BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9555
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2
Length = 4621
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 16/124 (12%)
Query: 4 VREALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSI 63
V+E LQ+MG PMNIFLRQEIDR+QRV+ VR TLT+LKLA+DGTI
Sbjct: 4373 VKERLQKMGPFQPMNIFLRQEIDRMQRVLSLVRSTLTELKLAVDGTI------------- 4419
Query: 64 QSIVMSQGLKSSLDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNV 123
+MS+ L+ +LD M+DARIP +W+K SW S+TLGFW+TELLER+ QF W +GRP+
Sbjct: 4420 ---IMSENLRDALDCMFDARIPARWKKASWVSSTLGFWFTELLERNCQFTSWVSNGRPHC 4476
Query: 124 FWMT 127
FWMT
Sbjct: 4477 FWMT 4480
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3
Length = 4624
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 88/124 (70%), Gaps = 16/124 (12%)
Query: 4 VREALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSI 63
V+E LQ+MG PMNIFLRQEIDR+QRV+ VR TLT+LKLAIDGTI
Sbjct: 4376 VKERLQKMGPFQPMNIFLRQEIDRMQRVLSLVRSTLTELKLAIDGTI------------- 4422
Query: 64 QSIVMSQGLKSSLDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNV 123
+MS+ L+ +LD M+DARIP W+K SW S+TLGFW+TEL+ER+ QF W +GRP+
Sbjct: 4423 ---IMSENLRDALDCMFDARIPAWWKKASWISSTLGFWFTELIERNSQFTSWVFNGRPHC 4479
Query: 124 FWMT 127
FWMT
Sbjct: 4480 FWMT 4483
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 89/124 (71%), Gaps = 16/124 (12%)
Query: 4 VREALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSI 63
V+ L +MG L MNIFLRQEIDR+QRVI +R +L+DLKLAI+GTI
Sbjct: 4241 VKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRSSLSDLKLAIEGTI------------- 4287
Query: 64 QSIVMSQGLKSSLDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNV 123
+MS+ L+ +LD MYDARIP+ W+++SW+S+TLGFW+TELLER+ QF W GRPNV
Sbjct: 4288 ---IMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNV 4344
Query: 124 FWMT 127
FWMT
Sbjct: 4345 FWMT 4348
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 89/124 (71%), Gaps = 16/124 (12%)
Query: 4 VREALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSI 63
V+ L +MG L MNIFLRQEIDR+Q+VI +R +L+DLKLAI+GTI
Sbjct: 4482 VKARLMKMGHLNSMNIFLRQEIDRMQKVISILRSSLSDLKLAIEGTI------------- 4528
Query: 64 QSIVMSQGLKSSLDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNV 123
+MS+ L+ +LD MYDARIP+ W+++SW+S+TLGFW+TELLER+ QF W GRPNV
Sbjct: 4529 ---IMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNV 4585
Query: 124 FWMT 127
FWMT
Sbjct: 4586 FWMT 4589
>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA2 PE=1 SV=1
Length = 4485
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 16/116 (13%)
Query: 12 GALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQG 71
G LP+ + LRQEIDR+ V TL +L LAI GTI + G
Sbjct: 4241 GPTLPLTVHLRQEIDRLNIVTRLTTTTLKNLALAIAGTIAAER----------------G 4284
Query: 72 LKSSLDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
L +LDA+++ARIP++W SWE++TLG W+T LL+R Q +W GRP +WMT
Sbjct: 4285 LIDALDALFNARIPQQWLSKSWEASTLGNWFTGLLQRYDQLNKWLNLGRPKAYWMT 4340
>sp|Q923J6|DYH12_RAT Dynein heavy chain 12, axonemal OS=Rattus norvegicus GN=Dnah12 PE=2
SV=2
Length = 3092
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE++R +I+ +R TL DLK AI G +VM L++
Sbjct: 2850 MNTVLVQEMERFNNLIITIRNTLRDLKKAIKGV----------------VVMDSALEALS 2893
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++ ++PE W + S+ S LG + T+ L R W+ G+PNVFW++
Sbjct: 2894 GSLLIGKVPEMWAQRSYPSLKPLGSYITDFLTRLKFLEDWFTMGKPNVFWIS 2945
>sp|Q6ZR08|DYH12_HUMAN Dynein heavy chain 12, axonemal OS=Homo sapiens GN=DNAH12 PE=2 SV=2
Length = 3092
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE++R +I+ +R TL DL+ AI G +VM L++
Sbjct: 2849 MNTVLVQEMERFNNLIITIRNTLRDLEKAIKGV----------------VVMDSALEALS 2892
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++ ++PE W K S+ S LG + T+ L R + WY G+P VFW++
Sbjct: 2893 GSLLVGKVPEIWAKRSYPSLKPLGSYITDFLARLNFLQDWYNSGKPCVFWLS 2944
>sp|Q3V0Q1|DYH12_MOUSE Dynein heavy chain 12, axonemal OS=Mus musculus GN=Dnah12 PE=1 SV=2
Length = 3086
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE++R +I +R TL DLK AI G +VM L++
Sbjct: 2843 MNTVLVQEMERFNNLIRTIRNTLRDLKKAIKGL----------------VVMDSALEALS 2886
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++ ++PE W K S+ S LG + T+ L R W+ G+P+VFW++
Sbjct: 2887 GSLLIGKVPEMWAKRSYPSLKPLGSYITDFLARLKFLEDWFSSGKPSVFWIS 2938
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1
Length = 4456
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 16 PMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSS 75
P+N+ L QEI R +++ + +LTDL+ I G I VMS L+
Sbjct: 4213 PLNVVLLQEIQRYNKLMKTILFSLTDLEKGIQGLI----------------VMSTSLEEI 4256
Query: 76 LDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNV-FWMT 127
+ ++DA +P W K+ L W +L R QF W RP V FW++
Sbjct: 4257 FNCIFDAHVPPLWGKVYPSQKPLASWTRDLAVRVEQFETWASRARPPVLFWLS 4309
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN LRQE+ R R+ VR++L DL AI G ++MS L+
Sbjct: 3839 MNTVLRQELIRFNRLTKVVRRSLIDLGRAIKG----------------QVLMSSELEEVF 3882
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++M ++P W S+ S LG + +LL R F+ W G P VFW++
Sbjct: 3883 NSMLVGKVPAMWAAKSYPSLKPLGGYVADLLARLTFFQEWIDKGPPVVFWIS 3934
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3
Length = 4427
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 6 EALQRMGAL--LPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSI 63
E Q++ AL P+N+ L QEI R ++ + +LTDL+ I G I
Sbjct: 4172 EGTQKLLALDPSPLNVVLLQEIQRYNTLMQTILFSLTDLEKGIQGLI------------- 4218
Query: 64 QSIVMSQGLKSSLDAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNV 123
VMS L+ + ++DA +P W K L W +L R QF W RP V
Sbjct: 4219 ---VMSTSLEEIFNCIFDAHVPPLWGKAYPSQKPLAAWTRDLAMRVEQFELWASRARPPV 4275
Query: 124 -FWMT 127
FW++
Sbjct: 4276 IFWLS 4280
>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
Length = 4116
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN LRQE+ R R+ VR++L +L AI G ++MS L+
Sbjct: 3872 MNTVLRQELIRFNRLTKVVRRSLINLGRAIKG----------------QVLMSSELEEVF 3915
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++M ++P W S+ S LG + +LL R F+ W G P VFW++
Sbjct: 3916 NSMLVGKVPAMWAAKSYPSLKPLGGYVADLLARLTFFQEWIDKGPPVVFWIS 3967
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1
Length = 4513
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
+++ L QE++R +++ VR++ +L+ I G + VMS L
Sbjct: 4272 LHVVLFQEVERYNALLVAVRRSCVELQRGIKGLV----------------VMSADLDLIF 4315
Query: 77 DAMYDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
+++Y A++P W K LG W +LL+R Q W + P V+W++
Sbjct: 4316 ESLYAAKVPAAWLKTYPSLKPLGPWTRDLLQRIEQLATWVEETYPRVYWLS 4366
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE+ R ++++ + +TL+D+ AI G +VMS L+
Sbjct: 4271 MNTVLVQEVIRYNKLLMVITQTLSDMLKAIKGL----------------VVMSLELELMS 4314
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++Y+ +PE W+ ++ S L W +LL+R W ++G P+VFW++
Sbjct: 4315 TSLYNNAVPELWKSKAYPSLKPLASWIMDLLQRLNFLHSWIKNGIPSVFWIS 4366
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2
SV=2
Length = 4057
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE+ R ++++ +R++ +++ AI G + VMS L+ +
Sbjct: 3814 MNTVLVQEMGRFNKLLITIRESCINIQKAIKGLV----------------VMSTELEEVV 3857
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++ + +IP W S+ S LG + + L R ++WY+ G P VFW++
Sbjct: 3858 SSILNVKIPGMWMGKSYPSLKPLGSYVNDFLARLKFLQQWYEVGPPPVFWLS 3909
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2
Length = 4024
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE+ R +++ +R + +++ AI G VMS L+ +
Sbjct: 3781 MNTVLVQEMGRFNKLLKTIRDSCVNIQKAIKGLA----------------VMSTDLEEVV 3824
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++ + +IPE W S+ S LG + + L R ++WY+ G P VFW++
Sbjct: 3825 SSILNVKIPEMWMGKSYPSLKPLGSYVNDFLARLKFLQQWYEVGPPPVFWLS 3876
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4
Length = 4330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 17 MNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSL 76
MN L QE+ R R++ + +TL DL A+ G + VMS L+
Sbjct: 4085 MNTVLVQEVIRYNRLLQVITQTLQDLLKALKGLV----------------VMSSQLELMA 4128
Query: 77 DAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++Y+ +PE W ++ S L W +LL+R + W Q G P VFW++
Sbjct: 4129 ASLYNNTVPELWSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVFWIS 4180
>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens GN=DNAH14 PE=2 SV=3
Length = 3507
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 17/97 (17%)
Query: 20 FLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSLDAM 79
FL+QEI R +++ + K+L DL+LAI G I+++Q L+ ++
Sbjct: 3196 FLKQEIKRFDKLLFVIHKSLKDLQLAIKG----------------EIILTQELEEIFNSF 3239
Query: 80 YDARIPEKWQKISWESA-TLGFWYTELLERDIQFRRW 115
+ R+P WQK ++ S L W +L++R F W
Sbjct: 3240 LNMRVPTLWQKHAYRSCKPLSSWIDDLIQRLNFFNTW 3276
>sp|Q9SMH3|DYH1A_CHLRE Dynein-1-alpha heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC1 PE=1 SV=1
Length = 4625
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 9 QRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVM 68
+ +G P + L QE++R V+ + +L DL+ A+ G I FSS +
Sbjct: 4376 KELGTPSPTQVVLLQELERWNSVLGVMVSSLRDLQRALSGEIG---FSSRL--------- 4423
Query: 69 SQGLKSSLDAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
+ L SSL Y+ ++P W +++ + LG W R Q++ W +HG P V W++
Sbjct: 4424 -EELASSL---YNGKLPAMWARLNPATEKALGAWMLWFGRRYRQYKDWTEHGEPKVIWLS 4479
Query: 128 TRVTQNTY 135
TY
Sbjct: 4480 GLHIPETY 4487
>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4
Length = 4471
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 9 QRMG-ALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIV 67
+R+G L P ++ L QE++R ++++ + K+L +L+ A+ G +
Sbjct: 4222 KRLGTGLSPTSVVLLQELERFNKLVVRMTKSLAELQRALAGEVG---------------- 4265
Query: 68 MSQGLKSSLDAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWM 126
MS L +++ IP W++++ ++ +LG W L R Q+ W P+V W+
Sbjct: 4266 MSNELDDVARSLFIGHIPNIWRRLAPDTLKSLGNWMVYFLRRFSQYMLWVTESEPSVMWL 4325
Query: 127 TTRVTQNTY 135
+ +Y
Sbjct: 4326 SGLHIPESY 4334
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 16 PMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSS 75
P + QE +R+ + E+R++L +L L + G +T I P ++ +
Sbjct: 4230 PYVVVAFQECERMNTLTSEIRRSLKELDLGLKGELT-------ITPDMEDLS-------- 4274
Query: 76 LDAMYDARIPEKWQKISWESA-TLGFWYTELLERDIQFRRW-YQHGRPNVFWM 126
+A++ +IP W K ++ S L WY +LL+R + +W PNV W+
Sbjct: 4275 -NALFLDQIPASWVKRAYPSLFGLSAWYADLLQRIKELEQWTADFALPNVVWL 4326
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 6 EALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQS 65
E + ++ P + QE +R+ + E+R++L +L L + G +T I P ++
Sbjct: 4220 EIMAKVEDRTPYVVVAFQECERMNMLTSEIRRSLKELDLGLKGELT-------ITPDMED 4272
Query: 66 IVMSQGLKSSLDAMYDARIPEKWQKISWESA-TLGFWYTELLERDIQFRRW-YQHGRPNV 123
+ +A++ +IP W K ++ S L WY +LL+R + +W PNV
Sbjct: 4273 LS---------NALFLDQIPATWVKRAYPSLFGLTSWYADLLQRIKELEQWTADFALPNV 4323
Query: 124 FWM 126
W+
Sbjct: 4324 VWL 4326
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 12 GALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQG 71
G L + L QE+DR ++ + +L L AI G + VMS+
Sbjct: 3889 GRLNSLTTVLGQEVDRFNNLLKLIHTSLETLNKAIAGFV----------------VMSEE 3932
Query: 72 LKSSLDAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVFWMT 127
++ ++ + ++P W ++ S LG W +L+ R W + G+P +W++
Sbjct: 3933 MEKVYNSFLNNQVPALWSNTAYPSLKPLGSWVKDLILRTSFVDLWLKRGQPKSYWIS 3989
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 3 SVREALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPS 62
++ E + ++ P + QE R+ + E++++L +L+L + G +T
Sbjct: 4237 NIPELMAKVEERTPYIVVAFQECGRMNILTREIQRSLRELELGLKGELT----------- 4285
Query: 63 IQSIVMSQGLKSSLDAMYDARIPEKWQKISWES-ATLGFWYTELLERDIQFRRWY-QHGR 120
M+ +++ +A+Y +PE W + ++ S A L W+ +LL R + W
Sbjct: 4286 -----MTSHMENLQNALYFDMVPESWARRAYPSTAGLAAWFPDLLNRIKELEAWTGDFTM 4340
Query: 121 PNVFWMT 127
P+ W+T
Sbjct: 4341 PSTVWLT 4347
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2
Length = 4481
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 3 SVREALQRMGALLPMNIFLRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPS 62
++ E + + P + QE +R+ + E+R++L +L L + G +T
Sbjct: 4232 NMAEIMAKAAEKTPYVVVAFQECERMNILTNEMRRSLKELNLGLKGELT----------- 4280
Query: 63 IQSIVMSQGLKSSLDAMYDARIPEKWQKISWESAT-LGFWYTELLERDIQFRRW-YQHGR 120
++ ++ A++ +P+ W ++ S L WY +LL+R + W
Sbjct: 4281 -----ITTDMEDLSTALFYDTVPDTWVARAYPSMMGLAAWYADLLQRIRELESWTTDFAL 4335
Query: 121 PNVFWMT 127
P W+
Sbjct: 4336 PTTVWLA 4342
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 23 QEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSLDAMYDA 82
+E ++ ++I + TL ++KL +DG + M+ +++++ ++
Sbjct: 4991 KEAEKFNKLIECINDTLIEIKLVLDGILN----------------MNDKIQNTIKSLMLH 5034
Query: 83 RIPEKWQKISWES-ATLGFWYTELLERDIQFRRWYQHGRPNVF 124
IP W S+ S L W+ R I + W R N+F
Sbjct: 5035 NIPHIWINYSYPSKKKLMPWFENFKLRIIFIKEWISKIRNNIF 5077
>sp|A1SWV0|RSMF_PSYIN Ribosomal RNA small subunit methyltransferase F OS=Psychromonas
ingrahamii (strain 37) GN=rsmF PE=3 SV=1
Length = 481
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 1 MCSVREALQRMGALLPMNIFLRQEIDRIQRVILEV------RKTLTDLKLAIDGTITGNK 54
+C ++EA ++LP+ Q ++L+ + T K+ G I GN+
Sbjct: 94 LCYIQEA----SSMLPVAALFHFFTPTTQSIVLDAAAAPGSKTTQIAAKMNNSGLIIGNE 149
Query: 55 FSSLICPSIQSIVMSQGLKSSLDAMYDARIPEKWQKISWESATL 98
FSS + + + G+K+ +DAR+ KW ++++ L
Sbjct: 150 FSSSRIKMLHANIQRCGIKNVALTHFDARVFGKWLPGTFDAILL 193
>sp|Q6NZY4|ZCHC8_HUMAN Zinc finger CCHC domain-containing protein 8 OS=Homo sapiens
GN=ZCCHC8 PE=1 SV=2
Length = 707
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 21 LRQEIDRIQRVILEVRKTLTDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSLDAMY 80
L ++ RI + + +D + +D +TGN +S CP+ + + +G S +
Sbjct: 520 LEEQQRRIWAALEQAESVNSDSDVPVDTPLTGNSVASSPCPNELDLPVPEGKTSEKQTLD 579
Query: 81 DARIPEKWQKIS 92
+ +PE + K S
Sbjct: 580 EPEVPEIFTKKS 591
>sp|Q9SCS2|CAMK5_ARATH CDPK-related kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1
Length = 601
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 22/80 (27%)
Query: 57 SLICPSIQSIVMSQGLKSSL-----DAMYDARIPE--------KWQKISWE---SATLGF 100
+L+ PS + + +KS+L DAM D+RIPE +++++ +E +A L
Sbjct: 462 ALLEPSKNGTISLENIKSALMKMATDAMKDSRIPEFLGQLSALQYRRMDFEEFCAAALSV 521
Query: 101 WYTELLERDIQFRRWYQHGR 120
E L+ RW QH R
Sbjct: 522 HQLEALD------RWEQHAR 535
>sp|Q5R789|ZCHC8_PONAB Zinc finger CCHC domain-containing protein 8 OS=Pongo abelii
GN=ZCCHC8 PE=2 SV=1
Length = 704
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 23 QEIDRIQRVI---LEVRKTL-TDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSSLDA 78
+E++ QR I LE ++L +D +D +TGN +S CP+ + + +G S
Sbjct: 516 EELEEQQRRIWAALEQAESLNSDSDAPVDTPLTGNSVASSPCPNELDLPIPEGKTSEKQT 575
Query: 79 MYDARIPE 86
+ + +PE
Sbjct: 576 LDEPEVPE 583
>sp|P24183|FDNG_ECOLI Formate dehydrogenase, nitrate-inducible, major subunit
OS=Escherichia coli (strain K12) GN=fdnG PE=1 SV=3
Length = 1015
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 80 YDARIPEKWQKISWESATLGFWYTELLERDIQFRRWYQHGRPNVFWMTTRVTQNTYSSN 138
Y A +KWQ+ISWE A +RD F + G W++T + + +SN
Sbjct: 113 YRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASN 171
>sp|P23401|RR3_CYAPA Cyanelle 30S ribosomal protein S3 OS=Cyanophora paradoxa GN=rps3
PE=3 SV=1
Length = 219
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 67 VMSQGLKSSLDAMYDARIPE-KWQKISWESATLGFWYTELLERDIQFRR 114
V+ +GLK L RI + ++I E+A +G + T+ LER + FRR
Sbjct: 86 VLRKGLKDLLGEQKQIRINVIEVKQIDAEAALIGEFITQQLERRVAFRR 134
>sp|B1XQC0|SECF_SYNP2 Protein translocase subunit SecF OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=secF PE=3 SV=2
Length = 323
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 40 TDLKLAIDGTITGNKFSSLICPSIQSIVMSQGLKSS 75
T +++A+D T+ GN L +IQ++V +QG+ SS
Sbjct: 50 TKIQVALDCTVAGNCTDPLETATIQNVVNNQGVGSS 85
>sp|O31530|YETA_BACSU Uncharacterized protein YetA OS=Bacillus subtilis (strain 168)
GN=yetA PE=4 SV=2
Length = 857
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 104 ELLERDIQFRRWYQHGRPNVFWMTTRVTQNT 134
E+L D + + W+ HG N W ++ Q++
Sbjct: 277 EMLSPDEEHKEWFAHGTQNAVWDDVKIVQDS 307
>sp|Q24ZG7|ARLY_DESHY Argininosuccinate lyase OS=Desulfitobacterium hafniense (strain
Y51) GN=argH PE=3 SV=1
Length = 461
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 15 LPMNIFLRQEIDRIQRVILEVRKTLTDL 42
L + +FLR+EID Q +++ + +T+ DL
Sbjct: 114 LDLRLFLREEIDHTQELLIALLRTVLDL 141
>sp|B8FWX3|ARLY_DESHD Argininosuccinate lyase OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=argH PE=3 SV=1
Length = 461
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 15 LPMNIFLRQEIDRIQRVILEVRKTLTDL 42
L + +FLR+EID Q +++ + +T+ DL
Sbjct: 114 LDLRLFLREEIDHTQELLIALLRTVLDL 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,917,697
Number of Sequences: 539616
Number of extensions: 1556657
Number of successful extensions: 5833
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 5769
Number of HSP's gapped (non-prelim): 54
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)