BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9560
(503 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P05547|TNNI_PONLE Troponin I OS=Pontastacus leptodactylus PE=1 SV=1
Length = 201
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 144/169 (85%)
Query: 30 EELERKRAEVRRRMEEASGARRKKGFMTPERKKKLRLLLRKKAAEELKREQERRALERKR 89
++++RK+AEVR+R+EE S ++KKGFMTPERKKKLRLLLRKKAAEELK+EQER+A ER++
Sbjct: 15 DDIDRKKAEVRKRLEEQSLKKQKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAGERRK 74
Query: 90 VIDERCGEPKDTDDMAEDEIGDLCQEYWQRIYNLEAIKYELDREIMLKDFEITELGKQVN 149
+ID+RCG+PK+ D E+++ + +EY+ +E+ KY+++ EI+ KD+EI EL QVN
Sbjct: 75 IIDQRCGQPKNLDGANEEQLRAIIKEYFDHTAQIESDKYDVELEIIRKDYEINELNIQVN 134
Query: 150 DLRGKFVRPILKKVSKYENKFAKLQKKAAEFNFRSQLKAVKKREFSMED 198
DLRGKF++P LKKVSKYENKFAKLQKKAAEFNFR+QLK VKK+EF +ED
Sbjct: 135 DLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKTVKKKEFELED 183
>sp|P36188|TNNI_DROME Troponin I OS=Drosophila melanogaster GN=wupA PE=2 SV=3
Length = 269
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Query: 22 DEAKRLKLEELERKRAEVRRRMEEASGARRKK-GFMTPERKKKLRLLLRKKAAEELKREQ 80
+EAK+ K E+ERKRAEVR+RMEEAS A++ K GFMTPERKKKLRLLLRKKAAEELK+EQ
Sbjct: 65 EEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQ 124
Query: 81 ERRALERKRVIDERCGEPKDTDDMAEDEIGDLCQEYWQRIYNLEAIKYELDREIMLKDFE 140
ER+A ER+R+I+ERCG P++ D +E E+ ++C+EY++R+Y E K++L+ E+ KD+E
Sbjct: 125 ERKAAERRRIIEERCGSPRNLSDASEGELQEICEEYYERMYICEGQKWDLEYEVRKKDWE 184
Query: 141 ITELGKQVNDLRGKFVRPILKKVSKYENKFAKLQKKAAEFNFRSQLKAV 189
I +L QVNDLRGKFV+P LKKVSKYENKFAKLQKKAAEFNFR+QLK V
Sbjct: 185 INDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQKKAAEFNFRNQLKVV 233
>sp|O44572|TNNI4_CAEEL Troponin I 4 OS=Caenorhabditis elegans GN=tni-4 PE=2 SV=2
Length = 194
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 134/192 (69%), Gaps = 8/192 (4%)
Query: 22 DEAKRLKLEELERKRAEVRRRMEEASGARR-KKGFMTPERKKKLRLLLRKKAAEELKREQ 80
DEA+ K+ E ERK+ EVR+R+EEAS ++ KKGF+TPERKKKLR LL KAAE+LK++Q
Sbjct: 7 DEAR--KMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQ 64
Query: 81 ERRALERKRVIDERCGEPKDTDDMAEDEIGDLCQEYWQRIYNLEAIKYELDREIMLKDFE 140
+ ER+R++ ER D D+ ED++ + E +R+ +LE+ Y++ + KDFE
Sbjct: 65 MLKEQERQRILQERIIPLPDLDN--EDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFE 122
Query: 141 ITELGKQVNDLRGKFVRPILKKVSKYENKFAKLQKK-AAEFNFRSQLKAVKKREFSM--E 197
I EL VNDLRGKFV+P LKKVSK E KF KL+KK A + +FR+QLK V K EF++ E
Sbjct: 123 INELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEE 182
Query: 198 DAEKEKKPEWVK 209
D EK++K W K
Sbjct: 183 DTEKKEKAAWAK 194
>sp|Q20334|TNNI1_CAEEL Troponin I 1 OS=Caenorhabditis elegans GN=tni-1 PE=2 SV=1
Length = 250
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 121/203 (59%), Gaps = 17/203 (8%)
Query: 7 AAAETPAEAAAASAEDEAKRLKLEELERKRAEVRRRMEEASGARRKKGFMTPERKKKLRL 66
AA ET E A A+ E E K+AEVR+R+EEA ++KKGF+TPERKKKLR
Sbjct: 13 AANETDGEDAQRKAQ---------EREAKKAEVRKRLEEAGQKKQKKGFLTPERKKKLRK 63
Query: 67 LLRKKAAEELKREQERRALERKRVIDERCG---EPKDTDDMAEDEIGDLCQEYWQRIYNL 123
LL KAAE+LK +Q R+ ER +V+ ER DD A+ E + + + R+ NL
Sbjct: 64 LLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEA--IYNDLFSRLCNL 121
Query: 124 EAIKYELDREIMLKDFEITELGKQVNDLRGKFVRPILKKVSKYENKFAKL---QKKAAEF 180
E KY+++ + I +L +VNDLRGKFV+P LKKVSKY+NKF K+ +K+
Sbjct: 122 EEEKYDINHITTETETTINQLNIEVNDLRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSK 181
Query: 181 NFRSQLKAVKKREFSMEDAEKEK 203
N R+ LK VKK + A K+K
Sbjct: 182 NLRNNLKTVKKESVFTQIANKKK 204
>sp|Q9GYF1|TNNI2_CAEEL Troponin I 2 OS=Caenorhabditis elegans GN=unc-27 PE=2 SV=2
Length = 242
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 119/187 (63%), Gaps = 10/187 (5%)
Query: 31 ELERKRAEVRRRMEEA-SGARRKKGFMTPERKKKLRLLLRKKAAEELKREQERRALERKR 89
E E K+AEVR+R+EEA + + KKGF+TPERKKKLR LL KAAE+LKR+Q + ER++
Sbjct: 15 EREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQK 74
Query: 90 VIDERCGEPKDTDDMAEDEIGDLCQEY---WQRIYNLEAIKYELDREIMLKDFEITELGK 146
+ +R + D + D+ G L + Y W R+ LE KY+++ + + EI L
Sbjct: 75 ALADRTISLPNVDSI--DDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTI 132
Query: 147 QVNDLRGKFVRPILKKVSKYENKFAKL--QKKAAEFNFRSQLKAVKK--REFSMEDAEKE 202
+VNDLRGKFV+P LKKVSKY+NKF K K + +FR+ LK VKK E + +K+
Sbjct: 133 EVNDLRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKKDVMEAIVNVKKKD 192
Query: 203 KKPEWVK 209
KP+W K
Sbjct: 193 DKPDWSK 199
>sp|Q9XUN9|TNNI3_CAEEL Troponin I 3 OS=Caenorhabditis elegans GN=tni-3 PE=2 SV=1
Length = 260
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 124/203 (61%), Gaps = 12/203 (5%)
Query: 16 AAASAEDEAKRLKLEELERKRAEVRRRMEEASGARRKKG-FMTPERKKKLRLLLRKKAAE 74
A A ED+A R K +E E K+AEVR+RMEEA+ KK F+TPERKKKLR LL KAAE
Sbjct: 13 AQADVEDDAAR-KAQERELKKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAE 71
Query: 75 ELKREQERRALERKRVIDERCGEPKDTDDMAEDEIGDLCQEY---WQRIYNLEAIKYELD 131
+LK++Q + ER++ + +R D D + + G L + Y + R+ LE K++++
Sbjct: 72 DLKQQQMLKEQERQKTLQQRTIPLPDVDSINDQ--GQLLKIYEDMFARVCALEEEKFDIN 129
Query: 132 REIMLKDFEITELGKQVNDLRGKFVRPILKKVSKYENKFAKLQKKAAEFNFRSQLKAVKK 191
+ + EI +L QVNDLRGKFV+P LKKVSKY+NKF + + NFR+ LK VKK
Sbjct: 130 FGVSQTEAEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKK 189
Query: 192 REFSMEDAEKEK-----KPEWVK 209
E K+K KPEW K
Sbjct: 190 ETDLDEIMAKKKGTADGKPEWSK 212
>sp|Q7M3Y3|TNNI_CHLNI Troponin I OS=Chlamys nipponensis akazara PE=1 SV=2
Length = 292
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 112 LCQEYWQRIYNLEAIKYELDREIMLKDFEITELGKQVNDLRGKFVRPILKKVSKYENKFA 171
LC+++ +R+ +LE Y+ + +I +DFEI EL +VND +GKFV+P+L+KV+K E+K
Sbjct: 199 LCKDFHKRLASLEEDVYDWEAKIRKQDFEINELTLKVNDTKGKFVKPVLRKVNKTESKLD 258
Query: 172 KLQKK-AAEFNFRSQLKAVKKRE 193
K+Q+K A + +FR LK+ ++ E
Sbjct: 259 KIQRKEAKKSDFRDNLKSSREHE 281
>sp|P48787|TNNI3_MOUSE Troponin I, cardiac muscle OS=Mus musculus GN=Tnni3 PE=1 SV=2
Length = 211
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 97/168 (57%), Gaps = 11/168 (6%)
Query: 51 RKKGFMTPERKKKLRLLLRKKAAEELKREQERRALERKRVIDERCGEPKDTDDMAEDEIG 110
+KK ++ RK +L+ L+ + A +E++RE E R E+ RV+ RC +P + D + +E+
Sbjct: 37 KKKSKISASRKLQLKTLMLQIAKQEMEREAEERRGEKGRVLRTRC-QPLELDGLGFEELQ 95
Query: 111 DLCQEYWQRIYNLEAIKYELDREIMLKDFEITELGKQVNDLRGKFVRPILKKVSKYENKF 170
DLC++ R+ ++ +Y+++ ++ EI +L +++ DLRGKF RP L++V +
Sbjct: 96 DLCRQLHARVDKVDEERYDVEAKVTKNITEIADLTQKIYDLRGKFKRPTLRRVRISADAM 155
Query: 171 --AKLQKKAAE-FNFRSQLKAVKKREFSMEDAEKEKKP--EWVKEPES 213
A L +A E + R+ LK VKK ED EKE + +W K ++
Sbjct: 156 MQALLGTRAKESLDLRAHLKQVKK-----EDIEKENREVGDWRKNIDA 198
>sp|P23693|TNNI3_RAT Troponin I, cardiac muscle OS=Rattus norvegicus GN=Tnni3 PE=1 SV=2
Length = 211
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 11/168 (6%)
Query: 51 RKKGFMTPERKKKLRLLLRKKAAEELKREQERRALERKRVIDERCGEPKDTDDMAEDEIG 110
+KK ++ RK +L+ L+ + A +E++RE E R E+ RV+ RC +P D + +E+
Sbjct: 37 KKKSKISASRKLQLKTLMLQIAKQEMEREAEERRGEKGRVLSTRC-QPLVLDGLGFEELQ 95
Query: 111 DLCQEYWQRIYNLEAIKYELDREIMLKDFEITELGKQVNDLRGKFVRPILKKVSKYENKF 170
DLC++ R+ ++ +Y+++ ++ EI +L +++ DLRGKF RP L++V +
Sbjct: 96 DLCRQLHARVDKVDEERYDVEAKVTKNITEIADLTQKIYDLRGKFKRPTLRRVRISADAM 155
Query: 171 --AKLQKKAAE-FNFRSQLKAVKKREFSMEDAEKEKKP--EWVKEPES 213
A L +A E + R+ LK VKK ED EKE + +W K ++
Sbjct: 156 MQALLGTRAKESLDLRAHLKQVKK-----EDIEKENREVGDWRKNIDA 198
>sp|P08057|TNNI3_BOVIN Troponin I, cardiac muscle OS=Bos taurus GN=TNNI3 PE=1 SV=2
Length = 212
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 51 RKKGFMTPERKKKLRLLLRKKAAEELKREQERRALERKRVIDERCGEPKDTDDMAEDEIG 110
+KK ++ RK +L+ L+ + A +EL+RE E R E+ R + RC +P + + E+
Sbjct: 38 KKKSKISASRKLQLKTLMLQIAKQELEREAEERRGEKGRALSTRC-QPLELAGLGFAELQ 96
Query: 111 DLCQEYWQRIYNLEAIKYELDREIMLKDFEITELGKQVNDLRGKFVRPILKKVSKYENKF 170
DLC++ R+ ++ +Y+++ ++ EI +L +++ DLRGKF RP L++V +
Sbjct: 97 DLCRQLHARVDKVDEERYDVEAKVTKNITEIADLNQKIFDLRGKFKRPTLRRVRISADAM 156
Query: 171 --AKLQKKAAE-FNFRSQLKAVKKREFSMEDAEKEKK--PEWVKEPES 213
A L +A E + R+ LK VKK ED EKE + +W K ++
Sbjct: 157 MQALLGARAKETLDLRAHLKQVKK-----EDTEKENREVGDWRKNIDA 199
>sp|P19246|NFH_MOUSE Neurofilament heavy polypeptide OS=Mus musculus GN=Nefh PE=1 SV=3
Length = 1090
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 346 EGEAPADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPAAEGAPAP 405
E ++PA+ PAE PAE PAE PAE PAE PA P E +E
Sbjct: 598 EAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAEAKSPATVKSPGEAKSPSEAKS-- 655
Query: 406 PAEGPPPAEGAPPAEAPPPAEGAPAAEGAPAPAEGAPAPPAEGAPRAEGAPPAE 459
PAE PAE PAEA PAE E A +PAE P PAE AE PAE
Sbjct: 656 PAEAKSPAEAKSPAEAKSPAEVKSPGE-AKSPAE--PKSPAEAKSPAEVKSPAE 706
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 346 EGEAPADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEG-APAAEGAPA 404
E ++PA+ P E PAE PAE PAE PAE PAE P E +PAA +PA
Sbjct: 670 EAKSPAEVKSPGEAKSPAEPKSPAEAKSPAEVKSPAEAKSPAEVKSPGEAKSPAAVKSPA 729
Query: 405 ---------PPAEGPPPAEGAPPAEAPPPAEG-------------APAAEGAPAPAEGAP 442
P E P E PAEA PAE P EGA +PAE
Sbjct: 730 EAKSPAAVKSPGEAKSPGEAKSPAEAKSPAEAKSPIEVKSPEKAKTPVKEGAKSPAEAKS 789
Query: 443 APPAEGAPRAEGAPPAEGAPAPPAEGAPAPPAEGAPAPPADAPPAEPAPPAEAPPAESA 501
A+ + + PPAE A +P E A +P EGA P P +P A+ P E A
Sbjct: 790 PEKAKSPVKEDIKPPAE-AKSP--EKAKSPVKEGAKPPEKAKPLDVKSPEAQTPVQEEA 845
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 341 GEPKPEGEA--PADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAE-GAP 397
GE K GEA PA+ P E P E P E PAE PAE PAE PAE +P
Sbjct: 525 GEAKSPGEAKSPAEAKSPGEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKSPAEPKSP 584
Query: 398 AAEGAPA---------PPAEGPPPAEGAPPAEAPPPAEGAPAAEGAPAPAEG-APA---P 444
A +P PAE PAE PAEA PAE AE A +PAE +PA
Sbjct: 585 ATVKSPGEAKSPSEAKSPAEAKSPAEAKSPAEAKSPAEAKSPAE-AKSPAEAKSPATVKS 643
Query: 445 PAEGAPRAEGAPPAEGAPAPPAEGAPA---PPAEGAPAPPADAPPAEPAPPAEA 495
P E +E PAE A +P +PA PAE +P PAEP PAEA
Sbjct: 644 PGEAKSPSEAKSPAE-AKSPAEAKSPAEAKSPAE-VKSPGEAKSPAEPKSPAEA 695
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 344 KPEGEAPADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAE-GAPAAEGA 402
K E ++P + P E PAE P E P E P E PAE PAE +PA +
Sbjct: 518 KEEAKSPGEAKSPGEAKSPAEAKSPGEAKSPGEAKSPGEAKSPAEPKSPAEPKSPAEAKS 577
Query: 403 PAPPAEGPPPAEGAPPAEAPPPAEGAPAAEGAPAPAEGAPAPPAEGAPRAEGAPPAEGAP 462
PA P PA P EA P+E AE A +PAE PAE AE PAE A
Sbjct: 578 PAEP---KSPATVKSPGEAKSPSEAKSPAE-AKSPAEA--KSPAEAKSPAEAKSPAE-AK 630
Query: 463 APPAEGAPA---PPAEGAPAPPADAPPAEPAPPAEA 495
+P +PA P E A +P PAE PAEA
Sbjct: 631 SPAEAKSPATVKSPGE-AKSPSEAKSPAEAKSPAEA 665
>sp|P16884|NFH_RAT Neurofilament heavy polypeptide OS=Rattus norvegicus GN=Nefh PE=1
SV=4
Length = 1072
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 346 EGEAPADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPAAEGAPAP 405
E ++PA PAE P PAE PAE PPAE PAE PAE
Sbjct: 693 EAKSPAGAKSPAEAKSPVVAKSPAEAKSPAEAKPPAEAKSPAEAKSPAEAKS-------- 744
Query: 406 PAEGPPPAEGAPPAEAPPPAEG-APAAEGAPAPAEGAPAPPAEGAPRAEGAPPAE 459
PAE PAE P E P + +P EGA + AE A+ + E PPAE
Sbjct: 745 PAEAKSPAEAKSPVEVKSPEKAKSPVKEGAKSLAEAKSPEKAKSPVKEEIKPPAE 799
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 346 EGEAPADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEG-APAAEGAPA 404
E ++PA+ PAE PAE PAE PAE PAE PAE PAE +PA +PA
Sbjct: 531 EAKSPAEVKSPAEVKSPAEAKSPAEAKSPAEVKSPAEVKSPAEAKSPAEAKSPAEVKSPA 590
Query: 405 P---PAEGPPPAEGAPPAEAPPPAEG-APAAEGAPAPAE--GAPAPPAEGAPRAEGAPPA 458
P E PAE PAE P E +PA +PA + G PAE AE PA
Sbjct: 591 TVKSPGEAKSPAEAKSPAEVKSPVEAKSPAEAKSPASVKSPGEAKSPAEAKSPAEVKSPA 650
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 346 EGEAPADGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAE-GAPAAEGAPA 404
E ++PA+ PAE P E PAE PA P E PAE PAE +PA +P
Sbjct: 597 EAKSPAEAKSPAEVKSPVEAKSPAEAKSPASVKSPGEAKSPAEAKSPAEVKSPATVKSPV 656
Query: 405 PPAEGPPPAEGAPPAEAPPPAEG-------APAAEGAPAPAE---GAPAPPAEGAPRAEG 454
E PAE P PAE +PA+ +P+ A+ GA +P +P
Sbjct: 657 ---EAKSPAEVKSPVTVKSPAEAKSPVEVKSPASVKSPSEAKSPAGAKSPAEAKSPVVAK 713
Query: 455 APPAEGAPA---PPAEGAPAPPAEGAPAPPADAPPAEPAPPAEA 495
+P +PA PPAE PAE A +P PAE PAEA
Sbjct: 714 SPAEAKSPAEAKPPAEA--KSPAE-AKSPAEAKSPAEAKSPAEA 754
>sp|P06914|CSP_PLAYO Circumsporozoite protein OS=Plasmodium yoelii yoelii PE=1 SV=1
Length = 367
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 377 GAPPAEGAPPAEGAPPAEGAPAAEGAPAPPAEGPPPAEGAPPAEAPPPAEGAPAAEGAPA 436
GAP GAP GAP GAP GAP P G P GAP P GAP GAP
Sbjct: 142 GAPQGPGAPQGPGAPQGPGAPQGPGAPQGP--GAPQGPGAPQGPGAPQGPGAPQGPGAP- 198
Query: 437 PAEGAPAPPAEGAPRAEGAPPAEGAPAPPA 466
+G AP GAP+ GAP GAP P
Sbjct: 199 --QGPGAPQGPGAPQGPGAPQGPGAPQGPG 226
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 28/55 (50%)
Query: 353 GAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPAAEGAPAPPA 407
GAP GAP GAP GAP GAP GAP GAP GAP GAP P
Sbjct: 172 GAPQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQGPG 226
>sp|P15941|MUC1_HUMAN Mucin-1 OS=Homo sapiens GN=MUC1 PE=1 SV=3
Length = 1255
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 147 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 206
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 207 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 266
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 267 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 326
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 327 APGSTAPPAH 336
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 187 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 246
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 247 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 306
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 307 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 366
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 367 APGSTAPPAH 376
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 227 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 286
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 287 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 346
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 347 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 406
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 407 APGSTAPPAH 416
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 267 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 326
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 327 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 386
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 387 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 446
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 447 APGSTAPPAH 456
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 307 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 366
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 367 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 426
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 427 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 486
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 487 APGSTAPPAH 496
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 347 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 406
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 407 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 466
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 467 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 526
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 527 APGSTAPPAH 536
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 387 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 446
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 447 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 506
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 507 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 566
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 567 APGSTAPPAH 576
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 427 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 486
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 487 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 546
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 547 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 606
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 607 APGSTAPPAH 616
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 467 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 526
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 527 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 586
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 587 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 646
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 647 APGSTAPPAH 656
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 507 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 566
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 567 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 626
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 627 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 686
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 687 APGSTAPPAH 696
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 547 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 606
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 607 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 666
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 667 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 726
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 727 APGSTAPPAH 736
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 587 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 646
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 647 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 706
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 707 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 766
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 767 APGSTAPPAH 776
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 627 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 686
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 687 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 746
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 747 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 806
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 807 APGSTAPPAH 816
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 667 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 726
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 727 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 786
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 787 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 846
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 847 APGSTAPPAH 856
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 707 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 766
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 767 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 826
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 827 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 886
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 887 APGSTAPPAH 896
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 747 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 806
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
G+ APPA G P P APPA P P AP A G + P
Sbjct: 807 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 866
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 867 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 926
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 927 APGSTAPPAH 936
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 86/190 (45%), Gaps = 34/190 (17%)
Query: 335 HEETEGGEPKPEGEAPADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--A 390
H+ T + KP AP APPA G A PA G APPA G A PA G A
Sbjct: 116 HDVTSAPDNKP---APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTA 172
Query: 391 PPAEGAPAAEGAPAPPAEGPPPAEGAPPAEA--------PPPAEGAPAAEGAPA-----P 437
PPA G +A P P P APPA P P AP A G + P
Sbjct: 173 PPAHGVTSA------PDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 226
Query: 438 AEGAPAPPAEGAPRAEGAPPAEGAPAPPAEG-APAP---PAEGAPAPPA----DAPPAEP 489
A G+ APPA G A PA G+ APPA G AP PA G+ APPA AP P
Sbjct: 227 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 286
Query: 490 APPAEAPPAE 499
AP + APPA
Sbjct: 287 APGSTAPPAH 296
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 349 APADGAPPAEGAPPAEGAPPAEG--APPAEGAPPAEGAPPAEG--APPAEGAPAAE---- 400
AP APPA G A PA G APPA G A PA G APPA G +A
Sbjct: 807 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP 866
Query: 401 --GAPAPPAEG--------PPPAEGAPPAEAPPPAEGAPAAEGAPAPAEGAPAPPAEGAP 450
G+ APPA G P P APPA AP PA G+ APPA G
Sbjct: 867 APGSTAPPAHGVTSAPDTRPAPGSTAPPAHG---VTSAPDTR----PAPGSTAPPAHGVT 919
Query: 451 RAEGAPPAEGAPAPPAEG 468
A PA G+ APPA G
Sbjct: 920 SAPDTRPAPGSTAPPAHG 937
>sp|Q8CQD9|PLS_STAES Accumulation-associated protein OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=SE_0175 PE=4 SV=1
Length = 1469
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 369 AEGAPPAEGAPPAEGAPPAEGAPPAE-GAPAAEGAPAPPAEGPPPAEGAPPAEAPPPAE- 426
AE PAE PAE PAE PAE G PA G PA P + PAE PAE PAE
Sbjct: 1297 AEPGKPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGK---PAEPGKPAEPGKPAEP 1353
Query: 427 GAPAAEGAPAPAEGAPAPPAE-GAPRAEGAPPAEGAPAPPAEGAPAPPAEGAPAPPADAP 485
G PA G PA P PAE G P G P G PA P G PA P G PA P
Sbjct: 1354 GKPAEPGTPA----EPGKPAEPGKPAEPGKPAEPGTPAEP--GKPAEP--GTPAEPGK-- 1403
Query: 486 PAEPAPPAEA 495
PAEP P ++
Sbjct: 1404 PAEPGTPTQS 1413
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 356 PAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPPAEGAPAAEGAPAPPAEGPPPAEG 415
PAE PAE PAE PAE PAE PAE PAE P PAE PAE
Sbjct: 1302 PAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGKPAE--------PGKPAEPGKPAEP 1353
Query: 416 APPAEAPPPAE-GAPAAEGAPA----PAEGAPAPPAE-GAPRAEGAPPAEGAPAPPAEGA 469
PAE PAE G PA G PA PAE P PAE G P G P G PA P
Sbjct: 1354 GKPAEPGTPAEPGKPAEPGKPAEPGKPAE--PGTPAEPGKPAEPGTPAEPGKPAEPG--- 1408
Query: 470 PAPPAEGAPAPP 481
P GAP P
Sbjct: 1409 -TPTQSGAPEQP 1419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.128 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,999,364
Number of Sequences: 539616
Number of extensions: 14372576
Number of successful extensions: 412192
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 5275
Number of HSP's that attempted gapping in prelim test: 91470
Number of HSP's gapped (non-prelim): 101198
length of query: 503
length of database: 191,569,459
effective HSP length: 122
effective length of query: 381
effective length of database: 125,736,307
effective search space: 47905532967
effective search space used: 47905532967
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 63 (28.9 bits)