Query psy954
Match_columns 337
No_of_seqs 259 out of 2055
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 22:12:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n7d_A LDL receptor, low-densi 100.0 5.3E-39 1.8E-43 332.3 14.2 197 120-336 5-211 (699)
2 1n7d_A LDL receptor, low-densi 100.0 6.3E-37 2.1E-41 316.8 18.7 199 114-336 42-250 (699)
3 3m0c_C LDL receptor, low-densi 100.0 3.4E-39 1.2E-43 336.7 0.0 198 119-336 22-229 (791)
4 3m0c_C LDL receptor, low-densi 100.0 2.4E-36 8.3E-41 315.2 0.0 196 119-336 63-268 (791)
5 3sov_A LRP-6, low-density lipo 99.9 4.9E-23 1.7E-27 193.7 11.5 116 1-117 193-310 (318)
6 3v64_C Agrin; beta propeller, 99.9 1.2E-22 4E-27 193.2 10.9 114 1-117 230-344 (349)
7 2fyj_A Low-density lipoprotein 99.9 2.2E-22 7.5E-27 151.5 8.7 79 257-337 3-82 (82)
8 3v65_B Low-density lipoprotein 99.9 4.9E-22 1.7E-26 191.5 13.2 112 1-115 273-385 (386)
9 1ijq_A LDL receptor, low-densi 99.9 7E-22 2.4E-26 185.1 11.3 115 1-116 191-316 (316)
10 3p5b_L Low density lipoprotein 99.9 7.3E-22 2.5E-26 191.3 10.6 116 1-117 273-399 (400)
11 2fcw_B LDL receptor, low-densi 99.8 2.9E-22 9.9E-27 149.9 3.0 76 258-336 2-79 (80)
12 4a0p_A LRP6, LRP-6, low-densit 99.8 1.8E-21 6.1E-26 198.8 8.2 115 1-116 504-620 (628)
13 3s94_A LRP-6, low-density lipo 99.8 1.9E-21 6.3E-26 198.4 8.2 112 1-116 506-618 (619)
14 4a0p_A LRP6, LRP-6, low-densit 99.8 4.3E-21 1.5E-25 196.0 10.0 114 1-116 193-306 (628)
15 2fyj_A Low-density lipoprotein 99.8 8.2E-21 2.8E-25 142.9 7.8 78 206-295 3-81 (82)
16 3s94_A LRP-6, low-density lipo 99.8 6.8E-21 2.3E-25 194.2 7.4 115 1-116 198-314 (619)
17 2fcw_B LDL receptor, low-densi 99.8 7.7E-21 2.6E-25 142.2 1.9 72 207-290 2-73 (80)
18 2xrc_A Human complement factor 99.5 3.3E-15 1.1E-19 150.7 4.6 95 226-336 182-276 (565)
19 2xrc_A Human complement factor 99.4 8.4E-14 2.9E-18 140.4 5.9 103 125-296 175-277 (565)
20 1d2l_A Lipoprotein receptor re 99.3 5.7E-13 1.9E-17 88.0 3.9 40 119-158 4-43 (45)
21 1ajj_A LR5, low-density lipopr 99.3 2.2E-12 7.6E-17 81.7 2.9 35 120-154 1-35 (37)
22 1ajj_A LR5, low-density lipopr 99.2 3.8E-12 1.3E-16 80.6 3.4 37 300-336 1-37 (37)
23 1cr8_A Protein (LOW density li 99.2 6.5E-12 2.2E-16 81.8 4.2 36 119-154 2-38 (42)
24 1j8e_A Low-density lipoprotein 99.2 1.4E-12 4.7E-17 85.9 0.9 38 120-157 4-41 (44)
25 2gtl_O Extracellular hemoglobi 99.2 1.1E-13 3.6E-18 121.1 -6.3 111 194-335 42-171 (215)
26 2m0p_A Low-density lipoprotein 99.2 1.8E-12 6.3E-17 87.7 0.6 36 119-154 5-40 (52)
27 3a7q_B Low-density lipoprotein 99.2 6.3E-12 2.1E-16 82.7 3.0 36 119-154 6-41 (44)
28 2jm4_A Relaxin receptor 1; LDL 99.2 8E-12 2.8E-16 81.8 3.5 36 119-154 5-41 (43)
29 2kny_A LRP-1, linker, APO-E; l 99.2 3E-12 1E-16 95.3 1.1 69 202-278 3-74 (80)
30 3dpr_E LDL-receptor class A 3; 99.2 1.3E-11 4.4E-16 79.0 3.8 34 121-154 1-36 (39)
31 2kny_A LRP-1, linker, APO-E; l 99.2 2.9E-12 9.8E-17 95.4 0.7 69 251-322 2-76 (80)
32 3a7q_B Low-density lipoprotein 99.2 1.4E-11 4.8E-16 81.0 3.7 38 299-336 6-43 (44)
33 2jm4_A Relaxin receptor 1; LDL 99.2 1.8E-11 6.1E-16 80.1 4.1 38 299-336 5-43 (43)
34 1cr8_A Protein (LOW density li 99.2 2.6E-11 8.8E-16 78.9 4.4 38 299-336 2-40 (42)
35 1k7b_A Subgroup A ROUS sarcoma 99.2 9.5E-12 3.3E-16 83.1 2.4 36 119-154 5-45 (47)
36 2m0p_A Low-density lipoprotein 99.1 1.2E-11 4.1E-16 83.7 2.2 40 298-337 4-43 (52)
37 1d2l_A Lipoprotein receptor re 99.1 2.9E-11 9.8E-16 79.8 3.9 38 299-336 4-41 (45)
38 3dpr_E LDL-receptor class A 3; 99.1 2.4E-11 8.2E-16 77.8 3.3 36 301-336 1-38 (39)
39 1k7b_A Subgroup A ROUS sarcoma 99.1 2.6E-11 8.8E-16 81.0 2.6 38 299-336 5-47 (47)
40 2gtl_O Extracellular hemoglobi 99.1 3.8E-12 1.3E-16 111.3 -2.2 62 237-308 40-103 (215)
41 2knx_A Prolow-density lipoprot 99.1 2.8E-11 9.6E-16 81.6 2.5 36 119-154 5-41 (50)
42 2i1p_A Low-density lipoprotein 99.1 1.7E-11 5.9E-16 82.1 1.3 35 120-154 6-41 (48)
43 1jrf_A TVA LDL-A module, subgr 99.1 5.7E-11 1.9E-15 79.3 3.1 36 119-154 3-43 (47)
44 2i1p_A Low-density lipoprotein 99.0 4.1E-11 1.4E-15 80.3 1.4 38 299-336 5-43 (48)
45 1j8e_A Low-density lipoprotein 99.0 6.7E-11 2.3E-15 77.8 1.6 37 299-335 3-39 (44)
46 2knx_A Prolow-density lipoprot 99.0 1.1E-10 3.9E-15 78.7 2.6 37 299-335 5-42 (50)
47 1jrf_A TVA LDL-A module, subgr 99.0 4.7E-11 1.6E-15 79.7 0.1 38 299-336 3-45 (47)
48 1kli_L Factor VIIA; extrinsic 98.7 3.1E-09 1.1E-13 76.7 1.4 50 75-130 5-54 (69)
49 2gtl_N Extracellular hemoglobi 98.7 8.5E-09 2.9E-13 89.5 3.6 44 119-162 51-97 (220)
50 2bz6_L Blood coagulation facto 98.6 6.3E-09 2.2E-13 71.1 1.1 46 78-129 2-47 (53)
51 2gtl_N Extracellular hemoglobi 98.6 2.1E-08 7.1E-13 87.1 4.3 58 257-316 51-114 (220)
52 2gtl_M Hemoglobin linker chain 98.6 9.6E-09 3.3E-13 89.8 1.8 42 119-160 52-95 (217)
53 2wph_E Coagulation factor IXA 98.6 1.3E-08 4.3E-13 71.2 1.8 40 78-117 2-41 (59)
54 1kig_L Factor XA; glycoprotein 98.5 2.1E-08 7.3E-13 67.9 1.8 45 78-129 1-45 (51)
55 2gtl_M Hemoglobin linker chain 98.5 5E-08 1.7E-12 85.3 3.2 64 257-333 52-119 (217)
56 2jkh_L Factor X light chain; p 98.3 1.7E-07 5.9E-12 64.4 1.1 41 76-117 2-42 (55)
57 3ojy_B Complement component C8 98.2 1.3E-06 4.6E-11 87.1 5.8 33 120-154 67-100 (537)
58 3ojy_A Complement component C8 98.1 1.5E-06 5E-11 87.0 4.8 64 226-296 31-102 (554)
59 3ojy_B Complement component C8 98.1 1.8E-06 6.1E-11 86.2 4.8 77 226-315 33-115 (537)
60 3ojy_A Complement component C8 98.1 3.2E-06 1.1E-10 84.5 5.6 37 120-159 65-102 (554)
61 1npe_A Nidogen, entactin; glyc 98.0 1.3E-05 4.5E-10 71.6 7.5 68 2-69 195-262 (267)
62 3sov_A LRP-6, low-density lipo 97.8 4.2E-05 1.4E-09 71.1 8.0 65 2-67 151-218 (318)
63 3p5b_L Low density lipoprotein 97.8 4.7E-05 1.6E-09 73.0 8.4 66 1-67 186-255 (400)
64 3v65_B Low-density lipoprotein 97.8 5E-05 1.7E-09 72.3 8.5 65 1-66 186-254 (386)
65 3v64_C Agrin; beta propeller, 97.8 3.4E-05 1.1E-09 72.5 6.7 64 2-66 144-211 (349)
66 1ijq_A LDL receptor, low-densi 97.5 0.0002 6.8E-09 66.1 8.2 64 2-66 105-172 (316)
67 1aut_L Activated protein C; se 97.4 5.6E-05 1.9E-09 59.6 2.2 55 76-137 55-110 (114)
68 1apq_A Complement protease C1R 97.3 7.9E-05 2.7E-09 50.1 1.9 34 82-116 19-52 (53)
69 3f1s_B Vitamin K-dependent pro 97.3 0.00014 4.9E-09 66.3 3.8 41 76-117 3-44 (283)
70 3t5o_A Complement component C6 97.2 0.00018 6.2E-09 76.2 4.5 33 304-336 121-153 (913)
71 3t5o_A Complement component C6 97.1 0.0003 1E-08 74.5 5.0 40 262-302 121-160 (913)
72 1npe_A Nidogen, entactin; glyc 96.6 0.0055 1.9E-07 54.2 7.9 64 2-66 107-175 (267)
73 2w2n_E LDL receptor, low-densi 96.5 0.00082 2.8E-08 52.3 1.9 43 72-116 26-68 (107)
74 2c4f_L Coagulation factor VII 96.3 0.0018 6.2E-08 52.8 2.8 40 78-117 91-130 (142)
75 1x7a_L Coagulation factor IX, 96.0 0.0035 1.2E-07 51.4 3.1 41 76-117 86-127 (146)
76 2vh0_B Activated factor XA lig 95.5 0.0033 1.1E-07 50.7 0.9 41 76-117 82-122 (134)
77 1szb_A Mannose binding lectin- 95.3 0.0054 1.8E-07 51.3 1.6 40 76-116 125-167 (170)
78 1nfu_B Coagulation factor XA, 95.3 0.0042 1.5E-07 53.5 0.9 49 76-131 82-130 (195)
79 1lmj_A Fibrillin 1; EGF, calci 95.2 0.0043 1.5E-07 45.9 0.5 58 76-135 4-63 (86)
80 1emn_A Fibrillin; extracellula 95.0 0.017 5.9E-07 42.2 3.5 44 88-136 18-61 (82)
81 1lmj_A Fibrillin 1; EGF, calci 94.5 0.0068 2.3E-07 44.8 0.0 39 76-115 47-86 (86)
82 1z6c_A Vitamin K-dependent pro 94.3 0.024 8.1E-07 41.9 2.7 40 76-116 4-44 (87)
83 3s25_A Hypothetical 7-bladed b 94.2 0.065 2.2E-06 49.1 6.1 49 1-52 134-182 (302)
84 2w86_A Fibrillin-1, fibrillin1 93.8 0.012 4.1E-07 47.9 0.2 39 76-115 108-147 (147)
85 1nzi_A Complement C1S componen 93.6 0.023 7.9E-07 46.6 1.7 40 76-116 118-158 (159)
86 3s25_A Hypothetical 7-bladed b 93.5 0.11 3.7E-06 47.6 6.1 52 1-55 93-147 (302)
87 1uzk_A Fibrillin-1; glycoprote 93.1 0.018 6.1E-07 47.7 0.2 39 76-115 123-162 (162)
88 2w2n_E LDL receptor, low-densi 93.0 0.017 5.9E-07 44.6 0.0 37 76-114 70-106 (107)
89 3tc9_A Hypothetical hydrolase; 89.8 0.4 1.4E-05 45.8 5.8 52 14-65 224-277 (430)
90 3u7u_G Neuregulin 1; signaling 89.7 0.2 6.7E-06 33.8 2.5 37 72-115 10-48 (55)
91 3h5c_B Vitamin K-dependent pro 88.6 0.29 9.8E-06 44.7 3.6 41 76-117 44-85 (317)
92 1yo8_A Thrombospondin-2; EGF, 88.1 0.38 1.3E-05 48.6 4.4 60 76-137 45-122 (634)
93 1z6c_A Vitamin K-dependent pro 88.1 0.33 1.1E-05 35.5 3.0 38 76-116 46-85 (87)
94 1edm_B Factor IX; epidermal gr 87.2 0.22 7.5E-06 30.5 1.3 28 73-106 6-33 (39)
95 3tc9_A Hypothetical hydrolase; 87.0 1.8 6.1E-05 41.2 8.3 63 2-65 165-233 (430)
96 2bou_A EGF-like module contain 86.9 0.22 7.7E-06 39.9 1.6 30 87-117 110-139 (143)
97 1dx5_I Thrombomodulin; serine 86.3 0.23 8E-06 38.7 1.3 30 84-114 88-118 (118)
98 3hrp_A Uncharacterized protein 86.2 1.4 4.6E-05 41.7 7.0 33 15-47 322-356 (409)
99 1emn_A Fibrillin; extracellula 85.5 0.41 1.4E-05 34.6 2.3 25 88-114 57-81 (82)
100 1rwi_B Serine/threonine-protei 85.5 0.91 3.1E-05 39.0 5.0 33 13-45 189-222 (270)
101 2kl7_A Fibulin-4; secreted, ca 84.7 0.55 1.9E-05 33.2 2.6 38 76-114 4-44 (71)
102 1uzk_A Fibrillin-1; glycoprote 84.2 0.33 1.1E-05 39.8 1.4 30 87-117 15-44 (162)
103 2k2s_B Micronemal protein 6; m 84.1 0.24 8.2E-06 34.1 0.4 31 71-107 12-44 (61)
104 1a3p_A Epidermal growth factor 84.1 0.61 2.1E-05 29.6 2.4 31 76-115 9-40 (45)
105 1x7a_L Coagulation factor IX, 83.7 0.83 2.9E-05 36.9 3.6 35 72-116 50-84 (146)
106 1z1y_A Ookinete surface protei 82.1 0.28 9.5E-06 41.2 0.1 59 72-135 93-155 (186)
107 4hw6_A Hypothetical protein, I 82.0 1.7 5.7E-05 41.5 5.6 49 14-65 137-189 (433)
108 3hrp_A Uncharacterized protein 81.9 3.2 0.00011 39.0 7.5 29 16-44 266-297 (409)
109 1egf_A Epidermal growth factor 81.3 0.96 3.3E-05 29.8 2.5 31 76-116 12-44 (53)
110 3e5z_A Putative gluconolactona 81.1 3.6 0.00012 35.9 7.2 43 4-46 16-60 (296)
111 2iwa_A Glutamine cyclotransfer 81.1 4.3 0.00015 36.2 7.6 37 16-52 66-102 (266)
112 1rwi_B Serine/threonine-protei 80.2 1.9 6.5E-05 36.9 4.9 31 13-43 105-136 (270)
113 4hw6_A Hypothetical protein, I 79.7 1.9 6.6E-05 41.1 5.1 35 14-48 226-262 (433)
114 1z1y_A Ookinete surface protei 79.6 0.62 2.1E-05 39.0 1.4 55 74-137 9-66 (186)
115 2bou_A EGF-like module contain 79.3 0.44 1.5E-05 38.1 0.4 34 76-110 45-81 (143)
116 3h5c_B Vitamin K-dependent pro 79.2 2.5 8.6E-05 38.2 5.6 53 72-135 7-60 (317)
117 3fvz_A Peptidyl-glycine alpha- 79.0 2.5 8.7E-05 37.9 5.5 37 15-52 142-181 (329)
118 3dr2_A Exported gluconolactona 77.8 7 0.00024 34.5 8.0 42 5-47 34-77 (305)
119 2fp8_A Strictosidine synthase; 77.7 3.8 0.00013 36.6 6.2 37 9-45 178-216 (322)
120 2qc5_A Streptogramin B lactona 77.6 5.4 0.00018 34.3 7.1 33 14-47 228-261 (300)
121 1nfu_B Coagulation factor XA, 77.4 0.55 1.9E-05 40.1 0.4 52 72-134 44-96 (195)
122 2qc5_A Streptogramin B lactona 77.1 4.2 0.00014 35.0 6.2 34 14-48 186-220 (300)
123 3fvz_A Peptidyl-glycine alpha- 76.6 4.1 0.00014 36.5 6.2 38 15-52 195-234 (329)
124 2w86_A Fibrillin-1, fibrillin1 76.4 0.73 2.5E-05 37.0 0.9 37 73-116 7-43 (147)
125 2vj3_A Neurogenic locus notch 76.4 2.2 7.4E-05 33.7 3.7 41 88-135 20-61 (135)
126 1yo8_A Thrombospondin-2; EGF, 76.3 3.1 0.00011 41.9 5.6 59 76-136 103-176 (634)
127 2vh0_B Activated factor XA lig 75.5 0.67 2.3E-05 36.9 0.4 34 73-116 45-78 (134)
128 3nol_A Glutamine cyclotransfer 74.3 8.5 0.00029 34.2 7.4 38 16-53 85-124 (262)
129 2z2n_A Virginiamycin B lyase; 74.2 5.8 0.0002 34.0 6.3 35 14-49 139-174 (299)
130 4d90_A EGF-like repeat and dis 73.9 3.1 0.00011 32.8 4.1 35 73-116 3-38 (143)
131 2z2n_A Virginiamycin B lyase; 73.5 5.9 0.0002 34.0 6.2 34 14-48 181-215 (299)
132 3das_A Putative oxidoreductase 73.3 4.9 0.00017 37.3 5.8 42 7-48 23-65 (347)
133 3dsm_A Uncharacterized protein 73.1 10 0.00035 33.9 7.9 40 13-52 81-121 (328)
134 1dx5_I Thrombomodulin; serine 72.0 1.2 4.3E-05 34.4 1.2 31 76-109 5-36 (118)
135 1nql_B Epidermal growth factor 71.9 1 3.5E-05 29.8 0.6 32 75-115 11-43 (53)
136 3kya_A Putative phosphatase; s 71.9 5.2 0.00018 39.1 5.8 31 14-44 245-277 (496)
137 1hae_A Heregulin-alpha; growth 70.9 1.8 6.1E-05 29.5 1.7 37 73-115 9-46 (63)
138 3sre_A PON1, serum paraoxonase 70.2 6 0.0002 36.8 5.7 63 2-66 207-274 (355)
139 2wg3_C Hedgehog-interacting pr 69.9 2.3 8E-05 41.1 2.9 96 18-140 338-442 (463)
140 3dr2_A Exported gluconolactona 69.7 12 0.00039 33.0 7.3 33 14-46 186-225 (305)
141 2p4o_A Hypothetical protein; p 68.8 10 0.00035 33.5 6.8 51 14-66 167-220 (306)
142 3dsm_A Uncharacterized protein 67.1 13 0.00045 33.2 7.2 47 17-65 132-179 (328)
143 3g4e_A Regucalcin; six bladed 66.9 8.4 0.00029 33.8 5.8 39 15-53 198-237 (297)
144 2qe8_A Uncharacterized protein 66.9 9.4 0.00032 34.4 6.2 39 14-52 65-109 (343)
145 2p4o_A Hypothetical protein; p 66.8 7.5 0.00026 34.4 5.4 30 16-45 32-62 (306)
146 1k36_A Epiregulin; EGF-like fo 66.4 2.1 7.1E-05 27.3 1.2 30 76-115 12-42 (46)
147 2vj3_A Neurogenic locus notch 65.6 5.6 0.00019 31.2 3.9 42 87-135 57-99 (135)
148 1tpg_A T-plasminogen activator 63.4 3 0.0001 30.6 1.7 35 72-115 50-85 (91)
149 3nok_A Glutaminyl cyclase; bet 62.6 11 0.00037 33.7 5.5 38 16-53 94-133 (268)
150 1q7f_A NHL, brain tumor CG1071 62.0 11 0.00037 32.4 5.4 33 14-47 162-195 (286)
151 3mbr_X Glutamine cyclotransfer 61.5 18 0.00062 31.7 6.7 37 16-52 63-101 (243)
152 1aut_L Activated protein C; se 61.3 6.5 0.00022 29.9 3.4 18 88-106 27-44 (114)
153 2ism_A Putative oxidoreductase 61.0 15 0.00053 33.5 6.6 35 7-42 22-57 (352)
154 3e5z_A Putative gluconolactona 60.1 24 0.00082 30.4 7.5 46 4-50 58-104 (296)
155 3ca7_A Protein spitz; argos, E 58.0 2 6.9E-05 28.0 -0.1 32 75-115 13-47 (52)
156 3a9g_A Putative uncharacterize 58.0 16 0.00056 33.4 6.2 39 7-47 20-59 (354)
157 2c4f_L Coagulation factor VII 57.7 3.3 0.00011 33.0 1.2 34 73-116 50-83 (142)
158 1cru_A Protein (soluble quinop 55.9 21 0.00073 34.0 6.8 45 5-49 16-61 (454)
159 1q7f_A NHL, brain tumor CG1071 55.8 18 0.00061 31.0 5.7 33 14-47 119-152 (286)
160 3dem_A Complement factor MAsp- 54.7 5.1 0.00018 35.4 2.0 32 83-115 132-163 (278)
161 2ism_A Putative oxidoreductase 54.4 18 0.00062 33.0 5.8 31 16-46 268-298 (352)
162 2dg1_A DRP35, lactonase; beta 54.0 25 0.00086 30.7 6.6 41 10-50 39-80 (333)
163 3g4e_A Regucalcin; six bladed 50.9 33 0.0011 29.8 6.8 40 9-48 5-47 (297)
164 2fp8_A Strictosidine synthase; 50.6 26 0.0009 30.9 6.1 49 15-65 125-192 (322)
165 2qe8_A Uncharacterized protein 49.4 14 0.00047 33.3 4.0 50 16-65 248-298 (343)
166 1nt0_A MAsp2, mannose-binding 47.0 5.7 0.00019 35.4 1.0 39 76-115 121-162 (286)
167 3nt1_A Prostaglandin-endoperox 43.2 7.7 0.00026 38.7 1.4 35 72-115 3-38 (587)
168 3kya_A Putative phosphatase; s 42.4 26 0.0009 34.0 5.0 30 15-44 443-474 (496)
169 3das_A Putative oxidoreductase 42.1 38 0.0013 31.2 5.8 50 16-65 263-315 (347)
170 3a9g_A Putative uncharacterize 41.8 20 0.0007 32.8 4.0 37 7-43 188-226 (354)
171 1q4g_A Prostaglandin G/H synth 40.8 9.6 0.00033 37.7 1.6 34 72-115 4-39 (553)
172 3ltf_D Protein spitz; receptor 40.6 3.9 0.00013 27.5 -0.9 30 77-115 15-47 (58)
173 1pjx_A Dfpase, DIISOPROPYLFLUO 40.0 38 0.0013 29.0 5.4 42 8-49 10-59 (314)
174 3vgz_A Uncharacterized protein 39.4 64 0.0022 27.9 6.9 37 16-52 89-127 (353)
175 2dg1_A DRP35, lactonase; beta 39.0 50 0.0017 28.7 6.1 35 10-44 176-212 (333)
176 1gl4_A Nidogen-1, entactin; im 38.1 4.5 0.00016 36.5 -1.1 39 76-117 6-46 (285)
177 2iwa_A Glutamine cyclotransfer 38.0 56 0.0019 28.8 6.1 38 16-53 152-189 (266)
178 1g1s_A P-selectin; selectin, l 36.1 10 0.00034 30.4 0.8 24 88-116 132-155 (162)
179 1pjx_A Dfpase, DIISOPROPYLFLUO 35.7 60 0.0021 27.7 6.0 37 16-52 226-263 (314)
180 2ghs_A AGR_C_1268P; regucalcin 33.8 66 0.0023 28.4 6.0 39 9-47 41-82 (326)
181 3u4y_A Uncharacterized protein 31.8 1.7E+02 0.0059 24.9 8.4 34 14-48 39-74 (331)
182 2p3f_N Anti-coagulant protein 31.8 19 0.00066 25.5 1.6 21 97-117 47-67 (78)
183 2g8s_A Glucose/sorbosone dehyd 30.9 64 0.0022 29.2 5.5 31 16-46 271-309 (353)
184 2g8s_A Glucose/sorbosone dehyd 29.9 39 0.0013 30.7 3.8 36 7-42 188-225 (353)
185 2mad_H Methylamine dehydrogena 29.3 1.2E+02 0.004 27.6 7.1 50 16-66 318-370 (373)
186 2ghs_A AGR_C_1268P; regucalcin 28.8 72 0.0025 28.1 5.4 32 13-44 176-209 (326)
187 1ob1_C Major merozoite surface 28.8 23 0.00077 26.6 1.6 31 76-106 47-83 (99)
188 3ssb_I IMPI alpha, inducible m 26.3 21 0.00071 20.9 0.8 19 98-117 6-24 (32)
189 1ccv_A AMCI, chymotrypsin inhi 26.2 20 0.00068 23.5 0.8 18 98-116 35-52 (56)
190 4d90_A EGF-like repeat and dis 26.1 24 0.00081 27.5 1.4 19 88-107 110-128 (143)
191 1ri6_A Putative isomerase YBHE 25.7 1.8E+02 0.0062 24.6 7.4 54 16-69 277-334 (343)
192 3vgz_A Uncharacterized protein 25.6 83 0.0029 27.1 5.1 37 16-52 272-310 (353)
193 3nol_A Glutamine cyclotransfer 25.6 90 0.0031 27.5 5.2 34 20-53 176-209 (262)
194 3u4y_A Uncharacterized protein 23.3 2.8E+02 0.0096 23.4 8.2 34 15-48 175-210 (331)
195 1cru_A Protein (soluble quinop 22.9 58 0.002 30.9 3.7 36 7-42 219-255 (454)
196 1pby_B Quinohemoprotein amine 22.7 2.3E+02 0.0078 23.8 7.4 36 17-52 35-72 (337)
197 1mda_H Methylamine dehydrogena 22.7 56 0.0019 30.2 3.4 48 16-65 314-364 (368)
198 3nok_A Glutaminyl cyclase; bet 20.9 1.6E+02 0.0053 26.1 5.8 37 17-53 182-218 (268)
199 1ata_A Ascaris trypsin inhibit 20.6 52 0.0018 22.1 2.0 29 83-117 27-57 (62)
No 1
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=5.3e-39 Score=332.29 Aligned_cols=197 Identities=38% Similarity=0.876 Sum_probs=136.2
Q ss_pred CCCCCccccCCCceeCCccccCCCCCCCCCCCCCCCccCCcccCCCCCCCCcccCC--CccccCCCCCCCCccceeeecC
Q psy954 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPG--HVQITGVSQPPGIVMVMTTVQT 197 (337)
Q Consensus 120 ~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~~c~c~~~~~~~~~~~--~~C~~~~~~~~~~C~~~~~C~~ 197 (337)
+|.+.+|+|.+|+||+..|+|||+.||+|+|||.+..|....|. ..+|.|.+ ++||+.++. |++..+|.+
T Consensus 5 ~C~~~~f~C~~g~ci~~~~~Cdg~~dC~d~sDE~~~~C~~~~C~----~~~f~C~~~~~~Ci~~~~~----Cdg~~dC~d 76 (699)
T 1n7d_A 5 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCK----SGDFSCGGRVNRCIPQFWR----CDGQVDCDN 76 (699)
T ss_dssp ---------------------------------------CCSCS----SSSCCCCC--CCCCCSSST----TSSSCCC-C
T ss_pred CCCccceeCCCCcEEcHHhcCCCcccCCCCCCCCccccCCcCCC----CCccCCCCCCCceeCccee----cCCcccCCC
Confidence 58899999999999999999999999999999988778766543 57899976 489987653 999999999
Q ss_pred CCCC-CCCCCCCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeCCceecCCC
Q psy954 198 GLMN-HPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGW 276 (337)
Q Consensus 198 ~~d~-~c~~~~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~g~Ci~~~~ 276 (337)
+.|| +|+..+|...+ |+|.++ +||+..|+|||+.||.||||| .+|.. ..|++.+|+|.+++||+..|
T Consensus 77 gsDE~~C~~~~C~~~~-f~C~~g------~Ci~~~~~Cdg~~dC~dgsDE----~~C~~-~~C~~~~f~C~~~~Ci~~~~ 144 (699)
T 1n7d_A 77 GSDEQGCPPKTCSQDE-FRCHDG------KCISRQFVCDSDRDCLDGSDE----ASCPV-LTCGPASFQCNSSTCIPQLW 144 (699)
T ss_dssp CCTTTSCSSCCCCSSC-CCSSCC----------CCCTTCSSCCSSSSCSS----SSCCC-CCCCSSCCCCSSSCCCCTTS
T ss_pred CcccCcccccccccCc-EEcCCC------CEecHHHcCCCcCcCCCCCcc----CCcCc-cccCccccCCCCCcccchhc
Confidence 9999 89888999887 999988 999999999999999999999 79986 78999999999999999999
Q ss_pred cCCCCCCCCCCCCCC-CCCCCC------CCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 277 LCDHDNDCGDGSDEG-KECHDK------YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 277 ~CDg~~dC~d~sDE~-~~C~~~------~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
+|||+.||.|+|||. .+|... ...|...+|+|.+|.||+.+|+|||+.||.|||||.+|.
T Consensus 145 ~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~ 211 (699)
T 1n7d_A 145 ACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 211 (699)
T ss_dssp TTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCSCSSSCCCSSSCCCSTTCTTSSSCCSTTSCSSCSCC
T ss_pred ccCCCCcCCCCcccccccCCCcccccCCCCCCCCcceecCCCceEechhccCCCCCCCCCcccccCC
Confidence 999999999999993 568632 347999999999999999999999999999999999985
No 2
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=6.3e-37 Score=316.77 Aligned_cols=199 Identities=37% Similarity=0.828 Sum_probs=171.5
Q ss_pred cccCCCCCCCCccccCC--CceeCCccccCCCCCCCCCCCCCCCccCCcccCCCCCCCCcccCCCccccCCCCCCCCccc
Q psy954 114 CVAKNITCDGSKFFCRN--GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMV 191 (337)
Q Consensus 114 C~~~~~~C~~~~f~C~~--g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~~c~c~~~~~~~~~~~~~C~~~~~~~~~~C~~ 191 (337)
|.. .+|.+.+|+|.+ ++|||..|+|||+.||.|||||.+ |....|. +.+|.|.+++||+.++ .|++
T Consensus 42 C~~--~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~--C~~~~C~----~~~f~C~~g~Ci~~~~----~Cdg 109 (699)
T 1n7d_A 42 CLS--VTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQG--CPPKTCS----QDEFRCHDGKCISRQF----VCDS 109 (699)
T ss_dssp --C--CSCSSSSCCCCC--CCCCCSSSTTSSSCCC-CCCTTTS--CSSCCCC----SSCCCSSCC----CCC----TTCS
T ss_pred cCC--cCCCCCccCCCCCCCceeCcceecCCcccCCCCcccCc--ccccccc----cCcEEcCCCCEecHHH----cCCC
Confidence 643 369999999997 489999999999999999999976 6655442 4789999999997765 3899
Q ss_pred eeeecCCCCC-CCCCCCCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCC-------CCCCCCCc
Q psy954 192 MTTVQTGLMN-HPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPK-------QSSCSPDQ 263 (337)
Q Consensus 192 ~~~C~~~~d~-~c~~~~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~-------~~~C~~~~ 263 (337)
..+|..+.|| +|...+|.+.+ |+|.++ +||+..|+|||+.||.|||||.+ .+|.. ...|...+
T Consensus 110 ~~dC~dgsDE~~C~~~~C~~~~-f~C~~~------~Ci~~~~~Cdg~~dC~dgsDE~~--~~C~~~~~~~~~~~~C~~~~ 180 (699)
T 1n7d_A 110 DRDCLDGSDEASCPVLTCGPAS-FQCNSS------TCIPQLWACDNDPDCEDGSDEWP--QRCRGLYVFQGDSSPCSAFE 180 (699)
T ss_dssp SCCSSSSCSSSSCCCCCCCSSC-CCCSSS------CCCCTTSTTCSSCCSSSSSSSSC--SSSSCCCCCSSCCCCSCSSS
T ss_pred cCcCCCCCccCCcCccccCccc-cCCCCC------cccchhcccCCCCcCCCCccccc--ccCCCcccccCCCCCCCCcc
Confidence 9999999999 99989999877 999887 99999999999999999999943 46853 24799999
Q ss_pred EEeeCCceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 264 FSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 264 f~C~~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
|+|.+|.||+..|+|||+.||.||||| .+|. ...|.+.+|+|.++.||+..|+|||+.||.|||||.+|.
T Consensus 181 f~C~~g~Ci~~~~~CDg~~dC~dgsDE-~~C~--~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~~C~ 250 (699)
T 1n7d_A 181 FHCLSGECIHSSWRCDGGPDCKDKSDE-ENCA--VATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCV 250 (699)
T ss_dssp CCCSSSCCCSTTCTTSSSCCSTTSCSS-CSCC--CCCCCSSEEESSSSCEEETTCCSSSCCCSSSSCSSSSTT
T ss_pred eecCCCceEechhccCCCCCCCCCccc-ccCC--CcccCCCcEecCCCceeeeecccCCCCCCCCCCccCCCC
Confidence 999999999999999999999999999 8997 457999999999999999999999999999999999884
No 3
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=336.69 Aligned_cols=198 Identities=37% Similarity=0.869 Sum_probs=0.0
Q ss_pred CCCCCCccccCCCceeCCccccCCCCCCCCCCCCCCCccCCcccCCCCCCCCcccCC--CccccCCCCCCCCccceeeec
Q psy954 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPG--HVQITGVSQPPGIVMVMTTVQ 196 (337)
Q Consensus 119 ~~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~~c~c~~~~~~~~~~~--~~C~~~~~~~~~~C~~~~~C~ 196 (337)
.+|.++||+|.+|+||+..|+|||++||.|||||.+..|....|. +.+|.|.+ ++||+.++. |++..+|.
T Consensus 22 ~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~D~sDE~~~~C~~~~C~----~~~f~C~~~~~~Ci~~~~~----CDg~~dC~ 93 (791)
T 3m0c_C 22 DRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCK----SGDFSCGGRVNRCIPQFWR----CDGQVDCD 93 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCcCccCCCCCCEEehhhcCCCCccCCCCCcccccccccCccC----cCccccCCCCCCEeecccc----CCCCcCcC
Confidence 369999999999999999999999999999999998777766653 57899987 899987663 99999999
Q ss_pred CCCCC-CCCCCCCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeCCceecCC
Q psy954 197 TGLMN-HPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTG 275 (337)
Q Consensus 197 ~~~d~-~c~~~~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~g~Ci~~~ 275 (337)
++.|| +|...+|...+ |+|.++ +||+..|+|||+.||.||||| .+|.. ..|+..+|+|.+++|||..
T Consensus 94 dgsDE~~C~~~~C~~~~-f~C~~g------~Ci~~~~~CDg~~dC~dgsDE----~~C~~-~~C~~~~f~C~~~~Ci~~~ 161 (791)
T 3m0c_C 94 NGSDEQGCPPKTCSQDE-FRCHDG------KCISRQFVCDSDRDCLDGSDE----ASCPV-LTCGPASFQCNSSTCIPQL 161 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccCCccCccccCCe-EECCCC------CEECHHHcCCCcccCCCCccc----ccccc-cccccceeccCCCcccccc
Confidence 99999 89888998887 999988 999999999999999999999 78986 6899999999999999999
Q ss_pred CcCCCCCCCCCCCCCC-CCCCC------CCCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 276 WLCDHDNDCGDGSDEG-KECHD------KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 276 ~~CDg~~dC~d~sDE~-~~C~~------~~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
|+|||+.||.|+|||. .+|.. ....|...+|+|.+|.||+..|+|||+.||.|+|||.+|.
T Consensus 162 ~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~ 229 (791)
T 3m0c_C 162 WACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 229 (791)
T ss_dssp --------------------------------------------------------------------
T ss_pred ccCCCCCcCCCCCCcccccCCCccccCCCCCCCCCCcccccCCceeccccccCCCCCCCCCCCCCCcc
Confidence 9999999999999993 25742 1357889999999999999999999999999999999885
No 4
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=315.21 Aligned_cols=196 Identities=37% Similarity=0.809 Sum_probs=0.0
Q ss_pred CCCCCCccccCC--CceeCCccccCCCCCCCCCCCCCCCccCCcccCCCCCCCCcccCCCccccCCCCCCCCccceeeec
Q psy954 119 ITCDGSKFFCRN--GKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQ 196 (337)
Q Consensus 119 ~~C~~~~f~C~~--g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~~c~c~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~C~ 196 (337)
.+|.+.+|+|.+ ++||+..|+|||+.||.|||||.+ |....| ++.+|.|.+++||+.++. |++..+|.
T Consensus 63 ~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~~--C~~~~C----~~~~f~C~~g~Ci~~~~~----CDg~~dC~ 132 (791)
T 3m0c_C 63 VTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQG--CPPKTC----SQDEFRCHDGKCISRQFV----CDSDRDCL 132 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCcCccccCCCCCCEeeccccCCCCcCcCCCcccCC--ccCccc----cCCeEECCCCCEECHHHc----CCCcccCC
Confidence 369999999998 899999999999999999999986 665544 257899999999987653 99999999
Q ss_pred CCCCC-CCCCCCCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCC-------CCCCCCCcEEeeC
Q psy954 197 TGLMN-HPNNRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPK-------QSSCSPDQFSCGN 268 (337)
Q Consensus 197 ~~~d~-~c~~~~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~-------~~~C~~~~f~C~~ 268 (337)
++.|| +|...+|.+.+ |+|.++ +||+..|+|||+.||.|||||.. .+|.. ...|...+|+|.+
T Consensus 133 dgsDE~~C~~~~C~~~~-f~C~~~------~Ci~~~~~Cdg~~dC~dgsDE~~--~~C~~~~~~~~~~~~C~~~~f~C~~ 203 (791)
T 3m0c_C 133 DGSDEASCPVLTCGPAS-FQCNSS------TCIPQLWACDNDPDCEDGSDEWP--QRCRGLYVFQGDSSPCSAFEFHCLS 203 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccccccccccce-eccCCC------ccccccccCCCCCcCCCCCCccc--ccCCCccccCCCCCCCCCCcccccC
Confidence 99999 89888998887 999988 99999999999999999999942 26732 2578899999999
Q ss_pred CceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 269 GRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 269 g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
|.||+..|+|||+.||.|++|| .+|. ...|.+.+|+|.++.||+..|+|||..||.|++||.+|.
T Consensus 204 g~Ci~~~~~CDg~~dC~dgsDE-~~C~--~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~ 268 (791)
T 3m0c_C 204 GECIHSSWRCDGGPDCKDKSDE-ENCA--VATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCV 268 (791)
T ss_dssp --------------------------------------------------------------------
T ss_pred CceeccccccCCCCCCCCCCCC-CCcc--ccccCCCcceecCCceEecceecCChhccccccccCccc
Confidence 9999999999999999999999 8997 357999999999999999999999999999999999884
No 5
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.88 E-value=4.9e-23 Score=193.71 Aligned_cols=116 Identities=30% Similarity=0.632 Sum_probs=105.0
Q ss_pred CccCCCceEEEEc-CCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCc
Q psy954 1 MRIATGASMVLIS-ATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79 (337)
Q Consensus 1 ~~~dG~~R~vl~~-~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~ 79 (337)
++++|++|++|+. .+.||+||+|+++.|||+||..++|++++|.+|....++...+ ..|++|+||++.+|+...|||+
T Consensus 193 ~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~-~~P~~i~v~~~~~q~~~~n~C~ 271 (318)
T 3sov_A 193 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDI-FSPMDIHAFSQQRQPNATNPCG 271 (318)
T ss_dssp EETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCC-SSCCCEEEECGGGSCCCCCTTT
T ss_pred EcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCC-CCCcEEEEeccccccccccccc
Confidence 3689999999985 7899999999999999999999999999999999888887665 6899999999999987789999
Q ss_pred CCCCCccccccCCCCC-cCeecCCCCcccccCCcccccC
Q psy954 80 IHNGGCAQSCHPGPNG-TAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 80 ~~nggCs~lCl~~~~~-~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
.+||||||||++.|.+ +++|+||.||.|.+|+++|...
T Consensus 272 ~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 272 IDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp TTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred cCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 9999999999999874 4899999999999999999864
No 6
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.88 E-value=1.2e-22 Score=193.25 Aligned_cols=114 Identities=29% Similarity=0.556 Sum_probs=104.5
Q ss_pred CccCCCceEEEE-cCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCc
Q psy954 1 MRIATGASMVLI-SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79 (337)
Q Consensus 1 ~~~dG~~R~vl~-~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~ 79 (337)
++++|++|++++ ..+.||+||||++++|||+||..++|++++|.+|...+++...+ ..|++|+|+|+.+|+...|||+
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~-~~p~gi~v~~~~~qp~~~n~C~ 308 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKL-HFPMDIHTLHPQRQPAGKNRCG 308 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSC-SCCCCEEEECGGGSCCCCCTTT
T ss_pred EeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCC-CCCceEEEEccccCccccCccc
Confidence 357899998888 56899999999999999999999999999999999888887765 7899999999999987789999
Q ss_pred CCCCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 80 IHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 80 ~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
.+||||+||||+.|.+ ++|+||+||+ ..|+++|.+.
T Consensus 309 ~~~g~C~~lCl~~~~~-~~C~C~~g~~-~~d~~~C~~~ 344 (349)
T 3v64_C 309 DNNGGCTHLCLPSGQN-YTCACPTGFR-KINSHACALE 344 (349)
T ss_dssp TGGGGCSSEEECCTTS-CEEECCTTEE-EETTTEEEEG
T ss_pred CCCCCcccEeecCCCC-CeeECCCCCc-CCCCCcccch
Confidence 9999999999999986 9999999999 8899999863
No 7
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.87 E-value=2.2e-22 Score=151.54 Aligned_cols=79 Identities=51% Similarity=1.196 Sum_probs=72.1
Q ss_pred CCCCCCcEEeeCCceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCC-CcEEcCCCCeecCCCCCCCcCCCCCCCCCCCC
Q psy954 257 SSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSS-EEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335 (337)
Q Consensus 257 ~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~~-~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C 335 (337)
.+|+..+|+|.+|+|||..|+|||+.||.|||||..+|. ...|.+ .+|+|.+|+||+..|+|||+.||.|||||.+|
T Consensus 3 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~C~--~~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE~~C 80 (82)
T 2fyj_A 3 RTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCA--YPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGC 80 (82)
T ss_dssp SSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSSCC--CSSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSCSCC
T ss_pred CCCCCCceEeCCCCEEeccccCCCcccCCCccccccccc--cccCCCCCceECCCCCeEcHHHccCCCCcCCCCccccCC
Confidence 468899999999999999999999999999999955786 457854 89999999999999999999999999999999
Q ss_pred CC
Q psy954 336 NY 337 (337)
Q Consensus 336 ~~ 337 (337)
..
T Consensus 81 ~~ 82 (82)
T 2fyj_A 81 SH 82 (82)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 8
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.87 E-value=4.9e-22 Score=191.48 Aligned_cols=112 Identities=29% Similarity=0.565 Sum_probs=103.0
Q ss_pred CccCCCceEEEE-cCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCc
Q psy954 1 MRIATGASMVLI-SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79 (337)
Q Consensus 1 ~~~dG~~R~vl~-~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~ 79 (337)
++++|++|++++ ..+.||+||+|++++|||+||..++|++++|.+|...+++...+ ..|++|+++++.+|+...|||.
T Consensus 273 ~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~-~~p~gi~v~~~~~q~~~~n~C~ 351 (386)
T 3v65_B 273 ANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKL-HFPMDIHTLHPQRQPAGKNRCG 351 (386)
T ss_dssp ECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSC-SCCCCEEEESGGGSCCCCCTTT
T ss_pred EeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCC-CCCceEEEEchhcCcCCcCccc
Confidence 367899998888 56899999999999999999999999999999999888888765 7899999999999987789999
Q ss_pred CCCCCccccccCCCCCcCeecCCCCcccccCCcccc
Q psy954 80 IHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 80 ~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
.+||||+||||+.|.+ ++|+||+||+ ..|+++|.
T Consensus 352 ~~ng~C~~lCl~~~~~-~~C~C~~g~~-~~d~~~C~ 385 (386)
T 3v65_B 352 DNNGGCTHLCLPSGQN-YTCACPTGFR-KINSHACA 385 (386)
T ss_dssp TSCTTSSSEEECCSSS-CEEECCTTCB-CSSSSCCB
T ss_pred cCCCCCCceeeeCCCC-CeeECCCCCc-CCCCCccC
Confidence 9999999999999986 9999999999 88999986
No 9
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.86 E-value=7e-22 Score=185.14 Aligned_cols=115 Identities=26% Similarity=0.600 Sum_probs=102.8
Q ss_pred CccCCCceEEEEc---CCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCC
Q psy954 1 MRIATGASMVLIS---ATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNP 77 (337)
Q Consensus 1 ~~~dG~~R~vl~~---~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~np 77 (337)
++++|++|++|+. .+.||+||++++++|||+||..++|.+++|.+|....++...+ ..|++|+|+++.+|+...||
T Consensus 191 ~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~-~~p~~i~v~~~~~qp~~~n~ 269 (316)
T 1ijq_A 191 IDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENL-LSPEDMVLFHNLTQPRGVNW 269 (316)
T ss_dssp EETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSC-SCCCCEEEESGGGSCCCCCT
T ss_pred EecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEecCC-CCceEEEEeccccCCccccc
Confidence 3678999999873 4689999999999999999999999999999999888887665 67999999999998877799
Q ss_pred CcCC---CCCccccccCCCC-----CcCeecCCCCcccccCCccccc
Q psy954 78 CNIH---NGGCAQSCHPGPN-----GTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 78 C~~~---nggCs~lCl~~~~-----~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
|..+ ||+|+|||++.|. ++++|+||.||+|.+|+++|.+
T Consensus 270 C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 316 (316)
T 1ijq_A 270 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 316 (316)
T ss_dssp TSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC
T ss_pred ccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccCC
Confidence 9998 9999999999873 4589999999999999999964
No 10
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.86 E-value=7.3e-22 Score=191.25 Aligned_cols=116 Identities=26% Similarity=0.605 Sum_probs=103.5
Q ss_pred CccCCCceEEEEc---CCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCC
Q psy954 1 MRIATGASMVLIS---ATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNP 77 (337)
Q Consensus 1 ~~~dG~~R~vl~~---~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~np 77 (337)
++++|++|++|+. .+.|||||+|++++|||+||..++|++++|.+|+...++...+ ..|++|+|||+.+|+...||
T Consensus 273 ~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~-~~p~~i~v~~~~~qp~~~n~ 351 (400)
T 3p5b_L 273 IDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENL-LSPEDMVLFHNLTQPRGVNW 351 (400)
T ss_dssp EETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSC-SCEEEEEEESGGGSCCCCCS
T ss_pred EeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCC-CCCceEEEEeeccCCCCCCc
Confidence 3689999999984 4799999999999999999999999999999999988887765 67999999999999877899
Q ss_pred Cc---CCCCCccccccCCCCC-----cCeecCCCCcccccCCcccccC
Q psy954 78 CN---IHNGGCAQSCHPGPNG-----TAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 78 C~---~~nggCs~lCl~~~~~-----~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
|. .+||+|+|||++.|.. .++|+||.||.|.+|+++|.+.
T Consensus 352 c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 399 (400)
T 3p5b_L 352 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTE 399 (400)
T ss_dssp SSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTCEECTTSSSEESC
T ss_pred cccccCCCcCcCCeecCCCcccCCCCCeeEECCCCCEECCCCCccCCC
Confidence 95 4799999999998752 4899999999999999999863
No 11
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.84 E-value=2.9e-22 Score=149.93 Aligned_cols=76 Identities=43% Similarity=1.029 Sum_probs=70.0
Q ss_pred CCCCCcEEeeCCceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCC--CCC
Q psy954 258 SCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE--FNC 335 (337)
Q Consensus 258 ~C~~~~f~C~~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE--~~C 335 (337)
.|+..+|+|.+|+||+..|+|||+.||.||||| .+|. ...|...+|+|.+|+||+..|+|||+.||.||||| .+|
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE-~~C~--~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~~C 78 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDE-ASCP--VLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 78 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTT-TTHH--HHHCCTTEEECTTSCEEEGGGTTSSSCCSTTCGGGCGGGC
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccc-cccc--cccCCceeeECCCCCEEecccccCCCcCCCCCCCcCcccC
Confidence 478899999999999999999999999999999 8885 34688899999999999999999999999999999 777
Q ss_pred C
Q psy954 336 N 336 (337)
Q Consensus 336 ~ 336 (337)
.
T Consensus 79 ~ 79 (80)
T 2fcw_B 79 R 79 (80)
T ss_dssp -
T ss_pred C
Confidence 4
No 12
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.84 E-value=1.8e-21 Score=198.82 Aligned_cols=115 Identities=24% Similarity=0.495 Sum_probs=103.4
Q ss_pred CccCCCceEEEE-cCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCcc-ccCCCCC
Q psy954 1 MRIATGASMVLI-SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQ-KCSVNPC 78 (337)
Q Consensus 1 ~~~dG~~R~vl~-~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q-~~~~npC 78 (337)
+++||++|++|. ..+.|||||||++++||||||...+|++++|.+|...++++..+ ..|++|++++...+ +...|||
T Consensus 504 ~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~~~-~~~~~i~~~~~~~~~~~~~n~c 582 (628)
T 4a0p_A 504 SDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARI-AQLSDIHAVKELNLQEYRQHPC 582 (628)
T ss_dssp EETTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEECCC-TTEEEEEEECCCCHHHHHHSTT
T ss_pred EeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEeccC-CCCcceEEEeecccCccccccC
Confidence 368999999998 67899999999999999999999999999999999998888776 57899999987653 3456999
Q ss_pred cCCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 79 NIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 79 ~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+.+||||+|||++.+.+.++|+||.||+|.+|+++|..
T Consensus 583 ~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~~ 620 (628)
T 4a0p_A 583 AQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGG 620 (628)
T ss_dssp TTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEEE
T ss_pred CCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCCC
Confidence 99999999999999887789999999999999999974
No 13
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.84 E-value=1.9e-21 Score=198.42 Aligned_cols=112 Identities=26% Similarity=0.546 Sum_probs=101.1
Q ss_pred CccCCCceEEEE-cCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCc
Q psy954 1 MRIATGASMVLI-SATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79 (337)
Q Consensus 1 ~~~dG~~R~vl~-~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~ 79 (337)
++++|++|++|+ ..+.|||||||++++||||||..++|++++|.+| .+++++..+ ..+++|++|++.+|+ ..|||+
T Consensus 506 ~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~~~~-~~~~~i~~~~~~~~~-~~~~C~ 582 (619)
T 3s94_A 506 MNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQL-PDLMGLKATNVHRVI-GSNPCA 582 (619)
T ss_dssp EESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC-CEEEEECSC-CCEEEEEEEESSCCC-CCCGGG
T ss_pred EecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEecCC-CCCceeeeccccccc-ccccCC
Confidence 367999999988 6789999999999999999999999999999999 566666665 679999999998777 459999
Q ss_pred CCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 80 IHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 80 ~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
.+||||+|+|++.+.+ ++|+||.||+|.+|+++|.+
T Consensus 583 ~~ng~C~~~C~~~~~~-~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 583 EENGGCSHLCLYRPQG-LRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp SGGGGCSSEEEEETTE-EEEECCTTCEECSSTTCEEC
T ss_pred CCCCChhHhhccCCCC-eEEECCCCCEECCCCCcCCC
Confidence 9999999999999987 99999999999999999975
No 14
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.83 E-value=4.3e-21 Score=196.03 Aligned_cols=114 Identities=32% Similarity=0.523 Sum_probs=105.0
Q ss_pred CccCCCceEEEEcCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCcC
Q psy954 1 MRIATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCNI 80 (337)
Q Consensus 1 ~~~dG~~R~vl~~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~~ 80 (337)
++++|++|+++...+.||||||+++++||||||..++|++++|.+|+.++++...+ ..|++|+|||+.+|+.. |||+.
T Consensus 193 ~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~-~~p~~i~v~~~~~q~~~-n~C~~ 270 (628)
T 4a0p_A 193 SNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHL-DYVMDILVFHSSRQSGW-NECAS 270 (628)
T ss_dssp EETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSC-CSCCEEEEECGGGSCCC-CTTTT
T ss_pred EcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCC-CCcceeeeeeecccccc-eEecc
Confidence 36889999887788999999999999999999999999999999999998888776 67999999999998865 99999
Q ss_pred CCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 81 HNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 81 ~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+||+|+|+|++.+.++++|+||.||.|..|+++|.+
T Consensus 271 ~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 271 SNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp TGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred CCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 999999999999966699999999999999999975
No 15
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.83 E-value=8.2e-21 Score=142.93 Aligned_cols=78 Identities=51% Similarity=1.181 Sum_probs=69.5
Q ss_pred CCCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCC-CCcEEeeCCceecCCCcCCCCCCC
Q psy954 206 RKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCS-PDQFSCGNGRCINTGWLCDHDNDC 284 (337)
Q Consensus 206 ~~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~-~~~f~C~~g~Ci~~~~~CDg~~dC 284 (337)
++|.+.+ |+|.++ +||++.|+|||+.||.|||||. .+|.. ..|. ..+|+|.+|+||+..|+|||+.||
T Consensus 3 ~~C~~~~-f~C~~g------~Ci~~~~~CDg~~DC~DgsDE~---~~C~~-~~C~~~~~f~C~~g~CI~~~~~CDG~~DC 71 (82)
T 2fyj_A 3 RTCPPNQ-FSCASG------RCIPISWTCDLDDDCGDRSDES---ASCAY-PTCFPLTQFTCNNGRCININWRCDNDNDC 71 (82)
T ss_dssp SSSCTTE-EETTSS------CEEETTSSSSCSSSSCSTTTTT---SSCCC-SSSCSSSEEECTTSCEEETTCBSSSSBCC
T ss_pred CCCCCCc-eEeCCC------CEEeccccCCCcccCCCccccc---ccccc-ccCCCCCceECCCCCeEcHHHccCCCCcC
Confidence 4576665 999988 9999999999999999999994 47876 6785 499999999999999999999999
Q ss_pred CCCCCCCCCCC
Q psy954 285 GDGSDEGKECH 295 (337)
Q Consensus 285 ~d~sDE~~~C~ 295 (337)
.||||| .+|.
T Consensus 72 ~DgSDE-~~C~ 81 (82)
T 2fyj_A 72 GDNSDE-AGCS 81 (82)
T ss_dssp SSSSSC-SCCC
T ss_pred CCCccc-cCCC
Confidence 999999 7774
No 16
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.82 E-value=6.8e-21 Score=194.24 Aligned_cols=115 Identities=30% Similarity=0.639 Sum_probs=98.1
Q ss_pred CccCCCceEEEEc-CCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCc
Q psy954 1 MRIATGASMVLIS-ATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCN 79 (337)
Q Consensus 1 ~~~dG~~R~vl~~-~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~ 79 (337)
++++|++|++|+. .+.|||||++++++||||||.+++|++++|.+|....++...+ ..|++|+|||+.+|+...|||+
T Consensus 198 ~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~-~~p~~i~v~~~~~qp~~~n~C~ 276 (619)
T 3s94_A 198 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDI-FSPMDIHAFSQQRQPNATNPCG 276 (619)
T ss_dssp ESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCC-CCCSEEEECCGGGSCCCCCTTT
T ss_pred ecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCC-CCCcEEEEEccccCCCcccccc
Confidence 3689999999885 7899999999999999999999999999999999888777665 6799999999999998789999
Q ss_pred CCCCCccccccCCCC-CcCeecCCCCcccccCCccccc
Q psy954 80 IHNGGCAQSCHPGPN-GTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 80 ~~nggCs~lCl~~~~-~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
.+||+|||||+++|. .+++|+||.||.|..|+++|.+
T Consensus 277 ~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 277 IDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp TTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred CCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence 999999999999885 3599999999999999999975
No 17
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.80 E-value=7.7e-21 Score=142.18 Aligned_cols=72 Identities=46% Similarity=1.196 Sum_probs=66.0
Q ss_pred CCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeCCceecCCCcCCCCCCCCC
Q psy954 207 KCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGD 286 (337)
Q Consensus 207 ~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~d 286 (337)
+|.+.+ |+|.++ +||+..|+|||+.||.||||| .+|.. ..|+..+|+|.+++|||..|+|||+.||.|
T Consensus 2 ~C~~~~-F~C~~g------~CI~~~~~CDg~~DC~DgSDE----~~C~~-~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~d 69 (80)
T 2fcw_B 2 TCSQAE-FRCHDG------KCISRQFVCDSDRDCLDGSDE----ASCPV-LTCGPASFQCNSSTCIPQLWACDNDPDCED 69 (80)
T ss_dssp CCCTTE-EECTTS------CEEEGGGTTSSSCCSTTCTTT----TTHHH-HHCCTTEEECTTSCEEEGGGTTSSSCCSTT
T ss_pred CCCCCc-cCCCCC------CEEeeecccCCcccCCCcccc----ccccc-ccCCceeeECCCCCEEecccccCCCcCCCC
Confidence 455555 999987 999999999999999999999 78864 578899999999999999999999999999
Q ss_pred CCCC
Q psy954 287 GSDE 290 (337)
Q Consensus 287 ~sDE 290 (337)
||||
T Consensus 70 gsDE 73 (80)
T 2fcw_B 70 GSDE 73 (80)
T ss_dssp CGGG
T ss_pred CCCc
Confidence 9999
No 18
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.52 E-value=3.3e-15 Score=150.69 Aligned_cols=95 Identities=35% Similarity=0.645 Sum_probs=80.4
Q ss_pred eeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeCCceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy954 226 QCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEE 305 (337)
Q Consensus 226 ~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~~~~ 305 (337)
.+++..+.+|+..+|.+.+++ | +...+|+|.++.||+..|+|||+.||.|+||| .+|. .|+..+
T Consensus 182 ~~~~~~h~~DagV~C~~~~~~------c-----~~~~~~~C~~~~ci~~~~~Cdg~~dC~d~sDE-~~C~----~c~~~~ 245 (565)
T 2xrc_A 182 KRRTMGYQDFADVVCYTQKAD------S-----PMDDFFQCVNGKYISQMKACDGINDCGDQSDE-LCCK----ACQGKG 245 (565)
T ss_dssp CCCCCSSCCCCEEEBCCC--------------------CBCTTSCBCCTTSTTSSSCCSSSSSSS-SSBS----SCSSSC
T ss_pred cccccccccCCceeccccccC------C-----CCcCeeECCCCCccCHHHcCCCcccCCCCccc-cccc----ccCCCc
Confidence 567778899999999987766 3 23456999999999999999999999999999 8897 499999
Q ss_pred EEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 306 FACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 306 f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
|+|.++.||+..++|||..||.||+||.+|.
T Consensus 246 ~~C~~~~C~~~~~~cdG~~dC~~gsDE~~C~ 276 (565)
T 2xrc_A 246 FHCKSGVCIPSQYQCNGEVDCITGEDEVGCA 276 (565)
T ss_dssp EEETTTEEECGGGTTSSSCCSSSCTTSSSCC
T ss_pred eecCCCcccCccccCCCcccCCCCccccCcC
Confidence 9999999999999999999999999999985
No 19
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.42 E-value=8.4e-14 Score=140.38 Aligned_cols=103 Identities=29% Similarity=0.558 Sum_probs=83.4
Q ss_pred ccccCCCceeCCccccCCCCCCCCCCCCCCCccCCcccCCCCCCCCcccCCCccccCCCCCCCCccceeeecCCCCCCCC
Q psy954 125 KFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCNVQITGVSQPPGELGVPGHVQITGVSQPPGIVMVMTTVQTGLMNHPN 204 (337)
Q Consensus 125 ~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~~c~c~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~C~~~~d~~c~ 204 (337)
-|.|..+.++...+.+|+..+|.+.+++-
T Consensus 175 l~~C~~~~~~~~~h~~DagV~C~~~~~~c--------------------------------------------------- 203 (565)
T 2xrc_A 175 LAECTFTKRRTMGYQDFADVVCYTQKADS--------------------------------------------------- 203 (565)
T ss_dssp GGGSEEECCCCCSSCCCCEEEBCCC-------------------------------------------------------
T ss_pred hhhcccCcccccccccCCceeccccccCC---------------------------------------------------
Confidence 47787766777788888888887665441
Q ss_pred CCCCCCCCceeeCCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeCCceecCCCcCCCCCCC
Q psy954 205 NRKCDEETEFTCTENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGRCINTGWLCDHDNDC 284 (337)
Q Consensus 205 ~~~C~~~~~f~C~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC 284 (337)
...++|+|.++ +||+..|+|||+.||.|+||| .+|.. |+..+|+|.++.||+..++|||..||
T Consensus 204 ----~~~~~~~C~~~------~ci~~~~~Cdg~~dC~d~sDE----~~C~~---c~~~~~~C~~~~C~~~~~~cdG~~dC 266 (565)
T 2xrc_A 204 ----PMDDFFQCVNG------KYISQMKACDGINDCGDQSDE----LCCKA---CQGKGFHCKSGVCIPSQYQCNGEVDC 266 (565)
T ss_dssp ---------CBCTTS------CBCCTTSTTSSSCCSSSSSSS----SSBSS---CSSSCEEETTTEEECGGGTTSSSCCS
T ss_pred ----CCcCeeECCCC------CccCHHHcCCCcccCCCCccc----ccccc---cCCCceecCCCcccCccccCCCcccC
Confidence 11123889877 999999999999999999999 78864 99999999999999999999999999
Q ss_pred CCCCCCCCCCCC
Q psy954 285 GDGSDEGKECHD 296 (337)
Q Consensus 285 ~d~sDE~~~C~~ 296 (337)
.|++|| .+|..
T Consensus 267 ~~gsDE-~~C~~ 277 (565)
T 2xrc_A 267 ITGEDE-VGCAG 277 (565)
T ss_dssp SSCTTS-SSCC-
T ss_pred CCCccc-cCcCC
Confidence 999999 88864
No 20
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.34 E-value=5.7e-13 Score=87.99 Aligned_cols=40 Identities=50% Similarity=1.175 Sum_probs=36.1
Q ss_pred CCCCCCccccCCCceeCCccccCCCCCCCCCCCCCCCccC
Q psy954 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYCN 158 (337)
Q Consensus 119 ~~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~~~C~ 158 (337)
..|.+.+|+|.+|+||+..|+|||+.||.|||||.+..|.
T Consensus 4 ~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c~C~ 43 (45)
T 1d2l_A 4 PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCH 43 (45)
T ss_dssp CBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTTTCC
T ss_pred CcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCCcCC
Confidence 3588999999999999999999999999999999985543
No 21
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.25 E-value=2.2e-12 Score=81.66 Aligned_cols=35 Identities=46% Similarity=1.129 Sum_probs=32.9
Q ss_pred CCCCCccccCCCceeCCccccCCCCCCCCCCCCCC
Q psy954 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 120 ~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
+|.+.+|+|.+|+||+..|+|||+.||.|||||.+
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~ 35 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEEN 35 (37)
T ss_dssp CCCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTT
T ss_pred CCCCCceEcCCCCeechhhccCCCCCCCCCccccC
Confidence 37889999999999999999999999999999975
No 22
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.24 E-value=3.8e-12 Score=80.58 Aligned_cols=37 Identities=49% Similarity=1.039 Sum_probs=34.7
Q ss_pred CCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 300 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 300 ~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
.|...+|+|.+|+||+..|+|||+.||.|||||.+|+
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 37 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 37 (37)
T ss_dssp CCCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTTCC
T ss_pred CCCCCceEcCCCCeechhhccCCCCCCCCCccccCCC
Confidence 3678899999999999999999999999999999985
No 23
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.23 E-value=6.5e-12 Score=81.80 Aligned_cols=36 Identities=50% Similarity=1.038 Sum_probs=33.2
Q ss_pred CCCCCCccccCC-CceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~~-g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
..|.+.+|+|.+ |+||+..|+|||+.||.|||||.+
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~ 38 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKS 38 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTT
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccC
Confidence 358899999985 899999999999999999999986
No 24
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=99.23 E-value=1.4e-12 Score=85.91 Aligned_cols=38 Identities=50% Similarity=1.299 Sum_probs=34.8
Q ss_pred CCCCCccccCCCceeCCccccCCCCCCCCCCCCCCCcc
Q psy954 120 TCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDPNYC 157 (337)
Q Consensus 120 ~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~~~C 157 (337)
.|.+.+|+|.+|+||+..|+|||+.||.|+|||....|
T Consensus 4 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~~C 41 (44)
T 1j8e_A 4 SCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANC 41 (44)
T ss_dssp SSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHHHH
T ss_pred CCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCccc
Confidence 58899999999999999999999999999999986444
No 25
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.22 E-value=1.1e-13 Score=121.13 Aligned_cols=111 Identities=25% Similarity=0.437 Sum_probs=82.1
Q ss_pred eecCCCCC-CCCCCCCCCCCceee--CCCCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeCCc
Q psy954 194 TVQTGLMN-HPNNRKCDEETEFTC--TENKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGNGR 270 (337)
Q Consensus 194 ~C~~~~d~-~c~~~~C~~~~~f~C--~~~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~g~ 270 (337)
.|..+.|| +| .+|.+.+ |+| .++ +|||..|+|||..||.||||| .+|+. .+|...+|+|.
T Consensus 42 ~c~d~sDE~~C--~~C~~~~-F~C~~~~g------~CIp~~~~CDG~~DC~DgSDE----~~C~~-~~C~~~~F~c~--- 104 (215)
T 2gtl_O 42 SLRHRVEELED--PSCDEHE-HQCGGDDP------QCISKLFVCDGHNDCRNGEDE----KDCTL-PTKAGDKFIGD--- 104 (215)
T ss_dssp HHHHHHHHHSC--CSSCTTE-EECCSSSC------CEEEGGGTTSSSCCSSSCHHH----HCCCC-SSCTTCEEEEE---
T ss_pred cCCcchhhccC--CCCCCcc-eeeCCCCC------cCccccccCCCCCcCCCcccc----cCCCC-CCcCCCceeee---
Confidence 34444555 56 3577765 999 566 999999999999999999999 79987 78999999883
Q ss_pred eecCCCcCCCCCCCCCCCCCCCCCCCCCCCCC--CCcEEcCCC---Ceec-----------CCCCCCCcCCCCCCCCCCC
Q psy954 271 CINTGWLCDHDNDCGDGSDEGKECHDKYRTCS--SEEFACQNF---KCIR-----------KTYHCDGEDDCGDRSDEFN 334 (337)
Q Consensus 271 Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~--~~~f~C~~~---~Ci~-----------~~~~CDg~~dC~dgsDE~~ 334 (337)
+ ++. .|.+.+++ ..|. ..|+ ..+|.|.++ .||. .+|.|||+.+ +|++|..
T Consensus 105 --~-----~~~-~C~~~~~~-~~c~---~~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd--~gs~el~ 170 (215)
T 2gtl_O 105 --V-----CFD-HCTKRRPE-HMTL---AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS--FADHRLT 170 (215)
T ss_dssp --E-----EEE-SSCSSCCS-EEEE---EEEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE--TTTTEEE
T ss_pred --E-----CCC-cccCCCCC-Ccee---eeeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec--CCcceee
Confidence 2 122 37778888 4553 1233 355777665 3777 8899999999 6899876
Q ss_pred C
Q psy954 335 C 335 (337)
Q Consensus 335 C 335 (337)
|
T Consensus 171 ~ 171 (215)
T 2gtl_O 171 I 171 (215)
T ss_dssp E
T ss_pred e
Confidence 5
No 26
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=99.20 E-value=1.8e-12 Score=87.73 Aligned_cols=36 Identities=47% Similarity=1.116 Sum_probs=34.2
Q ss_pred CCCCCCccccCCCceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
.+|.+++|+|.+|+||+..|+|||..||+|||||.+
T Consensus 5 ~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~ 40 (52)
T 2m0p_A 5 ASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKN 40 (52)
T ss_dssp CSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHS
T ss_pred CCCCCCceECCCCCEEecCccCCCCCCCCCCCcccc
Confidence 469999999999999999999999999999999986
No 27
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=99.20 E-value=6.3e-12 Score=82.71 Aligned_cols=36 Identities=53% Similarity=1.179 Sum_probs=32.9
Q ss_pred CCCCCCccccCCCceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCRNGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
..|.+.+|+|.+|+||+..|+|||+.||+|||||.+
T Consensus 6 ~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (44)
T 3a7q_B 6 KECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDD 41 (44)
T ss_dssp --CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSC
T ss_pred CCCCCCceEcCCCCEeChhhccCCCCCCCCCccccC
Confidence 358899999999999999999999999999999976
No 28
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=99.20 E-value=8e-12 Score=81.77 Aligned_cols=36 Identities=42% Similarity=0.997 Sum_probs=33.8
Q ss_pred CCCCCCccccCC-CceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCRN-GKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~~-g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
..|.+++|+|.+ |+||+..|+|||+.||+|||||.+
T Consensus 5 ~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (43)
T 2jm4_A 5 VKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDN 41 (43)
T ss_dssp CSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSS
T ss_pred CCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCC
Confidence 469999999999 899999999999999999999975
No 29
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.19 E-value=3e-12 Score=95.26 Aligned_cols=69 Identities=32% Similarity=0.698 Sum_probs=55.9
Q ss_pred CCCCCCCCCCCceeeCC-CCCCCCCeeecCCCcccCCCCCCCCCccccccCCCCCCCCCCCCcEEeeC--CceecCCCcC
Q psy954 202 HPNNRKCDEETEFTCTE-NKAWNRAQCIPKKWLCDGDPDCVDGADENTTALNCPKQSSCSPDQFSCGN--GRCINTGWLC 278 (337)
Q Consensus 202 ~c~~~~C~~~~~f~C~~-~~~~~~~~Ci~~~~~CDg~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C~~--g~Ci~~~~~C 278 (337)
+|+...|.+.+ |+|.+ + +|||.+|+|||+.||.|||||.. ..+|+...+|...+|+|.+ +.||+..+..
T Consensus 3 ~C~~~~C~~~~-f~C~~~g------~CIp~~~~CDg~~DC~DgsDE~~-~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~g 74 (80)
T 2kny_A 3 KLEGKTCGPSS-FSCPGTH------VCVPERWLCDGDKDCADGADESI-AAGCLYNSTGSGSGSGSTEELRVRLASHLRK 74 (80)
T ss_dssp SCSSCCCSSSE-EECTTSS------CEEEHHHHTTSSCCSSSSTTTSG-GGTCSSSSTTTTCSSCHHHHHHHHTTTTTTT
T ss_pred CCCCCCCCCCc-eecCCCC------eEcChhhcCCCCCCCCCCCcccc-ccCCCCCcccCcccchhhhHHHHHHHHHHHH
Confidence 46667888776 99984 5 99999999999999999999931 1268755789999999998 7899876654
No 30
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=99.18 E-value=1.3e-11 Score=79.02 Aligned_cols=34 Identities=35% Similarity=0.962 Sum_probs=31.9
Q ss_pred CCCCccccCC--CceeCCccccCCCCCCCCCCCCCC
Q psy954 121 CDGSKFFCRN--GKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 121 C~~~~f~C~~--g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
|.+.+|+|.+ |+||+..|+|||++||.|||||.+
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~ 36 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEEN 36 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTT
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCccccc
Confidence 6788999997 899999999999999999999976
No 31
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.18 E-value=2.9e-12 Score=95.37 Aligned_cols=69 Identities=29% Similarity=0.559 Sum_probs=58.0
Q ss_pred CCCCCCCCCCCCcEEee-CCceecCCCcCCCCCCCCCCCCCCC---CCCCCCCCCCCCcEEcCC--CCeecCCCCCCC
Q psy954 251 LNCPKQSSCSPDQFSCG-NGRCINTGWLCDHDNDCGDGSDEGK---ECHDKYRTCSSEEFACQN--FKCIRKTYHCDG 322 (337)
Q Consensus 251 ~~C~~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~d~sDE~~---~C~~~~~~C~~~~f~C~~--~~Ci~~~~~CDg 322 (337)
.+|+. ..|+..+|+|. ++.|||..|+|||+.||.||||| . .|.. ...|...+|+|.+ ++||+..++...
T Consensus 2 ~~C~~-~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE-~~~~~C~~-~~~C~~~~f~c~~~~~~ci~~~~~gLr 76 (80)
T 2kny_A 2 SKLEG-KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADE-SIAAGCLY-NSTGSGSGSGSTEELRVRLASHLRKLR 76 (80)
T ss_dssp CSCSS-CCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTT-SGGGTCSS-SSTTTTCSSCHHHHHHHHTTTTTTTTS
T ss_pred CCCCC-CCCCCCceecCCCCeEcChhhcCCCCCCCCCCCcc-ccccCCCC-CcccCcccchhhhHHHHHHHHHHHHHH
Confidence 36765 78999999998 68999999999999999999999 5 4652 3689999999998 789988776543
No 32
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=99.17 E-value=1.4e-11 Score=81.02 Aligned_cols=38 Identities=42% Similarity=1.045 Sum_probs=34.1
Q ss_pred CCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|...+|+|.+++||+..|+|||+.||.|||||.+|+
T Consensus 6 ~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 6 KECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDCP 43 (44)
T ss_dssp --CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSCC-
T ss_pred CCCCCCceEcCCCCEeChhhccCCCCCCCCCccccCCC
Confidence 46888999999999999999999999999999999996
No 33
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=99.17 E-value=1.8e-11 Score=80.12 Aligned_cols=38 Identities=47% Similarity=1.039 Sum_probs=35.5
Q ss_pred CCCCCCcEEcCC-CCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQN-FKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~~-~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|+..+|+|.+ ++||+..|+|||+.||.|||||.+|.
T Consensus 5 ~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (43)
T 2jm4_A 5 VKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG 43 (43)
T ss_dssp CSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSCC
T ss_pred CCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCCC
Confidence 468889999999 99999999999999999999999985
No 34
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.16 E-value=2.6e-11 Score=78.93 Aligned_cols=38 Identities=42% Similarity=0.981 Sum_probs=34.9
Q ss_pred CCCCCCcEEcC-CCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~-~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|...+|+|. ++.||+..|+|||+.||.|||||.+|+
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 40 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCCC
Confidence 36788999998 599999999999999999999999996
No 35
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=99.16 E-value=9.5e-12 Score=83.08 Aligned_cols=36 Identities=39% Similarity=0.918 Sum_probs=33.1
Q ss_pred CCCCCCccccC-----CCceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCR-----NGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~-----~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
.+|.+.+|+|. +++||+..|+|||++||+|||||.+
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~ 45 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 45 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCC
Confidence 46999999998 7899999999999999999999975
No 36
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=99.14 E-value=1.2e-11 Score=83.73 Aligned_cols=40 Identities=45% Similarity=1.037 Sum_probs=36.8
Q ss_pred CCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCCC
Q psy954 298 YRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCNY 337 (337)
Q Consensus 298 ~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~~ 337 (337)
...|+..+|+|.+|+||+..|+|||..||.|||||.+|.+
T Consensus 4 p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~~~~ 43 (52)
T 2m0p_A 4 PASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCNS 43 (52)
T ss_dssp CCSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHSCCC
T ss_pred CCCCCCCceECCCCCEEecCccCCCCCCCCCCCccccchh
Confidence 4578889999999999999999999999999999998854
No 37
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.14 E-value=2.9e-11 Score=79.76 Aligned_cols=38 Identities=45% Similarity=0.968 Sum_probs=35.2
Q ss_pred CCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|...+|+|.+|+||+..|+|||+.||.|||||..|.
T Consensus 4 ~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c~ 41 (45)
T 1d2l_A 4 PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPAL 41 (45)
T ss_dssp CBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTTT
T ss_pred CcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCCc
Confidence 46888999999999999999999999999999999863
No 38
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=99.13 E-value=2.4e-11 Score=77.77 Aligned_cols=36 Identities=42% Similarity=1.007 Sum_probs=33.6
Q ss_pred CCCCcEEcCC--CCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 301 CSSEEFACQN--FKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 301 C~~~~f~C~~--~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
|++.+|+|.+ ++|||..|+|||+.||.|||||.+|+
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccCC
Confidence 5678999997 89999999999999999999999996
No 39
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=99.10 E-value=2.6e-11 Score=80.97 Aligned_cols=38 Identities=34% Similarity=0.956 Sum_probs=34.8
Q ss_pred CCCCCCcEEcC-----CCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQ-----NFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~-----~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|...+|+|. +++|||..|+|||+.||.|||||.+|+
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~ 47 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 47 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGGC
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCCC
Confidence 46888999998 799999999999999999999999985
No 40
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.10 E-value=3.8e-12 Score=111.33 Aligned_cols=62 Identities=32% Similarity=0.722 Sum_probs=56.2
Q ss_pred CCCCCCCCccccccCCCCCCCCCCCCcEEe--eCCceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEc
Q psy954 237 DPDCVDGADENTTALNCPKQSSCSPDQFSC--GNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCSSEEFAC 308 (337)
Q Consensus 237 ~~dC~dgsDE~~~~~~C~~~~~C~~~~f~C--~~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~~~~f~C 308 (337)
..+|.|++|| ++|. .|+..+|+| .+|+|||..|+|||..||.||||| .+|. ...|.+.+|+|
T Consensus 40 ~~~c~d~sDE----~~C~---~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE-~~C~--~~~C~~~~F~c 103 (215)
T 2gtl_O 40 AGSLRHRVEE----LEDP---SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE-KDCT--LPTKAGDKFIG 103 (215)
T ss_dssp HHHHHHHHHH----HSCC---SSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHH-HCCC--CSSCTTCEEEE
T ss_pred cccCCcchhh----ccCC---CCCCcceeeCCCCCcCccccccCCCCCcCCCcccc-cCCC--CCCcCCCceee
Confidence 4589999999 7894 599999999 799999999999999999999999 9997 45799999998
No 41
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=99.10 E-value=2.8e-11 Score=81.64 Aligned_cols=36 Identities=44% Similarity=0.997 Sum_probs=33.5
Q ss_pred CCCCCCccccC-CCceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~-~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
..|.+.+|+|. +|+||+..|+|||+.||.|||||..
T Consensus 5 ~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~ 41 (50)
T 2knx_A 5 KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESI 41 (50)
T ss_dssp CTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSG
T ss_pred CCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCcccc
Confidence 46999999995 8999999999999999999999986
No 42
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=99.09 E-value=1.7e-11 Score=82.13 Aligned_cols=35 Identities=46% Similarity=1.011 Sum_probs=33.3
Q ss_pred CCCCCccccCCC-ceeCCccccCCCCCCCCCCCCCC
Q psy954 120 TCDGSKFFCRNG-KCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 120 ~C~~~~f~C~~g-~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
+|.+.+|+|.+| +||+..|+|||+.||.|||||.+
T Consensus 6 ~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~ 41 (48)
T 2i1p_A 6 NCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAG 41 (48)
T ss_dssp CCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHS
T ss_pred CCCCCeeECCCCCEeCCHhhcCCCCCCCCCCccccc
Confidence 588999999999 89999999999999999999976
No 43
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=99.07 E-value=5.7e-11 Score=79.29 Aligned_cols=36 Identities=39% Similarity=0.927 Sum_probs=33.1
Q ss_pred CCCCCCccccC-----CCceeCCccccCCCCCCCCCCCCCC
Q psy954 119 ITCDGSKFFCR-----NGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 119 ~~C~~~~f~C~-----~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
..|.+.+|+|. +++|||..|+|||+.||.|||||.+
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~ 43 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 43 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCccccc
Confidence 35899999998 6899999999999999999999975
No 44
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=99.04 E-value=4.1e-11 Score=80.30 Aligned_cols=38 Identities=45% Similarity=0.980 Sum_probs=35.5
Q ss_pred CCCCCCcEEcCCC-CeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQNF-KCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~~~-~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|...+|+|.++ +||+..|+|||+.||.|||||.+|+
T Consensus 5 ~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (48)
T 2i1p_A 5 LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCP 43 (48)
T ss_dssp CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSC
T ss_pred CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCC
Confidence 4688899999999 8999999999999999999999986
No 45
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=99.01 E-value=6.7e-11 Score=77.75 Aligned_cols=37 Identities=46% Similarity=1.075 Sum_probs=34.1
Q ss_pred CCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 335 (337)
Q Consensus 299 ~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C 335 (337)
..|+..+|+|.++.||+..|+|||+.||.|||||..|
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCc
Confidence 3688899999999999999999999999999999864
No 46
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-10 Score=78.65 Aligned_cols=37 Identities=35% Similarity=0.933 Sum_probs=34.1
Q ss_pred CCCCCCcEEcC-CCCeecCCCCCCCcCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNC 335 (337)
Q Consensus 299 ~~C~~~~f~C~-~~~Ci~~~~~CDg~~dC~dgsDE~~C 335 (337)
..|...+|+|. +++||+..|+|||+.||.|||||..|
T Consensus 5 ~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C 42 (50)
T 2knx_A 5 KTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIA 42 (50)
T ss_dssp CTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGG
T ss_pred CCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCccccc
Confidence 46888999995 99999999999999999999999876
No 47
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.99 E-value=4.7e-11 Score=79.72 Aligned_cols=38 Identities=34% Similarity=0.948 Sum_probs=34.7
Q ss_pred CCCCCCcEEcC-----CCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 299 RTCSSEEFACQ-----NFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 299 ~~C~~~~f~C~-----~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|...+|+|. +++|||..|+|||+.||.|||||.+|+
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C~ 45 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 45 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccCC
Confidence 35888999998 789999999999999999999999875
No 48
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.70 E-value=3.1e-09 Score=76.68 Aligned_cols=50 Identities=28% Similarity=0.679 Sum_probs=42.6
Q ss_pred CCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCC
Q psy954 75 VNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRN 130 (337)
Q Consensus 75 ~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~ 130 (337)
.++|+.+||||+|+|+.++.++++|+|+.||.|..|+++|... ++|.|..
T Consensus 5 ~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~------dec~Cg~ 54 (69)
T 1kli_L 5 QLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT------VEYPCGK 54 (69)
T ss_dssp CCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEEC------SSSCTTC
T ss_pred cccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCc------ccccCCC
Confidence 3889999999999999998755999999999999999999874 3566654
No 49
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.68 E-value=8.5e-09 Score=89.52 Aligned_cols=44 Identities=36% Similarity=0.951 Sum_probs=37.9
Q ss_pred CCCCCCccccC--CCceeCCccccCCCCCCCCCCCCCCCccCCc-cc
Q psy954 119 ITCDGSKFFCR--NGKCISRMWSCDGDDDCGDNSDEDPNYCNVQ-IT 162 (337)
Q Consensus 119 ~~C~~~~f~C~--~g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~-~c 162 (337)
.+|.+.+|+|. +|+||+..|+|||++||+|||||.+..|... +|
T Consensus 51 ~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc 97 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVK 97 (220)
T ss_dssp CSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGC
T ss_pred CCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCcc
Confidence 46999999995 5899999999999999999999986567765 44
No 50
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.63 E-value=6.3e-09 Score=71.11 Aligned_cols=46 Identities=30% Similarity=0.783 Sum_probs=39.1
Q ss_pred CcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccC
Q psy954 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCR 129 (337)
Q Consensus 78 C~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~ 129 (337)
|+.+||+|+|+|+.++.++++|+|+.||.|..|+++|... +||.|.
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~------dec~cg 47 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT------VEYPCG 47 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEEC------SSSCTT
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCC------ccccCC
Confidence 6778999999999998756999999999999999999864 455554
No 51
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.61 E-value=2.1e-08 Score=87.08 Aligned_cols=58 Identities=24% Similarity=0.608 Sum_probs=46.7
Q ss_pred CCCCCCcEEee--CCceecCCCcCCCCCCCCCCCCCC-CCCCCCCC-CCCCCc--EEcCCCCeecC
Q psy954 257 SSCSPDQFSCG--NGRCINTGWLCDHDNDCGDGSDEG-KECHDKYR-TCSSEE--FACQNFKCIRK 316 (337)
Q Consensus 257 ~~C~~~~f~C~--~g~Ci~~~~~CDg~~dC~d~sDE~-~~C~~~~~-~C~~~~--f~C~~~~Ci~~ 316 (337)
..|+..+|+|. +|.|||..|+|||..||+|||||. .+|. .. +|.+.+ ++|.++.|+..
T Consensus 51 ~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~--~~~tc~~~qF~g~~~~d~C~kr 114 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCD--TSVVKAGNVFSGTSTWHGCLAR 114 (220)
T ss_dssp CSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGC--GGGGCTTCEEEEEEEECSSCCC
T ss_pred CCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCC--CCCccCCcceeeEecCChhhcC
Confidence 56888999995 689999999999999999999992 3797 33 666555 57778888654
No 52
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.60 E-value=9.6e-09 Score=89.83 Aligned_cols=42 Identities=43% Similarity=0.957 Sum_probs=36.0
Q ss_pred CCCCCCccccCC--CceeCCccccCCCCCCCCCCCCCCCccCCc
Q psy954 119 ITCDGSKFFCRN--GKCISRMWSCDGDDDCGDNSDEDPNYCNVQ 160 (337)
Q Consensus 119 ~~C~~~~f~C~~--g~CI~~~~~CDG~~DC~DgsDE~~~~C~~~ 160 (337)
.+|.+.+|+|.+ |+||+..|+|||.+||+|||||.+..|...
T Consensus 52 ~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~~~ 95 (217)
T 2gtl_M 52 HHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSLN 95 (217)
T ss_dssp CCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHCCG
T ss_pred CCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCCCC
Confidence 469999999965 999999999999999999999974346544
No 53
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.59 E-value=1.3e-08 Score=71.16 Aligned_cols=40 Identities=33% Similarity=0.809 Sum_probs=35.9
Q ss_pred CcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 78 C~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
|+.+||+|+|+|+.++.++++|+|+.||.|..|+++|...
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPA 41 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence 6778999999999998655999999999999999999863
No 54
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.54 E-value=2.1e-08 Score=67.89 Aligned_cols=45 Identities=31% Similarity=0.846 Sum_probs=38.1
Q ss_pred CcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccC
Q psy954 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCR 129 (337)
Q Consensus 78 C~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~ 129 (337)
|+.+||+|+|+|+.++.+ ++|.|+.||.|..|+++|... ++|.|.
T Consensus 1 C~~~ng~C~~~C~n~~gs-~~C~C~~Gy~L~~d~~tC~di------de~pCg 45 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSE-VRCSCAHGYVLGDDSKSCVST------ERFPCG 45 (51)
T ss_dssp CCTTTTSSSSCCCEETTE-ECCCCCTTEEECTTSSCEEEC------SSSCTT
T ss_pred CCCCCCCcCCEeEcCCCC-eEEeCCCCcEECCCCCccccC------CcccCC
Confidence 566789999999998766 999999999999999999864 356664
No 55
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.48 E-value=5e-08 Score=85.31 Aligned_cols=64 Identities=27% Similarity=0.578 Sum_probs=45.9
Q ss_pred CCCCCCcEEeeC--CceecCCCcCCCCCCCCCCCCCCC--CCCCCCCCCCCCcEEcCCCCeecCCCCCCCcCCCCCCCCC
Q psy954 257 SSCSPDQFSCGN--GRCINTGWLCDHDNDCGDGSDEGK--ECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDE 332 (337)
Q Consensus 257 ~~C~~~~f~C~~--g~Ci~~~~~CDg~~dC~d~sDE~~--~C~~~~~~C~~~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE 332 (337)
..|+..+|+|.+ |.|||..|+|||..||.||||| . +|.... .+...+|.+. .....|.++++|
T Consensus 52 ~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE-~~~~C~~~~-~~~~~~~~g~-----------~~~~~C~~~~pe 118 (217)
T 2gtl_M 52 HHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDE-DPETCSLNI-THVGSSYTGL-----------ATWTSCEDLNPD 118 (217)
T ss_dssp CCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTT-SHHHHCCGG-GCTTCEEEEE-----------EEESSSCSCCSE
T ss_pred CCCCCCceecCCCCCcEechhhccCCCCCCCCCCcc-ccCcCCCCc-ccCCcccccc-----------cCcccCCCCCCC
Confidence 578899999964 9999999999999999999999 6 686321 2333355431 233466666665
Q ss_pred C
Q psy954 333 F 333 (337)
Q Consensus 333 ~ 333 (337)
.
T Consensus 119 ~ 119 (217)
T 2gtl_M 119 H 119 (217)
T ss_dssp E
T ss_pred e
Confidence 3
No 56
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.27 E-value=1.7e-07 Score=64.38 Aligned_cols=41 Identities=32% Similarity=0.867 Sum_probs=36.8
Q ss_pred CCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 76 NPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
+.|+..|++|+|+|+.++++ ++|.|+.||.|..|+++|...
T Consensus 2 dEC~~~~~~C~~~C~nt~Gs-y~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNS-VVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTE-EEEECCTTEEECTTSSCEEES
T ss_pred ccccCCCCCcCcEeEcCCCC-eEEeCCCCCEECCCCCeeccC
Confidence 56888889999999998876 999999999999999999864
No 57
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.18 E-value=1.3e-06 Score=87.09 Aligned_cols=33 Identities=48% Similarity=1.196 Sum_probs=31.2
Q ss_pred CCCCCccccC-CCceeCCccccCCCCCCCCCCCCCC
Q psy954 120 TCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDP 154 (337)
Q Consensus 120 ~C~~~~f~C~-~g~CI~~~~~CDG~~DC~DgsDE~~ 154 (337)
.| .+|+|. +|+||+..|+|||.+||+|+|||.+
T Consensus 67 ~c--~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~ 100 (537)
T 3ojy_B 67 RC--EGFVCAQTGRCVNRRLLCNGDNDCGDQSDEAN 100 (537)
T ss_dssp CC--SSEECTTTCCEECGGGTTSSSCCSSSSCTTSS
T ss_pred CC--CccCcCCCCcEeeccccCCCCCCCCCcccccc
Confidence 47 799999 9999999999999999999999987
No 58
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.13 E-value=1.5e-06 Score=87.01 Aligned_cols=64 Identities=33% Similarity=0.807 Sum_probs=47.5
Q ss_pred eeecCCCcccCCCCCCCC-CccccccCCCCCC------CCCCCCcEEee-CCceecCCCcCCCCCCCCCCCCCCCCCCC
Q psy954 226 QCIPKKWLCDGDPDCVDG-ADENTTALNCPKQ------SSCSPDQFSCG-NGRCINTGWLCDHDNDCGDGSDEGKECHD 296 (337)
Q Consensus 226 ~Ci~~~~~CDg~~dC~dg-sDE~~~~~~C~~~------~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~ 296 (337)
|.|.......| ..|... .|+ ..|... ..|. .+|+|. +|+||+..|+|||..||.|+||| .+|..
T Consensus 31 R~v~~p~q~gG-~~C~~~l~d~----~~C~~~~~c~~~~~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE-~~C~~ 102 (554)
T 3ojy_A 31 RSLLQPNKFGG-TICSGDIWDQ----ASCSSSTTCVRQAQCG-QDFQCKETGRCLKRHLVCNGDQDCLDGSDE-DDCED 102 (554)
T ss_dssp CCEEECBCSSC-CCCCSCSEEE----EECCCCCCC--CCCCS-SSEECSSSCCEECGGGTTSSSCCSSSCTTS-SSCCS
T ss_pred EeeccccccCC-CCCCCccccc----cCCCCCCCCcccCCCC-CcCccCCCCEEcccccccCCcccCCCcccc-ccCCC
Confidence 55655555544 457765 555 345432 3453 699999 99999999999999999999999 88974
No 59
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.10 E-value=1.8e-06 Score=86.20 Aligned_cols=77 Identities=31% Similarity=0.636 Sum_probs=51.7
Q ss_pred eeecCCCcccCCCCCCC-CCccccccCCCCCCCCCCC----CcEEee-CCceecCCCcCCCCCCCCCCCCCCCCCCCCCC
Q psy954 226 QCIPKKWLCDGDPDCVD-GADENTTALNCPKQSSCSP----DQFSCG-NGRCINTGWLCDHDNDCGDGSDEGKECHDKYR 299 (337)
Q Consensus 226 ~Ci~~~~~CDg~~dC~d-gsDE~~~~~~C~~~~~C~~----~~f~C~-~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~ 299 (337)
|.|...... |-..|.+ ..|+ ..|.....|+. .+|+|. +|+||+..|+|||..||.|+||| .+|....
T Consensus 33 R~v~~p~q~-gG~~C~~~l~d~----~~C~~~~~C~~~~~c~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE-~~c~~~~- 105 (537)
T 3ojy_B 33 AYLLQPSQF-HGEPCNFSDKEV----EDCVTNRPCRSQVRCEGFVCAQTGRCVNRRLLCNGDNDCGDQSDE-ANCRRIY- 105 (537)
T ss_dssp CCEEECEET-TCCCCCSCSEEE----EECCCCCCCCCCSCCSSEECTTTCCEECGGGTTSSSCCSSSSCTT-SSCSSCS-
T ss_pred eeecccccc-CCCcCccchhhh----ccCCCccccccCCCCCccCcCCCCcEeeccccCCCCCCCCCcccc-ccCCCCC-
Confidence 455544444 3455664 3555 34533233322 799999 99999999999999999999999 8886433
Q ss_pred CCCCCcEEcCCCCeec
Q psy954 300 TCSSEEFACQNFKCIR 315 (337)
Q Consensus 300 ~C~~~~f~C~~~~Ci~ 315 (337)
+.|....+||
T Consensus 106 ------~~C~~~~~~~ 115 (537)
T 3ojy_B 106 ------KKCQHEMDQY 115 (537)
T ss_dssp ------SCCSSCCBCC
T ss_pred ------CccccCcCCC
Confidence 3454445555
No 60
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.05 E-value=3.2e-06 Score=84.53 Aligned_cols=37 Identities=46% Similarity=1.112 Sum_probs=33.2
Q ss_pred CCCCCccccC-CCceeCCccccCCCCCCCCCCCCCCCccCC
Q psy954 120 TCDGSKFFCR-NGKCISRMWSCDGDDDCGDNSDEDPNYCNV 159 (337)
Q Consensus 120 ~C~~~~f~C~-~g~CI~~~~~CDG~~DC~DgsDE~~~~C~~ 159 (337)
.|. ++|+|. +|+||+..|+|||.+||.|+|||.+ |..
T Consensus 65 ~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~--C~~ 102 (554)
T 3ojy_A 65 QCG-QDFQCKETGRCLKRHLVCNGDQDCLDGSDEDD--CED 102 (554)
T ss_dssp CCS-SSEECSSSCCEECGGGTTSSSCCSSSCTTSSS--CCS
T ss_pred CCC-CcCccCCCCEEcccccccCCcccCCCcccccc--CCC
Confidence 474 799999 9999999999999999999999986 553
No 61
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.97 E-value=1.3e-05 Score=71.58 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=54.0
Q ss_pred ccCCCceEEEEcCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeeccC
Q psy954 2 RIATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69 (337)
Q Consensus 2 ~~dG~~R~vl~~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~ 69 (337)
+++|..+++++..+.+|++|++.+++|||++|..+.|+++++.+|.....+.......|.+|.+....
T Consensus 195 ~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 195 NPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp ETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred ecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 45677777777778999999999999999999999999999988876666654322358999886543
No 62
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.80 E-value=4.2e-05 Score=71.10 Aligned_cols=65 Identities=20% Similarity=0.436 Sum_probs=53.6
Q ss_pred ccCCCceEEEE-cCCCCceEEEEE--CCEEEEEeCCCCceEEEecccCCceEEEeecccCCCccceeec
Q psy954 2 RIATGASMVLI-SATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYS 67 (337)
Q Consensus 2 ~~dG~~R~vl~-~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~ 67 (337)
.++|+.+++|+ ..+..|.|||+. ++.|||+|+....|++++. +|..+++++......|.+|.++.
T Consensus 151 ~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~-dG~~~~~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL-DGTNRQAVVKGSLPHPFALTLFE 218 (318)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET-TSCSCEEEECSCCSCEEEEEEET
T ss_pred EcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC-CCCceEEEecCCCCCceEEEEeC
Confidence 57899999888 678999999998 8999999999999999996 56666666653346799998864
No 63
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.79 E-value=4.7e-05 Score=73.00 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=52.2
Q ss_pred CccCCCceEEEE-cCCCCceEEEEE--CCEEEEEeCCC-CceEEEecccCCceEEEeecccCCCccceeec
Q psy954 1 MRIATGASMVLI-SATIYPFAITVH--RNYIYWTDLQL-RGVYRAEKHTGANMIEMVKRLEDSPRDIHVYS 67 (337)
Q Consensus 1 ~~~dG~~R~vl~-~~~~~Pf~Lav~--~d~IYWtDw~~-~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~ 67 (337)
++++|+.+++|+ ..+.+|.+|||. +++||||||.. .+|++++. +|..+++++......|.+|++-.
T Consensus 186 ~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~-dG~~~~~~~~~~l~~P~glavd~ 255 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLVTENIQWPNGITLDL 255 (400)
T ss_dssp ECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET-TSCSCEEEECSSCSCEEEEEEET
T ss_pred EeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC-CCCccEEEEECCCCceEEEEEEe
Confidence 367899999988 578999999997 79999999985 78999886 56666666544346788888753
No 64
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.79 E-value=5e-05 Score=72.33 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=52.2
Q ss_pred CccCCCceEEEE-cCCCCceEEEEE--CCEEEEEeCCC-CceEEEecccCCceEEEeecccCCCccceee
Q psy954 1 MRIATGASMVLI-SATIYPFAITVH--RNYIYWTDLQL-RGVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 1 ~~~dG~~R~vl~-~~~~~Pf~Lav~--~d~IYWtDw~~-~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~ 66 (337)
++++|+.+++|+ ..+.+|.+|+|. +++|||+||.. .+|+|++. +|..+++++......|.+|.+-
T Consensus 186 ~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~-dG~~~~~~~~~~~~~PnGlavd 254 (386)
T 3v65_B 186 ANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM-DGSGRRIIADTHLFWPNGLTID 254 (386)
T ss_dssp CBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET-TSCSCEEEECSSCSCEEEEEEE
T ss_pred EeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC-CCCCcEEEEECCCCCeeeEEEe
Confidence 467899998888 577999999998 89999999998 89999987 4556666654433678888875
No 65
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.76 E-value=3.4e-05 Score=72.54 Aligned_cols=64 Identities=20% Similarity=0.273 Sum_probs=51.5
Q ss_pred ccCCCceEEEE-cCCCCceEEEEE--CCEEEEEeCCC-CceEEEecccCCceEEEeecccCCCccceee
Q psy954 2 RIATGASMVLI-SATIYPFAITVH--RNYIYWTDLQL-RGVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 2 ~~dG~~R~vl~-~~~~~Pf~Lav~--~d~IYWtDw~~-~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~ 66 (337)
+++|+.+++|+ ..+.+|.+|||. +++||||||.. .+|+|++. +|..+++++......|.+|.+-
T Consensus 144 ~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~-dG~~~~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 144 NLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM-DGSGRRIIADTHLFWPNGLTID 211 (349)
T ss_dssp ETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET-TSCSCEESCCSSCSCEEEEEEE
T ss_pred cCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC-CCCCcEEEEECCCCCcceEEEe
Confidence 57899998888 578999999998 89999999998 99999987 4556665554333678888875
No 66
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.53 E-value=0.0002 Score=66.10 Aligned_cols=64 Identities=20% Similarity=0.324 Sum_probs=50.8
Q ss_pred ccCCCceEEEE-cCCCCceEEEEE--CCEEEEEeCCC-CceEEEecccCCceEEEeecccCCCccceee
Q psy954 2 RIATGASMVLI-SATIYPFAITVH--RNYIYWTDLQL-RGVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 2 ~~dG~~R~vl~-~~~~~Pf~Lav~--~d~IYWtDw~~-~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~ 66 (337)
+++|+.+++|+ ..+.+|.+|+|. +++|||+||.. .+|++++. +|+.++++.......|.+|.+-
T Consensus 105 ~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~-dG~~~~~~~~~~~~~P~gla~d 172 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSLVTENIQWPNGITLD 172 (316)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET-TSCCEEEEECSSCSCEEEEEEE
T ss_pred eCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC-CCCCeEEEEECCCCCceEEEEe
Confidence 57888888887 477999999997 89999999986 79999886 5666666654333678888875
No 67
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.40 E-value=5.6e-05 Score=59.57 Aligned_cols=55 Identities=27% Similarity=0.554 Sum_probs=41.6
Q ss_pred CCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCC-CceeCCc
Q psy954 76 NPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRN-GKCISRM 137 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~-g~CI~~~ 137 (337)
++|..+|++|.+.|+.+.++ ++|.|+.||.|..++++|... .+|.|.+ +.||+..
T Consensus 55 ~~C~~~~~~C~~~C~n~~g~-y~C~C~~G~~~~~~g~~C~~~------~~~pC~~~~~~i~~~ 110 (114)
T 1aut_L 55 LNCSLDNGGCTHYCLEEVGW-RRCSCAPGYKLGDDLLQCHPA------VKFPCGRPWKRMEKK 110 (114)
T ss_dssp SSSSSGGGGCSSEEEECSSS-EEEECCTTEEECTTSSCEEEC------SSSCTTCCC------
T ss_pred CcCcCCCCCCCCEeECCCCC-EEeECCCCeeECCCCCccCcC------cccCCCCCCccCCCC
Confidence 57888789999999998776 999999999999999999863 4578876 4788754
No 68
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.31 E-value=7.9e-05 Score=50.13 Aligned_cols=34 Identities=26% Similarity=0.578 Sum_probs=29.5
Q ss_pred CCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 82 NGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 82 nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
++.|.|+|+.++++ |+|.|+.||.|..++++|.+
T Consensus 19 ~~~C~~~C~n~~Gs-y~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 19 QPQCQHLCHNYVGG-YFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SCTTSSEEEEETTE-EEEECSTTCEECTTSSCEEC
T ss_pred CCCCCCEeECCCCC-eEEECCCCCeECCCCCccCC
Confidence 35688999988776 99999999999999998864
No 69
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.27 E-value=0.00014 Score=66.26 Aligned_cols=41 Identities=29% Similarity=0.808 Sum_probs=37.3
Q ss_pred CCCcCC-CCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 76 NPCNIH-NGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 76 npC~~~-nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
|.|..+ ||+|+|+|..+.++ ++|.|+.||.|..++++|.+.
T Consensus 3 ~eC~~~~~~~C~~~C~~~~~~-~~C~C~~G~~l~~d~~sC~p~ 44 (283)
T 3f1s_B 3 NECHPERTDGCQHFCLPGQES-YTCSCAQGYRLGEDHKQCVPH 44 (283)
T ss_dssp CCCCSSCSSSCSSBCCCCTTS-CCCBCCTTEEECTTSSCEEEC
T ss_pred CccCCCCCCCCCCEeeCCCCC-eEecCCCCcccCCCCCccccc
Confidence 789988 89999999988766 999999999999999999873
No 70
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=97.23 E-value=0.00018 Score=76.17 Aligned_cols=33 Identities=45% Similarity=1.137 Sum_probs=31.7
Q ss_pred CcEEcCCCCeecCCCCCCCcCCCCCCCCCCCCC
Q psy954 304 EEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCN 336 (337)
Q Consensus 304 ~~f~C~~~~Ci~~~~~CDg~~dC~dgsDE~~C~ 336 (337)
..|+|.+|+||+..|+|||..||+|+|||.+|+
T Consensus 121 ~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~C~ 153 (913)
T 3t5o_A 121 NKFRCDSGRCIARKLECNGENDCGDNSDERDCG 153 (913)
T ss_dssp SEEECTTSCEEEGGGSSSSSCCSSSSGGGTTCS
T ss_pred cccccCCCceEccceecCCcccCCCccccccCC
Confidence 679999999999999999999999999999985
No 71
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=97.14 E-value=0.0003 Score=74.53 Aligned_cols=40 Identities=43% Similarity=1.061 Sum_probs=35.5
Q ss_pred CcEEeeCCceecCCCcCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy954 262 DQFSCGNGRCINTGWLCDHDNDCGDGSDEGKECHDKYRTCS 302 (337)
Q Consensus 262 ~~f~C~~g~Ci~~~~~CDg~~dC~d~sDE~~~C~~~~~~C~ 302 (337)
..|+|.+|+||+..|+|||..||+|+||| .+|......|.
T Consensus 121 ~~F~C~~g~ci~~~~~c~g~~dC~d~sde-~~C~~~~~~C~ 160 (913)
T 3t5o_A 121 NKFRCDSGRCIARKLECNGENDCGDNSDE-RDCGRTKAVCT 160 (913)
T ss_dssp SEEECTTSCEEEGGGSSSSSCCSSSSGGG-TTCSSCCCSSS
T ss_pred cccccCCCceEccceecCCcccCCCcccc-ccCCCCCCccc
Confidence 67999999999999999999999999999 89975545564
No 72
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.57 E-value=0.0055 Score=54.21 Aligned_cols=64 Identities=19% Similarity=0.314 Sum_probs=46.2
Q ss_pred ccCCCceEEEE-cCCCCceEEEEE--CCEEEEEeCC--CCceEEEecccCCceEEEeecccCCCccceee
Q psy954 2 RIATGASMVLI-SATIYPFAITVH--RNYIYWTDLQ--LRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 2 ~~dG~~R~vl~-~~~~~Pf~Lav~--~d~IYWtDw~--~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~ 66 (337)
+++|+.+++++ ..+..|.+|++. +++|||+|+. ...|++++. +|...+++.......|.+|.+-
T Consensus 107 ~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~-dg~~~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 107 KMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM-DGTNRRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET-TSCCCEEEECTTCSCEEEEEEE
T ss_pred EcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec-CCCCcEEEEECCCCCCcEEEEc
Confidence 46787777777 456899999998 6899999998 578988876 4555555543222457777664
No 73
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.54 E-value=0.00082 Score=52.25 Aligned_cols=43 Identities=35% Similarity=0.688 Sum_probs=35.8
Q ss_pred ccCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
.+..+||...|++|++.|+..+.+ ++|.||.||.+. ++++|..
T Consensus 26 ~Cd~neC~~~~~~C~~~C~n~~g~-y~C~C~~Gy~g~-~g~~C~d 68 (107)
T 2w2n_E 26 AMGTNECLDNNGGCSYVCNDLKIG-YECLCPDGFQLV-AQRRCED 68 (107)
T ss_dssp CBSCCGGGTGGGGCSSEEECCSBS-CEEECCTTCEEE-TTTEEEC
T ss_pred CCcCccCcCCCCCCCCEeEeCCCC-eEEECCCCcccc-CCCcccc
Confidence 456699998889999999998776 999999999985 5667763
No 74
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.30 E-value=0.0018 Score=52.80 Aligned_cols=40 Identities=33% Similarity=0.801 Sum_probs=33.8
Q ss_pred CcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 78 CNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 78 C~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
|...||+|+|.|+..+.++++|.|+.||.|..+|++|...
T Consensus 91 c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~ 130 (142)
T 2c4f_L 91 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 130 (142)
T ss_dssp TTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEES
T ss_pred ccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCC
Confidence 4445889999999987724999999999999999999864
No 75
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.02 E-value=0.0035 Score=51.44 Aligned_cols=41 Identities=29% Similarity=0.705 Sum_probs=31.2
Q ss_pred CCCcCCCCCccccc-cCCCCCcCeecCCCCcccccCCcccccC
Q psy954 76 NPCNIHNGGCAQSC-HPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 76 npC~~~nggCs~lC-l~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
++|...+++|.+.| +..+++ ++|.||.||.|..+|++|...
T Consensus 86 deC~~~~~~C~~~C~~n~~g~-y~C~C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 86 ATCNIKNGRCKQFCKTGADSK-VLCSCTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp CCTTSGGGSCSSBCCCCSSSC-CCCBCCTTEEECTTSSSEEEC
T ss_pred ccccCCCCCCcCCCCCCCCCC-EEeEcCCCcEeCCCCCcCCCC
Confidence 67777677888888 655544 888888888888888888753
No 76
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.48 E-value=0.0033 Score=50.73 Aligned_cols=41 Identities=32% Similarity=0.867 Sum_probs=34.2
Q ss_pred CCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 76 NPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
++|...+++|.+.|+..+++ ++|.|+.||.|..+|++|...
T Consensus 82 d~C~~~~~~C~~~C~~~~g~-y~C~C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQNS-VVCSCARGYTLADNGKACIPT 122 (134)
T ss_dssp CGGGTGGGGCSSEEEEETTE-EEEECCTTEEECTTSSCEEES
T ss_pred CccccCCCCCCCEeECCCCC-EEEECCCCcEECCCCCccCcC
Confidence 66877677898899887655 999999999999999999763
No 77
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.28 E-value=0.0054 Score=51.32 Aligned_cols=40 Identities=28% Similarity=0.704 Sum_probs=34.9
Q ss_pred CCCcCCCCC---ccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 76 NPCNIHNGG---CAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 76 npC~~~ngg---Cs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+.|...+++ |+|.|+..+++ ++|.|+.||+|..++++|..
T Consensus 125 ~eC~~~~~~~~~C~~~C~n~~g~-~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 125 DECQVAPGEAPTCDHHCHNHLGG-FYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CTTCCCTTSCCSSSSEEEEETTE-EEEECCTTEEECTTSSCEEE
T ss_pred CcccCCCCCCCccCCccccCCCC-EEEeCCCCcEECCCCCcccc
Confidence 678877765 99999988776 99999999999999999975
No 78
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.27 E-value=0.0042 Score=53.52 Aligned_cols=49 Identities=29% Similarity=0.803 Sum_probs=37.7
Q ss_pred CCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCCC
Q psy954 76 NPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNG 131 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~g 131 (337)
++|...+++|.+.|+..+++ ++|.|+.||.|..+|++|... ..|.|.+.
T Consensus 82 deC~~~~~~C~~~C~n~~gs-y~C~C~~Gy~l~~dG~~C~~~------~~~PC~~~ 130 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQNS-VVCSCARGYTLADNGKACIPT------GPYPCGKQ 130 (195)
T ss_dssp CGGGTGGGGCSSEEEEETTE-EEEECCTTEEECTTSSCEEES------SSSCTTCC
T ss_pred ccccCCCCCCCCEeECCCCC-eEEECCCCceeCCCCCccccC------CCCCCCCC
Confidence 56877677888899887655 999999999999899888764 24566543
No 79
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.15 E-value=0.0043 Score=45.91 Aligned_cols=58 Identities=29% Similarity=0.713 Sum_probs=36.1
Q ss_pred CCCcCCCCCccc-cccCCCCCcCeecCCCCcccc-cCCcccccCCCCCCCCccccCCCceeC
Q psy954 76 NPCNIHNGGCAQ-SCHPGPNGTAECKCDESTKLV-NEGRMCVAKNITCDGSKFFCRNGKCIS 135 (337)
Q Consensus 76 npC~~~nggCs~-lCl~~~~~~~~C~Cp~g~~L~-~~~~~C~~~~~~C~~~~f~C~~g~CI~ 135 (337)
++|+.+++.|.+ .|+.++.+ ++|.|+.||.+. .+++.|...+ .|......|.++.|+.
T Consensus 4 deC~~~~~~C~~g~C~n~~g~-y~C~C~~Gy~~~~~~g~~C~did-eC~~~~~~C~~~~C~n 63 (86)
T 1lmj_A 4 DECRISPDLCGRGQCVNTPGD-FECKCDEGYESGFMMMKNCMDID-ECQRDPLLCRGGVCHN 63 (86)
T ss_dssp CTTTTCSSTTTTSCEEEETTE-EEECCCSSEEECTTTSSSEEECC-HHHHCSSTTTTSEEEE
T ss_pred ccccCCCCCCCCCEEECCCCC-EEeeCCCCcCccCCCCCccCCcc-cccCCCCcCCCCEeEc
Confidence 344443334543 68877766 999999999875 3577786431 2544444565567764
No 80
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=95.04 E-value=0.017 Score=42.20 Aligned_cols=44 Identities=27% Similarity=0.588 Sum_probs=29.9
Q ss_pred cccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCCCceeCC
Q psy954 88 SCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRNGKCISR 136 (337)
Q Consensus 88 lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~g~CI~~ 136 (337)
.|+.++.+ ++|.||.||.| +++.|...+ .|.. .-.|.++.|+..
T Consensus 18 ~C~n~~g~-y~C~C~~Gy~~--~g~~C~did-eC~~-~~~C~~~~C~n~ 61 (82)
T 1emn_A 18 QCINTDGS-YRCECPFGYIL--AGNECVDTD-ECSV-GNPCGNGTCKNV 61 (82)
T ss_dssp EECCCSSC-CCEECCTTEEE--ETTEEEECC-GGGT-CCTTSSSCEEEC
T ss_pred EEEecCCC-EEEECCCCeEC--CCCccCCcc-cccC-CCCCCCCEeECC
Confidence 67777666 99999999988 567786432 3542 235666677653
No 81
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=94.46 E-value=0.0068 Score=44.82 Aligned_cols=39 Identities=21% Similarity=0.530 Sum_probs=28.8
Q ss_pred CCCcCCCCCcc-ccccCCCCCcCeecCCCCcccccCCcccc
Q psy954 76 NPCNIHNGGCA-QSCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 76 npC~~~nggCs-~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
+.|...++.|. +.|+.++.+ ++|.||.||.|..++++|+
T Consensus 47 deC~~~~~~C~~~~C~n~~g~-y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 47 DECQRDPLLCRGGVCHNTEGS-YRCECPPGHQLSPNISACI 86 (86)
T ss_dssp CHHHHCSSTTTTSEEEEETTE-EEEESCTTSCCCSSSCCCC
T ss_pred ccccCCCCcCCCCEeEcCCCC-EEEECcCCcccCCCCCccC
Confidence 44544444454 478887665 9999999999999998874
No 82
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=94.30 E-value=0.024 Score=41.92 Aligned_cols=40 Identities=23% Similarity=0.624 Sum_probs=29.1
Q ss_pred CCCcCCCCCc-cccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 76 NPCNIHNGGC-AQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 76 npC~~~nggC-s~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
++|+.+++.| .+.|+..+.+ ++|.|+.||.|..++++|..
T Consensus 4 deC~~~~~~C~~~~C~n~~g~-y~C~C~~G~~~~~~g~~C~d 44 (87)
T 1z6c_A 4 DECSLKPSICGTAVCKNIPGD-FECECPEGYRYNLKSKSCED 44 (87)
T ss_dssp CSSSSSSSSBTTSSCCCBTTB-CCCSSSTTCEEETTTTEEEC
T ss_pred ccccCCCCCCCCCEeECCCCC-EEEECCCCceECCCCCcCCC
Confidence 4455444445 3578877765 99999999999888888863
No 83
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.22 E-value=0.065 Score=49.06 Aligned_cols=49 Identities=12% Similarity=0.289 Sum_probs=35.6
Q ss_pred CccCCCceEEEEcCCCCceEEEEECCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 1 MRIATGASMVLISATIYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 1 ~~~dG~~R~vl~~~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
|++||++++.|.....-|| ...+++||||+.....|++++... ..+++|
T Consensus 134 ~~~dGs~~~~lt~~~~~~~--~~~g~~iy~t~~g~~~Iy~~~l~g-~~~~~l 182 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYLFTC--NTSDRYFYYNNPKNGQLYRYDTAS-QSEALF 182 (302)
T ss_dssp EETTSCCCEEEESSCCCCS--EEETTEEEEECTTTCCEEEEETTT-TEEEEE
T ss_pred EECCCCCeEEEeCCCceEe--eEECCEEEEEeCCCceEEEEECCC-CCEEEE
Confidence 6789999988884433344 678999999998888899888644 444444
No 84
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=93.77 E-value=0.012 Score=47.93 Aligned_cols=39 Identities=26% Similarity=0.745 Sum_probs=30.4
Q ss_pred CCCcCCCCCccc-cccCCCCCcCeecCCCCcccccCCcccc
Q psy954 76 NPCNIHNGGCAQ-SCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 76 npC~~~nggCs~-lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
+.|..+++.|.+ .|+.++++ |+|.||.||.+..++++|+
T Consensus 108 deC~~~~~~C~~g~C~n~~g~-y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 108 DECEVFPGVCKNGLCVNTRGS-FKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp CHHHHSTTCSSSSEEEEETTE-EEEECCTTCCBCTTSSCBC
T ss_pred ccccCCCCCCCCCEEECCCCC-EEeeCCCCCccCCCCCeeC
Confidence 555554555654 78887665 9999999999999999884
No 85
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.63 E-value=0.023 Score=46.65 Aligned_cols=40 Identities=23% Similarity=0.448 Sum_probs=32.7
Q ss_pred CCCcCC-CCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 76 NPCNIH-NGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 76 npC~~~-nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+.|... ++.|+|.|+..+++ ++|.|+.||.|..++++|..
T Consensus 118 ~eC~~~~~~~C~~~C~n~~g~-~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 118 NECTDFVDVPCSHFCNNFIGG-YFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CTTTC-CCCCSSSEEEEETTE-EEEECCTTCEECTTSSCEEC
T ss_pred cccCCCCCCCCCCcccCcCCC-EEEecCCCcEECCCCCcccc
Confidence 677764 46799999887666 99999999999999998863
No 86
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.49 E-value=0.11 Score=47.59 Aligned_cols=52 Identities=19% Similarity=0.289 Sum_probs=38.7
Q ss_pred CccCCCceEEEEcCCCCceEEEEECCEEEEEe---CCCCceEEEecccCCceEEEeec
Q psy954 1 MRIATGASMVLISATIYPFAITVHRNYIYWTD---LQLRGVYRAEKHTGANMIEMVKR 55 (337)
Q Consensus 1 ~~~dG~~R~vl~~~~~~Pf~Lav~~d~IYWtD---w~~~~I~r~~k~~G~~~~~l~~~ 55 (337)
|+++|+.+++|...... .+++.+++|||++ -....|++++.. |+..+.|...
T Consensus 93 i~~dg~~~~~l~~~~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~ 147 (302)
T 3s25_A 93 IKRNGHGSTVLDPDPCI--YASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNH 147 (302)
T ss_dssp EETTSCCCEEEECSCEE--EEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESS
T ss_pred EeCCCCcceEeecCCcc--EEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCC
Confidence 57899998888765543 6778999999999 456689998874 6566666544
No 87
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=93.13 E-value=0.018 Score=47.69 Aligned_cols=39 Identities=23% Similarity=0.558 Sum_probs=29.9
Q ss_pred CCCcCCCCCccc-cccCCCCCcCeecCCCCcccccCCcccc
Q psy954 76 NPCNIHNGGCAQ-SCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 76 npC~~~nggCs~-lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
+.|+.+++.|.+ .|+.++.+ |+|.||.||++..++++|+
T Consensus 123 deC~~~~~~C~~g~C~n~~gs-y~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 123 DECQELPGLCQGGKCINTFGS-FQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp CHHHHCGGGGBTSEEEECSSC-EEEECCTTCCBCTTTCBBC
T ss_pred ccccCCCCCcCCCEeEcCCCC-EEeeCCCCccCCCCCCccC
Confidence 455544445653 78888766 9999999999999999884
No 88
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=93.04 E-value=0.017 Score=44.60 Aligned_cols=37 Identities=27% Similarity=0.672 Sum_probs=0.0
Q ss_pred CCCcCCCCCccccccCCCCCcCeecCCCCcccccCCccc
Q psy954 76 NPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMC 114 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C 114 (337)
++|.. .+.|.+.|+.++++ ++|.||.||.+..++++|
T Consensus 70 deC~~-~~~C~~~C~n~~gs-y~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 70 DECQD-PDTCSQLCVNLEGG-YKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp ---------------------------------------
T ss_pred cccCC-CCCcCCeeecCCCC-EEEECCCCceECCCCCcc
Confidence 67763 35688899988766 999999999999998877
No 89
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=89.82 E-value=0.4 Score=45.79 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=36.1
Q ss_pred CCCCceEEEEE--CCEEEEEeCCCCceEEEecccCCceEEEeecccCCCcccee
Q psy954 14 ATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 14 ~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
.+.||.+|++. +++|||+||....|++++..++....+........|.+|.+
T Consensus 224 ~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 224 KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF 277 (430)
T ss_dssp ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEE
T ss_pred cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEE
Confidence 45799999998 58999999999999999986553322222221134666655
No 90
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=89.67 E-value=0.2 Score=33.76 Aligned_cols=37 Identities=30% Similarity=0.587 Sum_probs=22.8
Q ss_pred ccCCCCCcCCCCC-ccccc-cCCCCCcCeecCCCCcccccCCcccc
Q psy954 72 KCSVNPCNIHNGG-CAQSC-HPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 72 ~~~~npC~~~ngg-Cs~lC-l~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
.+..+||+ ||| |..+= +... +.++|.||.||. |+.|.
T Consensus 10 eC~s~pC~--NgGtC~~~~~~d~~-~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 10 EKEKTFCV--NGGECFMVKDLSNP-SRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp STTTTTSC--TTCEEEEECCC--C-CCEEEEECTTEE----STTSC
T ss_pred CCcCCCCC--CCCCcCCCCccCCC-CCEeEeCCCCCc----CCCcC
Confidence 45678998 665 42211 2223 349999999986 55664
No 91
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=88.61 E-value=0.29 Score=44.70 Aligned_cols=41 Identities=29% Similarity=0.808 Sum_probs=31.8
Q ss_pred CCCcCC-CCCccccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 76 NPCNIH-NGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 76 npC~~~-nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
+.|... ++.|.+.|+...++ ++|.|+.||.+..++++|.+.
T Consensus 44 ~eC~~~~~~~C~~~C~~~~g~-~~C~C~~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 44 NECHPERTDGCQHFCLPGQES-YTCSCAQGYRLGEDHKQCVPH 85 (317)
T ss_dssp SSCCTTCTTSCSSEEECCSSS-CEEECCTTEECCTTSSCCEEC
T ss_pred ccCCCCCCCCCcCccccCCCe-eEEeccccccccccccccccc
Confidence 566642 35788889887766 999999999998888888763
No 92
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=88.09 E-value=0.38 Score=48.56 Aligned_cols=60 Identities=20% Similarity=0.494 Sum_probs=42.9
Q ss_pred CCCcCCCCCccc-----cccCCCCCcCeec-CCCCccccc-----------CCcccccCCCCCCCCccccCC-CceeCCc
Q psy954 76 NPCNIHNGGCAQ-----SCHPGPNGTAECK-CDESTKLVN-----------EGRMCVAKNITCDGSKFFCRN-GKCISRM 137 (337)
Q Consensus 76 npC~~~nggCs~-----lCl~~~~~~~~C~-Cp~g~~L~~-----------~~~~C~~~~~~C~~~~f~C~~-g~CI~~~ 137 (337)
++|+.++++|.+ .|+.++.+ ++|. ||.||.... ++++|... ..|......|.+ +.|+...
T Consensus 45 DEC~~~p~~C~~gg~~~~CvNt~gs-Y~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~di-deC~~~~~pC~~~~~Cvnt~ 122 (634)
T 1yo8_A 45 DECALVPDICFSTSKVPRCVNTQPG-FHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPE-NPCKDKTHNCHKHAECIYLG 122 (634)
T ss_dssp CTTTTSCCCSCCCSSSCCEEECSSS-EEECCCCTTEEECCCEESSSHHHHSCCCCEEEC-CTTTTTCCCCCTTEEEEECC
T ss_pred ccccCCCCcccCCccccceeeccCc-eecccCCCCcccCccccccccccccCCCccccc-ccccCCCcccccCccccccc
Confidence 677766667765 79888776 9999 999997543 56677653 247766678875 4788643
No 93
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=88.08 E-value=0.33 Score=35.54 Aligned_cols=38 Identities=34% Similarity=0.749 Sum_probs=28.6
Q ss_pred CCCcCCCCCccccccCCCCCcCeecCC--CCcccccCCccccc
Q psy954 76 NPCNIHNGGCAQSCHPGPNGTAECKCD--ESTKLVNEGRMCVA 116 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~~~~~~C~Cp--~g~~L~~~~~~C~~ 116 (337)
+.|.. +.|.+.|+.++++ ++|.|| .||.|..++++|..
T Consensus 46 deC~~--~~C~~~C~n~~g~-y~C~C~g~~G~~~~~~~~~C~d 85 (87)
T 1z6c_A 46 DECSE--NMCAQLCVNYPGG-YTCYCDGKKGFKLAQDQKSCEV 85 (87)
T ss_dssp CHHHH--SCCSSEECCCSSS-CCEECCSSSCCBCCTTSSSCBC
T ss_pred CeeCC--CCCCCEEEccCCC-EEEECCCCcCCcccCCCCcceE
Confidence 44542 3466789988776 999995 88888888888865
No 94
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=87.17 E-value=0.22 Score=30.54 Aligned_cols=28 Identities=46% Similarity=0.935 Sum_probs=19.3
Q ss_pred cCCCCCcCCCCCccccccCCCCCcCeecCCCCcc
Q psy954 73 CSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTK 106 (337)
Q Consensus 73 ~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~ 106 (337)
+..+||. ||+ .|+....+ ++|.||.||.
T Consensus 6 C~~~pC~--ngg---~C~~~~~~-~~C~C~~G~~ 33 (39)
T 1edm_B 6 CESNPCL--NGG---SCKDDINS-YECWCPFGFE 33 (39)
T ss_dssp TTTCCCC--TTC---EEEEETTE-EEEECCTTCC
T ss_pred CCCCCCC--CCC---EeEcCCCc-eEeECCCCCc
Confidence 4557887 444 45555444 9999999985
No 95
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.96 E-value=1.8 Score=41.20 Aligned_cols=63 Identities=11% Similarity=0.029 Sum_probs=38.6
Q ss_pred ccCCCceEEEEcCCCCceEEEEE--CCEEEEEeCCCC----ceEEEecccCCceEEEeecccCCCcccee
Q psy954 2 RIATGASMVLISATIYPFAITVH--RNYIYWTDLQLR----GVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 2 ~~dG~~R~vl~~~~~~Pf~Lav~--~d~IYWtDw~~~----~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
++++...++|.....+|.+|++. +++|||+|+..+ .|+++.+..+......+..+ ..|.+|.+
T Consensus 165 d~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~-~~p~giav 233 (430)
T 3tc9_A 165 DFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKG-QNCNGAET 233 (430)
T ss_dssp ETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEEC-SSCCCEEE
T ss_pred ECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccC-CCceEEEE
Confidence 34555555666777899999998 568999998543 45556654332211222222 45666665
No 96
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=86.90 E-value=0.22 Score=39.92 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=25.2
Q ss_pred ccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 87 QSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 87 ~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
..|+.++.+ ++|.|+.||++..+++.|.+.
T Consensus 110 ~~C~n~~g~-y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 110 TVCFNTVGS-YSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp SEEEECSSC-EEEECCSSSCBCTTCCSSBTT
T ss_pred CEEECCCCC-EEeeCCCCcccCCCCccCccC
Confidence 578877665 999999999999998888764
No 97
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=86.26 E-value=0.23 Score=38.65 Aligned_cols=30 Identities=33% Similarity=0.767 Sum_probs=17.7
Q ss_pred CccccccCCCCCcCeecCCCCcccccC-Cccc
Q psy954 84 GCAQSCHPGPNGTAECKCDESTKLVNE-GRMC 114 (337)
Q Consensus 84 gCs~lCl~~~~~~~~C~Cp~g~~L~~~-~~~C 114 (337)
.|.+.|+..+++ ++|.|+.||++..+ +++|
T Consensus 88 ~C~~~C~n~~g~-y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 88 FCSGVCHNLPGT-FECICGPDSALAGQIGTDC 118 (118)
T ss_dssp SCSSEEEECSSS-EEEEECSSSSCEEEESCCC
T ss_pred CCcCeEEeCCCC-EEEECCCCCccCCCCCCCC
Confidence 345566665544 67777777766655 5443
No 98
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.23 E-value=1.4 Score=41.66 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=28.1
Q ss_pred CCCceEEEEE-CCEEEEEeC-CCCceEEEecccCC
Q psy954 15 TIYPFAITVH-RNYIYWTDL-QLRGVYRAEKHTGA 47 (337)
Q Consensus 15 ~~~Pf~Lav~-~d~IYWtDw-~~~~I~r~~k~~G~ 47 (337)
+.+|.+|++. .+.||++|+ ....|.+++..+|.
T Consensus 322 ~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 322 FAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred eCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 5789999998 456999999 99999999966664
No 99
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=85.54 E-value=0.41 Score=34.59 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=20.3
Q ss_pred cccCCCCCcCeecCCCCcccccCCccc
Q psy954 88 SCHPGPNGTAECKCDESTKLVNEGRMC 114 (337)
Q Consensus 88 lCl~~~~~~~~C~Cp~g~~L~~~~~~C 114 (337)
.|+..+.+ ++|.|+.||.+..+ ++|
T Consensus 57 ~C~n~~g~-y~C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 57 TCKNVIGG-FECTCEEGFEPGPM-MTC 81 (82)
T ss_dssp CEEECSSS-EEECCSSSSCCCSS-SCC
T ss_pred EeECCCCC-EEeECCCCeEeCCC-Ccc
Confidence 67777665 99999999998877 666
No 100
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=85.52 E-value=0.91 Score=38.99 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=27.4
Q ss_pred cCCCCceEEEEECC-EEEEEeCCCCceEEEeccc
Q psy954 13 SATIYPFAITVHRN-YIYWTDLQLRGVYRAEKHT 45 (337)
Q Consensus 13 ~~~~~Pf~Lav~~d-~IYWtDw~~~~I~r~~k~~ 45 (337)
..+..|.+|++..+ +||++++..+.|.+++..+
T Consensus 189 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 189 TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 34578999999854 9999999999999988744
No 101
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=84.74 E-value=0.55 Score=33.18 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=23.6
Q ss_pred CCCcCCCCCcc--ccccCCCCCcCeec-CCCCcccccCCccc
Q psy954 76 NPCNIHNGGCA--QSCHPGPNGTAECK-CDESTKLVNEGRMC 114 (337)
Q Consensus 76 npC~~~nggCs--~lCl~~~~~~~~C~-Cp~g~~L~~~~~~C 114 (337)
+.|......|. ..|+.++.+ |+|. ++.||.+..++..+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~Gs-y~C~~~~~g~~~~~~~~~~ 44 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYGG-YLCLPRSAAVINDLHGEGP 44 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTCC-EEEEETTSCCCSCCSCSSC
T ss_pred ccccCCCCCCCCCCEeECCCCC-eEecccCCcccccccCCcc
Confidence 34444333453 478888777 9997 55677766666544
No 102
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=84.17 E-value=0.33 Score=39.84 Aligned_cols=30 Identities=23% Similarity=0.464 Sum_probs=25.0
Q ss_pred ccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 87 QSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 87 ~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
+.|+.++.+ |+|.|+.||+|..++++|...
T Consensus 15 ~~C~n~~gs-y~C~C~~Gy~~~~~g~~C~d~ 44 (162)
T 1uzk_A 15 GNCVNTPGS-YICDCPPDFELNPTRVGCVDT 44 (162)
T ss_dssp SEEEEETTE-EEEECCTTCEECTTSSBEECC
T ss_pred CEeECCCCC-EEEeCCCCCeECCCCCcccCC
Confidence 467777665 999999999999899999753
No 103
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=84.11 E-value=0.24 Score=34.08 Aligned_cols=31 Identities=32% Similarity=0.941 Sum_probs=22.0
Q ss_pred cccCCCCCcCCCC--CccccccCCCCCcCeecCCCCccc
Q psy954 71 QKCSVNPCNIHNG--GCAQSCHPGPNGTAECKCDESTKL 107 (337)
Q Consensus 71 q~~~~npC~~~ng--gCs~lCl~~~~~~~~C~Cp~g~~L 107 (337)
..+.++||. || | .|+..+++ ++|.||.||.+
T Consensus 12 d~C~snPC~--nga~g---tC~~~~g~-y~C~C~~Gy~~ 44 (61)
T 2k2s_B 12 AACSSNPCG--PEAAG---TCKETNSG-YICRCNQGYRI 44 (61)
T ss_dssp CHHHHCSSC--SSSCC---EEEECSSE-EEEECCTTEEE
T ss_pred CcCcCCCCc--CCCcc---ccccCCCc-eEeECCCCCcc
Confidence 345668887 44 3 46666655 99999999973
No 104
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=84.11 E-value=0.61 Score=29.58 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=20.0
Q ss_pred CCCcCCCCCccccccC-CCCCcCeecCCCCcccccCCcccc
Q psy954 76 NPCNIHNGGCAQSCHP-GPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 76 npC~~~nggCs~lCl~-~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
+||. ||| .|+. ...++++|.||.||. |+.|.
T Consensus 9 ~pC~--ngg---~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 9 GYCL--NGG---VXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp SCCS--SSC---EEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCCC--CCC---EEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 3887 554 4552 223459999999995 55554
No 105
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=83.69 E-value=0.83 Score=36.94 Aligned_cols=35 Identities=40% Similarity=0.896 Sum_probs=24.0
Q ss_pred ccCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
.+.++||. |++ .|+..+++ ++|.||.||. |+.|..
T Consensus 50 eC~~~pC~--n~g---~C~~~~~~-y~C~C~~G~~----G~~C~~ 84 (146)
T 1x7a_L 50 QCEPNPCL--NGG---LCKDDINS-YECWCQVGFE----GKNCEL 84 (146)
T ss_dssp CCSSCSSC--TTC---EEEECSSC-EEEECCSSEE----STTTCE
T ss_pred cCCCCCCC--CCC---EeECCCCC-EEEecCCCCc----CCcCCC
Confidence 34456775 332 67777666 9999999996 566654
No 106
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=82.15 E-value=0.28 Score=41.24 Aligned_cols=59 Identities=19% Similarity=0.481 Sum_probs=38.9
Q ss_pred ccCCCCCcCCCCCccccccCCCCCcCeecCCCCccccc-CCcccccC-CCCCCCCcccc-CC-CceeC
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVN-EGRMCVAK-NITCDGSKFFC-RN-GKCIS 135 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~-~~~~C~~~-~~~C~~~~f~C-~~-g~CI~ 135 (337)
.+..+||. ++|.|.+.|+..+.+ ++|.|+.||.+.. +++.|... .-.|.. .| .+ +.|+.
T Consensus 93 ~C~~~~C~-~~g~C~~~~~~~~g~-~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n 155 (186)
T 1z1y_A 93 VCQYXNCG-ESGECIVEYLSEIQS-AGCSCAIGXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXN 155 (186)
T ss_dssp GGTTCCCC-TTEEEEEEEETTEEE-EEEEECTEEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEE
T ss_pred cCcCCCCC-CCCEEeeCCcCCCCC-ceEECCCCCcccCCCCCcceEcCCCcccc---cccccCcceec
Confidence 34556775 245677666666555 9999999999865 77888753 124652 67 53 57774
No 107
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=81.96 E-value=1.7 Score=41.52 Aligned_cols=49 Identities=8% Similarity=0.101 Sum_probs=35.2
Q ss_pred CCCCceEEEEEC----CEEEEEeCCCCceEEEecccCCceEEEeecccCCCcccee
Q psy954 14 ATIYPFAITVHR----NYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 14 ~~~~Pf~Lav~~----d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
.+.+|.+|++.. +.|||+|.. ..|++++..+|.-. .+...+ ..|.+|.+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~-~~~~~~-~~P~giav 189 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVD-IKTTNI-GQCADVNF 189 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEE-EECCCC-SCEEEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEE-EeecCC-CCccEEEE
Confidence 467999999994 899999998 89999987666433 333332 45666554
No 108
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.89 E-value=3.2 Score=39.02 Aligned_cols=29 Identities=21% Similarity=0.305 Sum_probs=25.1
Q ss_pred CCce-EEEEE--CCEEEEEeCCCCceEEEecc
Q psy954 16 IYPF-AITVH--RNYIYWTDLQLRGVYRAEKH 44 (337)
Q Consensus 16 ~~Pf-~Lav~--~d~IYWtDw~~~~I~r~~k~ 44 (337)
..|+ +|++. +++|||+|...+.|++++..
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 3588 99999 58999999999999998763
No 109
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=81.25 E-value=0.96 Score=29.79 Aligned_cols=31 Identities=29% Similarity=0.666 Sum_probs=21.0
Q ss_pred CCCcCCCCCcccccc--CCCCCcCeecCCCCcccccCCccccc
Q psy954 76 NPCNIHNGGCAQSCH--PGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 76 npC~~~nggCs~lCl--~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+||. ||| .|+ ...++ ++|.||.||. |+.|..
T Consensus 12 ~pC~--ngg---~C~~~~~~~~-~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 12 GYCL--NGG---VCMHIESLDS-YTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp CSSC--SSC---EEEEESSSSC-EEEECCTTCC----SSSSCC
T ss_pred CcCC--CCc---EEEeeCCCCC-EEEECCCCCc----CCcCCc
Confidence 4887 554 566 44444 9999999995 555643
No 110
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=81.15 E-value=3.6 Score=35.90 Aligned_cols=43 Identities=9% Similarity=0.089 Sum_probs=35.5
Q ss_pred CCCceEEEEcCCCCceEEEEE--CCEEEEEeCCCCceEEEecccC
Q psy954 4 ATGASMVLISATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTG 46 (337)
Q Consensus 4 dG~~R~vl~~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G 46 (337)
.|...++|......|-++++. ++.|||++...+.|++.+..++
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~ 60 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ 60 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC
Confidence 455667777788899999998 5579999999999999998766
No 111
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=81.10 E-value=4.3 Score=36.20 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=29.8
Q ss_pred CCceEEEEECCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 16 IYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 16 ~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
.++.||++.++.||++.|..+.|..++..+++....+
T Consensus 66 ~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 66 YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3555789999999999999999999998776544433
No 112
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=80.22 E-value=1.9 Score=36.87 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=25.7
Q ss_pred cCCCCceEEEEE-CCEEEEEeCCCCceEEEec
Q psy954 13 SATIYPFAITVH-RNYIYWTDLQLRGVYRAEK 43 (337)
Q Consensus 13 ~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k 43 (337)
.....|.+|++. .+.||++++..+.|++++.
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 136 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA 136 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEEC
Confidence 345789999998 6689999999889998854
No 113
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=79.67 E-value=1.9 Score=41.07 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=30.4
Q ss_pred CCCCceEEEEE--CCEEEEEeCCCCceEEEecccCCc
Q psy954 14 ATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 14 ~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
.+.+|.+|++. +++|||+|+..+.|++++..+|..
T Consensus 226 ~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 226 NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 45789999998 589999999999999999877764
No 114
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=79.57 E-value=0.62 Score=39.04 Aligned_cols=55 Identities=24% Similarity=0.491 Sum_probs=38.3
Q ss_pred CCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCC--ccccCC-CceeCCc
Q psy954 74 SVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGS--KFFCRN-GKCISRM 137 (337)
Q Consensus 74 ~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~--~f~C~~-g~CI~~~ 137 (337)
..+||. || .|+..+++ ++|.|+.||++. ++++|... -.|... ...|.+ +.|+...
T Consensus 9 ~~~pC~--ng----~C~~~~g~-~~C~C~~G~~g~-~~~~C~~i-d~C~~~~~~~~C~~~~~C~~~~ 66 (186)
T 1z1y_A 9 VDTICX--NG----QLVQMSNH-FXCMCNEGLVHL-SENTCEEX-NECXXETLGXACGEFGQCIENP 66 (186)
T ss_dssp TTCCCB--TE----EEEECSSC-EEEEECTTEEEE-ETTEEEEC-CCCSGGGTTSEEETTEEEEECS
T ss_pred CCCCCC--CC----EeECCCCC-eEeECCCCCccC-CCCccCCC-CcccCCCCCCCCCCCCEeecCC
Confidence 358887 54 46776665 999999999887 56778743 247644 456876 5888643
No 115
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=79.29 E-value=0.44 Score=38.11 Aligned_cols=34 Identities=21% Similarity=0.556 Sum_probs=22.7
Q ss_pred CCCcCCCC-Ccc--ccccCCCCCcCeecCCCCcccccC
Q psy954 76 NPCNIHNG-GCA--QSCHPGPNGTAECKCDESTKLVNE 110 (337)
Q Consensus 76 npC~~~ng-gCs--~lCl~~~~~~~~C~Cp~g~~L~~~ 110 (337)
++|+..++ .|. ..|+.++.+ ++|.|+.||.+...
T Consensus 45 deC~~~~~~~C~~~~~C~n~~g~-y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 45 NECATLSKVSCGKFSDCWNTEGS-YDCVCSPGYEPVSG 81 (143)
T ss_dssp CGGGC----CCCTTEEEEECSSC-EEEEECTTEEETTC
T ss_pred ccccCCCCCCCCCCCEEEcCCCC-eEeECCCCcccCcC
Confidence 45554322 354 578887766 99999999998754
No 116
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=79.20 E-value=2.5 Score=38.24 Aligned_cols=53 Identities=26% Similarity=0.662 Sum_probs=31.5
Q ss_pred ccCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCC-ccccCCCceeC
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGS-KFFCRNGKCIS 135 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~-~f~C~~g~CI~ 135 (337)
++..+||. |++ .|+....+ ++|.|+.||. |+.|..+-..|... .-.|.+ .|++
T Consensus 7 ~C~~~pC~--~~g---~C~~~~~~-~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~~-~C~~ 60 (317)
T 3h5c_B 7 PCISQPCL--HNG---SCQDSIWG-YTCTCSPGYE----GSNCELAKNECHPERTDGCQH-FCLP 60 (317)
T ss_dssp CTTSCCCT--TTC---CCCCCSSS-CCCCCSSSCC----SSSSCCCSSSCCTTCTTSCSS-EEEC
T ss_pred cCCCCCCC--CCC---EeECCCCC-eEEECCCCCc----CCccccCcccCCCCCCCCCcC-cccc
Confidence 45667886 332 45655555 9999999996 66776322246542 234554 5553
No 117
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=78.95 E-value=2.5 Score=37.94 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=28.8
Q ss_pred CCCceEEEEE--CCEEEEEeC-CCCceEEEecccCCceEEE
Q psy954 15 TIYPFAITVH--RNYIYWTDL-QLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 15 ~~~Pf~Lav~--~d~IYWtDw-~~~~I~r~~k~~G~~~~~l 52 (337)
+..|.+|++. ++.||++|. ....|++.++ +|.....+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~ 181 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQW 181 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEE
T ss_pred cCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEe
Confidence 3589999998 699999995 7889998884 56544444
No 118
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=77.79 E-value=7 Score=34.45 Aligned_cols=42 Identities=17% Similarity=0.250 Sum_probs=34.6
Q ss_pred CCceEEEEcCCCCceEEEEE--CCEEEEEeCCCCceEEEecccCC
Q psy954 5 TGASMVLISATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGA 47 (337)
Q Consensus 5 G~~R~vl~~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~ 47 (337)
+...++|..+...+-+++.. +++|||+|...+.|++.+. +|.
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~ 77 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT 77 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC
Confidence 55666777888899999988 5689999999999999987 554
No 119
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=77.65 E-value=3.8 Score=36.58 Aligned_cols=37 Identities=8% Similarity=0.107 Sum_probs=29.2
Q ss_pred EEEEcCCCCceEEEEE--CCEEEEEeCCCCceEEEeccc
Q psy954 9 MVLISATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHT 45 (337)
Q Consensus 9 ~vl~~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~ 45 (337)
+++...+..|.+|++. +++||++|.....|++++...
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3334556889999998 458999999999999988654
No 120
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=77.64 E-value=5.4 Score=34.25 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=27.5
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCceEEEecccCC
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGA 47 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~ 47 (337)
....|.+|++. .+.||++++..+.|.+++. +|.
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITN-DNT 261 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSC
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECC-CCc
Confidence 45789999998 5689999999899999987 554
No 121
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=77.36 E-value=0.55 Score=40.14 Aligned_cols=52 Identities=29% Similarity=0.673 Sum_probs=6.0
Q ss_pred ccCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCcccccCC-CCCCCCccccCCCcee
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVAKN-ITCDGSKFFCRNGKCI 134 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~-~~C~~~~f~C~~g~CI 134 (337)
.+..+||. ||| .|+...++ |+|.||.||. |+.|...- -.|....-.|.+ .|+
T Consensus 44 eC~~~pC~--ngg---~C~n~~g~-y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~-~C~ 96 (195)
T 1nfu_B 44 QCETSPCQ--NQG---KCKDGLGE-YTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQ-FCH 96 (195)
T ss_dssp -----------------------------------------------CCGGGTGGGGCSS-EEE
T ss_pred ccCCCCCC--CCC---EeECCCCC-eeEeCCCCce----eccccccccccccCCCCCCCC-EeE
Confidence 34456765 332 56766655 9999999997 56675421 125443334443 444
No 122
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=77.09 E-value=4.2 Score=34.99 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=28.0
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCc
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
...+|.+|++. .+.||++++....|++++. +|..
T Consensus 186 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 186 NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE
Confidence 45789999998 6789999999889999987 5543
No 123
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=76.57 E-value=4.1 Score=36.52 Aligned_cols=38 Identities=11% Similarity=0.072 Sum_probs=31.2
Q ss_pred CCCceEEEEEC--CEEEEEeCCCCceEEEecccCCceEEE
Q psy954 15 TIYPFAITVHR--NYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 15 ~~~Pf~Lav~~--d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
+.+|.+|++.. +.||++|+....|.+.+..+|.....+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 35699999983 799999999999999998777655444
No 124
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=76.43 E-value=0.73 Score=37.05 Aligned_cols=37 Identities=30% Similarity=0.855 Sum_probs=27.8
Q ss_pred cCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 73 CSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 73 ~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+..+||. || .|+.++++ ++|.|+.||.+..++++|..
T Consensus 7 C~~~pC~--ng----~C~n~~g~-y~C~C~~G~~g~~~~~~C~~ 43 (147)
T 2w86_A 7 CESSPCI--NG----VCKNSPGS-FICECSSESTLDPTKTICIE 43 (147)
T ss_dssp GGGCCSB--TS----EEEEETTE-EEEECCTTEEECTTSSBEEE
T ss_pred CcCCCCC--CC----EeECCCCC-EEeECCCCcccCCCCCeecC
Confidence 4446775 43 57776655 99999999999888877865
No 125
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=76.40 E-value=2.2 Score=33.66 Aligned_cols=41 Identities=24% Similarity=0.574 Sum_probs=25.2
Q ss_pred cccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCC-CceeC
Q psy954 88 SCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRN-GKCIS 135 (337)
Q Consensus 88 lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~-g~CI~ 135 (337)
.|+..+.+ ++|.|+.||. |..|......|.. -.|.+ +.|+.
T Consensus 20 ~C~~~~g~-~~C~C~~Gy~----G~~C~~~~~~C~~--~~C~~~~~C~~ 61 (135)
T 2vj3_A 20 KCINTLGS-FECQCLQGYT----GPRCEIDVNECVS--NPCQNDATCLD 61 (135)
T ss_dssp EEEECSSS-EEEECCTTEE----STTSCEECCTTTT--CCCCSSCEEEE
T ss_pred EeECCCCC-EEEECCCCCc----CCcccccCccCCC--CCCCCCCEEeC
Confidence 67776655 9999999996 3456422223543 24654 46764
No 126
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=76.26 E-value=3.1 Score=41.87 Aligned_cols=59 Identities=22% Similarity=0.617 Sum_probs=39.6
Q ss_pred CCCcCCCCCcc--ccccCCC---CCcCeecCCCCcccccCCccccc---------CCCCCCCC-ccccCCCceeCC
Q psy954 76 NPCNIHNGGCA--QSCHPGP---NGTAECKCDESTKLVNEGRMCVA---------KNITCDGS-KFFCRNGKCISR 136 (337)
Q Consensus 76 npC~~~nggCs--~lCl~~~---~~~~~C~Cp~g~~L~~~~~~C~~---------~~~~C~~~-~f~C~~g~CI~~ 136 (337)
++|...++.|. ..|+..+ .++++|.|+.||. .+++.|.. ....|... .+.|....|+..
T Consensus 103 deC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~--GdG~~Ce~d~DiDeC~~~~~~C~~~~~y~C~~dnC~~~ 176 (634)
T 1yo8_A 103 NPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYA--GDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHL 176 (634)
T ss_dssp CTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEE--ESSSSEEECTTSSSSCSSCCTTTTTCSSSCSCCSSTTS
T ss_pred ccccCCCcccccCccccccccccccceeeeccCCcc--ccCcccccccCcccccCCCCcccCCCCccccccccccc
Confidence 67776556675 5798877 2559999999997 35677752 12346532 677777777764
No 127
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=75.50 E-value=0.67 Score=36.85 Aligned_cols=34 Identities=35% Similarity=0.906 Sum_probs=0.0
Q ss_pred cCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 73 CSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 73 ~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+..+||. |++ .|+..+.+ ++|.||.||. |+.|..
T Consensus 45 C~~~pC~--n~g---~C~~~~~~-y~C~C~~G~~----G~~C~~ 78 (134)
T 2vh0_B 45 CETSPCQ--NQG---KCKDGLGE-YTCTCLEGFE----GKNCEL 78 (134)
T ss_dssp --------------------------------------------
T ss_pred CCCCCCC--CcC---CcccCCCC-EEeeCCCCcc----CCcccc
Confidence 4446665 322 56666555 9999999997 556654
No 128
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=74.26 E-value=8.5 Score=34.23 Aligned_cols=38 Identities=8% Similarity=-0.123 Sum_probs=31.4
Q ss_pred CCceE--EEEECCEEEEEeCCCCceEEEecccCCceEEEe
Q psy954 16 IYPFA--ITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMV 53 (337)
Q Consensus 16 ~~Pf~--Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~ 53 (337)
..+|+ |++.++.||-.+|+.+.|+.++..+++....+.
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence 46666 899999999999999999999998877555443
No 129
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.24 E-value=5.8 Score=34.03 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=28.4
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCce
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANM 49 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~ 49 (337)
....|.+|++. .+.||++++....|++++. +|...
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 45789999998 5689999998899999988 66533
No 130
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=73.92 E-value=3.1 Score=32.84 Aligned_cols=35 Identities=40% Similarity=1.042 Sum_probs=20.7
Q ss_pred cCCCCCcCCCCCccccccCCCC-CcCeecCCCCcccccCCccccc
Q psy954 73 CSVNPCNIHNGGCAQSCHPGPN-GTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 73 ~~~npC~~~nggCs~lCl~~~~-~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+..+||. |++ +|+.... ++++|.|+.||. |+.|..
T Consensus 3 C~~~pC~--~~g---~C~~~~~~g~~~C~C~~G~~----G~~C~~ 38 (143)
T 4d90_A 3 CDPNPCE--NGG---ICLPGLADGSFSCECPDGFT----DPNCSS 38 (143)
T ss_dssp CCSCCCG--GGC---EEEC-----CCEEECCTTCC----TTTTCS
T ss_pred CCCCcCC--CCC---EeeCCCCCCCEEeECCCCCC----CCCCcc
Confidence 3456776 222 6776553 459999999996 455643
No 131
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=73.47 E-value=5.9 Score=33.98 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=28.3
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCc
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
....|.+|++. .+.||++++..+.|.+++. +|..
T Consensus 181 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 181 PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE
Confidence 45789999998 4689999999999999998 7653
No 132
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=73.28 E-value=4.9 Score=37.27 Aligned_cols=42 Identities=10% Similarity=0.128 Sum_probs=33.8
Q ss_pred ceEEEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCc
Q psy954 7 ASMVLISATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 7 ~R~vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
..++|.+++.+|.+|++. ++.||.++...+.|+++...+|..
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~ 65 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK 65 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE
Confidence 345566899999999998 668999999889999997655543
No 133
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=73.07 E-value=10 Score=33.94 Aligned_cols=40 Identities=13% Similarity=-0.006 Sum_probs=31.4
Q ss_pred cCCCCceEEEE-ECCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 13 SATIYPFAITV-HRNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 13 ~~~~~Pf~Lav-~~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
.....|.+|++ .+++||+++...+.|.+++..++.....+
T Consensus 81 ~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 81 TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 34578999999 78899999976789999998776544333
No 134
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=72.00 E-value=1.2 Score=34.36 Aligned_cols=31 Identities=26% Similarity=0.681 Sum_probs=22.6
Q ss_pred CCCcCCCCCccccccCC-CCCcCeecCCCCccccc
Q psy954 76 NPCNIHNGGCAQSCHPG-PNGTAECKCDESTKLVN 109 (337)
Q Consensus 76 npC~~~nggCs~lCl~~-~~~~~~C~Cp~g~~L~~ 109 (337)
++|+ +..|.+.|+.+ +.+ ++|.|+.||.+..
T Consensus 5 deC~--~~pC~~~C~~~~~g~-y~C~C~~Gy~g~~ 36 (118)
T 1dx5_I 5 DPCF--RANCEYQCQPLDQTS-YLCVCAEGFAPIP 36 (118)
T ss_dssp CGGG--GCCCSSEEEECSSSC-EEEECCTTEEEET
T ss_pred ccCC--CCCCCCCCCCCCCCC-EEeECCCCccccC
Confidence 4453 23466789988 555 9999999998764
No 135
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=71.92 E-value=1 Score=29.82 Aligned_cols=32 Identities=22% Similarity=0.440 Sum_probs=21.0
Q ss_pred CCCCcCCCCCccccccC-CCCCcCeecCCCCcccccCCcccc
Q psy954 75 VNPCNIHNGGCAQSCHP-GPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 75 ~npC~~~nggCs~lCl~-~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
.+||. ||| .|+. ...++++|.||.||. |+.|.
T Consensus 11 ~~pC~--nGG---~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 11 DGYCL--HDG---VCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CCEEC--TTC---EEEEETTTTEEEEEECTTEE----STTSC
T ss_pred CCCCC--CCe---EEeeecCCCCEEEecCCCCc----CCCCC
Confidence 47887 655 3542 223449999999996 55664
No 136
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=71.90 E-value=5.2 Score=39.07 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=27.6
Q ss_pred CCCCceEEEEEC--CEEEEEeCCCCceEEEecc
Q psy954 14 ATIYPFAITVHR--NYIYWTDLQLRGVYRAEKH 44 (337)
Q Consensus 14 ~~~~Pf~Lav~~--d~IYWtDw~~~~I~r~~k~ 44 (337)
...||++|++.. ++||++|+..+.|++++..
T Consensus 245 ~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 245 AYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 347999999984 8999999999999999986
No 137
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=70.90 E-value=1.8 Score=29.47 Aligned_cols=37 Identities=27% Similarity=0.503 Sum_probs=22.6
Q ss_pred cCCCCCcCCCCC-ccccccCCCCCcCeecCCCCcccccCCcccc
Q psy954 73 CSVNPCNIHNGG-CAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 73 ~~~npC~~~ngg-Cs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
+..+||. ||| |..+--....+.++|.||.||. |+.|.
T Consensus 9 C~~~pC~--ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 9 KEKTFCV--NGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp HHHTTSC--TTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred CCCCcCC--CCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 4558887 554 4322211223459999999995 66675
No 138
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=70.25 E-value=6 Score=36.81 Aligned_cols=63 Identities=16% Similarity=0.213 Sum_probs=42.8
Q ss_pred ccCCCceEEEEcCCCCceEEEEE--CCEEEEEeCCCCceEEEecc-cCC--ceEEEeecccCCCccceee
Q psy954 2 RIATGASMVLISATIYPFAITVH--RNYIYWTDLQLRGVYRAEKH-TGA--NMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 2 ~~dG~~R~vl~~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~-~G~--~~~~l~~~~~~~p~gI~v~ 66 (337)
+++....+++..++..|-||++. +.+||++|...+.|++.... +|. ...++ .+...|-+|++-
T Consensus 207 r~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD 274 (355)
T 3sre_A 207 YYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVD 274 (355)
T ss_dssp EECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEEC
T ss_pred EEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEe
Confidence 34555556666888999999998 66999999999999988764 332 12222 223446666664
No 139
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.92 E-value=2.3 Score=41.09 Aligned_cols=96 Identities=21% Similarity=0.480 Sum_probs=0.0
Q ss_pred ceEEEEE-CCEEEEEeC-------CCCceEEEecccCCceEEEeecccCCCccceeeccCccccCCCCCcCCCCCccccc
Q psy954 18 PFAITVH-RNYIYWTDL-------QLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVYSADSQKCSVNPCNIHNGGCAQSC 89 (337)
Q Consensus 18 Pf~Lav~-~d~IYWtDw-------~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~~q~~~~npC~~~nggCs~lC 89 (337)
|.+|++- .+.||.+|+ ..++|+|+..-... .....-+.+..-..-....|. .+|. ||.|
T Consensus 338 ~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~------~~p~~C~~~~~g~~c~~~~C~-~~C~--nG~C---- 404 (463)
T 2wg3_C 338 ILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP------LMPEECRATVQPAQTLTSECS-RLCR--NGYC---- 404 (463)
T ss_dssp EEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC------SSCGGGCCCCCCCCCCCCHHH-HHCC--SEEE----
T ss_pred ceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc------cccccCCCCCcCCCCcccccc-CCCC--CCcc----
Q ss_pred cCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCC-CceeCCcccc
Q psy954 90 HPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRN-GKCISRMWSC 140 (337)
Q Consensus 90 l~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~-g~CI~~~~~C 140 (337)
....+|.|+.||. |..|... .|.+ .|.+ |.|+.. .+|
T Consensus 405 ----~~~~~C~C~~G~~----G~~C~~~--~C~~---~C~~~g~C~~~-~~C 442 (463)
T 2wg3_C 405 ----TPTGKCCCSPGWE----GDFCRTA--KCEP---ACRHGGVCVRP-NKC 442 (463)
T ss_dssp ----CTTSCEEECTTEE----STTSCEE--CC--------------------
T ss_pred ----CCCCeECCCCCcC----CCcCCcC--cCCC---CCCCCCEECCC-CEE
No 140
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=69.70 E-value=12 Score=32.99 Aligned_cols=33 Identities=9% Similarity=0.055 Sum_probs=25.4
Q ss_pred CCCCceEEEEE--CCEEEEEeCCC-----CceEEEecccC
Q psy954 14 ATIYPFAITVH--RNYIYWTDLQL-----RGVYRAEKHTG 46 (337)
Q Consensus 14 ~~~~Pf~Lav~--~d~IYWtDw~~-----~~I~r~~k~~G 46 (337)
.+..|.+|++. +.+|||++... ..|++.+...+
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 56788999998 55899999874 67888776543
No 141
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=68.78 E-value=10 Score=33.47 Aligned_cols=51 Identities=10% Similarity=0.039 Sum_probs=35.6
Q ss_pred CCCCceEEEEECCEEEEEeCCCCceEEEeccc-CC--ceEEEeecccCCCccceee
Q psy954 14 ATIYPFAITVHRNYIYWTDLQLRGVYRAEKHT-GA--NMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 14 ~~~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~-G~--~~~~l~~~~~~~p~gI~v~ 66 (337)
.+..|.+|+..+++||++|+..+.|++++... |. ...++. .+ ..|.+|.+-
T Consensus 167 ~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~-~~P~gi~vd 220 (306)
T 2p4o_A 167 VFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQ-TNIDDFAFD 220 (306)
T ss_dssp CSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ES-CCCSSEEEB
T ss_pred CCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-cc-CCCCCeEEC
Confidence 34689999777899999999999999998753 33 122332 22 457777664
No 142
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=67.10 E-value=13 Score=33.20 Aligned_cols=47 Identities=11% Similarity=0.140 Sum_probs=35.1
Q ss_pred CceEEEEECCEEEEEeCC-CCceEEEecccCCceEEEeecccCCCcccee
Q psy954 17 YPFAITVHRNYIYWTDLQ-LRGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 17 ~Pf~Lav~~d~IYWtDw~-~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
.|.+|++.+++||-++|. .+.|..++..++.....+.. ...|.+|.+
T Consensus 132 ~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~ 179 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI--GIQPTSLVM 179 (328)
T ss_dssp BCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--SSCBCCCEE
T ss_pred CcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--CCCccceEE
Confidence 899999999999999994 88999999877764444432 234555554
No 143
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=66.92 E-value=8.4 Score=33.81 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=31.8
Q ss_pred CCCceEEEEE-CCEEEEEeCCCCceEEEecccCCceEEEe
Q psy954 15 TIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANMIEMV 53 (337)
Q Consensus 15 ~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~~~l~ 53 (337)
..+|.+|++. ++.||.+.|..+.|.+++..+|.....+.
T Consensus 198 ~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 198 EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 3689999997 67899999999999999988887555443
No 144
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=66.88 E-value=9.4 Score=34.38 Aligned_cols=39 Identities=5% Similarity=-0.047 Sum_probs=30.3
Q ss_pred CCCCceEEEEE-CCEEEEEeCC-----CCceEEEecccCCceEEE
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQ-----LRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~-----~~~I~r~~k~~G~~~~~l 52 (337)
.+.+|++|++. .+.|||+|.. ..+|++++..+|.....+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~ 109 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVI 109 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEE
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEE
Confidence 35799999998 4889999987 578999998777633333
No 145
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=66.80 E-value=7.5 Score=34.43 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=26.0
Q ss_pred CCceEEEEE-CCEEEEEeCCCCceEEEeccc
Q psy954 16 IYPFAITVH-RNYIYWTDLQLRGVYRAEKHT 45 (337)
Q Consensus 16 ~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~ 45 (337)
..|.+|++. .+.|||+|...+.|++++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g 62 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG 62 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC
Confidence 789999996 567999999999999998753
No 146
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=66.35 E-value=2.1 Score=27.34 Aligned_cols=30 Identities=23% Similarity=0.505 Sum_probs=19.8
Q ss_pred CCCcCCCCCccccccCCC-CCcCeecCCCCcccccCCcccc
Q psy954 76 NPCNIHNGGCAQSCHPGP-NGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 76 npC~~~nggCs~lCl~~~-~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
+||. ||-| +... .++++|.||.||. |+.|.
T Consensus 12 ~pC~--nG~C----~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 12 GYCL--HGQC----IYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp SSCS--SEEE----EEETTTTEEEEEECTTCS----STTSC
T ss_pred CCCC--CCEe----eccCCCCCEEEECCCCCc----cCCCC
Confidence 8887 4544 4322 2458999999996 55554
No 147
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=65.63 E-value=5.6 Score=31.17 Aligned_cols=42 Identities=21% Similarity=0.578 Sum_probs=26.5
Q ss_pred ccccCCCCCcCeecCCCCcccccCCcccccCCCCCCCCccccCC-CceeC
Q psy954 87 QSCHPGPNGTAECKCDESTKLVNEGRMCVAKNITCDGSKFFCRN-GKCIS 135 (337)
Q Consensus 87 ~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~~~~C~~~~f~C~~-g~CI~ 135 (337)
..|+..+.+ ++|.|+.||. |..|......|.. -.|.+ +.|+.
T Consensus 57 ~~C~~~~g~-~~C~C~~G~~----G~~C~~~~~~C~~--~~C~~~g~C~~ 99 (135)
T 2vj3_A 57 ATCLDQIGE-FQCICMPGYE----GVHCEVNTDECAS--SPCLHNGRCLD 99 (135)
T ss_dssp CEEEECSSC-EEEECCTTEE----SSSSCEECCTTTT--CCSTTTCEEEE
T ss_pred CEEeCCCCC-ceeeCCCCCc----CCcceecCCcccC--CCcCCCCEeEC
Confidence 367776655 9999999997 4556432223543 35665 57774
No 148
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=63.40 E-value=3 Score=30.56 Aligned_cols=35 Identities=34% Similarity=0.795 Sum_probs=23.8
Q ss_pred ccCCCCCcCCCCCccccccCCC-CCcCeecCCCCcccccCCcccc
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGP-NGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~-~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
.+..+||. ||| .|+..+ .++++|.||.||. |+.|.
T Consensus 50 ~C~~~pC~--ngg---~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 50 SCSEPRCF--NGG---TCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp ECSSCCSC--TTC---EEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred cccCCCCC--CCC---EeecCCCCCCeEeECCCCCc----CCcCC
Confidence 45567887 544 566655 2449999999995 56664
No 149
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=62.59 E-value=11 Score=33.70 Aligned_cols=38 Identities=8% Similarity=-0.068 Sum_probs=31.1
Q ss_pred CCceE--EEEECCEEEEEeCCCCceEEEecccCCceEEEe
Q psy954 16 IYPFA--ITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMV 53 (337)
Q Consensus 16 ~~Pf~--Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~ 53 (337)
..+|+ |++.++.||-..|+.+.|+.++..+++....+.
T Consensus 94 ~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 94 GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 35666 999999999999999999999988776554443
No 150
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=61.98 E-value=11 Score=32.43 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=27.0
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCceEEEecccCC
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGA 47 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~ 47 (337)
.+..|.+|++. .+.||.+++....|++.+. +|.
T Consensus 162 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 195 (286)
T 1q7f_A 162 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQ 195 (286)
T ss_dssp TCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCC
T ss_pred ccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCC
Confidence 35689999998 4789999999999998886 444
No 151
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=61.52 E-value=18 Score=31.68 Aligned_cols=37 Identities=11% Similarity=-0.020 Sum_probs=29.8
Q ss_pred CCce--EEEEECCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 16 IYPF--AITVHRNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 16 ~~Pf--~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
.++| ||++.++.||-.+|+.+.|+..+..+++....+
T Consensus 63 ~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 63 PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 3555 568999999999999999999998877644444
No 152
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=61.29 E-value=6.5 Score=29.90 Aligned_cols=18 Identities=22% Similarity=0.636 Sum_probs=14.3
Q ss_pred cccCCCCCcCeecCCCCcc
Q psy954 88 SCHPGPNGTAECKCDESTK 106 (337)
Q Consensus 88 lCl~~~~~~~~C~Cp~g~~ 106 (337)
.|+...++ ++|.|+.||.
T Consensus 27 ~C~~~~~~-y~C~C~~G~~ 44 (114)
T 1aut_L 27 TCIDGIGS-FSCDCRSGWE 44 (114)
T ss_dssp EECCCSSC-CCEEECTTEE
T ss_pred CCCCCCCC-cEeeCCCCCc
Confidence 56666555 9999999996
No 153
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=60.99 E-value=15 Score=33.46 Aligned_cols=35 Identities=6% Similarity=0.034 Sum_probs=28.9
Q ss_pred ceEEEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEe
Q psy954 7 ASMVLISATIYPFAITVH-RNYIYWTDLQLRGVYRAE 42 (337)
Q Consensus 7 ~R~vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~ 42 (337)
..++|.+++.+|.+|++. .+.||.++.. +.|++++
T Consensus 22 ~~~~va~~l~~P~~ia~~pdG~l~V~e~~-g~I~~i~ 57 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLPDGGMLIAERP-GRIRLFR 57 (352)
T ss_dssp CEEEEECCCSCEEEEEECTTSCEEEEETT-TEEEEEE
T ss_pred EEEEEECCCCCceEEEEcCCCeEEEEeCC-CeEEEEE
Confidence 456666889999999997 4579999986 8899887
No 154
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=60.10 E-value=24 Score=30.42 Aligned_cols=46 Identities=9% Similarity=-0.056 Sum_probs=33.5
Q ss_pred CCCceEEEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCceE
Q psy954 4 ATGASMVLISATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANMI 50 (337)
Q Consensus 4 dG~~R~vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~~ 50 (337)
++. .+++......|.+|++. .+.||+++.....|++.+..+|....
T Consensus 58 ~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 58 DGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp TSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred CCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 344 44444445679999997 66799999988899999987776433
No 155
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=58.03 E-value=2 Score=28.04 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=20.3
Q ss_pred CCCCcCCCCCccccccCC---CCCcCeecCCCCcccccCCcccc
Q psy954 75 VNPCNIHNGGCAQSCHPG---PNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 75 ~npC~~~nggCs~lCl~~---~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
.+||. ||| .|+.. ..+.++|.||.||. |+.|.
T Consensus 13 ~~pC~--NGG---tC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 13 AWYCL--NDA---HCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp HHTSC--TTC---EEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred CCcCC--CCC---EEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 36887 665 34431 22348999999986 44554
No 156
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=57.96 E-value=16 Score=33.41 Aligned_cols=39 Identities=13% Similarity=0.050 Sum_probs=30.8
Q ss_pred ceEEEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEecccCC
Q psy954 7 ASMVLISATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGA 47 (337)
Q Consensus 7 ~R~vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~ 47 (337)
..++|..++.+|.+|++. .+.||.++.. +.|++++. +|.
T Consensus 20 ~~~~va~~l~~P~~ia~~pdG~l~V~e~~-g~I~~~d~-~G~ 59 (354)
T 3a9g_A 20 KISEVASDLEVPWSIAPLGGGRYLVTERP-GRLVLISP-SGK 59 (354)
T ss_dssp EEEEEECSCSCEEEEEEEETTEEEEEETT-TEEEEECS-SCE
T ss_pred EEEEEeCCCCCCeEEEEcCCCeEEEEeCC-CEEEEEeC-CCc
Confidence 345555889999999998 6789999987 88998863 554
No 157
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=57.67 E-value=3.3 Score=32.98 Aligned_cols=34 Identities=38% Similarity=0.886 Sum_probs=22.7
Q ss_pred cCCCCCcCCCCCccccccCCCCCcCeecCCCCcccccCCccccc
Q psy954 73 CSVNPCNIHNGGCAQSCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 73 ~~~npC~~~nggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
+..+||. |++ .|+..+++ ++|.|+.||. |+.|..
T Consensus 50 C~~~pC~--n~g---~C~~~~g~-y~C~C~~G~~----G~~C~~ 83 (142)
T 2c4f_L 50 CASSPCQ--NGG---SCKDQLQS-YICFCLPAFE----GRNCET 83 (142)
T ss_dssp GGGCCCC--TTC---EEEEETTE-EEEECCTTEE----STTSCE
T ss_pred CcCCCcC--CCC---EEeCCCCC-EEeeCCCCcc----CCcccc
Confidence 4456665 322 56666555 9999999996 566653
No 158
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=55.94 E-value=21 Score=34.00 Aligned_cols=45 Identities=20% Similarity=0.214 Sum_probs=35.0
Q ss_pred CCceEEEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCce
Q psy954 5 TGASMVLISATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANM 49 (337)
Q Consensus 5 G~~R~vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~ 49 (337)
|-..++|.+++.+|.+|++. .+.||.++...+.|+++...+|...
T Consensus 16 gf~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~ 61 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVK 61 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred CeEEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe
Confidence 44556667889999999997 6689999988778999976556533
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=55.76 E-value=18 Score=31.00 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=26.3
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCceEEEecccCC
Q psy954 14 ATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGA 47 (337)
Q Consensus 14 ~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~ 47 (337)
...+|.+|++. .+.||.++.....|++.+. +|.
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 152 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGN 152 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSC
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCC
Confidence 34689999997 5679999998889998885 344
No 160
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=54.69 E-value=5.1 Score=35.42 Aligned_cols=32 Identities=28% Similarity=0.554 Sum_probs=27.3
Q ss_pred CCccccccCCCCCcCeecCCCCcccccCCcccc
Q psy954 83 GGCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 83 ggCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
.+|.|.|.....+ +.|.|+.||.|..+.++|.
T Consensus 132 ~~c~~~C~n~~g~-~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 132 LSCDHYCHNYIGG-YYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCCSSEEEEETTE-EEEECCTTCEECTTSSCEE
T ss_pred ccCCcCcCCccCC-cEEEeCCcceeccCCCCCc
Confidence 3799999987655 8999999999998887775
No 161
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=54.36 E-value=18 Score=33.00 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=27.0
Q ss_pred CCceEEEEECCEEEEEeCCCCceEEEecccC
Q psy954 16 IYPFAITVHRNYIYWTDLQLRGVYRAEKHTG 46 (337)
Q Consensus 16 ~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G 46 (337)
..|.||+++++.||.+++....|+++....+
T Consensus 268 ~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 268 FPPGNLAFFRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEEEEEEE
T ss_pred CCCcceEEECCEEEEEECCCCEEEEEEECCC
Confidence 4588999999999999999999999977543
No 162
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=54.05 E-value=25 Score=30.73 Aligned_cols=41 Identities=5% Similarity=0.076 Sum_probs=30.8
Q ss_pred EEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEecccCCceE
Q psy954 10 VLISATIYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANMI 50 (337)
Q Consensus 10 vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~~ 50 (337)
.|......|.++++. .+.|||++...+.|++.+..+|....
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 334555778888886 56799999888899999887765443
No 163
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=50.87 E-value=33 Score=29.83 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=32.3
Q ss_pred EEEE-cCCCCceEEEEE--CCEEEEEeCCCCceEEEecccCCc
Q psy954 9 MVLI-SATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 9 ~vl~-~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
++|+ .....+-|++.. ++.|||+|...+.|++.+..++..
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~ 47 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV 47 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 3444 567889999988 489999999999999999876643
No 164
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=50.58 E-value=26 Score=30.85 Aligned_cols=49 Identities=22% Similarity=0.397 Sum_probs=31.8
Q ss_pred CCCceEEEEEC--CEEEEEeCCC-----------------CceEEEecccCCceEEEeecccCCCcccee
Q psy954 15 TIYPFAITVHR--NYIYWTDLQL-----------------RGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 15 ~~~Pf~Lav~~--d~IYWtDw~~-----------------~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
+..|.+|++.. +.||++|+.. +.|++++..++. ..++...+ ..|.+|.+
T Consensus 125 ~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~~~~~~~~-~~p~gia~ 192 (322)
T 2fp8_A 125 FKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-TTLLLKEL-HVPGGAEV 192 (322)
T ss_dssp CSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-EEEEEEEE-SCCCEEEE
T ss_pred ccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE-EEEeccCC-ccCcceEE
Confidence 35789999985 7999999762 467777765553 23333333 45666654
No 165
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=49.35 E-value=14 Score=33.29 Aligned_cols=50 Identities=12% Similarity=0.033 Sum_probs=34.5
Q ss_pred CCceEEEEE-CCEEEEEeCCCCceEEEecccCCceEEEeecccCCCcccee
Q psy954 16 IYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 16 ~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
.+|-||++. ++.||.++|..++|.+.+..+|....++.......|.+|.+
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 478899997 67999999999999999975564322222221245666665
No 166
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=47.01 E-value=5.7 Score=35.45 Aligned_cols=39 Identities=26% Similarity=0.598 Sum_probs=28.4
Q ss_pred CCCcCCCC---CccccccCCCCCcCeecCCCCcccccCCcccc
Q psy954 76 NPCNIHNG---GCAQSCHPGPNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 76 npC~~~ng---gCs~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
..|...++ .|+|+|.....+ +.|.|..||.|..++++|.
T Consensus 121 ~~C~~~~~~~~~c~~~C~n~~g~-~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 121 DECRTSLGDSVPCDHYCHXYLGG-YYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CTTC-------CCSSEEEEETTE-EEEECCTTEEECTTSSCEE
T ss_pred CccCCCCCCcccCCCccccccCc-eEeecCCCceeccCCCCcc
Confidence 45554333 599999987655 8999999999998877664
No 167
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=43.18 E-value=7.7 Score=38.65 Aligned_cols=35 Identities=31% Similarity=0.789 Sum_probs=23.8
Q ss_pred ccCCCCCcCCCCCccccccCCCCCcCeecCC-CCcccccCCcccc
Q psy954 72 KCSVNPCNIHNGGCAQSCHPGPNGTAECKCD-ESTKLVNEGRMCV 115 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~~~~~~~~C~Cp-~g~~L~~~~~~C~ 115 (337)
+|.++||+ ||| .|+....++++|.|+ .||. |+.|.
T Consensus 3 ~C~s~PC~--ngG---~C~~~~~~~y~C~C~~~G~~----G~~Ce 38 (587)
T 3nt1_A 3 PCCSNPCQ--NRG---ECMSTGFDQYKCDCTRTGFY----GENCT 38 (587)
T ss_dssp TTTTCCCC--TTC---EEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred CCCCCCCC--CCC---EeeCCCCCCeEEecCCCCcc----CCCCC
Confidence 46678998 655 455433345999999 9985 55665
No 168
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=42.36 E-value=26 Score=34.01 Aligned_cols=30 Identities=7% Similarity=-0.074 Sum_probs=26.7
Q ss_pred CCCceEEEEEC--CEEEEEeCCCCceEEEecc
Q psy954 15 TIYPFAITVHR--NYIYWTDLQLRGVYRAEKH 44 (337)
Q Consensus 15 ~~~Pf~Lav~~--d~IYWtDw~~~~I~r~~k~ 44 (337)
+.+|.+|+|.. +.||.+|.....|.++...
T Consensus 443 f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 443 FRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 57999999995 7999999999999988764
No 169
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=42.11 E-value=38 Score=31.20 Aligned_cols=50 Identities=12% Similarity=0.125 Sum_probs=34.8
Q ss_pred CCceEEEEECCEEEEEeCCCCceEEEecccCC---ceEEEeecccCCCcccee
Q psy954 16 IYPFAITVHRNYIYWTDLQLRGVYRAEKHTGA---NMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 16 ~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~---~~~~l~~~~~~~p~gI~v 65 (337)
.-|.||+++.+.+|-..++...|+|+....+. ..+.++.....+|.+|.+
T Consensus 263 ~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~ 315 (347)
T 3das_A 263 ASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAP 315 (347)
T ss_dssp CCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEE
T ss_pred CCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEE
Confidence 46899999999999999999999999765432 123344333345555554
No 170
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=41.83 E-value=20 Score=32.75 Aligned_cols=37 Identities=19% Similarity=0.078 Sum_probs=27.8
Q ss_pred ceEEEEcCCCCceEEEEEC--CEEEEEeCCCCceEEEec
Q psy954 7 ASMVLISATIYPFAITVHR--NYIYWTDLQLRGVYRAEK 43 (337)
Q Consensus 7 ~R~vl~~~~~~Pf~Lav~~--d~IYWtDw~~~~I~r~~k 43 (337)
..+++..++.+|++|++.. +.||.+|........++.
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~ 226 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNI 226 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEE
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEE
Confidence 4455557788999999994 799999988776444443
No 171
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=40.80 E-value=9.6 Score=37.71 Aligned_cols=34 Identities=29% Similarity=0.830 Sum_probs=23.5
Q ss_pred ccCCCCCcCCCCCccccccC-CCCCcCeecCC-CCcccccCCcccc
Q psy954 72 KCSVNPCNIHNGGCAQSCHP-GPNGTAECKCD-ESTKLVNEGRMCV 115 (337)
Q Consensus 72 ~~~~npC~~~nggCs~lCl~-~~~~~~~C~Cp-~g~~L~~~~~~C~ 115 (337)
+|.++||+ ||| .|.. ..+ +++|.|+ .||. |+.|.
T Consensus 4 ~C~~~PC~--ngG---~C~~~~~~-~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 4 PCCYYPCQ--HQG---ICVRFGLD-RYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp GGGGCCCC--TTC---EEEEETTT-EEEEECTTSSEE----TTTTC
T ss_pred cCCCCCCC--CCC---CcCCCCCC-ceEeeCCCCCcC----CCCCC
Confidence 46678998 655 4444 334 4999999 9986 55664
No 172
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=40.65 E-value=3.9 Score=27.49 Aligned_cols=30 Identities=23% Similarity=0.497 Sum_probs=19.1
Q ss_pred CCcCCCCCccccccCC---CCCcCeecCCCCcccccCCcccc
Q psy954 77 PCNIHNGGCAQSCHPG---PNGTAECKCDESTKLVNEGRMCV 115 (337)
Q Consensus 77 pC~~~nggCs~lCl~~---~~~~~~C~Cp~g~~L~~~~~~C~ 115 (337)
||. ||| .|+.. ..+.++|.||.||. |..|.
T Consensus 15 pC~--NGG---tC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 15 YCL--NDA---HCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp TSC--SSC---EEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred cCC--CCC---EEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 787 654 34421 23348999999986 55664
No 173
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=40.02 E-value=38 Score=29.02 Aligned_cols=42 Identities=10% Similarity=0.006 Sum_probs=32.9
Q ss_pred eEEEEcCCCCceEEEEE-CCEEEEE-------eCCCCceEEEecccCCce
Q psy954 8 SMVLISATIYPFAITVH-RNYIYWT-------DLQLRGVYRAEKHTGANM 49 (337)
Q Consensus 8 R~vl~~~~~~Pf~Lav~-~d~IYWt-------Dw~~~~I~r~~k~~G~~~ 49 (337)
.+.|..++..|.++++. .+.|||+ +...+.|++.+..+|...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 59 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT 59 (314)
T ss_dssp CEEEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE
T ss_pred HhhhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE
Confidence 34556788999999997 6789999 887888999887666543
No 174
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=39.43 E-value=64 Score=27.91 Aligned_cols=37 Identities=16% Similarity=0.305 Sum_probs=29.2
Q ss_pred CCceEEEEE--CCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 16 IYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 16 ~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
..|.++++. +++||+++...+.|+..+..+|.....+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 127 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRL 127 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEE
Confidence 458888887 5789999999899999988777654444
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=39.00 E-value=50 Score=28.68 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=26.3
Q ss_pred EEEcCCCCceEEEEEC--CEEEEEeCCCCceEEEecc
Q psy954 10 VLISATIYPFAITVHR--NYIYWTDLQLRGVYRAEKH 44 (337)
Q Consensus 10 vl~~~~~~Pf~Lav~~--d~IYWtDw~~~~I~r~~k~ 44 (337)
.+......|.+|++.. ++||+++...+.|++.+..
T Consensus 176 ~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 176 PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 3334456788998874 4899999888889888875
No 176
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=38.14 E-value=4.5 Score=36.46 Aligned_cols=39 Identities=28% Similarity=0.704 Sum_probs=26.7
Q ss_pred CCCcCCCCCcc--ccccCCCCCcCeecCCCCcccccCCcccccC
Q psy954 76 NPCNIHNGGCA--QSCHPGPNGTAECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 76 npC~~~nggCs--~lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
+.|....+.|. ..|+.++.+ ++|.|+.||. .+|+.|...
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gs-y~C~C~~Gy~--GnG~~C~d~ 46 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATG-FCCRCVANYT--GNGRQCVAE 46 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSC-EEEEECTTEE--ECSSSEEET
T ss_pred hhccCCCCCCCCCCEeEcCCCC-eEEEcCCCCC--CCCCcCCCC
Confidence 34443333454 368888777 9999999997 567788764
No 177
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=38.04 E-value=56 Score=28.79 Aligned_cols=38 Identities=11% Similarity=0.008 Sum_probs=32.5
Q ss_pred CCceEEEEECCEEEEEeCCCCceEEEecccCCceEEEe
Q psy954 16 IYPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMV 53 (337)
Q Consensus 16 ~~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~ 53 (337)
.+|.+|...+++||-+.|.+..|.+++..+|+-...+.
T Consensus 152 ~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 152 IRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp CCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred ccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 36788998899999999999999999999998665554
No 178
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=36.06 E-value=10 Score=30.39 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=18.0
Q ss_pred cccCCCCCcCeecCCCCcccccCCccccc
Q psy954 88 SCHPGPNGTAECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 88 lCl~~~~~~~~C~Cp~g~~L~~~~~~C~~ 116 (337)
.|+...++ ++|.|+.||. |..|..
T Consensus 132 ~C~~~~~~-~~c~C~~g~~----G~~Ce~ 155 (162)
T 1g1s_A 132 ECLETIGN-YTCSCYPGFY----GPECEY 155 (162)
T ss_dssp EEEECSSS-EEEEECTTEE----STTSCE
T ss_pred EEecCCCC-ceEeCCCCCc----Cccccc
Confidence 57776666 9999999997 445654
No 179
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=35.74 E-value=60 Score=27.70 Aligned_cols=37 Identities=5% Similarity=-0.051 Sum_probs=28.5
Q ss_pred CCceEEEEE-CCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 16 IYPFAITVH-RNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 16 ~~Pf~Lav~-~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
..|.+|++. .+.||.+++..+.|.+.+..+|.....+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEE
Confidence 568999887 5788889988889999988766544444
No 180
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=33.81 E-value=66 Score=28.37 Aligned_cols=39 Identities=15% Similarity=0.183 Sum_probs=30.2
Q ss_pred EEEEc-CCCCceEEEEEC--CEEEEEeCCCCceEEEecccCC
Q psy954 9 MVLIS-ATIYPFAITVHR--NYIYWTDLQLRGVYRAEKHTGA 47 (337)
Q Consensus 9 ~vl~~-~~~~Pf~Lav~~--d~IYWtDw~~~~I~r~~k~~G~ 47 (337)
++|+. ....+-++++.. +.|||+|...+.|++.+..+|.
T Consensus 41 ~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~ 82 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGR 82 (326)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE
T ss_pred EEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 34443 456788998884 7999999999999999887654
No 181
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=31.82 E-value=1.7e+02 Score=24.86 Aligned_cols=34 Identities=6% Similarity=-0.035 Sum_probs=27.3
Q ss_pred CCCCceEEEEE--CCEEEEEeCCCCceEEEecccCCc
Q psy954 14 ATIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 14 ~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
....| +|++. +++||.+......|+.++..++..
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce
Confidence 34566 88886 668999999888999999888765
No 182
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=31.75 E-value=19 Score=25.55 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=16.5
Q ss_pred CeecCCCCcccccCCcccccC
Q psy954 97 AECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 97 ~~C~Cp~g~~L~~~~~~C~~~ 117 (337)
.-|.|+.||++..+...|++.
T Consensus 47 ~GC~C~~G~vr~~~~g~CV~~ 67 (78)
T 2p3f_N 47 PACVCKDGFYRDTVIGDCVRE 67 (78)
T ss_dssp CEEEECSSCEEETTTTEEECG
T ss_pred CCcCcCCCEeEcCCCCceECH
Confidence 359999999998764568874
No 183
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=30.92 E-value=64 Score=29.23 Aligned_cols=31 Identities=6% Similarity=0.001 Sum_probs=26.4
Q ss_pred CCceEEEEE--------CCEEEEEeCCCCceEEEecccC
Q psy954 16 IYPFAITVH--------RNYIYWTDLQLRGVYRAEKHTG 46 (337)
Q Consensus 16 ~~Pf~Lav~--------~d~IYWtDw~~~~I~r~~k~~G 46 (337)
.-|.+|+++ .+.||.+++....|+++....+
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 468999997 5899999999999999987654
No 184
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=29.92 E-value=39 Score=30.70 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=26.3
Q ss_pred ceEEEEcCCCCceEEEEE--CCEEEEEeCCCCceEEEe
Q psy954 7 ASMVLISATIYPFAITVH--RNYIYWTDLQLRGVYRAE 42 (337)
Q Consensus 7 ~R~vl~~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~ 42 (337)
..+++..++.+|++|++. .+.||.+|........++
T Consensus 188 ~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~ 225 (353)
T 2g8s_A 188 RAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEIN 225 (353)
T ss_dssp CTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEE
T ss_pred CccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEe
Confidence 455555778899999999 579999998765433443
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=29.26 E-value=1.2e+02 Score=27.63 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=34.7
Q ss_pred CCceEEEEE--CC-EEEEEeCCCCceEEEecccCCceEEEeecccCCCccceee
Q psy954 16 IYPFAITVH--RN-YIYWTDLQLRGVYRAEKHTGANMIEMVKRLEDSPRDIHVY 66 (337)
Q Consensus 16 ~~Pf~Lav~--~d-~IYWtDw~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v~ 66 (337)
..|.+|++. +. .||-+.|..+.|..++..+++....+. .....|.+|.++
T Consensus 318 ~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~-~vG~~P~~~~~~ 370 (373)
T 2mad_H 318 HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV-ELGSGPQVLSVM 370 (373)
T ss_pred CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeec-CCCCCCcEEEEc
Confidence 469999998 45 667667789999999988876555432 122457766654
No 186
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=28.80 E-value=72 Score=28.11 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=25.4
Q ss_pred cCCCCceEEEEE--CCEEEEEeCCCCceEEEecc
Q psy954 13 SATIYPFAITVH--RNYIYWTDLQLRGVYRAEKH 44 (337)
Q Consensus 13 ~~~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~ 44 (337)
.....|.+|++. +++|||++...+.|++.+..
T Consensus 176 ~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 176 ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 445678889887 55899999988899988864
No 187
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=28.77 E-value=23 Score=26.57 Aligned_cols=31 Identities=29% Similarity=0.808 Sum_probs=24.6
Q ss_pred CCCcCCCCCcc--ccccCCCC----CcCeecCCCCcc
Q psy954 76 NPCNIHNGGCA--QSCHPGPN----GTAECKCDESTK 106 (337)
Q Consensus 76 npC~~~nggCs--~lCl~~~~----~~~~C~Cp~g~~ 106 (337)
++|+.+||||. -.|..... +..+|.|..|+.
T Consensus 47 ~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 47 PTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 79999999996 47887743 458899999974
No 188
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=26.25 E-value=21 Score=20.86 Aligned_cols=19 Identities=21% Similarity=0.653 Sum_probs=14.3
Q ss_pred eecCCCCcccccCCcccccC
Q psy954 98 ECKCDESTKLVNEGRMCVAK 117 (337)
Q Consensus 98 ~C~Cp~g~~L~~~~~~C~~~ 117 (337)
-|.|+.||++...| .|++.
T Consensus 6 GC~C~~G~vrn~~G-~CV~~ 24 (32)
T 3ssb_I 6 KCYCEDGYARDVNG-KCIPI 24 (32)
T ss_dssp EEEECTTEEECTTS-CEEEG
T ss_pred CCCcCCCcEECCCC-CEECH
Confidence 49999999987654 57653
No 189
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=26.24 E-value=20 Score=23.53 Aligned_cols=18 Identities=33% Similarity=0.665 Sum_probs=13.8
Q ss_pred eecCCCCcccccCCccccc
Q psy954 98 ECKCDESTKLVNEGRMCVA 116 (337)
Q Consensus 98 ~C~Cp~g~~L~~~~~~C~~ 116 (337)
-|.||.||+|..+ ..|++
T Consensus 35 GC~C~~G~v~~~~-g~CV~ 52 (56)
T 1ccv_A 35 GCQCQEGFLRNGE-GACVL 52 (56)
T ss_dssp EEEECTTCEEETT-TEEEC
T ss_pred CCcCCCCeeECCC-CcccC
Confidence 3999999999764 35665
No 190
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=26.14 E-value=24 Score=27.45 Aligned_cols=19 Identities=16% Similarity=0.274 Sum_probs=14.2
Q ss_pred cccCCCCCcCeecCCCCccc
Q psy954 88 SCHPGPNGTAECKCDESTKL 107 (337)
Q Consensus 88 lCl~~~~~~~~C~Cp~g~~L 107 (337)
.|+....+ ++|.|+.||+-
T Consensus 110 ~C~~~~g~-~~C~C~~G~~G 128 (143)
T 4d90_A 110 ICTDLVAN-YSCECPGEFMG 128 (143)
T ss_dssp EEEEETTE-EEEECCTTCBS
T ss_pred EeECCCCC-eEeECCCCCcc
Confidence 66665544 89999999963
No 191
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=25.69 E-value=1.8e+02 Score=24.57 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=33.1
Q ss_pred CCceEEEEE--CCEEEEEeCCCCceE--EEecccCCceEEEeecccCCCccceeeccC
Q psy954 16 IYPFAITVH--RNYIYWTDLQLRGVY--RAEKHTGANMIEMVKRLEDSPRDIHVYSAD 69 (337)
Q Consensus 16 ~~Pf~Lav~--~d~IYWtDw~~~~I~--r~~k~~G~~~~~l~~~~~~~p~gI~v~~~~ 69 (337)
..|.+|++. +.+||.+....+.|. .++..+|....+........|..|.+....
T Consensus 277 ~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 277 TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC
T ss_pred CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEccc
Confidence 448888887 778999987666544 456656643333222223568888776443
No 192
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=25.63 E-value=83 Score=27.13 Aligned_cols=37 Identities=19% Similarity=0.096 Sum_probs=26.9
Q ss_pred CCceEEEEE--CCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 16 IYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 16 ~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
..|.++++. +++||.+++..+.|..++..++.....+
T Consensus 272 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 272 PESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp SSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 456777776 6689999988888888887776544333
No 193
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=25.56 E-value=90 Score=27.49 Aligned_cols=34 Identities=15% Similarity=0.053 Sum_probs=28.9
Q ss_pred EEEEECCEEEEEeCCCCceEEEecccCCceEEEe
Q psy954 20 AITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMV 53 (337)
Q Consensus 20 ~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~ 53 (337)
.|...++.||-..|.+..|.+++..+|.-...+-
T Consensus 176 ELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 176 ELEWVDGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp EEEEETTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred eeEEECCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 4777799999999999999999999997655554
No 194
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=23.29 E-value=2.8e+02 Score=23.44 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=27.5
Q ss_pred CCCceEEEEE--CCEEEEEeCCCCceEEEecccCCc
Q psy954 15 TIYPFAITVH--RNYIYWTDLQLRGVYRAEKHTGAN 48 (337)
Q Consensus 15 ~~~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~ 48 (337)
...|.+|++. +.+||.+.+..+.|...+..++..
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 4568889887 568999999888898888777765
No 195
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=22.94 E-value=58 Score=30.91 Aligned_cols=36 Identities=6% Similarity=0.003 Sum_probs=26.2
Q ss_pred ceEEEEcCCCCceEEEEE-CCEEEEEeCCCCceEEEe
Q psy954 7 ASMVLISATIYPFAITVH-RNYIYWTDLQLRGVYRAE 42 (337)
Q Consensus 7 ~R~vl~~~~~~Pf~Lav~-~d~IYWtDw~~~~I~r~~ 42 (337)
..+++..++.+|++|++. .+.||.+|.....-..++
T Consensus 219 ~~ei~a~G~RNp~gla~dp~G~L~~~d~g~~~~dein 255 (454)
T 1cru_A 219 VSHIYTLGHRNPQGLAFTPNGKLLQSEQGPNSDDEIN 255 (454)
T ss_dssp ECSEEEBCCSEEEEEEECTTSCEEEEEECSSSCEEEE
T ss_pred cceEEEECCCCcceEEECCCCCEEEEecCCCCCeEEE
Confidence 455555788999999998 578999997665433333
No 196
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=22.72 E-value=2.3e+02 Score=23.84 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=28.1
Q ss_pred CceEEEEE--CCEEEEEeCCCCceEEEecccCCceEEE
Q psy954 17 YPFAITVH--RNYIYWTDLQLRGVYRAEKHTGANMIEM 52 (337)
Q Consensus 17 ~Pf~Lav~--~d~IYWtDw~~~~I~r~~k~~G~~~~~l 52 (337)
.|.+|++. +++||.+....+.|+..+..+|.....+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 72 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI 72 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeE
Confidence 58889887 5589999988888999988777644433
No 197
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=22.66 E-value=56 Score=30.16 Aligned_cols=48 Identities=8% Similarity=-0.020 Sum_probs=34.9
Q ss_pred CCceEEEEE--CCEEEEEeC-CCCceEEEecccCCceEEEeecccCCCcccee
Q psy954 16 IYPFAITVH--RNYIYWTDL-QLRGVYRAEKHTGANMIEMVKRLEDSPRDIHV 65 (337)
Q Consensus 16 ~~Pf~Lav~--~d~IYWtDw-~~~~I~r~~k~~G~~~~~l~~~~~~~p~gI~v 65 (337)
.+|.+|++. +.+||.+-+ ..+.|..++..+++....+... ..|.+|.+
T Consensus 314 ~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg--~~P~~i~~ 364 (368)
T 1mda_H 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD--KGPESLSV 364 (368)
T ss_dssp EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC--SCCCEEEC
T ss_pred CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC--CCCCEEEe
Confidence 379999998 457999988 7999999998887644444322 45666655
No 198
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=20.89 E-value=1.6e+02 Score=26.05 Aligned_cols=37 Identities=14% Similarity=0.053 Sum_probs=29.7
Q ss_pred CceEEEEECCEEEEEeCCCCceEEEecccCCceEEEe
Q psy954 17 YPFAITVHRNYIYWTDLQLRGVYRAEKHTGANMIEMV 53 (337)
Q Consensus 17 ~Pf~Lav~~d~IYWtDw~~~~I~r~~k~~G~~~~~l~ 53 (337)
++-.|...+++||-..|.+..|.+++..+|+-...+-
T Consensus 182 ~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 182 LINELECANGVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp CEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 3345666789999999999999999999997655554
No 199
>1ata_A Ascaris trypsin inhibitor; proteinase inhibitor(trypsin); NMR {Ascaris suum} SCOP: g.22.1.1 PDB: 1atb_A 1atd_A 1ate_A
Probab=20.62 E-value=52 Score=22.12 Aligned_cols=29 Identities=24% Similarity=0.665 Sum_probs=19.0
Q ss_pred CCccccccCCCCCcCeecCC--CCcccccCCcccccC
Q psy954 83 GGCAQSCHPGPNGTAECKCD--ESTKLVNEGRMCVAK 117 (337)
Q Consensus 83 ggCs~lCl~~~~~~~~C~Cp--~g~~L~~~~~~C~~~ 117 (337)
..|...|++ ..|.|+ .||++..+| .|++.
T Consensus 27 ~~C~~~C~~-----~gC~C~~~~G~vr~~~g-~CV~~ 57 (62)
T 1ata_A 27 VPCTRECKP-----PRCECIASAGFVRDAQG-NCIKF 57 (62)
T ss_dssp CCCSCCCCC-----SEEECCTTTTEEEETTT-EEEES
T ss_pred CCCcCccCC-----CCcCcCCCCCeEECCCC-CEECH
Confidence 345555541 259999 999997654 57764
Done!