RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9540
(214 letters)
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 120 bits (302), Expect = 8e-33
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 55 CKIFEELHSIFGDDKERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDY 114
K+ EE+ ++ + PT++ + M LD + E LR++P + R +++++I
Sbjct: 302 QKLQEEIDAVLPNK--APPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGM 359
Query: 115 DIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYK 174
IPK +M YA+HRDP + P++F P+RF + Y Y PF +G R CI +
Sbjct: 360 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMR 419
Query: 175 YAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTL 213
+A++ MK+ + VL++F P +T LK + L
Sbjct: 420 FALMNMKLALIRVLQNFSFKPCK--ETQIPLKLSLGGLL 456
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 110 bits (275), Expect = 5e-29
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 28 LHHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDRC 87
L R + + ++ +E+ I G + + P++++ MP +
Sbjct: 268 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK--PSWDDKCKMPYTEAV 325
Query: 88 IKEVLRMYP-PGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDR 146
+ EVLR I + + Y IPK T++ +Y++H D + +P+ F+P+R
Sbjct: 326 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 385
Query: 147 FLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLK 206
FL K PF+ G R C+ A ++M + + +L+ F + + + DLK
Sbjct: 386 FLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH--ELVPDLK 443
Query: 207 YEMRVTL 213
+ +TL
Sbjct: 444 PRLGMTL 450
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 106 bits (264), Expect = 1e-27
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 3/167 (1%)
Query: 49 MSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIAR-RIRR 107
++ +E+ + G R P ++ MP D I E+ R+ + +
Sbjct: 289 KYPHVTERVQKEIEQVIGSH--RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 346
Query: 108 EIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGN 167
+ + Y IPK+ + + + DP +E P+ FNP FL + PF+ G
Sbjct: 347 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 406
Query: 168 RKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEMRVTLT 214
R C+ A ++ + +T+L++F I + ID E V
Sbjct: 407 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNV 453
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 89.4 bits (220), Expect = 2e-21
Identities = 35/185 (18%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 32 MNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDRCIKEV 91
+ F + +++P + + + P++++++ + + + E
Sbjct: 260 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEA 319
Query: 92 LRMYPPGYIIARRIRREIKI-GDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPDRFLP 149
LR++P + + + + G+Y + K +M I +HRD ++ ++ ++F P+RF
Sbjct: 320 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 379
Query: 150 EKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILPSPRYKTIDDLKYEM 209
P++ ++PF G R CI ++A+ + +V+ +L+HF Y +L +
Sbjct: 380 PS--AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY----ELDIKE 433
Query: 210 RVTLT 214
+TL
Sbjct: 434 TLTLK 438
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 85.9 bits (211), Expect = 3e-20
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 53 HPCKIFEELHSIFGDDKERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIR-REIKI 111
K+ EE+ + G ++ P ++ +MP D + EV R +IK
Sbjct: 294 VTAKVQEEIERVIGRNRS--PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF 351
Query: 112 GDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCI 171
+Y IPK TI+ + ++ D + NP+ F+P FL E + PF+AG R C+
Sbjct: 352 RNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICV 411
Query: 172 AYKYAMLQMKIVISTVLRHFKILPSPRYKTID 203
A +++ + ++++L++F + K +D
Sbjct: 412 GEALAGMELFLFLTSILQNFNLKSLVDPKNLD 443
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 79.1 bits (193), Expect = 6e-18
Identities = 29/188 (15%), Positives = 59/188 (31%), Gaps = 14/188 (7%)
Query: 7 NKCHHESCGYIIKGGVNKSYILHHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFG 66
++ N ++ + + + + + S
Sbjct: 228 VDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP 287
Query: 67 DDKERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYI 126
+ + ++ R + E +R P R + ++ +I + IM
Sbjct: 288 EQLALAK-----SDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSY 342
Query: 127 YAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVIST 186
+ +RD V+ NPD+F+ RF + F G C+ A L+MKI
Sbjct: 343 PSANRDEEVFSNPDEFDITRFP---------NRHLGFGWGAHMCLGQHLAKLEMKIFFEE 393
Query: 187 VLRHFKIL 194
+L K +
Sbjct: 394 LLPKLKSV 401
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 74.7 bits (182), Expect = 2e-16
Identities = 22/129 (17%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 79 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYEN 138
N + ++EV R YP G + ++++ + + K +++ +Y + DP ++++
Sbjct: 266 GNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDH 325
Query: 139 PDQFNPDRFLPEKFGKYPKYNYQPFAAG----NRKCIAYKYAMLQMKIVISTVLRHFKIL 194
PD+F P+RF + ++ P G +C + MK + ++ +
Sbjct: 326 PDEFRPERFAEREEN---LFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYD 382
Query: 195 PSPRYKTID 203
+
Sbjct: 383 VPEQSLHYS 391
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 71.0 bits (172), Expect = 4e-15
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 94 MYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG 153
+ + I + I+ A +R P+ +E+ D F+ R + E
Sbjct: 281 PAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTVKE--- 337
Query: 154 KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 194
+ F G C+ A +++ + + ++ F L
Sbjct: 338 ------HLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDL 372
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 68.7 bits (166), Expect = 2e-14
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 79 QNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYEN 138
++ L ++E+LR P R E++IG IP+ +T++ A +RDP + +
Sbjct: 267 RDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPD 326
Query: 139 PDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 194
P +F+ R + F G C+ A L+ ++ + + F L
Sbjct: 327 PHRFDVTRD---------TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPAL 373
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 68.7 bits (166), Expect = 2e-14
Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 1/186 (0%)
Query: 9 CHHESCGYIIKGGVNKSYILHHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDD 68
E+ + + + +
Sbjct: 228 VKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG 287
Query: 69 KERCPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYA 128
R +F L+ +P L+ +KE LR++PP I+ R + E ++ + I + +
Sbjct: 288 DGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAI 347
Query: 129 MHRDPNVYENPDQFNPDRFL-PEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTV 187
+R P + +P F P R+ P + ++ + PF AG +C+ +A++Q+K + S +
Sbjct: 348 SNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVL 407
Query: 188 LRHFKI 193
LR ++
Sbjct: 408 LREYEF 413
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 68.3 bits (165), Expect = 3e-14
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 94 MYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFG 153
I R + ++ IGD + + I+ + +RD V+ENPD+FN +R P
Sbjct: 279 HTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP--- 335
Query: 154 KYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFK 192
+ F G+ +CIA A ++ V ST+ + F
Sbjct: 336 ----QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFP 370
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 66.0 bits (159), Expect = 2e-13
Identities = 19/169 (11%), Positives = 46/169 (27%), Gaps = 11/169 (6%)
Query: 29 HHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDR-- 86
N + M + + + + +
Sbjct: 212 QASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAV 271
Query: 87 CIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVY-ENPDQFNPD 145
+ + P +++ R ++ +GD IP ++ A+ RD + D+F+
Sbjct: 272 VEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLT 331
Query: 146 RFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 194
R + F G C + ++ + + + F L
Sbjct: 332 RTSG--------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHL 372
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 65.2 bits (157), Expect = 4e-13
Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 11/168 (6%)
Query: 29 HHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDRCI 88
+ F V + + I + + + +
Sbjct: 209 VVAEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRA 268
Query: 89 KEVLRMYPPGYIIA--RRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDR 146
+ L Y R R ++ + +I K +++ + A +RDP + + D+ + R
Sbjct: 269 VDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR 328
Query: 147 FLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKIL 194
+ F G C+ A L+++ V + + R F L
Sbjct: 329 ---------EPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPAL 367
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 63.6 bits (153), Expect = 1e-12
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 87 CIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDR 146
+ V + P R +++ I I ++ I +RD + +PD + +R
Sbjct: 279 VNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 338
Query: 147 FLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFK 192
+ F G C+ A +++ T+ R F
Sbjct: 339 A---------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFP 375
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 63.7 bits (153), Expect = 1e-12
Identities = 19/164 (11%), Positives = 47/164 (28%), Gaps = 9/164 (5%)
Query: 29 HHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDRCI 88
+ + + + + ++ + E +
Sbjct: 214 AVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDE 273
Query: 89 KEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFL 148
+ ++R +++I I + A +RDP V+ +PD+ + +R
Sbjct: 274 LLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERS- 332
Query: 149 PEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFK 192
+ F G C A L+ ++++ VL
Sbjct: 333 --------PNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVP 368
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 62.5 bits (150), Expect = 3e-12
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 123 MNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKI 182
+ + + + F P+RFL E+ P Y PF G R C+ +A+L+ I
Sbjct: 291 TLVLSPYVTQRLHFPDGEAFRPERFLEERGT--PSGRYFPFGLGQRLCLGRDFALLEGPI 348
Query: 183 VISTVLRHFKILPSPRYKTIDDL 205
V+ R F++ P P + + +
Sbjct: 349 VLRAFFRRFRLDPLPFPRVLAQV 371
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 62.1 bits (149), Expect = 5e-12
Identities = 22/167 (13%), Positives = 44/167 (26%), Gaps = 9/167 (5%)
Query: 26 YILHHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLD 85
+ + +N I D R + + + L + +EL P
Sbjct: 212 IVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERI 271
Query: 86 RCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFNPD 145
E L R + + + + K I+ D P +
Sbjct: 272 PAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFS 331
Query: 146 RFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFK 192
R K ++ F G+ C+ A ++ + + L
Sbjct: 332 R---------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIP 369
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 61.0 bits (146), Expect = 9e-12
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 9/82 (10%)
Query: 113 DYDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIA 172
I K + I + RD V+ PD F+ R + G C
Sbjct: 302 GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPG 352
Query: 173 YKYAMLQMKIVISTVLRHFKIL 194
A L+ +I + T+ R F +
Sbjct: 353 VSLARLEAEIAVGTIFRRFPEM 374
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 60.2 bits (144), Expect = 2e-11
Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 9/173 (5%)
Query: 23 NKSYILHHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMP 82
I+ + G + + + +
Sbjct: 179 KGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREK 238
Query: 83 VLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQF 142
+ ++E LR PP R + ++KI D I + + +I + +RD V+++PD F
Sbjct: 239 GALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSF 298
Query: 143 NPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHFKILP 195
PDR + F +G C+ A L+ +I + + F++
Sbjct: 299 IPDRT---------PNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKE 342
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 59.0 bits (141), Expect = 5e-11
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 114 YDIPKDATIMNYIYAMHRDPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAY 173
+ K ++ + + DP + NP DR P ++ F G C
Sbjct: 296 VLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGS 347
Query: 174 KYAMLQMKIVISTVLRHFK 192
+I I +L+
Sbjct: 348 ALGRRHAQIGIEALLKKMP 366
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 55.2 bits (131), Expect = 8e-10
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 72 CPTFEELQNMPVLDRCIKEVLRMYPPGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHR 131
++ ++ + + I+E LR PP R+ + +K+GD I + + +I + +R
Sbjct: 228 FNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR 287
Query: 132 DPNVYENPDQFNPDRFLPEKFGKYPKYNYQPFAAGNRKCIAYKYAMLQMKIVISTVLRHF 191
D V+ + ++F PDR + F +G C+ A L+ +I I + F
Sbjct: 288 DEEVFHDGEKFIPDRN---------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
Query: 192 KILP 195
+ +
Sbjct: 339 RHIE 342
>d1l8na1 c.1.8.10 (A:143-678) alpha-D-glucuronidase catalytic domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 536
Score = 26.2 bits (58), Expect = 3.3
Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 29 HHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEEL 78
+H + I DRT G + ++ E +++ + + CP +EL
Sbjct: 401 YHYADRDGIGVDRTVATGTGYTAQYF----PENAAMY-ESLDTCP--DEL 443
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 26.1 bits (56), Expect = 3.7
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 97 PGYIIARRIRREIKIGDYDIPKDATIMNYIYAMHRDPNVYENPDQFN 143
P + RI + D+ + KD + I + + + +PDQF
Sbjct: 229 PKSVTPSRIAENFDVWDFRLDKD--ELGEIAKLDQGKRLGPDPDQFG 273
>d2j44a1 b.3.1.3 (A:110-223) Pullulanase PulA {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 114
Score = 25.2 bits (55), Expect = 3.8
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 98 GYIIARRIRREIKIGDYD-IPKDATIMNYIYAMHRDPNVYENPDQFN 143
G+++ + ++KI + D + I+ D ++Y NP +
Sbjct: 67 GFLLLDESKGDVKIRKENYKFTDLKNHSQIFLKDDDESIYTNPYYVH 113
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]}
Length = 250
Score = 25.7 bits (55), Expect = 4.8
Identities = 5/59 (8%), Positives = 16/59 (27%)
Query: 28 LHHPMNPMMIEFDRTTRFGVNMSIRHPCKIFEELHSIFGDDKERCPTFEELQNMPVLDR 86
+ + + + + H E++ G + E+ N+ +
Sbjct: 109 RLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPFINILPFES 167
>d2ahua1 c.124.1.3 (A:283-529) Putative enzyme YdiF C-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 247
Score = 25.0 bits (54), Expect = 6.8
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 100 IIARRIRREIKIGDY 114
++ARR E++ G
Sbjct: 8 LVARRALFEMRKGAV 22
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.143 0.449
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 930,498
Number of extensions: 47993
Number of successful extensions: 222
Number of sequences better than 10.0: 1
Number of HSP's gapped: 188
Number of HSP's successfully gapped: 36
Length of query: 214
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 132
Effective length of database: 1,281,736
Effective search space: 169189152
Effective search space used: 169189152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)