Your job contains 1 sequence.
>psy9547
MASNLSAKEILAFQESILTWYKQNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEK
FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI
KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQ
TNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLL
TVVVKTDTNKYLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKCLG
NVKHVFSHLKWNMDVYSGTAKEKTIPANKTYKLITETQMKKYAFPVPYQKVWKLFTKSKG
LKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9547
(363 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|BA_0522 - symbol:BA_0522 "A/G-specific adenine g... 713 2.1e-70 1
DICTYBASE|DDB_G0270764 - symbol:myh "monofunctional DNA g... 512 3.7e-60 3
RGD|620045 - symbol:Mutyh "mutY homolog (E. coli)" specie... 462 4.8e-54 2
UNIPROTKB|Q8R5G2 - symbol:Mutyh "A/G-specific adenine DNA... 462 4.8e-54 2
MGI|MGI:1917853 - symbol:Mutyh "mutY homolog (E. coli)" s... 459 6.1e-52 2
TIGR_CMR|CPS_4148 - symbol:CPS_4148 "A/G-specific adenine... 534 1.9e-51 1
UNIPROTKB|E2RG99 - symbol:MUTYH "Uncharacterized protein"... 460 2.6e-51 2
UNIPROTKB|E5KP25 - symbol:MUTYH "A/G-specific adenine DNA... 452 2.3e-50 2
UNIPROTKB|Q9UIF7 - symbol:MUTYH "A/G-specific adenine DNA... 452 2.3e-50 2
ZFIN|ZDB-GENE-081104-193 - symbol:mutyh "mutY homolog (E.... 447 2.3e-50 2
UNIPROTKB|F1S368 - symbol:MUTYH "Uncharacterized protein"... 455 2.9e-50 2
UNIPROTKB|E1BZT8 - symbol:MUTYH "Uncharacterized protein"... 434 2.0e-49 2
UNIPROTKB|F1P514 - symbol:MUTYH "Uncharacterized protein"... 434 3.3e-49 2
UNIPROTKB|Q9KUR3 - symbol:VC_0452 "A/G-specific adenine g... 505 2.3e-48 1
TIGR_CMR|VC_0452 - symbol:VC_0452 "A/G-specific adenine g... 505 2.3e-48 1
TAIR|locus:2135828 - symbol:AT4G12740 species:3702 "Arabi... 319 9.6e-48 3
UNIPROTKB|F1N4K4 - symbol:MUTYH "Uncharacterized protein"... 426 3.3e-47 2
TIGR_CMR|SO_3368 - symbol:SO_3368 "A/G-specific adenine g... 490 8.8e-47 1
UNIPROTKB|P17802 - symbol:mutY "adenine glycosylase; G.C ... 489 1.1e-46 1
TIGR_CMR|CBU_0940 - symbol:CBU_0940 "A/G-specific adenine... 480 1.0e-45 1
TIGR_CMR|CJE_1792 - symbol:CJE_1792 "A/G-specific adenine... 432 2.3e-44 2
UNIPROTKB|Q5T413 - symbol:MUTYH "A/G-specific adenine DNA... 452 9.3e-43 1
POMBASE|SPAC26A3.02 - symbol:myh1 "adenine DNA glycosylas... 402 4.6e-42 2
GENEDB_PFALCIPARUM|PF11_0306 - symbol:PF11_0306 "A/G-spec... 348 5.6e-41 3
UNIPROTKB|Q8II68 - symbol:PF11_0306 "A/G-specific adenine... 348 5.6e-41 3
TIGR_CMR|SPO_3448 - symbol:SPO_3448 "A/G-specific adenine... 425 6.8e-40 1
UNIPROTKB|E9PM53 - symbol:MUTYH "A/G-specific adenine DNA... 364 2.0e-33 1
TIGR_CMR|GSU_1613 - symbol:GSU_1613 "A/G-specific adenine... 331 6.2e-30 1
UNIPROTKB|O53574 - symbol:mutY "PROBABLE ADENINE GLYCOSYL... 309 1.3e-27 1
UNIPROTKB|Q5T418 - symbol:MUTYH "A/G-specific adenine DNA... 283 7.6e-25 1
TIGR_CMR|BA_1570 - symbol:BA_1570 "endonuclease III" spec... 197 2.8e-15 1
TIGR_CMR|CJE_0698 - symbol:CJE_0698 "endonuclease III" sp... 182 1.3e-13 1
UNIPROTKB|Q97QE0 - symbol:nth "Endonuclease III" species:... 179 2.9e-13 1
TIGR_CMR|DET_0935 - symbol:DET_0935 "endonuclease III" sp... 179 2.9e-13 1
TIGR_CMR|GSU_1450 - symbol:GSU_1450 "endonuclease III, pu... 170 2.8e-12 1
TIGR_CMR|CBU_1697 - symbol:CBU_1697 "endonuclease III" sp... 166 7.8e-12 1
TIGR_CMR|SO_2514 - symbol:SO_2514 "endonuclease III" spec... 168 1.4e-11 1
UNIPROTKB|P0AB83 - symbol:nth "endonuclease III; specific... 163 1.7e-11 1
UNIPROTKB|Q9KT92 - symbol:VC_1011 "Endonuclease III" spec... 156 9.8e-11 1
TIGR_CMR|CHY_1121 - symbol:CHY_1121 "endonuclease III" sp... 156 9.8e-11 1
TIGR_CMR|VC_1011 - symbol:VC_1011 "endonuclease III" spec... 156 9.8e-11 1
TIGR_CMR|APH_0897 - symbol:APH_0897 "endonuclease III" sp... 146 1.4e-08 1
TAIR|locus:2198738 - symbol:NTH2 "endonuclease III 2" spe... 152 4.8e-08 1
TIGR_CMR|SPO_3581 - symbol:SPO_3581 "endonuclease III" sp... 142 7.1e-08 1
UNIPROTKB|F1NQP6 - symbol:NTHL1 "Uncharacterized protein"... 138 5.8e-07 1
ZFIN|ZDB-GENE-120511-4 - symbol:nthl1 "nth endonuclease I... 142 7.0e-07 1
TAIR|locus:2061345 - symbol:ATNTH1 species:3702 "Arabidop... 141 8.1e-07 1
UNIPROTKB|H0YEI2 - symbol:MUTYH "A/G-specific adenine DNA... 128 1.1e-06 1
TIGR_CMR|ECH_0857 - symbol:ECH_0857 "endonuclease III" sp... 131 1.7e-06 1
UNIPROTKB|P63540 - symbol:nth "Endonuclease III" species:... 132 2.8e-06 1
DICTYBASE|DDB_G0277247 - symbol:apnB "putative endonuclea... 129 1.5e-05 1
UNIPROTKB|F1RFB3 - symbol:NTHL1 "Uncharacterized protein"... 128 1.6e-05 1
UNIPROTKB|P78549 - symbol:NTHL1 "Endonuclease III-like pr... 123 5.8e-05 1
UNIPROTKB|E2QX23 - symbol:NTHL1 "Uncharacterized protein"... 122 7.5e-05 1
POMBASE|SPAC30D11.07 - symbol:nth1 "DNA endonuclease III"... 123 7.5e-05 1
RGD|1309289 - symbol:Nthl1 "nth (endonuclease III)-like 1... 119 0.00015 1
MGI|MGI:1313275 - symbol:Nthl1 "nth (endonuclease III)-li... 117 0.00025 1
UNIPROTKB|H0YCY5 - symbol:MUTYH "A/G-specific adenine DNA... 111 0.00050 1
UNIPROTKB|Q2KID2 - symbol:NTHL1 "Endonuclease III-like pr... 112 0.00097 1
>TIGR_CMR|BA_0522 [details] [associations]
symbol:BA_0522 "A/G-specific adenine glycosylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
HSSP:P17802 OMA:QAVKPYF RefSeq:NP_843058.1 RefSeq:YP_017141.1
RefSeq:YP_026771.1 ProteinModelPortal:Q81YV8 SMR:Q81YV8
DNASU:1087779 EnsemblBacteria:EBBACT00000010013
EnsemblBacteria:EBBACT00000017545 EnsemblBacteria:EBBACT00000019690
GeneID:1087779 GeneID:2817839 GeneID:2853132 KEGG:ban:BA_0522
KEGG:bar:GBAA_0522 KEGG:bat:BAS0491 ProtClustDB:CLSK886914
BioCyc:BANT260799:GJAJ-534-MONOMER
BioCyc:BANT261594:GJ7F-559-MONOMER Uniprot:Q81YV8
Length = 365
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 134/346 (38%), Positives = 211/346 (60%)
Query: 13 FQESILTWYKQNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFA 72
FQ ++ W+++ R LPWR++ +PY VW+SE+MLQQT+V+ V PYY F+ +PT++ A
Sbjct: 14 FQNDLIGWFEKEQRDLPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLEALA 73
Query: 73 FDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALA 132
++ VLK WEGLGYYSR RN A ++V E +GG VP D K++ +KGVG YT GA+
Sbjct: 74 NADDEEVLKAWEGLGYYSRARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTKGAIL 133
Query: 133 SICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMD 192
SI Y IP PAVDGNV R+ R+ + DDI+K KT+ V+E +V + +S N FNQ LM+
Sbjct: 134 SIAYGIPEPAVDGNVVRVLSRILSVWDDIAKPKTRKVFEEIVREIISAENPSYFNQGLME 193
Query: 193 LGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVF-LLTVVVKTDTNKY 251
LGA +C+ KNP C CP+ C Y + PVK K K + ++ V++T+ +Y
Sbjct: 194 LGALICIPKNPACLLCPVREHCRGYAEGVQKELPVK-SKAKAPTMVPIVAGVLQTEDGRY 252
Query: 252 LIQKRPTTGLLSNFYMFLSFESDTPYTSQ----VEFLSENLPFKVNLNEKCLGNVKHVFS 307
+I KRP+TGLL+N + F + E +Q ++++ E +++ E + NV+H F+
Sbjct: 253 VINKRPSTGLLANMWEFPNVELGEGIRNQKEQLIDYMKEKFELSISIEEYAM-NVQHTFT 311
Query: 308 HLKWNMDVYSGTAKEKTIPANKTYKLITETQMKKYAFPVPYQKVWK 353
H W++ V+ G + + T K +++ ++ F ++ +++
Sbjct: 312 HRTWDIFVFYGKVTGDIVETD-TLKFVSKEAFEQLPFSKSHRTIYE 356
>DICTYBASE|DDB_G0270764 [details] [associations]
symbol:myh "monofunctional DNA glycosylase"
species:44689 "Dictyostelium discoideum" [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 SMART:SM00525
dictyBase:DDB_G0270764 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0006298
GO:GO:0004519 KO:K03575 eggNOG:COG1194 RefSeq:XP_001134477.1
ProteinModelPortal:Q1ZXP7 STRING:Q1ZXP7 EnsemblProtists:DDB0232996
GeneID:8617615 KEGG:ddi:DDB_G0270764 InParanoid:Q1ZXP7 OMA:RSIGANP
ProtClustDB:CLSZ2847450 Uniprot:Q1ZXP7
Length = 574
Score = 512 (185.3 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 98/219 (44%), Positives = 139/219 (63%)
Query: 8 KEILAFQESILTWYKQNARQLPWRESNNP-------YYVWISEVMLQQTQVKTVLPYYEK 60
+EI +ES+L WY++N R LPWR+ +N Y VW+SE+MLQQT+V TV+ Y+ K
Sbjct: 94 QEIQEIRESMLGWYEKNKRDLPWRKHDNSLDENVIAYRVWVSEIMLQQTRVATVIEYFNK 153
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+I+ +PTI D A T + V K+W GLGYY R +N G + V++ F ++P D K LL I
Sbjct: 154 WIEKWPTINDLASTTIEEVNKVWSGLGYYRRAKNLWLGSKYVVDNFNSKIPSDVKSLLEI 213
Query: 121 KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKT-KVVYETLVSKTMS 179
G+G YTAGA++SI +N P P VDGNV R+ R+ I + T K+ +E S
Sbjct: 214 NGIGPYTAGAISSIAFNKPVPLVDGNVIRVLSRVRSIGANPKLSSTVKLFWELGNDLVES 273
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
N FNQ+LM+LGAT+C ++P+CK+CP+ C AY+
Sbjct: 274 VENPCNFNQSLMELGATICSVQSPQCKQCPIQSNCQAYQ 312
Score = 77 (32.2 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 205 CKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVV-KTDTNKYLIQKRPTTGLLS 263
CK C S S ++ +P K+ KTK +D + ++ +T +N +L+ +RP TGLL+
Sbjct: 360 CKICQ-SFEDSDGPTESVCRYPKKVLKTKARDENVNVFLIHQTKSNLFLLTQRPDTGLLA 418
Query: 264 NFY 266
+ +
Sbjct: 419 SLF 421
Score = 57 (25.1 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 297 KCLGNVKHVFSHLKWNMDVYSGTA--KEKTIPANKT 330
K +G V H FSH+ + VY K++ IP +K+
Sbjct: 508 KSIGTVLHKFSHINQTLTVYDCPCDFKKEPIPNDKS 543
>RGD|620045 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005739
"mitochondrion" evidence=IEA;ISO;IDA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA;IDA] [GO:0032407 "MutSalpha complex binding"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0032405 "MutLalpha complex binding" evidence=ISO] [GO:0032406
"MutLbeta complex binding" evidence=ISO] [GO:0032408 "MutSbeta
complex binding" evidence=ISO] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
RGD:620045 GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 462 (167.7 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 94/219 (42%), Positives = 133/219 (60%)
Query: 9 EILAFQESILTWYKQNARQLPWR-----ESN---NPYYVWISEVMLQQTQVKTVLPYYEK 60
++ AF+ ++L+WY Q R LPWR E+N Y VW+SEVMLQQTQV TV+ YY +
Sbjct: 63 DVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRRAYAVWVSEVMLQQTQVATVIDYYTR 122
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG VPR + L +
Sbjct: 123 WMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQL 182
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI ++ T VDGNV R+ R+ I D + L + +
Sbjct: 183 LPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLWDLAQQLVD 242
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
+FNQA M+LGATVC + P C CP+ C A++
Sbjct: 243 PARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLCRAHQ 281
Score = 114 (45.2 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 46/173 (26%), Positives = 77/173 (44%)
Query: 198 CLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVK----TDTNKYLI 253
C +C+ C L N + NFP K + ++ + T VV+ T L+
Sbjct: 300 CALNTRQCQLC-LPSTNPWDPNMGVVNFPRKASRRPPREEYSATCVVEQPGATGGPLILL 358
Query: 254 QKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLP-FKVNLNE---KCLGNVKHVFSHL 309
+RP +GLL+ + F S + Q + L + L + L + LG V HVFSH+
Sbjct: 359 VQRPNSGLLAGLWEFPSVTLEPSGQHQHKALLQELQHWSAPLPTTPLQHLGEVIHVFSHI 418
Query: 310 KWNMDVYSGTAKEKTIPANKTY---KLITETQMKKYAFPVPYQKVWKLFTKSK 359
K VYS A E PA+ T + +T + + A +KV++++ + +
Sbjct: 419 KLTYQVYS-LALEGQTPASTTLPGARWLTWEEFRNAAVSTAMKKVFRVYEEHR 470
>UNIPROTKB|Q8R5G2 [details] [associations]
symbol:Mutyh "A/G-specific adenine DNA glycosylase"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 RGD:620045
GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 462 (167.7 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 94/219 (42%), Positives = 133/219 (60%)
Query: 9 EILAFQESILTWYKQNARQLPWR-----ESN---NPYYVWISEVMLQQTQVKTVLPYYEK 60
++ AF+ ++L+WY Q R LPWR E+N Y VW+SEVMLQQTQV TV+ YY +
Sbjct: 63 DVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRRAYAVWVSEVMLQQTQVATVIDYYTR 122
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG VPR + L +
Sbjct: 123 WMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQL 182
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI ++ T VDGNV R+ R+ I D + L + +
Sbjct: 183 LPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLWDLAQQLVD 242
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
+FNQA M+LGATVC + P C CP+ C A++
Sbjct: 243 PARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLCRAHQ 281
Score = 114 (45.2 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 46/173 (26%), Positives = 77/173 (44%)
Query: 198 CLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVK----TDTNKYLI 253
C +C+ C L N + NFP K + ++ + T VV+ T L+
Sbjct: 300 CALNTRQCQLC-LPSTNPWDPNMGVVNFPRKASRRPPREEYSATCVVEQPGATGGPLILL 358
Query: 254 QKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLP-FKVNLNE---KCLGNVKHVFSHL 309
+RP +GLL+ + F S + Q + L + L + L + LG V HVFSH+
Sbjct: 359 VQRPNSGLLAGLWEFPSVTLEPSGQHQHKALLQELQHWSAPLPTTPLQHLGEVIHVFSHI 418
Query: 310 KWNMDVYSGTAKEKTIPANKTY---KLITETQMKKYAFPVPYQKVWKLFTKSK 359
K VYS A E PA+ T + +T + + A +KV++++ + +
Sbjct: 419 KLTYQVYS-LALEGQTPASTTLPGARWLTWEEFRNAAVSTAMKKVFRVYEEHR 470
>MGI|MGI:1917853 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10090 "Mus
musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISO;TAS] [GO:0032407 "MutSalpha complex binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
MGI:MGI:1917853 GO:GO:0005739 GO:GO:0005634 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0006281
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GO:GO:0019104 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q EMBL:AY007717 EMBL:AB117938 EMBL:AL683847
EMBL:BC057942 IPI:IPI00620073 RefSeq:NP_001153053.1
RefSeq:NP_573513.2 UniGene:Mm.180333 ProteinModelPortal:Q99P21
SMR:Q99P21 STRING:Q99P21 PhosphoSite:Q99P21 PRIDE:Q99P21
Ensembl:ENSMUST00000102699 GeneID:70603 KEGG:mmu:70603
GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743 InParanoid:A2AGE3
OMA:HLGEVVH NextBio:331956 Bgee:Q99P21 CleanEx:MM_MUTYH
Genevestigator:Q99P21 GermOnline:ENSMUSG00000028687 Uniprot:Q99P21
Length = 515
Score = 459 (166.6 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 93/219 (42%), Positives = 133/219 (60%)
Query: 9 EILAFQESILTWYKQNARQLPWR-----ESNNP---YYVWISEVMLQQTQVKTVLPYYEK 60
++ AF+ ++L+WY Q R LPWR E+N+ Y VW+SEVMLQQTQV TV+ YY +
Sbjct: 63 DVTAFRSNLLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYTR 122
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +P ++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L +
Sbjct: 123 WMQKWPKLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQL 182
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI ++ T VDGNV R+ R+ I D + L + +
Sbjct: 183 LPGVGRYTAGAIASIAFDQVTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLVD 242
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
+FNQA M+LGATVC + P C CP+ C AY+
Sbjct: 243 PARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAYQ 281
Score = 97 (39.2 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 198 CLFKNPKCKECPLSRFCSAYKNNT-IENFPVKLGKTKVKDVFLLTVVVKTDTN----KYL 252
C +C+ C S S + + + NFP K + ++ + T VV+ L
Sbjct: 300 CALNTRQCQLCLTSS--SPWDPSMGVANFPRKASRRPPREEYSATCVVEQPGAIGGPLVL 357
Query: 253 IQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENL-----PFKVNLNEKCLGNVKHVFS 307
+ +RP +GLL+ + F S + Q + L + L P + + LG V H+FS
Sbjct: 358 LVQRPDSGLLAGLWEFPSVTLEPSEQHQHKALLQELQRWCGPLPA-IRLQHLGEVIHIFS 416
Query: 308 HLKWNMDVYS---GTAKEKTIPANKTYKLITETQMKKYAFPVPYQKVWKLFTKSK-GLKK 363
H+K VYS A T P + +T + A +KV++++ + G +K
Sbjct: 417 HIKLTYQVYSLALDQAPASTAPPGARW--LTWEEFCNAAVSTAMKKVFRMYEDHRQGTRK 474
>TIGR_CMR|CPS_4148 [details] [associations]
symbol:CPS_4148 "A/G-specific adenine glycosylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 RefSeq:YP_270802.1
ProteinModelPortal:Q47WM0 SMR:Q47WM0 STRING:Q47WM0 GeneID:3522464
KEGG:cps:CPS_4148 PATRIC:21471157 OMA:LPWRETY
BioCyc:CPSY167879:GI48-4160-MONOMER Uniprot:Q47WM0
Length = 362
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 116/317 (36%), Positives = 181/317 (57%)
Query: 5 LSAKEILAFQESILTWYK-QNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIK 63
+SAK F + +++WY Q + LPW++ PY VWISE+MLQQTQV TV+PYY++F++
Sbjct: 7 ISAKSAEQFGQQVVSWYHLQGRKHLPWQQDKTPYRVWISEIMLQQTQVATVIPYYQRFME 66
Query: 64 TYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGV 123
++PTI D A ED VL W GLGYY+R RN + ++ + G P + +Q++++ G+
Sbjct: 67 SFPTITDLANADEDVVLHHWTGLGYYARARNLHKSAKIMLNDYDGHFPIEIEQVIALPGI 126
Query: 124 GDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIE--DDISKGKTKVVYETLVSKTMSQT 181
G TAGA+ S+ P +DGNV R+ R + +E + +SK K +++ L K
Sbjct: 127 GRSTAGAILSLSLKQYHPILDGNVKRVLARSYLVEGYNGLSKFD-KALWQ-LSEKLTPAI 184
Query: 182 NAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLT 241
FNQA+MDLGATVC P C CP+ + C A + NFP K K K+ + +
Sbjct: 185 ETDSFNQAMMDLGATVCTRSKPSCDICPVEQSCLAKAGDQQMNFPQKKPKKKIPEKQTIM 244
Query: 242 VV--VKTDT-NKYLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKC 298
V+ +K + +K L++KRP G+ + F E D S++ L +L K ++ +
Sbjct: 245 VIPRLKNENCDKVLMEKRPPVGIWGGLWCF--HEVDE--LSEINDLMTSLSLK-EISSQT 299
Query: 299 LGNVKHVFSHLKWNMDV 315
L +H FSH +++D+
Sbjct: 300 LTEFRHTFSH--FHLDI 314
>UNIPROTKB|E2RG99 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104
GeneTree:ENSGT00510000047220 OMA:HLGEVVH TIGRFAMs:TIGR01084
EMBL:AAEX03009783 Ensembl:ENSCAFT00000007437 Uniprot:E2RG99
Length = 636
Score = 460 (167.0 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 93/219 (42%), Positives = 130/219 (59%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
E++AF+E++L WY + R LPWR Y VW+SEVMLQQTQV TV+ YY +
Sbjct: 178 EVMAFRENLLNWYDREKRDLPWRRLAEGEVDLDRRAYAVWVSEVMLQQTQVATVIDYYTR 237
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG VP + L +
Sbjct: 238 WMQKWPTLQDLAGASLEEVNQLWAGLGYYSRGRRLQQGARKVVEELGGHVPHTAETLQRL 297
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + T VDGNV R+ R+ I D S L + +
Sbjct: 298 LPGVGRYTAGAIASIAFGQATGVVDGNVIRVLCRVRAIGADSSSTLVSQHLWGLAQQLVD 357
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
+FNQA M+LGA VC ++P C +CP+ C AY+
Sbjct: 358 PARPGDFNQAAMELGALVCTPQHPHCSQCPVRSLCRAYQ 396
Score = 90 (36.7 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 36/146 (24%), Positives = 64/146 (43%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVVKTDTN----KYLIQKRPTTGLLSNFYMFLSFESDTPY 277
+ NFP K + ++ V++ + L+ +RP++GLL+ + F S ++
Sbjct: 441 VTNFPRKASRKPPREECSAICVLEQPRALGGPQILLVQRPSSGLLAGLWEFPSVTAEASG 500
Query: 278 TSQVEFLSENL-----PFKVNLNEKCLGNVKHVFSHLKWNMDVYSGTAKEKTIPANKT-- 330
Q E L + L P + + + LG V H FSH+K VY G A E P
Sbjct: 501 RCQREALLQELQSWAGPLPAS-HLQHLGQVVHTFSHIKLTYQVY-GLALEGQTPVTIVPP 558
Query: 331 -YKLITETQMKKYAFPVPYQKVWKLF 355
+ +T + A +KV++++
Sbjct: 559 GARWLTREEFHTAAISTAMKKVFRVY 584
>UNIPROTKB|E5KP25 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005634 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 EMBL:AL359540 KO:K03575 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 IPI:IPI00414236 RefSeq:NP_001121897.1
UniGene:Hs.271353 GeneID:4595 KEGG:hsa:4595 CTD:4595 HGNC:HGNC:7527
GenomeRNAi:4595 NextBio:17664 OMA:HLGEVVH SMR:E5KP25
Ensembl:ENST00000450313 UCSC:uc009vxp.3 Uniprot:E5KP25
Length = 549
Score = 452 (164.2 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 94/217 (43%), Positives = 127/217 (58%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
E+ AF+ S+L+WY Q R LPWR Y VW+SEVMLQQTQV TV+ YY
Sbjct: 92 EVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTG 151
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L +
Sbjct: 152 WMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQL 211
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + T VDGNV R+ R+ I D S L + +
Sbjct: 212 LPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVD 271
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSA 216
+FNQA M+LGATVC + P C +CP+ C A
Sbjct: 272 PARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 308
Score = 89 (36.4 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 36/145 (24%), Positives = 63/145 (43%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVVKTDTN---KYLIQKRPTTGLLSNFYMFLSFESDTPYT 278
+ NFP K + ++ T V++ + L+ +RP +GLL+ + F S +
Sbjct: 355 VVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQ 414
Query: 279 SQVEFLSENL-----PFKVNLNEKCLGNVKHVFSHLKWNMDVYSGTAKEKTIPANKT--- 330
Q + L + L P + + LG V H FSH+K VY G A E P
Sbjct: 415 LQRKALLQELQRWAGPLPAT-HLRHLGEVVHTFSHIKLTYQVY-GLALEGQTPVTTVPPG 472
Query: 331 YKLITETQMKKYAFPVPYQKVWKLF 355
+ +T+ + A +KV++++
Sbjct: 473 ARWLTQEEFHTAAVSTAMKKVFRVY 497
>UNIPROTKB|Q9UIF7 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=TAS] [GO:0032405 "MutLalpha complex binding"
evidence=IDA] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0032408 "MutSbeta complex binding" evidence=IDA] [GO:0032406
"MutLbeta complex binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006284 "base-excision
repair" evidence=TAS] [GO:0006285 "base-excision repair, AP site
formation" evidence=TAS] [GO:0045007 "depurination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] Reactome:REACT_216
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0045007 EMBL:CH471059 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0006298 GO:GO:0004519 MIM:613659 GO:GO:0016798
GO:GO:0032407 Orphanet:26106 EMBL:AL359540 KO:K03575 EMBL:U63329
EMBL:AB032920 EMBL:AB032921 EMBL:AB032922 EMBL:AB032923
EMBL:AB032924 EMBL:AB032925 EMBL:AB032926 EMBL:AB032927
EMBL:AB032928 EMBL:AB032929 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 EMBL:AF527839 EMBL:BC003178
IPI:IPI00414235 IPI:IPI00414236 IPI:IPI00414237 IPI:IPI00456700
IPI:IPI00746950 IPI:IPI00844241 RefSeq:NP_001041636.1
RefSeq:NP_001041637.1 RefSeq:NP_001041638.1 RefSeq:NP_001041639.1
RefSeq:NP_001121897.1 RefSeq:NP_036354.1 UniGene:Hs.271353 PDB:1X51
PDB:3N5N PDBsum:1X51 PDBsum:3N5N ProteinModelPortal:Q9UIF7
SMR:Q9UIF7 DIP:DIP-41972N IntAct:Q9UIF7 STRING:Q9UIF7
PhosphoSite:Q9UIF7 DMDM:48428272 PRIDE:Q9UIF7
Ensembl:ENST00000354383 Ensembl:ENST00000355498
Ensembl:ENST00000372098 Ensembl:ENST00000372100
Ensembl:ENST00000372104 Ensembl:ENST00000372110
Ensembl:ENST00000372115 Ensembl:ENST00000448481
Ensembl:ENST00000456914 GeneID:4595 KEGG:hsa:4595 UCSC:uc001cnf.3
UCSC:uc001cng.3 UCSC:uc001cnn.3 CTD:4595 GeneCards:GC01M045794
HGNC:HGNC:7527 HPA:HPA008732 MIM:604933 MIM:608456
neXtProt:NX_Q9UIF7 Orphanet:733 Orphanet:247798 PharmGKB:PA31328
eggNOG:COG1194 HOVERGEN:HBG052540 InParanoid:Q9UIF7
OrthoDB:EOG4HX50Q EvolutionaryTrace:Q9UIF7 GenomeRNAi:4595
NextBio:17664 ArrayExpress:Q9UIF7 Bgee:Q9UIF7 CleanEx:HS_MUTYH
Genevestigator:Q9UIF7 GermOnline:ENSG00000132781 Uniprot:Q9UIF7
Length = 546
Score = 452 (164.2 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 94/217 (43%), Positives = 127/217 (58%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
E+ AF+ S+L+WY Q R LPWR Y VW+SEVMLQQTQV TV+ YY
Sbjct: 89 EVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTG 148
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L +
Sbjct: 149 WMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQL 208
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + T VDGNV R+ R+ I D S L + +
Sbjct: 209 LPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVD 268
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSA 216
+FNQA M+LGATVC + P C +CP+ C A
Sbjct: 269 PARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 305
Score = 89 (36.4 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 36/145 (24%), Positives = 63/145 (43%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVVKTDTN---KYLIQKRPTTGLLSNFYMFLSFESDTPYT 278
+ NFP K + ++ T V++ + L+ +RP +GLL+ + F S +
Sbjct: 352 VVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQ 411
Query: 279 SQVEFLSENL-----PFKVNLNEKCLGNVKHVFSHLKWNMDVYSGTAKEKTIPANKT--- 330
Q + L + L P + + LG V H FSH+K VY G A E P
Sbjct: 412 LQRKALLQELQRWAGPLPAT-HLRHLGEVVHTFSHIKLTYQVY-GLALEGQTPVTTVPPG 469
Query: 331 YKLITETQMKKYAFPVPYQKVWKLF 355
+ +T+ + A +KV++++
Sbjct: 470 ARWLTQEEFHTAAVSTAMKKVFRVY 494
>ZFIN|ZDB-GENE-081104-193 [details] [associations]
symbol:mutyh "mutY homolog (E. coli)" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-081104-193 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743
OMA:HLGEVVH EMBL:CT025742 IPI:IPI00900622 RefSeq:XP_686698.2
UniGene:Dr.74965 STRING:B8JJK1 Ensembl:ENSDART00000114177
GeneID:558403 KEGG:dre:558403 NextBio:20882452 Uniprot:B8JJK1
Length = 526
Score = 447 (162.4 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 91/220 (41%), Positives = 131/220 (59%)
Query: 9 EILAFQESILTWYKQNARQLPWR------ESNN--PYYVWISEVMLQQTQVKTVLPYYEK 60
EI F+ ++ WY +N R+LPWR + +N Y VW+SE+MLQQTQV TV+ YY +
Sbjct: 55 EISVFRSDLMKWYDENKRELPWRTLATTEQDDNIRTYAVWVSEIMLQQTQVATVIDYYNR 114
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLS- 119
++K +PT++ A T + V +MW GLGYYSR R G ++V+ + G++P+ LL
Sbjct: 115 WMKRWPTVEKLAAATLEEVNQMWSGLGYYSRGRRLHEGAQKVVSELDGQMPKTTAGLLKQ 174
Query: 120 IKGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEI-EDDISKGKTKVVYETLVSKTM 178
+ GVG YTAGA+ SI T AVDGNV R+ R+ I D S T ++ + +
Sbjct: 175 LPGVGRYTAGAIGSIALGQVTGAVDGNVIRVLCRVRAIGADSSSPAVTDALWR-IADALV 233
Query: 179 SQTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
+FNQA+M+LGA VC K+P C +CP+ C A+K
Sbjct: 234 DPERPGDFNQAMMELGARVCTPKSPVCSQCPIQTHCHAFK 273
Score = 94 (38.1 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 35/152 (23%), Positives = 74/152 (48%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVVKT----DTNKYLIQKRPTTGLLSNFY----MFLSFE- 272
++N+P K K + LT +V+ + ++YL+ +RP+ GLL+ + + L +
Sbjct: 324 VQNYPRKPVKKAPRVEQTLTCIVEHQRAGEESEYLLTQRPSKGLLAGMWELPSVLLQADI 383
Query: 273 SDTPYTSQV-EFLSENLPFKVNLNE-KCLGNVKHVFSHLKWNMDVYSGTAKEKTIPANKT 330
S+ Y + + + + L ++ + + +G V H+FSH+ V+S + + K
Sbjct: 384 SENKYKELICDMMQKWLETPLDTHSVQFVGEVVHIFSHIHQTYIVFSVHVSDCSDREQKQ 443
Query: 331 YKL-ITETQMKKYAFPVPYQKVWKLFTKSKGL 361
+T++ ++K A +K+ KL+ S L
Sbjct: 444 KTCWLTKSALQKAAVSTGVKKIMKLYESSSKL 475
>UNIPROTKB|F1S368 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00293 Pfam:PF00730 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:CU657926
Ensembl:ENSSSCT00000004334 Uniprot:F1S368
Length = 524
Score = 455 (165.2 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 94/219 (42%), Positives = 136/219 (62%)
Query: 9 EILAFQESILTWYKQNARQLPWR---ESN-NP----YYVWISEVMLQQTQVKTVLPYYEK 60
E+ AF++S+L+WY + R LPWR ES +P Y VW+SEVMLQQTQV TV+ YY +
Sbjct: 66 EVTAFRKSLLSWYDREKRDLPWRRLAESEVDPDRRAYAVWVSEVMLQQTQVATVINYYTR 125
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++T+PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L +
Sbjct: 126 WMQTWPTLRDLASASLEEVNQLWAGLGYYSRGRWLQTGARKVVEELGGHMPRTAETLQRL 185
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + + GNVFR+ R+ I D +L + +
Sbjct: 186 LPGVGRYTAGAIASIAFGQAAGVMYGNVFRVLCRVRAIGADPRSTLVSQQLWSLAQQLVD 245
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYK 218
+FNQA M+LGATVC ++P C +CP+ C A++
Sbjct: 246 PARPGDFNQAAMELGATVCTPQHPLCSQCPVQSLCRAHQ 284
Score = 85 (35.0 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 35/146 (23%), Positives = 63/146 (43%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVVKTDTN----KYLIQKRPTTGLLSNFYMFLSFESDTPY 277
+ NFP K + ++ V++ + L+ +RP +GLL+ + F S ++
Sbjct: 329 VANFPRKANRKPPREESSAICVLEQPRAFGGARLLLVQRPNSGLLAGLWEFPSVAAEPSE 388
Query: 278 TSQVEFLSENLPFKVN----LNEKCLGNVKHVFSHLKWNMDVYSGTAKEKT----IPANK 329
Q L + L V + LG V H FSH+K VY E+T +PA+
Sbjct: 389 QLQCTALLQELQNWVGPLPATRLQHLGEVVHSFSHIKLTYHVYGLALDEQTPVTVLPADA 448
Query: 330 TYKLITETQMKKYAFPVPYQKVWKLF 355
+ +T + A +KV++++
Sbjct: 449 RW--LTREEFHAAAVSTAMKKVFRVY 472
>UNIPROTKB|E1BZT8 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00595820
ProteinModelPortal:E1BZT8 Ensembl:ENSGALT00000016624 Uniprot:E1BZT8
Length = 461
Score = 434 (157.8 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 97/242 (40%), Positives = 139/242 (57%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
EI A + +L WY ++ R LPWR Y VW+SE+MLQQTQV TV+ YY +
Sbjct: 54 EIDALRGRLLAWYDKSRRDLPWRTLAAAELDADRRAYAVWVSEIMLQQTQVATVIDYYNR 113
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++ A + + V ++W GLGYYSR + Q R+V+ + G +PR + L +
Sbjct: 114 WMQKWPTLQALAAASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPRTAEDLQRL 173
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + T VDGNV R+ RL I D S + + +
Sbjct: 174 LPGVGRYTAGAIASISFGQATGVVDGNVIRVLCRLRCIGADTSSLAVIDCLWDMANTLVD 233
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKN--NTIENFPVKL-GKTK-VK 235
++ +FNQALM+LGATVC K+P C+ECP+ C A++ + + KL GKT V
Sbjct: 234 RSRPGDFNQALMELGATVCTPKSPLCRECPVKEHCHAWRRVEKELASASQKLFGKTTLVP 293
Query: 236 DV 237
DV
Sbjct: 294 DV 295
Score = 98 (39.6 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 38/143 (26%), Positives = 62/143 (43%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVV----KTDTNKYLIQKRPTTGLLSNFYMF--LSFESDT 275
+ NFP K K + + + T V+ + +YLI +RP++GLL+ + F L
Sbjct: 319 VTNFPRKAAKKQPRVEWTATCVLERRGRLGAPEYLIVQRPSSGLLAGLWEFPSLPLAPGL 378
Query: 276 PYTSQVEFLSENLPF----KVNLNEKC-LGNVKHVFSHLKWNMDVYSGTAKEKTI--PAN 328
Q E L+++L V C +G V H+FSH+ VYS A+
Sbjct: 379 QEEQQKEVLADHLRAWTRQPVQTQSLCFIGEVVHIFSHIHQTYVVYSLCLDGDVALDAAS 438
Query: 329 KTYKLITETQMKKYAFPVPYQKV 351
+ +TE + + A +KV
Sbjct: 439 SPSRWVTEEEFRASAVSTAMKKV 461
>UNIPROTKB|F1P514 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00821549
Ensembl:ENSGALT00000038451 Uniprot:F1P514
Length = 398
Score = 434 (157.8 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 97/242 (40%), Positives = 139/242 (57%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
EI A + +L WY ++ R LPWR Y VW+SE+MLQQTQV TV+ YY +
Sbjct: 8 EIDALRGRLLAWYDKSRRDLPWRTLAAAELDADRRAYAVWVSEIMLQQTQVATVIDYYNR 67
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++ A + + V ++W GLGYYSR + Q R+V+ + G +PR + L +
Sbjct: 68 WMQKWPTLQALAAASLEEVNELWAGLGYYSRGKRLQEAARKVVSELAGRMPRTAEDLQRL 127
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + T VDGNV R+ RL I D S + + +
Sbjct: 128 LPGVGRYTAGAIASISFGQATGVVDGNVIRVLCRLRCIGADTSSLAVIDCLWDMANTLVD 187
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKN--NTIENFPVKL-GKTK-VK 235
++ +FNQALM+LGATVC K+P C+ECP+ C A++ + + KL GKT V
Sbjct: 188 RSRPGDFNQALMELGATVCTPKSPLCRECPVKEHCHAWRRVEKELASASQKLFGKTTLVP 247
Query: 236 DV 237
DV
Sbjct: 248 DV 249
Score = 96 (38.9 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 222 IENFPVKLGKTKVKDVFLLTVVV----KTDTNKYLIQKRPTTGLLSNFYMF--LSFESDT 275
+ NFP K K + + + T V+ + +YLI +RP++GLL+ + F L
Sbjct: 273 VTNFPRKAAKKQPRVEWTATCVLERRGRLGAPEYLIVQRPSSGLLAGLWEFPSLPLAPGL 332
Query: 276 PYTSQVEFLSENLPF----KVNLNEKC-LGNVKHVFSHLKWNMDVYS 317
Q E L+++L V C +G V H+FSH+ VYS
Sbjct: 333 QEEQQKEVLADHLRAWTRQPVQTQSLCFIGEVVHIFSHIHQTYVVYS 379
>UNIPROTKB|Q9KUR3 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 108/305 (35%), Positives = 166/305 (54%)
Query: 13 FQESILTWYKQNARQ-LPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDF 71
F ++ILTWY R+ LPW+++ N Y VW+SE+MLQQTQV TV+PY+E+F++ +PT+
Sbjct: 4 FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
Query: 72 AFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGAL 131
A +D VL W GLGYY+R RN + V+ ++GGE P D +Q+ ++ GVG TA A+
Sbjct: 64 AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
Query: 132 ASICYNIPTPAVDGNVFRIYGRLFEIED-DISKGKTKVVYETLVSKTMSQTNAREFNQAL 190
S Y P +DGNV R R F +E K ++ T + + ++NQA+
Sbjct: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHT-PKVDVDKYNQAM 182
Query: 191 MDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVKTDTNK 250
MD+GA +C PKC CP+ FC A + + +P K KT K V V+ N
Sbjct: 183 MDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTD-KPVKATWFVMLYHDNA 241
Query: 251 YLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKCLGNVKHVFSHLK 310
+++RP +G+ Y F E T+ ++ + ++K L +H FSH
Sbjct: 242 VWLEQRPQSGIWGGLYCFPQSEIANIQTT-ID--QRAIGDSTITSQKTLIAFRHTFSH-- 296
Query: 311 WNMDV 315
+++D+
Sbjct: 297 YHLDI 301
>TIGR_CMR|VC_0452 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 108/305 (35%), Positives = 166/305 (54%)
Query: 13 FQESILTWYKQNARQ-LPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDF 71
F ++ILTWY R+ LPW+++ N Y VW+SE+MLQQTQV TV+PY+E+F++ +PT+
Sbjct: 4 FAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHAL 63
Query: 72 AFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGAL 131
A +D VL W GLGYY+R RN + V+ ++GGE P D +Q+ ++ GVG TA A+
Sbjct: 64 AAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAV 123
Query: 132 ASICYNIPTPAVDGNVFRIYGRLFEIED-DISKGKTKVVYETLVSKTMSQTNAREFNQAL 190
S Y P +DGNV R R F +E K ++ T + + ++NQA+
Sbjct: 124 LSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHT-PKVDVDKYNQAM 182
Query: 191 MDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVKTDTNK 250
MD+GA +C PKC CP+ FC A + + +P K KT K V V+ N
Sbjct: 183 MDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTD-KPVKATWFVMLYHDNA 241
Query: 251 YLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKCLGNVKHVFSHLK 310
+++RP +G+ Y F E T+ ++ + ++K L +H FSH
Sbjct: 242 VWLEQRPQSGIWGGLYCFPQSEIANIQTT-ID--QRAIGDSTITSQKTLIAFRHTFSH-- 296
Query: 311 WNMDV 315
+++D+
Sbjct: 297 YHLDI 301
>TAIR|locus:2135828 [details] [associations]
symbol:AT4G12740 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00278
SMART:SM00478 EMBL:CP002687 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AL049640 EMBL:AL161534 IPI:IPI00528123 PIR:T06632
RefSeq:NP_193010.2 UniGene:At.54294 ProteinModelPortal:F4JRF4
SMR:F4JRF4 PRIDE:F4JRF4 EnsemblPlants:AT4G12740.1 GeneID:826886
KEGG:ath:AT4G12740 GeneFarm:2854 TAIR:At4g12740 KO:K03575
OMA:FWKLAAQ Uniprot:F4JRF4
Length = 630
Score = 319 (117.4 bits), Expect = 9.6e-48, Sum P(3) = 9.6e-48
Identities = 74/205 (36%), Positives = 109/205 (53%)
Query: 79 VLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNI 138
V +MW GLGYY R R G + V+ G P L+ +KG+G YTAGA+ASI +N
Sbjct: 223 VNEMWAGLGYYRRARFLLEGAKMVVAGTEG-FPNQASSLMKVKGIGQYTAGAIASIAFNE 281
Query: 139 PTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVC 198
P VDGNV R+ RL I + T + L ++ + + +FNQ+LM+LGAT+C
Sbjct: 282 AVPVVDGNVIRVLARLKAISANPKDRLTARNFWKLAAQLVDPSRPGDFNQSLMELGATLC 341
Query: 199 LFKNPKCKECPLSRFCSAY----KNNTIE--NFPVKLGKTKVKDVFLLTVVVKT---DTN 249
P C CP+S C A+ +N TI ++P K+ K K + F V++ + N
Sbjct: 342 TVSKPSCSSCPVSSQCRAFSLSEENRTISVTDYPTKVIKAKPRHDFCCVCVLEIHNLERN 401
Query: 250 ----KYLIQKRPTTGLLSNFYMFLS 270
++++ KRP GLL+ + F S
Sbjct: 402 QSGGRFVLVKRPEQGLLAGLWEFPS 426
Score = 160 (61.4 bits), Expect = 9.6e-48, Sum P(3) = 9.6e-48
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 6 SAKEILAFQESILTWYKQNARQLPWR----ESNNP---YYVWISEVMLQQTQVKTVLPYY 58
S E + +L WY N R LPWR ES Y VW+SE+MLQQT+V+TV+ YY
Sbjct: 124 SENETQKIRMGLLDWYDVNKRDLPWRNRRSESEKERRAYEVWVSEIMLQQTRVQTVMKYY 183
Query: 59 EKFIKTYPTIKDFAFDTEDNVL 80
+++++ +PTI D + +N++
Sbjct: 184 KRWMQKWPTIYDLGQASLENLI 205
Score = 70 (29.7 bits), Expect = 9.6e-48, Sum P(3) = 9.6e-48
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 250 KYLIQKRPTTGLLSNFYMF----LSFESDTPYTSQV--EFLSENLPFKVNLNEKC----- 298
++++ KRP GLL+ + F L+ E+D+ +L E F V L + C
Sbjct: 406 RFVLVKRPEQGLLAGLWEFPSVILNEEADSATRRNAINVYLKEAFRFHVELKKACTIVSR 465
Query: 299 --LGNVKHVFSHLK 310
LG H+F+H++
Sbjct: 466 EELGEFVHIFTHIR 479
Score = 37 (18.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 159 DDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSRFC---S 215
+D+ KG+ K +TL K +S + L LG T + K P + + R
Sbjct: 496 EDLFKGQAK---DTLTWKCVS-------SDVLSTLGLTSAVRKVPPFRLQHIKRLSLDVM 545
Query: 216 AYKNNTIENFPVK-LGKTKVKDVFLLTVVVKTDTNKYLIQKRPTTGLLSNFYMFLSFES 273
K +E ++ L T +FL++ ++ Y + LL+ F+M LSF S
Sbjct: 546 VEKEQILECRCIQWLKHTSKAYLFLMSHQIE---QPYRGNENSHDLLLTLFFMLLSFYS 601
>UNIPROTKB|F1N4K4 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:DAAA02009006
IPI:IPI00703676 UniGene:Bt.38838 Ensembl:ENSBTAT00000014928
NextBio:20870678 Uniprot:F1N4K4
Length = 526
Score = 426 (155.0 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 90/217 (41%), Positives = 123/217 (56%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
E+ A QES+L WY + R LPWR Y V ++VMLQQTQV TV+ YY +
Sbjct: 66 EVTALQESLLDWYDRKKRDLPWRRLVEDEVDLDRRAYAVCFTDVMLQQTQVATVINYYTR 125
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLS- 119
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L
Sbjct: 126 WMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRWLQEGARKVVEELGGHMPRTAETLQQF 185
Query: 120 IKGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
+ GVG YTAGA+ASI + VDGNV R+ R+ I D S +L + +
Sbjct: 186 LPGVGRYTAGAIASIAFGQAAGVVDGNVIRVLCRVRAIGADSSSTLVSQHLWSLAQQLVD 245
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSA 216
+FNQA M+LGA VC K P C CP+ C A
Sbjct: 246 PARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLCRA 282
Score = 85 (35.0 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 41/169 (24%), Positives = 71/169 (42%)
Query: 203 PKCKECPLSRFCSAYKNNT--IENFPVKLGKTKVKDVFLLTVVVKTDTN----KYLIQKR 256
P +CPL + + T + NFP K + ++ V++ L+ +R
Sbjct: 308 PNTGQCPLCAPPTEPWDQTLGVTNFPRKASRKPPREECSAICVLEQPKALGGAHILLVQR 367
Query: 257 PTTGLLSNFYMF--LSFESDTPYTSQVEFLSENLPFKVN-LNE---KCLGNVKHVFSHLK 310
P +GLL+ + F +S ++ Q L + L V L + + LG V H FSH+K
Sbjct: 368 PNSGLLAGLWEFPSVSVNAEASGQHQRAALLQELQSWVGPLPDTRLQHLGQVVHTFSHIK 427
Query: 311 WNMDVYSGTAKEKT----IPANKTYKLITETQMKKYAFPVPYQKVWKLF 355
VYS +E T +P + +T A +KV++++
Sbjct: 428 MTYQVYSLALEEHTPVTIVPPGARW--LTREDFHTAAVSTAMKKVFRMY 474
>TIGR_CMR|SO_3368 [details] [associations]
symbol:SO_3368 "A/G-specific adenine glycosylase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744
OMA:FHLDIQP HSSP:P17802 RefSeq:NP_718922.1
ProteinModelPortal:Q8EBX7 SMR:Q8EBX7 GeneID:1171048
KEGG:son:SO_3368 PATRIC:23526410 ProtClustDB:CLSK907131
Uniprot:Q8EBX7
Length = 365
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 102/309 (33%), Positives = 168/309 (54%)
Query: 8 KEILAFQESILTWYKQNARQ-LPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYP 66
K +F I+ WY + R+ LPW++ PY VW+SE+MLQQTQV TV+PYY++F++ +P
Sbjct: 2 KSTASFATRIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFP 61
Query: 67 TIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDY 126
+ A +D VL W GLGYY+R RN + + +++ G+ P D +Q+L++ G+G
Sbjct: 62 NVLALANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRS 121
Query: 127 TAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREF 186
TAGA+ S+ P +DGNV R+ R IE + + L + Q + +++
Sbjct: 122 TAGAVLSLSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKY 181
Query: 187 NQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVKT 246
NQA+MD+GA++C P C CP++ C A +FP K K + + +V+
Sbjct: 182 NQAMMDIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEKSAWMLVLFK 241
Query: 247 DTNKYLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKCLGNVKHVF 306
D N+ + KRP G+ + F F S+ +++E P ++ E +G +H F
Sbjct: 242 D-NQVFLAKRPPAGIWGGLWCFPEFSSEAALNTELEAQGYQ-PTQL---EPLIG-FRHTF 295
Query: 307 SHLKWNMDV 315
SH +++D+
Sbjct: 296 SH--FHLDI 302
>UNIPROTKB|P17802 [details] [associations]
symbol:mutY "adenine glycosylase; G.C --> T.A
transversions" species:83333 "Escherichia coli K-12" [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016798 "hydrolase activity, acting on
glycosyl bonds" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;IDA] [GO:0006284 "base-excision repair"
evidence=IEA;IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 GO:GO:0016787 DrugBank:DB00173
EMBL:U28377 GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 EMBL:X52391 EMBL:M59471 PIR:B38535
RefSeq:NP_417436.1 RefSeq:YP_491160.1 PDB:1KG2 PDB:1KG3 PDB:1KG4
PDB:1KG5 PDB:1KG6 PDB:1KG7 PDB:1KQJ PDB:1MUD PDB:1MUN PDB:1MUY
PDB:1WEF PDB:1WEG PDB:1WEI PDBsum:1KG2 PDBsum:1KG3 PDBsum:1KG4
PDBsum:1KG5 PDBsum:1KG6 PDBsum:1KG7 PDBsum:1KQJ PDBsum:1MUD
PDBsum:1MUN PDBsum:1MUY PDBsum:1WEF PDBsum:1WEG PDBsum:1WEI
ProteinModelPortal:P17802 SMR:P17802 DIP:DIP-10289N IntAct:P17802
MINT:MINT-1240449 PRIDE:P17802 EnsemblBacteria:EBESCT00000003975
EnsemblBacteria:EBESCT00000004732 EnsemblBacteria:EBESCT00000004734
EnsemblBacteria:EBESCT00000004736 EnsemblBacteria:EBESCT00000018160
EnsemblBacteria:EBESCT00000232596 EnsemblBacteria:EBESCT00000232600
GeneID:12933365 GeneID:947447 KEGG:ecj:Y75_p2891 KEGG:eco:b2961
PATRIC:32121336 EchoBASE:EB0622 EcoGene:EG10627
HOGENOM:HOG000028744 OMA:FHLDIQP ProtClustDB:PRK10880
BioCyc:EcoCyc:EG10627-MONOMER BioCyc:ECOL316407:JW2928-MONOMER
EvolutionaryTrace:P17802 Genevestigator:P17802 Uniprot:P17802
Length = 350
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 107/304 (35%), Positives = 164/304 (53%)
Query: 13 FQESILTWYKQNARQ-LPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDF 71
F +L WY + R+ LPW+ PY VW+SEVMLQQTQV TV+PY+E+F+ +PT+ D
Sbjct: 6 FSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDL 65
Query: 72 AFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGAL 131
A D VL +W GLGYY+R RN +QV GG+ P +++ ++ GVG TAGA+
Sbjct: 66 ANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAI 125
Query: 132 ASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALM 191
S+ P +DGNV R+ R + + K + + +L + FNQA+M
Sbjct: 126 LSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMM 185
Query: 192 DLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVKTDTNKY 251
DLGA +C PKC CPL C A NN+ +P K K + + ++++ + ++
Sbjct: 186 DLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPKQTLPERTGYFLLLQHE-DEV 244
Query: 252 LIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKCLGNVKHVFSHLKW 311
L+ +RP +GL Y F F + S ++L++ NL + L +H FSH +
Sbjct: 245 LLAQRPPSGLWGGLYCFPQFADEE---SLRQWLAQRQIAADNLTQ--LTAFRHTFSH--F 297
Query: 312 NMDV 315
++D+
Sbjct: 298 HLDI 301
>TIGR_CMR|CBU_0940 [details] [associations]
symbol:CBU_0940 "A/G-specific adenine glycosylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519 GO:GO:0019104
KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 OMA:FHLDIQP
HSSP:P17802 RefSeq:NP_819952.1 ProteinModelPortal:Q83D07 SMR:Q83D07
GeneID:1208834 KEGG:cbu:CBU_0940 PATRIC:17930589
ProtClustDB:CLSK914429 BioCyc:CBUR227377:GJ7S-932-MONOMER
Uniprot:Q83D07
Length = 354
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 99/303 (32%), Positives = 161/303 (53%)
Query: 13 FQESILTWYKQNARQ-LPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDF 71
F + +L W+ + R LPW++ PY VW+SE+MLQQTQV TV+PY+E+FIK +PT+
Sbjct: 6 FAQGVLRWFDRYGRHDLPWQKKLTPYRVWVSEIMLQQTQVSTVIPYFERFIKRFPTVGAL 65
Query: 72 AFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGAL 131
A D +L W GLGYY+R RN + + + G P + L S+ G+G TAGA+
Sbjct: 66 ALAPLDEILAHWSGLGYYARARNLHRAAQIIHVTYHGRFPSTVETLSSLPGIGRSTAGAV 125
Query: 132 ASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALM 191
S+ + +DGNV R+ R ++ I++ + +L K + ++NQA+M
Sbjct: 126 LSLGMHQYAVILDGNVKRVLARYNALDVPINQQVGINILWSLAEKYTPKNRCWDYNQAMM 185
Query: 192 DLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVVKTDTNKY 251
D+GA +C PKC CPL C A++ + NFP+K KT ++++ +
Sbjct: 186 DIGAMICTRTKPKCSLCPLKSSCKAHRLSQQMNFPIKKAKTARAQKAAYLLLLRNSRGEI 245
Query: 252 LIQKRPTTGLLSNFYMFLSFESDTPYTSQVE-FLSENLPFKVNLNEKCLGNVKHVFSHLK 310
L++KRP TG+ + F P ++ + L F+ + E+ ++ H FSH +
Sbjct: 246 LLEKRPPTGIWGGLWSF----PQCPIEEDIDKWCQTKLGFEAVICERW-NSIFHQFSHFE 300
Query: 311 WNM 313
+ +
Sbjct: 301 FEI 303
>TIGR_CMR|CJE_1792 [details] [associations]
symbol:CJE_1792 "A/G-specific adenine glycosylase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0019104 KO:K03575
eggNOG:COG1194 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
RefSeq:YP_179763.1 ProteinModelPortal:Q5HSH2 STRING:Q5HSH2
GeneID:3232419 KEGG:cjr:CJE1792 PATRIC:20045396 OMA:WQGAGYY
ProtClustDB:CLSK879335 BioCyc:CJEJ195099:GJC0-1822-MONOMER
Uniprot:Q5HSH2
Length = 339
Score = 432 (157.1 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 108/297 (36%), Positives = 165/297 (55%)
Query: 5 LSAKEILAFQESILTWYKQNARQ-LPWR--ESNN----------PYYVWISEVMLQQTQV 51
+ KE+ QE++L WY++N R+ LPWR +S N Y V+ISE+MLQQTQV
Sbjct: 1 MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQV 60
Query: 52 KTVLP-YYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEV 110
K+VL +Y F++ +PT++ A ED +LK W+GLGYY+R RN + + +++F ++
Sbjct: 61 KSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRARNLKKAALECVDKFEAKL 120
Query: 111 PRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVY 170
P++ + L + G+G YTAGA+A Y+ VDGN+ R+ RLF +E+ K K
Sbjct: 121 PKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLFALENPSMKELEKRAK 180
Query: 171 ETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLG 230
E L + +A + NQAL+D+GA VC+ KN KC CPL FC K +T E +P +
Sbjct: 181 ELL-----NLNHAFDHNQALLDIGALVCVSKNAKCGICPLYDFCQG-KFHT-ELYP-RAK 232
Query: 231 KTKVKDVFLLTVVVKTDTNKYLIQKRPTTGLLSNFYMFLSF-ESDTPYTSQVEFLSE 286
K + V L + + + K+ I + L Y F F E + + + F+ E
Sbjct: 233 KILYESVNLNLFLFEFN-KKFAIGQSQDK-LYKGMYNFPFFKEGEYKLSKDMGFVGE 287
Score = 52 (23.4 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 283 FLSENLPFKVNLNEKCLGNVKHVFSHLKWNMDVYSGTAKEKTIPANKTYKLITETQMKKY 342
F E +K++ + +G KH ++ K N+ VY + NK Y+ T +++
Sbjct: 270 FFKEG-EYKLSKDMGFVGEFKHSYTKYKLNIKVYHQILNNE----NKNYEFKTLKELEST 324
Query: 343 AFPVPYQKVWKL 354
A K KL
Sbjct: 325 ALSALSLKALKL 336
>UNIPROTKB|Q5T413 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519 EMBL:AL359540
UniGene:Hs.271353 HGNC:HGNC:7527 HOVERGEN:HBG052540
HOGENOM:HOG000028743 IPI:IPI00975588 SMR:Q5T413 STRING:Q5T413
Ensembl:ENST00000435155 Uniprot:Q5T413
Length = 291
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 94/217 (43%), Positives = 127/217 (58%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
E+ AF+ S+L+WY Q R LPWR Y VW+SEVMLQQTQV TV+ YY
Sbjct: 75 EVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTG 134
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L +
Sbjct: 135 WMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQL 194
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMS 179
GVG YTAGA+ASI + T VDGNV R+ R+ I D S L + +
Sbjct: 195 LPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVD 254
Query: 180 QTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSA 216
+FNQA M+LGATVC + P C +CP+ C A
Sbjct: 255 PARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA 291
>POMBASE|SPAC26A3.02 [details] [associations]
symbol:myh1 "adenine DNA glycosylase Myh1" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0000701 "purine-specific mismatch base pair DNA
N-glycosylase activity" evidence=IMP] [GO:0000702 "oxidized base
lesion DNA N-glycosylase activity" evidence=TAS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006281 "DNA repair"
evidence=IC] [GO:0006284 "base-excision repair" evidence=IC]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA] [GO:0034644
"cellular response to UV" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISM] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478
SMART:SM00525 PomBase:SPAC26A3.02 GO:GO:0005634 GO:GO:0000077
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0034644 GO:GO:0004519 KO:K03575 eggNOG:COG1194
EMBL:AF053340 PIR:T38390 PIR:T43679 RefSeq:NP_594145.1
ProteinModelPortal:Q10159 IntAct:Q10159 MINT:MINT-1209697
STRING:Q10159 EnsemblFungi:SPAC26A3.02.1 GeneID:2542727
KEGG:spo:SPAC26A3.02 OMA:MVRAFKE OrthoDB:EOG4HDX3M NextBio:20803772
GO:GO:0000702 GO:GO:0000701 Uniprot:Q10159
Length = 461
Score = 402 (146.6 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 95/291 (32%), Positives = 147/291 (50%)
Query: 17 ILTWYKQN----ARQLPWRESNNP----YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTI 68
IL W K+ + P + P Y V +SE+MLQQT+V+TV YY K+++T PT+
Sbjct: 35 ILPWRKKECIPPSEDSPLEDWEQPVQRLYEVLVSEIMLQQTRVETVKRYYTKWMETLPTL 94
Query: 69 KDFAFDTEDN--VLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLS-IKGVGD 125
K A + E N V+ +W G+G+Y+R + C+ + + E+PR + I GVG
Sbjct: 95 KSCA-EAEYNTQVMPLWSGMGFYTRCKRLHQACQHLAKLHPSEIPRTGDEWAKGIPGVGP 153
Query: 126 YTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNARE 185
YTAGA+ SI + PT VDGNV R+ R I D SKGK + L ++ + +
Sbjct: 154 YTAGAVLSIAWKQPTGIVDGNVIRVLSRALAIHSDCSKGKANALIWKLANELVDPVRPGD 213
Query: 186 FNQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTI--ENFPVKLGKTKVK-DVFLLTV 242
FNQALM+LGA C ++P+C CP+S C AY+ + + +K V ++ + +
Sbjct: 214 FNQALMELGAITCTPQSPRCSVCPISEICKAYQEQNVIRDGNTIKYDIEDVPCNICITDI 273
Query: 243 VVKTDTNKYLIQKRPT----TGLLSNFYMFLSFESDTPYTSQVEFLSENLP 289
K D +++ + P T + + F+ P T + FL P
Sbjct: 274 PSKEDLQNWVVARYPVHPAKTKQREERALVVIFQKTDPSTKEKFFLIRKRP 324
Score = 99 (39.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 218 KNNTIENFPVKLGKTKVKDVFLLTVVV-KTDTNK----YLIQKRPTTGLLSNFYMF--LS 270
+N + +PV KTK ++ L V+ KTD + +LI+KRP+ GLL+ + F +
Sbjct: 280 QNWVVARYPVHPAKTKQREERALVVIFQKTDPSTKEKFFLIRKRPSAGLLAGLWDFPTIE 339
Query: 271 FESDT-PYTSQVEFLSENLPFKVNLNEKCL------GNVKHVFSHLKWNMDVYSGTAKEK 323
F ++ P EF + N + + G H+FSH++ V+ A
Sbjct: 340 FGQESWPKDMDAEFQKSIAQWISNDSRSLIKKYQSRGRYLHIFSHIRKTSHVFYAIASPD 399
Query: 324 TIPANKTYKLITETQMK 340
+ N+ + I+++ ++
Sbjct: 400 IV-TNEDFFWISQSDLE 415
Score = 60 (26.2 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 9 EILAFQESILTWYKQNARQLPWRE 32
E+ F+ES++ +Y + R LPWR+
Sbjct: 17 EVERFRESLIQFYDKTKRILPWRK 40
>GENEDB_PFALCIPARUM|PF11_0306 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine
glycosylase, putative" species:5833 "Plasmodium falciparum"
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR003265 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703
KO:K03575 RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 348 (127.6 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 71/191 (37%), Positives = 118/191 (61%)
Query: 33 SNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRV 92
S Y ++ISE+MLQQT+V TVL +Y K++ + I D A D+VL +W+GLGYY+R
Sbjct: 208 STKGYQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYNRA 267
Query: 93 RNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYG 152
+N C+ V++++ G P D K L ++ G+GDYT+ A+ YN +D N+ RI+
Sbjct: 268 KNLLECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIFS 327
Query: 153 RLFEIEDDISKGKTKVVYETLVSKTM--SQTNAREFNQALMDLGATVCLFKNPKCKECPL 210
R+ + + + G T + + VS+ + ++N + +QA MDLG++VC +P C +CP+
Sbjct: 328 RITDTINYYNSG-TLLKHCEKVSEILCSGESNYSDLSQAFMDLGSSVCN-NSPDCSQCPI 385
Query: 211 SRFCSAY-KNN 220
+++C Y K+N
Sbjct: 386 NKYCMIYLKSN 396
Score = 71 (30.1 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 41/157 (26%), Positives = 64/157 (40%)
Query: 218 KNNTIENFPVK-LGKTKVKDVFLLTVVVKTDTNKYLIQKRPTTGLLSNFYMFLSFESDTP 276
KNN +N K L K K + ++ DT Y++ K T L S Y+F DT
Sbjct: 452 KNNMNKNSCTKKLEKKKTASRQIKESYLE-DT--YMMIKNTDTNLFSMHYLFPFILLDT- 507
Query: 277 YTS----QVEFLSENLP-FKVNLNEK----CLGNVKHVFSHLKWNMDVYSGTAK--EKTI 325
Y +V+ ++ L V +EK + N KH FSHL ++ +Y T E
Sbjct: 508 YDKNDCVKVKHFNDLLKSLNVTNSEKDRYLYINNFKHKFSHLTYHTHIYLCTVSDWENIT 567
Query: 326 PANKTYKLITETQMKKYAFPVPYQKVWKLFTKSKGLK 362
N+ K + ++ + Q + + KS K
Sbjct: 568 KNNEERKWVILKDIRNFTHNTFCQNIIDSYKKSMNEK 604
Score = 61 (26.5 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 14 QESILTWYKQNARQLPWRESNNPY 37
++ +L WY + R+LPWR P+
Sbjct: 43 KKDLLNWYYKYRRKLPWRGDEPPF 66
>UNIPROTKB|Q8II68 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine glycosylase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR003265 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703 KO:K03575
RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 348 (127.6 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 71/191 (37%), Positives = 118/191 (61%)
Query: 33 SNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRV 92
S Y ++ISE+MLQQT+V TVL +Y K++ + I D A D+VL +W+GLGYY+R
Sbjct: 208 STKGYQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYNRA 267
Query: 93 RNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYG 152
+N C+ V++++ G P D K L ++ G+GDYT+ A+ YN +D N+ RI+
Sbjct: 268 KNLLECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIFS 327
Query: 153 RLFEIEDDISKGKTKVVYETLVSKTM--SQTNAREFNQALMDLGATVCLFKNPKCKECPL 210
R+ + + + G T + + VS+ + ++N + +QA MDLG++VC +P C +CP+
Sbjct: 328 RITDTINYYNSG-TLLKHCEKVSEILCSGESNYSDLSQAFMDLGSSVCN-NSPDCSQCPI 385
Query: 211 SRFCSAY-KNN 220
+++C Y K+N
Sbjct: 386 NKYCMIYLKSN 396
Score = 71 (30.1 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 41/157 (26%), Positives = 64/157 (40%)
Query: 218 KNNTIENFPVK-LGKTKVKDVFLLTVVVKTDTNKYLIQKRPTTGLLSNFYMFLSFESDTP 276
KNN +N K L K K + ++ DT Y++ K T L S Y+F DT
Sbjct: 452 KNNMNKNSCTKKLEKKKTASRQIKESYLE-DT--YMMIKNTDTNLFSMHYLFPFILLDT- 507
Query: 277 YTS----QVEFLSENLP-FKVNLNEK----CLGNVKHVFSHLKWNMDVYSGTAK--EKTI 325
Y +V+ ++ L V +EK + N KH FSHL ++ +Y T E
Sbjct: 508 YDKNDCVKVKHFNDLLKSLNVTNSEKDRYLYINNFKHKFSHLTYHTHIYLCTVSDWENIT 567
Query: 326 PANKTYKLITETQMKKYAFPVPYQKVWKLFTKSKGLK 362
N+ K + ++ + Q + + KS K
Sbjct: 568 KNNEERKWVILKDIRNFTHNTFCQNIIDSYKKSMNEK 604
Score = 61 (26.5 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 14 QESILTWYKQNARQLPWRESNNPY 37
++ +L WY + R+LPWR P+
Sbjct: 43 KKDLLNWYYKYRRKLPWRGDEPPF 66
>TIGR_CMR|SPO_3448 [details] [associations]
symbol:SPO_3448 "A/G-specific adenine glycosylase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004844 "uracil DNA
N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104 KO:K03575
HOGENOM:HOG000028743 TIGRFAMs:TIGR01084 RefSeq:YP_168644.1
ProteinModelPortal:Q5LMW4 GeneID:3195498 KEGG:sil:SPO3448
PATRIC:23380357 OMA:QAVKPYF ProtClustDB:CLSK934171 Uniprot:Q5LMW4
Length = 351
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 105/324 (32%), Positives = 167/324 (51%)
Query: 16 SILTWYKQNARQLPWRESN---------NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYP 66
++L WY ++AR++PWR +PY VW+SEVMLQQT V V Y+ +F +P
Sbjct: 12 ALLDWYDRHAREMPWRVGPTDRAAGVRPDPYRVWLSEVMLQQTTVAAVRDYFHRFTARWP 71
Query: 67 TIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDY 126
T+ A ++ V+ W GLGYY+R RN R V E+ GG+ P + L+++ G+G Y
Sbjct: 72 TVAALAAAPDEAVMGEWAGLGYYARARNLLKCARAVSEEHGGQFPDSYEGLIALPGIGPY 131
Query: 127 TAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREF 186
TA A+A+I ++ +DGNV R+ RL+++++ + G V+ E + T + +
Sbjct: 132 TAAAIAAIAFDRAETVLDGNVERVMARLYDVQEPLP-GVKPVLKEHAAALTPT-ARPGDH 189
Query: 187 NQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGK----TKVKDVFLLTV 242
QA+MDLGAT+C + P C CPL C A + T + P K K T+ V+L
Sbjct: 190 AQAVMDLGATICTPRAPACGICPLRAPCLARQRGTAPDLPRKSPKKPKPTRHGHVYLAQ- 248
Query: 243 VVKTDTNKYLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENLPFKVNLNEKCLGNV 302
+ D +L+++RP GLL L + P + E + + PF+ E V
Sbjct: 249 --RAD-GAWLLERRPDKGLLGGM---LGW----PGSDWSEAPAPSPPFEAQWRE-LPAEV 297
Query: 303 KHVFSHLKWNMDVYSGTAKEKTIP 326
+H F+H + +++ E P
Sbjct: 298 RHTFTHFHLILRIHTAQLPETMAP 321
>UNIPROTKB|E9PM53 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
InterPro:IPR003265 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS01155 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0004519 EMBL:AL359540 HGNC:HGNC:7527
IPI:IPI01012578 ProteinModelPortal:E9PM53 SMR:E9PM53
Ensembl:ENST00000528013 ArrayExpress:E9PM53 Bgee:E9PM53
Uniprot:E9PM53
Length = 248
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 76/163 (46%), Positives = 102/163 (62%)
Query: 9 EILAFQESILTWYKQNARQLPWRE--------SNNPYYVWISEVMLQQTQVKTVLPYYEK 60
E+ AF+ S+L+WY Q R LPWR Y VW+SEVMLQQTQV TV+ YY
Sbjct: 78 EVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTG 137
Query: 61 FIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI 120
+++ +PT++D A + + V ++W GLGYYSR R Q G R+V+E+ GG +PR + L +
Sbjct: 138 WMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQL 197
Query: 121 -KGVGDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDIS 162
GVG YTAGA+ASI + T VDGNV R+ R+ I D S
Sbjct: 198 LPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPS 240
>TIGR_CMR|GSU_1613 [details] [associations]
symbol:GSU_1613 "A/G-specific adenine glycosylase,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0004844
"uracil DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR003265
InterPro:IPR011257 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004519 KO:K03575
HSSP:P17802 HOGENOM:HOG000028742 RefSeq:NP_952664.1
ProteinModelPortal:Q74CQ9 GeneID:2687415 KEGG:gsu:GSU1613
PATRIC:22026073 OMA:WHNALMD ProtClustDB:CLSK873803
BioCyc:GSUL243231:GH27-1573-MONOMER Uniprot:Q74CQ9
Length = 285
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 68/192 (35%), Positives = 107/192 (55%)
Query: 13 FQESILTWYKQNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFA 72
F+ + WY R+LPWRE+ +PY + +SE+MLQQTQV+ V Y F+ +P ++ A
Sbjct: 24 FRRIVYDWYASQRRELPWRETFDPYAILVSEIMLQQTQVERVREKYPTFLAEFPNLRALA 83
Query: 73 FDTEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALA 132
+ VL W+GLGY R N + V+ GGE+P D +L+ + G+G YT+ A+A
Sbjct: 84 AAPLERVLAAWQGLGYNRRAVNLKRCAEAVVASLGGELPADPNELVRLPGIGTYTSRAVA 143
Query: 133 SICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMD 192
+ +N P P ++ N+ +Y F D S ++ L+ +T+ + N RE+ ALMD
Sbjct: 144 AFAFNTPLPFIETNIRSVYIHHF-FADQSSIHDRDLM--PLIEQTLDRDNPREWYYALMD 200
Query: 193 LGATVC-LFKNP 203
G+ + L NP
Sbjct: 201 YGSHLKRLHGNP 212
>UNIPROTKB|O53574 [details] [associations]
symbol:mutY "PROBABLE ADENINE GLYCOSYLASE MUTY"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
SMART:SM00478 SMART:SM00525 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:BX842583 GO:GO:0051539
GO:GO:0004519 GO:GO:0016798 KO:K03575 EMBL:AL123456 PIR:F70804
RefSeq:NP_218106.1 RefSeq:NP_338239.1 RefSeq:YP_006517079.1
HSSP:P17802 SMR:O53574 EnsemblBacteria:EBMYCT00000003804
EnsemblBacteria:EBMYCT00000070555 GeneID:13317198 GeneID:886639
GeneID:926528 KEGG:mtc:MT3695 KEGG:mtu:Rv3589 KEGG:mtv:RVBD_3589
PATRIC:18129879 TubercuList:Rv3589 HOGENOM:HOG000028742 OMA:IMLQQTP
ProtClustDB:CLSK792583 Uniprot:O53574
Length = 304
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 71/202 (35%), Positives = 108/202 (53%)
Query: 16 SILTWYKQNARQLPWRESN-NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFD 74
++L WY+++ R LPWRE +P+ + +SE MLQQT VL + +++ +PT A
Sbjct: 20 NLLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATA 79
Query: 75 TEDNVLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEV-PRDKKQLLSIKGVGDYTAGALAS 133
+ +VL+ W LGY R + C VI + +V P D + L+++ GVG YTA A+A
Sbjct: 80 STADVLRAWGKLGYPRRAKRLHE-CATVIARDHNDVVPDDIEILVTLPGVGSYTARAVAC 138
Query: 134 ICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDL 193
Y P VD NV R+ R D + +++ + A EF+ ALM+L
Sbjct: 139 FAYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMEL 198
Query: 194 GATVCLFKNPKCKECPLSRFCS 215
GATVC + P+C CPL +C+
Sbjct: 199 GATVCTARTPRCGLCPLD-WCA 219
>UNIPROTKB|Q5T418 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 UniGene:Hs.271353 HGNC:HGNC:7527 HOGENOM:HOG000028743
IPI:IPI00647822 SMR:Q5T418 MINT:MINT-1380954 STRING:Q5T418
Ensembl:ENST00000412971 Uniprot:Q5T418
Length = 215
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 60/139 (43%), Positives = 79/139 (56%)
Query: 79 VLKMWEGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSI-KGVGDYTAGALASICYN 137
V ++W GLGYYSR R Q G R+V+E+ GG +PR + L + GVG YTAGA+ASI +
Sbjct: 14 VNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFG 73
Query: 138 IPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATV 197
T VDGNV R+ R+ I D S L + + +FNQA M+LGATV
Sbjct: 74 QATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATV 133
Query: 198 CLFKNPKCKECPLSRFCSA 216
C + P C +CP+ C A
Sbjct: 134 CTPQRPLCSQCPVESLCRA 152
>TIGR_CMR|BA_1570 [details] [associations]
symbol:BA_1570 "endonuclease III" species:198094 "Bacillus
anthracis str. Ames" [GO:0000703 "oxidized pyrimidine nucleobase
lesion DNA N-glycosylase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
Pfam:PF10576 PIRSF:PIRSF001435 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0051539 GO:GO:0005622 GO:GO:0004519 GO:GO:0003906 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625
RefSeq:NP_844020.1 RefSeq:YP_018193.1 RefSeq:YP_027725.1
ProteinModelPortal:Q81SS5 SMR:Q81SS5 DNASU:1083694
EnsemblBacteria:EBBACT00000010838 EnsemblBacteria:EBBACT00000014468
EnsemblBacteria:EBBACT00000019730 GeneID:1083694 GeneID:2815568
GeneID:2851771 KEGG:ban:BA_1570 KEGG:bar:GBAA_1570 KEGG:bat:BAS1456
ProtClustDB:CLSK2521133 BioCyc:BANT260799:GJAJ-1530-MONOMER
BioCyc:BANT261594:GJ7F-1594-MONOMER Uniprot:Q81SS5
Length = 215
Score = 197 (74.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 52/185 (28%), Positives = 93/185 (50%)
Query: 34 NNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYY-SRV 92
+NP+ + I+ + Q V + + Y T +D+ + + + + +G Y ++
Sbjct: 28 DNPFELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKA 87
Query: 93 RNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYG 152
+N Q CR +++ + GEVP+D+ +L + GVG TA + S+ + IP AVD +V R+
Sbjct: 88 KNIQKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVAFGIPAIAVDTHVERVSK 147
Query: 153 RLFEIEDDISKGKTKV--VYETLVSKT-MSQTNAREFNQALMDLGATVCLFKNPKCKECP 209
RL I + K V V +TL+ K M + + + ++ G C + P+C+ECP
Sbjct: 148 RLA-----ICRWKDSVLEVEKTLMKKIPMDEWSVT--HHRMIFFGRYHCKAQRPQCEECP 200
Query: 210 LSRFC 214
L C
Sbjct: 201 LLEVC 205
>TIGR_CMR|CJE_0698 [details] [associations]
symbol:CJE_0698 "endonuclease III" species:195099
"Campylobacter jejuni RM1221" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS00764 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:B81407 RefSeq:YP_178710.1
ProteinModelPortal:Q5HVH5 STRING:Q5HVH5 GeneID:3231980
KEGG:cjr:CJE0698 PATRIC:20043124 ProtClustDB:CLSK872385
BioCyc:CJEJ195099:GJC0-715-MONOMER Uniprot:Q5HVH5
Length = 208
Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 60/211 (28%), Positives = 96/211 (45%)
Query: 8 KEILAFQESILTWYKQNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPT 67
K L +E L + + +L + +N Y + + ++ Q K V K YP
Sbjct: 2 KRNLEIKELFLKHFDKPVTELKF---SNLYELLVCVMLSAQCTDKRVNLITPDLFKAYPD 58
Query: 68 IKDFAFDTEDNVLKMW-EGLGYYS-RVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGD 125
IK A + + LK + + +++ + +N + V E F GE+P D++ L S+ GVG
Sbjct: 59 IKSLA-NANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLDEQNLKSLAGVGQ 117
Query: 126 YTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNARE 185
TA + AVD +VFR+ RL +SK KT E +++T N
Sbjct: 118 KTAHVVLIEWCGANFMAVDTHVFRVSHRL-----GLSKAKTPEATEEDLTRTFKD-NLNY 171
Query: 186 FNQALMDLGATVCLFKNPKCKECPLSRFCSA 216
+QA++ G C K P CKEC L+ C +
Sbjct: 172 LHQAMVLFGRYTCKAKKPLCKECFLNHLCKS 202
>UNIPROTKB|Q97QE0 [details] [associations]
symbol:nth "Endonuclease III" species:170187 "Streptococcus
pneumoniae TIGR4" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0005622 EMBL:AE005672 GenomeReviews:AE005672_GR
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625 PIR:D98016
PIR:F95148 RefSeq:NP_345743.1 ProteinModelPortal:Q97QE0
EnsemblBacteria:EBSTRT00000027009 GeneID:931793 KEGG:spn:SP_1279
PATRIC:19706957 ProtClustDB:CLSK884066 Uniprot:Q97QE0
Length = 209
Score = 179 (68.1 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 55/206 (26%), Positives = 93/206 (45%)
Query: 5 LSAKEILAFQESILTWYKQNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKT 64
LS K E I+ + +A+ P + N + + ++ ++ QT V
Sbjct: 3 LSKKRARKVLEEIIALFP-DAK--PSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVA 59
Query: 65 YPTIKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGC-RQVIEQFGGEVPRDKKQLLSIKGV 123
+PT + + TE + LG Y F C +Q+++ F G+VP+ +++L S+ GV
Sbjct: 60 FPTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGV 119
Query: 124 GDYTAGALASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNA 183
G TA + S+ + IP AVD +V RI D + K T + E V +
Sbjct: 120 GRKTANVVMSVGFGIPAFAVDTHVERICKH----HDIVKKSATPLEVEKRVMDILPPEQW 175
Query: 184 REFNQALMDLGATVCLFKNPKCKECP 209
+QA++ G +C KNP+C + P
Sbjct: 176 LAAHQAMIYFGRAICHPKNPECDQYP 201
>TIGR_CMR|DET_0935 [details] [associations]
symbol:DET_0935 "endonuclease III" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PIRSF:PIRSF001435 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 RefSeq:YP_181660.1
ProteinModelPortal:Q3Z7Y9 STRING:Q3Z7Y9 GeneID:3229754
KEGG:det:DET0935 PATRIC:21608917 ProtClustDB:CLSK837188
BioCyc:DETH243164:GJNF-936-MONOMER Uniprot:Q3Z7Y9
Length = 218
Score = 179 (68.1 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 50/185 (27%), Positives = 90/185 (48%)
Query: 36 PYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYY-SRVRN 94
P+ + ++ ++ Q+ K + K YP ++ FA + + + + G++ ++ N
Sbjct: 33 PFEMLVATILSAQSTDKMINKITPALFKKYPGVQAFADASLAELEQDIKSSGFFHNKALN 92
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTP-AVDGNVFRIYGR 153
R V+ +FGG+VPR+ +L++ GVG TA + + + AVD +V R+ GR
Sbjct: 93 IIGAARAVVSRFGGDVPRNMADMLTLPGVGRKTANVVLHNAFGLVEGIAVDTHVKRLAGR 152
Query: 154 LFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSRF 213
L +S V E + + ++ F+ L+D G VC K P+C EC L+
Sbjct: 153 L-----GLSTNTDPVKIEQDLMALIPRSEWGNFSYYLIDHGRAVCDAKKPRCPECVLNDI 207
Query: 214 C-SAY 217
C SA+
Sbjct: 208 CPSAF 212
>TIGR_CMR|GSU_1450 [details] [associations]
symbol:GSU_1450 "endonuclease III, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0004519 GO:GO:0016798 KO:K10773
HOGENOM:HOG000252209 RefSeq:NP_952501.2 GeneID:2687781
KEGG:gsu:GSU1450 PATRIC:22025743 ProtClustDB:CLSK2306769
BioCyc:GSUL243231:GH27-1429-MONOMER Uniprot:Q74D69
Length = 218
Score = 170 (64.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 15 ESILTWYKQNARQLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFD 74
E++ W + RE N P+ V +S ++ +TQ +T P E+ T
Sbjct: 15 EAVKQWPSPAVTIVSQREGN-PFKVLVSCILSLRTQDRTTGPASERLFALADTPAAMVRL 73
Query: 75 TEDNVLKMWEGLGYY-SRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALAS 133
++D++ K +G+Y ++ CR ++E++ G VP + +LL+ KGVG TA + +
Sbjct: 74 SKDDIEKAIYPVGFYHTKAEQILEICRVLLERYDGGVPDELDELLAFKGVGRKTANLVIT 133
Query: 134 ICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDL 193
+ + P VD +V RI R I + KT E + + + N L+
Sbjct: 134 LGFGKPGICVDTHVHRICNRWGYI-----RTKTPEQTEFSLRRILPHRYWLVINDYLVTF 188
Query: 194 GATVCLFKNPKCKECPLSRFC 214
G C +P+C C L+++C
Sbjct: 189 GQNHCTPVSPRCSTCVLAQWC 209
>TIGR_CMR|CBU_1697 [details] [associations]
symbol:CBU_1697 "endonuclease III" species:227377
"Coxiella burnetii RSA 493" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_820678.1
ProteinModelPortal:Q83B22 SMR:Q83B22 PRIDE:Q83B22 GeneID:1209608
KEGG:cbu:CBU_1697 PATRIC:17932131 ProtClustDB:CLSK914967
BioCyc:CBUR227377:GJ7S-1668-MONOMER Uniprot:Q83B22
Length = 218
Score = 166 (63.5 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 37/147 (25%), Positives = 76/147 (51%)
Query: 76 EDNVLKMWEGLGYYS-RVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASI 134
E + K + +G Y+ + +N C+ ++E + +VPR +++L ++ GVG TA + +
Sbjct: 69 ESGLKKYIKSIGLYNTKAKNIIKTCKILVENYHSKVPRTREELEALPGVGRKTANVILNT 128
Query: 135 CYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLG 194
+ AVD ++FR+ R +++GKT + E + + + + + + L+ G
Sbjct: 129 AFGEHAIAVDTHIFRVANRT-----GLARGKTPLAVEKKLMEVVPKKYLADAHHWLVLHG 183
Query: 195 ATVCLFKNPKCKECPLSRFCSAYKNNT 221
+C+ + PKC EC ++ C Y + T
Sbjct: 184 RYICIARRPKCSECLINDLCE-YPDKT 209
>TIGR_CMR|SO_2514 [details] [associations]
symbol:SO_2514 "endonuclease III" species:211586
"Shewanella oneidensis MR-1" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_718101.1
ProteinModelPortal:Q8EE75 SMR:Q8EE75 GeneID:1170225
KEGG:son:SO_2514 PATRIC:23524657 Uniprot:Q8EE75
Length = 231
Score = 168 (64.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 17 ILTWYKQNARQLPWRESN--NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKD-FAF 73
ILT ++N + P E N +P+ + ++ + Q +V +K T +A
Sbjct: 9 ILTRLRENNPK-PQTELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANTAHSIYAL 67
Query: 74 DTEDNVLKMW-EGLGYYS-RVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGAL 131
E LK + + +G Y+ + N C +IE++ GEVP D++ L S+ GVG TA +
Sbjct: 68 GVEG--LKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALESLPGVGRKTANVV 125
Query: 132 ASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALM 191
+ + PT AVD ++FR+ R + GK V E + K + + + +
Sbjct: 126 LNTAFGWPTIAVDTHIFRLANRT-----KFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI 180
Query: 192 DLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVK 228
G CL + P+C C + C YK+ F K
Sbjct: 181 LHGRYTCLARKPRCGSCIIEDLCE-YKSTLKRRFTPK 216
>UNIPROTKB|P0AB83 [details] [associations]
symbol:nth "endonuclease III; specific for apurinic and/or
apyrimidinic sites" species:83333 "Escherichia coli K-12"
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0016798 "hydrolase activity, acting on glycosyl bonds"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 GO:GO:0016798 eggNOG:COG0177
EMBL:J02857 PIR:A32412 RefSeq:NP_416150.1 RefSeq:YP_489897.1
PDB:2ABK PDBsum:2ABK ProteinModelPortal:P0AB83 SMR:P0AB83
DIP:DIP-48071N IntAct:P0AB83 MINT:MINT-1223379
EnsemblBacteria:EBESCT00000001176 EnsemblBacteria:EBESCT00000001177
EnsemblBacteria:EBESCT00000015357 GeneID:12933192 GeneID:947122
KEGG:ecj:Y75_p1610 KEGG:eco:b1633 PATRIC:32118568 EchoBASE:EB0656
EcoGene:EG10662 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
ProtClustDB:PRK10702 BioCyc:EcoCyc:EG10662-MONOMER
BioCyc:ECOL316407:JW1625-MONOMER EvolutionaryTrace:P0AB83
Genevestigator:P0AB83 TIGRFAMs:TIGR01083 Uniprot:P0AB83
Length = 211
Score = 163 (62.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 58/208 (27%), Positives = 94/208 (45%)
Query: 17 ILTWYKQNARQLPWRESN--NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFD 74
ILT ++N P E N +P+ + I+ ++ Q T + + K YP A
Sbjct: 9 ILTRLRENNPH-PTTELNFSSPFELLIAVLLSAQA---TDVSVNKATAKLYPVANTPAAM 64
Query: 75 TEDNV--LKMW-EGLGYY-SRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGA 130
E V +K + + +G Y S+ N CR ++EQ GEVP D+ L ++ GVG TA
Sbjct: 65 LELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANV 124
Query: 131 LASICYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQAL 190
+ + + PT AVD ++FR+ R + GK E + K + + + L
Sbjct: 125 VLNTAFGWPTIAVDTHIFRVCNRT-----QFAPGKNVEQVEEKLLKVVPAEFKVDCHHWL 179
Query: 191 MDLGATVCLFKNPKCKECPLSRFCSAYK 218
+ G C+ + P+C C + C YK
Sbjct: 180 ILHGRYTCIARKPRCGSCIIEDLCE-YK 206
>UNIPROTKB|Q9KT92 [details] [associations]
symbol:VC_1011 "Endonuclease III" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 PIR:A82252 RefSeq:NP_230657.1
ProteinModelPortal:Q9KT92 SMR:Q9KT92 DNASU:2614264 GeneID:2614264
KEGG:vch:VC1011 PATRIC:20081122 ProtClustDB:CLSK874181
Uniprot:Q9KT92
Length = 213
Score = 156 (60.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 50/191 (26%), Positives = 89/191 (46%)
Query: 27 QLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFI---KTYPTIKDFAFDTEDNVLKMW 83
+L W N+P+ + I+ ++ Q +V +K T T+ D D +K
Sbjct: 23 ELNW---NSPFELLIAVLLSAQATDVSVNKATDKLYAVANTPQTMLDLGVDGVKEYIKTI 79
Query: 84 EGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAV 143
GL + S+ N CR ++E+ GEVP D++ L ++ GVG TA + + + PT AV
Sbjct: 80 -GL-FNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPTIAV 137
Query: 144 DGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNP 203
D ++FR+ R + + K +V ++ L K + + + L+ G C+ + P
Sbjct: 138 DTHIFRVSNRT---KFAVGKNVDEVEHKLL--KVVPNEFKLDVHHWLILHGRYTCVARKP 192
Query: 204 KCKECPLSRFC 214
+C C + C
Sbjct: 193 RCGSCIIEDLC 203
>TIGR_CMR|CHY_1121 [details] [associations]
symbol:CHY_1121 "endonuclease III" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_359967.1
ProteinModelPortal:Q3AD17 STRING:Q3AD17 GeneID:3726382
KEGG:chy:CHY_1121 PATRIC:21275382
BioCyc:CHYD246194:GJCN-1120-MONOMER Uniprot:Q3AD17
Length = 210
Score = 156 (60.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 35 NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYY-SRVR 93
N + + ++ V+ Q+ + V EK +D E+ + + LG Y ++ R
Sbjct: 28 NIFQLLVAVVLSAQSTDRQVNKVTEKLFLFVKEPRDLLDMGEEELSRQIRSLGLYRNKAR 87
Query: 94 NFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYGR 153
N + ++ G+VP +LL + GVG TA + + +N P+ VD +VFR+ R
Sbjct: 88 NLIKIAEILDREYHGQVPDSFAELLKLPGVGPKTAEVIVGVGFNKPSFPVDTHVFRVARR 147
Query: 154 LFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSRF 213
L +SK +T + K + + + L+ G +C + P C CP F
Sbjct: 148 L-----GLSKARTPEGVSFDLKKIFPPNSWIDLHHRLIFFGRRICKAQKPSCNICPFPEF 202
Query: 214 C 214
C
Sbjct: 203 C 203
>TIGR_CMR|VC_1011 [details] [associations]
symbol:VC_1011 "endonuclease III" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 PIR:A82252 RefSeq:NP_230657.1
ProteinModelPortal:Q9KT92 SMR:Q9KT92 DNASU:2614264 GeneID:2614264
KEGG:vch:VC1011 PATRIC:20081122 ProtClustDB:CLSK874181
Uniprot:Q9KT92
Length = 213
Score = 156 (60.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 50/191 (26%), Positives = 89/191 (46%)
Query: 27 QLPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFI---KTYPTIKDFAFDTEDNVLKMW 83
+L W N+P+ + I+ ++ Q +V +K T T+ D D +K
Sbjct: 23 ELNW---NSPFELLIAVLLSAQATDVSVNKATDKLYAVANTPQTMLDLGVDGVKEYIKTI 79
Query: 84 EGLGYYSRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAV 143
GL + S+ N CR ++E+ GEVP D++ L ++ GVG TA + + + PT AV
Sbjct: 80 -GL-FNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPTIAV 137
Query: 144 DGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNP 203
D ++FR+ R + + K +V ++ L K + + + L+ G C+ + P
Sbjct: 138 DTHIFRVSNRT---KFAVGKNVDEVEHKLL--KVVPNEFKLDVHHWLILHGRYTCVARKP 192
Query: 204 KCKECPLSRFC 214
+C C + C
Sbjct: 193 RCGSCIIEDLC 203
>TIGR_CMR|APH_0897 [details] [associations]
symbol:APH_0897 "endonuclease III" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 ProtClustDB:CLSK749547 RefSeq:YP_505472.1
ProteinModelPortal:Q2GJH9 SMR:Q2GJH9 STRING:Q2GJH9 GeneID:3930592
KEGG:aph:APH_0897 PATRIC:20950500
BioCyc:APHA212042:GHPM-910-MONOMER Uniprot:Q2GJH9
Length = 209
Score = 146 (56.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 35 NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYY-SRVR 93
N + + ++ V+ +T +V K + K E + + +G Y S+ +
Sbjct: 26 NEFTLLVAIVLSARTTDVSVNKITAKLFDVANSAKKMLALGESGLKRYINSIGLYNSKAK 85
Query: 94 NFQAGCRQVIEQ-FGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYG 152
N ++IE +GG +PRD L ++ GVG +A + C +PT AVD +VFR+
Sbjct: 86 NI-IQLSEIIENTYGGTIPRDFDALTALPGVGRKSANVFLNSCLGVPTIAVDTHVFRVSN 144
Query: 153 RLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSR 212
R+ +++ G K + + + K + A + L+ G VC + P C +C +S
Sbjct: 145 RIGLVQESSVLGVEKSLEKVVPEKW--KLYAHHW---LVLHGRYVCKARTPLCGKCIVSD 199
Query: 213 FCSA 216
C++
Sbjct: 200 LCAS 203
>TAIR|locus:2198738 [details] [associations]
symbol:NTH2 "endonuclease III 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 EMBL:CP002684 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0004519
GO:GO:0042644 GO:GO:0019104 KO:K10773 EMBL:AK316958 IPI:IPI00534650
RefSeq:NP_973767.1 UniGene:At.26529 ProteinModelPortal:B9DFZ0
PRIDE:B9DFZ0 EnsemblPlants:AT1G05900.2 GeneID:837100
KEGG:ath:AT1G05900 TAIR:At1g05900 OMA:CGINNIC PhylomeDB:B9DFZ0
Genevestigator:Q3EDI2 Uniprot:B9DFZ0
Length = 386
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 52/198 (26%), Positives = 92/198 (46%)
Query: 28 LPWRESNNPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDN--VLKMWEG 85
LP +E +YV I ++ QT+ E+ + + A D D + ++
Sbjct: 174 LPPKERR--FYVLIGTLLSSQTKEHITGAAVERLHQN-GLLTPEAIDKADESTIKELIYP 230
Query: 86 LGYYSR-VRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAV 143
+G+Y+R N + + + ++ G++PR ++LLS+ GVG A + + +N + V
Sbjct: 231 VGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICV 290
Query: 144 DGNVFRIYGRLFEIEDDISKGKTKVVYETLVS--KTMSQTNAREFNQALMDLGATVCLFK 201
D +V RI RL + +K KT ET V+ + + + N L+ G T+C
Sbjct: 291 DTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQTICTPL 350
Query: 202 NPKCKECPLSRFC-SAYK 218
P C C ++ C SA+K
Sbjct: 351 RPHCGTCSITEICPSAFK 368
>TIGR_CMR|SPO_3581 [details] [associations]
symbol:SPO_3581 "endonuclease III" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_168776.1
ProteinModelPortal:Q5LMI2 SMR:Q5LMI2 GeneID:3196325
KEGG:sil:SPO3581 PATRIC:23380639 ProtClustDB:CLSK934216
Uniprot:Q5LMI2
Length = 214
Score = 142 (55.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 76 EDNVLKMWEGLGYY-SRVRNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASI 134
E+ V + + +G + + +N R ++EQ+GGEVP + L S+ GVG TA + ++
Sbjct: 73 EEGVTEHIKTIGLFRQKAKNVIKLSRILVEQYGGEVPNSRAALQSLPGVGRKTANVVLNM 132
Query: 135 CYNIPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLG 194
+ IP AVD ++FR+ R I GK E + + + + L+ G
Sbjct: 133 WWRIPAQAVDTHIFRVGNRT-----GICPGKDVDTVERAIEDNIPADFQQHAHHWLILHG 187
Query: 195 ATVCLFKNPKCKECPLSRFCSAYKNNTI 222
C + P C C + C +++ T+
Sbjct: 188 RYHCKARKPMCGTCLIRDLCQ-FEDKTL 214
>UNIPROTKB|F1NQP6 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
GO:GO:0019104 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC EMBL:AADN02023662
IPI:IPI00602448 Ensembl:ENSGALT00000009013 ArrayExpress:F1NQP6
Uniprot:F1NQP6
Length = 251
Score = 138 (53.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 47/186 (25%), Positives = 89/186 (47%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + + + T+ D +D L ++ +G++ ++V+
Sbjct: 69 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTV-DSILQMDDATLGQIIYPVGFWRNKVKY 127
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + +++GG++P ++L+ + GVG A +I +N + AVD +V RI R
Sbjct: 128 IKQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNR 187
Query: 154 LFEIEDDIS-KGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSR 212
L ++ + +T+V E + + + RE N L+ G CL NP+CKEC
Sbjct: 188 LKWVKKETRYPEETRVALEDWLPRDLW----REINWLLVGFGQQTCLPVNPRCKECLNQD 243
Query: 213 FCSAYK 218
C K
Sbjct: 244 ICPTAK 249
>ZFIN|ZDB-GENE-120511-4 [details] [associations]
symbol:nthl1 "nth endonuclease III-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-120511-4
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 GeneTree:ENSGT00510000047513 EMBL:CABZ01067150
EMBL:CABZ01067151 IPI:IPI00628612 Ensembl:ENSDART00000062941
Bgee:F1QBP9 Uniprot:F1QBP9
Length = 402
Score = 142 (55.0 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 62/251 (24%), Positives = 110/251 (43%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V IS ++ QT+ + ++ ++ + D +D L K+ +G++ ++V+
Sbjct: 140 YQVLISLMLSSQTKDQVTAGAMQR-LREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKY 198
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + ++FGG++P + L+ + GVG A I +N + VD +V RI R
Sbjct: 199 IKQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNR 258
Query: 154 LFEIEDDISKGKTKVVYET--LVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLS 211
L +K +TK ET + + + + E N L+ G VCL P C C
Sbjct: 259 L-----GWTKKETKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSVCLNQ 313
Query: 212 RFC-SAYKNNT---IENFPVKLGKTKVKDVFLLTVVVKTDTNKYLI--QKRPTTGLLSNF 265
C SA++++ I++ P K K+ L DT+ + Q+R TG N
Sbjct: 314 HTCPSAHRSSPSKKIKSSPAK-PNNKLASPTALVKEEPEDTSAQRVSHQRRKNTGPQLNQ 372
Query: 266 YMFLSFESDTP 276
+ +TP
Sbjct: 373 QDLSASRQETP 383
>TAIR|locus:2061345 [details] [associations]
symbol:ATNTH1 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP002685 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
EMBL:AC007169 GO:GO:0004519 GO:GO:0042644 GO:GO:0019104 KO:K10773
IPI:IPI00540590 PIR:H84720 RefSeq:NP_565725.1 UniGene:At.10180
HSSP:P20625 ProteinModelPortal:Q9SIC4 SMR:Q9SIC4 STRING:Q9SIC4
PRIDE:Q9SIC4 EnsemblPlants:AT2G31450.1 GeneID:817703
KEGG:ath:AT2G31450 TAIR:At2g31450 InParanoid:Q9SIC4 OMA:DIEDFAY
PhylomeDB:Q9SIC4 ProtClustDB:CLSN2688602 Genevestigator:Q9SIC4
Uniprot:Q9SIC4
Length = 379
Score = 141 (54.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 41/160 (25%), Positives = 77/160 (48%)
Query: 76 EDNVLKMWEGLGYYSRVRNFQAGCRQV-IEQFGGEVPRDKKQLLSIKGVGDYTAGALASI 134
E + ++ +G+Y+R + ++ + ++ G++P LLS+ G+G A + I
Sbjct: 214 ESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHI 273
Query: 135 CYN-IPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNARE----FNQA 189
+N + VD +V RI RL + +K KT ET V+ + Q +E N
Sbjct: 274 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVA--LQQWLPKEEWVAINPL 331
Query: 190 LMDLGATVCLFKNPKCKECPLSRFC-SAYKNNTIENFPVK 228
L+ G +C P+C+ C +S+ C +A+K + + +K
Sbjct: 332 LVGFGQMICTPIRPRCEACSVSKLCPAAFKETSSPSSKLK 371
>UNIPROTKB|H0YEI2 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR011257 Pfam:PF10576 PROSITE:PS00764
SMART:SM00525 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0006281 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 HGNC:HGNC:7527 Ensembl:ENST00000467459 Bgee:H0YEI2
Uniprot:H0YEI2
Length = 184
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 140 TPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCL 199
T VDGNV R+ R+ I D S L + + +FNQA M+LGATVC
Sbjct: 2 TGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCT 61
Query: 200 FKNPKCKECPLSRFCSA 216
+ P C +CP+ C A
Sbjct: 62 PQRPLCSQCPVESLCRA 78
>TIGR_CMR|ECH_0857 [details] [associations]
symbol:ECH_0857 "endonuclease III" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_507652.1
ProteinModelPortal:Q2GFY1 SMR:Q2GFY1 STRING:Q2GFY1 GeneID:3928070
KEGG:ech:ECH_0857 PATRIC:20577124 ProtClustDB:CLSK749547
BioCyc:ECHA205920:GJNR-860-MONOMER Uniprot:Q2GFY1
Length = 210
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/190 (25%), Positives = 88/190 (46%)
Query: 35 NPYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMW-EGLGYY-SRV 92
N + + I+ V+ +T +V +K + T + D + LK + +G Y S+
Sbjct: 28 NSFTLLIAIVLSARTTDVSVNKITDKLFEVADTPRKM-LDLGEKGLKNYINTIGLYNSKS 86
Query: 93 RNFQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYG 152
+N A +I Q VP D L+++ GVG +A + N+PT AVD +VFR+
Sbjct: 87 KNIIALSGIIINQHNSNVPLDFNTLVALPGVGRKSANVFLNTWLNLPTVAVDTHVFRVSN 146
Query: 153 RLFEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSR 212
R+ +++ + KT+ ++ K A + L+ G VC + P C +C +
Sbjct: 147 RIGLVKES-NVLKTEDALLNVIPKKWL-LYAHHW---LVLHGRYVCKSRKPLCSQCVVQD 201
Query: 213 FCSAYKNNTI 222
C Y++ ++
Sbjct: 202 LCE-YESKSL 210
>UNIPROTKB|P63540 [details] [associations]
symbol:nth "Endonuclease III" species:1773 "Mycobacterium
tuberculosis" [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005886 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 EMBL:BX842583 GO:GO:0006281
GO:GO:0051539 GO:GO:0005622 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 GO:GO:0019104 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:C70790 RefSeq:NP_218191.2 RefSeq:NP_338328.1
RefSeq:YP_006517162.1 ProteinModelPortal:P63540 SMR:P63540
PRIDE:P63540 EnsemblBacteria:EBMYCT00000000148
EnsemblBacteria:EBMYCT00000071122 GeneID:13317283 GeneID:885058
GeneID:926474 KEGG:mtc:MT3775 KEGG:mtu:Rv3674c KEGG:mtv:RVBD_3674c
PATRIC:18130064 TubercuList:Rv3674c HOGENOM:HOG000252208
ProtClustDB:CLSK799395 Uniprot:P63540
Length = 245
Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 36 PYYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVLKMWEGLGYYSRVRNF 95
P + ++ ++ Q+ K V Y T +D+A + + G+Y
Sbjct: 40 PLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAAS 99
Query: 96 QAGCRQ-VIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYNIPTPAVDGNVFRIYGRL 154
G Q ++E+FGGEVP +L+++ GVG TA + + IP VD + +GRL
Sbjct: 100 LIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTH----FGRL 155
Query: 155 FEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSRFC 214
+ + V E V + + + + ++ G VC + P C C L++ C
Sbjct: 156 VR-RWRWTTAEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDC 214
Query: 215 SAY 217
++
Sbjct: 215 PSF 217
>DICTYBASE|DDB_G0277247 [details] [associations]
symbol:apnB "putative endonuclease III" species:44689
"Dictyostelium discoideum" [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 dictyBase:DDB_G0277247
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0051539 GO:GO:0004519
EMBL:AAFI02000019 eggNOG:COG0177 KO:K10773 OMA:CSECLNK
RefSeq:XP_642760.1 ProteinModelPortal:Q86K43 STRING:Q86K43
EnsemblProtists:DDB0232975 GeneID:8620949 KEGG:ddi:DDB_G0277247
InParanoid:Q86K43 ProtClustDB:CLSZ2846854 Uniprot:Q86K43
Length = 349
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 62 IKTYPTIKDFAFDTEDNVLK-MWEGLGYYSRVRNFQAGCRQVIE-QFGGEVPRDKKQLLS 119
+K Y D + N L+ + +G+Y R + ++++ ++ G++P K++
Sbjct: 179 LKEYGLTVDKMLTIDTNELETLLYPVGFYKRKAIYLKKIAEILKNKYNGDIPPTFKEIEQ 238
Query: 120 IKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGRLFEIEDDISKGKTKVVYETL--VSK 176
+ G+G + I + + AVD ++ RI RL + KTK ET+ +
Sbjct: 239 LPGIGPKMTNLIVQIAWGRVEGIAVDVHMHRISNRLGWV-------KTKTPEETMKDLES 291
Query: 177 TMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIE-NFPVKLGKTKVK 235
+ + N N L+ G T+C NPKC C ++ C IE N K K K+K
Sbjct: 292 WLPKENWATVNHLLVGFGQTICSPVNPKCSNCLVNNLCPV---GIIEMNSSKKKIKKKIK 348
>UNIPROTKB|F1RFB3 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019104 "DNA N-glycosylase activity" evidence=IEA]
[GO:0006296 "nucleotide-excision repair, DNA incision, 5'-to
lesion" evidence=IEA] [GO:0006285 "base-excision repair, AP site
formation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690
GO:GO:0004519 GO:GO:0003906 GO:GO:0019104 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC
EMBL:FP102350 Ensembl:ENSSSCT00000008810 Uniprot:F1RFB3
Length = 313
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 43/184 (23%), Positives = 86/184 (46%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + ++ ++ + D +D+ L + +G++ S+V+
Sbjct: 131 YQVLLSLMLSSQTKDQVTAGAMQR-LRAHGLTVDSILQMDDSTLGTLIYPVGFWRSKVKY 189
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + +++GG++P +L+++ GVG A ++ + + AVD +V RI GR
Sbjct: 190 IKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIAGR 249
Query: 154 L-FEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSR 212
L + + S KT+ E + + + E N L+ G CL P+C+ C
Sbjct: 250 LKWTKKATKSPEKTRTALEEWLPRELWS----EINGLLVGFGQQTCLPVRPRCQACLNRA 305
Query: 213 FCSA 216
C A
Sbjct: 306 LCPA 309
>UNIPROTKB|P78549 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IDA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0045008 "depyrimidination" evidence=TAS] Reactome:REACT_216
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 GO:GO:0045008 eggNOG:COG0177 GO:GO:0019104
KO:K10773 GO:GO:0006296 EMBL:AB014460 EMBL:AC005600
HOGENOM:HOG000252209 OMA:CLNQALC CTD:4913 HOVERGEN:HBG052675
OrthoDB:EOG4933JH EMBL:U79718 EMBL:AF498098 EMBL:AB001575
EMBL:U81285 EMBL:BC003014 EMBL:BC000391 EMBL:Y09687 IPI:IPI00001722
RefSeq:NP_002519.1 UniGene:Hs.66196 ProteinModelPortal:P78549
SMR:P78549 STRING:P78549 PhosphoSite:P78549 DMDM:29840795
PaxDb:P78549 PRIDE:P78549 Ensembl:ENST00000219066 GeneID:4913
KEGG:hsa:4913 UCSC:uc002col.1 GeneCards:GC16M002089 HGNC:HGNC:8028
HPA:CAB025152 MIM:602656 neXtProt:NX_P78549 PharmGKB:PA31811
InParanoid:P78549 PhylomeDB:P78549 GenomeRNAi:4913 NextBio:18903
ArrayExpress:P78549 Bgee:P78549 CleanEx:HS_NTHL1
Genevestigator:P78549 GermOnline:ENSG00000065057 Uniprot:P78549
Length = 312
Score = 123 (48.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + ++ T+ D T+D L K+ +G++ S+V+
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTV-DSILQTDDATLGKLIYPVGFWRSKVKY 188
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + + +GG++P +L+++ GVG A ++ + + AVD +V RI R
Sbjct: 189 IKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 248
Query: 154 LFEIEDDISKGKTKVVYET--LVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLS 211
L +K TK ET + + + + E N L+ G CL +P+C C
Sbjct: 249 L-----RWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQ 303
Query: 212 RFCSA 216
C A
Sbjct: 304 ALCPA 308
>UNIPROTKB|E2QX23 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913 EMBL:AAEX03004629
RefSeq:XP_853674.1 Ensembl:ENSCAFT00000030911 GeneID:610981
KEGG:cfa:610981 Uniprot:E2QX23
Length = 312
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 43/184 (23%), Positives = 83/184 (45%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + ++ ++ + D T+D L + +G++ S+V+
Sbjct: 130 YQVLLSLMLSSQTKDQVTAGAMQR-LRAHGLTVDSILQTDDATLGSLIYPVGFWRSKVKY 188
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + +++GG++P +L+++ GVG A ++ + + AVD +V RI R
Sbjct: 189 IKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 248
Query: 154 L-FEIEDDISKGKTKVVYETLVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLSR 212
L + S KT+ E + + + E N L+ G CL P+C C
Sbjct: 249 LRWTRTTTTSPEKTRAALEEWLPRELWG----EINGLLVGFGQQTCLPVRPRCGACLNRS 304
Query: 213 FCSA 216
C A
Sbjct: 305 LCPA 308
>POMBASE|SPAC30D11.07 [details] [associations]
symbol:nth1 "DNA endonuclease III" species:4896
"Schizosaccharomyces pombe" [GO:0000703 "oxidized pyrimidine
nucleobase lesion DNA N-glycosylase activity" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=ISS] [GO:0006285
"base-excision repair, AP site formation" evidence=IMP;IDA]
[GO:0008534 "oxidized purine nucleobase lesion DNA N-glycosylase
activity" evidence=IMP] [GO:0034039 "8-oxo-7,8-dihydroguanine DNA
N-glycosylase activity" evidence=IDA] [GO:0034042 "5-formyluracil
DNA N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 PomBase:SPAC30D11.07
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005759
GO:GO:0046872 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 eggNOG:COG0177 KO:K10773 GO:GO:0034039 GO:GO:0006285
HOGENOM:HOG000252209 OrthoDB:EOG4T1MWS GO:GO:0034042 GO:GO:0034043
EMBL:AB191154 PIR:JC6066 RefSeq:NP_593210.1
ProteinModelPortal:Q09907 STRING:Q09907 EnsemblFungi:SPAC30D11.07.1
GeneID:2543510 KEGG:spo:SPAC30D11.07 OMA:CSECLNK NextBio:20804520
Uniprot:Q09907
Length = 355
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 45/175 (25%), Positives = 82/175 (46%)
Query: 68 IKDFAFDTEDNVLKMWEGLGYYSRVRNFQAGCRQVI-EQFGGEVPRDKKQLLSIKGVGDY 126
++D E ++ K+ E +G+++R + +++ E+F G++P + L+++ GVG
Sbjct: 83 LEDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGDIPDTVEDLMTLPGVGPK 142
Query: 127 TAGALASICYNIPTP-AVDGNVFRIYGRLFEIEDDISKGKTKVVYETLVSKTMSQTNARE 185
SI +N VD +V RI L + +T+ ++ + K + E
Sbjct: 143 MGYLCMSIAWNKTVGIGVDVHVHRICNLLHWCNTKTEE-QTRAALQSWLPKELWF----E 197
Query: 186 FNQALMDLGATVCLFKNPKCKECPLSR--FC-SAYKNNTIENFPVKLGKTKVKDV 237
N L+ G T+CL + +C C LS C SA+K E + + K KVK +
Sbjct: 198 LNHTLVGFGQTICLPRGRRCDMCTLSSKGLCPSAFK----EKSGITITKRKVKTI 248
>RGD|1309289 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
binding" evidence=IEA;ISO] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA;ISO] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006285 "base-excision repair, AP site formation"
evidence=IEA;ISO] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA;ISO] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA;ISO] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 RGD:1309289 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 EMBL:CH473948 GO:GO:0019104 KO:K10773 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913
OrthoDB:EOG4933JH IPI:IPI00189546 RefSeq:NP_001099198.1
UniGene:Rn.14632 Ensembl:ENSRNOT00000016490 GeneID:29541
KEGG:rno:29541 UCSC:RGD:1309289 NextBio:609539 Uniprot:D4A4E8
Length = 300
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 43/185 (23%), Positives = 88/185 (47%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + ++ T++ T+D++L ++ +G++ S+V+
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESI-LQTDDDLLGRLIYPVGFWRSKVKF 176
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + +++ G++P +L+++ GVG A ++ + + AVD +V RI R
Sbjct: 177 IKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 236
Query: 154 LFEIEDDISKGKTKVVYETL--VSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLS 211
L +K TK ET + + + + E N L+ G +CL +P+C+ C
Sbjct: 237 L-----KWTKKMTKSPEETRRNLEEWLPRVLWSEINGLLVGFGQQICLPVHPRCQACLNK 291
Query: 212 RFCSA 216
C A
Sbjct: 292 ALCPA 296
>MGI|MGI:1313275 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISO;IDA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=ISO] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=ISO;IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016798
"hydrolase activity, acting on glycosyl bonds" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 MGI:MGI:1313275 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 eggNOG:COG0177 GO:GO:0019104 GO:GO:0006296
HOGENOM:HOG000252209 HOVERGEN:HBG052675 OrthoDB:EOG4933JH
EMBL:AB006812 EMBL:AB009371 EMBL:AJ001617 EMBL:Y09688 EMBL:AK033701
IPI:IPI00136370 UniGene:Mm.148315 ProteinModelPortal:O35980
SMR:O35980 STRING:O35980 PhosphoSite:O35980 PRIDE:O35980
InParanoid:O35980 ChiTaRS:NTHL1 CleanEx:MM_NTHL1
Genevestigator:O35980 GermOnline:ENSMUSG00000041429 Uniprot:O35980
Length = 300
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 43/185 (23%), Positives = 87/185 (47%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + ++ T++ T+D+ L ++ +G++ ++V+
Sbjct: 118 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESI-LQTDDDTLGRLIYPVGFWRNKVKY 176
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + +++ G++P +L+++ GVG A ++ + I AVD +V RI R
Sbjct: 177 IKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANR 236
Query: 154 LFEIEDDISKGKTKVVYETL--VSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLS 211
L +K TK ET + + + + E N L+ G +CL +P+C+ C
Sbjct: 237 L-----RWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNK 291
Query: 212 RFCSA 216
C A
Sbjct: 292 ALCPA 296
>UNIPROTKB|H0YCY5 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF10576 PROSITE:PS00764 PROSITE:PS51462
SMART:SM00525 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0006281 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0004519 EMBL:AL359540 HGNC:HGNC:7527
Ensembl:ENST00000529892 Uniprot:H0YCY5
Length = 213
Score = 111 (44.1 bits), Expect = 0.00050, P = 0.00050
Identities = 47/179 (26%), Positives = 71/179 (39%)
Query: 185 EFNQALMDLGATVCLFKNPKCKECPLSRFCSAYKNNTIENFPVKLGKTKVKDVFLLTVVV 244
+FNQA M+LGATVC + P C +CP+ C A + E + DV
Sbjct: 4 DFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDV------- 56
Query: 245 KTDTNKYLIQKRPTTGLLSNFYMFLSFESDTPYTSQVEFLSENL-----PFKVNLNEKCL 299
GLL+ + F S + Q + L + L P + + L
Sbjct: 57 ------------EECGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPAT-HLRHL 103
Query: 300 GNVKHVFSHLKWNMDVYSGTAKEKTIPANKT---YKLITETQMKKYAFPVPYQKVWKLF 355
G V H FSH+K VY G A E P + +T+ + A +KV++++
Sbjct: 104 GEVVHTFSHIKLTYQVY-GLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 161
>UNIPROTKB|Q2KID2 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209 OMA:CLNQALC
EMBL:BC112681 IPI:IPI00689580 RefSeq:NP_001039862.1 UniGene:Bt.6550
ProteinModelPortal:Q2KID2 STRING:Q2KID2 PRIDE:Q2KID2
Ensembl:ENSBTAT00000049780 GeneID:535203 KEGG:bta:535203 CTD:4913
HOVERGEN:HBG052675 InParanoid:Q2KID2 OrthoDB:EOG4933JH
NextBio:20876660 Uniprot:Q2KID2
Length = 305
Score = 112 (44.5 bits), Expect = 0.00097, P = 0.00097
Identities = 44/185 (23%), Positives = 84/185 (45%)
Query: 37 YYVWISEVMLQQTQVKTVLPYYEKFIKTYPTIKDFAFDTEDNVL-KMWEGLGYY-SRVRN 94
Y V +S ++ QT+ + ++ T+ D T+D+ L + +G++ S+V+
Sbjct: 123 YQVLLSLMLSSQTKDQVTAGAMQRLRARGLTV-DSILQTDDSTLGALIYPVGFWRSKVKY 181
Query: 95 FQAGCRQVIEQFGGEVPRDKKQLLSIKGVGDYTAGALASICYN-IPTPAVDGNVFRIYGR 153
+ + +++ G++P +L+++ GVG A ++ + + AVD +V RI R
Sbjct: 182 IKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 241
Query: 154 LFEIEDDISKGKTKVVYET--LVSKTMSQTNAREFNQALMDLGATVCLFKNPKCKECPLS 211
L +K TK ET + + + + E N L+ G CL P+C+ C
Sbjct: 242 L-----RWTKKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCLPIRPRCQACLNR 296
Query: 212 RFCSA 216
C A
Sbjct: 297 ALCPA 301
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 363 363 0.00083 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 611 (65 KB)
Total size of DFA: 253 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.95u 0.15s 30.10t Elapsed: 00:00:02
Total cpu time: 29.96u 0.15s 30.11t Elapsed: 00:00:02
Start: Thu Aug 15 12:23:34 2013 End: Thu Aug 15 12:23:36 2013