Query         psy9540
Match_columns 214
No_of_seqs    126 out of 1647
Neff          9.4 
Searched_HMMs 46136
Date          Fri Aug 16 22:13:19 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy9540.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9540hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0158|consensus              100.0   2E-48 4.4E-53  331.9  18.5  189    7-197   263-470 (499)
  2 KOG0156|consensus              100.0 1.1E-47 2.4E-52  330.2  18.3  185   11-198   264-463 (489)
  3 PLN02500 cytochrome P450 90B1  100.0 7.3E-46 1.6E-50  322.3  19.8  191   10-200   262-469 (490)
  4 PLN02971 tryptophan N-hydroxyl 100.0   9E-46   2E-50  325.2  20.3  198   10-210   304-518 (543)
  5 PLN02183 ferulate 5-hydroxylas 100.0   5E-45 1.1E-49  318.9  20.0  188   10-199   271-483 (516)
  6 PLN03234 cytochrome P450 83B1; 100.0 5.8E-45 1.2E-49  317.3  19.4  201    9-211   263-483 (499)
  7 PF00067 p450:  Cytochrome P450 100.0 2.5E-45 5.4E-50  312.9  16.0  193    8-202   236-444 (463)
  8 PLN02966 cytochrome P450 83A1  100.0 6.7E-45 1.4E-49  317.2  18.8  202   10-211   265-484 (502)
  9 PLN02394 trans-cinnamate 4-mon 100.0 1.5E-44 3.2E-49  315.1  20.0  189   10-200   273-475 (503)
 10 PLN02169 fatty acid (omega-1)- 100.0   3E-44 6.4E-49  312.8  19.6  182   10-199   276-476 (500)
 11 PTZ00404 cytochrome P450; Prov 100.0 2.6E-44 5.6E-49  312.0  18.6  185   10-200   262-459 (482)
 12 PLN02774 brassinosteroid-6-oxi 100.0 5.5E-44 1.2E-48  308.6  20.2  190    9-200   242-443 (463)
 13 KOG0157|consensus              100.0   3E-44 6.6E-49  312.0  18.1  192    8-200   270-473 (497)
 14 PLN02738 carotene beta-ring hy 100.0 1.1E-43 2.4E-48  315.4  20.4  188    9-199   372-570 (633)
 15 PLN00168 Cytochrome P450; Prov 100.0   1E-43 2.2E-48  310.8  19.8  190   10-200   282-492 (519)
 16 PLN02426 cytochrome P450, fami 100.0 1.5E-43 3.2E-48  308.4  20.0  188    9-198   276-473 (502)
 17 PLN02290 cytokinin trans-hydro 100.0 1.4E-43   3E-48  309.9  18.7  185    9-198   290-490 (516)
 18 PLN02655 ent-kaurene oxidase   100.0 2.3E-43 4.9E-48  305.0  19.5  188   10-200   244-440 (466)
 19 PLN00110 flavonoid 3',5'-hydro 100.0 2.4E-43 5.2E-48  307.4  19.7  188   10-199   266-471 (504)
 20 PLN03195 fatty acid omega-hydr 100.0 1.2E-43 2.5E-48  310.3  17.4  191    9-199   269-492 (516)
 21 KOG0159|consensus              100.0 1.2E-43 2.5E-48  298.4  16.4  189   11-200   300-495 (519)
 22 PLN02687 flavonoid 3'-monooxyg 100.0 4.1E-43 8.9E-48  306.9  19.7  189    9-199   269-480 (517)
 23 PLN03018 homomethionine N-hydr 100.0   8E-43 1.7E-47  305.6  20.8  188   10-199   291-498 (534)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 4.3E-43 9.4E-48  302.2  18.8  187   10-199   232-429 (452)
 25 PLN03112 cytochrome P450 famil 100.0 6.7E-43 1.5E-47  305.4  19.1  189    9-199   272-479 (514)
 26 PLN02196 abscisic acid 8'-hydr 100.0 2.5E-42 5.4E-47  298.3  18.9  187    9-199   245-440 (463)
 27 PLN02987 Cytochrome P450, fami 100.0 1.7E-41 3.6E-46  293.5  20.4  192    9-200   248-448 (472)
 28 PLN02302 ent-kaurenoic acid ox 100.0 1.8E-41 3.9E-46  294.6  19.4  187    9-198   264-464 (490)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.9E-41 4.1E-46  294.6  18.3  188   10-200   260-459 (489)
 30 KOG0684|consensus              100.0 4.6E-40 9.9E-45  271.5  14.8  188   10-198   252-459 (486)
 31 COG2124 CypX Cytochrome P450 [ 100.0 2.3E-37   5E-42  263.4  12.2  165    7-198   211-387 (411)
 32 PLN02648 allene oxide synthase 100.0 6.9E-36 1.5E-40  258.1  17.6  175   23-200   267-464 (480)
 33 PF09201 SRX:  SRX;  InterPro:   61.4     6.8 0.00015   28.2   2.0   23  168-190    18-40  (148)
 34 PF12444 Sox_N:  Sox developmen  45.6      15 0.00032   24.1   1.6   21  178-198    60-80  (84)
 35 PF08492 SRP72:  SRP72 RNA-bind  42.6      20 0.00043   21.9   1.6    8  143-150    44-51  (59)
 36 PF12508 DUF3714:  Protein of u  38.4      35 0.00075   26.4   2.9   43   81-124    52-94  (200)
 37 KOG3506|consensus               27.5      28 0.00061   20.7   0.6   11  161-171    12-22  (56)
 38 PF14550 Peptidase_U35_2:  Puta  23.4      55  0.0012   23.2   1.5   21  104-124    72-92  (122)
 39 KOG1429|consensus               21.5 1.1E+02  0.0024   25.3   3.1   16  183-198   216-231 (350)

No 1  
>KOG0158|consensus
Probab=100.00  E-value=2e-48  Score=331.95  Aligned_cols=189  Identities=26%  Similarity=0.513  Sum_probs=177.1

Q ss_pred             CCCCccchhhhhcCC-----------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCC
Q psy9540           7 NKCHHESCGYIIKGG-----------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDD   68 (214)
Q Consensus         7 ~~~~~~~~~~ll~~~-----------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~   68 (214)
                      ...+.|+++.+++..           ..+.++++++++.+++||+||||++|++++    +||   +|+++||++++.. 
T Consensus       263 ~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~-  341 (499)
T KOG0158|consen  263 NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEE-  341 (499)
T ss_pred             CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcc-
Confidence            467889999999764           255689999999999999999999999988    999   9999999999765 


Q ss_pred             CCCCCCHHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceeeC-CeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCC
Q psy9540          69 KERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIG-DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRF  147 (214)
Q Consensus        69 ~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rf  147 (214)
                       ...++++.+.+|+||++||+|+||+||+.+...|.+++|++++ ++.|++|+.|.++.+++||||++||||++|+||||
T Consensus       342 -~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF  420 (499)
T KOG0158|consen  342 -KEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERF  420 (499)
T ss_pred             -cCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccC
Confidence             2229999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCC
Q psy9540         148 LPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSP  197 (214)
Q Consensus       148 l~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~  197 (214)
                      .+++....++..|+|||.|||+|+|.+||++|+|+.|++||++|++++.+
T Consensus       421 ~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~  470 (499)
T KOG0158|consen  421 EEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP  470 (499)
T ss_pred             CCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC
Confidence            98887777889999999999999999999999999999999999999999


No 2  
>KOG0156|consensus
Probab=100.00  E-value=1.1e-47  Score=330.20  Aligned_cols=185  Identities=28%  Similarity=0.490  Sum_probs=172.9

Q ss_pred             ccchhhhhcCCC------CchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHh
Q psy9540          11 HESCGYIIKGGV------NKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEE   77 (214)
Q Consensus        11 ~~~~~~ll~~~~------~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~   77 (214)
                      .|+++.+++...      .+++++...+..+++||+|||++++.|++    +||   +|+++||+.++|.  +..++.+|
T Consensus       264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~--~r~v~e~D  341 (489)
T KOG0156|consen  264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGK--GRLVSESD  341 (489)
T ss_pred             CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCChhh
Confidence            799999986522      46678999999999999999999999999    999   9999999999998  45599999


Q ss_pred             hcCCHHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCC-CCCC
Q psy9540          78 LQNMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEK-FGKY  155 (214)
Q Consensus        78 ~~~~~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~-~~~~  155 (214)
                      +.++||++|+|+|++|+||+.|.. +|.+++|+.++||.||+||.|+++.|++||||++|+||++|+||||++++ ... 
T Consensus       342 ~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~~-  420 (489)
T KOG0156|consen  342 LPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGKG-  420 (489)
T ss_pred             hccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCccccC-
Confidence            999999999999999999999974 89999999999999999999999999999999999999999999999985 444 


Q ss_pred             CCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCC
Q psy9540         156 PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       156 ~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  198 (214)
                      ....++|||.|+|+|+|..+|++++.+++|.||++|+|+++++
T Consensus       421 ~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  421 LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            7788999999999999999999999999999999999999988


No 3  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.3e-46  Score=322.34  Aligned_cols=191  Identities=21%  Similarity=0.360  Sum_probs=172.3

Q ss_pred             CccchhhhhcCCCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCC---CCCCCCCHHhhc
Q psy9540          10 HHESCGYIIKGGVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGD---DKERCPTFEELQ   79 (214)
Q Consensus        10 ~~~~~~~ll~~~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~---~~~~~~~~~~~~   79 (214)
                      ..|+++.+++....+++++++++..+++||+|||+++++|++    +||   +|+++|++++.+.   .+...+++++++
T Consensus       262 ~~d~l~~ll~~~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~  341 (490)
T PLN02500        262 EDDLLGWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYK  341 (490)
T ss_pred             cchHHHHHHhccCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhc
Confidence            468999999876677889999999999999999999999998    999   9999999998742   113457999999


Q ss_pred             CCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCC-----
Q psy9540          80 NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK-----  154 (214)
Q Consensus        80 ~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~-----  154 (214)
                      ++||++|+|+|++|++|+++.+.|.+.+|++++||.||||+.|+++.|++||||++|+||++|+|+||++++...     
T Consensus       342 ~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~  421 (490)
T PLN02500        342 KMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGS  421 (490)
T ss_pred             cCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccc
Confidence            999999999999999999998899999999999999999999999999999999999999999999999754321     


Q ss_pred             --CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         155 --YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       155 --~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                        ..+..|+|||.|+|+|+|++||++|++++++.|+++|+|++.++..
T Consensus       422 ~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~  469 (490)
T PLN02500        422 SSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ  469 (490)
T ss_pred             cCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc
Confidence              1456899999999999999999999999999999999999987643


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9e-46  Score=325.23  Aligned_cols=198  Identities=18%  Similarity=0.332  Sum_probs=174.6

Q ss_pred             CccchhhhhcCC------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHH
Q psy9540          10 HHESCGYIIKGG------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFE   76 (214)
Q Consensus        10 ~~~~~~~ll~~~------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~   76 (214)
                      ..|+++.+++..      ..+++++.+++..+++||+|||+++++|++    .||   +|+++||+++++.  +..++++
T Consensus       304 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~--~~~~t~~  381 (543)
T PLN02971        304 IEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK--ERFVQES  381 (543)
T ss_pred             CcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHH
Confidence            468999999631      245689999999999999999999999998    999   9999999999986  5678999


Q ss_pred             hhcCCHHHHHHHHhhhcCCCCCCC-cceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCC--
Q psy9540          77 ELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG--  153 (214)
Q Consensus        77 ~~~~~~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~--  153 (214)
                      +++++||++|+|+|++|++|+++. ++|.+.+|+.++||.||||+.|+++.|++||||++|+||++|+||||+++...  
T Consensus       382 d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~  461 (543)
T PLN02971        382 DIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVT  461 (543)
T ss_pred             HhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCcccc
Confidence            999999999999999999999987 68999999999999999999999999999999999999999999999975432  


Q ss_pred             -CCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCCCccccceeee
Q psy9540         154 -KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMR  210 (214)
Q Consensus       154 -~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  210 (214)
                       ...+..|+|||.|+|+|+|++||++|+++++|.||++|+|++.++.+. .++.+.++
T Consensus       462 ~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~  518 (543)
T PLN02971        462 LTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETR-VELMESSH  518 (543)
T ss_pred             ccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCC-cchhhhcC
Confidence             124568999999999999999999999999999999999999875432 34444333


No 5  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5e-45  Score=318.90  Aligned_cols=188  Identities=21%  Similarity=0.387  Sum_probs=169.9

Q ss_pred             CccchhhhhcC----------------CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhC
Q psy9540          10 HHESCGYIIKG----------------GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFG   66 (214)
Q Consensus        10 ~~~~~~~ll~~----------------~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~   66 (214)
                      ..|+++.+++.                ...+++++.+++..+++||+|||+++++|++    +||   +|+++|++++++
T Consensus       271 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~  350 (516)
T PLN02183        271 ETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG  350 (516)
T ss_pred             cccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence            46888888862                1245678999999999999999999999999    999   999999999998


Q ss_pred             CCCCCCCCHHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCC
Q psy9540          67 DDKERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDR  146 (214)
Q Consensus        67 ~~~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R  146 (214)
                      .  ...+++++++++||++|+|+|++|++|+++...|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|+|
T Consensus       351 ~--~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeR  428 (516)
T PLN02183        351 L--NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSR  428 (516)
T ss_pred             C--CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchh
Confidence            5  45689999999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC--CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         147 FLPEKFGK--YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       147 fl~~~~~~--~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      |++++...  .....|+|||.|+|+|+|++||++|+++++|.|+++|+|++.++.
T Consensus       429 fl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~  483 (516)
T PLN02183        429 FLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGM  483 (516)
T ss_pred             hCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCC
Confidence            99755422  244689999999999999999999999999999999999998764


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5.8e-45  Score=317.34  Aligned_cols=201  Identities=24%  Similarity=0.363  Sum_probs=174.4

Q ss_pred             CCccchhhhhcCC-------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCC
Q psy9540           9 CHHESCGYIIKGG-------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPT   74 (214)
Q Consensus         9 ~~~~~~~~ll~~~-------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~   74 (214)
                      ...|+++.+++..       ..+++++.+++..+++||+|||+++++|++    +||   +++++|+++++++  ...++
T Consensus       263 ~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~--~~~~~  340 (499)
T PLN03234        263 ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD--KGYVS  340 (499)
T ss_pred             CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCC
Confidence            3468888777431       246789999999999999999999999998    999   9999999999876  56689


Q ss_pred             HHhhcCCHHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCC-CCCCCccCCCCCCCCC
Q psy9540          75 FEELQNMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKF  152 (214)
Q Consensus        75 ~~~~~~~~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~  152 (214)
                      +++++++||++|+|+|++|++|+++.. .|.+.+|+.++|+.||+|+.|.++.+++||||++| +||++|+|+||+++..
T Consensus       341 ~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~  420 (499)
T PLN03234        341 EEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHK  420 (499)
T ss_pred             HHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCC
Confidence            999999999999999999999999985 79999999999999999999999999999999999 8999999999997643


Q ss_pred             C---CCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC-CCccccceeeee
Q psy9540         153 G---KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY-KTIDDLKYEMRV  211 (214)
Q Consensus       153 ~---~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~  211 (214)
                      .   ...+..++|||.|+|+|+|+++|++|+++++|.|+++|+|+++++. +.........++
T Consensus       421 ~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  483 (499)
T PLN03234        421 GVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGL  483 (499)
T ss_pred             CcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccc
Confidence            2   1245689999999999999999999999999999999999999863 233344444444


No 7  
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.5e-45  Score=312.86  Aligned_cols=193  Identities=32%  Similarity=0.603  Sum_probs=173.6

Q ss_pred             CCCccchhhhhcCC-------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCC
Q psy9540           8 KCHHESCGYIIKGG-------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCP   73 (214)
Q Consensus         8 ~~~~~~~~~ll~~~-------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~   73 (214)
                      ....++++.+++..       ..+++++..++..+++||++||+.+++|++    +||   +++++|++++.+.  ...+
T Consensus       236 ~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~  313 (463)
T PF00067_consen  236 ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD--GREI  313 (463)
T ss_dssp             SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT--SSSH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc
Confidence            45678888888753       456789999999999999999999999999    999   9999999999965  4578


Q ss_pred             CHHhhcCCHHHHHHHHhhhcCCCCCC-CcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCC
Q psy9540          74 TFEELQNMPVLDRCIKEVLRMYPPGY-IIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF  152 (214)
Q Consensus        74 ~~~~~~~~~~l~a~i~E~lRl~p~~~-~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~  152 (214)
                      +.++++++|||+|+|+|++|++|+++ .++|.+.+|++++|+.||+|+.|+++.+++|+||++|+||++|+|+||++.+.
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999 67899999999999999999999999999999999999999999999999876


Q ss_pred             -CCCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCCCc
Q psy9540         153 -GKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTI  202 (214)
Q Consensus       153 -~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~~  202 (214)
                       .......++|||.|+|.|+|++||++|+++++|.+|++|+|++.++.+..
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~  444 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPE  444 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGG
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCC
Confidence             33577889999999999999999999999999999999999998765543


No 8  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=6.7e-45  Score=317.17  Aligned_cols=202  Identities=21%  Similarity=0.345  Sum_probs=174.0

Q ss_pred             CccchhhhhcC-------CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCH
Q psy9540          10 HHESCGYIIKG-------GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTF   75 (214)
Q Consensus        10 ~~~~~~~ll~~-------~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~   75 (214)
                      ..++++.+++.       ...+++++.+++..+++||+|||+++++|++    +||   +++++|++++++.+....+++
T Consensus       265 ~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~  344 (502)
T PLN02966        265 TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTE  344 (502)
T ss_pred             cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCH
Confidence            46788888842       1245679999999999999999999999988    999   999999999987522345799


Q ss_pred             HhhcCCHHHHHHHHhhhcCCCCCCC-cceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCC-CCCCCccCCCCCCCCCC
Q psy9540          76 EELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFG  153 (214)
Q Consensus        76 ~~~~~~~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~  153 (214)
                      ++++++||++|+|+|++|++|+++. +.|.+.+|+.++|+.||+|+.|.+++|++||||++| |||++|+|+||++++..
T Consensus       345 ~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~  424 (502)
T PLN02966        345 DDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD  424 (502)
T ss_pred             hhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC
Confidence            9999999999999999999999997 489999999999999999999999999999999999 99999999999975432


Q ss_pred             C-CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCCC-ccccceeeee
Q psy9540         154 K-YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKT-IDDLKYEMRV  211 (214)
Q Consensus       154 ~-~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~  211 (214)
                      . ..+..++|||.|+|+|+|++||++|+++++|.||++|+|++.++.+. ..++++..++
T Consensus       425 ~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~  484 (502)
T PLN02966        425 FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGL  484 (502)
T ss_pred             cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCe
Confidence            1 24568999999999999999999999999999999999999886432 3444444443


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.5e-44  Score=315.09  Aligned_cols=189  Identities=24%  Similarity=0.471  Sum_probs=169.4

Q ss_pred             CccchhhhhcC---CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhhc
Q psy9540          10 HHESCGYIIKG---GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEELQ   79 (214)
Q Consensus        10 ~~~~~~~ll~~---~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~~   79 (214)
                      ..|+++.+++.   +..+++++...+..+++||+||||.+++|++    +||   +++++|++++++.  +..+++++++
T Consensus       273 ~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~--~~~~~~~~l~  350 (503)
T PLN02394        273 LKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP--GNQVTEPDTH  350 (503)
T ss_pred             hhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC--CCCCCHhHHh
Confidence            46888988864   3345678888899999999999999999998    999   9999999999986  4567899999


Q ss_pred             CCHHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCC---CC
Q psy9540          80 NMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG---KY  155 (214)
Q Consensus        80 ~~~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~---~~  155 (214)
                      ++||++|||+|++|++|+++.. .|.+.+|+.++||.||+|+.|.++.+++||||++|+||++|+||||++++..   ..
T Consensus       351 ~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~  430 (503)
T PLN02394        351 KLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANG  430 (503)
T ss_pred             hCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccC
Confidence            9999999999999999999886 6888999999999999999999999999999999999999999999975432   12


Q ss_pred             CCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         156 PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       156 ~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      ....++|||.|+|+|+|++||++|+++++|.++++|+|++.++.+
T Consensus       431 ~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~  475 (503)
T PLN02394        431 NDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS  475 (503)
T ss_pred             CCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC
Confidence            356799999999999999999999999999999999999987753


No 10 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3e-44  Score=312.78  Aligned_cols=182  Identities=23%  Similarity=0.444  Sum_probs=161.7

Q ss_pred             CccchhhhhcCCC--------CchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCC
Q psy9540          10 HHESCGYIIKGGV--------NKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPT   74 (214)
Q Consensus        10 ~~~~~~~ll~~~~--------~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~   74 (214)
                      ..|+++.+++...        .+++++.+++..+++||+|||+++++|++    +||   +|+++|+++++        +
T Consensus       276 ~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~--------~  347 (500)
T PLN02169        276 SKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF--------D  347 (500)
T ss_pred             CcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC--------C
Confidence            4688888886421        34568999999999999999999999999    999   99999999874        4


Q ss_pred             HHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceee-CCeeeCCCCEEEEchhHhhcCCCCC-CCCCCccCCCCCCCCC
Q psy9540          75 FEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKF  152 (214)
Q Consensus        75 ~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~  152 (214)
                      ++++.++||++|+++|++|++|++|...|.+.+|..+ +|+.||+|+.|.+++|++||||++| +||++|+|+||+++++
T Consensus       348 ~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~  427 (500)
T PLN02169        348 NEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNG  427 (500)
T ss_pred             HHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCC
Confidence            6899999999999999999999999988877776554 8999999999999999999999999 8999999999997654


Q ss_pred             CCC--CCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         153 GKY--PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       153 ~~~--~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      ...  .+..|+|||+|+|+|+|++||++|++++++.||++|+|+++++.
T Consensus       428 ~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~  476 (500)
T PLN02169        428 GLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH  476 (500)
T ss_pred             CccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC
Confidence            332  36789999999999999999999999999999999999998654


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.6e-44  Score=312.04  Aligned_cols=185  Identities=25%  Similarity=0.415  Sum_probs=166.7

Q ss_pred             CccchhhhhcCC-CCchh---hHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhh
Q psy9540          10 HHESCGYIIKGG-VNKSY---ILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEEL   78 (214)
Q Consensus        10 ~~~~~~~ll~~~-~~~~~---~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~   78 (214)
                      ..|+++.+++.. ..+++   ++++++..+++||+|||+++++|++    +||   +++++|+++++++  ...++++++
T Consensus       262 ~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~--~~~~~~~~l  339 (482)
T PTZ00404        262 PRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG--RNKVLLSDR  339 (482)
T ss_pred             cccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC--CCCCCcccc
Confidence            568999998762 12232   3788999999999999999999999    999   9999999999986  456789999


Q ss_pred             cCCHHHHHHHHhhhcCCCCCCC-cceeeccceee-CCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCC
Q psy9540          79 QNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYP  156 (214)
Q Consensus        79 ~~~~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~  156 (214)
                      +++||++|+++|++|++|+++. ++|.+.+|+++ +|+.||+|+.|.++.+++||||++|+||++|+||||++..    .
T Consensus       340 ~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----~  415 (482)
T PTZ00404        340 QSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----S  415 (482)
T ss_pred             ccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC----C
Confidence            9999999999999999999987 58999999999 9999999999999999999999999999999999999653    4


Q ss_pred             CCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         157 KYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       157 ~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      +..++|||+|+|+|+|++||++|++++++.|+++|+|+..++.+
T Consensus       416 ~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  459 (482)
T PTZ00404        416 NDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK  459 (482)
T ss_pred             CCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC
Confidence            56899999999999999999999999999999999999876643


No 12 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=5.5e-44  Score=308.62  Aligned_cols=190  Identities=18%  Similarity=0.297  Sum_probs=169.8

Q ss_pred             CCccchhhhhcCC----CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCC-CCCCCCHH
Q psy9540           9 CHHESCGYIIKGG----VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDD-KERCPTFE   76 (214)
Q Consensus         9 ~~~~~~~~ll~~~----~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~-~~~~~~~~   76 (214)
                      ...|+++.+++..    ..+++++..++..+++||+|||+++++|++    +||   +++++|++++++.. ....++++
T Consensus       242 ~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~  321 (463)
T PLN02774        242 THTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWN  321 (463)
T ss_pred             CcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHH
Confidence            3568999988642    245679999999999999999999999988    899   99999999998641 23567999


Q ss_pred             hhcCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCC
Q psy9540          77 ELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYP  156 (214)
Q Consensus        77 ~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~  156 (214)
                      +++++||++|+++|++|++|+++.+.|.+.+|+.++|+.||||+.|+++.+.+||||++|+||++|+|+||++.+..  .
T Consensus       322 ~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~--~  399 (463)
T PLN02774        322 DYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE--S  399 (463)
T ss_pred             HHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC--C
Confidence            99999999999999999999998888999999999999999999999999999999999999999999999975432  1


Q ss_pred             CCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         157 KYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       157 ~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      ...++|||+|+|+|+|++||++|++++++.||++|+|++.++.+
T Consensus       400 ~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~  443 (463)
T PLN02774        400 HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK  443 (463)
T ss_pred             CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc
Confidence            23699999999999999999999999999999999999987654


No 13 
>KOG0157|consensus
Probab=100.00  E-value=3e-44  Score=312.00  Aligned_cols=192  Identities=34%  Similarity=0.632  Sum_probs=167.0

Q ss_pred             CCCccchhhhh-cC-CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhh
Q psy9540           8 KCHHESCGYII-KG-GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEEL   78 (214)
Q Consensus         8 ~~~~~~~~~ll-~~-~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~   78 (214)
                      ....|++..+. +. ...+++++++++..+++||+||||++++|++    .||   +++++|+.++++.+... ......
T Consensus       270 ~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~-~~~~~~  348 (497)
T KOG0157|consen  270 KKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK-WEVEKL  348 (497)
T ss_pred             chhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC-CChhhh
Confidence            45677777433 33 3566789999999999999999999999998    999   99999999999852222 222333


Q ss_pred             cCCHHHHHHHHhhhcCCCCCCCcceeeccceeeC-CeeeCCCCEEEEchhHhhcCCCCCC-CCCCccCCCCCCCCCC-CC
Q psy9540          79 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIG-DYDIPKDATIMNYIYAMHRDPNVYE-NPDQFNPDRFLPEKFG-KY  155 (214)
Q Consensus        79 ~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~Rfl~~~~~-~~  155 (214)
                      ++|+|+++||+|+||++|++|.+.|.+.+|++++ ||.||+|+.|+++++++|||+.+|+ ||++|+|+||+++... ..
T Consensus       349 ~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~  428 (497)
T KOG0157|consen  349 DQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKR  428 (497)
T ss_pred             hhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCC
Confidence            3699999999999999999999999999999995 8999999999999999999999996 9999999999975443 44


Q ss_pred             CCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         156 PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       156 ~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      ++++|+|||+|+|+|+|++||++|+++++++++++|+|++..+..
T Consensus       429 ~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~  473 (497)
T KOG0157|consen  429 HPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK  473 (497)
T ss_pred             CCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC
Confidence            678999999999999999999999999999999999999998754


No 14 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.1e-43  Score=315.36  Aligned_cols=188  Identities=26%  Similarity=0.518  Sum_probs=170.0

Q ss_pred             CCccchhhhhcCC-CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhhcC
Q psy9540           9 CHHESCGYIIKGG-VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEELQN   80 (214)
Q Consensus         9 ~~~~~~~~ll~~~-~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~~~   80 (214)
                      ...++++.|++.+ ..+++++.++++.+++||+|||+++++|++    +||   +|+++|++++++.   ..++++++++
T Consensus       372 ~~~dil~~Ll~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~---~~~t~edL~k  448 (633)
T PLN02738        372 RDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD---RFPTIEDMKK  448 (633)
T ss_pred             ccchHHHHHHHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---CCCCHHHHcc
Confidence            3457889888764 345679999999999999999999999988    999   9999999999874   5689999999


Q ss_pred             CHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCC---CCCCC
Q psy9540          81 MPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKF---GKYPK  157 (214)
Q Consensus        81 ~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~---~~~~~  157 (214)
                      +|||+|||+|++|++|+.+.+.|.+.+|..++||.||+|+.|.++.|.+||||++||||++|+|+||+....   ....+
T Consensus       449 LPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~  528 (633)
T PLN02738        449 LKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQN  528 (633)
T ss_pred             CHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCC
Confidence            999999999999999999988899999999999999999999999999999999999999999999985321   12245


Q ss_pred             CcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         158 YNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       158 ~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      ..++|||.|+|+|+|++||++|+++++|.|+++|+|++.++.
T Consensus       529 ~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~  570 (633)
T PLN02738        529 FSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA  570 (633)
T ss_pred             CceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC
Confidence            689999999999999999999999999999999999998764


No 15 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1e-43  Score=310.84  Aligned_cols=190  Identities=24%  Similarity=0.420  Sum_probs=169.0

Q ss_pred             CccchhhhhcC-------CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCH
Q psy9540          10 HHESCGYIIKG-------GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTF   75 (214)
Q Consensus        10 ~~~~~~~ll~~-------~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~   75 (214)
                      ..|+++.+++.       ...+++++.+++..+++||+|||+.+++|++    +||   +|+++||+++++. ....+++
T Consensus       282 ~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~-~~~~~~~  360 (519)
T PLN00168        282 EHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGD-DQEEVSE  360 (519)
T ss_pred             cccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCCH
Confidence            45888988853       1255689999999999999999999999998    899   9999999999875 2356799


Q ss_pred             HhhcCCHHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCC-
Q psy9540          76 EELQNMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG-  153 (214)
Q Consensus        76 ~~~~~~~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~-  153 (214)
                      ++++++||++|+++|++|++|+.+.. +|.+.+|++++|+.||+|+.|.++.+++||||++|+||++|+|+||+++... 
T Consensus       361 ~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~  440 (519)
T PLN00168        361 EDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGE  440 (519)
T ss_pred             HHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCc
Confidence            99999999999999999999999875 7999999999999999999999999999999999999999999999975321 


Q ss_pred             -----CCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         154 -----KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       154 -----~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                           ...+..++|||.|+|+|+|++||++|++++++.||++|+|++.++.+
T Consensus       441 ~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  492 (519)
T PLN00168        441 GVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE  492 (519)
T ss_pred             cccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc
Confidence                 11345799999999999999999999999999999999999987643


No 16 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.5e-43  Score=308.36  Aligned_cols=188  Identities=22%  Similarity=0.355  Sum_probs=169.0

Q ss_pred             CCccchhhhhcCCCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhhcCC
Q psy9540           9 CHHESCGYIIKGGVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEELQNM   81 (214)
Q Consensus         9 ~~~~~~~~ll~~~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~~~~   81 (214)
                      .+.|+++.+++... +++++.+++..+++||+|||+++++|++    +||   +++++|++++++. ....+++++++++
T Consensus       276 ~~~dll~~ll~~~~-~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~-~~~~~t~~~l~~L  353 (502)
T PLN02426        276 ASKDLLSRFMASIN-DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP-NQEAASFEEMKEM  353 (502)
T ss_pred             CcchHHHHHHhcCC-CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC-CCCCCCHHHHhcC
Confidence            35799999998754 5668999999999999999999999988    999   9999999999875 2346899999999


Q ss_pred             HHHHHHHHhhhcCCCCCCCcceeeccceee-CCeeeCCCCEEEEchhHhhcCCCCC-CCCCCccCCCCCCCCCC-CCCCC
Q psy9540          82 PVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKFG-KYPKY  158 (214)
Q Consensus        82 ~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~~-~~~~~  158 (214)
                      ||++|+|+|++|++|+++...|.+.+|..+ +|+.||+|+.|.++.+++||||++| +||++|+||||+++... ...+.
T Consensus       354 pYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~  433 (502)
T PLN02426        354 HYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPF  433 (502)
T ss_pred             hHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCc
Confidence            999999999999999999888999998887 8999999999999999999999999 99999999999974321 22456


Q ss_pred             cccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCC
Q psy9540         159 NYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       159 ~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  198 (214)
                      .++|||.|+|.|+|+++|++|++++++.++++|+|++.++
T Consensus       434 ~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~  473 (502)
T PLN02426        434 KYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGR  473 (502)
T ss_pred             ccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecC
Confidence            7999999999999999999999999999999999999754


No 17 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.4e-43  Score=309.87  Aligned_cols=185  Identities=27%  Similarity=0.541  Sum_probs=167.5

Q ss_pred             CCccchhhhhcCC--------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCC
Q psy9540           9 CHHESCGYIIKGG--------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCP   73 (214)
Q Consensus         9 ~~~~~~~~ll~~~--------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~   73 (214)
                      ...|+++.+++..        ..+++++.+++..+++||+|||+++++|++    +||   +|+++|++++++.   ..+
T Consensus       290 ~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~---~~~  366 (516)
T PLN02290        290 YGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG---ETP  366 (516)
T ss_pred             CCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC---CCC
Confidence            3468888888631        134567899999999999999999999998    899   9999999999986   378


Q ss_pred             CHHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCC-CCCCCccCCCCCCCCC
Q psy9540          74 TFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLPEKF  152 (214)
Q Consensus        74 ~~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~Rfl~~~~  152 (214)
                      ++++++++||++|+|+|++|++|+++.++|.+.+|++++|+.||+|+.|.++.+++||||++| +||++|+|+||++...
T Consensus       367 ~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~  446 (516)
T PLN02290        367 SVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF  446 (516)
T ss_pred             CHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC
Confidence            999999999999999999999999998899999999999999999999999999999999999 8999999999995432


Q ss_pred             CCCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCC
Q psy9540         153 GKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       153 ~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  198 (214)
                        .....++|||.|+|+|+|++||++|++++++.||++|+|++.++
T Consensus       447 --~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~  490 (516)
T PLN02290        447 --APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN  490 (516)
T ss_pred             --CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC
Confidence              23457999999999999999999999999999999999998876


No 18 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.3e-43  Score=305.01  Aligned_cols=188  Identities=27%  Similarity=0.463  Sum_probs=171.4

Q ss_pred             CccchhhhhcCCC-CchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhhcCC
Q psy9540          10 HHESCGYIIKGGV-NKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEELQNM   81 (214)
Q Consensus        10 ~~~~~~~ll~~~~-~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~~~~   81 (214)
                      +.|+++.+++... .+++++.+++..+++||+|||+++++|++    +||   +++++|++++++.   ..+++++++++
T Consensus       244 ~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~l~~l  320 (466)
T PLN02655        244 RDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD---ERVTEEDLPNL  320 (466)
T ss_pred             cccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC---CCCCHHHHhcC
Confidence            4689999997743 56789999999999999999999999998    899   9999999999986   33899999999


Q ss_pred             HHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCCCCcc
Q psy9540          82 PVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNY  160 (214)
Q Consensus        82 ~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~  160 (214)
                      ||++++++|++|++|+.+.. +|.+.+|+.++|+.||+|+.|+++.+++||||++|+||++|+|+||++.+........+
T Consensus       321 ~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~~~~~  400 (466)
T PLN02655        321 PYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKT  400 (466)
T ss_pred             hHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcccCCcccc
Confidence            99999999999999999886 69999999999999999999999999999999999999999999999765433345789


Q ss_pred             cccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         161 QPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       161 ~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      +|||.|+|.|+|++||+.+++++++.||++|+|++.++..
T Consensus       401 ~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  440 (466)
T PLN02655        401 MAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE  440 (466)
T ss_pred             cCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc
Confidence            9999999999999999999999999999999999987643


No 19 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.4e-43  Score=307.38  Aligned_cols=188  Identities=23%  Similarity=0.433  Sum_probs=169.0

Q ss_pred             CccchhhhhcCC------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHH
Q psy9540          10 HHESCGYIIKGG------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFE   76 (214)
Q Consensus        10 ~~~~~~~ll~~~------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~   76 (214)
                      +.|+++.+++..      ..+++++.+++..+++||+|||+++++|++    +||   +++++|++++++.  ...++++
T Consensus       266 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~  343 (504)
T PLN00110        266 NPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR--NRRLVES  343 (504)
T ss_pred             CCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHH
Confidence            468999998542      234678999999999999999999999998    899   9999999999886  4568999


Q ss_pred             hhcCCHHHHHHHHhhhcCCCCCCC-cceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCC
Q psy9540          77 ELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKY  155 (214)
Q Consensus        77 ~~~~~~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~  155 (214)
                      +++++||++++|+|++|++|+.+. ++|.+.+|+.++||.||+|+.|.++.+++||||++|+||++|+|+||++......
T Consensus       344 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~  423 (504)
T PLN00110        344 DLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKI  423 (504)
T ss_pred             HhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCccc
Confidence            999999999999999999999987 6899999999999999999999999999999999999999999999996543221


Q ss_pred             ----CCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         156 ----PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       156 ----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                          ....++|||.|+|.|+|++||++|++++++.|+++|+|++.++.
T Consensus       424 ~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  471 (504)
T PLN00110        424 DPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV  471 (504)
T ss_pred             ccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC
Confidence                12479999999999999999999999999999999999998764


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.2e-43  Score=310.34  Aligned_cols=191  Identities=21%  Similarity=0.335  Sum_probs=166.3

Q ss_pred             CCccchhhhhcCC-----CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCC--------
Q psy9540           9 CHHESCGYIIKGG-----VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDD--------   68 (214)
Q Consensus         9 ~~~~~~~~ll~~~-----~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~--------   68 (214)
                      ...|+++.+++..     ..+++++++++..+++||+|||+++++|++    .||   +|+++|+++++++.        
T Consensus       269 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~  348 (516)
T PLN03195        269 VKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPED  348 (516)
T ss_pred             ccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccc
Confidence            3568999888532     245679999999999999999999999998    999   99999999987531        


Q ss_pred             ----------CCCCCCHHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceee-CCeeeCCCCEEEEchhHhhcCCCCC-
Q psy9540          69 ----------KERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-  136 (214)
Q Consensus        69 ----------~~~~~~~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-  136 (214)
                                ....+++++++++||++|||+|+||++|+++...|.+.+|..+ +|+.||+|+.|.++.+++||||++| 
T Consensus       349 ~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g  428 (516)
T PLN03195        349 SQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWG  428 (516)
T ss_pred             cchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhc
Confidence                      0245789999999999999999999999999988777777665 8999999999999999999999999 


Q ss_pred             CCCCCccCCCCCCCCC-CCCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         137 ENPDQFNPDRFLPEKF-GKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       137 ~~p~~f~p~Rfl~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      +||++|+||||++++. ....+..|+|||+|+|+|+|++||++|++++++.++++|+|++.++.
T Consensus       429 ~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~  492 (516)
T PLN03195        429 PDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH  492 (516)
T ss_pred             cChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC
Confidence            9999999999996432 22245679999999999999999999999999999999999987654


No 21 
>KOG0159|consensus
Probab=100.00  E-value=1.2e-43  Score=298.38  Aligned_cols=189  Identities=23%  Similarity=0.402  Sum_probs=172.2

Q ss_pred             ccchhhhhcCCCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhhcCCHH
Q psy9540          11 HESCGYIIKGGVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEELQNMPV   83 (214)
Q Consensus        11 ~~~~~~ll~~~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~~~~~~   83 (214)
                      ..++..++.....+.+++...++.+++||.||||.++.|++    +||   +++++|+.+++.. .+..++.+++.++||
T Consensus       300 ~~~l~~~L~~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~-~~~~~~~~~l~~~py  378 (519)
T KOG0159|consen  300 TGSLLELLLRKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPS-GNSELTQKALTNMPY  378 (519)
T ss_pred             hHHHHHHHHHccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCC-cccccchHHHhhCHH
Confidence            44555555444455568889999999999999999999999    999   9999999999886 367789999999999


Q ss_pred             HHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCCCCccccc
Q psy9540          84 LDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPF  163 (214)
Q Consensus        84 l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~F  163 (214)
                      |+|||+|++|++|.++...|...+|+++.||.||+||.|.++.+.+.+||++|++|++|+|+|||+++....++..++||
T Consensus       379 LrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPF  458 (519)
T KOG0159|consen  379 LRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPF  458 (519)
T ss_pred             HHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhcccccCCCCCceecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999988555588999999


Q ss_pred             CCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         164 AAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       164 g~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      |.|+|+|+||+||.+|+-++||+++++|+++..++.+
T Consensus       459 GfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p  495 (519)
T KOG0159|consen  459 GFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP  495 (519)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC
Confidence            9999999999999999999999999999999998644


No 22 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.1e-43  Score=306.92  Aligned_cols=189  Identities=27%  Similarity=0.445  Sum_probs=170.0

Q ss_pred             CCccchhhhhcCC----------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCC
Q psy9540           9 CHHESCGYIIKGG----------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKER   71 (214)
Q Consensus         9 ~~~~~~~~ll~~~----------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~   71 (214)
                      ...|+++.+++..          ..+++++.+++..+++||+|||+++++|++    +||   +++++|++++++.  ..
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~  346 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR--DR  346 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC--CC
Confidence            4578999998641          245678999999999999999999999998    999   9999999999876  46


Q ss_pred             CCCHHhhcCCHHHHHHHHhhhcCCCCCCC-cceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCC
Q psy9540          72 CPTFEELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPE  150 (214)
Q Consensus        72 ~~~~~~~~~~~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~  150 (214)
                      .++.++++++||++|+++|++|++|+++. ++|.+.+|++++|+.||+|+.|.++.+.+||||++|+||++|+|+||++.
T Consensus       347 ~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~  426 (517)
T PLN02687        347 LVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPG  426 (517)
T ss_pred             CCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCC
Confidence            78999999999999999999999999987 68999999999999999999999999999999999999999999999975


Q ss_pred             CCC-----CCCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         151 KFG-----KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       151 ~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      +..     ...+..++|||.|+|+|+|++||++|++++++.||++|+|++.++.
T Consensus       427 ~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  480 (517)
T PLN02687        427 GEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQ  480 (517)
T ss_pred             CCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCC
Confidence            432     1234579999999999999999999999999999999999998763


No 23 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=8e-43  Score=305.59  Aligned_cols=188  Identities=19%  Similarity=0.375  Sum_probs=169.3

Q ss_pred             CccchhhhhcC----C--CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHH
Q psy9540          10 HHESCGYIIKG----G--VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFE   76 (214)
Q Consensus        10 ~~~~~~~ll~~----~--~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~   76 (214)
                      ..|+++.+++.    +  ..++++++.++..+++||+|||+.+++|++    .||   +++++||+++++.  ...++.+
T Consensus       291 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~  368 (534)
T PLN03018        291 VEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGK--DRLVQES  368 (534)
T ss_pred             cccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC--CCCCCHH
Confidence            46899989853    2  146779999999999999999999999998    899   9999999999986  5678999


Q ss_pred             hhcCCHHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCC-
Q psy9540          77 ELQNMPVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK-  154 (214)
Q Consensus        77 ~~~~~~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~-  154 (214)
                      ++.++||++|+++|++|++|+.+.. .|.+.+|+.++||.||+|+.|.++.+++||||++|+||++|+|+||++.++.. 
T Consensus       369 ~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~  448 (534)
T PLN03018        369 DIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITK  448 (534)
T ss_pred             HhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccc
Confidence            9999999999999999999999886 68999999999999999999999999999999999999999999999754321 


Q ss_pred             -----CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         155 -----YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       155 -----~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                           ..+..++|||.|+|+|+|++||++|++++++.|+++|+|++.++.
T Consensus       449 ~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  498 (534)
T PLN03018        449 EVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF  498 (534)
T ss_pred             cccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC
Confidence                 235679999999999999999999999999999999999987753


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.3e-43  Score=302.20  Aligned_cols=187  Identities=22%  Similarity=0.380  Sum_probs=168.1

Q ss_pred             CccchhhhhcCC--CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCC--CCCCCCCHHhh
Q psy9540          10 HHESCGYIIKGG--VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGD--DKERCPTFEEL   78 (214)
Q Consensus        10 ~~~~~~~ll~~~--~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~--~~~~~~~~~~~   78 (214)
                      ..|+++.+++..  ..++++++.++..+++||+|||+.+++|++    +||   +++++|++++++.  ..+..++++++
T Consensus       232 ~~d~l~~ll~~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~  311 (452)
T PLN03141        232 PKDVVDVLLRDGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDY  311 (452)
T ss_pred             hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence            358888888753  345679999999999999999999999988    899   9999999988642  12345789999


Q ss_pred             cCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCCCC
Q psy9540          79 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKY  158 (214)
Q Consensus        79 ~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~  158 (214)
                      .++||++|+|+|++|++|+++.++|.+.+|++++||.||+|+.|+++.+++|||+++|+||++|+||||++.+.   .+.
T Consensus       312 ~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~---~~~  388 (452)
T PLN03141        312 MSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM---NNS  388 (452)
T ss_pred             hccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC---CCC
Confidence            99999999999999999999888999999999999999999999999999999999999999999999997643   456


Q ss_pred             cccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         159 NYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       159 ~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      .|+|||.|+|+|+|++||++|+++++|.|+++|+|++.++.
T Consensus       389 ~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~  429 (452)
T PLN03141        389 SFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT  429 (452)
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence            89999999999999999999999999999999999987763


No 25 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.7e-43  Score=305.39  Aligned_cols=189  Identities=21%  Similarity=0.385  Sum_probs=168.6

Q ss_pred             CCccchhhhhcCC------CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCH
Q psy9540           9 CHHESCGYIIKGG------VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTF   75 (214)
Q Consensus         9 ~~~~~~~~ll~~~------~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~   75 (214)
                      ...|+++.+++..      ..+++++.+++..+++||+|||+++++|++    +||   +++++|++++++.  ...+++
T Consensus       272 ~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~--~~~~t~  349 (514)
T PLN03112        272 KDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR--NRMVQE  349 (514)
T ss_pred             ccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC--CCcCCh
Confidence            3468999998631      245679999999999999999999999988    999   9999999999886  456899


Q ss_pred             HhhcCCHHHHHHHHhhhcCCCCCCC-cceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCC-
Q psy9540          76 EELQNMPVLDRCIKEVLRMYPPGYI-IARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG-  153 (214)
Q Consensus        76 ~~~~~~~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~-  153 (214)
                      ++++++||++|+|+|++|++|+.+. +.|.+.+|+.++|+.||+|+.|.++.+++||||++|+||++|+|+||++.... 
T Consensus       350 ~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~  429 (514)
T PLN03112        350 SDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSR  429 (514)
T ss_pred             hhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCc
Confidence            9999999999999999999999987 58999999999999999999999999999999999999999999998764321 


Q ss_pred             -C---CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         154 -K---YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       154 -~---~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                       .   ..+..++|||.|+|+|+|++||++|++++++.+|++|+|++.++.
T Consensus       430 ~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  479 (514)
T PLN03112        430 VEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGL  479 (514)
T ss_pred             cccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCC
Confidence             1   134579999999999999999999999999999999999998653


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.5e-42  Score=298.28  Aligned_cols=187  Identities=19%  Similarity=0.341  Sum_probs=169.4

Q ss_pred             CCccchhhhhcC-CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCC-CCCCCCHHhhc
Q psy9540           9 CHHESCGYIIKG-GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDD-KERCPTFEELQ   79 (214)
Q Consensus         9 ~~~~~~~~ll~~-~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~-~~~~~~~~~~~   79 (214)
                      ...|+++.++++ ...+++++.+++..+++||+|||+++++|++    +||   +++++|++++++.. ....+++++++
T Consensus       245 ~~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~  324 (463)
T PLN02196        245 SHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTK  324 (463)
T ss_pred             CcccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHh
Confidence            457899998865 3356779999999999999999999999999    899   99999999998642 23567899999


Q ss_pred             CCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCCCCc
Q psy9540          80 NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYN  159 (214)
Q Consensus        80 ~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~  159 (214)
                      ++||++|+++|++|++|+.++..|.+.+|+.++||.||+|+.|+++.+++||||++|+||++|+|+||++..    .+..
T Consensus       325 ~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~----~~~~  400 (463)
T PLN02196        325 KMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP----KPNT  400 (463)
T ss_pred             cChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC----CCCc
Confidence            999999999999999999998889999999999999999999999999999999999999999999999632    4568


Q ss_pred             ccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCC
Q psy9540         160 YQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRY  199 (214)
Q Consensus       160 ~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~  199 (214)
                      ++|||.|+|.|+|+++|++|++++++.|+++|+|++.++.
T Consensus       401 ~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  440 (463)
T PLN02196        401 FMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS  440 (463)
T ss_pred             ccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC
Confidence            9999999999999999999999999999999999998764


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.7e-41  Score=293.48  Aligned_cols=192  Identities=19%  Similarity=0.317  Sum_probs=171.6

Q ss_pred             CCccchhhhhcCC-CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCC-CCCCCCHHhhc
Q psy9540           9 CHHESCGYIIKGG-VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDD-KERCPTFEELQ   79 (214)
Q Consensus         9 ~~~~~~~~ll~~~-~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~-~~~~~~~~~~~   79 (214)
                      ...|+++.+++.. ..+++++.+++..+++||+|||+.+++|++    +||   +++++|++++.+.. ....++++++.
T Consensus       248 ~~~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~  327 (472)
T PLN02987        248 KKKDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYK  327 (472)
T ss_pred             ccccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHh
Confidence            4579999998763 356779999999999999999999999998    899   99999999987531 13457889999


Q ss_pred             CCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCCCCc
Q psy9540          80 NMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYN  159 (214)
Q Consensus        80 ~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~  159 (214)
                      ++||++|+++|++|++|+++.+.|.+.+|++++||.||+|+.|+++.+.+||||++|++|++|+|+||++..........
T Consensus       328 ~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~  407 (472)
T PLN02987        328 SMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNV  407 (472)
T ss_pred             cChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcc
Confidence            99999999999999999998888999999999999999999999999999999999999999999999976443334567


Q ss_pred             ccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         160 YQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       160 ~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      ++|||.|+|.|+|++||++|++++++.|+++|+|++.++.+
T Consensus       408 ~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  448 (472)
T PLN02987        408 FTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK  448 (472)
T ss_pred             eECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc
Confidence            99999999999999999999999999999999999987654


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.8e-41  Score=294.59  Aligned_cols=187  Identities=19%  Similarity=0.334  Sum_probs=168.0

Q ss_pred             CCccchhhhhcCC-----CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCC--CCCCC
Q psy9540           9 CHHESCGYIIKGG-----VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDK--ERCPT   74 (214)
Q Consensus         9 ~~~~~~~~ll~~~-----~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~--~~~~~   74 (214)
                      ...|+++.+++..     ..+++++..++..+++||+|||+++++|++    +||   +++++|++++++...  ...++
T Consensus       264 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~  343 (490)
T PLN02302        264 RKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLT  343 (490)
T ss_pred             CcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            4578999998642     245678999999999999999999999998    999   999999999986411  12378


Q ss_pred             HHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCC
Q psy9540          75 FEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK  154 (214)
Q Consensus        75 ~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~  154 (214)
                      +++++++||++|+|+|++|++|+.+...|.+.+|+.++|+.||+|+.|.++.+++||||++|+||++|+|+||++...  
T Consensus       344 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~--  421 (490)
T PLN02302        344 LKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP--  421 (490)
T ss_pred             HHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC--
Confidence            999999999999999999999999888899999999999999999999999999999999999999999999996542  


Q ss_pred             CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCC
Q psy9540         155 YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       155 ~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  198 (214)
                       .+..++|||.|+|.|+|++||.+|++++++.|+++|+|++.++
T Consensus       422 -~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  464 (490)
T PLN02302        422 -KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP  464 (490)
T ss_pred             -CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence             4568999999999999999999999999999999999999865


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.9e-41  Score=294.59  Aligned_cols=188  Identities=26%  Similarity=0.524  Sum_probs=165.9

Q ss_pred             CccchhhhhcC-CCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhhcCC
Q psy9540          10 HHESCGYIIKG-GVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEELQNM   81 (214)
Q Consensus        10 ~~~~~~~ll~~-~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~~~~   81 (214)
                      ..++++.+++. ...+++++..+++.+++||+|||+++++|++    +||   +++++|++++++.   ..+++++++++
T Consensus       260 ~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~---~~~~~~~~~~l  336 (489)
T PLN02936        260 DPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG---RPPTYEDIKEL  336 (489)
T ss_pred             chHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC---CCCCHHHHhhC
Confidence            46788888876 2355679999999999999999999999999    899   9999999999885   45789999999


Q ss_pred             HHHHHHHHhhhcCCCCCCCc-ceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCC---CCCC
Q psy9540          82 PVLDRCIKEVLRMYPPGYII-ARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG---KYPK  157 (214)
Q Consensus        82 ~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~---~~~~  157 (214)
                      ||++|+++|++|++|+.+.. .|.+..++.++|+.||+|+.|+++.+.+||||++|+||++|+|+||+.++..   ...+
T Consensus       337 pyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~  416 (489)
T PLN02936        337 KYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTD  416 (489)
T ss_pred             HHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCC
Confidence            99999999999999998876 4555677777999999999999999999999999999999999999965431   1134


Q ss_pred             CcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCCCC
Q psy9540         158 YNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYK  200 (214)
Q Consensus       158 ~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~~~  200 (214)
                      ..++|||.|+|+|+|++||++|++++++.|+++|+|+++++.+
T Consensus       417 ~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~  459 (489)
T PLN02936        417 FRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD  459 (489)
T ss_pred             cceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc
Confidence            5899999999999999999999999999999999999987643


No 30 
>KOG0684|consensus
Probab=100.00  E-value=4.6e-40  Score=271.45  Aligned_cols=188  Identities=28%  Similarity=0.567  Sum_probs=169.5

Q ss_pred             Cccchhhhhc----CCCCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCCHHhh
Q psy9540          10 HHESCGYIIK----GGVNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPTFEEL   78 (214)
Q Consensus        10 ~~~~~~~ll~----~~~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~~~~~   78 (214)
                      ..+++..+++    ....++++++..++.+++||+.||+.+..|++    +||   +.+++|+..++|+ .....+++.+
T Consensus       252 ~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~-~~~~l~~d~L  330 (486)
T KOG0684|consen  252 DNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE-KKEKLTYDQL  330 (486)
T ss_pred             cHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc-cCCCCCHHHH
Confidence            3477777776    34566789999999999999999999999998    999   8999999999987 3444899999


Q ss_pred             cCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCC----eeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCC
Q psy9540          79 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGD----YDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK  154 (214)
Q Consensus        79 ~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~  154 (214)
                      +.+|.|+.||+|++||+||.+.+.|.+.+|..+.+    |.||+|..|.++...+|+||++|++|++|+|+||+++++..
T Consensus       331 ~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~  410 (486)
T KOG0684|consen  331 KDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGES  410 (486)
T ss_pred             hcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccc
Confidence            99999999999999999999999999999999977    99999999999999999999999999999999999777654


Q ss_pred             C-----CCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCC
Q psy9540         155 Y-----PKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       155 ~-----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  198 (214)
                      .     -...+||||+|.|.|||+.||++|++.++..+|+.|+|++.++
T Consensus       411 ~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~  459 (486)
T KOG0684|consen  411 KKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG  459 (486)
T ss_pred             ccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC
Confidence            1     2345699999999999999999999999999999999999996


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.3e-37  Score=263.38  Aligned_cols=165  Identities=27%  Similarity=0.552  Sum_probs=149.7

Q ss_pred             CCCCccchhhhhcC---C--CCchhhHHHhHhHHhhccchhHHHHHHHHH----hCH---HHHHHHHHHHhCCCCCCCCC
Q psy9540           7 NKCHHESCGYIIKG---G--VNKSYILHHPMNPMMIEFDRTTRFGVNMSI----RHP---CKIFEELHSIFGDDKERCPT   74 (214)
Q Consensus         7 ~~~~~~~~~~ll~~---~--~~~~~~~~~~~~~l~~ag~~tta~~l~~~l----~~p---~~l~~Ev~~~~~~~~~~~~~   74 (214)
                      ..+..|+++.++..   +  ..+++++.+++..+++||+|||+++++|++    +||   +++++|.+.           
T Consensus       211 ~~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-----------  279 (411)
T COG2124         211 AAPRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-----------  279 (411)
T ss_pred             cCCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------
Confidence            66788999999844   2  257889999999999999999999999988    898   344444332           


Q ss_pred             HHhhcCCHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCC
Q psy9540          75 FEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGK  154 (214)
Q Consensus        75 ~~~~~~~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~  154 (214)
                             ||++++++|++|++|+++...|.+++|++++|+.||+|+.|.+.++.+||||++|++|++|+|+||.      
T Consensus       280 -------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------  346 (411)
T COG2124         280 -------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------  346 (411)
T ss_pred             -------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------
Confidence                   7999999999999999999889999999999999999999999999999999999999999999987      


Q ss_pred             CCCCcccccCCCccCCcchHHHHHHHHHHHHHHhhccEEeeCCC
Q psy9540         155 YPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       155 ~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~l~~ll~~f~~~~~~~  198 (214)
                         ..++|||+|+|.|+|..||++|++++++.+|++|++....+
T Consensus       347 ---~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~  387 (411)
T COG2124         347 ---NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE  387 (411)
T ss_pred             ---CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence               57899999999999999999999999999999999988776


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=6.9e-36  Score=258.12  Aligned_cols=175  Identities=21%  Similarity=0.361  Sum_probs=148.6

Q ss_pred             CchhhHHHhHhH-HhhccchhHHHHHHHHH----hCH----HHHHHHHHHHhCCCCCCCCCHHhhcCCHHHHHHHHhhhc
Q psy9540          23 NKSYILHHPMNP-MMIEFDRTTRFGVNMSI----RHP----CKIFEELHSIFGDDKERCPTFEELQNMPVLDRCIKEVLR   93 (214)
Q Consensus        23 ~~~~~~~~~~~~-l~~ag~~tta~~l~~~l----~~p----~~l~~Ev~~~~~~~~~~~~~~~~~~~~~~l~a~i~E~lR   93 (214)
                      .++++++++++. +.+++++|++++++|++    +||    +++++|++++++. ....+++++++++||++++++|++|
T Consensus       267 l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~-~~~~~t~~~l~~l~yl~avi~EtLR  345 (480)
T PLN02648        267 ISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKA-GGGGVTFAALEKMPLVKSVVYEALR  345 (480)
T ss_pred             CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhcc-CCCCCCHHHHhcCHHHHHHHHHHHh
Confidence            566788887764 44566777778888877    776    8999999999864 2356899999999999999999999


Q ss_pred             CCCCCCCcceeeccceeeC----CeeeCCCCEEEEchhHhhcCCCCCCCCCCccCCCCCCCCCCCCCCCccccc------
Q psy9540          94 MYPPGYIIARRIRREIKIG----DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPF------  163 (214)
Q Consensus        94 l~p~~~~~~r~~~~~~~i~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~Rfl~~~~~~~~~~~~~~F------  163 (214)
                      ++|+++...|.+.+|+.++    ||.||+|+.|+++.+.+||||++|+||++|+|+||+++...  ....+++|      
T Consensus       346 l~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~--~~~~~~~f~~g~~~  423 (480)
T PLN02648        346 IEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE--KLLKYVFWSNGRET  423 (480)
T ss_pred             hcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc--ccccccccCCCccc
Confidence            9999999889999999996    79999999999999999999999999999999999875432  12234444      


Q ss_pred             ---CCCccCCcchHHHHHHHHHHHHHHhhccE-EeeCCCCC
Q psy9540         164 ---AAGNRKCIAYKYAMLQMKIVISTVLRHFK-ILPSPRYK  200 (214)
Q Consensus       164 ---g~G~r~C~G~~lA~~~~~~~l~~ll~~f~-~~~~~~~~  200 (214)
                         |+|+|.|+|++||++|++++++.|+++|+ |++.++..
T Consensus       424 ~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        424 ESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             CCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence               66789999999999999999999999998 99887654


No 33 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=61.41  E-value=6.8  Score=28.21  Aligned_cols=23  Identities=22%  Similarity=0.482  Sum_probs=16.9

Q ss_pred             cCCcchHHHHHHHHHHHHHHhhc
Q psy9540         168 RKCIAYKYAMLQMKIVISTVLRH  190 (214)
Q Consensus       168 r~C~G~~lA~~~~~~~l~~ll~~  190 (214)
                      -+|.|+.||..++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999864


No 34 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=45.57  E-value=15  Score=24.14  Aligned_cols=21  Identities=19%  Similarity=0.319  Sum_probs=17.9

Q ss_pred             HHHHHHHHHHhhccEEeeCCC
Q psy9540         178 LQMKIVISTVLRHFKILPSPR  198 (214)
Q Consensus       178 ~~~~~~l~~ll~~f~~~~~~~  198 (214)
                      .-|+-++..+|+-|+|.+++-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            347889999999999999873


No 35 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=42.57  E-value=20  Score=21.88  Aligned_cols=8  Identities=50%  Similarity=1.398  Sum_probs=6.0

Q ss_pred             cCCCCCCC
Q psy9540         143 NPDRFLPE  150 (214)
Q Consensus       143 ~p~Rfl~~  150 (214)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            68888854


No 36 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=38.44  E-value=35  Score=26.40  Aligned_cols=43  Identities=19%  Similarity=0.308  Sum_probs=29.6

Q ss_pred             CHHHHHHHHhhhcCCCCCCCcceeeccceeeCCeeeCCCCEEEE
Q psy9540          81 MPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMN  124 (214)
Q Consensus        81 ~~~l~a~i~E~lRl~p~~~~~~r~~~~~~~i~g~~ip~g~~v~~  124 (214)
                      -..+.|+|.|..-... ...+.-+..+|+.++|..||+|+.++-
T Consensus        52 ~n~I~A~V~~~qtv~~-Gs~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVD-GSRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeC-CCEEEEEEcCceEECCEEeCCCCEEEE
Confidence            3456777887765532 223333467889999999999988774


No 37 
>KOG3506|consensus
Probab=27.46  E-value=28  Score=20.73  Aligned_cols=11  Identities=36%  Similarity=0.896  Sum_probs=9.0

Q ss_pred             cccCCCccCCc
Q psy9540         161 QPFAAGNRKCI  171 (214)
Q Consensus       161 ~~Fg~G~r~C~  171 (214)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999984


No 38 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=23.35  E-value=55  Score=23.17  Aligned_cols=21  Identities=24%  Similarity=0.442  Sum_probs=17.3

Q ss_pred             eeccceeeCCeeeCCCCEEEE
Q psy9540         104 RIRREIKIGDYDIPKDATIMN  124 (214)
Q Consensus       104 ~~~~~~~i~g~~ip~g~~v~~  124 (214)
                      .++.|..+.|..||+|++|..
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            456688999999999999854


No 39 
>KOG1429|consensus
Probab=21.47  E-value=1.1e+02  Score=25.34  Aligned_cols=16  Identities=19%  Similarity=0.085  Sum_probs=8.2

Q ss_pred             HHHHHhhccEEeeCCC
Q psy9540         183 VISTVLRHFKILPSPR  198 (214)
Q Consensus       183 ~l~~ll~~f~~~~~~~  198 (214)
                      +.+..|+.=.|++-++
T Consensus       216 f~~q~lr~epltv~g~  231 (350)
T KOG1429|consen  216 FIAQALRGEPLTVYGD  231 (350)
T ss_pred             HHHHHhcCCCeEEEcC
Confidence            4455555555555443


Done!