BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9551
(250 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BG95|MYPT2_MOUSE Protein phosphatase 1 regulatory subunit 12B OS=Mus musculus
GN=Ppp1r12b PE=1 SV=2
Length = 976
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 35 EDSEGEKSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLVKKKQQQQLV 94
E E +S++ PVRDEE+E+ RKA +++ R+TRRSTQGVTL +L+ AE+ + + ++
Sbjct: 610 EAREKRRSYLTPVRDEEAESLRKARSRQARQTRRSTQGVTLTDLQEAEKTFSRSRAER-- 667
Query: 95 QASQQPSPEKETPDTSEVSNSQPVAISATITPSPSPTINNSGERR 139
QA +QP + E P E S + PS +PT +GE R
Sbjct: 668 QAQEQPGEKLEDPGGLEGSTKKQ-------EPSAAPT-KGAGEGR 704
>sp|O60237|MYPT2_HUMAN Protein phosphatase 1 regulatory subunit 12B OS=Homo sapiens
GN=PPP1R12B PE=1 SV=2
Length = 982
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 10/94 (10%)
Query: 35 EDSEGEKSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLVKKKQQQQLV 94
E E +S++ PVRDEE+E+ RKA +++ R+TRRSTQGVTL +L+ AE+ + + ++
Sbjct: 611 EAREKRRSYLTPVRDEEAESLRKARSRQARQTRRSTQGVTLTDLQEAERTFSRSRAER-- 668
Query: 95 QASQQPSPEKETP-DTSEVSNS----QPVAISAT 123
QA +QP +E P DT + S +P A+ AT
Sbjct: 669 QAQEQP---REKPTDTEGLEGSPEKHEPSAVPAT 699
>sp|Q3UMT1|PP12C_MOUSE Protein phosphatase 1 regulatory subunit 12C OS=Mus musculus
GN=Ppp1r12c PE=1 SV=1
Length = 782
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 41 KSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLVKK 87
+S+ PVRDEESE+QRKA ++ +R++RRSTQGVTL +LK AE++ K
Sbjct: 531 RSYQMPVRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKVAGK 577
>sp|Q9BZL4|PP12C_HUMAN Protein phosphatase 1 regulatory subunit 12C OS=Homo sapiens
GN=PPP1R12C PE=1 SV=1
Length = 782
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 41 KSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLVKKKQQQQLVQASQQP 100
+S+ PVRDEESE+QRKA ++ +R++RRSTQGVTL +LK AE+ K + + S P
Sbjct: 531 RSYQMPVRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKAPESEKPAQSLDP 590
Query: 101 S 101
S
Sbjct: 591 S 591
>sp|Q90623|MYPT1_CHICK Protein phosphatase 1 regulatory subunit 12A OS=Gallus gallus
GN=PPP1R12A PE=1 SV=1
Length = 1004
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 39/45 (86%)
Query: 41 KSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLV 85
+S++ PVRDEESE+QRKA +++ R++RRSTQGVTL +L+ AE+ +
Sbjct: 666 RSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTI 710
>sp|O14974|MYPT1_HUMAN Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens
GN=PPP1R12A PE=1 SV=1
Length = 1030
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 39/45 (86%)
Query: 41 KSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLV 85
+S++ PVRDEESE+QRKA +++ R++RRSTQGVTL +L+ AE+ +
Sbjct: 667 RSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTI 711
>sp|Q10728|MYPT1_RAT Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus
GN=Ppp1r12a PE=1 SV=2
Length = 1032
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 39/45 (86%)
Query: 41 KSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLV 85
+S++ PVRDEESE+QRKA +++ R++RRSTQGVTL +L+ AE+ +
Sbjct: 668 RSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTI 712
>sp|Q9DBR7|MYPT1_MOUSE Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus
GN=Ppp1r12a PE=1 SV=2
Length = 1029
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 39/45 (86%)
Query: 41 KSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLV 85
+S++ PVRDEESE+QRKA +++ R++RRSTQGVTL +L+ AE+ +
Sbjct: 665 RSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTI 709
>sp|Q6DRG7|MYPT1_DANRE Protein phosphatase 1 regulatory subunit 12A OS=Danio rerio
GN=ppp1r12a PE=2 SV=2
Length = 1049
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 31 TLKKEDSEGEKSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEELKSAEQLVKK 87
L + E +S++ PVRDEESE+QRKA +++ R++RRSTQGVTL +L+ AE+ + +
Sbjct: 686 VLGSDGRERRRSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGR 742
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.121 0.326
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,303,605
Number of Sequences: 539616
Number of extensions: 3778916
Number of successful extensions: 18611
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 714
Number of HSP's that attempted gapping in prelim test: 16693
Number of HSP's gapped (non-prelim): 2203
length of query: 250
length of database: 191,569,459
effective HSP length: 115
effective length of query: 135
effective length of database: 129,513,619
effective search space: 17484338565
effective search space used: 17484338565
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 60 (27.7 bits)