Query psy9556
Match_columns 62
No_of_seqs 101 out of 714
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 22:40:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9556.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9556hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bdsa_ g.9.1.1 (A:) BDs-I def 76.9 0.17 1.2E-05 23.4 -0.5 10 47-56 13-22 (43)
2 d2h7aa1 d.350.1.1 (A:2-110) Hy 59.6 3.7 0.00027 22.5 2.6 13 20-32 13-25 (109)
3 d2epqa1 g.37.1.1 (A:380-411) P 30.9 4.9 0.00036 17.2 0.0 7 19-25 3-9 (32)
4 d1xaua_ b.1.1.4 (A:) B and T l 24.6 7.6 0.00055 20.8 0.1 17 3-22 69-85 (104)
5 d1fs1b2 d.42.1.1 (B:2-68) Cycl 22.5 15 0.0011 17.3 1.0 22 38-59 2-23 (61)
6 d2drpa2 g.37.1.1 (A:140-165) T 21.4 12 0.00091 15.0 0.4 6 19-24 1-6 (26)
7 d1nb5i_ d.17.1.2 (I:) Cystatin 19.5 23 0.0017 18.6 1.4 28 17-44 35-62 (98)
8 d1stfi_ d.17.1.2 (I:) Cystatin 17.7 27 0.0019 18.3 1.4 27 18-44 36-62 (98)
9 d2j8xa1 c.18.1.1 (A:26-255) Ur 17.2 15 0.0011 22.1 0.3 14 45-58 110-123 (230)
10 d2hxma1 c.18.1.1 (A:82-304) Ur 16.2 16 0.0012 21.8 0.2 17 42-58 106-122 (223)
No 1
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=76.91 E-value=0.17 Score=23.36 Aligned_cols=10 Identities=40% Similarity=0.853 Sum_probs=8.2
Q ss_pred Cchheeehee
Q psy9556 47 PRHWTLRGVA 56 (62)
Q Consensus 47 p~~Wi~rGvA 56 (62)
-+.||+||++
T Consensus 13 gdlwilrgtc 22 (43)
T d1bdsa_ 13 GDLWILRGTC 22 (43)
T ss_dssp CEEECSCSSC
T ss_pred CcEEEEeccc
Confidence 4679999986
No 2
>d2h7aa1 d.350.1.1 (A:2-110) Hypothetical protein YcgL {Escherichia coli [TaxId: 562]}
Probab=59.56 E-value=3.7 Score=22.51 Aligned_cols=13 Identities=38% Similarity=0.761 Sum_probs=10.7
Q ss_pred EEeeceeeccCCC
Q psy9556 20 YECPIYRKPQRTD 32 (62)
Q Consensus 20 Y~cPvY~t~~R~~ 32 (62)
-.|=|||++.|.|
T Consensus 13 M~C~IYKS~kK~~ 25 (109)
T d2h7aa1 13 MFCVIYRSSKRDQ 25 (109)
T ss_dssp CCEEEEEETTSSS
T ss_pred eEEEEeccCCCCC
Confidence 3699999999875
No 3
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.94 E-value=4.9 Score=17.16 Aligned_cols=7 Identities=43% Similarity=1.303 Sum_probs=5.5
Q ss_pred eEEeece
Q psy9556 19 LYECPIY 25 (62)
Q Consensus 19 ~Y~cPvY 25 (62)
.|+||+-
T Consensus 3 p~~cpic 9 (32)
T d2epqa1 3 PYSCPVC 9 (32)
T ss_dssp SSEETTT
T ss_pred CcccchH
Confidence 5899984
No 4
>d1xaua_ b.1.1.4 (A:) B and T lymphocyte attenuator, Btla {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.60 E-value=7.6 Score=20.79 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=9.4
Q ss_pred eEEEEeeecCCCCCCCeEEe
Q psy9556 3 VIYIYAINTTAGKDPKLYEC 22 (62)
Q Consensus 3 vi~~~p~~~~~~~~~~~Y~c 22 (62)
|+||.|+.. .+.+.|.|
T Consensus 69 vLhF~pvl~---sDnGsYrC 85 (104)
T d1xaua_ 69 VLHFKPIHL---SDNGSYSC 85 (104)
T ss_dssp EEEETTCCG---GGCEEEEE
T ss_pred EEEeeeeee---cCCCceEE
Confidence 456666543 34466766
No 5
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.51 E-value=15 Score=17.28 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=15.6
Q ss_pred EEEecCCCCCchheeeheeecc
Q psy9556 38 SIDFETDNNPRHWTLRGVALLC 59 (62)
Q Consensus 38 ~~~L~t~~~p~~Wi~rGvAll~ 59 (62)
++.|.+.++..+.+-+.+|...
T Consensus 2 ~I~L~SsDg~~f~v~~~~a~~S 23 (61)
T d1fs1b2 2 SIKLQSSDGEIFEVDVEIAKQS 23 (61)
T ss_dssp EEEEECTTSCEEEEEGGGGGTC
T ss_pred eEEEEecCCCEEEecHHHHHHh
Confidence 3567777777777777777654
No 6
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=21.38 E-value=12 Score=15.01 Aligned_cols=6 Identities=50% Similarity=1.619 Sum_probs=4.3
Q ss_pred eEEeec
Q psy9556 19 LYECPI 24 (62)
Q Consensus 19 ~Y~cPv 24 (62)
.|-||+
T Consensus 1 vypcp~ 6 (26)
T d2drpa2 1 VYPCPF 6 (26)
T ss_dssp CEECTT
T ss_pred CcCCch
Confidence 378886
No 7
>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.46 E-value=23 Score=18.65 Aligned_cols=28 Identities=11% Similarity=0.067 Sum_probs=22.4
Q ss_pred CCeEEeeceeeccCCCcceEEEEEecCC
Q psy9556 17 PKLYECPIYRKPQRTDLKYVGSIDFETD 44 (62)
Q Consensus 17 ~~~Y~cPvY~t~~R~~~~~v~~~~L~t~ 44 (62)
...++.=-|+|+.=+|+||.+.+++--+
T Consensus 35 ~~~F~av~yktQvVAGtNYfIKV~vG~~ 62 (98)
T d1nb5i_ 35 YGKLEAVQYKTQVVAGTNYYIKVRAGDN 62 (98)
T ss_dssp CSCCEEEEEEEEESSEEEEEEEEECSSS
T ss_pred cceEEEEEEEEEEEcceeEEEEEEeCCC
Confidence 3467878899999999999888887544
No 8
>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.70 E-value=27 Score=18.32 Aligned_cols=27 Identities=4% Similarity=0.222 Sum_probs=21.4
Q ss_pred CeEEeeceeeccCCCcceEEEEEecCC
Q psy9556 18 KLYECPIYRKPQRTDLKYVGSIDFETD 44 (62)
Q Consensus 18 ~~Y~cPvY~t~~R~~~~~v~~~~L~t~ 44 (62)
..++.=-|+|+.=+|+||-+.+++--+
T Consensus 36 ~~f~av~yktQvVaG~NYfIKV~vg~~ 62 (98)
T d1stfi_ 36 PVFKAVSFKSQVVAGTNYFIKVHVGDE 62 (98)
T ss_dssp SCCEEEEEEEEESSEEEEEEEEECSSS
T ss_pred ceeEEEEEEEEEEcceeEEEEEEeCCC
Confidence 456777899999999999888876543
No 9
>d2j8xa1 c.18.1.1 (A:26-255) Uracil-DNA glycosylase {Epstein-Barr virus [TaxId: 10376]}
Probab=17.24 E-value=15 Score=22.05 Aligned_cols=14 Identities=36% Similarity=0.624 Sum_probs=11.2
Q ss_pred CCCchheeeheeec
Q psy9556 45 NNPRHWTLRGVALL 58 (62)
Q Consensus 45 ~~p~~Wi~rGvAll 58 (62)
.+-+.|..+||-||
T Consensus 110 g~L~~Wa~QGVLLL 123 (230)
T d2j8xa1 110 GCLDAWASQGVLLL 123 (230)
T ss_dssp CCCHHHHTTTEEEE
T ss_pred CChHHHhhCCEEee
Confidence 34567999999887
No 10
>d2hxma1 c.18.1.1 (A:82-304) Uracil-DNA glycosylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.22 E-value=16 Score=21.82 Aligned_cols=17 Identities=29% Similarity=0.560 Sum_probs=12.4
Q ss_pred cCCCCCchheeeheeec
Q psy9556 42 ETDNNPRHWTLRGVALL 58 (62)
Q Consensus 42 ~t~~~p~~Wi~rGvAll 58 (62)
|++.+-++|..+||-||
T Consensus 106 ~~~g~L~~Wa~QGVLLL 122 (223)
T d2hxma1 106 PGHGDLSGWAKQGVLLL 122 (223)
T ss_dssp CSSCCTHHHHHTTEEEE
T ss_pred CCccchhhhhcCCeEEE
Confidence 34455678999998766
Done!