BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9550
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DRG7|MYPT1_DANRE Protein phosphatase 1 regulatory subunit 12A OS=Danio rerio
GN=ppp1r12a PE=2 SV=2
Length = 1049
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 182 DYKKLYEESQAELSRLRETLSKTEEELNQVK-----AT-----YSKNSLSEQEKRERRTM 231
DYKKLYE+ AE +L+ L TE EL+ +K AT ++ S E EKRERR +
Sbjct: 950 DYKKLYEQILAENEKLKAQLRDTELELSDLKLQLEKATQRQERFADRSQLEMEKRERRAL 1009
Query: 232 ERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
ERK+SEME ELK L K +NQRLKDENGALIRVISKLSK
Sbjct: 1010 ERKISEMEEELKMLPDLKADNQRLKDENGALIRVISKLSK 1049
>sp|Q10728|MYPT1_RAT Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus
GN=Ppp1r12a PE=1 SV=2
Length = 1032
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 67/100 (67%), Gaps = 10/100 (10%)
Query: 182 DYKKLYEESQAELSRLRETLSKTEEELNQVK-----AT-----YSKNSLSEQEKRERRTM 231
D+KKLYE+ AE +L+ L T EL +K AT ++ SL E EKRERR +
Sbjct: 933 DFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERFADRSLLEMEKRERRAL 992
Query: 232 ERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
ER++SEME ELK L K +NQRLKDENGALIRVISKLSK
Sbjct: 993 ERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKLSK 1032
>sp|O14974|MYPT1_HUMAN Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens
GN=PPP1R12A PE=1 SV=1
Length = 1030
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 67/100 (67%), Gaps = 10/100 (10%)
Query: 182 DYKKLYEESQAELSRLRETLSKTEEELNQVK-----AT-----YSKNSLSEQEKRERRTM 231
D+KKLYE+ AE +L+ L T EL +K AT ++ SL E EKRERR +
Sbjct: 931 DFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERFADRSLLEMEKRERRAL 990
Query: 232 ERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
ER++SEME ELK L K +NQRLKDENGALIRVISKLSK
Sbjct: 991 ERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKLSK 1030
>sp|Q8BG95|MYPT2_MOUSE Protein phosphatase 1 regulatory subunit 12B OS=Mus musculus
GN=Ppp1r12b PE=1 SV=2
Length = 976
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 12/107 (11%)
Query: 177 ENGELDYKKLYEESQAELSRLRETLSKTEEELNQVKA------------TYSKNSLSEQE 224
E+ DYKKLYE + E +L+ L + + EL +KA T ++S+ E E
Sbjct: 870 EDSNRDYKKLYESALTENQKLKTKLQEAQLELADIKAKLEKMAQQKQEKTSDRSSVLEVE 929
Query: 225 KRERRTMERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
KRERR +ERK+SEME E+K L + K +NQRLKDENGALIRVISKLSK
Sbjct: 930 KRERRALERKMSEMEEEMKVLTELKSDNQRLKDENGALIRVISKLSK 976
>sp|O60237|MYPT2_HUMAN Protein phosphatase 1 regulatory subunit 12B OS=Homo sapiens
GN=PPP1R12B PE=1 SV=2
Length = 982
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 12/107 (11%)
Query: 177 ENGELDYKKLYEESQAELSRLRETLSKTEEELNQVKA------------TYSKNSLSEQE 224
E+ DYKKLYE + E +L+ L + + EL +K+ T ++S+ E E
Sbjct: 876 EDSNRDYKKLYESALTENQKLKTKLQEAQLELADIKSKLEKVAQQKQEKTSDRSSVLEME 935
Query: 225 KRERRTMERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
KRERR +ERK+SEME E+K L + K +NQRLKDENGALIRVISKLSK
Sbjct: 936 KRERRALERKMSEMEEEMKVLTELKSDNQRLKDENGALIRVISKLSK 982
>sp|Q9DBR7|MYPT1_MOUSE Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus
GN=Ppp1r12a PE=1 SV=2
Length = 1029
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 66/100 (66%), Gaps = 10/100 (10%)
Query: 182 DYKKLYEESQAELSRLRETLSKTEEELNQVK-----AT-----YSKNSLSEQEKRERRTM 231
D+KKLYE+ AE +L+ L T EL +K AT ++ S E EKRERR +
Sbjct: 930 DFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERFADRSQLEMEKRERRAL 989
Query: 232 ERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
ER++SEME ELK L K +NQRLKDENGALIRVISKLSK
Sbjct: 990 ERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKLSK 1029
>sp|Q3UMT1|PP12C_MOUSE Protein phosphatase 1 regulatory subunit 12C OS=Mus musculus
GN=Ppp1r12c PE=1 SV=1
Length = 782
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 11/100 (11%)
Query: 183 YKKLYEESQAELSRLRETLSKTEEELNQVKATYSKN-----------SLSEQEKRERRTM 231
++K+Y E + E RLRE L++T L Q+K + +L E E+ ERR +
Sbjct: 683 FRKMYTELRRENERLREALTETTLRLAQLKVELERATQRQERFAERPALLELERFERRAL 742
Query: 232 ERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
ERK +E+E ELK L + +NQRLKDEN ALIRVISKLSK
Sbjct: 743 ERKAAELEEELKALSDLRADNQRLKDENAALIRVISKLSK 782
>sp|Q9BZL4|PP12C_HUMAN Protein phosphatase 1 regulatory subunit 12C OS=Homo sapiens
GN=PPP1R12C PE=1 SV=1
Length = 782
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 183 YKKLYEESQAELSRLRETLSKTEEELNQVKATYSKN-----------SLSEQEKRERRTM 231
++ LY E + E RLRE L++T L Q+K + +L E E+ ERR +
Sbjct: 683 FRTLYAELRRENERLREALTETTLRLAQLKVELERATQRQERFAERPALLELERFERRAL 742
Query: 232 ERKLSEMEVELKELDQFKKENQRLKDENGALIRVISKLSK 271
ERK +E+E ELK L + +NQRLKDEN ALIRVISKLSK
Sbjct: 743 ERKAAELEEELKALSDLRADNQRLKDENAALIRVISKLSK 782
>sp|Q90623|MYPT1_CHICK Protein phosphatase 1 regulatory subunit 12A OS=Gallus gallus
GN=PPP1R12A PE=1 SV=1
Length = 1004
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 151 SGGDNLSTSRSRVNSESGGSSRK-----LPNENGELDYKKLYEESQAELSRLRETLSKTE 205
S GD +++ R S+S RK L E+ D+KKLYE+ AE +L+ L T
Sbjct: 895 SSGDRYDSAQGRSGSQSYLEDRKPYCSRLEKEDS-TDFKKLYEQILAENEKLKAQLHDTN 953
Query: 206 EELNQVKATYSKNSLSEQEKRERRTMERKLSEME 239
EL +K K + +R+ R +R L EME
Sbjct: 954 MELTDLKLQLEKTT-----QRQERFADRSLLEME 982
>sp|Q9Z220|TSG10_RAT Testis-specific gene 10 protein OS=Rattus norvegicus GN=Tsga10 PE=1
SV=2
Length = 712
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 111 SKSSTRSANYTPEGGGRMSRSGSTTS--LNSLRSEAPSEGYESGGDNLSTSRSRVNSESG 168
S+ ST + + RM R T+ L + E +E DNL ++V E+
Sbjct: 310 SRQSTEALIMCEQDISRMRRQLDETNDELGQIARERDILAHE--NDNLQEQFAKVKQENQ 367
Query: 169 GSSRKLPNENGEL-DYKKLYEESQAELSRLRETLSKTEEELNQVKATYSKNSLSEQEKRE 227
S+KL + + EL D K+ +++ E+++L+ L K+EE N ++ KN L +E
Sbjct: 368 ALSKKLNDTHNELSDIKQKVQDTNLEVNKLKNIL-KSEESTN-LEVNKLKNILKSEESEN 425
Query: 228 RRTMER 233
R+ ME+
Sbjct: 426 RQIMEQ 431
>sp|Q6GNW0|LRRF2_XENLA Leucine-rich repeat flightless-interacting protein 2 OS=Xenopus
laevis GN=lrrfip2 PE=2 SV=2
Length = 729
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 199 ETLSKTEEELNQVKATYSKNSLSEQEKRERR-----TMERKLSEMEVELKELDQFKKENQ 253
+TL EE+ + A Y + + + ++ ER+ ++ KL E + +++ D+F +ENQ
Sbjct: 409 DTLKDVIEEMEEQMAEYHRENEEKSKELERQKHNCSILQHKLDEHKEGIRQRDEFIEENQ 468
Query: 254 RLKDENGALIRVISKL 269
R++ +L+R + L
Sbjct: 469 RMQQRVDSLVREVYDL 484
>sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3
Length = 2363
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 141 RSEAPSEGYESGGDNLSTSRSRVNSESGGSSRKLPNENGELDYKKLYEESQAELSRLRET 200
++E S+ ES +NL + S +E+ R L + +L Q+ELSRLR+
Sbjct: 1485 QAETKSKSLESQVENLQKTLSEKETEA----RNLQEQTVQL---------QSELSRLRQD 1531
Query: 201 LSK---TEEELNQVKATYSKNSLSEQEKRERRTMERKLSEMEVELKELDQFKKENQRLKD 257
L EE+L Q ++E+E++ R+ + S++ DQ KEN+ LK
Sbjct: 1532 LQDRTTQEEQLRQ--------QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQ 1583
Query: 258 ENGAL 262
NGAL
Sbjct: 1584 RNGAL 1588
>sp|Q6NY15|TSG10_MOUSE Testis-specific gene 10 protein OS=Mus musculus GN=Tsga10 PE=1 SV=1
Length = 697
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 111 SKSSTRSANYTPEGGGRMSRSGSTTS--LNSLRSEAPSEGYESGGDNLSTSRSRVNSESG 168
S+ ST + + RM R T+ L + E +E DNL ++V E+
Sbjct: 312 SRQSTEALIMCEQDISRMRRQLDETNDELGQIARERDILAHE--NDNLQEQFAKVKQENQ 369
Query: 169 GSSRKLPNENGEL-DYKKLYEESQAELSRLRETLSKTEEELNQV 211
S+KL + + EL D K+ +++ E+++L+ L E E Q+
Sbjct: 370 ALSKKLNDTHNELSDIKQKVQDTNLEVNKLKNILKSEESENRQI 413
>sp|Q6S003|KIF8_DICDI Kinesin-related protein 8 OS=Dictyostelium discoideum GN=kif8 PE=2
SV=1
Length = 1873
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 185 KLYEESQAELSRLRETLSKTEEELNQVKATYSK-NSLSEQEKRERRTMERKLSEMEVE-- 241
+L+E ELS L + +S+ EEEL + T + + EQ ++ + ++ +L E+ VE
Sbjct: 713 ELFENDSEELSDLNQYISEKEEELELISKTKQQYQQMKEQFDQKVKELQSQLEEVTVEKD 772
Query: 242 --LKEL 245
LKEL
Sbjct: 773 QALKEL 778
>sp|Q9JMH9|MY18A_MOUSE Unconventional myosin-XVIIIa OS=Mus musculus GN=Myo18a PE=1 SV=2
Length = 2050
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 128 MSRSGSTTSLNSLRSEAPSEGYESGGDNLSTSRSRVNSESGGSSRKLPNENGELDYKKLY 187
+ +G T + SL +E + D S ++V + K+ ++ ELD
Sbjct: 1503 LDIAGFTQKVVSLEAELQDISSQESKDE--ASLAKVKKQLRDLEAKVKDQEEELD----- 1555
Query: 188 EESQAELSRLRETLSKTEEELNQVKATYSKNSLSEQEKRE--RRTMERKLSEMEVELKE 244
E + L + + E E+ +++ T+SK S E+ E R++ ++KL +MEV+L+E
Sbjct: 1556 -EQAGSIQMLEQAKLRLEMEMERMRQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLEE 1613
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.300 0.118 0.312
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,336,761
Number of Sequences: 539616
Number of extensions: 4482373
Number of successful extensions: 39199
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 2379
Number of HSP's that attempted gapping in prelim test: 29302
Number of HSP's gapped (non-prelim): 9302
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 60 (27.7 bits)