Query psy9562
Match_columns 267
No_of_seqs 122 out of 386
Neff 4.1
Searched_HMMs 46136
Date Fri Aug 16 22:48:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1903|consensus 100.0 1.2E-83 2.7E-88 558.0 17.7 216 4-259 2-217 (217)
2 KOG0440|consensus 100.0 8.5E-73 1.9E-77 507.0 18.5 207 10-259 33-240 (243)
3 PF03637 Mob1_phocein: Mob1/ph 100.0 3.2E-68 7E-73 460.7 17.4 175 34-251 1-175 (175)
4 KOG1852|consensus 100.0 4E-29 8.7E-34 217.7 8.6 183 20-250 26-210 (223)
5 KOG0440|consensus 99.5 8.5E-15 1.8E-19 132.9 -0.2 142 46-244 55-218 (243)
6 KOG1903|consensus 99.2 6E-12 1.3E-16 110.6 1.4 142 39-241 25-192 (217)
7 PF03637 Mob1_phocein: Mob1/ph 99.0 6.1E-11 1.3E-15 103.4 -1.7 134 52-242 7-159 (175)
8 PRK00811 spermidine synthase; 35.9 61 0.0013 30.0 4.6 90 96-212 130-219 (283)
9 PF04417 DUF501: Protein of un 26.1 1.5E+02 0.0033 25.3 5.0 75 178-252 16-91 (139)
10 PF08096 Bombolitin: Bomboliti 17.3 1.1E+02 0.0023 17.8 1.6 15 194-208 3-17 (17)
No 1
>KOG1903|consensus
Probab=100.00 E-value=1.2e-83 Score=558.02 Aligned_cols=216 Identities=72% Similarity=1.302 Sum_probs=209.9
Q ss_pred cchhhHhhhcCCCccCcCCCCCCCCcchhhhHHHHhhhccccchhhhccCCCCCCchhHHHhcHHHHHHHHHHHHhhhcc
Q psy9562 4 NLSGFVEFFQKGKTFRPKKKFNPGTMRYSLHKQAQASLSSGINLRSVVQLPEGEDMNDWIAVHVVDFFNRINLIYGTVSE 83 (267)
Q Consensus 4 ~~~~~~~~~~~~~t~~p~k~~~~~~~~~~l~~~~~a~l~~~~~l~~~V~lP~G~D~neWiA~h~~dffneinll~~~vse 83 (267)
.+.++..+|+|+|||||||+|++||.||+||+++||+|.+|+||+.+|+||+|+|+|+|+|+|++||||+|||+||+++|
T Consensus 2 a~~~~~q~fnK~KTFRPkkkF~~GT~Rf~LhK~AqAsL~sG~dLr~aV~LPpgEn~nDW~AVHvVDFFNRiNLiYGTise 81 (217)
T KOG1903|consen 2 ASLCLKQVFNKDKTFRPKKKFEPGTQRFELHKKAQASLNSGLDLRSAVRLPPGENLNDWLAVHVVDFFNRINLIYGTISE 81 (217)
T ss_pred ccHHHHHHHccCCccCCCCCCCCCceeeehHHHHHHHHhcCcchHHhccCCCCCCccceeeeehhhhhhhhHhhhhhHhh
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCceeeeeccccccccCCCCCcccCCcchhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHH
Q psy9562 84 FCTEESCPTMSGGPRINLIYGTVSEFCTEESCPTMSGGPRYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIAL 163 (267)
Q Consensus 84 fCT~~tCP~m~~~~~~~~~~~~~~e~Ct~~~~p~Msag~~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~ 163 (267)
+||++||| +|+|||+|+ |+|+|+.+|++|+.+|||+||++
T Consensus 82 ~Cte~sCP-------------------------~MsGG~rYE---------------Y~WqD~~~ykkPt~L~Ap~Ym~l 121 (217)
T KOG1903|consen 82 FCTETSCP-------------------------VMSGGPRYE---------------YRWQDERKYKKPTALSAPRYMAL 121 (217)
T ss_pred hccccCCC-------------------------cccCCCcce---------------eEecccccccCCccCCcHHHHHH
Confidence 99999999 777788888 99999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCCC
Q psy9562 164 LMDWIEGQINDENLFPVSTDIPFPKTFVNLCRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLVN 243 (267)
Q Consensus 164 l~~w~~~~l~De~iFPt~~~~~FP~~F~~~~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li~ 243 (267)
+||||+.+||||.+||+..|+||||+|.+.|++|+.||||||.|||+|||+++.++|+|+|+|||||||++|++||+|||
T Consensus 122 LMDWIE~~INnE~vFPt~~~vpFPKnF~qi~~KILtRLFRVFVHVYIHHFDri~~mGaE~HvNtcYKHFYyFv~Ef~li~ 201 (217)
T KOG1903|consen 122 LMDWIEVQINNEEVFPTSVGVPFPKNFLQICKKILTRLFRVFVHVYIHHFDRILSMGAEAHVNTCYKHFYYFVTEFGLID 201 (217)
T ss_pred HHHHHHHhccccccccccCCCCCcHhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHhccHHHHHHHHHHHHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHhh
Q psy9562 244 VKELEPLREMTAQICR 259 (267)
Q Consensus 244 ~kel~Pl~~l~~~~~~ 259 (267)
.||||||+||+++||.
T Consensus 202 ~kELEpLkeMT~R~c~ 217 (217)
T KOG1903|consen 202 TKELEPLKEMTERICH 217 (217)
T ss_pred hhhcchHHHHHHHhcC
Confidence 9999999999999984
No 2
>KOG0440|consensus
Probab=100.00 E-value=8.5e-73 Score=507.02 Aligned_cols=207 Identities=50% Similarity=0.936 Sum_probs=199.0
Q ss_pred hhhcCCCccCcCCCCCCCCcchhhhHHHHhhhcc-ccchhhhccCCCCCCchhHHHhcHHHHHHHHHHHHhhhcccccCC
Q psy9562 10 EFFQKGKTFRPKKKFNPGTMRYSLHKQAQASLSS-GINLRSVVQLPEGEDMNDWIAVHVVDFFNRINLIYGTVSEFCTEE 88 (267)
Q Consensus 10 ~~~~~~~t~~p~k~~~~~~~~~~l~~~~~a~l~~-~~~l~~~V~lP~G~D~neWiA~h~~dffneinll~~~vsefCT~~ 88 (267)
..-...+++++|+...+++.++++.+.+.++|++ | ||+++|+||+|+|+|||||+|+++|||+||++||+++||||++
T Consensus 33 ~~~~~~~~~~~k~~~~~~s~~~~~~~~~e~~l~s~g-~l~~aV~LP~G~D~nEWlA~nt~~fF~qvN~lYGtitEfCT~~ 111 (243)
T KOG0440|consen 33 AVASAAKPFRKKEASASLSVRPQAKYLAEATLGSSG-NLREAVKLPEGEDLNEWLAVNTLDFFNQVNLLYGTITEFCTQQ 111 (243)
T ss_pred cceeccccccccccCcccCccHHHHHHHHHhhcccc-cHHHHhcCCCCCchhhHHHHhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3334578899999999999999999999999999 7 9999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeeeeccccccccCCCCCcccCCcchhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHH
Q psy9562 89 SCPTMSGGPRINLIYGTVSEFCTEESCPTMSGGPRYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWI 168 (267)
Q Consensus 89 tCP~m~~~~~~~~~~~~~~e~Ct~~~~p~Msag~~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~ 168 (267)
+|| +|+|||+|+ |+|+|+. +||+.+||||||+++|+|+
T Consensus 112 sCp-------------------------~Msag~~ye---------------Y~W~D~~--~kp~~~sApqYId~lmtw~ 149 (243)
T KOG0440|consen 112 SCP-------------------------HMSAGPNYE---------------YLWADEK--GKPVRVSAPQYIDYLMTWC 149 (243)
T ss_pred cCc-------------------------cccCCCcce---------------eeeeccc--CCccccCchHHHHHHHHHH
Confidence 999 999999999 9999965 7999999999999999999
Q ss_pred HhhcCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCCCCCCcc
Q psy9562 169 EGQINDENLFPVSTDIPFPKTFVNLCRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLVNVKELE 248 (267)
Q Consensus 169 ~~~l~De~iFPt~~~~~FP~~F~~~~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li~~kel~ 248 (267)
+++++||++||++.|.+||++|...+++|+|||||||||||++||+.|++|++++||||+|+||+.|++||+|||+||++
T Consensus 150 q~~~dde~iFPtK~g~~FP~nF~~~vk~Ilr~lFrvyAHiY~~Hf~~i~~L~l~ahlNt~F~Hf~~f~~eF~LiD~kE~a 229 (243)
T KOG0440|consen 150 QNQLDDENIFPTKYGNPFPGNFESVVKKILRRLFRVYAHIYHSHFDEIVALQLEAHLNTSFKHFILFAREFQLLDKKETA 229 (243)
T ss_pred HHhccccccCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHhh
Q psy9562 249 PLREMTAQICR 259 (267)
Q Consensus 249 Pl~~l~~~~~~ 259 (267)
||+|||+.+..
T Consensus 230 Pl~~Li~~l~~ 240 (243)
T KOG0440|consen 230 PLLELIESLLS 240 (243)
T ss_pred hHHHHHHHHhc
Confidence 99999999865
No 3
>PF03637 Mob1_phocein: Mob1/phocein family; InterPro: IPR005301 Mob1 is an essential Saccharomyces cerevisiae (Baker's yeast) protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation. Mob1 contains no known structural motifs; however MOB1 is a member of a conserved gene family and shares sequence similarity with a nonessential yeast gene, MOB2. Mob1 is a phosphoprotein in vivo and a substrate for the Mps1p kinase in vitro. Conditional alleles of MOB1 cause a late nuclear division arrest at restrictive temperature []. This family also includes phocein Q9QYW3 from SWISSPROT, a rat protein that by yeast two hybrid interacts with striatin [].; PDB: 2HJN_A 1PI1_A 1R3B_A.
Probab=100.00 E-value=3.2e-68 Score=460.70 Aligned_cols=175 Identities=59% Similarity=1.139 Sum_probs=158.4
Q ss_pred hHHHHhhhccccchhhhccCCCCCCchhHHHhcHHHHHHHHHHHHhhhcccccCCCCCCCCCCCceeeeeccccccccCC
Q psy9562 34 HKQAQASLSSGINLRSVVQLPEGEDMNDWIAVHVVDFFNRINLIYGTVSEFCTEESCPTMSGGPRINLIYGTVSEFCTEE 113 (267)
Q Consensus 34 ~~~~~a~l~~~~~l~~~V~lP~G~D~neWiA~h~~dffneinll~~~vsefCT~~tCP~m~~~~~~~~~~~~~~e~Ct~~ 113 (267)
|++++++|++| |++++|+||+|+|+|||||+|++||||++|++||+|+|+||++|||
T Consensus 1 ~~~~~~~l~~~-~l~~~V~lP~g~d~~eWla~~~~~f~~~in~l~~~v~e~Ct~~tCP---------------------- 57 (175)
T PF03637_consen 1 QQYVQATLGKG-NLRTLVKLPKGVDENEWLAVHTVDFFNEINLLYGVVSEFCTPETCP---------------------- 57 (175)
T ss_dssp HHHHHHHCCGG--HHHHCS-STT--HHHHHHHHHHHHHHHHHHHHHHHGGGS-TTTTS----------------------
T ss_pred CHHHHHHHhcC-CHHHHhcCcCCCChhhHHHHhhHHHHHHHHHHHhhccCcCCcccCc----------------------
Confidence 68899999999 9999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCcchhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCcchHHH
Q psy9562 114 SCPTMSGGPRYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWIEGQINDENLFPVSTDIPFPKTFVNL 193 (267)
Q Consensus 114 ~~p~Msag~~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~~~~l~De~iFPt~~~~~FP~~F~~~ 193 (267)
+|+||++|+ |+|+|++ ++|++||||+||+++|+|++++|+|+++||++.+++||++|.+.
T Consensus 58 ---~Msag~~~~---------------Ylw~d~~--~kp~~~~A~~Yi~~~l~w~~~~l~d~~iFPt~~~~~fp~~f~~~ 117 (175)
T PF03637_consen 58 ---TMSAGPNWE---------------YLWADHK--KKPVKCSAPQYIDHLLDWIQSQLNDEKIFPTKPGVPFPKNFKKT 117 (175)
T ss_dssp ---SEESSTTCE---------------E-BSSST--TS-BS--HHHHHHHHHHHHHHHHTSTTTSSSSTTS-TTTTHHHH
T ss_pred ---CccCCccce---------------eeeeccC--CCCcccCHHHHHHHHHHHHHHHccCcccCCCccccchhHHHHHH
Confidence 999999998 9999975 68999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCCCCCCccchH
Q psy9562 194 CRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLVNVKELEPLR 251 (267)
Q Consensus 194 ~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li~~kel~Pl~ 251 (267)
|++|+|||||||||||+|||+.|.++|+++|||+||+||++|++||+||++||++||+
T Consensus 118 v~~I~rrLfRvyaHiY~~H~~~~~~l~~~~hln~~F~hF~~f~~eF~Li~~~el~pL~ 175 (175)
T PF03637_consen 118 VKKIFRRLFRVYAHIYHHHFEQFVELELEAHLNTCFKHFVLFAREFDLIDEKELEPLQ 175 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHTT-HHHHHHHHHHHHHHHHHHT-S-GGGGGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhCCCCHHHhcccC
Confidence 9999999999999999999999999999999999999999999999999999999996
No 4
>KOG1852|consensus
Probab=99.96 E-value=4e-29 Score=217.66 Aligned_cols=183 Identities=22% Similarity=0.443 Sum_probs=169.5
Q ss_pred cCCCCCCCCcchhhhHHHHhhhccc-cchhhhccCCCCCCchhHHHhcHHHHHHHHHHHHhhhcccccCCCCCCCCCCCc
Q psy9562 20 PKKKFNPGTMRYSLHKQAQASLSSG-INLRSVVQLPEGEDMNDWIAVHVVDFFNRINLIYGTVSEFCTEESCPTMSGGPR 98 (267)
Q Consensus 20 p~k~~~~~~~~~~l~~~~~a~l~~~-~~l~~~V~lP~G~D~neWiA~h~~dffneinll~~~vsefCT~~tCP~m~~~~~ 98 (267)
|...|++..+...++|++|+.+..+ .|+..+..+|+|.|++.|-++|+++|.-++|-+.-.++..|.++||.
T Consensus 26 pde~feemdstlavqqyiqq~ikadpsnv~~iltppe~qdegvwkyehlrqfc~elnglav~lq~ec~p~tct------- 98 (223)
T KOG1852|consen 26 PDESFEEMDSTLAVQQYIQQNIKADPSNVDKILTPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCT------- 98 (223)
T ss_pred CcchHHHHHhHHHHHHHHHHHhccCchhHHHhcCCCcccccchhhHHHHHHHHHHhhhHHHHHhcccCchHhh-------
Confidence 5566778888889999999999886 79999999999999999999999999999999988899999999998
Q ss_pred eeeeeccccccccCCCCCcccCCcchhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHHHhhcCCCCCC
Q psy9562 99 INLIYGTVSEFCTEESCPTMSGGPRYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWIEGQINDENLF 178 (267)
Q Consensus 99 ~~~~~~~~~e~Ct~~~~p~Msag~~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~~~~l~De~iF 178 (267)
.|.|+.+|. |||+.+ |.|.+|||++|..+.+|-...+||+.+.|
T Consensus 99 ------------------qmtateqwi---------------flcaah---ktpkecpaidytrhtldgaacllnsnkyf 142 (223)
T KOG1852|consen 99 ------------------QMTATEQWI---------------FLCAAH---KTPKECPAIDYTRHTLDGAACLLNSNKYF 142 (223)
T ss_pred ------------------hhhhHhHHH---------------hhhhhc---CCcccCCcccchhhccccccccccCCccC
Confidence 999999988 999999 68999999999999999999999999999
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCCCCCCc-cch
Q psy9562 179 PVSTDIPFPKTFVNLCRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLVNVKEL-EPL 250 (267)
Q Consensus 179 Pt~~~~~FP~~F~~~~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li~~kel-~Pl 250 (267)
|++..+. ...+...-+++||+||||+|.|+||...|..++.|+||. ++|..|+..|+|++.+.| .|+
T Consensus 143 psrvsik--essv~klgsvcrrvyrifsha~fhhr~ifdefe~etylc---~rft~~v~kynlms~e~livpi 210 (223)
T KOG1852|consen 143 PSRVSIK--ESSVAKLGSVCRRVYRIFSHAYFHHRKIFDEFENETYLC---HRFTKFVSKYNLMSKENLIVPI 210 (223)
T ss_pred Ccccchh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH---HHHHHHHHhhhhccccceeeec
Confidence 9998875 778999999999999999999999999999999999993 689999999999999886 554
No 5
>KOG0440|consensus
Probab=99.45 E-value=8.5e-15 Score=132.86 Aligned_cols=142 Identities=20% Similarity=0.419 Sum_probs=113.9
Q ss_pred chhhhcc--CCC-CCCchhHHHhcHHHHHHHHHHHHhhhcccccCCCCCCCCCCCceeeeeccccccccCCCCCcccCCc
Q psy9562 46 NLRSVVQ--LPE-GEDMNDWIAVHVVDFFNRINLIYGTVSEFCTEESCPTMSGGPRINLIYGTVSEFCTEESCPTMSGGP 122 (267)
Q Consensus 46 ~l~~~V~--lP~-G~D~neWiA~h~~dffneinll~~~vsefCT~~tCP~m~~~~~~~~~~~~~~e~Ct~~~~p~Msag~ 122 (267)
.++.+++ |-. | ++++-+..+-++..||| ++.+++ +| +++||++||+++||||++
T Consensus 55 ~~~~~~e~~l~s~g-~l~~aV~LP~G~D~nEW-lA~nt~-~f-----------F~qvN~lYGtitEfCT~~--------- 111 (243)
T KOG0440|consen 55 QAKYLAEATLGSSG-NLREAVKLPEGEDLNEW-LAVNTL-DF-----------FNQVNLLYGTITEFCTQQ--------- 111 (243)
T ss_pred HHHHHHHHhhcccc-cHHHHhcCCCCCchhhH-HHHhHH-HH-----------HHHHHHHHHHHHHHcCcc---------
Confidence 4444443 334 6 99999999999999999 999999 87 799999999999999997
Q ss_pred chhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHHHhhcCCCCCCCC---------------CCCCCCC
Q psy9562 123 RYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWIEGQINDENLFPV---------------STDIPFP 187 (267)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~~~~l~De~iFPt---------------~~~~~FP 187 (267)
.||+|..+|.| +| .|.++. ..+...|. +++..||
T Consensus 112 ---------------------------sCp~Msag~~y-eY--~W~D~~-~kp~~~sApqYId~lmtw~q~~~dde~iFP 160 (243)
T KOG0440|consen 112 ---------------------------SCPHMSAGPNY-EY--LWADEK-GKPVRVSAPQYIDYLMTWCQNQLDDENIFP 160 (243)
T ss_pred ---------------------------cCccccCCCcc-ee--eeeccc-CCccccCchHHHHHHHHHHHHhccccccCc
Confidence 58888888888 66 677632 22222221 6777899
Q ss_pred c----chHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCCCC
Q psy9562 188 K----TFVNLCRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLVNV 244 (267)
Q Consensus 188 ~----~F~~~~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li~~ 244 (267)
. .|+..+..++|+|+|.++|||+|.|.. ++..-.+|+.- +|...+.++|-++-.
T Consensus 161 tK~g~~FP~nF~~~vk~Ilr~lFrvyAHiY~~--Hf~~i~~L~l~-ahlNt~F~Hf~~f~~ 218 (243)
T KOG0440|consen 161 TKYGNPFPGNFESVVKKILRRLFRVYAHIYHS--HFDEIVALQLE-AHLNTSFKHFILFAR 218 (243)
T ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhHH-HHHHHHHHHHHHHHH
Confidence 5 499999999999999999999999966 44455688765 999999999988743
No 6
>KOG1903|consensus
Probab=99.18 E-value=6e-12 Score=110.64 Aligned_cols=142 Identities=25% Similarity=0.445 Sum_probs=111.8
Q ss_pred hhhccccchhhhccCCCCCCchhHHHhcHHHHHHHHHHHHhhhcccccCCCCCCCCCCCceeeeeccccccccCCCCCcc
Q psy9562 39 ASLSSGINLRSVVQLPEGEDMNDWIAVHVVDFFNRINLIYGTVSEFCTEESCPTMSGGPRINLIYGTVSEFCTEESCPTM 118 (267)
Q Consensus 39 a~l~~~~~l~~~V~lP~G~D~neWiA~h~~dffneinll~~~vsefCT~~tCP~m~~~~~~~~~~~~~~e~Ct~~~~p~M 118 (267)
.+++-..--+.-..|-.|+|+..-+..+.++.+|+| +++.+| || ++|||+||||++|+||++
T Consensus 25 GT~Rf~LhK~AqAsL~sG~dLr~aV~LPpgEn~nDW-~AVHvV-DF-----------FNRiNLiYGTise~Cte~----- 86 (217)
T KOG1903|consen 25 GTQRFELHKKAQASLNSGLDLRSAVRLPPGENLNDW-LAVHVV-DF-----------FNRINLIYGTISEFCTET----- 86 (217)
T ss_pred CceeeehHHHHHHHHhcCcchHHhccCCCCCCccce-eeeehh-hh-----------hhhhHhhhhhHhhhcccc-----
Confidence 444433333455678899999999999999999999 999999 88 899999999999999997
Q ss_pred cCCcchhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHHHhhcCCCCCC--CC----------------
Q psy9562 119 SGGPRYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWIEGQINDENLF--PV---------------- 180 (267)
Q Consensus 119 sag~~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~~~~l~De~iF--Pt---------------- 180 (267)
+||+++..|.| +| .|.++. .+ |+
T Consensus 87 -------------------------------sCP~MsGG~rY-EY--~WqD~~-----~ykkPt~L~Ap~Ym~lLMDWIE 127 (217)
T KOG1903|consen 87 -------------------------------SCPVMSGGPRY-EY--RWQDER-----KYKKPTALSAPRYMALLMDWIE 127 (217)
T ss_pred -------------------------------CCCcccCCCcc-ee--Eecccc-----cccCCccCCcHHHHHHHHHHHH
Confidence 69999999999 66 565543 44 55
Q ss_pred ---CCCCCCCcc----hHHHHHHHHHHHHHHHHHHhhhhHHH-HHHhCcchHHHHHHHHHHHHHHhhcC
Q psy9562 181 ---STDIPFPKT----FVNLCRKILTRLFRVFVHVYIHHFDR-IVSIGAEPHVNTCYKHFYYFIREFDL 241 (267)
Q Consensus 181 ---~~~~~FP~~----F~~~~~~i~rrLfRv~aHiY~hHf~~-~~~l~~e~hlNt~fkHF~~F~~eF~L 241 (267)
.++..||.. |++.+..|+|+|.-++++|+.|-|-+ |..+ ..+..- +|-...-++|--
T Consensus 128 ~~INnE~vFPt~~~vpFPKnF~qi~~KILtRLFRVFVHVYIHHFDri---~~mGaE-~HvNtcYKHFYy 192 (217)
T KOG1903|consen 128 VQINNEEVFPTSVGVPFPKNFLQICKKILTRLFRVFVHVYIHHFDRI---LSMGAE-AHVNTCYKHFYY 192 (217)
T ss_pred HhccccccccccCCCCCcHhHHHHHHHHHHHHHHHHhhhhhhhhHHH---HHhccH-HHHHHHHHHHHH
Confidence 445579964 99999999999999999999999844 4443 344433 677777777643
No 7
>PF03637 Mob1_phocein: Mob1/phocein family; InterPro: IPR005301 Mob1 is an essential Saccharomyces cerevisiae (Baker's yeast) protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation. Mob1 contains no known structural motifs; however MOB1 is a member of a conserved gene family and shares sequence similarity with a nonessential yeast gene, MOB2. Mob1 is a phosphoprotein in vivo and a substrate for the Mps1p kinase in vitro. Conditional alleles of MOB1 cause a late nuclear division arrest at restrictive temperature []. This family also includes phocein Q9QYW3 from SWISSPROT, a rat protein that by yeast two hybrid interacts with striatin [].; PDB: 2HJN_A 1PI1_A 1R3B_A.
Probab=98.95 E-value=6.1e-11 Score=103.37 Aligned_cols=134 Identities=26% Similarity=0.421 Sum_probs=95.0
Q ss_pred cCCCCCCchhHHHhcHHHHHHHHHHHHhhhcccccCCCCCCCCCCCceeeeeccccccccCCCCCcccCCcchhhhhhhh
Q psy9562 52 QLPEGEDMNDWIAVHVVDFFNRINLIYGTVSEFCTEESCPTMSGGPRINLIYGTVSEFCTEESCPTMSGGPRYEYLWAKY 131 (267)
Q Consensus 52 ~lP~G~D~neWiA~h~~dffneinll~~~vsefCT~~tCP~m~~~~~~~~~~~~~~e~Ct~~~~p~Msag~~~~~~~~~~ 131 (267)
.|..| |+.+-++.+.....|+| ++.+++ +| .+++|++||+++|+||++
T Consensus 7 ~l~~~-~l~~~V~lP~g~d~~eW-la~~~~-~f-----------~~~in~l~~~v~e~Ct~~------------------ 54 (175)
T PF03637_consen 7 TLGKG-NLRTLVKLPKGVDENEW-LAVHTV-DF-----------FNEINLLYGVVSEFCTPE------------------ 54 (175)
T ss_dssp HCCGG--HHHHCS-STT--HHHH-HHHHHH-HH-----------HHHHHHHHHHHGGGS-TT------------------
T ss_pred HHhcC-CHHHHhcCcCCCChhhH-HHHhhH-HH-----------HHHHHHHHhhccCcCCcc------------------
Confidence 36788 99999999999999999 999998 88 568999999999999997
Q ss_pred hcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHHH---------------hhcCCCCCCCCCCCCCCCc----chHH
Q psy9562 132 HVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWIE---------------GQINDENLFPVSTDIPFPK----TFVN 192 (267)
Q Consensus 132 ~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~~---------------~~l~De~iFPt~~~~~FP~----~F~~ 192 (267)
+||+|.+++++ .+ .|+. ..++.-.-- .+++..||. .|++
T Consensus 55 ------------------tCP~Msag~~~-~Y--lw~d~~~kp~~~~A~~Yi~~~l~w~~~~-l~d~~iFPt~~~~~fp~ 112 (175)
T PF03637_consen 55 ------------------TCPTMSAGPNW-EY--LWADHKKKPVKCSAPQYIDHLLDWIQSQ-LNDEKIFPTKPGVPFPK 112 (175)
T ss_dssp ------------------TTSSEESSTTC-EE---BSSSTTS-BS--HHHHHHHHHHHHHHH-HTSTTTSSSSTTS-TTT
T ss_pred ------------------cCcCccCCccc-ee--eeeccCCCCcccCHHHHHHHHHHHHHHH-ccCcccCCCccccchhH
Confidence 45555554443 22 4444 222211100 056678995 5999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCC
Q psy9562 193 LCRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLV 242 (267)
Q Consensus 193 ~~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li 242 (267)
.+..++++|||+++|||+|.|.+ +.+.-.+++.. .|+..+.++|-++
T Consensus 113 ~f~~~v~~I~rrLfRvyaHiY~~--H~~~~~~l~~~-~hln~~F~hF~~f 159 (175)
T PF03637_consen 113 NFKKTVKKIFRRLFRVYAHIYHH--HFEQFVELELE-AHLNTCFKHFVLF 159 (175)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHH--CHHHHHHTT-H-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcch-HHHHHHHHHHHHH
Confidence 99999999999999999999976 44455577765 8999988888654
No 8
>PRK00811 spermidine synthase; Provisional
Probab=35.94 E-value=61 Score=30.02 Aligned_cols=90 Identities=16% Similarity=0.324 Sum_probs=58.6
Q ss_pred CCceeeeeccccccccCCCCCcccCCcchhhhhhhhhcccccceeeEeccCCCCCCCCCCChHHHHHHHHHHHHhhcCCC
Q psy9562 96 GPRINLIYGTVSEFCTEESCPTMSGGPRYEYLWAKYHVNNCYWYEYLWADGAKYKKPTALPAPQYIALLMDWIEGQINDE 175 (267)
Q Consensus 96 ~~~~~~~~~~~~e~Ct~~~~p~Msag~~~~~~~~~~~~~~~~~~~ylw~d~~~~k~p~~~~Ap~Yi~~l~~w~~~~l~De 175 (267)
.||++++.++...+= .....+|. ..+.|- ..|...+..-|....+.-+...|++.
T Consensus 130 d~rv~v~~~Da~~~l-------~~~~~~yD---------------vIi~D~---~dp~~~~~~l~t~ef~~~~~~~L~~g 184 (283)
T PRK00811 130 DPRVELVIGDGIKFV-------AETENSFD---------------VIIVDS---TDPVGPAEGLFTKEFYENCKRALKED 184 (283)
T ss_pred CCceEEEECchHHHH-------hhCCCccc---------------EEEECC---CCCCCchhhhhHHHHHHHHHHhcCCC
Confidence 468999999977651 11233566 777775 23443344456666677788999988
Q ss_pred CCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhh
Q psy9562 176 NLFPVSTDIPFPKTFVNLCRKILTRLFRVFVHVYIHH 212 (267)
Q Consensus 176 ~iFPt~~~~~FP~~F~~~~~~i~rrLfRv~aHiY~hH 212 (267)
-+|=...+.++-. +..++.|.++|=.+|.|++.-+
T Consensus 185 Gvlv~~~~~~~~~--~~~~~~i~~tl~~~F~~v~~~~ 219 (283)
T PRK00811 185 GIFVAQSGSPFYQ--ADEIKDMHRKLKEVFPIVRPYQ 219 (283)
T ss_pred cEEEEeCCCcccC--HHHHHHHHHHHHHHCCCEEEEE
Confidence 8886655544322 5577788888888887776533
No 9
>PF04417 DUF501: Protein of unknown function (DUF501); InterPro: IPR007511 This is a family of uncharacterised bacterial proteins.
Probab=26.10 E-value=1.5e+02 Score=25.31 Aligned_cols=75 Identities=20% Similarity=0.234 Sum_probs=54.7
Q ss_pred CC-CCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCcchHHHHHHHHHHHHHHhhcCCCCCCccchHH
Q psy9562 178 FP-VSTDIPFPKTFVNLCRKILTRLFRVFVHVYIHHFDRIVSIGAEPHVNTCYKHFYYFIREFDLVNVKELEPLRE 252 (267)
Q Consensus 178 FP-t~~~~~FP~~F~~~~~~i~rrLfRv~aHiY~hHf~~~~~l~~e~hlNt~fkHF~~F~~eF~Li~~kel~Pl~~ 252 (267)
.| ..++.|||..|-=+|+.+.+.+-|+=++=...-.+....-+.+-.---.-.|--+-..+-.|+++++.+=++.
T Consensus 16 ~P~l~~g~PFPTlfwLtcP~L~~~isrLE~~G~i~~l~~~l~~d~~l~~~~~~aH~~y~~~R~~ll~~~~~~~~~~ 91 (139)
T PF04417_consen 16 APRLVDGKPFPTLFWLTCPYLVKAISRLEAEGGIAELEERLAEDEELAEAYRRAHRRYAALRWSLLSEEEREFLER 91 (139)
T ss_pred ccCCCCCccCCccHhhcCHHHHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHh
Confidence 47 6788999999999999999999999888777777664443333111112368888899999998887654444
No 10
>PF08096 Bombolitin: Bombolitin family; InterPro: IPR012534 This family consists of the bombolitin peptides that are found in the venom of the bumblebee Megabombus pennsylvanicus (American common bumblebee). Bombolitins are structurally and functionally very similar. They lyse erythrocytes and liposomes, release histamine from rat peritoneal mast cells, and stimulate phospholipase A2 from different sources [].; GO: 0009405 pathogenesis, 0043303 mast cell degranulation, 0005576 extracellular region
Probab=17.31 E-value=1.1e+02 Score=17.84 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHH
Q psy9562 194 CRKILTRLFRVFVHV 208 (267)
Q Consensus 194 ~~~i~rrLfRv~aHi 208 (267)
+..|+.+|-.|++|+
T Consensus 3 i~dilaklgkvlahv 17 (17)
T PF08096_consen 3 ITDILAKLGKVLAHV 17 (17)
T ss_pred HHHHHHHHHHHHhcC
Confidence 567888888999885
Done!