE 305
++ PK +CSP QF+C + CI+ GW CD + DC DGSDE E K + C E
Sbjct: 20 ATMDAPK--TCSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNE 77
Query: 306 FACQNFK-CIRKTYHCDGEDDCGDRSDE 332
+C + C+ + C+G DC D SDE
Sbjct: 78 HSCLGTELCVPMSRLCNGIQDCMDGSDE 105
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 67/178 (37%), Gaps = 73/178 (41%)
Query: 110 EGRMCVAKNITCDGSK---------------------FFCRNGKCI-SRMWSCDGDDDCG 147
+ R+C+ K+ CD + F C NG+C+ SR W CDG++DC
Sbjct: 2827 QNRLCIPKHFVCDHDRDCADGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH 2886
Query: 148 DNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRK 207
D+SDE P N T P H K
Sbjct: 2887 DHSDEAPK--NPHCTS----------PEH------------------------------K 2904
Query: 208 CDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALN---CPKQSSCSPD 262
C+ ++F C+ + C+ + LC+G DC DG+DE +N K S CS D
Sbjct: 2905 CNASSQFLCSSGR------CVAEALLCNGQDDCGDGSDERGCHVNECLSRKLSGCSQD 2956
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLR--GVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66
+VL S + F+++V ++IYW+D + R K + + + + +DI V+
Sbjct: 2090 VVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIGVQLKDIKVF 2149
Query: 67 SADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+ D QK N C + NGGC Q C G C C L +G C
Sbjct: 2150 NRDRQK-GTNVCAVANGGCQQLCLYRGGGQRACACAHGM-LAEDGASC 2195
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 52/143 (36%), Gaps = 52/143 (36%)
Query: 105 TKLVNEGRMCVAKNITCDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITG 163
+ LV+ M K TC +F CR+ CIS+ W CDG+ DC D SDE P C Q
Sbjct: 14 SALVSGATMDAPK--TCSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEIC-PQSKA 70
Query: 164 VSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN 223
PP E G TE
Sbjct: 71 QRCPPNEHSCLG------------------------------------TEL--------- 85
Query: 224 RAQCIPKKWLCDGDPDCVDGADE 246
C+P LC+G DC+DG+DE
Sbjct: 86 ---CVPMSRLCNGIQDCMDGSDE 105
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF+I V +YIY V++ K + +I + L + D+ +Y Q N
Sbjct: 4092 HPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLINLTGGLSHA-SDVVLYHQHKQPEVTN 4150
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVN 109
PC+ C C P+G C C +L N
Sbjct: 4151 PCDRKK--CEWLCLLSPSGPV-CTCPNGKRLDN 4180
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 20 AITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY--SADSQKCSVNP 77
A+ + + ++W D + K G+ + +++ + VY S + NP
Sbjct: 1792 ALAIMGDKLWWADQVSEKMGTCNKADGSGSV-VLRNSTTLVMHMKVYDESIQLEHEGTNP 1850
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
C+++NG C+Q C P T C C L + + C
Sbjct: 1851 CSVNNGDCSQLCLPTSETTRSCMCTAGYSLRSGQQAC 1887
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 187/362 (51%), Gaps = 51/362 (14%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
+VL + FA+T+ +Y+YWTD + + + RA K TG N ++ L P D+HV+ A
Sbjct: 3225 VVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGTNKTLLISTLH-RPMDLHVFHA 3283
Query: 69 DSQKCSVN-PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFF 127
Q N PC ++NGGC+ C P G +C C + L ++GR CV+ C S+F
Sbjct: 3284 LRQPDVPNHPCKVNNGGCSNLCLLSPGGGHKCACPTNFYLGSDGRTCVSN---CTASQFV 3340
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ--------ITGVSQPPG---------- 169
C+N KCI W CD +DDCGD+SDE P+ + TG+ P
Sbjct: 3341 CKNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQ 3400
Query: 170 ----------ELGVPGHVQITGVSQ-PPGIVMVMTTVQTGLMNHPNNRKCDEET----EF 214
+ +P + T ++ PGI G + + R C E T +F
Sbjct: 3401 DNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--DGEDERDCPEVTCAPNQF 3458
Query: 215 TCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCIN 273
C+ K +CIP+ W+CD D DCVDG+DE NC Q +C D+F C + GRCI
Sbjct: 3459 QCSITK-----RCIPRVWVCDRDNDCVDGSDE---PANC-TQMTCGVDEFRCKDSGRCIP 3509
Query: 274 TGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEF 333
W CD ++DCGDGSDE KE D+ RTC +F C+N +C+ + CD ++DCGD SDE
Sbjct: 3510 ARWKCDGEDDCGDGSDEPKEECDE-RTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEE 3568
Query: 334 NC 335
+C
Sbjct: 3569 SC 3570
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 159/331 (48%), Gaps = 35/331 (10%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGAN--MIEMVKRLEDSPRDIHVYSADSQKCS 74
+ F + H NY++WT+ + VYR E+ G + +++ +I +Y A Q+
Sbjct: 744 HAFGLCHHGNYLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVG 803
Query: 75 VNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNI-----TCDGSKFFCR 129
N C ++NGGC+ C P G+ +C C E L +G C+A C +F C
Sbjct: 804 TNKCRVNNGGCSSLCLATP-GSRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACA 862
Query: 130 NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIV 189
N +CI W CDGD+DC DNSDE P C+ P + I P
Sbjct: 863 NSRCIQERWKCDGDNDCLDNSDEAPALCHQHTC----PSDRFKCENNRCI------PNRW 912
Query: 190 MVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGAD 245
+ G +N C T +F+C + CIP W CD D DC D +D
Sbjct: 913 LCDGDNDCGNSEDESNATCSARTCPPNQFSCASGR------CIPISWTCDLDDDCGDRSD 966
Query: 246 ENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEE 305
E+ + C + QF+C NGRCIN W CD+DNDCGD SDE H +CSS +
Sbjct: 967 ESAS---CAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSH----SCSSTQ 1019
Query: 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
F C + +CI + + CDG++DCGD SDE + N
Sbjct: 1020 FKCNSGRCIPEHWTCDGDNDCGDYSDETHAN 1050
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 145/336 (43%), Gaps = 25/336 (7%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
++L S ++PF + V+ +I+WTD R V RA KH G+NM + + P I +
Sbjct: 2413 VILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKHVGSNMKLLRVDIPQQPMGIIAVAN 2472
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGS-KFF 127
D+ C ++PC I+NGGC C G C C +++ + C A N +C +F
Sbjct: 2473 DTNSCELSPCRINNGGCQDLCLLTHQGHVNCSC-RGGRILQDDLTCRAVNSSCRAQDEFE 2531
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ--ITGVSQPPGELGVPGHVQITGVSQP 185
C NG+CI+ +CDG C D SDE P+YCN + Q V + G
Sbjct: 2532 CANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSNGRCVSNMLWCNGADD- 2590
Query: 186 PGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGAD 245
G P N+ EF C + CI C+ DC D +D
Sbjct: 2591 ---------CGDGSDEIPCNKTACGVGEFRCRD------GTCIGNSSRCNQFVDCEDASD 2635
Query: 246 E-NTTALNCPKQSSCSPD----QFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRT 300
E N +A +C Q C W+CD NDCGD SDE K
Sbjct: 2636 EMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPR 2695
Query: 301 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C FAC + +CI ++ CD EDDC DE +CN
Sbjct: 2696 CPLNYFACPSGRCIPMSWTCDKEDDCEHGEDETHCN 2731
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 105/217 (48%), Gaps = 59/217 (27%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPG-H 176
N C ++F C+N +CIS+ W CDG DDCGD SDE +C + G P PG H
Sbjct: 2731 NKFCSEAQFECQNHRCISKQWLCDGSDDCGDGSDE-AAHCEGKTCG----PSSFSCPGTH 2785
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
V C+P++WLCDG
Sbjct: 2786 V-------------------------------------------------CVPERWLCDG 2796
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC DGADE+ A C S+C +F C N +CI ++CDHD DC DGSDE EC
Sbjct: 2797 DKDCADGADESIAA-GCLYNSTCDDREFMCQNRQCIPKHFVCDHDRDCADGSDESPEC-- 2853
Query: 297 KYRTCSSEEFACQNFKCI-RKTYHCDGEDDCGDRSDE 332
+Y TC EF C N +C+ + + CDGE+DC D+SDE
Sbjct: 2854 EYPTCGPSEFRCANGRCLSSRQWECDGENDCHDQSDE 2890
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 119 ITCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP--PGELGVPG 175
+TC +F C++ G+CI W CDG+DDCGD SDE C+ + Q VPG
Sbjct: 3492 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPG 3551
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCD----EETEFTCTENKAWNRAQCIPKK 231
Q ++ + C E+EF+C + CI +
Sbjct: 3552 RWQCD--------------YDNDCGDNSDEESCTPRPCSESEFSCANGR------CIAGR 3591
Query: 232 WLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG 291
W CDGD DC DG+DE +C + C DQF C +G CI W CD D DC DGSDE
Sbjct: 3592 WKCDGDHDCADGSDEK----DCTPR--CDMDQFQCKSGHCIPLRWRCDADADCMDGSDE- 3644
Query: 292 KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+ C RTC +EF C N C + CDGEDDCGD SDE
Sbjct: 3645 EACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDE 3685
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 108/225 (48%), Gaps = 36/225 (16%)
Query: 119 ITCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQ---PPGELGVP 174
+TC ++F C +CI R+W CD D+DC D SDE P C GV + +P
Sbjct: 3451 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDE-PANCTQMTCGVDEFRCKDSGRCIP 3509
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPK 230
+ G G + +CDE T +F C N+ C+P
Sbjct: 3510 ARWKCDGEDD------------CGDGSDEPKEECDERTCEPYQFRCKNNR------CVPG 3551
Query: 231 KWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
+W CD D DC D +DE + P+ CS +FSC NGRCI W CD D+DC DGSDE
Sbjct: 3552 RWQCDYDNDCGDNSDEESCT---PR--PCSESEFSCANGRCIAGRWKCDGDHDCADGSDE 3606
Query: 291 GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
K+C + C ++F C++ CI + CD + DC D SDE C
Sbjct: 3607 -KDCTPR---CDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEAC 3647
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED---PNYCNVQITGVSQPPGELGVPGH 176
TC+ +F C+N +C+ W CD D+DCGDNSDE+ P C+ E
Sbjct: 3535 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCS---------ESEFSCANG 3585
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
I G + G G +CD + +F C CIP +W CD
Sbjct: 3586 RCIAGRWKCDGD----HDCADGSDEKDCTPRCDMD-QFQCKS------GHCIPLRWRCDA 3634
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC+DG+DE +C D+F C N C W CD ++DCGD SDE E
Sbjct: 3635 DADCMDGSDEEACGTGV---RTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECA 3691
Query: 297 KYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
++ + F C+N + C+ CDG D+CGD +DE +C
Sbjct: 3692 RFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDC 3731
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 92/215 (42%), Gaps = 52/215 (24%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C +G+CI W+CDGD+DCGD SDE C Q T +PPG
Sbjct: 1014 SCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQAT---RPPGGC-------- 1062
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
EF C + CIP +W CDGD D
Sbjct: 1063 ------------------------------HTDEFQCRLD-----GLCIPLRWRCDGDTD 1087
Query: 240 CVDGADENTTALNCPKQSSCSPD-QFSCGN-GRCINTGWLCDHDNDCGDGSDEGKECHDK 297
C+D +DE + C P +F C + RCI+ W+CD DNDC D SDE + C
Sbjct: 1088 CMDSSDEKSCE---GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCEDNSDE-ENCESL 1143
Query: 298 YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
S A C+ CDG DDCGD SDE
Sbjct: 1144 ACRPPSHPCANNTSVCLPPDKLCDGNDDCGDGSDE 1178
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED-------PNYCNVQITGVSQPPGELG 172
C +F CR+G CI C+ DC D SDE +Y + + GV P E
Sbjct: 2604 ACGVGEFRCRDGTCIGNSSRCNQFVDCEDASDEMNCSATDCSSYFRLGVKGVLFQPCER- 2662
Query: 173 VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENK-AWNRAQCIPKK 231
T + P V ++ + R C C N A +CIP
Sbjct: 2663 -------TSLCYAPSWV---CDGANDCGDYSDERDCPGVKRPRCPLNYFACPSGRCIPMS 2712
Query: 232 WLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG 291
W CD + DC G DE +C K CS QF C N RCI+ WLCD +DCGDGSDE
Sbjct: 2713 WTCDKEDDCEHGEDET----HCNK--FCSEAQFECQNHRCISKQWLCDGSDDCGDGSDEA 2766
Query: 292 KECHDKYRTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDE 332
C K TC F+C C+ + + CDG+ DC D +DE
Sbjct: 2767 AHCEGK--TCGPSSFSCPGTHVCVPERWLCDGDKDCADGADE 2806
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C S+F C NG+CI+ W CDGD DC D SDE + G +P
Sbjct: 3575 CSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHC-IP------ 3627
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+ M+ + C + N C P W CDG+ DC
Sbjct: 3628 --------LRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDC 3679
Query: 241 VDGADENTTALNCPKQSSCSPDQ-FSCGNGR-CINTGWLCDHDNDCGDGSDE-------- 290
D +DEN + C P++ F C N R C+ G CD ++CGDG+DE
Sbjct: 3680 GDNSDENPEEC---ARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTA 3736
Query: 291 -GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C DK +EF C+N +C+ + C+ DDCGD SDE +C+
Sbjct: 3737 HTTHCKDK------KEFLCRNQRCLSSSLRCNMFDDCGDGSDEEDCS 3777
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRK 316
S+C+ QF C N +CI W CD ++DCGD SDE +C + C +F C C
Sbjct: 3332 SNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDEPPDCPE--FKCRPGQFQCSTGICTNP 3389
Query: 317 TYHCDGEDDCGDRSDEFNCN 336
+ CDG++DC D SDE NC+
Sbjct: 3390 AFICDGDNDCQDNSDEANCD 3409
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA+T++ +YWTD + + +A K TG N + +V+R P D+ VY Q + N
Sbjct: 1480 HPFAVTLYGGEVYWTDWRTNTLAKANKWTGHN-VTVVQRTNTQPFDLQVYHPSRQPMAPN 1538
Query: 77 PC--NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
PC N G C+ C N T C C KL + C
Sbjct: 1539 PCEANGGQGPCSHLCLINYNRTVSCACPHLMKLHKDNTTC 1578
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 78/199 (39%), Gaps = 54/199 (27%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC +F C N C W CDG+DDCGDNSDE+P C + PP
Sbjct: 3653 TCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECARFVC----PP----------- 3697
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
N P F C ++ C+ CDG +
Sbjct: 3698 ---------------------NRP----------FRCKNDRV-----CLWIGRQCDGTDN 3721
Query: 240 CVDGADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD-K 297
C DG DE + C +F C N RC+++ C+ +DCGDGSDE D K
Sbjct: 3722 CGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQRCLSSSLRCNMFDDCGDGSDEEDCSIDPK 3781
Query: 298 YRTCSSEEFACQN-FKCIR 315
+C++ C + +C+R
Sbjct: 3782 LTSCATNASICGDEARCVR 3800
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 223 NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHD 281
++ CI K W CDG+ DC DG+DE K C P++ +C G C+ LC+
Sbjct: 36 DQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCVPMSRLCNGV 95
Query: 282 NDCGDGSDEGKECHDKYRTCSSEEFACQN 310
DC DGSDEG C + CS CQ+
Sbjct: 96 QDCMDGSDEGPHCRELQGNCS--RLGCQH 122
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 251 LNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKEC--HDKYRTCSSEEFA 307
++ PK +CSP QF+C + CI+ GW CD + DC DGSDE E K + C E
Sbjct: 21 IDAPK--TCSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHN 78
Query: 308 CQNFK-CIRKTYHCDGEDDCGDRSDE 332
C + C+ + C+G DC D SDE
Sbjct: 79 CLGTELCVPMSRLCNGVQDCMDGSDE 104
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLR--GVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66
+VL S + F+++V ++IYW+D + R K + + + + +DI V+
Sbjct: 2089 VVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIGVQLKDIKVF 2148
Query: 67 SADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+ D QK N C + NGGC Q C G C C L +G C
Sbjct: 2149 NRDRQK-GTNVCAVANGGCQQLCLYRGRGQRACACAHGM-LAEDGASC 2194
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 56/149 (37%)
Query: 120 TCDGSKFFCRNGKCIS-RMWSCDGDDDCGDNSDEDPN--YCNVQITGVSQPPGELGVPGH 176
TC S+F C NG+C+S R W CDG++DC D SDE P +C Q
Sbjct: 2857 TCGPSEFRCANGRCLSSRQWECDGENDCHDQSDEAPKNPHCTSQ---------------- 2900
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
KC+ ++F C+ + C+ + LC+G
Sbjct: 2901 ----------------------------EHKCNASSQFLCSSGR------CVAEALLCNG 2926
Query: 237 DPDCVDGADENTTALN---CPKQSSCSPD 262
DC D +DE +N K S CS D
Sbjct: 2927 QDDCGDSSDERGCHINECLSRKLSGCSQD 2955
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 120 TCDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP 167
TC +F CR+ CIS+ W CDG+ DC D SDE P C QP
Sbjct: 26 TCSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQP 74
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 114 CVAKNITCDGS-KFFCRNGKCISRMWSCDGDDDCGDNSDE 152
C ++ C+ S +F C +G+C++ C+G DDCGD+SDE
Sbjct: 2897 CTSQEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDE 2936
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF+I V +YIY V++ K + ++ + L + D+ +Y Q N
Sbjct: 4091 HPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLVNLTGGLSHA-SDVVLYHQHKQPEVTN 4149
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVN 109
PC+ C C P+G C C +L N
Sbjct: 4150 PCD--RKKCEWLCLLSPSGPV-CTCPNGKRLDN 4179
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 20 AITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQ--KCSVNP 77
A+ + + ++W D + K G+ + +++ + VY Q NP
Sbjct: 1791 ALAIMGDKLWWADQVSEKMGTCSKADGSGSV-VLRNSTTLVMHMKVYDESIQLDHKGTNP 1849
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
C+++NG C+Q C P T C C L + + C
Sbjct: 1850 CSVNNGDCSQLCLPTSETTRSCMCTAGYSLRSGQQAC 1886
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 181/361 (50%), Gaps = 51/361 (14%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
VL + FA+T+ +YIYWTD + + + RA K TGAN ++ L P DIH+Y
Sbjct: 3223 VLSQDIPHIFALTLFEDYIYWTDWETKSINRAHKTTGANKTLLISTLH-RPMDIHIYHPY 3281
Query: 70 SQKCSVN-PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFC 128
Q N PC +N GC+ C P G +C C + L ++G+ CV+ C S+F C
Sbjct: 3282 RQPDVPNHPCKTNNAGCSNLCLLSPGGGHKCACPTNFYLGSDGKTCVSN---CTASQFVC 3338
Query: 129 RNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ--------ITGVSQPPG----------- 169
+N KCI W CD +DDCGD SDE + + TG+ P
Sbjct: 3339 KNDKCIPFWWKCDTEDDCGDRSDEPEDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQD 3398
Query: 170 ---------ELGVPGHVQITGVSQ-PPGIVMVMTTVQTGLMNHPNNRKCDEET----EFT 215
+ +P + T ++ PGI G + + + C E T +F
Sbjct: 3399 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--DGEDEKDCPEVTCAPNQFQ 3456
Query: 216 CTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCINT 274
C K +CIP+ W+CD D DCVDG+DE NC Q +C D+F C + GRCI
Sbjct: 3457 CAITK-----RCIPRVWVCDRDNDCVDGSDE---PANC-TQMTCGVDEFRCKDSGRCIPA 3507
Query: 275 GWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFN 334
W CD ++DCGDGSDE KE D+ RTC +F C+N +C+ + CD ++DCGD SDE +
Sbjct: 3508 RWKCDGEDDCGDGSDEPKEECDE-RTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEES 3566
Query: 335 C 335
C
Sbjct: 3567 C 3567
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 153/327 (46%), Gaps = 67/327 (20%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+ F + + ++++WT+ + +YR ++ + A + +++ +I +Y A Q+ N
Sbjct: 746 HAFGLCHYSSFLFWTEYRSGSIYRLDQSSKA--VSLLRNERPPIFEIRMYDAQQQQVGSN 803
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNI-----TCDGSKFFCRNG 131
C ++NGGC+ C P G +C C E L + C A C +F C+N
Sbjct: 804 KCRVNNGGCSSLCLATPRGR-QCACAEDQILGADSVTCEANPSYIPPPQCQPGEFACKNN 862
Query: 132 KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMV 191
+CI W CDGD+DC DNSDE P C+
Sbjct: 863 RCIQERWKCDGDNDCLDNSDEAPELCHQHTC----------------------------- 893
Query: 192 MTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTAL 251
P++R F C N+ CIP +WLCDGD DC + DE+ +
Sbjct: 894 -----------PSDR-------FKCKNNR------CIPNRWLCDGDNDCGNNEDESNSTC 929
Query: 252 NCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS-EEFACQN 310
+ +CSP+QFSC +GRCI W CD D+DCGD SDE C Y TC +F C N
Sbjct: 930 S---ARTCSPNQFSCASGRCIPISWTCDLDDDCGDRSDESASC--AYPTCFPLTQFTCNN 984
Query: 311 FKCIRKTYHCDGEDDCGDRSDEFNCNY 337
+CI + CD ++DCGD SDE C++
Sbjct: 985 GRCININWRCDNDNDCGDNSDEAGCSH 1011
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 147/336 (43%), Gaps = 25/336 (7%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
++L S ++PF + V+ +YI+WTD R V RA K+ G +M + + P I +
Sbjct: 2407 VILKSEPVHPFGLAVYGDYIFWTDWVRRAVQRANKYVGTDMKLLRVDIPQQPMGIIAVAN 2466
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCD-GSKFF 127
D+ C ++PC ++NGGC C P G C C +++ E C A N TC+ +F
Sbjct: 2467 DTDSCELSPCRVNNGGCQDLCLLTPKGHVNCSC-RGERVLQEDFTCKALNSTCNVHDEFE 2525
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ--ITGVSQPPGELGVPGHVQITGVSQP 185
C NG CI +CDG C D SDE +YC+ + G V GV
Sbjct: 2526 CGNGDCIDFSRTCDGVVHCKDKSDEKQSYCSSRKCKKGFLHCMNGRCVASRFWCNGVDD- 2584
Query: 186 PGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGAD 245
P N+ TEF C + CI C+ DC D +D
Sbjct: 2585 ---------CGDNSDEVPCNKTSCAATEFRCRD------GSCIGNSSRCNQFIDCEDASD 2629
Query: 246 E-NTTALNCPKQSSC----SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRT 300
E N TA +C + Q C W+CD NDCGD SDE +
Sbjct: 2630 EMNCTATDCSSYFKLGVKGTTFQKCEHTSLCYAPSWVCDGANDCGDYSDERNCPGGRKPK 2689
Query: 301 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C + FAC + +CI T+ CD EDDC + DE +C+
Sbjct: 2690 CPANYFACPSGRCIPMTWTCDKEDDCENGEDETHCS 2725
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 105/221 (47%), Gaps = 34/221 (15%)
Query: 119 ITCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP--PGELGVPG 175
+TC +F C++ G+CI W CDG+DDCGD SDE C+ + Q VPG
Sbjct: 3489 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPYQFRCKNNRCVPG 3548
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCD----EETEFTCTENKAWNRAQCIPKK 231
Q ++ + C E+EF+C + CI +
Sbjct: 3549 RWQCD--------------YDNDCGDNSDEESCTPRPCSESEFSCANGR------CIAGR 3588
Query: 232 WLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG 291
W CDGD DC DG+DE P+ C DQ+ C NG CI W CD D DC DG+DE
Sbjct: 3589 WKCDGDHDCADGSDEKDCI---PR---CEFDQYQCKNGHCIPMRWRCDADADCMDGTDE- 3641
Query: 292 KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
++C RTC +EF C N + CDGEDDCGD SDE
Sbjct: 3642 EDCGTGVRTCPLDEFQCNNTLRKPLAWKCDGEDDCGDNSDE 3682
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 109/225 (48%), Gaps = 36/225 (16%)
Query: 119 ITCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQ---PPGELGVP 174
+TC ++F C +CI R+W CD D+DC D SDE P C GV + +P
Sbjct: 3448 VTCAPNQFQCAITKRCIPRVWVCDRDNDCVDGSDE-PANCTQMTCGVDEFRCKDSGRCIP 3506
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPK 230
+ G G + +CDE T +F C N+ C+P
Sbjct: 3507 ARWKCDGEDD------------CGDGSDEPKEECDERTCEPYQFRCKNNR------CVPG 3548
Query: 231 KWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
+W CD D DC D +DE + P+ CS +FSC NGRCI W CD D+DC DGSDE
Sbjct: 3549 RWQCDYDNDCGDNSDEESCT---PR--PCSESEFSCANGRCIAGRWKCDGDHDCADGSDE 3603
Query: 291 GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
K+C + C +++ C+N CI + CD + DC D +DE +C
Sbjct: 3604 -KDCIPR---CEFDQYQCKNGHCIPMRWRCDADADCMDGTDEEDC 3644
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 103/259 (39%), Gaps = 98/259 (37%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C +F C N +CIS++W CDG DDCGD SDED ++T S T
Sbjct: 2732 CYPVQFECNNHRCISKLWVCDGADDCGDGSDEDSR---CRLTTCS--------------T 2774
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
G Q PG + C+P++WLCDGD DC
Sbjct: 2775 GSFQCPGTYV------------------------------------CVPERWLCDGDKDC 2798
Query: 241 VDGADENTTALNC-------------------PKQ---------------------SSCS 260
DGADE T A C PK +C
Sbjct: 2799 ADGADE-TLAAGCLYNNTCDEREFMCGNRQCIPKHFVCDHDDDCGDGSDESPECEYPTCG 2857
Query: 261 PDQFSCGNGRCI-NTGWLCDHDNDCGDGSDEGKE---CHDKYRTCSSEEFACQNFKCIRK 316
P +F C NGRC+ N+ W CD + DC D SDE + C C+ F C+N KCI +
Sbjct: 2858 PHEFRCANGRCLSNSQWECDGEFDCHDHSDEAPKNPRCSSPESKCNDSFFMCKNGKCIPE 2917
Query: 317 TYHCDGEDDCGDRSDEFNC 335
CD +DC D SDE NC
Sbjct: 2918 ALLCDNNNDCADGSDELNC 2936
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED---PNYCNVQITGVSQPPGELGVPGH 176
TC+ +F C+N +C+ W CD D+DCGDNSDE+ P C+ E
Sbjct: 3532 TCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCS---------ESEFSCANG 3582
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
I G + G + + + C EF + K CIP +W CD
Sbjct: 3583 RCIAGRWKCDG--------DHDCADGSDEKDCIPRCEFDQYQCK---NGHCIPMRWRCDA 3631
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC+DG DE +C D+F C N W CD ++DCGD SDE E
Sbjct: 3632 DADCMDGTDEEDCGTGV---RTCPLDEFQCNNTLRKPLAWKCDGEDDCGDNSDENPEECL 3688
Query: 297 KYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
K++ + F C+N + C+ CDG D+CGD +DE +C
Sbjct: 3689 KFQCPPNRPFRCKNDRVCLWIGRQCDGIDNCGDNTDEKDC 3728
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV-- 177
+C ++F CR+G CI C+ DC D SDE N T S +LGV G
Sbjct: 2598 SCAATEFRCRDGSCIGNSSRCNQFIDCEDASDE----MNCTATDCSSY-FKLGVKGTTFQ 2652
Query: 178 --QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENK-AWNRAQCIPKKWLC 234
+ T + P V ++ + R C + C N A +CIP W C
Sbjct: 2653 KCEHTSLCYAPSWV---CDGANDCGDYSDERNCPGGRKPKCPANYFACPSGRCIPMTWTC 2709
Query: 235 DGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC 294
D + DC +G DE T + + C P QF C N RCI+ W+CD +DCGDGSDE C
Sbjct: 2710 DKEDDCENGEDE--THCSERQDKFCYPVQFECNNHRCISKLWVCDGADDCGDGSDEDSRC 2767
Query: 295 HDKYRTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDE 332
+ TCS+ F C + C+ + + CDG+ DC D +DE
Sbjct: 2768 --RLTTCSTGSFQCPGTYVCVPERWLCDGDKDCADGADE 2804
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 96/218 (44%), Gaps = 58/218 (26%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C +G+CI W+CDGD+DCGD SDE C Q T +PPG
Sbjct: 1012 SCSSNQFKCNSGRCIPVHWTCDGDNDCGDYSDETHANCTNQAT---RPPGGC-------- 1060
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
EF C + CIP +W CDGD D
Sbjct: 1061 ------------------------------HTDEFQCRLD-----GLCIPMRWRCDGDTD 1085
Query: 240 CVDGADENTTALNCPKQSS-CSPD-QFSCGN-GRCINTGWLCDHDNDCGDGSDEGKECHD 296
C+D +DE NC + C P+ +F C + RCI+ W+CD D+DC D SDE + C
Sbjct: 1086 CMDSSDEK----NCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDE-ENCES 1140
Query: 297 KYRTCSSEEFACQNFK--CIRKTYHCDGEDDCGDRSDE 332
C C N C+ CDG DDCGD SDE
Sbjct: 1141 --LVCKPPSHTCANNTSICLPPEKLCDGSDDCGDGSDE 1176
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 119/278 (42%), Gaps = 69/278 (24%)
Query: 67 SADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKF 126
++D + C+ PC+ CA G +C D ++ + C+ + C+ ++
Sbjct: 3561 NSDEESCTPRPCSESEFSCANG--RCIAGRWKCDGDHDCADGSDEKDCIPR---CEFDQY 3615
Query: 127 FCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPP 186
C+NG CI W CD D DC D +DE+ C TGV P +
Sbjct: 3616 QCKNGHCIPMRWRCDADADCMDGTDEED--CG---TGVRTCPLD---------------- 3654
Query: 187 GIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE 246
EF C N P W CDG+ DC D +DE
Sbjct: 3655 --------------------------EFQC------NNTLRKPLAWKCDGEDDCGDNSDE 3682
Query: 247 NTTALNCPKQSSCSPDQ-FSCGNGR-CINTGWLCDHDNDCGDGSDEGKECHD---KYRTC 301
N C K C P++ F C N R C+ G CD ++CGD +DE K+C K ++C
Sbjct: 3683 NPE--ECLK-FQCPPNRPFRCKNDRVCLWIGRQCDGIDNCGDNTDE-KDCESPTAKPKSC 3738
Query: 302 SSE--EFACQNFKCIRKTYHCDGEDDCGDRSDEFNCNY 337
S + EF C+N KCI C+ DDCGD SDE +C++
Sbjct: 3739 SQDKNEFLCENKKCISANLRCNFFDDCGDGSDEKSCSH 3776
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRK 316
S+C+ QF C N +CI W CD ++DCGD SDE ++C + C +F C C
Sbjct: 3329 SNCTASQFVCKNDKCIPFWWKCDTEDDCGDRSDEPEDCPE--FKCRPGQFQCSTGICTNP 3386
Query: 317 TYHCDGEDDCGDRSDEFNCN 336
+ CDG++DC D SDE NC+
Sbjct: 3387 AFICDGDNDCQDNSDEANCD 3406
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI- 179
C S+F C NG+CI+ W CDGD DC D SDE + G +P +
Sbjct: 3572 CSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCIPRCEFDQYQCKNGHC-IPMRWRCD 3630
Query: 180 ---------------TGVSQPPGIVMVMTTVQ-TGLMNHPNNRKCDEE------------ 211
TGV P + Q + P KCD E
Sbjct: 3631 ADADCMDGTDEEDCGTGVRTCP-----LDEFQCNNTLRKPLAWKCDGEDDCGDNSDENPE 3685
Query: 212 --TEFTCTENKAW---NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPD--QF 264
+F C N+ + N C+ CDG +C D DE K SCS D +F
Sbjct: 3686 ECLKFQCPPNRPFRCKNDRVCLWIGRQCDGIDNCGDNTDEKDCESPTAKPKSCSQDKNEF 3745
Query: 265 SCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGED 324
C N +CI+ C+ +DCGDGSDE ++CS E +++ C+ T C E
Sbjct: 3746 LCENKKCISANLRCNFFDDCGDGSDE--------KSCSHEH---KSYDCMTNTTMCGDEA 3794
Query: 325 DC 326
C
Sbjct: 3795 QC 3796
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 223 NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHD 281
++ CI K W CDG+ DC DG+DE+ K S C P++ +C G CI+ LC+
Sbjct: 38 DQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEHNCLGTELCIHMSKLCNGL 97
Query: 282 NDCGDGSDEGKECHDKYRTCSSEEFACQN 310
+DC DGSDEG C ++ C++ CQ+
Sbjct: 98 HDCFDGSDEGPHCREQLANCTA--LGCQH 124
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA+T++ +YWTD + + +A K TG N + +V+R P D+ VY Q + N
Sbjct: 1478 HPFAVTLYGGEVYWTDWRTNTLAKANKWTGHN-VTVVQRTNTQPFDLQVYHPSRQPLAPN 1536
Query: 77 PC--NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
PC N G C+ C N T C C KL + C
Sbjct: 1537 PCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTC 1576
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 258 SCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKEC--HDKYRTCSSEEFACQNFK-C 313
+CSP QF+C + CI+ GW CD + DC DGSDE + K C E C + C
Sbjct: 28 TCSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEHNCLGTELC 87
Query: 314 IRKTYHCDGEDDCGDRSDE 332
I + C+G DC D SDE
Sbjct: 88 IHMSKLCNGLHDCFDGSDE 106
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 1 MRIATGASMVLISATIYPFAITVHRNYIYWTDLQLR--GVYRAEKHTGANMIEMVKRLED 58
+ +VL S + F+++V +YIYW+D + R K + + +
Sbjct: 2077 LETGENREVVLSSDNMDMFSVSVFEDYIYWSDRTHANGSIKRGSKDNATESVSLRTGIGV 2136
Query: 59 SPRDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKC 101
+DI V++ QK N C +NGGC Q C G C C
Sbjct: 2137 QLKDIKVFNRARQK-GTNVCAQNNGGCQQLCLFRGGGRRTCAC 2178
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 120 TCDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP 167
TC +F C++ CIS+ W CDG+ DC D SDE P+ C QP
Sbjct: 28 TCSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQP 76
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 69 DSQKCSVNPCNIH-----NGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDG 123
+S +C C H NG C + +G +C D S + R C + C+
Sbjct: 2847 ESPECEYPTCGPHEFRCANGRCLSNSQWECDGEFDCH-DHSDEAPKNPR-CSSPESKCND 2904
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYC-NVQITGVSQPPGELGV 173
S F C+NGKCI CD ++DC D SDE N C N +++G SQ +L +
Sbjct: 2905 SFFMCKNGKCIPEALLCDNNNDCADGSDELNCFINECLNKKLSGCSQECEDLKI 2958
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 299 RTCSSEEFACQN-FKCIRKTYHCDGEDDCGDRSDE 332
+TCS ++FAC++ CI K + CDGE DC D SDE
Sbjct: 27 KTCSPKQFACKDQITCISKGWRCDGEKDCPDGSDE 61
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 1 MRIATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSP 60
+ + L AT A+ + + ++W D + K G + +++
Sbjct: 1774 LEVIVAVKSQLSKAT----ALAIMGDKLWWADQASERMGTCNKKDGTE-VTVLRNSTTLV 1828
Query: 61 RDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+ VY Q+ NPC+++NG C+Q C P + C C L + + C
Sbjct: 1829 MLMKVYDESIQQAGSNPCSVNNGDCSQLCLPTSETSRSCMCTAGYSLKSGQQSC 1882
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 164 bits (415), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 163/355 (45%), Gaps = 61/355 (17%)
Query: 19 FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQK-CSVNP 77
A+T+ +YIYWTD + + + R K +GA+ + ++ + DI VY + Q S +
Sbjct: 3218 IALTLFEDYIYWTDGKTKSLSRVHKTSGADRLSLINSWH-AITDIQVYHSYRQPDVSKHL 3276
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRM 137
C ++NGGC+ C GP T C C + L + R C++ C S+F C+ KCI
Sbjct: 3277 CTVNNGGCSHLCLLGPGKTHTCACPTNFYLAADNRTCLSN---CTASQFRCKTDKCIPFW 3333
Query: 138 WSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI-TGVSQPPGIV------- 189
W CD DDCGD SDE P+ C P PG Q TG+ P +
Sbjct: 3334 WKCDTVDDCGDGSDE-PDDC----------PEFKCQPGRFQCGTGLCALPAFICDGENDC 3382
Query: 190 --------MVMTTVQTGLMNHPNNRKC--------------DEETEFTCTEN-------K 220
G N+KC DEE E C EN +
Sbjct: 3383 GDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQ 3442
Query: 221 AWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDH 280
CI K W+CD DPDC D +DE NC K+ +C P +F C N CI W CD+
Sbjct: 3443 CKTTKHCISKLWVCDEDPDCADASDE----ANCDKK-TCGPHEFQCKNNNCIPDHWRCDN 3497
Query: 281 DNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
NDC D SDE C K +TC+ ++F C N C+ + CDGE DC D SDE NC
Sbjct: 3498 QNDCSDNSDE-DNC--KPQTCTLKDFLCSNGDCVSSRFWCDGEFDCADGSDEKNC 3549
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 153/325 (47%), Gaps = 68/325 (20%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF ++ H NY++WTD +++ + T N + +++ + +Y Q+ N
Sbjct: 740 HPFGLSHHGNYVFWTDYMNGSIFQLDLMT--NEVTLLRHERAPLFGLQIYDPRKQQ-GDN 796
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV-----AKNITCDGSKFFCRNG 131
C I+NGGC C P G C C ++ L G C + C +F C+N
Sbjct: 797 MCRINNGGCGTLCLAIPAGRV-CACADNQLLDENGTTCTFNPEEIRFHICKPGEFRCKNK 855
Query: 132 KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMV 191
CI W CDGDDDC D SDED C
Sbjct: 856 HCIQARWKCDGDDDCLDGSDEDSVTCF--------------------------------- 882
Query: 192 MTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTAL 251
N C ++ +F C N+ CIPK+WLCDG DC G++E+ +
Sbjct: 883 -------------NHSCPDD-QFKCQNNR------CIPKRWLCDGANDC--GSNEDESNQ 920
Query: 252 NCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS-EEFACQN 310
C ++ C DQFSCGNGRCI T WLCD ++DCGD +DE C ++ TC +F C++
Sbjct: 921 TCTART-CQADQFSCGNGRCIPTAWLCDREDDCGDQTDEVASC--EFPTCEPLTQFICKS 977
Query: 311 FKCIRKTYHCDGEDDCGDRSDEFNC 335
+CI +HCD +DDCGDRSDE C
Sbjct: 978 GRCISNKWHCDTDDDCGDRSDEVGC 1002
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 155/368 (42%), Gaps = 79/368 (21%)
Query: 19 FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPC 78
++ V+ +YI+W+D R + R+ K+TG + + P I + D+ C ++PC
Sbjct: 2409 LSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGIIAVANDTNSCELSPC 2468
Query: 79 NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCD-GSKFFCRNGKCISRM 137
+ NGGC C P+G C C L+ R CV KN +C+ S+F C NG C+ +
Sbjct: 2469 ALLNGGCHDLCLLTPDGRVNCSCRGDRVLLANNR-CVTKNSSCNIYSEFECGNGDCVDYV 2527
Query: 138 WSCDGDDDCGDNSDEDPNYCNVQI--TGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTV 195
+CDG C D SDE YC + +G VP H ++ + G
Sbjct: 2528 LTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVP-HGKLCDGTNDCG-------- 2578
Query: 196 QTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE----- 246
+ + C T EF C + CIP+ C+ + DC D +DE
Sbjct: 2579 -----DSSDELDCKVSTCSTVEFRCAD------GTCIPRSARCNQNMDCSDASDEKGCNN 2627
Query: 247 -------------------NTTA---------------------LNCPKQS--SCSPDQF 264
N+T+ L CP Q+ C + F
Sbjct: 2628 TDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYF 2687
Query: 265 SCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGED 324
C +GRCI W+CD DC DG DE C +CS +FAC KCI K + CDGED
Sbjct: 2688 GCPSGRCILNTWVCDGQKDCEDGLDE-LHCDS---SCSWNQFACSVKKCISKHWICDGED 2743
Query: 325 DCGDRSDE 332
DCGD DE
Sbjct: 2744 DCGDSLDE 2751
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 107/227 (47%), Gaps = 44/227 (19%)
Query: 120 TCDGSKFFCRNGK-CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG------ 172
+C F C+ K CIS++W CD D DC D SDE C+ + G P E
Sbjct: 3435 SCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEAN--CDKKTCG----PHEFQCKNNNC 3488
Query: 173 VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCI 228
+P H + Q ++ + C +T +F C+ C+
Sbjct: 3489 IPDHWRCDN--------------QNDCSDNSDEDNCKPQTCTLKDFLCSN------GDCV 3528
Query: 229 PKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGS 288
++ CDG+ DC DG+DE NC ++SCS DQF C NG+C++ W CD DC G
Sbjct: 3529 SSRFWCDGEFDCADGSDEK----NC--ETSCSKDQFQCSNGQCLSAKWKCDGHEDCKYGE 3582
Query: 289 DEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DE K C + CSS E+ C + C+ + C+GE DC D SDE +C
Sbjct: 3583 DE-KNCEPAFPVCSSSEYMCASGGCLSASLKCNGEPDCVDGSDEMDC 3628
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 103/260 (39%), Gaps = 95/260 (36%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C KCIS+ W CDG+DDCGD+ DE + C
Sbjct: 2719 SCSWNQFACSVKKCISKHWICDGEDDCGDSLDESDSICGAVTCAADM------------- 2765
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
F+C + A C+P+ WLCDG+ D
Sbjct: 2766 ----------------------------------FSCQGSHA-----CVPQHWLCDGERD 2786
Query: 240 CVDGADENTTA------------------LNCPKQ---------------------SSCS 260
C DG+DE ++A + PKQ C
Sbjct: 2787 CPDGSDELSSAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDEFLQCGYRQCG 2846
Query: 261 PDQFSCGNGRC-INTGWLCDHDNDCGDGSDEG---KECHDKYRTCSSEEFACQNFKCIRK 316
P++F C +GRC +NT W CD D DC D SDE C +C+S F C+N +CI
Sbjct: 2847 PEEFRCADGRCLVNTLWQCDGDFDCPDSSDEAPINPRCRSAEHSCNSSFFMCKNGRCIPS 2906
Query: 317 TYHCDGEDDCGDRSDEFNCN 336
CD DDCGD SDE NC+
Sbjct: 2907 DGLCDIRDDCGDGSDETNCH 2926
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 104/218 (47%), Gaps = 18/218 (8%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C +F C NG+C+S W CDG +DC DE + S+ G +
Sbjct: 3552 SCSKDQFQCSNGQCLSAKWKCDGHEDCKYGEDEKNCEPAFPVCSSSEYMCASGGCLSASL 3611
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
+P + G +C E+ +F C N+A CIP +WLCDG D
Sbjct: 3612 KCNGEPDCV--------DGSDEMDCVIECKED-QFQCK-----NKAYCIPIRWLCDGIYD 3657
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
CVDG+DE T S C D+F C N C W+CD ++DCGD SDE + K+
Sbjct: 3658 CVDGSDEETCGRG---GSICRDDEFLCNNSLCKLHFWVCDGEDDCGDNSDEAPDMCVKFL 3714
Query: 300 TCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNCN 336
+ + C+N + C++ C+G +DCGD SDE +C+
Sbjct: 3715 CPPTRPYRCRNDRICLQLEKICNGINDCGDNSDEEHCS 3752
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVS 183
++F C++G+CIS W CD DDDCGD SDE + G +PGH G +
Sbjct: 971 TQFICKSGRCISNKWHCDTDDDCGDRSDEVGCVHSCLDDQFRCSSGRC-IPGHWACDGDN 1029
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNR--AQCIPKKWLCDGDPDCV 241
H N K + + C N+ R CIP W CDG+ DC
Sbjct: 1030 DCGDF---------SDETHINCTKEEARSPAGCIGNEFQCRPDGNCIPDLWRCDGEKDCE 1080
Query: 242 DGADE---NTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDCGDGSDEGKECHDK 297
DG+DE N T C ++ +FSC GRCIN W+CD D DC D SDE ++C D
Sbjct: 1081 DGSDEKGCNGTIRLCDHKT-----KFSCRSTGRCINNAWVCDGDVDCEDQSDE-EDC-DS 1133
Query: 298 YRTCSSEEFACQN--FKCIRKTYHCDGEDDCGDRSDE 332
+ C ++ C N C++ C+G DC D SDE
Sbjct: 1134 F-LCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDE 1169
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 11/120 (9%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSP-----DQFSCG-NGRCINTGWLC 278
+CIP W CDGD DC D +DE T +NC K+ + SP ++F C +G CI W C
Sbjct: 1016 GRCIPGHWACDGDNDCGDFSDE--THINCTKEEARSPAGCIGNEFQCRPDGNCIPDLWRC 1073
Query: 279 DHDNDCGDGSDEGKECHDKYRTCSSE-EFACQNF-KCIRKTYHCDGEDDCGDRSDEFNCN 336
D + DC DGSDE K C+ R C + +F+C++ +CI + CDG+ DC D+SDE +C+
Sbjct: 1074 DGEKDCEDGSDE-KGCNGTIRLCDHKTKFSCRSTGRCINNAWVCDGDVDCEDQSDEEDCD 1132
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C +F C +G+CI W+CDGD+DCGD SDE + N P G +G +
Sbjct: 1005 SCLDDQFRCSSGRCIPGHWACDGDNDCGDFSDE--THINCTKEEARSPAGCIGNEFQCRP 1062
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNN-------RKCDEETEFTCTENKAWNRAQCIPKKW 232
G P + + + + R CD +T+F+C +CI W
Sbjct: 1063 DGNCIPD---LWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCRST-----GRCINNAW 1114
Query: 233 LCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN--GRCINTGWLCDHDNDCGDGSDE 290
+CDGD DC D +DE C P ++ C N C+ LC+ DC DGSDE
Sbjct: 1115 VCDGDVDCEDQSDEEDC-----DSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDE 1169
Query: 291 GKECHDKYRTCSSEEFACQN 310
G C + CS C N
Sbjct: 1170 GDLCDE----CSLNNGGCSN 1185
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 205 NRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQF 264
N C+ +EF C C+ CDG P C D +DE L C +S C
Sbjct: 2507 NSSCNIYSEFEC------GNGDCVDYVLTCDGIPHCKDKSDEKL--LYCENRS-CRSGFK 2557
Query: 265 SCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGED 324
C N RC+ G LCD NDCGD SDE +C K TCS+ EF C + CI ++ C+
Sbjct: 2558 PCYNRRCVPHGKLCDGTNDCGDSSDE-LDC--KVSTCSTVEFRCADGTCIPRSARCNQNM 2614
Query: 325 DCGDRSDEFNCN 336
DC D SDE CN
Sbjct: 2615 DCSDASDEKGCN 2626
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 77/181 (42%), Gaps = 51/181 (28%)
Query: 197 TGLMNHPNNRKCDE---ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNC 253
T +NR C ++F C +K CIP W CD DC DG+DE +C
Sbjct: 3302 TNFYLAADNRTCLSNCTASQFRCKTDK------CIPFWWKCDTVDDCGDGSDEPD---DC 3352
Query: 254 PKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE----------------------- 290
P + C P +F CG G C ++CD +NDCGD SDE
Sbjct: 3353 P-EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIP 3411
Query: 291 -----------GKECHDK---YRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
G E +K +CS + F C+ K CI K + CD + DC D SDE NC
Sbjct: 3412 VNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANC 3471
Query: 336 N 336
+
Sbjct: 3472 D 3472
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA++++ + +YWTD + + +A K TG N + ++++ P D+ +Y Q + N
Sbjct: 1471 HPFAVSLYGSEVYWTDWRTNTLAKANKWTGQN-VSVIQKTSAQPFDLQIYHPSRQPQAPN 1529
Query: 77 PC--NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
PC N G C+ C N +A C C KL ++ + C
Sbjct: 1530 PCAANEGRGPCSHLCLINHNRSAACACPHLMKLSSDKKTC 1569
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 213 EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS--SCSPDQFSC-GNG 269
EF C ++ C+ + WLCDGDPDC D +DE+ CP++ C + +C G+
Sbjct: 36 EFLCHDH-----VTCVSQSWLCDGDPDCPDQSDESLDT--CPEEVEIKCPLNHIACHGSS 88
Query: 270 RCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKC--IRKTYHCDGED 324
C++ LC+ DC DG DEG C + +C ++ CQ FKC +R C ED
Sbjct: 89 ACVHLSKLCNGVVDCPDGFDEGGHCQELLPSC--QQLNCQ-FKCAMVRNATRCYCED 142
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 1 MRIATGAS--MVLISATIYPFAITVHRNYIYWTDLQLR--GVYRAEKHTGANMIEMVKRL 56
+ + TGA+ ++L + + F++ V YIYW+D V R K+ + M L
Sbjct: 2067 IDLDTGANREVLLSGSNVDLFSVAVFGAYIYWSDRAHANGSVRRGHKNDATETVTMRTGL 2126
Query: 57 EDSPRDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115
+ ++I +++ +K N C NGGC Q C N C C L +G C+
Sbjct: 2127 GVNLKEIKIFNRVREK-GTNVCAKENGGCQQLCLYRGNSRRTCACAHGY-LAGDGVTCL 2183
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 20 AITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79
A+T+ ++W D L + K G N +++ + VY ++Q+ S N C
Sbjct: 1782 ALTIMDKKLWWADQNLAQLGTCNKRDGRNP-SILRNKTSGVVHMKVYDKEAQQGS-NSCQ 1839
Query: 80 IHNGGCAQSCHPGPNGTAECKC 101
++NGGC+Q C P T C C
Sbjct: 1840 VNNGGCSQLCLPTSETTRTCMC 1861
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCN----VQITGVSQPPG 169
C + +C+ S F C+NG+CI CD DDCGD SDE + N +I+G SQ
Sbjct: 2884 CRSAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCHINECLSKKISGCSQDCQ 2943
Query: 170 ELGV 173
+L V
Sbjct: 2944 DLPV 2947
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 121 CDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQI 161
CD +F C + C+S+ W CDGD DC D SDE + C ++
Sbjct: 32 CDPGEFLCHDHVTCVSQSWLCDGDPDCPDQSDESLDTCPEEV 73
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 52/147 (35%), Gaps = 55/147 (37%)
Query: 121 CDGSKFFCRNGKC-ISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C +F C +G+C ++ +W CDGD DC D+SDE
Sbjct: 2845 CGPEEFRCADGRCLVNTLWQCDGDFDCPDSSDE--------------------------- 2877
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW-NRAQCIPKKWLCDGDP 238
P N +C E +C + +CIP LCD
Sbjct: 2878 ----------------------APINPRC-RSAEHSCNSSFFMCKNGRCIPSDGLCDIRD 2914
Query: 239 DCVDGADENTTALN---CPKQSSCSPD 262
DC DG+DE +N K S CS D
Sbjct: 2915 DCGDGSDETNCHINECLSKKISGCSQD 2941
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY------SADS 70
+ + ITV +Y+Y T + R + G ++ ++K +S R I Y + S
Sbjct: 415 HLYGITVFEDYLYATSSDNFNIIRINRFNGTDIHSIIKM--ESARGIRTYQKRTQPTVRS 472
Query: 71 QKCSVNPCNIHNGGCAQSCHPGPN-GTAECKCDESTKLVNEGRMC 114
C V+ + GGC+ C + T C+C + ++GR C
Sbjct: 473 HACEVDAYGM-PGGCSHICLLSSSYKTRTCRCRTGFNMGSDGRSC 516
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 51/144 (35%)
Query: 126 FFCRNGK-CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQ 184
+ CRN + C+ C+G +DCGDNSDE+ +C+ +++ S+P
Sbjct: 3721 YRCRNDRICLQLEKICNGINDCGDNSDEE--HCSGKLSLKSKP----------------- 3761
Query: 185 PPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGA 244
C ++ EFTC+ NR CIP + CD DC DG+
Sbjct: 3762 -----------------------CKKD-EFTCS-----NR-NCIPMELQCDSLDDCGDGS 3791
Query: 245 DENTTALNCPKQSSCSPDQFSCGN 268
DE L P + +C + CG+
Sbjct: 3792 DEQ-GCLKTPIEHTCENNGNPCGD 3814
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 117 KNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE 152
K+ C +F C N CI CD DDCGD SDE
Sbjct: 3758 KSKPCKKDEFTCSNRNCIPMELQCDSLDDCGDGSDE 3793
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 164/355 (46%), Gaps = 61/355 (17%)
Query: 19 FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQK-CSVNP 77
A+T+ +YIYWTD + + + RA K +GA+ + ++ + DI VY + Q S +
Sbjct: 3218 IALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLIYSWH-AITDIQVYHSYRQPDVSKHL 3276
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRM 137
C I+NGGC+ C P T C C + L + R C++ C S+F C+ KCI
Sbjct: 3277 CMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTCLSN---CTASQFRCKTDKCIPFW 3333
Query: 138 WSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI-TGVSQPPGIVMV----- 191
W CD DDCGD SDE P+ C P PG Q TG+ P +
Sbjct: 3334 WKCDTVDDCGDGSDE-PDDC----------PEFRCQPGRFQCGTGLCALPAFICDGENDC 3382
Query: 192 ----------MTTVQTGLMNHPNNRKC--------------DEETEFTCTEN-------K 220
+G N+KC DEE E C EN +
Sbjct: 3383 GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQ 3442
Query: 221 AWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDH 280
CI K W+CD DPDC D +DE NC K++ C P +F C N CI W CD
Sbjct: 3443 CKTTKHCISKLWVCDEDPDCADASDE----ANCDKKT-CGPHEFQCKNNNCIPDHWRCDS 3497
Query: 281 DNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
NDC D SDE + C K +TC+ ++F C N C+ + CDG+ DC D SDE NC
Sbjct: 3498 QNDCSDNSDE-ENC--KPQTCTLKDFLCANGDCVSSRFWCDGDFDCADGSDERNC 3549
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 156/367 (42%), Gaps = 77/367 (20%)
Query: 19 FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPC 78
++ V+ NYI+W+D R + R+ K+TG + + + P I + D+ C ++PC
Sbjct: 2409 LSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSCELSPC 2468
Query: 79 NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDG-SKFFCRNGKCISRM 137
+ NGGC C PNG C C L+ + R CV KN +C+ S+F C NG+CI
Sbjct: 2469 ALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNR-CVTKNSSCNAYSEFECGNGECIDYQ 2527
Query: 138 WSCDGDDDCGDNSDEDPNYC-NVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQ 196
+CDG C D SDE YC N +P H ++ G
Sbjct: 2528 LTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGENDCG--------- 2578
Query: 197 TGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE------ 246
++ + C T EF C + CIP+ C+ + DC D +DE
Sbjct: 2579 ----DNSDELDCKVSTCATVEFRCAD------GTCIPRSARCNQNIDCADASDEKNCNNT 2628
Query: 247 ------------------NTTA---------------------LNCPKQS--SCSPDQFS 265
N+T+ L CP Q+ C + FS
Sbjct: 2629 DCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFS 2688
Query: 266 CGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDD 325
C +GRCI W+CD DC DG DE C +CS +FAC KCI K + CDGEDD
Sbjct: 2689 CPSGRCILNTWICDGQKDCEDGRDEF-HCDS---SCSWNQFACSAQKCISKHWICDGEDD 2744
Query: 326 CGDRSDE 332
CGD DE
Sbjct: 2745 CGDGLDE 2751
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 152/364 (41%), Gaps = 106/364 (29%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF ++ H NY++WTD +++ + T + +++ + +Y Q+ N
Sbjct: 740 HPFGLSHHGNYVFWTDYMNGSIFQLDLITSE--VTLLRHERPPLFGLQIYDPRKQQ-GDN 796
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV-----AKNITCDGSKFFCRNG 131
C ++NGGC+ C P G C C ++ L G C A C +F C+N
Sbjct: 797 MCRVNNGGCSTLCLAIPGGRV-CACADNQLLDENGTTCTFNPGEALPHICKAGEFRCKNR 855
Query: 132 KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMV 191
CI W CDGDDDC D SDED C
Sbjct: 856 HCIQARWKCDGDDDCLDGSDEDSVNCF--------------------------------- 882
Query: 192 MTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTAL 251
N C ++ +F C N+ CIPK+WLCDG DC G++E+ +
Sbjct: 883 -------------NHSCPDD-QFKCQNNR------CIPKRWLCDGANDC--GSNEDESNQ 920
Query: 252 NCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS-EEFACQN 310
C ++ C DQFSCGNGRCI WLCD ++DCGD +DE C ++ TC +F C++
Sbjct: 921 TCTART-CQVDQFSCGNGRCIPRAWLCDREDDCGDQTDEMASC--EFPTCEPLTQFVCKS 977
Query: 311 FKCIRKTYH--------------------------------------CDGEDDCGDRSDE 332
+CI +H CDG++DCGD SDE
Sbjct: 978 GRCISSKWHCDSDDDCGDGSDEVGCVHSCFDNQFRCSSGRCIPGHWACDGDNDCGDFSDE 1037
Query: 333 FNCN 336
N
Sbjct: 1038 AQIN 1041
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 105/227 (46%), Gaps = 44/227 (19%)
Query: 120 TCDGSKFFCRNGK-CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG------ 172
+C F C+ K CIS++W CD D DC D SDE C+ + G P E
Sbjct: 3435 SCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEAN--CDKKTCG----PHEFQCKNNNC 3488
Query: 173 VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCI 228
+P H + Q ++ + C +T +F C C+
Sbjct: 3489 IPDHWRCDS--------------QNDCSDNSDEENCKPQTCTLKDFLCAN------GDCV 3528
Query: 229 PKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGS 288
++ CDGD DC DG+DE NC ++SCS DQF C NG+CI W CD DC G
Sbjct: 3529 SSRFWCDGDFDCADGSDER----NC--ETSCSKDQFRCSNGQCIPAKWKCDGHEDCKYGE 3582
Query: 289 DEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DE K C TCSS E+ C + CI + C+GE DC D SDE +C
Sbjct: 3583 DE-KSCEPASPTCSSREYICASDGCISASLKCNGEYDCADGSDEMDC 3628
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 106/260 (40%), Gaps = 95/260 (36%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C KCIS+ W CDG+DDCGD DE + C
Sbjct: 2719 SCSWNQFACSAQKCISKHWICDGEDDCGDGLDESDSICGAITCAADM------------- 2765
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
F+C ++A C+P+ WLCDG+ D
Sbjct: 2766 ----------------------------------FSCQGSRA-----CVPRHWLCDGERD 2786
Query: 240 CVDGADENTTA------------------LNCPKQ---------------------SSCS 260
C DG+DE +TA + PKQ C
Sbjct: 2787 CPDGSDELSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESPQCGYRQCG 2846
Query: 261 PDQFSCGNGRC-INTGWLCDHDNDCGDGSDEG---KECHDKYRTCSSEEFACQNFKCIRK 316
++FSC +GRC +NT W CD D DC D SDE +C ++C+S F C+N +CI
Sbjct: 2847 TEEFSCADGRCLLNTQWQCDGDFDCPDHSDEAPLNPKCKSAEQSCNSSFFMCKNGRCIPS 2906
Query: 317 TYHCDGEDDCGDRSDEFNCN 336
CD +DDCGD SDE NC+
Sbjct: 2907 GGLCDNKDDCGDGSDERNCH 2926
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 114/222 (51%), Gaps = 23/222 (10%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVP--GHV 177
TC +F C +G CI R C+ + DC D SDE N N T + LGV G +
Sbjct: 2590 TCATVEFRCADGTCIPRSARCNQNIDCADASDE-KNCNNTDCTHFYK----LGVKTTGFI 2644
Query: 178 QITGVSQPPGIVMVMTTVQTGLM---NHPNNRKCDEETEFTCTENK-AWNRAQCIPKKWL 233
+ S + ++ T + G ++ + KC + + C EN + +CI W+
Sbjct: 2645 RCNSTS----LCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFSCPSGRCILNTWI 2700
Query: 234 CDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE 293
CDG DC DG DE +C SSCS +QF+C +CI+ W+CD ++DCGDG DE
Sbjct: 2701 CDGQKDCEDGRDE----FHC--DSSCSWNQFACSAQKCISKHWICDGEDDCGDGLDESDS 2754
Query: 294 CHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFN 334
TC+++ F+CQ + C+ + + CDGE DC D SDE +
Sbjct: 2755 ICGAI-TCAADMFSCQGSRACVPRHWLCDGERDCPDGSDELS 2795
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C +F C NG+CI W CDG +DC DE E P
Sbjct: 3552 SCSKDQFRCSNGQCIPAKWKCDGHEDCKYGEDE--------------KSCEPASPTCSSR 3597
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
+ G + + + D TE + + N+A CIP +WLCDG D
Sbjct: 3598 EYICASDGCISASLKCNGEYDCADGSDEMDCVTECKEDQFRCKNKAHCIPIRWLCDGIHD 3657
Query: 240 CVDGADENTTALNCPKQSS-CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKY 298
CVDG+DE NC + + C D+F C N C W+CD ++DCGD SDE + K+
Sbjct: 3658 CVDGSDEE----NCERGGNICRADEFLCNNSLCKLHFWVCDGEDDCGDNSDEAPDMCVKF 3713
Query: 299 RTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
S+ C+N + C++ C+G D+CGD SDE +C
Sbjct: 3714 LCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHC 3751
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 112 RMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL 171
+ C A+ TC +F C NG+CI R W CD +DDCGD +DE + ++Q +
Sbjct: 920 QTCTAR--TCQVDQFSCGNGRCIPRAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKS 977
Query: 172 G--VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIP 229
G + + V + N +F C+ + CIP
Sbjct: 978 GRCISSKWHCDSDDDCGDGSDEVGCVHSCFDN-----------QFRCSSGR------CIP 1020
Query: 230 KKWLCDGDPDCVDGADENTTALNCPKQSSCSP-----DQFSCG-NGRCINTGWLCDHDND 283
W CDGD DC D +DE +NC K+ SP ++F C +G C+ W CD + D
Sbjct: 1021 GHWACDGDNDCGDFSDE--AQINCTKEEIHSPAGCNGNEFQCHPDGNCVPDLWRCDGEKD 1078
Query: 284 CGDGSDEGKECHDKYRTCSSE-EFACQNF-KCIRKTYHCDGEDDCGDRSDEFNCN 336
C DGSDE K C+ R C + +F+C + +CI K + CDG+ DC D+SDE +C+
Sbjct: 1079 CEDGSDE-KGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCEDQSDEDDCD 1132
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC F C NG C+S + CDGD DC D SDE + G+ +P +
Sbjct: 3514 TCTLKDFLCANGDCVSSRFWCDGDFDCADGSDERNCETSCSKDQFRCSNGQC-IPAKWKC 3572
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQ-CIPKKWLCDGDP 238
G + + K E TC+ + + CI C+G+
Sbjct: 3573 DGHED---------------CKYGEDEKSCEPASPTCSSREYICASDGCISASLKCNGEY 3617
Query: 239 DCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCINTGWLCDHDNDCGDGSDEGKECHDK 297
DC DG+DE ++C + C DQF C N CI WLCD +DC DGSDE + C
Sbjct: 3618 DCADGSDE----MDCVTE--CKEDQFRCKNKAHCIPIRWLCDGIHDCVDGSDE-ENCERG 3670
Query: 298 YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C ++EF C N C + CDGEDDCGD SDE
Sbjct: 3671 GNICRADEFLCNNSLCKLHFWVCDGEDDCGDNSDE 3705
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 96/219 (43%), Gaps = 60/219 (27%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C ++F C +G+CI W+CDGD+DCGD SDE C + + P G G
Sbjct: 1005 SCFDNQFRCSSGRCIPGHWACDGDNDCGDFSDEAQINCTKE--EIHSPAGCNG------- 1055
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
EF C + C+P W CDG+ D
Sbjct: 1056 --------------------------------NEFQCHPD-----GNCVPDLWRCDGEKD 1078
Query: 240 CVDGADE---NTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDCGDGSDEGKECH 295
C DG+DE N T C ++ +FSC GRCIN W+CD D DC D SDE +C
Sbjct: 1079 CEDGSDEKGCNGTIRLCDHKT-----KFSCWSTGRCINKAWVCDGDIDCEDQSDE-DDC- 1131
Query: 296 DKYRTCSSEEFACQN--FKCIRKTYHCDGEDDCGDRSDE 332
D + C + C N C++ C+G+ DC D SDE
Sbjct: 1132 DSF-LCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDE 1169
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 205 NRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQF 264
N C+ +EF C +CI + CDG P C D +DE L C + SC
Sbjct: 2507 NSSCNAYSEFEC------GNGECIDYQLTCDGIPHCKDKSDEKL--LYC-ENRSCRRGFK 2557
Query: 265 SCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGED 324
C N RCI G LCD +NDCGD SDE +C K TC++ EF C + CI ++ C+
Sbjct: 2558 PCYNRRCIPHGKLCDGENDCGDNSDE-LDC--KVSTCATVEFRCADGTCIPRSARCNQNI 2614
Query: 325 DCGDRSDEFNCN 336
DC D SDE NCN
Sbjct: 2615 DCADASDEKNCN 2626
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRK 316
S+C+ QF C +CI W CD +DCGDGSDE +C ++R C F C C
Sbjct: 3315 SNCTASQFRCKTDKCIPFWWKCDTVDDCGDGSDEPDDC-PEFR-CQPGRFQCGTGLCALP 3372
Query: 317 TYHCDGEDDCGDRSDEFNCN 336
+ CDGE+DCGD SDE NC+
Sbjct: 3373 AFICDGENDCGDNSDELNCD 3392
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 77/181 (42%), Gaps = 51/181 (28%)
Query: 197 TGLMNHPNNRKCDE---ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNC 253
T +NR C ++F C +K CIP W CD DC DG+DE +C
Sbjct: 3302 TNFYLAADNRTCLSNCTASQFRCKTDK------CIPFWWKCDTVDDCGDGSDEPD---DC 3352
Query: 254 PKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE----------------------- 290
P + C P +F CG G C ++CD +NDCGD SDE
Sbjct: 3353 P-EFRCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIP 3411
Query: 291 -------GKECHDKY-------RTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
+C D+ +CS + F C+ K CI K + CD + DC D SDE NC
Sbjct: 3412 VNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANC 3471
Query: 336 N 336
+
Sbjct: 3472 D 3472
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PFA++++ + +YWTD + + +A K TG N + ++++ P D+ +Y Q + N
Sbjct: 1471 HPFAVSLYGSEVYWTDWRTNTLSKANKWTGQN-VSVIQKTSAQPFDLQIYHPSRQPQAPN 1529
Query: 77 PC--NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
PC N G C+ C N +A C C KL ++ + C
Sbjct: 1530 PCAANDGKGPCSHMCLINHNRSAACACPHLMKLSSDKKTC 1569
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 9 MVLISATIYPFAITVHRNYIYWTDLQLR--GVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66
MVL + + F++ V YIYW+D V R K+ I M L + +++ ++
Sbjct: 2077 MVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKNDATETITMRTGLGVNLKEVKIF 2136
Query: 67 SADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115
+ +K N C NGGC Q C N C C L +G C+
Sbjct: 2137 NRVREK-GTNVCARDNGGCKQLCLYRGNSRRTCACAHGY-LAEDGVTCL 2183
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 20 AITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79
A+T+ ++W D L + K G N +++ + VY ++Q+ S N C
Sbjct: 1782 ALTIMDKKLWWADQNLAQLGTCSKRDGRNPT-ILRNKTSGVVHMKVYDKEAQQGS-NSCQ 1839
Query: 80 IHNGGCAQSCHPGPNGTAECKC 101
++NGGC+Q C P T C C
Sbjct: 1840 LNNGGCSQLCLPTSETTRTCMC 1861
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 49/146 (33%), Gaps = 53/146 (36%)
Query: 121 CDGSKFFCRNGKCI-SRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C +F C +G+C+ + W CDGD DC D+SDE
Sbjct: 2845 CGTEEFSCADGRCLLNTQWQCDGDFDCPDHSDE--------------------------- 2877
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
P N KC + + +CIP LCD D
Sbjct: 2878 ----------------------APLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDD 2915
Query: 240 CVDGADENTTALN---CPKQSSCSPD 262
C DG+DE +N K S CS D
Sbjct: 2916 CGDGSDERNCHINECLSKKVSGCSQD 2941
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 19 FAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY------SADSQK 72
+ ITV +Y+Y T+ + R + G ++ ++K ++ I +Y + S
Sbjct: 417 YGITVFEDYLYATNSDNYNIVRINRFNGTDIHSLIKI--ENAWGIRIYQKRTQPTVRSHA 474
Query: 73 CSVNPCNIHNGGCAQSCHPGPN-GTAECKCDESTKLVNEGRMC 114
C V+P + GGC+ C + T C+C L ++GR C
Sbjct: 475 CEVDPYGM-PGGCSHICLLSSSYKTRTCRCRTGFNLGSDGRSC 516
Score = 35.0 bits (79), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 213 EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS--SCSPDQFSC-GNG 269
EF C ++ C+ + WLCDGDPDC D +DE+ CP++ C + +C G
Sbjct: 36 EFLCHDH-----VTCVSQSWLCDGDPDCPDDSDESLDT--CPEEVEIKCPLNHIACLGTN 88
Query: 270 RCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKC--IRKTYHCDGED 324
+C++ LC+ DC DG DEG C + C ++ CQ +KC +R + C ED
Sbjct: 89 KCVHLSQLCNGVLDCPDGYDEGVHCQELLSNC--QQLNCQ-YKCTMVRNSTRCYCED 142
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 51/142 (35%)
Query: 128 CRNGK-CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPP 186
CRN + C+ C+G D+CGDNSDED +C ++T ++P
Sbjct: 3723 CRNNRICLQSEQMCNGIDECGDNSDED--HCGGKLTYKARP------------------- 3761
Query: 187 GIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE 246
C ++ EF C+ K CIP CD DC DG+DE
Sbjct: 3762 ---------------------CKKD-EFACSNKK------CIPMDLQCDRLDDCGDGSDE 3793
Query: 247 NTTALNCPKQSSCSPDQFSCGN 268
+ P + +C + CG+
Sbjct: 3794 QGCRI-APTEYTCEDNVNPCGD 3814
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE 152
C +F C N KCI CD DDCGD SDE
Sbjct: 3762 CKKDEFACSNKKCIPMDLQCDRLDDCGDGSDE 3793
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 155/343 (45%), Gaps = 87/343 (25%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY--- 66
V++ + +P+AI V +N IYW D ++RA KH+ + +E++ D+ V+
Sbjct: 955 VILDSLPHPYAIAVFKNEIYWDDWSQLSIFRASKHSRSQ-VEILASQLTGLMDMKVFYKG 1013
Query: 67 -SADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDE--STKLVNEGRM---------- 113
+A S C PC++ C P N + C+C E ++ ++ G +
Sbjct: 1014 KNAGSNACVPQPCSL-------LCLPKANNSKSCRCPEGVASSVLPSGDLMCDCPQGYQR 1066
Query: 114 ----CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPG 169
CV + TC +++ C NG CI+ +W CD D+DCGD SD
Sbjct: 1067 KNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSD------------------ 1108
Query: 170 ELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIP 229
E P TTV CD +T+F C E+ CIP
Sbjct: 1109 ERNCP------------------TTV------------CDADTQFRCQES-----GTCIP 1133
Query: 230 KKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
+ CD + DC D +DE+ ++ C D+F+C +G CI + W+CD DNDC D SD
Sbjct: 1134 LSYKCDLEDDCGDNSDESHCEMH-----QCRSDEFNCSSGMCIRSSWVCDGDNDCRDWSD 1188
Query: 290 EGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
E C Y TC + F C N CI + + CDG+ DC D SDE
Sbjct: 1189 EAN-CTAIYHTCEASNFQCHNGHCIPQRWACDGDADCQDGSDE 1230
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGV 173
C A TC+ S F C NG CI + W+CDGD DC D SDEDP C + G P G +
Sbjct: 1192 CTAIYHTCEASNFQCHNGHCIPQRWACDGDADCQDGSDEDPVSCEKKCNGFHCPNGTC-I 1250
Query: 174 PGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWL 233
P G+ P G C +F C NR QC+ +
Sbjct: 1251 PSSKHCDGLRDCPD----------GSDEQHCEPFCTRFMDFVCK-----NRQQCLFHSMV 1295
Query: 234 CDGDPDCVDGADENTTALNCPK----QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
CDG C DG+DE+ C + C F C NG CI+ W CD +DCGD SD
Sbjct: 1296 CDGIVQCRDGSDEDAAFAGCSQDPEFHKECDEFGFQCQNGVCISLIWKCDGMDDCGDYSD 1355
Query: 290 EGK-ECHDKYRTCSSE-EFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
E E + CS +F C+N CI + CD E+DCGD SDE +C
Sbjct: 1356 EANCENPTEAPNCSRYFQFHCENGHCIPNRWKCDRENDCGDWSDEKDC 1403
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 92/232 (39%), Gaps = 67/232 (28%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
CD F C+NG CIS +W CDG DDCGD SDE + P E
Sbjct: 1325 CDEFGFQCQNGVCISLIWKCDGMDDCGDYSDE----------ANCENPTEA--------- 1365
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
PN C +F C EN CIP +W CD + DC
Sbjct: 1366 ----------------------PN---CSRYFQFHC-EN-----GHCIPNRWKCDRENDC 1394
Query: 241 VDGADE------NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE---- 290
D +DE + P S+C P+ F C +G C+ W+CD DC DGSDE
Sbjct: 1395 GDWSDEKDCGDSHVLPSPTPGPSTCLPNYFHCSSGACVMGTWVCDGYRDCADGSDEEACP 1454
Query: 291 ------GKECHDKYRTCSSEEFAC-QNFKCIRKTYHCDGEDDCGDRSDEFNC 335
++ C EF C Q KCI CDG DC D DE NC
Sbjct: 1455 SLANSTAASTPTQFGQCDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEANC 1506
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
Query: 205 NRKCDEETEFTCTENKAW-NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQ 263
N C +E E TC N+ + CI W CD D DC D +DE NCP + Q
Sbjct: 1068 NNTCVKE-ENTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDER----NCPTTVCDADTQ 1122
Query: 264 FSCG-NGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDG 322
F C +G CI + CD ++DCGD SDE H + C S+EF C + CIR ++ CDG
Sbjct: 1123 FRCQESGTCIPLSYKCDLEDDCGDNSDES---HCEMHQCRSDEFNCSSGMCIRSSWVCDG 1179
Query: 323 EDDCGDRSDEFNC 335
++DC D SDE NC
Sbjct: 1180 DNDCRDWSDEANC 1192
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 89/222 (40%), Gaps = 54/222 (24%)
Query: 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQ 184
+F C NG CI W CD ++DCGD SDE C S PG
Sbjct: 1373 QFHCENGHCIPNRWKCDRENDCGDWSDEKD--CGDSHVLPSPTPG--------------- 1415
Query: 185 PPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGA 244
P + PN C + C+ W+CDG DC DG+
Sbjct: 1416 -PSTCL------------PNYFHC--------------SSGACVMGTWVCDGYRDCADGS 1448
Query: 245 DE-------NTTALNCPKQ-SSCSPDQFSCGN-GRCINTGWLCDHDNDCGDGSDEGKECH 295
DE N+TA + P Q C +F C +CI CD DC DG DE
Sbjct: 1449 DEEACPSLANSTAASTPTQFGQCDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEANCPT 1508
Query: 296 DKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNCN 336
TC+S EF C++ + CI + CDG DC D SDE C+
Sbjct: 1509 HSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDEKACS 1550
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 73/181 (40%), Gaps = 49/181 (27%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC + F C +G C+ W CDG DC D SDE+ P
Sbjct: 1418 TCLPNYFHCSSGACVMGTWVCDGYRDCADGSDEE------------------ACPSLANS 1459
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
T S P Q G +CD EF C + K +CIP CDG D
Sbjct: 1460 TAASTP---------TQFG--------QCD-RFEFECHQPK-----KCIPNWKRCDGHQD 1496
Query: 240 CVDGADENTTALNCPKQS--SCSPDQFSCGNGR-CINTGWLCDHDNDCGDGSDEGKECHD 296
C DG DE NCP S +C+ +F C +G CI CD DC D SDE K C D
Sbjct: 1497 CQDGQDEA----NCPTHSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDE-KACSD 1551
Query: 297 K 297
+
Sbjct: 1552 E 1552
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 153/343 (44%), Gaps = 87/343 (25%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY--- 66
V++ +P+AI V +N IYW D ++RA K++G+ M E++ D+ ++
Sbjct: 955 VILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQM-EILANQLTGLMDMKIFYKG 1013
Query: 67 -SADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKC--DESTKLVNEGRM---------- 113
+ S C PC++ C P N + C+C D S+ ++ G +
Sbjct: 1014 KNTGSNACVPRPCSL-------LCLPKANNSRSCRCPEDVSSSVLPSGDLMCDCPQGYQL 1066
Query: 114 ----CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPG 169
CV + TC +++ C NG CI+ +W CD D+DCGD SDE C I
Sbjct: 1067 KNNTCVKQENTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDE--RNCPTTI-------- 1116
Query: 170 ELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIP 229
CD +T+F C E+ CIP
Sbjct: 1117 --------------------------------------CDLDTQFRCQES-----GTCIP 1133
Query: 230 KKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
+ CD + DC D +DE+ ++ C D+++C +G CI + W+CD DNDC D SD
Sbjct: 1134 LSYKCDLEDDCGDNSDESHCEMH-----QCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSD 1188
Query: 290 EGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
E C Y TC + F C+N CI + + CDG+ DC D SDE
Sbjct: 1189 EAN-CTAIYHTCEASNFQCRNGHCIPQRWACDGDTDCQDGSDE 1230
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGV 173
C A TC+ S F CRNG CI + W+CDGD DC D SDEDP C + G P G +
Sbjct: 1192 CTAIYHTCEASNFQCRNGHCIPQRWACDGDTDCQDGSDEDPVNCEKKCNGFRCPNGTC-I 1250
Query: 174 PGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWL 233
P G + G C +F C NR QC+ +
Sbjct: 1251 PSSKHCDG----------LRDCSDGSDEQHCEPLCTHFMDFVCK-----NRQQCLFHSMV 1295
Query: 234 CDGDPDCVDGADENTTALNCPK----QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
CDG C DG+DE+ C + C F C NG CI+ W CD +DCGD SD
Sbjct: 1296 CDGIIQCRDGSDEDAAFAGCSQDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSD 1355
Query: 290 EGK-ECHDKYRTCSSE-EFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
E E + CS +F C+N CI + CD E+DCGD SDE +C
Sbjct: 1356 EANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDC 1403
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
CD F C+NG CIS +W CDG DDCGD SDE + P E
Sbjct: 1324 VCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDE----------ANCENPTEA-------- 1365
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
PN C +F C EN CIP +W CD + D
Sbjct: 1366 -----------------------PN---CSRYFQFRC-EN-----GHCIPNRWKCDREND 1393
Query: 240 CVDGADE------NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE--- 290
C D +DE + + P S+C P+ + C +G C+ W+CD DC DGSDE
Sbjct: 1394 CGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTCVMDTWVCDGYRDCADGSDEEAC 1453
Query: 291 -------GKECHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
+ C EF C K CI CDG DC D DE NC
Sbjct: 1454 PLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANC 1506
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 89/223 (39%), Gaps = 56/223 (25%)
Query: 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQ 184
+F C NG CI W CD ++DCGD SDE C G I S
Sbjct: 1373 QFRCENGHCIPNRWKCDRENDCGDWSDEKD--C-----------------GDSHILPFST 1413
Query: 185 P-PGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDG 243
P P + PN +C T C+ W+CDG DC DG
Sbjct: 1414 PGPSTCL------------PNYYRCSSGT--------------CVMDTWVCDGYRDCADG 1447
Query: 244 ADE-------NTTALNCPKQ-SSCSPDQFSCGNGR-CINTGWLCDHDNDCGDGSDEGKEC 294
+DE N TA + P Q C +F C + CI CD DC DG DE
Sbjct: 1448 SDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANCP 1507
Query: 295 HDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNCN 336
TC S EF C++ + CI + CDG DC D SDE C+
Sbjct: 1508 THSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDEKACS 1550
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 15/88 (17%)
Query: 255 KQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS------EEFAC 308
++++C +Q+ C NG CIN+ W CD DNDCGD SDE R C + +F C
Sbjct: 1074 QENTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDE--------RNCPTTICDLDTQFRC 1125
Query: 309 QNF-KCIRKTYHCDGEDDCGDRSDEFNC 335
Q CI +Y CD EDDCGD SDE +C
Sbjct: 1126 QESGTCIPLSYKCDLEDDCGDNSDESHC 1153
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 72/181 (39%), Gaps = 49/181 (27%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC + + C +G C+ W CDG DC D SDE+ P +
Sbjct: 1418 TCLPNYYRCSSGTCVMDTWVCDGYRDCADGSDEE------------------ACPLLANV 1459
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
T S P Q G +CD EF C + K CIP CDG D
Sbjct: 1460 TAASTP---------TQLG--------RCD-RFEFECHQPKT-----CIPNWKRCDGHQD 1496
Query: 240 CVDGADENTTALNCPKQS--SCSPDQFSCGNGR-CINTGWLCDHDNDCGDGSDEGKECHD 296
C DG DE NCP S +C +F C +G CI CD DC D SDE K C D
Sbjct: 1497 CQDGRDEA----NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE-KACSD 1551
Query: 297 K 297
+
Sbjct: 1552 E 1552
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2 SV=1
Length = 2213
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 151/338 (44%), Gaps = 77/338 (22%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY--- 66
V++ +P+AI V +N IYW D ++RA K++G+ M E++ D+ ++
Sbjct: 954 VILDRLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQM-EILASQLTGLMDMKIFYKG 1012
Query: 67 -SADSQKCSVNPCNIH---NGGCAQSCH--------PGPNGTAECKCDESTKLVNEGRMC 114
+ S C PC++ ++SC P+G C C + +L N C
Sbjct: 1013 KNTGSNACVPRPCSLLCLPRANNSKSCRCPDGVASSVLPSGDLMCDCPKGYELKNN--TC 1070
Query: 115 VAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVP 174
V + TC +++ C NG CI+ +W CD D+DCGD SDE C I
Sbjct: 1071 VKEEDTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDE--KNCPTTI------------- 1115
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLC 234
CD +T+F C E+ CIP + C
Sbjct: 1116 ---------------------------------CDLDTQFRCQES-----GTCIPLSYKC 1137
Query: 235 DGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC 294
D + DC D +DE ++ C D+++C +G CI + W+CD DNDC D SDE C
Sbjct: 1138 DLEDDCGDNSDERHCEMH-----QCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEAN-C 1191
Query: 295 HDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
Y TC + F C+N CI + + CDG+ DC D SDE
Sbjct: 1192 TAIYHTCEASNFQCRNGHCIPQRWACDGDADCQDGSDE 1229
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 103/228 (45%), Gaps = 22/228 (9%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGV 173
C A TC+ S F CRNG CI + W+CDGD DC D SDEDP C + G P G +
Sbjct: 1191 CTAIYHTCEASNFQCRNGHCIPQRWACDGDADCQDGSDEDPANCEKKCNGFRCPNGTC-I 1249
Query: 174 PGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWL 233
P G+ G C +F C NR QC+ +
Sbjct: 1250 PSTKHCDGLHD----------CSDGSDEQHCEPLCTRFMDFVCK-----NRQQCLFHSMV 1294
Query: 234 CDGDPDCVDGADENTTALNCPK----QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
CDG C DG+DE+ C + C F C NG CI+ W CD +DCGD SD
Sbjct: 1295 CDGIIQCRDGSDEDPAFAGCSRDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSD 1354
Query: 290 EGK-ECHDKYRTCSSE-EFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
E E + CS +F C N CI + CD E+DCGD SDE +C
Sbjct: 1355 EANCENPTEAPNCSRYFQFRCDNGHCIPNRWKCDRENDCGDWSDEKDC 1402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 90/233 (38%), Gaps = 67/233 (28%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
CD F C+NG CIS +W CDG DDCGD SDE + P E
Sbjct: 1323 VCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDE----------ANCENPTEA-------- 1364
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
PN C +F C + CIP +W CD + D
Sbjct: 1365 -----------------------PN---CSRYFQFRC------DNGHCIPNRWKCDREND 1392
Query: 240 CVDGADE------NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE--- 290
C D +DE + P S+C P+ + CG G C+ W+CD DC DGSDE
Sbjct: 1393 CGDWSDEKDCGDSHVLPSTTPAPSTCLPNYYRCGGGACVIDTWVCDGYRDCADGSDEEAC 1452
Query: 291 -------GKECHDKYRTCSSEEFAC-QNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ C EF C Q KCI CDG DC D DE NC
Sbjct: 1453 PSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQDCQDGQDEANC 1505
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 87/222 (39%), Gaps = 54/222 (24%)
Query: 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQ 184
+F C NG CI W CD ++DCGD SDE C HV +
Sbjct: 1372 QFRCDNGHCIPNRWKCDRENDCGDWSDEKD--CG---------------DSHVLPSTTPA 1414
Query: 185 PPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGA 244
P + PN +C C+ W+CDG DC DG+
Sbjct: 1415 PSTCL-------------PNYYRC--------------GGGACVIDTWVCDGYRDCADGS 1447
Query: 245 DE-------NTTALNCPKQ-SSCSPDQFSCGN-GRCINTGWLCDHDNDCGDGSDEGKECH 295
DE N TA + P Q C +F C +CI CD DC DG DE
Sbjct: 1448 DEEACPSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQDCQDGQDEANCPT 1507
Query: 296 DKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNCN 336
TC S EF C++ + CI + CDG DC D SDE C+
Sbjct: 1508 HSTLTCMSWEFKCEDGEACIVLSERCDGFLDCSDESDEKACS 1549
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 255 KQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSE-EFACQNF-K 312
++ +C +Q+ C NG CIN+ W CD DNDCGD SDE K C C + +F CQ
Sbjct: 1073 EEDTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDE-KNCPTT--ICDLDTQFRCQESGT 1129
Query: 313 CIRKTYHCDGEDDCGDRSDEFNC 335
CI +Y CD EDDCGD SDE +C
Sbjct: 1130 CIPLSYKCDLEDDCGDNSDERHC 1152
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 152/376 (40%), Gaps = 110/376 (29%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY--- 66
V++ + +P+AI V +N IYW D ++RA K++G+ M +V RL D+ ++
Sbjct: 862 VILDSLPHPYAIAVFKNEIYWNDWSQLSIFRASKNSGSRMETLVGRLY-GIMDMKIFYRG 920
Query: 67 -SADSQKCSVNPCNI-----HNGGCAQSCHPG------PNGTAECKCDESTKLVNEGRMC 114
+ C +PC++ N G + C G P+G +C C + N C
Sbjct: 921 KTTGQNACIAHPCSLLCLPKSNNGRSCKCPEGVSSTVLPSGEVKCDCPHGYSMKNN--TC 978
Query: 115 VAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVP 174
V + TC +++ C NG CI+ +W CD ++DCGD SDE P
Sbjct: 979 VKEENTCLPNQYRCFNGNCINSIWQCDNNNDCGDMSDEK------------------NCP 1020
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLC 234
TTV CD ET+F C E+ CIP + C
Sbjct: 1021 ------------------TTV------------CDAETQFRCRES-----GTCIPLSYKC 1045
Query: 235 DGDPDCVDGADEN-----------------------------------TTALNCPKQSSC 259
D + DC D +DE+ + NC +C
Sbjct: 1046 DLEDDCGDNSDESHCEAHQCRKDEFSCSSGMCIRLSWRCDDDNDCRDWSDEANCTMFRTC 1105
Query: 260 SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYH 319
F C NG CI W CD D DC DGSDE +K C+ F C N CI + H
Sbjct: 1106 EASSFQCLNGHCIPQRWACDGDADCQDGSDEDPTICEK--KCNG--FQCPNGTCISTSKH 1161
Query: 320 CDGEDDCGDRSDEFNC 335
C+G DC D SDE +C
Sbjct: 1162 CNGITDCADASDEQDC 1177
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 89/233 (38%), Gaps = 67/233 (28%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TCD F C NG CIS +W CDG DDCGD SDE
Sbjct: 1231 TCDQFSFQCANGVCISLVWKCDGMDDCGDYSDE--------------------------- 1263
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
N + C +F C CIP +W CDG+ D
Sbjct: 1264 -----------------ASCENPTDAPTCSRYYQFQC------GNGHCIPNQWKCDGEND 1300
Query: 240 CVDGADEN------TTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK- 292
C D +DE + +C P+ F CG+G CI W+CD DC DGSDE
Sbjct: 1301 CGDWSDEKECEGSPLLPITTAVPPTCLPNHFRCGSGACITNSWVCDGYRDCADGSDEDAC 1360
Query: 293 -ECHDKYRT--------CSSEEFACQNF-KCIRKTYHCDGEDDCGDRSDEFNC 335
H + CS EF CQ KCI CDG DC D +DE +C
Sbjct: 1361 PTSHPNVTSSPPAPRGRCSRTEFECQQLHKCIPNWKRCDGRRDCQDGTDERSC 1413
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 156/348 (44%), Gaps = 49/348 (14%)
Query: 18 PFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQK----- 72
P AIT+ YIY+ + + R K G ++V+ R I A S +
Sbjct: 935 PVAITIMNEYIYYVHQRPYSIRRVHKKNGGGS-KIVREFGADERSIFSLKACSHQNQPIP 993
Query: 73 --CSVNPCNIHNGGCAQSCHPGPNGT------AECKCDESTKLVNEGRMCVAKN------ 118
+PC C Q C P+ + A+C C + + E K+
Sbjct: 994 DDSREHPCRASQ--CTQLCFATPSESHPNELEAKCACRQGFMINKENNHSCQKDPAEKIE 1051
Query: 119 --ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSD---EDPNYCNVQI----TGVSQPPG 169
+ + ++F C+NG+CI + W CDG++DC D SD E + C + +
Sbjct: 1052 QLCSSNSTQFQCKNGRCIPKEWKCDGENDCLDESDEIDEKGDKCFHETECAENTIKCRNT 1111
Query: 170 ELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW-NRAQCI 228
+ +P G + G + + + C + + C K + +CI
Sbjct: 1112 KKCIPAQYGCDGDND------------CGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCI 1159
Query: 229 PKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGS 288
P++W CD D DC DG+DE L ++C+ +QFSC NGRCI WLCD DNDC DG+
Sbjct: 1160 PEQWKCDSDNDCGDGSDEK---LEMCGNATCAANQFSCANGRCIPIYWLCDGDNDCYDGT 1216
Query: 289 DEGKECHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
DE KE + CS+ +F C N + C+ HCDG+ DC D SDE +C
Sbjct: 1217 DEDKERCPPVQ-CSALQFRCANGRQCVPLRNHCDGQSDCEDGSDEDSC 1263
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 102/223 (45%), Gaps = 51/223 (22%)
Query: 115 VAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVP 174
K I F C N KCISR + CDG+DDCGD SDE +
Sbjct: 3001 AGKKICVGDYLFQCDNLKCISRAFICDGEDDCGDGSDEHSRH------------------ 3042
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENK--AWNRAQCIPKKW 232
NR C ++ EF CT N A + +CIP+ W
Sbjct: 3043 ---------------------------GCGNRTCTDQ-EFHCTSNAKLAQPKYECIPRAW 3074
Query: 233 LCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK 292
LCDGD C G DE+T K+ C+ +F C N CI++ W CD DNDC DGSDE
Sbjct: 3075 LCDGDVTCAGGEDESTELCKTEKK-ECNKGEFRCSNQHCIHSTWECDGDNDCLDGSDEHA 3133
Query: 293 ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C Y +C + F C N KC+ ++ CDG DDC D SDE +C
Sbjct: 3134 NC--TYSSCQPDFFQCANHKCVPNSWKCDGNDDCEDGSDEKDC 3174
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 103/216 (47%), Gaps = 56/216 (25%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV 177
N TC ++F C NG+CI W CDGD+DC D +DED C PP V
Sbjct: 1184 NATCAANQFSCANGRCIPIYWLCDGDNDCYDGTDEDKERC---------PP--------V 1226
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
Q + + +F C N QC+P + CDG
Sbjct: 1227 QCSAL------------------------------QFRCA-----NGRQCVPLRNHCDGQ 1251
Query: 238 PDCVDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
DC DG+DE++ A+ SC+PDQF C +G CI W CD DC DGSDE K
Sbjct: 1252 SDCEDGSDEDSCAVT---AESCTPDQFKCVSSGLCIPASWKCDGQQDCDDGSDEPKFGCT 1308
Query: 297 KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
R CSS++F C N +CI + CDGE+DCGD SDE
Sbjct: 1309 SGRQCSSDQFKCGNGRCILNNWLCDGENDCGDGSDE 1344
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 152/403 (37%), Gaps = 78/403 (19%)
Query: 6 GASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65
G + T + ++ V +Y+YW D LR V R +K TG N ++K+ P D+ +
Sbjct: 3515 GRRHIPAQRTSHVSSMVVFDDYLYWADWNLREVLRCDKWTGKNET-ILKKTVQLPNDLRI 3573
Query: 66 YSADSQKCSVNPCNIHNGGCAQSCHPGPNGTA-ECKCDESTKLVNEGRMC---------- 114
Q NPC +NGGC+ C G G C C + L+++ + C
Sbjct: 3574 VHPMRQPAYPNPCGDNNGGCSHLCLIGAGGNGYTCSCPDQFVLLSDQKTCEPNCTERQFA 3633
Query: 115 --------VAKNITCDGS-----------------------KFFCRNGKCISRMWSCDGD 143
+ K CDG +F C N C CDG+
Sbjct: 3634 CGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRPFQICDGN 3693
Query: 144 DDCGDNSDE-------DPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQ 196
DDCGD+SDE DP TG P + + M
Sbjct: 3694 DDCGDSSDEQNCDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNC 3753
Query: 197 TGLMNHPNNRKC-----------------DEETEFTCTE-NKAWNR----AQCIPKKWLC 234
T NN KC DE E E K W R +CIP C
Sbjct: 3754 TAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFC 3813
Query: 235 DGDPDCVDGADENTTALNCPKQSSCSPDQFSCG-NGRCINTGWLCDHDNDCGDGSDE-GK 292
+G DC D +DE+ CP +F C +G+CI W+CD +NDCGD SDE
Sbjct: 3814 NGQDDCRDNSDEDKQ--RCPTCDDVG--EFRCATSGKCIPRRWMCDTENDCGDNSDELDA 3869
Query: 293 ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C R CS EF C + KCI + CDG C D DE C
Sbjct: 3870 SCGGTTRPCSESEFRCNDGKCIPGSKVCDGTIQCSDGLDESQC 3912
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 118/262 (45%), Gaps = 59/262 (22%)
Query: 122 DGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG-------- 172
D +F C +GKCI R W CD ++DCGDNSDE C G ++P E
Sbjct: 3835 DVGEFRCATSGKCIPRRWMCDTENDCGDNSDELDASCG----GTTRPCSESEFRCNDGKC 3890
Query: 173 VPGHVQITGVSQ-PPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW--------- 222
+PG G Q G+ T++ L P +R+CD+ T C W
Sbjct: 3891 IPGSKVCDGTIQCSDGLDESQCTLRRCL---PGHRQCDDGT---CIAEHKWCDRKKDCPN 3944
Query: 223 ----------------------NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCS 260
+ CIP+K++CDGD DC D +DE T+ C
Sbjct: 3945 AADELHCEDVSRRTCSPFEFECANSVCIPRKFMCDGDNDCGDNSDE--TSSECRSAQCDP 4002
Query: 261 PDQFSCGNGR-CINTGWLCDHDNDCG--DGSDEGKE---CHDKYRTCSSEEFACQNFKCI 314
P +F C + R C+N LC+ NDCG D SDE +Y CSS++F C N KC+
Sbjct: 4003 PLRFRCAHSRLCLNILQLCNGFNDCGPNDFSDEHLSMCSSFSEYGDCSSDQFKCANGKCV 4062
Query: 315 RKTYHCDGEDDCGDRSDEFNCN 336
T CD +DDCGD SDE C+
Sbjct: 4063 NGTVACDRKDDCGDASDEIGCS 4084
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 140/357 (39%), Gaps = 87/357 (24%)
Query: 6 GASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVK--------RLE 57
G + +I++ ++ + ++Y +D GV+R +K +G+ + +V R+
Sbjct: 2652 GQNRKVIASGYRAKSLDIWDRWLYMSDPLSNGVFRIDKESGSGLENVVSDRRIPGALRVF 2711
Query: 58 DSPRDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPN------GTAECKCDESTKLVNEG 111
S D+ + + C NGGC Q C + +C C+++ +LV E
Sbjct: 2712 ASESDVRTRNQVCNALTSQLCKTDNGGCDQLCTVVADDIGLAASKVQCSCNDTYELVQEP 2771
Query: 112 -----RMCVAKNITCDGSK-------FFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNV 159
CV + + +K F C +G CI +CD DC D SDE+PNYC
Sbjct: 2772 GKDYPTQCVLRGSNSEPAKECLPPYNFQCGDGSCILLGATCDSKPDCADASDENPNYC-- 2829
Query: 160 QITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTEN 219
N R C E+ CT
Sbjct: 2830 --------------------------------------------NTRSCPEDYNL-CTNR 2844
Query: 220 KAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCD 279
+ CI C+ DC DG+DE L+CP +C+ F C NG CIN +CD
Sbjct: 2845 R------CIDSAKKCNHIDDCGDGSDE----LDCPSAVACAEGTFPCSNGHCINQTKVCD 2894
Query: 280 HDNDCGDG--SDEG-KECHDKYRTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDE 332
NDC D SDE C C + C N CI+ CDG DDCGD++DE
Sbjct: 2895 GHNDCHDEQVSDESLATCPGLPIDCRGVKVRCPNTNICIQPADLCDGYDDCGDKADE 2951
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C+ + F C +GKCI W CDG DC D ED C Q + V
Sbjct: 52 VCNENDFRCNDGKCIRTEWKCDGSGDCSDG--EDEKDCPHPGCKSDQWQCDTYTWHSVSC 109
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
Q + + C + F C + + QC CDG D
Sbjct: 110 IAEYQRCDNITDCADGSDEKDCPASTVDCSSQNVFMCADGR-----QCFDVSKKCDGKYD 164
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKECHDKY 298
C D +DE + ++C QF C + +CI W+CD DC DGSDE C ++
Sbjct: 165 CRDLSDEKDSCSR--NHTACFQYQFRCADKTQCIQKSWVCDGSKDCADGSDEPDTC--EF 220
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ C++ EF C+N +C + + CD DDCGD SDE C
Sbjct: 221 KKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSDEDEC 257
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDN--SDEDPNYCNVQITGVSQPPGELGVPGH 176
+ C F C NG CI++ CDG +DC D SDE C G+P
Sbjct: 2872 VACAEGTFPCSNGHCINQTKVCDGHNDCHDEQVSDESLATCP-------------GLPID 2918
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN-----RAQCIPKK 231
+ V P + + + + K DE F + A + +CIP+
Sbjct: 2919 CRGVKVRCPNTNICIQPADLCDGYDDCGD-KADENQLFCMNQQCAQHYVRCPSGRCIPET 2977
Query: 232 WLCDGDPDCVDGADE-NTTALNCPKQSSCSPDQ-FSCGNGRCINTGWLCDHDNDCGDGSD 289
W CDGD DC DG DE +T + + C D F C N +CI+ ++CD ++DCGDGSD
Sbjct: 2978 WQCDGDNDCSDGWDETHTNCTDTAGKKICVGDYLFQCDNLKCISRAFICDGEDDCGDGSD 3037
Query: 290 EGKECHDKYRTCSSEEFACQN--------FKCIRKTYHCDGEDDCGDRSDE 332
E RTC+ +EF C + ++CI + + CDG+ C DE
Sbjct: 3038 EHSRHGCGNRTCTDQEFHCTSNAKLAQPKYECIPRAWLCDGDVTCAGGEDE 3088
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 94/241 (39%), Gaps = 68/241 (28%)
Query: 102 DESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQI 161
DEST+L C + C+ +F C N CI W CDGD+DC D SDE
Sbjct: 3087 DESTEL------CKTEKKECNKGEFRCSNQHCIHSTWECDGDNDCLDGSDE--------- 3131
Query: 162 TGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKA 221
H T S P F C +K
Sbjct: 3132 --------------HANCTYSSCQPDF-------------------------FQCANHK- 3151
Query: 222 WNRAQCIPKKWLCDGDPDCVDGADEN---TTALNCPKQSSCSPDQFSCGNGRCINTGWLC 278
C+P W CDG+ DC DG+DE + + K S CS QF C +G CI+ +C
Sbjct: 3152 -----CVPNSWKCDGNDDCEDGSDEKDCPKNSASAQKASKCSNGQFQCTSGECIDDAKVC 3206
Query: 279 DHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKC--IRKTYHCD-GEDDCGDRSDEFNC 335
D + DC D SDE C CS E KC ++ Y CD E D SD+ +C
Sbjct: 3207 DRNFDCTDRSDESSLCF--IDECSLAEKPLCEQKCMDMKIGYKCDCFEGFAIDISDQKSC 3264
Query: 336 N 336
+
Sbjct: 3265 H 3265
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 223 NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDN 282
++ QCI K W+CDG DC DG+DE T + C+ ++F C N RC + CD+ +
Sbjct: 191 DKTQCIQKSWVCDGSKDCADGSDEPDTC----EFKKCTANEFQCKNKRCQPRKFRCDYYD 246
Query: 283 DCGDGSDEGKECHDKYRTCSSEEFACQNF-KCIRKTYHCDGEDDCGDRSDEFNCN 336
DCGD SDE EC + YR C ++ C CI + CDG DC D +DE C+
Sbjct: 247 DCGDNSDE-DECGE-YR-CPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCS 298
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 240 CVDGADENTTALNCPKQ-----------SSCSPDQFSCG--NGRCINTGWLCDHDNDCGD 286
C+ GA N +CP Q +C+ QF+CG + +CI W CD + DC D
Sbjct: 3597 CLIGAGGNGYTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIPKLWYCDGEPDCRD 3656
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
GSDE E R C EF C N C R CDG DDCGD SDE NC+
Sbjct: 3657 GSDEPGESICGQRICPVGEFQCTNHNCTRPFQICDGNDDCGDSSDEQNCD 3706
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 254 PKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKC 313
P + P F CG+G CI G CD DC D SDE + R+C + C N +C
Sbjct: 2788 PAKECLPPYNFQCGDGSCILLGATCDSKPDCADASDENPN-YCNTRSCPEDYNLCTNRRC 2846
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I C+ DDCGD SDE +C
Sbjct: 2847 IDSAKKCNHIDDCGDGSDELDC 2868
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNF----- 311
S C+ + F C +G+CI T W CD DC DG DE K+C + C S+++ C +
Sbjct: 51 SVCNENDFRCNDGKCIRTEWKCDGSGDCSDGEDE-KDC--PHPGCKSDQWQCDTYTWHSV 107
Query: 312 KCIRKTYHCDGEDDCGDRSDEFNC 335
CI + CD DC D SDE +C
Sbjct: 108 SCIAEYQRCDNITDCADGSDEKDC 131
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 79/208 (37%), Gaps = 66/208 (31%)
Query: 114 CVAKNITCDGSKFFC-RNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG 172
C +C +F C +G CI W CDG DC D SDE C
Sbjct: 1263 CAVTAESCTPDQFKCVSSGLCIPASWKCDGQQDCDDGSDEPKFGCT-------------- 1308
Query: 173 VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKW 232
+ R+C + +F C +CI W
Sbjct: 1309 -------------------------------SGRQCSSD-QFKC------GNGRCILNNW 1330
Query: 233 LCDGDPDCVDGADENT-----TALNCPKQSSCSPDQFSCGNGR--CINTGWLCDHDNDCG 285
LCDG+ DC DG+DE++ T++N K C + +C N + CI LCD C
Sbjct: 1331 LCDGENDCGDGSDESSERGCKTSMNARK---CPFEHVACENDQETCIPLHQLCDGKTHCP 1387
Query: 286 DGSDEGKECHDKYRTCSSEEFACQNFKC 313
G+DEG C CS++ C +FKC
Sbjct: 1388 GGTDEGGRCARDL--CSADRAGC-SFKC 1412
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 70/186 (37%), Gaps = 61/186 (32%)
Query: 107 LVNEGRMCVAKNITCDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVS 165
L +E C + C +F C + +CI + W CDG DC D SDE P+ C
Sbjct: 168 LSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCADGSDE-PDTCEF------ 220
Query: 166 QPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRA 225
+KC EF C +
Sbjct: 221 ----------------------------------------KKC-TANEFQCKNKR----- 234
Query: 226 QCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDC 284
C P+K+ CD DC D +DE+ + C P +++C G G CI+ LCD DC
Sbjct: 235 -CQPRKFRCDYYDDCGDNSDEDECG-----EYRCPPGKWNCPGTGHCIDQLKLCDGSKDC 288
Query: 285 GDGSDE 290
DG+DE
Sbjct: 289 ADGADE 294
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 54/145 (37%), Gaps = 58/145 (40%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C ++F C+N +C R + CD DDCGDNSDED + PPG+ PG T
Sbjct: 223 CTANEFQCKNKRCQPRKFRCDYYDDCGDNSDED------ECGEYRCPPGKWNCPG----T 272
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
G CI + LCDG DC
Sbjct: 273 G--------------------------------------------HCIDQLKLCDGSKDC 288
Query: 241 VDGADENTTALN-CPK---QSSCSP 261
DGADE + N CP Q+ C P
Sbjct: 289 ADGADEQQCSQNLCPSLGCQAGCHP 313
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 72/202 (35%), Gaps = 67/202 (33%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C +F C NG+CI W CDG++DCGD SDE
Sbjct: 1313 CSSDQFKCGNGRCILNNWLCDGENDCGDGSDE---------------------------- 1344
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+ + G N RKC E EN ++ CIP LCDG C
Sbjct: 1345 -------------SSERGCKTSMNARKC--PFEHVACEN---DQETCIPLHQLCDGKTHC 1386
Query: 241 VDGADENTTALNCPKQSSCSPDQ----FSCGN-----------GRCINTGWLCDHDNDCG 285
G DE + CS D+ F C N G + C+ +N+C
Sbjct: 1387 PGGTDEGGRC----ARDLCSADRAGCSFKCHNSPNGPICSCPFGEQLVNKTKCEPENECL 1442
Query: 286 DGSDEGKECHDKYR--TCSSEE 305
D S + C D+ TCS +E
Sbjct: 1443 DSSSCSQRCKDEKHGFTCSCDE 1464
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 4 ATGASMVLISATIYPFA-ITVHRNYIYWTDLQLRGVYRA-EKHTGANMIEMVKRLEDSPR 61
+TG + L+ + I A + +H +YWTD +L ++RA K +++ + S +
Sbjct: 2321 STGGTPELVRSDIASAAGVALHGQNMYWTDNRLEKLFRATSKPNQTSLLLSPTTVAASLK 2380
Query: 62 DI---HVYSADSQKCSVNPC----NIHNGGCAQSCHPGP-NGTAECKCDESTKLVNEGRM 113
DI V+S+++Q + +PC N+ C Q C P T C C + V +GR
Sbjct: 2381 DIGDVAVFSSNNQPRASSPCQITDNLRKSPCTQLCFATPGTQTPTCSC---ARGVLKGRT 2437
Query: 114 C 114
C
Sbjct: 2438 C 2438
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 18 PFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLED--SPRDIHVYSADSQKCSV 75
P+A+ V N+IYW + + +Y +K + + LED + R Y+ D+Q+ +V
Sbjct: 4420 PYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDGHTVRVSQKYAKDTQR-TV 4478
Query: 76 NPCNIHNGGCAQSCHPGPNGTAECKC 101
+ C C+ C P+ C C
Sbjct: 4479 SGC--ERAQCSHLCVSLPSTGFACLC 4502
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 12 ISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDS--PRDIHVYSAD 69
++ +PF + + Y+YWTD GV + EK G++ + E++ P I Y
Sbjct: 596 MNVVPHPFGLALFDQYLYWTDWTRLGVIQVEKF-GSDTKLLWSNTENNVFPMGISAYHPM 654
Query: 70 SQ------KCSV----NPCNIHN--GGCAQSCHPGPNGTA-ECKCDESTKLVNEGRMCV 115
+Q +C NPC + G C S G G +C C KLVN G+ C+
Sbjct: 655 AQPGPGQSECLAMKIENPCTNADCEGMCILSKDNGGFGVGYKCACPIGQKLVN-GKRCI 712
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 4 ATGASMVLISATI--YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKR-LEDSP 60
+G + VL S+ +P A+ + + +Y++D +L+ + K+ E +
Sbjct: 1674 GSGRTQVLASSKFVQHPHALAIFEDMMYYSDRRLQKLQVYPKYPNGTTSEYPSHTFSKAL 1733
Query: 61 RDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115
+ V+ NPC+ + C+ C T CKC KL G+ C+
Sbjct: 1734 GVVAVHPVLQPVIKNNPCSTN--PCSHLCLLNNKNTFTCKCPMGEKLDASGKKCI 1786
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 68 ADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKL 107
AD Q+CS N C + GC CHP P+G EC C KL
Sbjct: 292 ADEQQCSQNLC--PSLGCQAGCHPSPHG-GECTCPSGYKL 328
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 114 bits (284), Expect = 1e-24, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 121 CDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL----GVPG 175
C ++F C + +C++ + CD DC D SDE C + G+S L +P
Sbjct: 199 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDE--LNCEEPVLGISPTFSLLVETTSLPP 256
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCD 235
+ T + QPP V Q L C + A CIP+ +LCD
Sbjct: 257 RPETTIMRQPP----VTHAPQPLLPGSVRPLPCG-------PQEAACRNGHCIPRDYLCD 305
Query: 236 GDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECH 295
G DC DG+DE L+C C P++F CGNG C W CD D DC D +DE C
Sbjct: 306 GQEDCEDGSDE----LDCGPPPPCEPNEFPCGNGHCALKLWRCDGDFDCEDRTDEAN-CP 360
Query: 296 DKY--RTCSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEFNC 335
K C +F C + CI ++HCD E DC DRSDEF C
Sbjct: 361 TKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGC 403
Score = 68.9 bits (167), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 66/178 (37%), Gaps = 62/178 (34%)
Query: 117 KNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGH 176
+ + C + CRNG CI R + CDG +DC D SDE + G P
Sbjct: 281 RPLPCGPQEAACRNGHCIPRDYLCDGQEDCEDGSDEL----------------DCGPP-- 322
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
PP C E EF C C K W CDG
Sbjct: 323 --------PP---------------------C-EPNEFPC------GNGHCALKLWRCDG 346
Query: 237 DPDCVDGADENTTALNCPK---QSSCSPDQFSC-GNGRCINTGWLCDHDNDCGDGSDE 290
D DC D DE NCP + C P QF C CI + CD ++DC D SDE
Sbjct: 347 DFDCEDRTDE----ANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 400
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 299 RTCSSEEFACQNF-KCIRKTYHCDGEDDCGDRSDEFNC 335
R C+ EFAC ++ +C+ Y CD DC D SDE NC
Sbjct: 197 RACTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNC 234
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 110/254 (43%), Gaps = 98/254 (38%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C+ +F C+NG CI +W CDGD+DCGDNSDE C++
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDEQ---CDM--------------------- 145
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
RKC ++ EF C++ CI + W CDGD DC
Sbjct: 146 -------------------------RKCSDK-EFRCSD------GSCIAEHWYCDGDTDC 173
Query: 241 VDGADENT--TAL-------------------------------------NCPKQSSCSP 261
DG+DE + +A+ +C C
Sbjct: 174 KDGSDEESCPSAVPSPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRS 233
Query: 262 DQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCD 321
+F C +G CIN+GW CD D DC D SDE + C C++E+F C++ +C+R ++ CD
Sbjct: 234 GEFMCDSGLCINSGWRCDGDADCDDQSDE-RNC--TTSMCTAEQFRCRSGRCVRLSWRCD 290
Query: 322 GEDDCGDRSDEFNC 335
GEDDC D SDE NC
Sbjct: 291 GEDDCADNSDEENC 304
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
+ FTC + A CIP +W CDGD DC D +DE+ L +CSP F C NG+
Sbjct: 29 RSHFTCAVS-ALGECTCIPAQWQCDGDNDCGDHSDEDGCTL-----PTCSPLDFHCDNGK 82
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRS 330
CI W+CD DNDC D SDE ++C R C +EF CQN CIR +HCDG++DCGD S
Sbjct: 83 CIRRSWVCDGDNDCEDDSDE-QDC--PPRECEEDEFPCQNGYCIRSLWHCDGDNDCGDNS 139
Query: 331 DE 332
DE
Sbjct: 140 DE 141
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG----VPGH 176
C +F C +G CI+ W CDGD DC D SDE+ C + V PP L G
Sbjct: 148 CSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEES--CP---SAVPSPPCNLEEFQCAYGR 202
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
+ + ++ +H R EF C + CI W CDG
Sbjct: 203 CILDIYHCDGDDDCGDWSDESDCSSHQPCRS----GEFMC------DSGLCINSGWRCDG 252
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC D +DE NC S C+ +QF C +GRC+ W CD ++DC D SDE +
Sbjct: 253 DADCDDQSDER----NC-TTSMCTAEQFRCRSGRCVRLSWRCDGEDDCADNSDEENCENT 307
Query: 297 KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C+S++F C N +CI + C+G +DCGD SDE
Sbjct: 308 GSPQCASDQFLCWNGRCIGQRKLCNGINDCGDSSDE 343
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 95/219 (43%), Gaps = 64/219 (29%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC F C NGKCI R W CDGD+DC D+SDE
Sbjct: 70 TCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQ-------------------------- 103
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
PP R+C EE EF C CI W CDGD D
Sbjct: 104 ---DCPP-------------------REC-EEDEFPC------QNGYCIRSLWHCDGDND 134
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
C D +DE CS +F C +G CI W CD D DC DGSDE + C
Sbjct: 135 CGDNSDEQC------DMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDE-ESCPSAVP 187
Query: 300 T--CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
+ C+ EEF C +CI YHCDG+DDCGD SDE +C+
Sbjct: 188 SPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCS 226
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
L+S +P+ +T+ +YIYWTD Q R ++RA+K TG+N+I + L P + + + D
Sbjct: 1247 TLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNL---PGLMDIQAVD 1303
Query: 70 -SQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+Q N C NGGC+ C P P+G + C C +L + + C
Sbjct: 1304 RAQPLGFNKCGSRNGGCSHLCLPRPSGFS-CACPTGIQLKGDRKTC 1348
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 258 SCSPDQFSC-----GNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFK 312
+C F+C G CI W CD DNDCGD SDE C TCS +F C N K
Sbjct: 26 ACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDG-C--TLPTCSPLDFHCDNGK 82
Query: 313 CIRKTYHCDGEDDCGDRSDEFNC 335
CIR+++ CDG++DC D SDE +C
Sbjct: 83 CIRRSWVCDGDNDCEDDSDEQDC 105
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 10 VLISATI-YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
VLI + + +PF +T++ IYWTD Q + + A++ TG + + + LE+ DIHV+
Sbjct: 939 VLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENL-MDIHVFHR 997
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTA-ECKCDESTKLVNEGRMC 114
+ C + NGGC+ C PN + C C L+ +G+ C
Sbjct: 998 QRPPVTT-LCAVENGGCSHLCLRSPNPSGFSCTCPTGINLLRDGKTC 1043
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
V+ +PFAITV + +YWTD + + A K TG N E+++ P DIH
Sbjct: 635 VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ-EIIRNKLHFPMDIHTLHPQ 693
Query: 70 SQKCSVNPCNIHNGGCAQSCHP-GPNGTAECKCDESTKLVN 109
Q N C +NGGC C P G N T C C + +N
Sbjct: 694 RQPAGKNRCGDNNGGCTHLCLPSGQNYT--CACPTGFRKIN 732
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPKQSS--CSPDQFSCGNGRCINTGWLCDHDN 282
+C+ W CDG+ DC D +DE NC S C+ DQF C NGRCI LC+ N
Sbjct: 280 GRCVRLSWRCDGEDDCADNSDEE----NCENTGSPQCASDQFLCWNGRCIGQRKLCNGIN 335
Query: 283 DCGDGSDEGKECHDKYRT 300
DCGD SDE + + + RT
Sbjct: 336 DCGDSSDESPQQNCRPRT 353
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
VL+S +PFA+T +IYWTD Q + + R +K++G N ++ +E DI V S
Sbjct: 1551 VLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVE-GLMDIIVVSPQ 1609
Query: 70 SQKCSVNPCNIHNGGCAQSC 89
Q N C ++NGGC C
Sbjct: 1610 RQT-GTNACGVNNGGCTHLC 1628
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDP 154
C +F C NG+CI + C+G +DCGD+SDE P
Sbjct: 312 CASDQFLCWNGRCIGQRKLCNGINDCGDSSDESP 345
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 133 CISRMWSCDGDDDCGDNSDED 153
CI W CDGD+DCGD+SDED
Sbjct: 44 CIPAQWQCDGDNDCGDHSDED 64
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
CN++NGGCAQ C G +C C +L +GR C
Sbjct: 358 CNVNNGGCAQKCQM-VRGAVQCTCHTGYRLTEDGRTC 393
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 109/254 (42%), Gaps = 98/254 (38%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C+ +F C+NG CI +W CDGD+DCGDNSDE C++
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDEQ---CDM--------------------- 145
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
RKC ++ EF C++ CI + W CDGD DC
Sbjct: 146 -------------------------RKCSDK-EFRCSD------GSCIAEHWYCDGDTDC 173
Query: 241 VDGADENT--TAL-------------------------------------NCPKQSSCSP 261
DG+DE + +A+ +C C
Sbjct: 174 KDGSDEESCPSAVPSPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRS 233
Query: 262 DQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCD 321
+F C +G C+N GW CD D DC D SDE + C C++E+F C++ +C+R ++ CD
Sbjct: 234 GEFMCDSGLCVNAGWRCDGDADCDDQSDE-RNC--TTSMCTAEQFRCRSGRCVRLSWRCD 290
Query: 322 GEDDCGDRSDEFNC 335
GEDDC D SDE NC
Sbjct: 291 GEDDCADNSDEENC 304
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
+ FTC + A CIP +W CDGD DC D +DE+ L +CSP F C NG+
Sbjct: 29 RSHFTCAVS-ALGECTCIPAQWQCDGDNDCGDHSDEDGCTL-----PTCSPLDFHCDNGK 82
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRS 330
CI W+CD DNDC D SDE ++C R C +EF CQN CIR +HCDG++DCGD S
Sbjct: 83 CIRRSWVCDGDNDCEDDSDE-QDC--PPRECEEDEFPCQNGYCIRSLWHCDGDNDCGDNS 139
Query: 331 DE 332
DE
Sbjct: 140 DE 141
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG----VPGH 176
C +F C +G CI+ W CDGD DC D SDE+ C + V PP L G
Sbjct: 148 CSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEES--CP---SAVPSPPCNLEEFQCAYGR 202
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
+ + ++ +H R EF C + C+ W CDG
Sbjct: 203 CILDIYHCDGDDDCGDWSDESDCSSHQPCRS----GEFMC------DSGLCVNAGWRCDG 252
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
D DC D +DE NC S C+ +QF C +GRC+ W CD ++DC D SDE +
Sbjct: 253 DADCDDQSDER----NC-TTSMCTAEQFRCRSGRCVRLSWRCDGEDDCADNSDEENCENT 307
Query: 297 KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C+S++F C N +CI + C+G +DCGD SDE
Sbjct: 308 GSPQCASDQFLCWNGRCIGQRKLCNGVNDCGDNSDE 343
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 95/219 (43%), Gaps = 64/219 (29%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC F C NGKCI R W CDGD+DC D+SDE
Sbjct: 70 TCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQ-------------------------- 103
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
PP R+C EE EF C CI W CDGD D
Sbjct: 104 ---DCPP-------------------REC-EEDEFPC------QNGYCIRSLWHCDGDND 134
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
C D +DE CS +F C +G CI W CD D DC DGSDE + C
Sbjct: 135 CGDNSDEQC------DMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDE-ESCPSAVP 187
Query: 300 T--CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
+ C+ EEF C +CI YHCDG+DDCGD SDE +C+
Sbjct: 188 SPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCS 226
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
L+S +P+ +T+ +YIYWTD Q R ++RA+K TG+N+I + L P + + + D
Sbjct: 1247 TLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNL---PGLMDIQAVD 1303
Query: 70 -SQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+Q N C NGGC+ C P P+G + C C +L +G+ C
Sbjct: 1304 RAQPLGFNKCGSRNGGCSHLCLPRPSGFS-CACPTGIQLKGDGKTC 1348
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 258 SCSPDQFSC-----GNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFK 312
+C F+C G CI W CD DNDCGD SDE C TCS +F C N K
Sbjct: 26 ACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDG-C--TLPTCSPLDFHCDNGK 82
Query: 313 CIRKTYHCDGEDDCGDRSDEFNC 335
CIR+++ CDG++DC D SDE +C
Sbjct: 83 CIRRSWVCDGDNDCEDDSDEQDC 105
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 10 VLISATI-YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
VLI + + +PF +T++ IYWTD Q + + A++ TG + + + LE+ DIHV+
Sbjct: 939 VLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENL-MDIHVFHR 997
Query: 69 DSQKCSVNPCNIHNGGCAQSC--HPGPNGTAECKCDESTKLVNEGRMC 114
+ PC + NGGC+ C P P+G + C C L+ +G+ C
Sbjct: 998 QRPPVTT-PCAVENGGCSHLCLRSPSPSGFS-CTCPTGINLLLDGKTC 1043
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
V+ +PFAITV + +YWTD + + A K TG N E+++ P DIH
Sbjct: 635 VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ-EIIRNKLHFPMDIHTLHPQ 693
Query: 70 SQKCSVNPCNIHNGGCAQSCHP-GPNGTAECKCDESTKLVN 109
Q N C +NGGC C P G N T C C + +N
Sbjct: 694 RQPAGKNRCGDNNGGCTHLCLPSGQNYT--CACPTGFRKIN 732
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPKQSS--CSPDQFSCGNGRCINTGWLCDHDN 282
+C+ W CDG+ DC D +DE NC S C+ DQF C NGRCI LC+ N
Sbjct: 280 GRCVRLSWRCDGEDDCADNSDEE----NCENTGSPQCASDQFLCWNGRCIGQRKLCNGVN 335
Query: 283 DCGDGSDEGKECHDKYRT 300
DCGD SDE + + + RT
Sbjct: 336 DCGDNSDESPQQNCRPRT 353
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
VL+S +PFA+T +IYWTD Q + + R +K++G N ++ +E DI V S
Sbjct: 1551 VLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVE-GLMDIIVVSPQ 1609
Query: 70 SQKCSVNPCNIHNGGCAQSC 89
Q N C ++NGGC+ C
Sbjct: 1610 RQT-GTNACGVNNGGCSHLC 1628
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDP 154
C +F C NG+CI + C+G +DCGDNSDE P
Sbjct: 312 CASDQFLCWNGRCIGQRKLCNGVNDCGDNSDESP 345
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 133 CISRMWSCDGDDDCGDNSDED 153
CI W CDGD+DCGD+SDED
Sbjct: 44 CIPAQWQCDGDNDCGDHSDED 64
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
CN++NGGCAQ C G +C C +L +GR C
Sbjct: 358 CNVNNGGCAQKCQM-IRGAVQCTCHTGYRLTEDGRTC 393
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 108/258 (41%), Gaps = 106/258 (41%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C+ +F C+NG CI +W CDGD+DCGDNSDE C++
Sbjct: 110 CEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDEQ---CDM--------------------- 145
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
RKC ++ EF C++ CI + W CDGD DC
Sbjct: 146 -------------------------RKCSDK-EFRCSD------GSCIAEHWYCDGDTDC 173
Query: 241 VDGADENTTALNCPK-------------------------------------QSSCSPDQ 263
DG+DE NCP +S CS Q
Sbjct: 174 KDGSDEE----NCPSAVPAPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQ 229
Query: 264 ------FSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKT 317
F C +G CIN GW CD D DC D SDE + C C++E+F C + +C+R +
Sbjct: 230 PCRSGEFMCDSGLCINAGWRCDGDADCDDQSDE-RNC--TTSMCTAEQFRCHSGRCVRLS 286
Query: 318 YHCDGEDDCGDRSDEFNC 335
+ CDGEDDC D SDE NC
Sbjct: 287 WRCDGEDDCADNSDEENC 304
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
+ FTC + A CIP +W CDGD DC D +DE+ L +CSP F C NG+
Sbjct: 29 RSHFTCAVS-ALGECTCIPAQWQCDGDNDCGDHSDEDGCIL-----PTCSPLDFHCDNGK 82
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRS 330
CI W+CD DNDC D SDE ++C R C +EF CQN CIR +HCDG++DCGD S
Sbjct: 83 CIRRSWVCDGDNDCEDDSDE-QDC--PPRECEEDEFPCQNGYCIRSLWHCDGDNDCGDNS 139
Query: 331 DE 332
DE
Sbjct: 140 DE 141
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED--PNYCNVQITGVSQPPGELG----VP 174
C +F C +G CI+ W CDGD DC D SDE+ P + V PP L
Sbjct: 148 CSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDEENCP-------SAVPAPPCNLEEFQCAY 200
Query: 175 GHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLC 234
G + + ++ +H R EF C + CI W C
Sbjct: 201 GRCILDIYHCDGDDDCGDWSDESDCSSHQPCRS----GEFMC------DSGLCINAGWRC 250
Query: 235 DGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC 294
DGD DC D +DE NC S C+ +QF C +GRC+ W CD ++DC D SDE
Sbjct: 251 DGDADCDDQSDER----NC-TTSMCTAEQFRCHSGRCVRLSWRCDGEDDCADNSDEENCE 305
Query: 295 HDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+ C+ ++F C N +CI + C+G +DCGD SDE
Sbjct: 306 NTGSPQCALDQFLCWNGRCIGQRKLCNGVNDCGDNSDE 343
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 94/219 (42%), Gaps = 64/219 (29%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC F C NGKCI R W CDGD+DC D+SDE
Sbjct: 70 TCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQ-------------------------- 103
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
PP R+C EE EF C CI W CDGD D
Sbjct: 104 ---DCPP-------------------REC-EEDEFPC------QNGYCIRSLWHCDGDND 134
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
C D +DE CS +F C +G CI W CD D DC DGSDE + C
Sbjct: 135 CGDNSDEQC------DMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGSDE-ENCPSAVP 187
Query: 300 T--CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C+ EEF C +CI YHCDG+DDCGD SDE +C+
Sbjct: 188 APPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCS 226
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
L+S +P+ +T+ +YIYWTD Q R ++RA+K TG+N+I + L P + + + D
Sbjct: 1247 TLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNL---PGLMDMQAVD 1303
Query: 70 -SQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+Q N C NGGC+ C P P+G + C C +L +G+ C
Sbjct: 1304 RAQPLGFNKCGSRNGGCSHLCLPRPSGFS-CACPTGIQLKGDGKTC 1348
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 10 VLISATI-YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSA 68
VLI + + +PF +T++ IYWTD Q + + A++ TG + + + LE+ DIHV+
Sbjct: 939 VLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENL-MDIHVFHR 997
Query: 69 DSQKCSVNPCNIHNGGCAQSCHPGPNGTA-ECKCDESTKLVNEGRMC 114
S PC + NGGC+ C PN + C C L+++G+ C
Sbjct: 998 RRPPVST-PCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTC 1043
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 258 SCSPDQFSC-----GNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFK 312
+C F+C G CI W CD DNDCGD SDE TCS +F C N K
Sbjct: 26 ACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCI---LPTCSPLDFHCDNGK 82
Query: 313 CIRKTYHCDGEDDCGDRSDEFNC 335
CIR+++ CDG++DC D SDE +C
Sbjct: 83 CIRRSWVCDGDNDCEDDSDEQDC 105
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
V+ +PFAITV + +YWTD + + A K TG N E+++ P DIH
Sbjct: 635 VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQ-EIIRNKLHFPMDIHTLHPQ 693
Query: 70 SQKCSVNPCNIHNGGCAQSCHP-GPNGTAEC 99
Q N C +NGGC C P G N T C
Sbjct: 694 RQPAGKNRCGDNNGGCTHLCLPSGQNYTCAC 724
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPKQSS--CSPDQFSCGNGRCINTGWLCDHDN 282
+C+ W CDG+ DC D +DE NC S C+ DQF C NGRCI LC+ N
Sbjct: 280 GRCVRLSWRCDGEDDCADNSDEE----NCENTGSPQCALDQFLCWNGRCIGQRKLCNGVN 335
Query: 283 DCGDGSDEGKECHDKYRT 300
DCGD SDE + + + RT
Sbjct: 336 DCGDNSDESPQQNCRPRT 353
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69
VL+S +PFA+T +IYWTD Q + + R +K++G N ++ +E DI V S
Sbjct: 1551 VLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVE-GLMDIIVVSPQ 1609
Query: 70 SQKCSVNPCNIHNGGCAQSC 89
Q N C ++NGGC C
Sbjct: 1610 RQT-GTNACGVNNGGCTHLC 1628
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDP 154
C +F C NG+CI + C+G +DCGDNSDE P
Sbjct: 312 CALDQFLCWNGRCIGQRKLCNGVNDCGDNSDESP 345
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 133 CISRMWSCDGDDDCGDNSDED 153
CI W CDGD+DCGD+SDED
Sbjct: 44 CIPAQWQCDGDNDCGDHSDED 64
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
CN++NGGCAQ C G +C C +L +G C
Sbjct: 358 CNVNNGGCAQKCQM-VRGAVQCTCHTGYRLTEDGHTC 393
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 37/230 (16%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ- 178
+C ++F CR+GKCI+ W CDG +C D SDE P C V+ + G V
Sbjct: 26 SCSRNEFQCRDGKCIASKWVCDGSPECPDGSDESPETC----MSVTCQSNQFSCGGRVSR 81
Query: 179 -ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWL 233
I + G Q N + + C +T +F C + K CI +++
Sbjct: 82 CIPDSWRCDG--------QVDCENDSDEQGCPPKTCSQDDFRCQDGK------CISPQFV 127
Query: 234 CDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE--- 290
CDGD DC+DG+DE +C + ++C P F C + CI + W CD D DC DGSDE
Sbjct: 128 CDGDRDCLDGSDE----AHC-QATTCGPAHFRCNSSICIPSLWACDGDVDCVDGSDEWPQ 182
Query: 291 ---GKECHDK--YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
G++ K CSS EF C + +CI +++ CDGE DC D+SDE +C
Sbjct: 183 NCQGRDTASKGVSSPCSSLEFHCGSSECIHRSWVCDGEADCKDKSDEEHC 232
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 93/224 (41%), Gaps = 68/224 (30%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC F C++GKCIS + CDGD DC D SDE +C G P H
Sbjct: 108 TCSQDDFRCQDGKCISPQFVCDGDRDCLDGSDE--AHCQATTCG----------PAH--- 152
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
F C N + CIP W CDGD D
Sbjct: 153 ----------------------------------FRC------NSSICIPSLWACDGDVD 172
Query: 240 CVDGADENTTALNCPKQ--------SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG 291
CVDG+DE NC + S CS +F CG+ CI+ W+CD + DC D SDE
Sbjct: 173 CVDGSDE--WPQNCQGRDTASKGVSSPCSSLEFHCGSSECIHRSWVCDGEADCKDKSDEE 230
Query: 292 KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
H TC +EF C + CI + CD E DC D SDE C
Sbjct: 231 ---HCAVATCRPDEFQCADGSCIHGSRQCDREHDCKDMSDELGC 271
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 93/216 (43%), Gaps = 56/216 (25%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQIT---GVSQPPGELGVPGH 176
TC + F C + CI +W+CDGD DC D SDE P C + T GVS P L
Sbjct: 147 TCGPAHFRCNSSICIPSLWACDGDVDCVDGSDEWPQNCQGRDTASKGVSSPCSSL----- 201
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
EF C ++CI + W+CDG
Sbjct: 202 ------------------------------------EFHC------GSSECIHRSWVCDG 219
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHD 296
+ DC D +DE A+ ++C PD+F C +G CI+ CD ++DC D SDE C +
Sbjct: 220 EADCKDKSDEEHCAV-----ATCRPDEFQCADGSCIHGSRQCDREHDCKDMSDE-LGCVN 273
Query: 297 KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+ +F C + +CI CD DC D SDE
Sbjct: 274 VTQCDGPNKFKCHSGECISLDKVCDSARDCQDWSDE 309
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
Query: 213 EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN--GR 270
EF C + K CI KW+CDG P+C DG+DE+ +C +QFSCG R
Sbjct: 31 EFQCRDGK------CIASKWVCDGSPECPDGSDESPETC---MSVTCQSNQFSCGGRVSR 81
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRS 330
CI W CD DC + SDE + C K TCS ++F CQ+ KCI + CDG+ DC D S
Sbjct: 82 CIPDSWRCDGQVDCENDSDE-QGCPPK--TCSQDDFRCQDGKCISPQFVCDGDRDCLDGS 138
Query: 331 DEFNCN 336
DE +C
Sbjct: 139 DEAHCQ 144
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 256 QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC--QNFKC 313
+ SCS ++F C +G+CI + W+CD +C DGSDE E TC S +F+C + +C
Sbjct: 24 EDSCSRNEFQCRDGKCIASKWVCDGSPECPDGSDESPETCMSV-TCQSNQFSCGGRVSRC 82
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I ++ CDG+ DC + SDE C
Sbjct: 83 IPDSWRCDGQVDCENDSDEQGC 104
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF++ ++ + +YWTD+ ++ A + TG++ + +V SP DI ++ +Q VN
Sbjct: 607 HPFSLAIYEDKVYWTDVINEAIFSANRLTGSD-VNLVAENLLSPEDIVLFHKVTQPRGVN 665
Query: 77 PCN----IHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMCVAK 117
C + NGGC C P P + C C + L + R C+ +
Sbjct: 666 WCETTALLPNGGCQYLCLPAPQIGPHSPKFTCACPDGMLLAKDMRSCLTE 715
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 74/189 (39%), Gaps = 63/189 (33%)
Query: 110 EGRMCVAKNIT--CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP 167
+GR +K ++ C +F C + +CI R W CDG+ DC D SDE+ +C V +
Sbjct: 185 QGRDTASKGVSSPCSSLEFHCGSSECIHRSWVCDGEADCKDKSDEE--HCAV----ATCR 238
Query: 168 PGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQC 227
P E I G +R+CD E
Sbjct: 239 PDEFQCADGSCIHG-----------------------SRQCDREH--------------- 260
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQSSC-SPDQFSCGNGRCINTGWLCDHDNDCGD 286
DC D +DE L C + C P++F C +G CI+ +CD DC D
Sbjct: 261 -----------DCKDMSDE----LGCVNVTQCDGPNKFKCHSGECISLDKVCDSARDCQD 305
Query: 287 GSDEG-KEC 294
SDE KEC
Sbjct: 306 WSDEPIKEC 314
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 68 ADSQKCSVNPCNIHNGGCAQ-SCHPGPNGTAECKCDESTKLVNEGRMCVAKNIT-CDG-S 124
+D + C+V C CA SC +G+ +C + K +++ CV N+T CDG +
Sbjct: 227 SDEEHCAVATCRPDEFQCADGSC---IHGSRQCDREHDCKDMSDELGCV--NVTQCDGPN 281
Query: 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNV 159
KF C +G+CIS CD DC D SDE C
Sbjct: 282 KFKCHSGECISLDKVCDSARDCQDWSDEPIKECKT 316
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 112/228 (49%), Gaps = 36/228 (15%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ-- 178
C+ ++F C++GKCIS W CDG +C D SDE C V+ G+ G V
Sbjct: 27 CERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC----LSVTCKSGDFSCGGRVNRC 82
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLC 234
I + G Q N + + C +T EF C + K CI ++++C
Sbjct: 83 IPQFWRCDG--------QVDCDNGSDEQGCPPKTCSQDEFRCHDGK------CISRQFVC 128
Query: 235 DGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KE 293
D D DC+DG+DE + CP +C P F C + CI W CD+D DC DGSDE +
Sbjct: 129 DSDRDCLDGSDEAS----CPVL-TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQR 183
Query: 294 CHDKY------RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C Y CS+ EF C + +CI ++ CDG DC D+SDE NC
Sbjct: 184 CRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 231
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 90/221 (40%), Gaps = 63/221 (28%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC +F C +GKCISR + CD D DC D S D C V G
Sbjct: 108 TCSQDEFRCHDGKCISRQFVCDSDRDCLDGS--DEASCPVLTCG---------------- 149
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
P + +C N + CIP+ W CD DPD
Sbjct: 150 -----------------------PASFQC--------------NSSTCIPQLWACDNDPD 172
Query: 240 CVDGADE-----NTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC 294
C DG+DE + S CS +F C +G CI++ W CD DC D SDE + C
Sbjct: 173 CEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDE-ENC 231
Query: 295 HDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
TC +EF C + CI + CD E DC D SDE C
Sbjct: 232 --AVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 270
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 95/244 (38%), Gaps = 51/244 (20%)
Query: 89 CHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGD 148
CH G + + CD ++ +TC + F C + CI ++W+CD D DC D
Sbjct: 116 CHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCED 175
Query: 149 NSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKC 208
SDE P C G G S P
Sbjct: 176 GSDEWPQRCR----------------GLYVFQGDSSPCSAF------------------- 200
Query: 209 DEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN 268
EF C +CI W CDG PDC D +DE A+ ++C PD+F C +
Sbjct: 201 ----EFHCLS------GECIHSSWRCDGGPDCKDKSDEENCAV-----ATCRPDEFQCSD 245
Query: 269 GRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGD 328
G CI+ CD + DC D SDE C + +F C + +CI C+ DC D
Sbjct: 246 GNCIHGSRQCDREYDCKDMSDE-VGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRD 304
Query: 329 RSDE 332
SDE
Sbjct: 305 WSDE 308
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF++ V + ++WTD+ ++ A + TG+++ + + L SP D+ ++ +Q VN
Sbjct: 607 HPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLL-SPEDMVLFHNLTQPRGVN 665
Query: 77 PC---NIHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMCVAK 117
C + NGGC C P P + C C + L + R C+ +
Sbjct: 666 WCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTE 714
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 61 RDIHVYSADSQKCSVNPCNIHNGGCAQS---CHPGPNGTAECKCDESTKLVNEGRMCVAK 117
R ++V+ DS CS + +G C S C GP +CK D+S +E VA
Sbjct: 185 RGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGP----DCK-DKS----DEENCAVA- 234
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE 152
TC +F C +G CI CD + DC D SDE
Sbjct: 235 --TCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 267
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 112/262 (42%), Gaps = 65/262 (24%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQP---PGELG--VPG 175
C ++F CRNGKCIS W CDG +C D SDE C + +T S G L +PG
Sbjct: 14 CGRNEFQCRNGKCISYKWVCDGSSECQDGSDEWEQTC-MSLTCKSDDFSCGGRLNRCIPG 72
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNR------- 224
H + G Q + + C +T EF C E +R
Sbjct: 73 HWKCDG--------------QQDCEDGSDELGCAPKTCSQDEFRCAEGACISRLFACDGE 118
Query: 225 --------------------------AQCIPKKWLCDGDPDCVDGADENTTALNC----- 253
+ C+P W CDG+PDC DG+DE
Sbjct: 119 PDCPDGSDEASCAPSTCGPAHFRCNSSSCVPALWACDGEPDCDDGSDEWPARCGARPSPQ 178
Query: 254 PKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKC 313
P + CS +F CG+G C++ W CD D DC DGSDE ++C TC +EF C + C
Sbjct: 179 PGRGPCSRHEFHCGSGECVHASWRCDGDADCRDGSDE-RDC--AAATCRPDEFQCSDGTC 235
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I + CD + DCGD SDE C
Sbjct: 236 IHGSRQCDQQQDCGDMSDEVGC 257
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED---PNYC---NVQITGVSQPPGELGV 173
TC +F C G CISR+++CDG+ DC D SDE P+ C + + S P
Sbjct: 95 TCSQDEFRCAEGACISRLFACDGEPDCPDGSDEASCAPSTCGPAHFRCNSSSCVPALWAC 154
Query: 174 PGHVQIT-GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKW 232
G G + P + Q G P +R EF C +C+ W
Sbjct: 155 DGEPDCDDGSDEWPARCGARPSPQPG--RGPCSRH-----EFHC------GSGECVHASW 201
Query: 233 LCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK 292
CDGD DC DG+DE A ++C PD+F C +G CI+ CD DCGD SDE
Sbjct: 202 RCDGDADCRDGSDERDCA-----AATCRPDEFQCSDGTCIHGSRQCDQQQDCGDMSDE-V 255
Query: 293 ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C + ++F C + +CI C+ DC D SDE
Sbjct: 256 GCVNVTLCEGPDKFKCHSGECISLDKVCNSARDCQDWSDE 295
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF++ + + ++WTD+ ++ A + TG++ + +V SP DI ++ +Q VN
Sbjct: 594 HPFSLAIFEDKVFWTDVINEAIFSANRLTGSD-VHLVAENLLSPEDIVLFHNLTQPRGVN 652
Query: 77 PCN---IHNGGCAQSCHPGPNGTAE-----CKCDESTKLVNEGRMC 114
C + NGGC C P P + C C + T L + R C
Sbjct: 653 WCEKTALPNGGCQYLCLPAPQINSHSPKFTCACPDGTLLAADMRSC 698
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 102/217 (47%), Gaps = 63/217 (29%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C+ S+F C NG+CI +W CDGD+DC D S D + C
Sbjct: 51 CEESQFQCSNGRCIPLLWKCDGDEDCSDGS--DESACV---------------------- 86
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDC 240
+K E++F C N QC+P +W CDGDPDC
Sbjct: 87 -------------------------KKTCAESDFVC------NSGQCVPNRWQCDGDPDC 115
Query: 241 VDGADENTTALNCPKQSSCSPDQFSCG--NGRCINTGWLCDHDNDCGDGSDEGKECHDKY 298
DG+DE+ + +C ++ SCG + +CI W CD + DC G DE + C +
Sbjct: 116 EDGSDESAELCH---MRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDE-ENCGNV- 170
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
TCS+ EF C + +CI K++ C+G+DDC D SDE C
Sbjct: 171 -TCSAAEFTCSSGQCISKSFVCNGQDDCSDGSDELEC 206
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 114/250 (45%), Gaps = 39/250 (15%)
Query: 98 ECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYC 157
+C DE ++ CV K TC S F C +G+C+ W CDGD DC D SDE C
Sbjct: 69 KCDGDEDCSDGSDESACVKK--TCAESDFVCNSGQCVPNRWQCDGDPDCEDGSDESAELC 126
Query: 158 NVQITGVSQ----PPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET- 212
+++ V++ P +P + G + + + C T
Sbjct: 127 HMRTCRVNEISCGPQSTQCIPVSWKCDG--------------EKDCDSGEDEENCGNVTC 172
Query: 213 ---EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNG 269
EFTC+ QCI K ++C+G DC DG+DE L C +C +F C +
Sbjct: 173 SAAEFTCSS------GQCISKSFVCNGQDDCSDGSDE----LECAP-PTCGVHEFQCKSS 221
Query: 270 RCINTGWLCDHDNDCGDGSDEGKECHDKYRT----CSSEEFACQNFKCIRKTYHCDGEDD 325
CI W+CD D DC D SDE E + CS+ E C + +CI K + CDG+ D
Sbjct: 222 TCIPISWVCDDDADCSDHSDESLEQCGRQPAPPVKCSTSEVQCGSGECIHKKWRCDGDPD 281
Query: 326 CGDRSDEFNC 335
C D SDE NC
Sbjct: 282 CKDGSDEINC 291
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 99/223 (44%), Gaps = 64/223 (28%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV 177
N+TC ++F C +G+CIS+ + C+G DDC D SDE + P GV
Sbjct: 169 NVTCSAAEFTCSSGQCISKSFVCNGQDDCSDGSDE-----------LECAPPTCGV---- 213
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
EF C + CIP W+CD D
Sbjct: 214 ----------------------------------HEFQC------KSSTCIPISWVCDDD 233
Query: 238 PDCVDGADENTTALNCPKQSS----CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE 293
DC D +DE+ C +Q + CS + CG+G CI+ W CD D DC DGSD E
Sbjct: 234 ADCSDHSDESLE--QCGRQPAPPVKCSTSEVQCGSGECIHKKWRCDGDPDCKDGSD---E 288
Query: 294 CHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
+ RTC ++F C++ CI + C+G DC D +DE NCN
Sbjct: 289 INCPSRTCRPDQFRCEDGNCIHGSRQCNGVRDCLDGTDEANCN 331
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 256 QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIR 315
++ C QF C NGRCI W CD D DC DGSDE C K TC+ +F C + +C+
Sbjct: 48 KAKCEESQFQCSNGRCIPLLWKCDGDEDCSDGSDESA-CVKK--TCAESDFVCNSGQCVP 104
Query: 316 KTYHCDGEDDCGDRSDE 332
+ CDG+ DC D SDE
Sbjct: 105 NRWQCDGDPDCEDGSDE 121
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 2 RIATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPR 61
R+ + M L +P A+T+ + ++W D + VY A K TGA ++ +V L D+ +
Sbjct: 655 RLVLKSHMFLP----HPLALTIFEDRVFWIDGENEAVYGANKFTGAELVTLVNNLNDA-Q 709
Query: 62 DIHVYSADSQKCSVNPC--NIHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMC 114
DI VY Q N C N+ NGGC+ C P P + C C L +G C
Sbjct: 710 DIIVYHELVQPSGRNWCEENMVNGGCSYLCLPAPQINEHSPKYTCTCPAGYFLQEDGLRC 769
Query: 115 VAKNIT 120
NI+
Sbjct: 770 GGFNIS 775
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 92/234 (39%), Gaps = 66/234 (28%)
Query: 68 ADSQKCSVNPCNIHNGGCAQS-CHPGP---NGTAECKCDESTKLVNEGRMCVAKNITCDG 123
+D +C+ C +H C S C P + A+C L GR A + C
Sbjct: 201 SDELECAPPTCGVHEFQCKSSTCIPISWVCDDDADCSDHSDESLEQCGRQ-PAPPVKCST 259
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVS 183
S+ C +G+CI + W CDGD DC D SDE
Sbjct: 260 SEVQCGSGECIHKKWRCDGDPDCKDGSDE------------------------------- 288
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDG 243
+N P +R C + +F C + CI C+G DC+DG
Sbjct: 289 ----------------INCP-SRTCRPD-QFRCED------GNCIHGSRQCNGVRDCLDG 324
Query: 244 ADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECH 295
DE NC CS P +F C +G CI+ +C+H DC D SDE KEC+
Sbjct: 325 TDE----ANCNNVIQCSGPGKFKCRSGECIDINKVCNHHGDCKDWSDEPLKECN 374
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 116/246 (47%), Gaps = 31/246 (12%)
Query: 98 ECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYC 157
+C DE ++ + CV K TC S F C+NG+C+ W CDGD DC D SDE P C
Sbjct: 51 KCDGDEDCADGSDEKNCVKK--TCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQC 108
Query: 158 NVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----E 213
+++ +++ + S V + N + C T E
Sbjct: 109 HMRTCRINE----------ISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADE 158
Query: 214 FTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCIN 273
FTC+ + C+ + ++C+G DC DG+DE L+C +C +F C CI
Sbjct: 159 FTCSSGR------CVSRNFVCNGQDDCDDGSDE----LDCAP-PTCGAHEFQCSTSSCIP 207
Query: 274 TGWLCDHDNDCGDGSDEGKE-CHDK---YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDR 329
W+CD D DC D SDE E C + + C + E C + +CI K + CDG+ DC D
Sbjct: 208 LSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDG 267
Query: 330 SDEFNC 335
SDE NC
Sbjct: 268 SDEVNC 273
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 110/229 (48%), Gaps = 30/229 (13%)
Query: 109 NEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPP 168
+ G K CD S+F C NG+CI+ +W CDGD+DC D SDE C + S
Sbjct: 21 DSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCADGSDE--KNCVKKTCAESDFV 78
Query: 169 GELG--VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNN---RKCDEETEFTCTENKAWN 223
+ G VP Q G + G P R C E +C
Sbjct: 79 CKNGQCVPNRWQCDGDPD----------CEDGSDESPEQCHMRTC-RINEISCGARST-- 125
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDND 283
QCIP W CDG+ DC +G DE NC +CS D+F+C +GRC++ ++C+ +D
Sbjct: 126 --QCIPVSWRCDGENDCDNGEDEE----NC-GNITCSADEFTCSSGRCVSRNFVCNGQDD 178
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C DGSDE +C TC + EF C CI ++ CD + DC D+SDE
Sbjct: 179 CDDGSDE-LDCAPP--TCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDE 224
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 107/229 (46%), Gaps = 43/229 (18%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN-----------VQITG 163
NITC +F C +G+C+SR + C+G DDC D SDE P C + ++
Sbjct: 151 NITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTSSCIPLSW 210
Query: 164 VSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN 223
V + + + P I + KC +E C
Sbjct: 211 VCDDDADCSDQSDESLEQCGRQPVI----------------HTKC-PTSEIQC------G 247
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDND 283
+CI KKW CDGDPDC DG+DE +NCP ++ C PDQF C +G CI+ C+ D
Sbjct: 248 SGECIHKKWRCDGDPDCKDGSDE----VNCPSRT-CRPDQFECEDGSCIHGSRQCNGIRD 302
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C DGSDE C + + +F C++ +CI + CD E DC D SDE
Sbjct: 303 CVDGSDE-VNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDE 350
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 17/142 (11%)
Query: 197 TGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQ 256
+G KCD ++F CT + CI W CDGD DC DG+DE NC K+
Sbjct: 22 SGATASGKKAKCDS-SQFQCTNGR------CITLLWKCDGDEDCADGSDEK----NCVKK 70
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEEFAC--QNFKC 313
+C+ F C NG+C+ W CD D DC DGSDE E CH RTC E +C ++ +C
Sbjct: 71 -TCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCH--MRTCRINEISCGARSTQC 127
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I ++ CDGE+DC + DE NC
Sbjct: 128 IPVSWRCDGENDCDNGEDEENC 149
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 104/232 (44%), Gaps = 38/232 (16%)
Query: 112 RMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL 171
R C I+C R+ +CI W CDG++DC DN +++ N N+ +
Sbjct: 111 RTCRINEISCGA-----RSTQCIPVSWRCDGENDC-DNGEDEENCGNITCSA-------- 156
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQC 227
+ T S + Q + + C T EF C+ + C
Sbjct: 157 -----DEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCS------TSSC 205
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQ----SSCSPDQFSCGNGRCINTGWLCDHDND 283
IP W+CD D DC D +DE+ C +Q + C + CG+G CI+ W CD D D
Sbjct: 206 IPLSWVCDDDADCSDQSDESLE--QCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPD 263
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C DGSD E + RTC ++F C++ CI + C+G DC D SDE NC
Sbjct: 264 CKDGSD---EVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNC 312
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 93/234 (39%), Gaps = 66/234 (28%)
Query: 68 ADSQKCSVNPCNIHNGGCA-QSCHPGP---NGTAECKCDESTKLVNEGRMCVAKNITCDG 123
+D C+ C H C+ SC P + A+C L GR V + C
Sbjct: 183 SDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVI-HTKCPT 241
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVS 183
S+ C +G+CI + W CDGD DC D SDE
Sbjct: 242 SEIQCGSGECIHKKWRCDGDPDCKDGSDE------------------------------- 270
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDG 243
+N P +R C + +F C + CI C+G DCVDG
Sbjct: 271 ----------------VNCP-SRTCRPD-QFECED------GSCIHGSRQCNGIRDCVDG 306
Query: 244 ADENTTALNCPKQSSC-SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECH 295
+DE +NC + C P +F C +G CI+ +CD + DC D SDE KECH
Sbjct: 307 SDE----VNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECH 356
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P A+T+ + +YW D + VY A K TG+ + +V L D+ +DI VY Q N
Sbjct: 646 HPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDA-QDIIVYHELVQPSGKN 704
Query: 77 PC--NIHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCR 129
C ++ NGGC C P P + C C L GR C + + S+
Sbjct: 705 WCEDDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDI 764
Query: 130 NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIV 189
N I R S P NV T VS E+ VP + P ++
Sbjct: 765 NTTDILR------------TSGLVPGGINV-TTAVS----EVSVPPKGTSAAWAILPLLL 807
Query: 190 MVMTTVQTGLM 200
+VM V LM
Sbjct: 808 LVMAAVGGYLM 818
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 289 DEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
D G K C S +F C N +CI + CDG++DC D SDE NC
Sbjct: 21 DSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCADGSDEKNC 67
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 116/246 (47%), Gaps = 31/246 (12%)
Query: 98 ECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYC 157
+C DE ++ + CV K TC S F C NG+CI W CDGD DC D SDE P C
Sbjct: 51 KCDGDEDCVDGSDEKNCVKK--TCAESDFVCNNGQCIPNRWQCDGDPDCEDGSDESPEQC 108
Query: 158 NVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----E 213
+++ +++ + S V ++ + + C T E
Sbjct: 109 HMRTCRINE----------ISCGARSTQCIPVSWRCDGESDCDSGEDEENCGNVTCSSDE 158
Query: 214 FTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCIN 273
FTC+ + CI + ++C+G DC DG+DE L+C +C +F C CI
Sbjct: 159 FTCSSGR------CISRNFVCNGQDDCSDGSDE----LDCAP-PTCGAHEFQCSTSSCIP 207
Query: 274 TGWLCDHDNDCGDGSDEGKE-CHDK---YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDR 329
W+CD D DC D SDE E C + + C + E C + +CI K + CDG+ DC D
Sbjct: 208 ISWVCDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDG 267
Query: 330 SDEFNC 335
SDE NC
Sbjct: 268 SDEVNC 273
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 111 GRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGE 170
G + C+ S+F C NG+CI+++W CDGD+DC D SDE C + S
Sbjct: 23 GATATGRKTKCEASQFQCTNGRCITQLWKCDGDEDCVDGSDE--KNCVKKTCAESDFVCN 80
Query: 171 LG--VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNN---RKCDEETEFTCTENKAWNRA 225
G +P Q G + G P R C E +C
Sbjct: 81 NGQCIPNRWQCDGDPD----------CEDGSDESPEQCHMRTC-RINEISCGARST---- 125
Query: 226 QCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCG 285
QCIP W CDG+ DC G DE NC +CS D+F+C +GRCI+ ++C+ +DC
Sbjct: 126 QCIPVSWRCDGESDCDSGEDEE----NC-GNVTCSSDEFTCSSGRCISRNFVCNGQDDCS 180
Query: 286 DGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
DGSDE +C TC + EF C CI ++ CD + DC D+SDE
Sbjct: 181 DGSDE-LDCAPP--TCGAHEFQCSTSSCIPISWVCDDDADCSDQSDE 224
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 107/229 (46%), Gaps = 43/229 (18%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN-----------VQITG 163
N+TC +F C +G+CISR + C+G DDC D SDE P C + I+
Sbjct: 151 NVTCSSDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTSSCIPISW 210
Query: 164 VSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN 223
V + + + P I + KC +E C
Sbjct: 211 VCDDDADCSDQSDESLEQCGRQPVI----------------HTKC-PASEIQC------G 247
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDND 283
+CI KKW CDGDPDC DG+DE +NCP ++ C PDQF C +G CI+ C+ D
Sbjct: 248 SGECIHKKWRCDGDPDCKDGSDE----VNCPSRT-CRPDQFECEDGSCIHGSRQCNGIRD 302
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C DGSDE C + + +F C++ +CI + C+ E DC D SDE
Sbjct: 303 CVDGSDE-VNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDE 350
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Query: 196 QTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPK 255
++G KC E ++F CT + CI + W CDGD DCVDG+DE NC K
Sbjct: 21 ESGATATGRKTKC-EASQFQCTNGR------CITQLWKCDGDEDCVDGSDEK----NCVK 69
Query: 256 QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEEFAC--QNFK 312
+ +C+ F C NG+CI W CD D DC DGSDE E CH RTC E +C ++ +
Sbjct: 70 K-TCAESDFVCNNGQCIPNRWQCDGDPDCEDGSDESPEQCH--MRTCRINEISCGARSTQ 126
Query: 313 CIRKTYHCDGEDDCGDRSDEFNC 335
CI ++ CDGE DC DE NC
Sbjct: 127 CIPVSWRCDGESDCDSGEDEENC 149
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 101/232 (43%), Gaps = 38/232 (16%)
Query: 112 RMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL 171
R C I+C R+ +CI W CDG+ DC DE+ N NV +
Sbjct: 111 RTCRINEISCGA-----RSTQCIPVSWRCDGESDCDSGEDEE-NCGNVTCSS-------- 156
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQC 227
+ T S + Q + + C T EF C+ + C
Sbjct: 157 -----DEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCS------TSSC 205
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQ----SSCSPDQFSCGNGRCINTGWLCDHDND 283
IP W+CD D DC D +DE+ C +Q + C + CG+G CI+ W CD D D
Sbjct: 206 IPISWVCDDDADCSDQSDESLE--QCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPD 263
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C DGSD E + RTC ++F C++ CI + C+G DC D SDE NC
Sbjct: 264 CKDGSD---EVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNC 312
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 93/234 (39%), Gaps = 66/234 (28%)
Query: 68 ADSQKCSVNPCNIHNGGCA-QSCHPGP---NGTAECKCDESTKLVNEGRMCVAKNITCDG 123
+D C+ C H C+ SC P + A+C L GR V + C
Sbjct: 183 SDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVI-HTKCPA 241
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVS 183
S+ C +G+CI + W CDGD DC D SDE
Sbjct: 242 SEIQCGSGECIHKKWRCDGDPDCKDGSDE------------------------------- 270
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDG 243
+N P +R C + +F C + CI C+G DCVDG
Sbjct: 271 ----------------VNCP-SRTCRPD-QFECED------GSCIHGSRQCNGIRDCVDG 306
Query: 244 ADENTTALNCPKQSSC-SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECH 295
+DE +NC + C P +F C +G CI+ +C+ + DC D SDE KECH
Sbjct: 307 SDE----VNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECH 356
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P A+T+ + +YW D + VY A K TG+ + +V L D+ +DI VY Q N
Sbjct: 646 HPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDA-QDIIVYHELVQPSGKN 704
Query: 77 PC--NIHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMCVAKNIT 120
C ++ NGGC C P P + C C L GR C + T
Sbjct: 705 WCEEDMENGGCEYLCLPAPQINEHSPKYTCSCPNGYHLEENGRECQSTATT 755
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 112/229 (48%), Gaps = 30/229 (13%)
Query: 109 NEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPP 168
+ G K CD S+F C NG+CI+ +W CDGD+DC D SDE C + S
Sbjct: 21 DSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCTDGSDE--KNCVKKTCAESDFV 78
Query: 169 GELG--VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNN---RKCDEETEFTCTENKAWN 223
+ G VP Q G + G P R C E +C
Sbjct: 79 CKNGQCVPNRWQCDGDPD----------CEDGSDESPEQCHMRTC-RINEISCGARST-- 125
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDND 283
QCIP+ W CDG+ DC +G DE NC +CS D+F+C +GRC++ ++C+ +D
Sbjct: 126 --QCIPESWRCDGENDCDNGEDEE----NC-GNITCSADEFTCSSGRCVSRNFVCNGQDD 178
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C DGSDE +C TC + EF C+ CI ++ CD + DC D+SDE
Sbjct: 179 CDDGSDE-LDCAPP--TCGAHEFQCRTSSCIPLSWVCDDDADCSDQSDE 224
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 117/250 (46%), Gaps = 39/250 (15%)
Query: 98 ECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYC 157
+C DE ++ + CV K TC S F C+NG+C+ W CDGD DC D SDE P C
Sbjct: 51 KCDGDEDCTDGSDEKNCVKK--TCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQC 108
Query: 158 NVQITGVSQ----PPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET- 212
+++ +++ +P + G + N + C T
Sbjct: 109 HMRTCRINEISCGARSTQCIPESWRCDG--------------ENDCDNGEDEENCGNITC 154
Query: 213 ---EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNG 269
EFTC+ + C+ + ++C+G DC DG+DE L+C +C +F C
Sbjct: 155 SADEFTCSSGR------CVSRNFVCNGQDDCDDGSDE----LDCAP-PTCGAHEFQCRTS 203
Query: 270 RCINTGWLCDHDNDCGDGSDEGKE-CHDK---YRTCSSEEFACQNFKCIRKTYHCDGEDD 325
CI W+CD D DC D SDE E C + + C + E C + +CI K + CDG+ D
Sbjct: 204 SCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPD 263
Query: 326 CGDRSDEFNC 335
C D SDE NC
Sbjct: 264 CKDGSDEVNC 273
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 107/229 (46%), Gaps = 43/229 (18%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN-----------VQITG 163
NITC +F C +G+C+SR + C+G DDC D SDE P C + ++
Sbjct: 151 NITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCRTSSCIPLSW 210
Query: 164 VSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN 223
V + + + P I + KC +E C
Sbjct: 211 VCDDDADCSDQSDESLEQCGRQPVI----------------HTKC-PTSEIQC------G 247
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDND 283
+CI KKW CDGDPDC DG+DE +NCP ++ C PDQF C +G CI+ C+ D
Sbjct: 248 SGECIHKKWRCDGDPDCKDGSDE----VNCPSRT-CRPDQFECEDGSCIHGSRQCNGIRD 302
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C DGSDE C + + +F C++ +CI T CD E DC D SDE
Sbjct: 303 CVDGSDE-VNCKNVNQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDE 350
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
Query: 197 TGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQ 256
+G KCD ++F CT + CI W CDGD DC DG+DE NC K+
Sbjct: 22 SGATASGKKAKCDS-SQFQCTNGR------CITLLWKCDGDEDCTDGSDEK----NCVKK 70
Query: 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEEFAC--QNFKC 313
+C+ F C NG+C+ W CD D DC DGSDE E CH RTC E +C ++ +C
Sbjct: 71 -TCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCH--MRTCRINEISCGARSTQC 127
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I +++ CDGE+DC + DE NC
Sbjct: 128 IPESWRCDGENDCDNGEDEENC 149
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 103/232 (44%), Gaps = 38/232 (16%)
Query: 112 RMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL 171
R C I+C R+ +CI W CDG++DC DN +++ N N+ +
Sbjct: 111 RTCRINEISCGA-----RSTQCIPESWRCDGENDC-DNGEDEENCGNITCSA-------- 156
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQC 227
+ T S + Q + + C T EF C + C
Sbjct: 157 -----DEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQC------RTSSC 205
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQ----SSCSPDQFSCGNGRCINTGWLCDHDND 283
IP W+CD D DC D +DE+ C +Q + C + CG+G CI+ W CD D D
Sbjct: 206 IPLSWVCDDDADCSDQSDESLE--QCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPD 263
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C DGSD E + RTC ++F C++ CI + C+G DC D SDE NC
Sbjct: 264 CKDGSD---EVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNC 312
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 92/234 (39%), Gaps = 66/234 (28%)
Query: 68 ADSQKCSVNPCNIHNGGC-AQSCHPGP---NGTAECKCDESTKLVNEGRMCVAKNITCDG 123
+D C+ C H C SC P + A+C L GR V + C
Sbjct: 183 SDELDCAPPTCGAHEFQCRTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVI-HTKCPT 241
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVS 183
S+ C +G+CI + W CDGD DC D SDE
Sbjct: 242 SEIQCGSGECIHKKWRCDGDPDCKDGSDE------------------------------- 270
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDG 243
+N P +R C + +F C + CI C+G DCVDG
Sbjct: 271 ----------------VNCP-SRTCRPD-QFECED------GSCIHGSRQCNGIRDCVDG 306
Query: 244 ADENTTALNCPKQSSC-SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECH 295
+DE +NC + C P +F C +G CI+ +CD + DC D SDE KECH
Sbjct: 307 SDE----VNCKNVNQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECH 356
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P A+T+ + +YW D + VY A K TG+ + +V L D+ +DI +Y Q N
Sbjct: 646 HPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDA-QDIIIYHELVQPSGKN 704
Query: 77 PC--NIHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCR 129
C ++ NGGC C P P + C C L GR C + + S+
Sbjct: 705 WCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDV 764
Query: 130 NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIV 189
N I R S P NV T VS E+ VP + P ++
Sbjct: 765 NTTDILR------------TSGLVPGGINV-TTAVS----EVSVPPKGTSAAWAILPLLL 807
Query: 190 MVMTTVQTGLM 200
+VM V LM
Sbjct: 808 LVMAAVGGYLM 818
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 289 DEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
D G K C S +F C N +CI + CDG++DC D SDE NC
Sbjct: 21 DSGATASGKKAKCDSSQFQCTNGRCITLLWKCDGDEDCTDGSDEKNC 67
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 50/350 (14%)
Query: 10 VLISATIYPFAITVHRNYIYWTDLQ-------LRGVYRAEKHTGANMIEMVKRLEDSPRD 62
+L S P ++TV + ++W + Q R +K ++ ++ + P
Sbjct: 807 ILRSGLKSPHSLTVAGDNLFWIESQNKLYSTNFRTASVKQKTVEFDLSKLNDNMTSLPGH 866
Query: 63 IHVYSADSQKCSV--------NPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114
+ YS D+Q + C +NG C+ C P + C C +L N+ R C
Sbjct: 867 LTPYSRDAQYVVTLRKDDIPKHDCQKNNGNCSHVCLPSLITSFICACPPGMELSNDNRTC 926
Query: 115 VAKNITCDGSKFFC-RNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGV 173
++ + C +++ C + CI R CDG ++C + DE E +
Sbjct: 927 ISHH-ECSKNEYKCSEHNICIQRNQLCDGIENCPNGEDE---------------TSECRI 970
Query: 174 PGHVQITGVSQPPGIVMVMT---TVQTGLMNHPNNRKCDE----ETEFTCTENKAWNRAQ 226
G + G + + + + + + C++ EF C +
Sbjct: 971 KGRCKENQFMCKNGDCIRLKDRCNSRYDCTDQSDEQNCEKPKCKSDEFQCKFTET----- 1025
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CIPK +CD +PDC D +DE +C ++ C+ ++F C NG+CI ++CD+DNDC D
Sbjct: 1026 CIPKTKMCDSNPDCDDLSDEE----DC-RKVECTSNEFKCNNGKCIPNTFVCDNDNDCED 1080
Query: 287 GSDEGKE-CHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
G DE E C+ K + F C N CI + C+G +DC D SDE +C
Sbjct: 1081 GEDEAAEKCYSKIACKMPKMFKCPNGDCISDSLLCNGINDCNDGSDEVHC 1130
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 117 KNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGH 176
+ + C ++F C NGKCI + CD D+DC D DE C +I + P P
Sbjct: 1049 RKVECTSNEFKCNNGKCIPNTFVCDNDNDCEDGEDEAAEKCYSKI--ACKMPKMFKCPNG 1106
Query: 177 VQITGVSQPPGI---------VMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQC 227
I+ GI V ++ V T L+N N E+ C C
Sbjct: 1107 DCISDSLLCNGINDCNDGSDEVHCLSNVTTHLVNCSLN-------EYRCLGTDI-----C 1154
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDG 287
+PK CDG DC DE NC + C ++F+C N RCI W+CD NDCGD
Sbjct: 1155 LPKNVRCDGKNDCPQSDDEQ----NC---TYCFENEFACDNKRCIPELWVCDKANDCGDN 1207
Query: 288 SDEGKECHDKYRTCSS----EEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
SDE K C R +EF C C+ + CDG DC D SDE
Sbjct: 1208 SDE-KNCDGSKRNFIESNECDEFKCSVGTCLPYSKVCDGNRDCPDGSDE 1255
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 16/140 (11%)
Query: 209 DEETEFTCTENKAWNRAQ-CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCG 267
DE++ TC +++ + Q CIP CD DC+D +DE+ C K +C+ ++F C
Sbjct: 75 DEKSFITCAKDQFKCKNQECIPAAKYCDMVNDCLDESDEHD---GCVKHLNCT-NKFLCT 130
Query: 268 NGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS-----EEFACQNFKCIRKTYHCDG 322
+G CIN W+CD NDC DG+DE +K + SS ++ C N +CI CD
Sbjct: 131 DGHCINKEWVCDGRNDCPDGNDEWNCKANKTSSASSCKTENYQYMCANHRCISLKVVCDK 190
Query: 323 EDDCGDRSDE------FNCN 336
+DDCGD SDE FNC+
Sbjct: 191 KDDCGDGSDEGPGCTQFNCS 210
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 223 NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS--SCSPDQFSCGNGRCINTGWLCDH 280
N +CIP CD C+DG+DE+ + ++S +C+ DQF C N CI CD
Sbjct: 44 NSGECIPVDKKCDYIDHCIDGSDEDFECDHLDEKSFITCAKDQFKCKNQECIPAAKYCDM 103
Query: 281 DNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
NDC D SDE C K+ C++ +F C + CI K + CDG +DC D +DE+NC
Sbjct: 104 VNDCLDESDEHDGCV-KHLNCTN-KFLCTDGHCINKEWVCDGRNDCPDGNDEWNC 156
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 72/179 (40%), Gaps = 57/179 (31%)
Query: 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
ITC +F C+N +CI CD +DC D SDE G H+
Sbjct: 80 ITCAKDQFKCKNQECIPAAKYCDMVNDCLDESDEHD-----------------GCVKHLN 122
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDP 238
T +F CT+ CI K+W+CDG
Sbjct: 123 CTN-------------------------------KFLCTD------GHCINKEWVCDGRN 145
Query: 239 DCVDGADE-NTTALNCPKQSSCSPD--QFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC 294
DC DG DE N A SSC + Q+ C N RCI+ +CD +DCGDGSDEG C
Sbjct: 146 DCPDGNDEWNCKANKTSSASSCKTENYQYMCANHRCISLKVVCDKKDDCGDGSDEGPGC 204
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 255 KQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC----HDKYRTCSSEEFACQN 310
K++ C F C +G CI CD+ + C DGSDE EC + TC+ ++F C+N
Sbjct: 32 KKTKCEDGYFQCNSGECIPVDKKCDYIDHCIDGSDEDFECDHLDEKSFITCAKDQFKCKN 91
Query: 311 FKCIRKTYHCDGEDDCGDRSDE 332
+CI +CD +DC D SDE
Sbjct: 92 QECIPAAKYCDMVNDCLDESDE 113
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 4 ATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDI 63
T +VL PF++TV +N +YW+D + G+ K TG + +++ R + P +
Sbjct: 480 GTDRRIVLHDIIQEPFSMTVFQNKLYWSDWESNGIQTCNKFTGKDW-KILIRNHNKPYSV 538
Query: 64 HVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC--VAKN--- 118
H+ + + NPC ++ C+Q C N C C KL + C V KN
Sbjct: 539 HMDHSAIKPNIDNPC--YSNPCSQLCMLNQNKGYTCGCTLDKKLNADKHTCQDVKKNQHL 596
Query: 119 ITCDGSKFF 127
+ G KF
Sbjct: 597 LIIQGRKFI 605
Score = 38.1 bits (87), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 116 AKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE 152
K++ C +KF C +G CI++ W CDG +DC D +DE
Sbjct: 118 VKHLNC-TNKFLCTDGHCINKEWVCDGRNDCPDGNDE 153
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 116/247 (46%), Gaps = 33/247 (13%)
Query: 98 ECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYC 157
+C DE ++ + CV K TC S F C NG+C+ W CDGD DC D SDE P C
Sbjct: 51 KCDGDEDCVDGSDEKNCVKK--TCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESPEQC 108
Query: 158 NVQITGVSQPPGELGVPGH-VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET---- 212
+++ + E+ H Q VS + + + C T
Sbjct: 109 HMRTCRIH----EISCGAHSTQCIPVSW-------RCDGENDCDSGEDEENCGNITCSPD 157
Query: 213 EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCI 272
EFTC+ + CI + ++C+G DC DG+DE L+C +C +F C CI
Sbjct: 158 EFTCSSGR------CISRNFVCNGQDDCSDGSDE----LDCAP-PTCGAHEFQCSTSSCI 206
Query: 273 NTGWLCDHDNDCGDGSDEGKE-CHDK---YRTCSSEEFACQNFKCIRKTYHCDGEDDCGD 328
W+CD D DC D SDE E C + + C + E C + +CI K + CDG+ DC D
Sbjct: 207 PISWVCDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKD 266
Query: 329 RSDEFNC 335
SDE NC
Sbjct: 267 GSDEVNC 273
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 109/228 (47%), Gaps = 32/228 (14%)
Query: 111 GRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGE 170
G + C+ S+F C NG+CI+ +W CDGD+DC D S D C + S
Sbjct: 23 GATGTGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCVDGS--DEKNCVKKTCAESDFVCN 80
Query: 171 LG--VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNR 224
G VP + G + G P +C T E +C +
Sbjct: 81 NGQCVPSRWKCDGDPD----------CEDGSDESP--EQCHMRTCRIHEISCGAHST--- 125
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDC 284
QCIP W CDG+ DC G DE NC +CSPD+F+C +GRCI+ ++C+ +DC
Sbjct: 126 -QCIPVSWRCDGENDCDSGEDEE----NC-GNITCSPDEFTCSSGRCISRNFVCNGQDDC 179
Query: 285 GDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
DGSDE +C TC + EF C CI ++ CD + DC D+SDE
Sbjct: 180 SDGSDE-LDCAPP--TCGAHEFQCSTSSCIPISWVCDDDADCSDQSDE 224
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 107/229 (46%), Gaps = 43/229 (18%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN-----------VQITG 163
NITC +F C +G+CISR + C+G DDC D SDE P C + I+
Sbjct: 151 NITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTSSCIPISW 210
Query: 164 VSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN 223
V + + + P I + KC +E C
Sbjct: 211 VCDDDADCSDQSDESLEQCGRQPVI----------------HTKC-PASEIQC------G 247
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDND 283
+CI KKW CDGDPDC DG+DE +NCP ++ C PDQF C +G CI+ C+ D
Sbjct: 248 SGECIHKKWRCDGDPDCKDGSDE----VNCPSRT-CRPDQFECEDGSCIHGSRQCNGIRD 302
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
C DGSDE C + + +F C++ +CI + C+ E DC D SDE
Sbjct: 303 CVDGSDE-VNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDE 350
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Query: 196 QTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPK 255
++G KC E ++F CT + CI W CDGD DCVDG+DE NC K
Sbjct: 21 ESGATGTGRKAKC-EPSQFQCTNGR------CITLLWKCDGDEDCVDGSDEK----NCVK 69
Query: 256 QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEEFAC--QNFK 312
+ +C+ F C NG+C+ + W CD D DC DGSDE E CH RTC E +C + +
Sbjct: 70 K-TCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESPEQCH--MRTCRIHEISCGAHSTQ 126
Query: 313 CIRKTYHCDGEDDCGDRSDEFNC 335
CI ++ CDGE+DC DE NC
Sbjct: 127 CIPVSWRCDGENDCDSGEDEENC 149
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 102/232 (43%), Gaps = 38/232 (16%)
Query: 112 RMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL 171
R C I+C + +CI W CDG++DC +S ED C ++ P E
Sbjct: 111 RTCRIHEISCGA-----HSTQCIPVSWRCDGENDC--DSGEDEENCG----NITCSPDEF 159
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQC 227
I+ + Q + + C T EF C+ + C
Sbjct: 160 TCSSGRCISR--------NFVCNGQDDCSDGSDELDCAPPTCGAHEFQCS------TSSC 205
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQ----SSCSPDQFSCGNGRCINTGWLCDHDND 283
IP W+CD D DC D +DE+ C +Q + C + CG+G CI+ W CD D D
Sbjct: 206 IPISWVCDDDADCSDQSDESLE--QCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPD 263
Query: 284 CGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C DGSD E + RTC ++F C++ CI + C+G DC D SDE NC
Sbjct: 264 CKDGSD---EVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNC 312
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 93/234 (39%), Gaps = 66/234 (28%)
Query: 68 ADSQKCSVNPCNIHNGGCA-QSCHPGP---NGTAECKCDESTKLVNEGRMCVAKNITCDG 123
+D C+ C H C+ SC P + A+C L GR V + C
Sbjct: 183 SDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVI-HTKCPA 241
Query: 124 SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVS 183
S+ C +G+CI + W CDGD DC D SDE
Sbjct: 242 SEIQCGSGECIHKKWRCDGDPDCKDGSDE------------------------------- 270
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDG 243
+N P +R C + +F C + CI C+G DCVDG
Sbjct: 271 ----------------VNCP-SRTCRPD-QFECED------GSCIHGSRQCNGIRDCVDG 306
Query: 244 ADENTTALNCPKQSSC-SPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECH 295
+DE +NC + C P +F C +G CI+ +C+ + DC D SDE KECH
Sbjct: 307 SDE----VNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECH 356
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+P A+T+ + +YW D + VY A K TG+ + +V L D+ +DI VY Q N
Sbjct: 646 HPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDA-QDIIVYHELVQPSGKN 704
Query: 77 PC--NIHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCR 129
C ++ NGGC C P P + C C + GR C + T S+
Sbjct: 705 WCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPSGYNVEENGRDCQSTATTVTYSETKDT 764
Query: 130 NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIV 189
N IS S P NV T VS E+ VP + P ++
Sbjct: 765 NTTEISA------------TSGLVPGGINV-TTAVS----EVSVPPKGTSAAWAILPLLL 807
Query: 190 MVMTTVQTGLM 200
+VM V LM
Sbjct: 808 LVMAAVGGYLM 818
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ--ITGVS 183
F C++GKCIS W CDG+ +C D SDE C V+ G+ G V I
Sbjct: 1 FQCQDGKCISYKWICDGNTECKDGSDESLETC----MSVTCKIGDFSCGGRVNRCIPESW 56
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWLCDGDPD 239
+ G Q N + C +T EF C + K CI K++CD D D
Sbjct: 57 RCDG--------QQDCENGSDEEGCSPKTCSQDEFRCQDGK------CIAPKFVCDSDRD 102
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KECHDKY 298
C+DG+DE + CP +C P F C + CI W CD D DC DGSDE + C
Sbjct: 103 CLDGSDEAS----CPT-PTCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHS 157
Query: 299 RT--------CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
+ CS+ EF C + +CI ++ CDG+ DC D+SDE NC+
Sbjct: 158 SSLPERSNNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEENCD 203
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 105/234 (44%), Gaps = 42/234 (17%)
Query: 118 NITCDGSKFFC--RNGKCISRMWSCDGDDDCGDNSDED---PNYCNVQITGVSQPPGELG 172
++TC F C R +CI W CDG DC + SDE+ P C+ G+
Sbjct: 34 SVTCKIGDFSCGGRVNRCIPESWRCDGQQDCENGSDEEGCSPKTCSQDEFRCQD--GKCI 91
Query: 173 VPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCI 228
P V ++ + C T F C N + CI
Sbjct: 92 APKFV---------------CDSDRDCLDGSDEASCPTPTCGPASFQC------NSSTCI 130
Query: 229 PKKWLCDGDPDCVDGADE-----NTTALNCPKQSS--CSPDQFSCGNGRCINTGWLCDHD 281
P+ W CDGDPDC DG+DE + + + P++S+ CS +F C +G CI++ W CD D
Sbjct: 131 PELWACDGDPDCEDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCHSGECIHSSWRCDGD 190
Query: 282 NDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DC D SDE + C TC +EF C + CI + CD E DC D SDE C
Sbjct: 191 TDCKDKSDE-ENC--DVATCRPDEFQCSDGTCIHGSRQCDREYDCKDMSDEQGC 241
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 91/213 (42%), Gaps = 49/213 (23%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC + F C + CI +W+CDGD DC D SDE P +C + + +
Sbjct: 116 TCGPASFQCNSSTCIPELWACDGDPDCEDGSDEWPQHCRSHSSSLPER------------ 163
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
+N C EF C + +CI W CDGD D
Sbjct: 164 ------------------------SNNPC-SALEFHC------HSGECIHSSWRCDGDTD 192
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299
C D +DE NC ++C PD+F C +G CI+ CD + DC D SDE + C +
Sbjct: 193 CKDKSDEE----NC-DVATCRPDEFQCSDGTCIHGSRQCDREYDCKDMSDE-QGCVNATL 246
Query: 300 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+F CQ+ +CI C+ DC D SDE
Sbjct: 247 CEGPNKFKCQSGECISLDKVCNSVRDCRDWSDE 279
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF++ + + ++WTD+ ++ A + TG+++ M + L SP DI ++ +Q VN
Sbjct: 578 HPFSLAIFEDKVFWTDIINEAIFSANRLTGSDIHLMAENLL-SPEDIVLFHNLTQPRGVN 636
Query: 77 PCN---IHNGGCAQSCHPGPNGTAE-----CKCDESTKLVNEGRMCVAK 117
C + NGGC C P P C C + L + R C+ +
Sbjct: 637 WCERTALQNGGCQYLCLPAPQINPRSPKFTCACPDGMLLAKDMRSCLTE 685
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 67/179 (37%), Gaps = 61/179 (34%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV 177
N C +F C +G+CI W CDGD DC D SDE+ C+V + P E
Sbjct: 165 NNPCSALEFHCHSGECIHSSWRCDGDTDCKDKSDEE--NCDV----ATCRPDEFQCSDGT 218
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
I G +R+CD E
Sbjct: 219 CIHG-----------------------SRQCDREY------------------------- 230
Query: 238 PDCVDGADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KEC 294
DC D +DE C + C P++F C +G CI+ +C+ DC D SDE KEC
Sbjct: 231 -DCKDMSDEQ----GCVNATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKEC 284
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 108/224 (48%), Gaps = 30/224 (13%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPP--GELG--VPGH 176
CD ++F C +GKCI W CDG +C D+SDE P C G Q G L +P
Sbjct: 27 CDRNEFQCGDGKCIPYKWICDGSAECKDSSDESPETCREVTCGTDQFSCGGRLNRCIPMS 86
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDG 236
+ G T + G + K + +FTC K CI ++CD
Sbjct: 87 WKCDG----------QTDCENGSDENDCTHKVCADDQFTCRSGK------CISLDFVCDE 130
Query: 237 DPDCVDGADENTTALNCPKQSSCSPDQFSCGN-GRCINTGWLCDHDNDCGDGSD----EG 291
D DC DG+DE+ CP +C+P F C + G CI W CD D DC DGSD EG
Sbjct: 131 DLDCDDGSDESY----CP-APTCNPAMFQCKDKGICIPKLWACDGDPDCEDGSDEEHCEG 185
Query: 292 KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+E + CS EF C + +CI ++ CDG DC D+SDE +C
Sbjct: 186 REPIKTDKPCSPLEFHCGSGECIHMSWKCDGGFDCKDKSDEKDC 229
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 115/262 (43%), Gaps = 60/262 (22%)
Query: 94 NGTAECK--CDESTKLVNEGRMCVAKNITCDGSKFFC--RNGKCISRMWSCDGDDDCGDN 149
+G+AECK DES + E +TC +F C R +CI W CDG DC +
Sbjct: 47 DGSAECKDSSDESPETCRE--------VTCGTDQFSCGGRLNRCIPMSWKCDGQTDCENG 98
Query: 150 SDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCD 209
S D N C ++ Q + G + + V CD
Sbjct: 99 S--DENDCTHKVCADDQ---------------FTCRSGKCISLDFV------------CD 129
Query: 210 EETEFTCTENKAW--------------NRAQCIPKKWLCDGDPDCVDGADENTTALNCPK 255
E+ + ++++ ++ CIPK W CDGDPDC DG+DE P
Sbjct: 130 EDLDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCEDGSDEEHCEGREPI 189
Query: 256 QSS--CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKC 313
++ CSP +F CG+G CI+ W CD DC D SDE K+C TC ++F C C
Sbjct: 190 KTDKPCSPLEFHCGSGECIHMSWKCDGGFDCKDKSDE-KDCVKP--TCRPDQFQCNTGTC 246
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I + CD E DC D SDE C
Sbjct: 247 IHGSRQCDREYDCKDLSDEEGC 268
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 98/227 (43%), Gaps = 42/227 (18%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C +F CR+GKCIS + CD D DC D SDE +YC P P Q
Sbjct: 108 VCADDQFTCRSGKCISLDFVCDEDLDCDDGSDE--SYC----------PAPTCNPAMFQ- 154
Query: 180 TGVSQPPGIVMVMTTVQTGLMN--------HPNNR---KCDEE---TEFTCTENKAWNRA 225
+ GI + G + H R K D+ EF C
Sbjct: 155 ---CKDKGICIPKLWACDGDPDCEDGSDEEHCEGREPIKTDKPCSPLEFHC------GSG 205
Query: 226 QCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCG 285
+CI W CDG DC D +DE +C K +C PDQF C G CI+ CD + DC
Sbjct: 206 ECIHMSWKCDGGFDCKDKSDEK----DCVK-PTCRPDQFQCNTGTCIHGSRQCDREYDCK 260
Query: 286 DGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
D SDE + C + + + F C++ +CI C+ + DC D SDE
Sbjct: 261 DLSDE-EGCVNVTKCEGPDVFKCRSGECITMDKVCNKKRDCRDWSDE 306
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF +T+ + ++WTD++ ++ A + TG N++++ + L SP DI +Y Q + N
Sbjct: 605 HPFGLTIFEDLVFWTDIENEAIFSANRLTGRNIMKVAEDLL-SPEDIVLYHNLRQPKAEN 663
Query: 77 PCNIH---NGGCAQSCHPGPNGTAE-----CKCDESTKLVNEGRMCVAKNITCDGS 124
C H NGGC C P P+ TA C C + L ++ R CV + + + S
Sbjct: 664 WCEAHHLGNGGCEYLCLPAPHITARSPKFTCACPDGMHLGDDMRSCVKEPVIPEAS 719
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 259 CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-CHDKYRTCSSEEFAC--QNFKCIR 315
C ++F CG+G+CI W+CD +C D SDE E C + TC +++F+C + +CI
Sbjct: 27 CDRNEFQCGDGKCIPYKWICDGSAECKDSSDESPETCREV--TCGTDQFSCGGRLNRCIP 84
Query: 316 KTYHCDGEDDCGDRSDEFNCNY 337
++ CDG+ DC + SDE +C +
Sbjct: 85 MSWKCDGQTDCENGSDENDCTH 106
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 120 TCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
TC+ + F C++ G CI ++W+CDGD DC D SDE+ +C + + P P
Sbjct: 147 TCNPAMFQCKDKGICIPKLWACDGDPDCEDGSDEE--HCEGREPIKTDKPCS---PLEFH 201
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW-NRAQCIPKKWLCDGD 237
G + M+ G + + + + TC ++ N CI CD +
Sbjct: 202 CGS-----GECIHMSWKCDGGFDCKDKSDEKDCVKPTCRPDQFQCNTGTCIHGSRQCDRE 256
Query: 238 PDCVDGADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDCGDGSDEG-KEC 294
DC D +DE C + C PD F C +G CI +C+ DC D SDE KEC
Sbjct: 257 YDCKDLSDEE----GCVNVTKCEGPDVFKCRSGECITMDKVCNKKRDCRDWSDEPLKEC 311
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
R C EF C + KCI + CDG +C D SDE
Sbjct: 25 RKCDRNEFQCGDGKCIPYKWICDGSAECKDSSDE 58
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPP-GELG---VPG 175
TC + F C NG CI W CDG+++C D SDE C Q+ + G+L +P
Sbjct: 67 TCAETDFACDNGHCIPDRWKCDGEEECSDGSDESEAACTKQVCPAEKISCGDLSNKCIPS 126
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCD 235
+ G ++G+ C + EF C+ NK CI ++CD
Sbjct: 127 SWRCDG----------QKDCESGIDEAGCAPACSPD-EFQCS-NKT-----CISINFVCD 169
Query: 236 GDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKEC- 294
G +C DG+DE + +CSP++F C N CI W+CD+ DC D SDE E
Sbjct: 170 GYNNCGDGSDEKKCS-----PLTCSPNEFQCNNSVCIPQLWVCDNQADCEDHSDESIERC 224
Query: 295 ---HDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ TC++ EF C N +CI + CDG++DC D+SDE +C
Sbjct: 225 GYDAKAFNTCAAHEFQCGNGECILLNWKCDGDEDCKDKSDEQDC 268
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 112 RMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGEL 171
++C A+ I+C + KCI W CDG DC DE + P E
Sbjct: 107 QVCPAEKISCGD-----LSNKCIPSSWRCDGQKDCESGIDE-------AGCAPACSPDEF 154
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW-NRAQCIPK 230
I+ + + + + +KC + TC+ N+ N + CIP+
Sbjct: 155 QCSNKTCIS--------INFVCDGYNNCGDGSDEKKC---SPLTCSPNEFQCNNSVCIPQ 203
Query: 231 KWLCDGDPDCVDGADENTT--ALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGS 288
W+CD DC D +DE+ + ++C+ +F CGNG CI W CD D DC D S
Sbjct: 204 LWVCDNQADCEDHSDESIERCGYDAKAFNTCAAHEFQCGNGECILLNWKCDGDEDCKDKS 263
Query: 289 DEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DE ++C TC +EF C + CI CD DC D SDE C
Sbjct: 264 DE-QDC--PLVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDNSDEAGC 307
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C +F C N CIS + CDG ++CGD SDE + + ++ P E V I
Sbjct: 148 ACSPDEFQCSNKTCISINFVCDGYNNCGDGSDEK------KCSPLTCSPNEFQCNNSVCI 201
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWN----------RAQCIP 229
+ + Q +H DE E + KA+N +CI
Sbjct: 202 PQ--------LWVCDNQADCEDHS-----DESIERCGYDAKAFNTCAAHEFQCGNGECIL 248
Query: 230 KKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
W CDGD DC D +DE +CP +C PD+F CG+G CI+ CD +DC D SD
Sbjct: 249 LNWKCDGDEDCKDKSDEQ----DCP-LVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDNSD 303
Query: 290 EGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
E C + S +F C++ +CI CD DC D SDE
Sbjct: 304 EAG-CVQESACESPSKFQCKSGECIDGGKVCDLHRDCRDWSDE 345
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 15/132 (11%)
Query: 206 RKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFS 265
++CD++ +F C + CIP W CD D DC D +DE +CPK++ C+ F+
Sbjct: 27 KECDKD-QFQCRNER------CIPAVWACDEDNDCSDNSDE----ADCPKKT-CAETDFA 74
Query: 266 CGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNF--KCIRKTYHCDGE 323
C NG CI W CD + +C DGSDE + K + C +E+ +C + KCI ++ CDG+
Sbjct: 75 CDNGHCIPDRWKCDGEEECSDGSDESEAACTK-QVCPAEKISCGDLSNKCIPSSWRCDGQ 133
Query: 324 DDCGDRSDEFNC 335
DC DE C
Sbjct: 134 KDCESGIDEAGC 145
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 10 VLISAT---IYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66
VLIS+ +PF + V + ++WTDL+ ++ A + +G ++ + + L ++P DI V+
Sbjct: 634 VLISSIDDLSHPFGLAVFEDRVFWTDLENEAIFSANRLSGLDISVLAENL-NNPHDIVVF 692
Query: 67 SADSQKCSVNPCNIH---NGGCAQSCHPGPN 94
Q + + C + NGGC C P P+
Sbjct: 693 HELKQPKAPDSCELSPQPNGGCEYLCLPAPH 723
>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila melanogaster GN=yl PE=1
SV=2
Length = 1984
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 29/342 (8%)
Query: 8 SMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEK-HTGANMIEMVKRLED-------- 58
S + P+++ + + ++W +L +Y K + G + + +D
Sbjct: 906 SQIFRGKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYV 965
Query: 59 ---SPRDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115
+P I + ++ +PC NGGC+ C + C C + G
Sbjct: 966 PVATPNGIPLAASSPVGQESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTC 1025
Query: 116 AKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPG 175
+ + C+ F C +G+C++ C+G DC DNSDE C+ + + P L P
Sbjct: 1026 VEALDCE---FRCHSGECLTMNHRCNGRRDCVDNSDE--MNCDEE---HRRKPKVLCSPN 1077
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCD--EETEFTCTENKAWNRAQCIPKKWL 233
Q + +H + + C+ ++++ + +C+ +
Sbjct: 1078 QFACHSGEQCVDKERRCDN-RKDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLV 1136
Query: 234 CDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE 293
CDG DC D +DE L C S C P F CG+G CI W CD DC DGSDE +
Sbjct: 1137 CDGTNDCGDNSDE----LLCEATSRCEPGMFQCGSGSCIAGSWECDGRIDCSDGSDEHDK 1192
Query: 294 CHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C +R+C + C +C+ ++ CDG +DCGD+SDE NC
Sbjct: 1193 C--VHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNC 1232
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 110/231 (47%), Gaps = 29/231 (12%)
Query: 116 AKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE---DPNYCN-VQITGVSQPPGEL 171
+ + CD +F CR+G CI + CDG DC D+SDE D C +QP G
Sbjct: 85 SADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGAC 144
Query: 172 GVPGHVQITGVSQPPG-----IVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQ 226
+ + G+ PG V + G H R C + EF C +++
Sbjct: 145 -LAAELMCNGIDNCPGGEDELNCPVRPGFRFGDTAH-RMRSC-SKYEFMCQQDRT----- 196
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPK-QSSCSPDQFSCGNGRCINTG-WLCDHDNDC 284
CIP ++CDG PDC D +DE C + + +C + C NGRC+ W+CD +DC
Sbjct: 197 CIPIDFMCDGRPDCTDKSDE---VAGCKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDC 253
Query: 285 GDGSDEGKECHDKYRTCSSE--EFACQNFK-CIRKTYHCDGEDDCGDRSDE 332
GDGSDE + C C + +F C+N + C+ + CDG DC D SDE
Sbjct: 254 GDGSDE-RGC---LNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDE 300
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 108/262 (41%), Gaps = 60/262 (22%)
Query: 109 NEGRMCVAKNITCDGSK------------------------FFCRNGKCISRMWSCDGDD 144
+ G CV K CD K C NGKC+ CDG +
Sbjct: 1082 HSGEQCVDKERRCDNRKDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTN 1141
Query: 145 DCGDNSDEDPNYCNVQITGVSQ-PPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHP 203
DCGDNSDE + S+ PG I G + G + G H
Sbjct: 1142 DCGDNSDE------LLCEATSRCEPGMFQCGSGSCIAGSWECDGRI----DCSDGSDEHD 1191
Query: 204 N--NRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS---- 257
+R C + + QC+ + +CDG DC D +DE LNC S
Sbjct: 1192 KCVHRSCPPDMQRCLL-------GQCLDRSLVCDGHNDCGDKSDE----LNCGTDSSTMN 1240
Query: 258 -SCSPDQFSCGNGR--CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFK-C 313
SC+ DQ+ C + C+ + C+ +C G DE +C D CS EF C++ + C
Sbjct: 1241 ISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEA-DCGD---VCSIYEFKCRSGREC 1296
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
IR+ + CDG+ DCGD SDE +C
Sbjct: 1297 IRREFRCDGQKDCGDGSDELSC 1318
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 86/211 (40%), Gaps = 53/211 (25%)
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDE-----DPNYCNVQ-ITGVSQPPGELGV--PGHVQI 179
C G+C+ R CDG +DCGD SDE D + N+ Q L + P V+
Sbjct: 1205 CLLGQCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRC 1264
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEE--------TEFTCTENKAWNRAQCIPKK 231
G ++ P R DE EF C + +CI ++
Sbjct: 1265 NGTTECP-------------------RGEDEADCGDVCSIYEFKCRSGR-----ECIRRE 1300
Query: 232 WLCDGDPDCVDGADENTTALN------------CPKQSSCSPDQFSCGNGRCINTGWLCD 279
+ CDG DC DG+DE + L SC P F C +G C++ +C+
Sbjct: 1301 FRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDCQDGECVDLSRVCN 1360
Query: 280 HDNDCGDGSDEGKECHDKYRTCSSEEFACQN 310
+ DC +G DEG +C R+ S + CQ+
Sbjct: 1361 NFPDCTNGHDEGPKCATACRSASGRQ-VCQH 1390
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 114 CVAKNITCDGSKFFCRNGKCISR-MWSCDGDDDCGDNSDE 152
C ITC G C NG+C+ R W CDG DDCGD SDE
Sbjct: 220 CKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDE 259
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 4 ATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDI 63
TG VL +P+ + + + +YW+D + V+ K +G + + K + + +
Sbjct: 592 GTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAK--DRTIYAV 649
Query: 64 HVYSADSQKCSVNPCNIHNGGCAQSCHPGPN--GTAECKCDESTKLVNEGRMCV 115
H+Y Q S + C N C+ C G C C + +L + R C+
Sbjct: 650 HIYHPAKQPNSPHGCE--NATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCM 701
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 301 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCNY 337
C + +F C++ CI + CDG DC D SDE +C+Y
Sbjct: 90 CDAGQFQCRDGGCILQAKMCDGRGDCKDSSDELDCDY 126
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 299 RTCSSE---EFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
RTC EF C + +C+ + C+G DC D SDE NC+
Sbjct: 1023 RTCVEALDCEFRCHSGECLTMNHRCNGRRDCVDNSDEMNCD 1063
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 99/219 (45%), Gaps = 16/219 (7%)
Query: 120 TCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
C ++F C + +C++ + CD DC D SDE C + +S +G +
Sbjct: 198 VCTETEFACHSYNECVALEYRCDRRPDCRDMSDE--LNCEEPVPELSSSTPAVGKVSPLP 255
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDP 238
+ + V Q L + P C + E +C + CIP+ +LCDG
Sbjct: 256 LWPEAATTPPPPVTHGPQFLLPSVPGPSACGPQ-EASC------HSGHCIPRDYLCDGQE 308
Query: 239 DCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK-ECHDK 297
DC DG+DE L C C P++F+C NG C W CD D DC D +DE
Sbjct: 309 DCRDGSDE----LGCASPPPCEPNEFACENGHCALKLWRCDGDFDCEDRTDEANCSVKQP 364
Query: 298 YRTCSSEEFACQNF-KCIRKTYHCDGEDDCGDRSDEFNC 335
C F C + +CI ++HCD E DC DRSDEF C
Sbjct: 365 GEVCGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGC 403
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 75/167 (44%), Gaps = 48/167 (28%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE------------NTTAL------- 251
ETEF C ++N +C+ ++ CD PDC D +DE +T A+
Sbjct: 201 ETEFAC---HSYN--ECVALEYRCDRRPDCRDMSDELNCEEPVPELSSSTPAVGKVSPLP 255
Query: 252 ----------------------NCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
+ P S+C P + SC +G CI +LCD DC DGSD
Sbjct: 256 LWPEAATTPPPPVTHGPQFLLPSVPGPSACGPQEASCHSGHCIPRDYLCDGQEDCRDGSD 315
Query: 290 EGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
E C C EFAC+N C K + CDG+ DC DR+DE NC+
Sbjct: 316 E-LGCASP-PPCEPNEFACENGHCALKLWRCDGDFDCEDRTDEANCS 360
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 299 RTCSSEEFACQNF-KCIRKTYHCDGEDDCGDRSDEFNC 335
R C+ EFAC ++ +C+ Y CD DC D SDE NC
Sbjct: 197 RVCTETEFACHSYNECVALEYRCDRRPDCRDMSDELNC 234
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 107/255 (41%), Gaps = 53/255 (20%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPP--GELG--VPGH 176
CD ++F C +GKCI W CDG +C D SDE C G Q G L +P
Sbjct: 27 CDRNEFQCGDGKCIPYKWICDGSAECKDGSDESSETCRALTCGADQFSCGGRLNRCIPMS 86
Query: 177 VQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAW-------------- 222
+ G T + G + RK + +FTC K
Sbjct: 87 WKCDG----------QTDCENGSDENDCTRKVCADDQFTCRSGKCISLDFVCDQDQDCDD 136
Query: 223 --------------------NRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS--SCS 260
++ CIPK W CDGD DC DG+DE+ P ++ C+
Sbjct: 137 GSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDCEDGSDEDHCEGREPIKTDKPCA 196
Query: 261 PDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHC 320
P +F CG+G CI+ W CD DC SD+ K+C TC ++F C + CI + C
Sbjct: 197 PLEFHCGSGECIHMSWKCDAGYDCKHKSDD-KDCVKP--TCRPDQFQCNDGTCIHGSRQC 253
Query: 321 DGEDDCGDRSDEFNC 335
D E DC D SDE C
Sbjct: 254 DREYDCKDLSDEEGC 268
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF +T+ + ++WTD++ ++ A++ TG N++++ + L SP DI +Y Q + N
Sbjct: 605 HPFGLTIFEDLVFWTDIENEAIFSAKRLTGENIMKVAEHLL-SPEDIVLYHNLRQPKAEN 663
Query: 77 PCNIH---NGGCAQSCHPGPNGTAE-----CKCDESTKLVNEGRMCVAKNIT 120
C H NGGC C P P+ A C C + L + R C+ + +T
Sbjct: 664 WCESHHLGNGGCGYLCLPAPHVNARSPKFTCACPDGMHLGTDMRNCMKEPVT 715
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 120 TCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
TC+ + F C++ G CI ++W+CDGD DC D SDED +C + P + P
Sbjct: 147 TCNPAMFQCKDKGICIPKLWACDGDRDCEDGSDED--HCE------GREPIKTDKPCAPL 198
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRK-CDEET----EFTCTENKAWNRAQCIPKKWL 233
I M H ++ K C + T +F C N CI
Sbjct: 199 EFHCGSGECIHMSWKCDAGYDCKHKSDDKDCVKPTCRPDQFQC------NDGTCIHGSRQ 252
Query: 234 CDGDPDCVDGADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDCGDGSDEG- 291
CD + DC D +DE C + C PD F C +G CI +C DC D +DE
Sbjct: 253 CDREYDCKDLSDEE----GCVNVTKCQGPDVFKCRSGECITMDKVCHKKRDCRDWTDEPI 308
Query: 292 KEC 294
KEC
Sbjct: 309 KEC 311
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 110 EGRMCVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDE 152
EGR + + C +F C +G+CI W CD DC SD+
Sbjct: 184 EGREPIKTDKPCAPLEFHCGSGECIHMSWKCDAGYDCKHKSDD 226
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 111/267 (41%), Gaps = 72/267 (26%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ- 178
TCD ++F CR+GKCI+ W CDG +C D SDE C V+ E G V
Sbjct: 26 TCDRNEFRCRDGKCIASKWVCDGSPECPDGSDESSETC----MSVTCQSKEFSCGGRVSR 81
Query: 179 -ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWL 233
I + G QT N + + C +T EF C + K CI +K++
Sbjct: 82 CIPNSWRCDG--------QTDCENGSDEQGCAPKTCSQDEFRCQDGK------CISQKFV 127
Query: 234 CDGDPDCVDGADE---------------NTTA----------------------LNCP-- 254
CD D DCVDG+DE N++A NC
Sbjct: 128 CDQDQDCVDGSDEAHCQAATCGPAHFRCNSSACIPSLWACDGDDDCEDGSDEWPQNCGGR 187
Query: 255 ------KQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC 308
S CS +F CG+ CI+ W+CD DC D SDE H TC +EF C
Sbjct: 188 DTAAAWSSSPCSSLEFHCGSSECIHRSWVCDGSADCKDKSDEE---HCVTATCRPDEFQC 244
Query: 309 QNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ CI + CD E DC D SDE C
Sbjct: 245 ADGTCIHGSRQCDREYDCKDMSDELGC 271
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 94/226 (41%), Gaps = 37/226 (16%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC +F C++GKCIS+ + CD D DC D SDE +C G P H +
Sbjct: 108 TCSQDEFRCQDGKCISQKFVCDQDQDCVDGSDE--AHCQAATCG----------PAHFRC 155
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCD-------------EETEFTCTENKAWNRAQ 226
+ P + + + C EF C ++
Sbjct: 156 NSSACIPSLWACDGDDDCEDGSDEWPQNCGGRDTAAAWSSSPCSSLEFHC------GSSE 209
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CI + W+CDG DC D +DE ++C PD+F C +G CI+ CD + DC D
Sbjct: 210 CIHRSWVCDGSADCKDKSDEEHCV-----TATCRPDEFQCADGTCIHGSRQCDREYDCKD 264
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
SDE C + + +F C + +CI CD DC D SDE
Sbjct: 265 MSDE-LGCINVTQCDGPNKFKCHSGECIALDKVCDSMRDCRDWSDE 309
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 256 QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC--QNFKC 313
+ +C ++F C +G+CI + W+CD +C DGSDE E TC S+EF+C + +C
Sbjct: 24 EDTCDRNEFRCRDGKCIASKWVCDGSPECPDGSDESSETCMSV-TCQSKEFSCGGRVSRC 82
Query: 314 IRKTYHCDGEDDCGDRSDEFNC 335
I ++ CDG+ DC + SDE C
Sbjct: 83 IPNSWRCDGQTDCENGSDEQGC 104
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF++ ++ + ++WTD+ ++ A + TG++ + +V SP DI ++ +Q VN
Sbjct: 607 HPFSLAIYEDKVFWTDVINEAIFSANRLTGSD-VNLVAENLLSPEDIVLFHNITQPRGVN 665
Query: 77 PCN---IHNGGCAQSCHPGP-----NGTAECKCDESTKLVNEGRMC---VAKNITCDGSK 125
C + NGGC C P P + C C + L + R C VA +T G+
Sbjct: 666 WCERTALPNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAKDMRSCLTEVAPVLTTQGTS 725
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ-ITGVSQPPGELG---VPGHVQITG 181
+ +D ++ P V+ +T Q G+ P V +
Sbjct: 726 TIRPEITAGAEGLPKHKEDQSASSTSRQPALSTVESVTMSHQVQGDRRNEERPQGVGVLS 785
Query: 182 VSQPPGIVMVMT 193
++ P +V+++
Sbjct: 786 ITLPIALVILLV 797
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 102/255 (40%), Gaps = 45/255 (17%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQ----PPGELGVPG 175
TC S F C NG CI W CDG+++C D SDE C Q+ + P VP
Sbjct: 85 TCADSDFTCDNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
Query: 176 HVQITGVSQPPG------------------------IVMVMTTVQTGLMNHPNNRKCDEE 211
+ G G + + + + R C +
Sbjct: 145 SWRCDGEKDCEGGADEAGCATLCAPHEFQCGNRSCLAAVFVCDGDDDCGDGSDERGCADP 204
Query: 212 T----EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSP------ 261
EF C + CIP++W+CD DC D +DE P + S
Sbjct: 205 ACGPREFRCGGDGG---GACIPERWVCDRQFDCEDRSDEAAELCGRPGPGATSAPAACAT 261
Query: 262 -DQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHC 320
QF+C +G C++ GW CD D DC D SDE +C TC +EF C + C+ HC
Sbjct: 262 ASQFACRSGECVHLGWRCDGDRDCKDKSDEA-DC--PLGTCRGDEFQCGDGTCVLAIKHC 318
Query: 321 DGEDDCGDRSDEFNC 335
+ E DC D SDE C
Sbjct: 319 NQEQDCPDGSDEAGC 333
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 104/277 (37%), Gaps = 91/277 (32%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C+ +F CRN +CI +W CD DDDC D+SDED C + S
Sbjct: 47 CEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDD--CPKKTCADSD-------------- 90
Query: 181 GVSQPPGIVMVMTTVQTGLMNHPNNRKCD---------EETEFTCTENK--------AWN 223
T G H KCD +E+E TCT+
Sbjct: 91 ------------FTCDNGHCIH-ERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPT 137
Query: 224 RAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS-------------------------- 257
+C+P W CDG+ DC GADE A C
Sbjct: 138 SHKCVPASWRCDGEKDCEGGADEAGCATLCAPHEFQCGNRSCLAAVFVCDGDDDCGDGSD 197
Query: 258 -------SCSPDQFSC---GNGRCINTGWLCDHDNDCGDGSDEGKEC---------HDKY 298
+C P +F C G G CI W+CD DC D SDE E
Sbjct: 198 ERGCADPACGPREFRCGGDGGGACIPERWVCDRQFDCEDRSDEAAELCGRPGPGATSAPA 257
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
++ +FAC++ +C+ + CDG+ DC D+SDE +C
Sbjct: 258 ACATASQFACRSGECVHLGWRCDGDRDCKDKSDEADC 294
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 3 IATGASMVLISATIY---PFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDS 59
+ G LIS+T + PF I V + ++WTDL+ ++ A + G + + + L ++
Sbjct: 613 FSGGNRKTLISSTDFLSHPFGIAVFEDKVFWTDLENEAIFSANRLNGLEISILAENL-NN 671
Query: 60 PRDIHVYSADSQKCSVNPCNIH---NGGCAQSCHPGPNGTAE-----CKCDESTKLVNEG 111
P DI ++ Q + + C + NGGC C P P ++ C C ++ L +
Sbjct: 672 PHDIVIFHELKQPRAPDACELSVQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDM 731
Query: 112 RMC 114
+ C
Sbjct: 732 KRC 734
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ C ++F C+N +CI + CD +DDC D SDE +C
Sbjct: 45 KDCEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDC 81
>sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2
Length = 5146
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 109/271 (40%), Gaps = 56/271 (20%)
Query: 99 CKCDESTKLV-NEGRMCVAKNITCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNY 156
C C ES L ++G CV C + CR +G C+ W CD DDCGD SDE+
Sbjct: 1350 CTCRESQWLCGDDGGRCVEPGPGCAEGETPCRESGHCVPHGWLCDNQDDCGDGSDEE--G 1407
Query: 157 CNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTC 216
C ++ G G V P +++ G C +++ TC
Sbjct: 1408 CATRVCGE----------GQVSCCSGRCLPLVLLCDGQDDCGDGMDEQGCPCPQDS-LTC 1456
Query: 217 TENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGW 276
+ C+P LCDG PDC DGADE + C Q C+P + SC +G C+
Sbjct: 1457 ADG------HCLPPARLCDGHPDCPDGADEES----CLGQVDCAPGEVSCVDGTCLGAIQ 1506
Query: 277 LCDHDNDCGDGSDEGK-------------------------------ECHDKYRTCSSEE 305
LCD DC DG DEG C +
Sbjct: 1507 LCDGVWDCLDGGDEGPGHCPLPSLPTPPAGTLPGPSAVSWKLHLPPWPVSALRLPCGPLD 1566
Query: 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
FAC + +C + + CDGE+DC D SDE C+
Sbjct: 1567 FACGSGECAPRGWRCDGEEDCADGSDESGCD 1597
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 36/218 (16%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV 177
+ C + C +G C+ + CDG DC D DE P +C + + PP +PG
Sbjct: 1486 QVDCAPGEVSCVDGTCLGAIQLCDGVWDCLDGGDEGPGHCP--LPSLPTPPAGT-LPGPS 1542
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
++ P + + G ++ F C +C P+ W CDG+
Sbjct: 1543 AVSWKLHLPPWPVSALRLPCGPLD------------FAC------GSGECAPRGWRCDGE 1584
Query: 238 PDCVDGADENTTALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKECHD 296
DC DG+DE+ C+P C G C+ LCD C DGSDE +
Sbjct: 1585 EDCADGSDESGC------DRPCAPHHAPCARGSHCVAAEQLCDGVPHCPDGSDEDPGACE 1638
Query: 297 KYRT--------CSSEEFACQNFKCIRKTYHCDGEDDC 326
+ + E++C + CI CDG+ DC
Sbjct: 1639 RLQAPGGPNRTGLPCPEYSCPDGLCIGFQQVCDGQPDC 1676
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 105/300 (35%), Gaps = 94/300 (31%)
Query: 91 PGPN-GTAECKCDESTKLVNEGRMCVAKNITCDGS-------------KFFCRNGKCISR 136
PGP E C ES V G +C ++ DGS + C +G+C+
Sbjct: 1369 PGPGCAEGETPCRESGHCVPHGWLCDNQDDCGDGSDEEGCATRVCGEGQVSCCSGRCLPL 1428
Query: 137 MWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQ 196
+ CDG DDCGD DE C + G + +
Sbjct: 1429 VLLCDGQDDCGDGMDEQGCPCPQDSLTCAD--------------------GHCLPPARLC 1468
Query: 197 TGLMNHPNNRKCDEET----------EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE 246
G + P+ DEE+ E +C + C+ LCDG DC+DG DE
Sbjct: 1469 DGHPDCPDGA--DEESCLGQVDCAPGEVSCVDGT------CLGAIQLCDGVWDCLDGGDE 1520
Query: 247 NTTALNCPKQS-------------------------------SCSPDQFSCGNGRCINTG 275
+CP S C P F+CG+G C G
Sbjct: 1521 GPG--HCPLPSLPTPPAGTLPGPSAVSWKLHLPPWPVSALRLPCGPLDFACGSGECAPRG 1578
Query: 276 WLCDHDNDCGDGSDEG---KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
W CD + DC DGSDE + C + C+ + C+ CDG C D SDE
Sbjct: 1579 WRCDGEEDCADGSDESGCDRPCAPHHAPCA------RGSHCVAAEQLCDGVPHCPDGSDE 1632
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 25/166 (15%)
Query: 142 GDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMN 201
G G P +T SQP + P ++ V+ P MV V G
Sbjct: 2317 GPASLGSEPHPSPGGSVQTVTPTSQPEAQALRP---EMAAVTVLPPHPMVTPEVPAGRST 2373
Query: 202 HPNNRKCDEETEFTCTENKAWNRAQ-CIPKKWLCDGDPDCVDGADENTTALNC------- 253
P C+ + C+ + LCDG DC+DG+DE A
Sbjct: 2374 TPGPFP-----HVQCSPGQVPCEVLGCVELEQLCDGREDCLDGSDERPCAWAAGTVPFTV 2428
Query: 254 ---------PKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
+ CSP Q +CG+G C+ CD DC DGSDE
Sbjct: 2429 PTTTLPGLPASRDLCSPSQLTCGSGECLPVERRCDLQLDCQDGSDE 2474
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 20/96 (20%)
Query: 259 CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECH-------------------DKYR 299
CSP Q C C+ LCD DC DGSDE + C
Sbjct: 2383 CSPGQVPCEVLGCVELEQLCDGREDCLDGSDE-RPCAWAAGTVPFTVPTTTLPGLPASRD 2441
Query: 300 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
CS + C + +C+ CD + DC D SDE C
Sbjct: 2442 LCSPSQLTCGSGECLPVERRCDLQLDCQDGSDENGC 2477
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 81/225 (36%), Gaps = 39/225 (17%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQIT 180
C G C +G+C R CDG +DC D SDE+ G PP G ++ T
Sbjct: 2226 CLGVGHRCVSGECAPRGAPCDGVEDCKDGSDEE---------GCVTPPAGA---GRIEST 2273
Query: 181 GVSQPPGIVMVMTTVQTG-LMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
S P ++ Q G L P+ + E + W+ + P G
Sbjct: 2274 AWSSAP------SSAQPGQLPPQPSEGLAEAEADH-------WHPGRGSPVPPTGKGPAS 2320
Query: 240 C-------VDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK 292
G+ + T + P+ + P+ + + + + G + G
Sbjct: 2321 LGSEPHPSPGGSVQTVTPTSQPEAQALRPEMAAV---TVLPPHPMVTPEVPAGRSTTPGP 2377
Query: 293 ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCNY 337
H + CS + C+ C+ CDG +DC D SDE C +
Sbjct: 2378 FPHVQ---CSPGQVPCEVLGCVELEQLCDGREDCLDGSDERPCAW 2419
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 109/267 (40%), Gaps = 72/267 (26%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ- 178
+C ++F CR+GKCI W CDG +C D SDE P C V+ GE G V
Sbjct: 26 SCGKNEFQCRDGKCIVSKWVCDGSRECPDGSDESPETC----MSVTCRSGEFSCGGRVSR 81
Query: 179 -ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQCIPKKWL 233
I + G +T N + C +T EF C + K CI ++++
Sbjct: 82 CIPDSWRCDG--------RTDCENGSDELDCSPKTCSLDEFRCQDGK------CISRQFV 127
Query: 234 CDGDPDCVDGADENTTAL-------------------------------------NCPKQ 256
CD D DC+DG+DE A NC +
Sbjct: 128 CDQDWDCLDGSDEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEWPQNCGAE 187
Query: 257 --------SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC 308
S CS +F CG+ CI+ W+CD DC D SDE + C TC +EF C
Sbjct: 188 DTAAEVVSSPCSSLEFHCGSSECIHRSWVCDGAADCKDKSDE-ENC--AVTTCRPDEFQC 244
Query: 309 QNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ CI + CD E DC D SDE C
Sbjct: 245 ADGSCIHGSRQCDREHDCKDMSDELGC 271
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 98/226 (43%), Gaps = 37/226 (16%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
TC +F C++GKCISR + CD D DC D SDE +C G P H +
Sbjct: 108 TCSLDEFRCQDGKCISRQFVCDQDWDCLDGSDE--AHCAATTCG----------PAHFRC 155
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEE-------------TEFTCTENKAWNRAQ 226
S P + + + C E EF C ++
Sbjct: 156 NSSSCIPSLWACDGDRDCDDGSDEWPQNCGAEDTAAEVVSSPCSSLEFHC------GSSE 209
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CI + W+CDG DC D +DE A+ ++C PD+F C +G CI+ CD ++DC D
Sbjct: 210 CIHRSWVCDGAADCKDKSDEENCAV-----TTCRPDEFQCADGSCIHGSRQCDREHDCKD 264
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
SDE C + + +F C + +CI C+ DC D SDE
Sbjct: 265 MSDE-LGCINVTQCDGPNKFKCHSGECISLDKVCNSARDCRDWSDE 309
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 256 QSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC--QNFKC 313
+ SC ++F C +G+CI + W+CD +C DGSDE E TC S EF+C + +C
Sbjct: 24 EDSCGKNEFQCRDGKCIVSKWVCDGSRECPDGSDESPETCMSV-TCRSGEFSCGGRVSRC 82
Query: 314 IRKTYHCDGEDDCGDRSDEFNCN 336
I ++ CDG DC + SDE +C+
Sbjct: 83 IPDSWRCDGRTDCENGSDELDCS 105
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF++ ++ + +YWTD+ ++ A + TG+++ + K L SP DI ++ +Q VN
Sbjct: 607 HPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKNLM-SPEDIVLFHNVTQPRGVN 665
Query: 77 PCN---IHNGGCAQSCHPGPNGTAE-----CKCDESTKLVNEGRMCVAK 117
C + NGGC C P P +A C C + L + R C+ +
Sbjct: 666 WCEATVLPNGGCQYMCLPAPQISAHSPKFTCACPDGMLLAKDMRSCLPE 714
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 68 ADSQKCSVNPCNIHNGGCAQ-SCHPGPNGTAECKCDESTKLVNEGRMCVAKNIT-CDG-S 124
+D + C+V C CA SC +G+ +C + K +++ C+ N+T CDG +
Sbjct: 227 SDEENCAVTTCRPDEFQCADGSC---IHGSRQCDREHDCKDMSDELGCI--NVTQCDGPN 281
Query: 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCN 158
KF C +G+CIS C+ DC D SDE C
Sbjct: 282 KFKCHSGECISLDKVCNSARDCRDWSDEPIKECK 315
>sp|A4IHY6|LRAD3_XENTR Low-density lipoprotein receptor class A domain-containing protein
3 OS=Xenopus tropicalis GN=ldlrad3 PE=2 SV=1
Length = 337
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 188 IVMVMTTVQTGLMNHPNNR-KCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADE 246
+ +++ +V++ L+ N+ +C+ F C+ + CIP W CDG+PDC D +DE
Sbjct: 4 LYLILGSVESQLLPGNNHTTECNIPGNFMCSNGR------CIPGGWQCDGNPDCFDESDE 57
Query: 247 NTTALNCPK-QSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSE 304
CP+ +S C P+ F C +G CI + C+ DC DGSDE + C CS+
Sbjct: 58 K----ECPRARSRCGPNFFPCTSGIHCIIARFQCNGFEDCPDGSDE-ENCTAHPLLCSNS 112
Query: 305 EFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
F C+N CI K++ CDG+++C D SDE +C+
Sbjct: 113 RFHCKNHLCIDKSFVCDGQNNCLDNSDEEHCH 144
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED 153
C A + C S+F C+N CI + + CDG ++C DNSDE+
Sbjct: 102 CTAHPLLCSNSRFHCKNHLCIDKSFVCDGQNNCLDNSDEE 141
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDE 152
F C NG+CI W CDG+ DC D SDE
Sbjct: 31 FMCSNGRCIPGGWQCDGNPDCFDESDE 57
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 119/291 (40%), Gaps = 70/291 (24%)
Query: 5 TGASMVLI--SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRD 62
+GA+ +++ S + P +TV N++YW D Q + + + + TG V+ D
Sbjct: 1132 SGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDM-TGREGRTKVQARIAQLSD 1190
Query: 63 IH-VYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITC 121
IH V + Q+ +PC NGGC+ C +GT C C L+ + C + TC
Sbjct: 1191 IHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSC-GEPPTC 1249
Query: 122 DGSKFFCRNGK--CISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+F C G+ CI W CDG +C D+SDE
Sbjct: 1250 SPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDE--------------------------- 1282
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
+N P C E ++F C + CI C+GD +
Sbjct: 1283 --------------------LNCP---VCSE-SQFQCASGQ------CIDGALRCNGDAN 1312
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
C D +DE NC + C DQF C NG+CI CDH+ DC D SDE
Sbjct: 1313 CQDKSDEK----NC--EVLCLIDQFRCANGQCIGKHKKCDHNVDCSDKSDE 1357
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 65/123 (52%), Gaps = 15/123 (12%)
Query: 213 EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCI 272
+FTC + CIP W CDG +C D +DE LNCP CS QF C +G+CI
Sbjct: 1253 QFTCFTGEI----DCIPVAWRCDGFTECEDHSDE----LNCP---VCSESQFQCASGQCI 1301
Query: 273 NTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+ C+ D +C D SDE K C C ++F C N +CI K CD DC D+SDE
Sbjct: 1302 DGALRCNGDANCQDKSDE-KNCE---VLCLIDQFRCANGQCIGKHKKCDHNVDCSDKSDE 1357
Query: 333 FNC 335
+C
Sbjct: 1358 LDC 1360
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 5 TGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIH 64
T V+ + +PFA+T+ + +YWTD + K+TG + E+ + SP DIH
Sbjct: 214 TNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIF-SPMDIH 272
Query: 65 VYSADSQKCSVNPCNIHNGGCAQSCHPGP-NGTAECKCDESTKLVNEGRMC 114
+S Q + NPC I NGGC+ C P +C C KL+ G+ C
Sbjct: 273 AFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTC 323
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 251 LNCPKQSSCSPDQFSCGNGR--CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC 308
L+C + +CSP QF+C G CI W CD +C D SDE C CS +F C
Sbjct: 1241 LSCGEPPTCSPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDE-LNCP----VCSESQFQC 1295
Query: 309 QNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ +CI C+G+ +C D+SDE NC
Sbjct: 1296 ASGQCIDGALRCNGDANCQDKSDEKNC 1322
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF +T +++YIYWTD R + RA K +G N + L D DI V+ + S++ N
Sbjct: 834 HPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHL-DYVMDILVFHS-SRQSGWN 891
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116
C NG C+ C P G C C L + R C A
Sbjct: 892 ECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 931
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 5 TGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLED----SP 60
TG +++ + F T+ +Y+YWTD Q R + R K + + ++ +L D
Sbjct: 522 TGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREV-IIDQLPDLMGLKA 580
Query: 61 RDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116
++H + NPC NGGC+ C P G C C +L+++ + C+
Sbjct: 581 TNVH------RVIGSNPCAEENGGCSHLCLYRPQGL-RCACPIGFELISDMKTCIV 629
>sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2 SV=1
Length = 5141
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 109/271 (40%), Gaps = 56/271 (20%)
Query: 99 CKCDESTKLVN-EGRMCVAKNITCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNY 156
C C ES N G C C + CR +G C+ W CD DDCGD SDE+
Sbjct: 1358 CTCQESQWHCNPSGAPCEEMEPGCAEGEALCRESGHCVPLEWLCDNQDDCGDGSDEE--G 1415
Query: 157 CNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTC 216
C+ + G Q +S G + ++ + G + + DE+
Sbjct: 1416 CDTSVCGEGQ---------------MSCQSGRCLPLSLICDGQDDCGDGT--DEQGCLCP 1458
Query: 217 TENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGW 276
A +C+P LCDG PDC+D ADE + C SC+ + SC +G CI T
Sbjct: 1459 QGFLACADGRCLPPALLCDGHPDCLDAADEES----CLGWVSCTSGEVSCVDGPCIRTIQ 1514
Query: 277 LCDHDNDCGDGSDEGK-ECHDK------------------------------YRTCSSEE 305
LCD DC DG+DEG C CS E
Sbjct: 1515 LCDGVWDCPDGADEGPVHCSSPSLPTPPAGIGQNPSTSSPDTSPSPVGSASPASPCSLSE 1574
Query: 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
F C + +C + + CD E+DC D SDE +C
Sbjct: 1575 FQCNSGECTPRGWRCDREEDCTDGSDELDCG 1605
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 185 PPGIVMVM-----TTVQTGLMNHPNNRKCDEETEFTCTENKAWNR--AQCIPKKWLCDGD 237
PPG V+ T ++ +P+ C EE E C E +A R C+P +WLCD
Sbjct: 1346 PPGAVLQKDCGNCTCQESQWHCNPSGAPC-EEMEPGCAEGEALCRESGHCVPLEWLCDNQ 1404
Query: 238 PDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDK 297
DC DG+DE S C Q SC +GRC+ +CD +DCGDG+DE +
Sbjct: 1405 DDCGDGSDEEGC-----DTSVCGEGQMSCQSGRCLPLSLICDGQDDCGDGTDE------Q 1453
Query: 298 YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C AC + +C+ CDG DC D +DE +C
Sbjct: 1454 GCLCPQGFLACADGRCLPPALLCDGHPDCLDAADEESC 1491
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
++C + C +G CI + CDG DC D +DE P +C+ + PP +G
Sbjct: 1495 VSCTSGEVSCVDGPCIRTIQLCDGVWDCPDGADEGPVHCSS--PSLPTPPAGIGQ----- 1547
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDP 238
+ + +EF C N +C P+ W CD +
Sbjct: 1548 --------NPSTSSPDTSPSPVGSASPASPCSLSEFQC------NSGECTPRGWRCDREE 1593
Query: 239 DCVDGADENTTALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKE-CHD 296
DC DG+DE L+C C Q C +G C++ G LCD C DGSDE + C +
Sbjct: 1594 DCTDGSDE----LDC--GGPCKLYQMPCAHGPHCLSPGQLCDGVAQCPDGSDEDPDVCEE 1647
Query: 297 KYRT-------CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
+ + EF+C N CI CDG DC + +DE
Sbjct: 1648 RSASGGPNGTAVPCPEFSCPNGTCIDFLLVCDGSPDC-ELADE 1689
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 227 CIPKKWLCDGDPDCVDGADEN-----------TTAL-NCP-KQSSCSPDQFSCGNGRCIN 273
C+ ++ LCDG DC+DG+DE TTAL P ++ CSP Q SCG+G C+
Sbjct: 2404 CVEQEQLCDGREDCLDGSDEQHCASPEPFTVPTTALPGLPASRALCSPSQLSCGSGECLP 2463
Query: 274 TGWLCDHDNDCGDGSDE 290
CD +C DGSDE
Sbjct: 2464 LEHRCDLQVNCQDGSDE 2480
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 15/92 (16%)
Query: 259 CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRT---------------CSS 303
C P Q C C+ LCD DC DGSDE + T CS
Sbjct: 2392 CGPGQVPCDVLGCVEQEQLCDGREDCLDGSDEQHCASPEPFTVPTTALPGLPASRALCSP 2451
Query: 304 EEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ +C + +C+ + CD + +C D SDE +C
Sbjct: 2452 SQLSCGSGECLPLEHRCDLQVNCQDGSDEDDC 2483
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 263 QFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC-QNFKCIRKTYHCD 321
Q CGN C + W C+ G C + C+ E C ++ C+ + CD
Sbjct: 1352 QKDCGNCTCQESQWHCN---------PSGAPCEEMEPGCAEGEALCRESGHCVPLEWLCD 1402
Query: 322 GEDDCGDRSDEFNCN 336
+DDCGD SDE C+
Sbjct: 1403 NQDDCGDGSDEEGCD 1417
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED 153
C G++ C NG C + CDG DC D SDE+
Sbjct: 2236 CPGTRHRCANGDCALKGGPCDGAVDCEDGSDEE 2268
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 117/291 (40%), Gaps = 70/291 (24%)
Query: 5 TGASMVLI--SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRD 62
+GA+ +++ S + P +TV N++YW D Q + + + + TG V+ D
Sbjct: 1132 SGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDM-TGREGRTKVQARIAQLSD 1190
Query: 63 IH-VYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITC 121
IH V + Q+ +PC NGGC+ C +GT C C L+ + C + TC
Sbjct: 1191 IHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSC-GEPPTC 1249
Query: 122 DGSKFFCRNG--KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+F C G CI W CDG +C D+SDE
Sbjct: 1250 SPQQFTCFTGDIDCIPVAWRCDGFTECEDHSDE--------------------------- 1282
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPD 239
+N P C E ++F C + CI C+GD +
Sbjct: 1283 --------------------LNCP---VCSE-SQFQCASGQ------CIDGALRCNGDAN 1312
Query: 240 CVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
C D +DE NC + C DQF C NG+C+ CDH DC D SDE
Sbjct: 1313 CQDKSDEK----NC--EVLCLIDQFRCANGQCVGKHKKCDHSVDCSDRSDE 1357
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286
CIP W CDG +C D +DE LNCP CS QF C +G+CI+ C+ D +C D
Sbjct: 1263 CIPVAWRCDGFTECEDHSDE----LNCP---VCSESQFQCASGQCIDGALRCNGDANCQD 1315
Query: 287 GSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
SDE K C C ++F C N +C+ K CD DC DRSDE +C
Sbjct: 1316 KSDE-KNCE---VLCLIDQFRCANGQCVGKHKKCDHSVDCSDRSDELDC 1360
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 5 TGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIH 64
T V+ + +PFA+T+ + +YWTD + K+TG + E+ + SP DIH
Sbjct: 214 TNRQAVVKGSLPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGLREIHSNIF-SPMDIH 272
Query: 65 VYSADSQKCSVNPCNIHNGGCAQSCHPGP-NGTAECKCDESTKLVNEGRMC 114
+S Q + NPC I NGGC+ C P +C C KL+ G+ C
Sbjct: 273 AFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLMENGKTC 323
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 251 LNCPKQSSCSPDQFSCGNG--RCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC 308
L+C + +CSP QF+C G CI W CD +C D SDE C CS +F C
Sbjct: 1241 LSCGEPPTCSPQQFTCFTGDIDCIPVAWRCDGFTECEDHSDE-LNCP----VCSESQFQC 1295
Query: 309 QNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ +CI C+G+ +C D+SDE NC
Sbjct: 1296 ASGQCIDGALRCNGDANCQDKSDEKNC 1322
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVN 76
+PF +T +++YIYWTD R + RA K +G N + L D DI V+ + S++ N
Sbjct: 834 HPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHL-DYVMDILVFHS-SRQAGWN 891
Query: 77 PCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGK-CIS 135
C NG C+ C P G C C L + R C A S F + K I+
Sbjct: 892 ECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP------STFLLFSQKSAIN 945
Query: 136 RM 137
RM
Sbjct: 946 RM 947
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 5 TGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIH 64
TG +++ + F T+ +Y+YWTD Q R + R K + + + D D+
Sbjct: 522 TGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREV-----IIDQLPDLM 576
Query: 65 VYSADS--QKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116
A S + NPC NGGC+ C P G C C +L+ + + C+
Sbjct: 577 GLKATSVHRVIGSNPCAEDNGGCSHLCLYRPQGL-RCACPIGFELIGDMKTCIV 629
>sp|Q0IIH7|ST14_BOVIN Suppressor of tumorigenicity 14 protein homolog OS=Bos taurus
GN=ST14 PE=2 SV=1
Length = 855
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 207 KCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSC 266
KC+ +FTC + C P W+CD DC DG+DE + SC P+ F C
Sbjct: 487 KCNATYQFTCRDKF------CKPLFWVCDSVKDCEDGSDE--------EGCSCPPNTFKC 532
Query: 267 GNGRCINTGWLCDHDNDCGDGSDEGKECHD-KYRTCSSEEFACQNFKCIRKTY-HCDGED 324
GNG+C+ CD +DCGDGSDE K C D K C+ C N C+ K+ CDG +
Sbjct: 533 GNGKCLPQSQQCDRKDDCGDGSDEAK-CQDGKAVPCTEHTHRCLNGLCVDKSNPQCDGNE 591
Query: 325 DCGDRSDEFNCN 336
DC D SDE +C+
Sbjct: 592 DCTDGSDEKDCD 603
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 70/205 (34%), Gaps = 81/205 (39%)
Query: 109 NEGRMCVAKNITCDG------------------SKFFCRNGKCISRMWSCDGDDDCGDNS 150
N GR C+ K + CDG +F CR+ C W CD DC D S
Sbjct: 460 NTGR-CIRKELRCDGWADCTDYSDELDCKCNATYQFTCRDKFCKPLFWVCDSVKDCEDGS 518
Query: 151 DEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDE 210
DE+ G S P PN KC
Sbjct: 519 DEE---------GCSCP-----------------------------------PNTFKC-- 532
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
+C+P+ CD DC DG+DE K C+ C NG
Sbjct: 533 ------------GNGKCLPQSQQCDRKDDCGDGSDEAKCQDG--KAVPCTEHTHRCLNGL 578
Query: 271 CIN-TGWLCDHDNDCGDGSDEGKEC 294
C++ + CD + DC DGSDE K+C
Sbjct: 579 CVDKSNPQCDGNEDCTDGSDE-KDC 602
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 98 ECKCDESTKLVNEGRMCVAKNITCDGSK-----------------FFCRNGKCISRMWSC 140
+CKC+ + + + C CD K F C NGKC+ + C
Sbjct: 485 DCKCNATYQFTCRDKFCKPLFWVCDSVKDCEDGSDEEGCSCPPNTFKCGNGKCLPQSQQC 544
Query: 141 DGDDDCGDNSDE 152
D DDCGD SDE
Sbjct: 545 DRKDDCGDGSDE 556
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
F C +CIRK CDG DC D SDE +C
Sbjct: 457 FMCNTGRCIRKELRCDGWADCTDYSDELDCK 487
>sp|A2AR95|LRAD3_MOUSE Low-density lipoprotein receptor class A domain-containing protein
3 OS=Mus musculus GN=Ldlrad3 PE=1 SV=1
Length = 345
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPK-QSSCSPDQFSCGNG-RCINTGWLCDHDN 282
+CIP W CDG PDC D +DE CPK +S C P F C +G CI + C+
Sbjct: 40 GRCIPGAWQCDGLPDCFDKSDEK----ECPKAKSKCGPTFFPCASGIHCIIGRFRCNGFE 95
Query: 283 DCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DC DGSDE + C CS+ + C+N CI K++ CDG+++C D SDE +C
Sbjct: 96 DCPDGSDE-ENCTANPLLCSTARYHCRNGLCIDKSFICDGQNNCQDNSDEESC 147
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED 153
C A + C +++ CRNG CI + + CDG ++C DNSDE+
Sbjct: 106 CTANPLLCSTARYHCRNGLCIDKSFICDGQNNCQDNSDEE 145
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDE 152
F C NG+CI W CDG DC D SDE
Sbjct: 35 FMCSNGRCIPGAWQCDGLPDCFDKSDE 61
>sp|Q86YD5|LRAD3_HUMAN Low-density lipoprotein receptor class A domain-containing protein
3 OS=Homo sapiens GN=LDLRAD3 PE=2 SV=3
Length = 345
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 225 AQCIPKKWLCDGDPDCVDGADENTTALNCPK-QSSCSPDQFSCGNG-RCINTGWLCDHDN 282
+CIP W CDG PDC D +DE CPK +S C P F C +G CI + C+
Sbjct: 40 GRCIPGAWQCDGLPDCFDKSDEK----ECPKAKSKCGPTFFPCASGIHCIIGRFRCNGFE 95
Query: 283 DCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
DC DGSDE + C CS+ + C+N CI K++ CDG+++C D SDE +C
Sbjct: 96 DCPDGSDE-ENCTANPLLCSTARYHCKNGLCIDKSFICDGQNNCQDNSDEESC 147
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED 153
C A + C +++ C+NG CI + + CDG ++C DNSDE+
Sbjct: 106 CTANPLLCSTARYHCKNGLCIDKSFICDGQNNCQDNSDEE 145
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDE 152
F C NG+CI W CDG DC D SDE
Sbjct: 35 FMCSNGRCIPGAWQCDGLPDCFDKSDE 61
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 106/262 (40%), Gaps = 61/262 (23%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELG--VPGHVQ 178
C+ +F CRN +CI +W CD D+DC DNSDED C + S + G +P +
Sbjct: 41 CEEDQFRCRNERCIPLVWRCDEDNDCSDNSDEDD--CPKRTCADSDFTCDNGHCIPERWK 98
Query: 179 ITGVSQ-PPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
G + P G T ++ +C E + +C +C+P W CDG+
Sbjct: 99 CDGEEECPDGSDESKATC--------SSEECPAE-KLSCGPTSH----KCVPASWRCDGE 145
Query: 238 PDCVDGADENTTALNCPKQS---------------------------------SCSPDQF 264
DC GADE C +C P +F
Sbjct: 146 KDCEGGADEAGCPTLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREF 205
Query: 265 SCGNG-RCINTGWLCDHDNDCGDGSDEGKEC---------HDKYRTCSSEEFACQNFKCI 314
CG G CI W+CD DC D SDE E + +F C++ +CI
Sbjct: 206 RCGGGGTCIPERWVCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTCRSGECI 265
Query: 315 RKTYHCDGEDDCGDRSDEFNCN 336
+ CDG+ DC D+SDE +C+
Sbjct: 266 HLGWRCDGDRDCKDKSDEADCS 287
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 93/235 (39%), Gaps = 43/235 (18%)
Query: 114 CVAKNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED--PNYCNVQITGVSQPPGEL 171
C A+ ++C + KC+ W CDG+ DC +DE P C
Sbjct: 121 CPAEKLSCGPTSH-----KCVPASWRCDGEKDCEGGADEAGCPTLC-------------- 161
Query: 172 GVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEET----EFTCTENKAWNRAQC 227
P Q + S + + G + + R C + EF C C
Sbjct: 162 -APHEFQCSNRSCLASVFVCDGDDDCGDGS--DERGCSDPACPPREFRCGGG-----GTC 213
Query: 228 IPKKWLCDGDPDCVDGADENTTALNCPKQ-------SSCSPDQFSCGNGRCINTGWLCDH 280
IP++W+CD DC D +DE Q + QF+C +G CI+ GW CD
Sbjct: 214 IPERWVCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTCRSGECIHLGWRCDG 273
Query: 281 DNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
D DC D SDE +C C EF C + C+ C+ E DC D SDE C
Sbjct: 274 DRDCKDKSDEA-DCSPG--PCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGC 325
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 77/214 (35%), Gaps = 50/214 (23%)
Query: 120 TCDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
C +F C G CI W CD DC D SDE C
Sbjct: 199 ACPPREFRCGGGGTCIPERWVCDRQFDCEDRSDEAAELCG-------------------- 238
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDP 238
+ G C +FTC +CI W CDGD
Sbjct: 239 -----------------RAGQGTTATPAACAPTAQFTC------RSGECIHLGWRCDGDR 275
Query: 239 DCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKY 298
DC D +DE + C ++F CG+G C+ C+ + DC DGSDE C +
Sbjct: 276 DCKDKSDEADCS-----PGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAG-CLQES 329
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
F C++ +C+ CD + DC D SDE
Sbjct: 330 TCEGPRRFQCKSGECVDGGKVCDDQRDCRDWSDE 363
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 6 GASMVLISATIY---PFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRD 62
G +LI +T + PF + V + ++WTDL+ ++ A + G + + + L ++P D
Sbjct: 649 GNRKMLIFSTDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAENL-NNPHD 707
Query: 63 IHVYSADSQKCSVNPCNIH---NGGCAQSCHPGPNGTAE-----CKCDESTKLVNEGRMC 114
I ++ Q + + C++ NGGC C P P ++ C C ++ L + + C
Sbjct: 708 IVIFHELKQPKAADACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDMKRC 767
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ C ++F C+N +CI + CD ++DC D SDE +C
Sbjct: 39 KECEEDQFRCRNERCIPLVWRCDEDNDCSDNSDEDDC 75
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 89 CHPGPNGTAECKCDEST-----KLVNEGRMCV--------AKNITCDGSKFF-CRNGKCI 134
C PGP E +C + T K N+ R C + TC+G + F C++G+C+
Sbjct: 286 CSPGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRFQCKSGECV 345
Query: 135 SRMWSCDGDDDCGDNSDEDPNYCNV 159
CD DC D SDE C +
Sbjct: 346 DGGKVCDDQRDCRDWSDEPQKVCGL 370
>sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=2
Length = 4998
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 115/312 (36%), Gaps = 86/312 (27%)
Query: 80 IHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA--KNITCDGSKFFC--------- 128
+H G C + A C C+ G + N TC GS++ C
Sbjct: 1198 LHGGACMK--------LAACPCEWQGSFFPPGTVLQKDCGNCTCQGSQWHCDRGGAPCED 1249
Query: 129 -------------RNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPG 175
NG C+ W CD DDCGD SDE+ C + G Q
Sbjct: 1250 MEPGCAEGETLCRENGHCVPLEWLCDNQDDCGDGSDEE--GCATSVCGEGQ--------- 1298
Query: 176 HVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCD 235
+S G + ++ + G + + DE+ + A +C+P LC+
Sbjct: 1299 ------MSCQSGHCLPLSLICDGQDDCGDGT--DEQGCLCPHGSLACADGRCLPPALLCN 1350
Query: 236 GDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKE-- 293
G PDC+D ADE + C SC + SC +G C+ T LCD DC DG+DEG
Sbjct: 1351 GHPDCLDAADEES----CLGPVSCISGEVSCVDGTCVRTIQLCDGVWDCPDGADEGPSHC 1406
Query: 294 -----------------------------CHDKYRTCSSEEFACQNFKCIRKTYHCDGED 324
CS EF C + +C + + CD E+
Sbjct: 1407 SLPSLPTPPGGIGQNPSTSSLDTAPSPVGSTSPASPCSLLEFQCNSGECTPRGWRCDQEE 1466
Query: 325 DCGDRSDEFNCN 336
DC D SDE +C
Sbjct: 1467 DCTDGSDELDCG 1478
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGV-PGHV 177
++C + C +G C+ + CDG DC D +DE P++C+ + + PPG +G P
Sbjct: 1368 VSCISGEVSCVDGTCVRTIQLCDGVWDCPDGADEGPSHCS--LPSLPTPPGGIGQNPSTS 1425
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
+ P G + EF C N +C P+ W CD +
Sbjct: 1426 SLDTAPSPVGSTSPASPCSL--------------LEFQC------NSGECTPRGWRCDQE 1465
Query: 238 PDCVDGADENTTALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKE-CH 295
DC DG+DE L+C C Q C + C++ G LCD C DGSDE + C
Sbjct: 1466 EDCTDGSDE----LDC--GGPCMLYQVPCAHSPHCVSPGQLCDGVTQCPDGSDEDPDVCE 1519
Query: 296 DKYRTCSS-------EEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
++ + + EF+C + CI CDG DC + +DE
Sbjct: 1520 EQSASGGANRTGAPCPEFSCPDGTCIDFLLVCDGNPDC-ELADE 1562
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 91/256 (35%), Gaps = 78/256 (30%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C + C++G C+ CDG DDCGD +DE C P G L
Sbjct: 1293 VCGEGQMSCQSGHCLPLSLICDGQDDCGDGTDEQGCLC---------PHGSLAC-----A 1338
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNR-KCDEET----------EFTCTENKAWNRAQCI 228
G PP ++ HP+ DEE+ E +C + C+
Sbjct: 1339 DGRCLPPALLC---------NGHPDCLDAADEESCLGPVSCISGEVSCVDGT------CV 1383
Query: 229 PKKWLCDGDPDCVDGADENTTALNCPK-----------------------------QSSC 259
LCDG DC DGADE + + P S C
Sbjct: 1384 RTIQLCDGVWDCPDGADEGPSHCSLPSLPTPPGGIGQNPSTSSLDTAPSPVGSTSPASPC 1443
Query: 260 SPDQFSCGNGRCINTGWLCDHDNDCGDGSDE---GKECHDKYRTCSSEEFACQNFKCIRK 316
S +F C +G C GW CD + DC DGSDE G C C+ + C+
Sbjct: 1444 SLLEFQCNSGECTPRGWRCDQEEDCTDGSDELDCGGPCMLYQVPCA------HSPHCVSP 1497
Query: 317 TYHCDGEDDCGDRSDE 332
CDG C D SDE
Sbjct: 1498 GQLCDGVTQCPDGSDE 1513
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 227 CIPKKWLCDGDPDCVDGADEN-----------TTAL-NCP-KQSSCSPDQFSCGNGRCIN 273
C+ ++ LCDG DC+DG+DE TTAL P ++ CSP Q CG+G C+
Sbjct: 2255 CVEQEQLCDGREDCLDGSDEQHCASAEPFTVPTTALPGLPASKALCSPSQLRCGSGECLP 2314
Query: 274 TGWLCDHDNDCGDGSDE 290
CD +C DGSDE
Sbjct: 2315 FEHRCDLQVNCQDGSDE 2331
Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 259 CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRT---------------CSS 303
C P Q C C+ LCD DC DGSDE + T CS
Sbjct: 2243 CGPGQVPCDVLGCVEQEQLCDGREDCLDGSDEQHCASAEPFTVPTTALPGLPASKALCSP 2302
Query: 304 EEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
+ C + +C+ + CD + +C D SDE NC
Sbjct: 2303 SQLRCGSGECLPFEHRCDLQVNCQDGSDEDNC 2334
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 121 CDGSKFFCRNGKCISRMWSCDGDDDCGDNSDED 153
C GS+ C +G+C + CDG DC D SDE+
Sbjct: 2092 CPGSRHRCASGECAPKGGPCDGAVDCDDGSDEE 2124
>sp|Q9Y5Y6|ST14_HUMAN Suppressor of tumorigenicity 14 protein OS=Homo sapiens GN=ST14
PE=1 SV=2
Length = 855
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 21/124 (16%)
Query: 213 EFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSC-SPDQFSCGNGRC 271
+FTC + CI K+ CDG DC D +DE LNC SC + QF+C N C
Sbjct: 456 QFTCRTGR------CIRKELRCDGWADCTDHSDE----LNC----SCDAGHQFTCKNKFC 501
Query: 272 INTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSD 331
W+CD NDCGD SDE + C +C ++ F C N KC+ K+ C+G+DDCGD SD
Sbjct: 502 KPLFWVCDSVNDCGDNSDE-QGC-----SCPAQTFRCSNGKCLSKSQQCNGKDDCGDGSD 555
Query: 332 EFNC 335
E +C
Sbjct: 556 EASC 559
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 96/228 (42%), Gaps = 71/228 (31%)
Query: 115 VAKNITCDGS-----KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPG 169
+A+ ++ D S +F CR G+CI + CDG DC D+SD
Sbjct: 441 LAEYLSYDSSDPCPGQFTCRTGRCIRKELRCDGWADCTDHSD------------------ 482
Query: 170 ELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIP 229
EL N CD +FTC +NK C P
Sbjct: 483 EL---------------------------------NCSCDAGHQFTC-KNKF-----CKP 503
Query: 230 KKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
W+CD DC D +DE +CP Q+ F C NG+C++ C+ +DCGDGSD
Sbjct: 504 LFWVCDSVNDCGDNSDEQ--GCSCPAQT------FRCSNGKCLSKSQQCNGKDDCGDGSD 555
Query: 290 EGKECHDKYRTCSSEEFACQNFKCIRK-TYHCDGEDDCGDRSDEFNCN 336
E TC+ + C N C+ K CDG++DC D SDE +C+
Sbjct: 556 EASCPKVNVVTCTKHTYRCLNGLCLSKGNPECDGKEDCSDGSDEKDCD 603
>sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1
Length = 5255
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQIT-GVSQPPGELGVPGHVQITGVS 183
+F C +G+CI R C+G+ DCG D D C+ + G Q VP + G
Sbjct: 1444 EFRCASGRCIPRAHVCNGELDCGFADDSDEAGCSPSCSVGEFQCAAGRCVPYPHRCNG-- 1501
Query: 184 QPPGIVMVMTTVQTGLMNHPNNRKCD-EETEFTCTENKAWNRAQCIPKKWLCDGDPDCVD 242
+ + R C F C + AQC+P LCDG DC D
Sbjct: 1502 ------------HDDCGDFSDERGCVCPAGHFQCPD------AQCLPPAALCDGMQDCGD 1543
Query: 243 GADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK-ECHDKYR-- 299
G DE CP + +C+P Q C +G C++ LCD DC DG DE C +
Sbjct: 1544 GTDEAF----CPDRITCAPGQLPCPDGSCVSQVKLCDGIWDCRDGWDESSVRCMVSWAPP 1599
Query: 300 ----------------TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
C EF C++ +C+ + + CD E DC D SDE CN
Sbjct: 1600 APTQLPTVPANGTAAPVCGPYEFPCRSGQCVPRGWVCDSEADCPDNSDELGCN 1652
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 211 ETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270
++EF C +C+P WLCD + DC DG+DE AL+ C+P Q C +G+
Sbjct: 1365 DSEFPCRSG-----GRCVPGAWLCDNEDDCGDGSDE-VCALH------CAPHQHRCADGQ 1412
Query: 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCG--D 328
C+ G CD +DCGDGSDE C+ EF C + +CI + + C+GE DCG D
Sbjct: 1413 CVPWGARCDGLSDCGDGSDERGC---PPPPCAPPEFRCASGRCIPRAHVCNGELDCGFAD 1469
Query: 329 RSDEFNCN 336
SDE C+
Sbjct: 1470 DSDEAGCS 1477
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 121 CDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
C S+F CR+G +C+ W CD +DDCGD SDE + + P + H
Sbjct: 1363 CPDSEFPCRSGGRCVPGAWLCDNEDDCGDGSDE--------VCALHCAPHQ-----HRCA 1409
Query: 180 TGVSQPPGIVM-VMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDP 238
G P G ++ G EF C + CIP+ +C+G+
Sbjct: 1410 DGQCVPWGARCDGLSDCGDGSDERGCPPPPCAPPEFRCASGR------CIPRAHVCNGEL 1463
Query: 239 DCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKY 298
DC D + + SCS +F C GRC+ C+ +DCGD SDE +
Sbjct: 1464 DCGFADDSDEAGCS----PSCSVGEFQCAAGRCVPYPHRCNGHDDCGDFSDE------RG 1513
Query: 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
C + F C + +C+ CDG DCGD +DE C
Sbjct: 1514 CVCPAGHFQCPDAQCLPPAALCDGMQDCGDGTDEAFC 1550
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 84/221 (38%), Gaps = 41/221 (18%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV 177
ITC + C +G C+S++ CDG DC D DE C V PP +P V
Sbjct: 1553 RITCAPGQLPCPDGSCVSQVKLCDGIWDCRDGWDESSVRCMVSWA----PPAPTQLP-TV 1607
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
G + P C EF C QC+P+ W+CD +
Sbjct: 1608 PANGTAAP---------------------VCG-PYEFPC------RSGQCVPRGWVCDSE 1639
Query: 238 PDCVDGADENTTALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKE-CH 295
DC D +DE L C SC F C G CI+ LCD C D SDE + C
Sbjct: 1640 ADCPDNSDE----LGC--NRSCVLGHFPCALGAHCIHYDHLCDGIPHCPDHSDESDDNCG 1693
Query: 296 DKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336
F C N C+ T CDG DC DE C
Sbjct: 1694 STQIPPCPGHFVCNNRVCVNATRVCDGALDCPQGEDELACE 1734
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 88/232 (37%), Gaps = 42/232 (18%)
Query: 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQI 179
+C +F C G+C+ C+G DDCGD SDE C GH Q
Sbjct: 1479 SCSVGEFQCAAGRCVPYPHRCNGHDDCGDFSDERGCVCPA---------------GHFQC 1523
Query: 180 TGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENK-AWNRAQCIPKKWLCDGDP 238
P + G + + C + TC + C+ + LCDG
Sbjct: 1524 PDAQCLPPAALCDGMQDCG--DGTDEAFCPD--RITCAPGQLPCPDGSCVSQVKLCDGIW 1579
Query: 239 DCVDGADEN-----------------TTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHD 281
DC DG DE+ T N C P +F C +G+C+ GW+CD +
Sbjct: 1580 DCRDGWDESSVRCMVSWAPPAPTQLPTVPANGTAAPVCGPYEFPCRSGQCVPRGWVCDSE 1639
Query: 282 NDCGDGSDEGKECHDKYRTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDE 332
DC D SDE R+C F C CI + CDG C D SDE
Sbjct: 1640 ADCPDNSDE----LGCNRSCVLGHFPCALGAHCIHYDHLCDGIPHCPDHSDE 1687
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 226 QCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSC-GNGRCINTGWLCDHDNDC 284
QC+P C P C D +F C GRC+ WLCD+++DC
Sbjct: 1349 QCVPTAEPCPAQPHCPD-------------------SEFPCRSGGRCVPGAWLCDNEDDC 1389
Query: 285 GDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
GDGSDE H C+ + C + +C+ CDG DCGD SDE
Sbjct: 1390 GDGSDEVCALH-----CAPHQHRCADGQCVPWGARCDGLSDCGDGSDE 1432
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 18/122 (14%)
Query: 182 VSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCV 241
V PP + M T V T P + + + + C+ +CDG DC+
Sbjct: 2454 VMGPPALPMPPTGVPT-----PTSAEPPLPRLLCPPDQFLCDALGCVDAAMVCDGQQDCL 2508
Query: 242 DGADENTTALNCPKQSSCSP-------------DQFSCGNGRCINTGWLCDHDNDCGDGS 288
DG+DE SS SP QFSCG G C+ CD DC DGS
Sbjct: 2509 DGSDEAHCGALPTSGSSPSPLAWPSSPPPTCSPKQFSCGTGECLALEKRCDLSRDCADGS 2568
Query: 289 DE 290
DE
Sbjct: 2569 DE 2570
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 262 DQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS----------------EE 305
DQF C C++ +CD DC DGSDE C + SS ++
Sbjct: 2485 DQFLCDALGCVDAAMVCDGQQDCLDGSDE-AHCGALPTSGSSPSPLAWPSSPPPTCSPKQ 2543
Query: 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
F+C +C+ CD DC D SDE +C
Sbjct: 2544 FSCGTGECLALEKRCDLSRDCADGSDESSC 2573
>sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1
Length = 5147
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 101/252 (40%), Gaps = 66/252 (26%)
Query: 122 DGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITG 181
+G NG C+ W CD DDCGD SDE+ G + P G G Q+T
Sbjct: 1378 EGEALCQENGHCVPHGWLCDNQDDCGDGSDEE---------GCAAP----GC-GEGQMTC 1423
Query: 182 VSQPPGIVMVMTTVQTGLMNHPNNRKCD-----EETEFTCTENK-AWNRAQCIPKKWLCD 235
S G + + + +R+ D +E + C + A +C+P LCD
Sbjct: 1424 SS---GHCLPLALL--------CDRQDDCGDGTDEPSYPCPQGLLACADGRCLPPALLCD 1472
Query: 236 GDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGK--- 292
G PDC+D ADE + C Q +C P + SC +G C+ LCD DC DG+DEG
Sbjct: 1473 GHPDCLDAADEES----CLGQVTCVPGEVSCVDGTCLGAIQLCDGVWDCPDGADEGPGHC 1528
Query: 293 ----------------------------ECHDKYRTCSSEEFACQNFKCIRKTYHCDGED 324
C EF C + +C + + CD E+
Sbjct: 1529 PLPSLPTPPASTLPGPSPGSLDTASSPLASASPAPPCGPFEFRCGSGECTPRGWRCDQEE 1588
Query: 325 DCGDRSDEFNCN 336
DC D SDE C
Sbjct: 1589 DCADGSDERGCG 1600
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 86/219 (39%), Gaps = 36/219 (16%)
Query: 118 NITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHV 177
+TC + C +G C+ + CDG DC D +DE P +C + L P
Sbjct: 1489 QVTCVPGEVSCVDGTCLGAIQLCDGVWDCPDGADEGPGHCPLP---------SLPTPPAS 1539
Query: 178 QITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGD 237
+ G S PG + T + L + C EF C +C P+ W CD +
Sbjct: 1540 TLPGPS--PG---SLDTASSPLASASPAPPCG-PFEFRC------GSGECTPRGWRCDQE 1587
Query: 238 PDCVDGADENTTALNCPKQSSCSPDQFSCGNG-RCINTGWLCDHDNDCGDGSDEGKECHD 296
DC DG+DE C+P C G C++ LCD C DGSDEG +
Sbjct: 1588 EDCADGSDERGCG------GPCAPHHAPCARGPHCVSPEQLCDGVRQCPDGSDEGPDACG 1641
Query: 297 KYRTCSS--------EEFACQNFKCIRKTYHCDGEDDCG 327
E+ C N CI CDG+ DCG
Sbjct: 1642 GLPALGGPNRTGLPCPEYTCPNGTCIGFQLVCDGQPDCG 1680
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 104/286 (36%), Gaps = 79/286 (27%)
Query: 97 AECKCDESTKLVNEGRMCVAKNITCDGS-------------KFFCRNGKCISRMWSCDGD 143
E C E+ V G +C ++ DGS + C +G C+ CD
Sbjct: 1379 GEALCQENGHCVPHGWLCDNQDDCGDGSDEEGCAAPGCGEGQMTCSSGHCLPLALLCDRQ 1438
Query: 144 DDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHP 203
DDCGD +DE C + + G PP ++ HP
Sbjct: 1439 DDCGDGTDEPSYPCPQGLLACAD--------------GRCLPPALL---------CDGHP 1475
Query: 204 NNR-KCDEET---EFTCTENK-AWNRAQCIPKKWLCDGDPDCVDGADEN-----TTALNC 253
+ DEE+ + TC + + C+ LCDG DC DGADE +L
Sbjct: 1476 DCLDAADEESCLGQVTCVPGEVSCVDGTCLGAIQLCDGVWDCPDGADEGPGHCPLPSLPT 1535
Query: 254 PKQSS------------------------CSPDQFSCGNGRCINTGWLCDHDNDCGDGSD 289
P S+ C P +F CG+G C GW CD + DC DGSD
Sbjct: 1536 PPASTLPGPSPGSLDTASSPLASASPAPPCGPFEFRCGSGECTPRGWRCDQEEDCADGSD 1595
Query: 290 E---GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332
E G C + C+ + C+ CDG C D SDE
Sbjct: 1596 ERGCGGPCAPHHAPCA------RGPHCVSPEQLCDGVRQCPDGSDE 1635
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 29/93 (31%)
Query: 227 CIPKKWLCDGDPDCVDGADENTTALNC-----------------------------PKQS 257
C+ + +CDG DC+DG+DE A N ++
Sbjct: 2403 CVEQAQVCDGREDCLDGSDERHCARNLLMWLPSLPALWAASTVPFMMPTMALPGLPASRA 2462
Query: 258 SCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDE 290
CSP Q SCG+G C++ CD DC DGSDE
Sbjct: 2463 LCSPSQLSCGSGECLSAERRCDLRPDCQDGSDE 2495
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQ 178
+ C + C C+ + CDG +DC D SDE +C + + +P
Sbjct: 2389 VQCGPGQTPCEVLGCVEQAQVCDGREDCLDGSDE--RHCARNLL--------MWLPSLPA 2438
Query: 179 ITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDP 238
+ S P M+ T GL P +R ++ +C +C+ + CD P
Sbjct: 2439 LWAASTVP--FMMPTMALPGL---PASRALCSPSQLSC------GSGECLSAERRCDLRP 2487
Query: 239 DCVDGADEN 247
DC DG+DE+
Sbjct: 2488 DCQDGSDED 2496
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 125/399 (31%), Gaps = 110/399 (27%)
Query: 5 TGASMVLISATIYPFAITVHRNYIYWTDLQ--LRGVYRAEKHTGANM------IEMVKRL 56
TG+S S+ F++ N ++W D + L G+ K N + R+
Sbjct: 2142 TGSSNAYASS----FSLQFSSNGLHWHDYRDLLPGILPLPKLFPRNWDDLDPAVWTFGRM 2197
Query: 57 EDSPRDIHVYSADSQKCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116
+ R + V+ D V P + GC P P
Sbjct: 2198 VQA-RFVRVWPHDVHHSDV-PLQVELLGCEPGSPPAP----------------------- 2232
Query: 117 KNITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITG-----------VS 165
C G C +G+C+ R CDG DC D SDE+ + TG S
Sbjct: 2233 ---LCPGVGLRCASGECVLRGGPCDGVLDCEDGSDEEGCVLLPEGTGRFHSTAKTLALSS 2289
Query: 166 QPPGELGVPGHVQITGVSQ----PPGIVMVMTTVQT---------GLMNHPNNRKCDEET 212
PG+L H G+++ PPG + +T G+ +H E
Sbjct: 2290 AQPGQL---LHWPREGLAETEHWPPGQESPTSPTETRPVSPGPASGVPHH------GESV 2340
Query: 213 EFTCTENKAWNRAQCIPKKW----LCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN 268
+ T A+ +P + P + A C P Q C
Sbjct: 2341 QMVTTTPIPQMEARTLPPGMAAVTVVPPHPVTPATPAGQSVAPGPFPPVQCGPGQTPCEV 2400
Query: 269 GRCINTGWLCDHDNDCGDGSDEGKECHDKY------------------------------ 298
C+ +CD DC DGSDE + C
Sbjct: 2401 LGCVEQAQVCDGREDCLDGSDE-RHCARNLLMWLPSLPALWAASTVPFMMPTMALPGLPA 2459
Query: 299 --RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335
CS + +C + +C+ CD DC D SDE C
Sbjct: 2460 SRALCSPSQLSCGSGECLSAERRCDLRPDCQDGSDEDGC 2498
>sp|P56677|ST14_MOUSE Suppressor of tumorigenicity 14 protein homolog OS=Mus musculus
GN=St14 PE=1 SV=2
Length = 855
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 83/212 (39%), Gaps = 66/212 (31%)
Query: 126 FFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQP 185
F C+ G+CI + CDG DC D SDE YC
Sbjct: 457 FMCKTGRCIRKELRCDGWADCPDYSDE--RYC---------------------------- 486
Query: 186 PGIVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGAD 245
+C+ +FTC C P W+CD DC DG+D
Sbjct: 487 ---------------------RCNATHQFTCKNQF------CKPLFWVCDSVNDCGDGSD 519
Query: 246 ENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEE 305
E + SC F C NG+C+ C+ ++CGDGSDE +C+
Sbjct: 520 E--------EGCSCPAGSFKCSNGKCLPQSQKCNGKDNCGDGSDEASCDSVNVVSCTKYT 571
Query: 306 FACQNFKCIRK-TYHCDGEDDCGDRSDEFNCN 336
+ CQN C+ K CDG+ DC D SDE NC+
Sbjct: 572 YRCQNGLCLSKGNPECDGKTDCSDGSDEKNCD 603
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 69/196 (35%), Gaps = 79/196 (40%)
Query: 114 CVAKNITCDG------------------SKFFCRNGKCISRMWSCDGDDDCGDNSDEDPN 155
C+ K + CDG +F C+N C W CD +DCGD SDE+
Sbjct: 464 CIRKELRCDGWADCPDYSDERYCRCNATHQFTCKNQFCKPLFWVCDSVNDCGDGSDEE-- 521
Query: 156 YCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPNNRKCDEETEFT 215
G S P G F
Sbjct: 522 -------GCSCPAG-------------------------------------------SFK 531
Query: 216 CTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTG 275
C+ K C+P+ C+G +C DG+DE + + SC+ + C NG C++ G
Sbjct: 532 CSNGK------CLPQSQKCNGKDNCGDGSDE--ASCDSVNVVSCTKYTYRCQNGLCLSKG 583
Query: 276 -WLCDHDNDCGDGSDE 290
CD DC DGSDE
Sbjct: 584 NPECDGKTDCSDGSDE 599
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 218 ENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQS-SCSPDQFSCGNGRCINTGW 276
+ KA +C+ ++CDG+PDC D +DE NCP S +C P++F C N +C+ W
Sbjct: 152 DEKACGNNECVKNDYVCDGEPDCRDRSDE----ANCPAISRTCEPNEFKCNNNKCVQKMW 207
Query: 277 LCDHDNDCGDGSDEGKECHDKYRT--CSSEEFACQNFK-CIRKTYHCDGEDDCGDRSDEF 333
LCD D+DCGD SDE C+ K + C EF C + + C+ ++HCDG +DC D SDE
Sbjct: 208 LCDGDDDCGDNSDE-LNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEV 266
Query: 334 NC 335
C
Sbjct: 267 GC 268
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 259 CSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTY 318
C D+ +CGN C+ ++CD + DC D SDE C RTC EF C N KC++K +
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDCRDRSDEAN-CPAISRTCEPNEFKCNNNKCVQKMW 207
Query: 319 HCDGEDDCGDRSDEFNCN 336
CDG+DDCGD SDE NCN
Sbjct: 208 LCDGDDDCGDNSDELNCN 225
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 87/227 (38%), Gaps = 67/227 (29%)
Query: 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNI----TCDGSKFF 127
+ ++NP + + G T E + + +V+ G V+ + C +
Sbjct: 98 RLTINPVQLSDAGTYICVSDYNGNTVEARA--TLSVVSYGPQEVSNGLRQAGQCMADEKA 155
Query: 128 CRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPG 187
C N +C+ + CDG+ DC D SDE
Sbjct: 156 CGNNECVKNDYVCDGEPDCRDRSDE----------------------------------- 180
Query: 188 IVMVMTTVQTGLMNHPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADEN 247
N P + E EF C NK C+ K WLCDGD DC D +DE
Sbjct: 181 ------------ANCPAISRTCEPNEFKCNNNK------CVQKMWLCDGDDDCGDNSDE- 221
Query: 248 TTALNC---PKQSSCSPDQFSCGNGR-CINTGWLCDHDNDCGDGSDE 290
LNC P S C P +F C + R C+ + + CD NDC DGSDE
Sbjct: 222 ---LNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDE 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,508,825
Number of Sequences: 539616
Number of extensions: 6807033
Number of successful extensions: 20196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 15520
Number of HSP's gapped (non-prelim): 2519
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)