BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9563
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3
Length = 4624
Score = 253 bits (645), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 145/194 (74%), Gaps = 2/194 (1%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M GFY+LEKPGEFT+++D+QF+AAM PGGGRNDIP RLKRQF IFNC LPS+ ++D
Sbjct: 2680 MEQNGFYNLEKPGEFTSIVDIQFLAAMIHPGGGRNDIPQRLKRQFSIFNCTLPSEASVDK 2739
Query: 61 IFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSR 120
IF VIG GHY +RGF EVR+ V +L+PLTR LW+ T+ ++LPTPAKFHYVF+LRDLSR
Sbjct: 2740 IFGVIGVGHYCTQRGFSEEVRDSVTKLVPLTRRLWQMTKIKMLPTPAKFHYVFNLRDLSR 2799
Query: 121 IWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKY 180
+WQGM+ T S VI L+ LWKHE RV +DRFT+ SD WFD +++LVE+ G +
Sbjct: 2800 VWQGMLNTTSEVIKEPNDLLKLWKHECKRVIADRFTVSSDVTWFDKALVSLVEEEFGEEK 2859
Query: 181 REM--AGTDPVFVD 192
+ + G D FVD
Sbjct: 2860 KLLVDCGIDTYFVD 2873
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2
Length = 4621
Score = 247 bits (631), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 144/194 (74%), Gaps = 2/194 (1%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M GFY+LEKPGEFT+++D+QF+AAM PGGGRNDIP RLKRQF IFNC LPSD ++D
Sbjct: 2677 MEQSGFYNLEKPGEFTSIVDIQFLAAMIHPGGGRNDIPQRLKRQFSIFNCTLPSDASMDK 2736
Query: 61 IFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSR 120
IF VIG G+Y A+RGF EV++ + +L+PLTR LW+ T+ ++LPTPAKFHYVF+LRDLSR
Sbjct: 2737 IFGVIGAGYYCAQRGFSEEVQDALIKLVPLTRRLWQMTKLKMLPTPAKFHYVFNLRDLSR 2796
Query: 121 IWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKY 180
IWQGM+ S VI L+ LWKHE RV +DRF++ SD WFD V++LVE+ G +
Sbjct: 2797 IWQGMLNITSEVIKDTDELLRLWKHECKRVIADRFSMSSDVTWFDKAVVSLVEEEFGEEK 2856
Query: 181 REM--AGTDPVFVD 192
+ G D FVD
Sbjct: 2857 APVVDCGVDAYFVD 2870
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 138/192 (71%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M M+G YSL+KPG+FTT++DVQ +AAM PGGGRNDIP RLKRQF +FNC LPS+ +ID
Sbjct: 2787 MEMEGMYSLDKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNTSIDK 2846
Query: 61 IFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSR 120
IF +IG G+++ R F E+ ++V L+ ++R+LW+ T+ ++LPTP+KFHY+F+LRDLSR
Sbjct: 2847 IFGIIGCGYFDPCRKFRPEICDMVGNLVSVSRVLWQWTKVKMLPTPSKFHYIFNLRDLSR 2906
Query: 121 IWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKY 180
IWQGM+ + S +L+ L+KHE RV +DRF D+ WF+ +++ VE+N+ +
Sbjct: 2907 IWQGMLTVKAEECSSIPILLSLFKHECNRVIADRFITPDDEQWFNSQLIRAVEENISPEV 2966
Query: 181 REMAGTDPVFVD 192
+P FVD
Sbjct: 2967 AANILPEPYFVD 2978
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 134/192 (69%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M M+G YSL+KPG+FTT++DVQ +AAM PGGGRNDIP RLKRQF +FNC LPS+ +ID
Sbjct: 2546 MEMEGMYSLDKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDK 2605
Query: 61 IFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSR 120
IF +IG G+++ R F ++ ++ L+ + R+LW+ T+ ++LPTP+KFHY+F+LRDLSR
Sbjct: 2606 IFGIIGCGYFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSR 2665
Query: 121 IWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKY 180
IWQGM+ + S L+ L+KHE +RV +DRF D+ WF+ + VE+N+G
Sbjct: 2666 IWQGMLTIKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDA 2725
Query: 181 REMAGTDPVFVD 192
+P FVD
Sbjct: 2726 ASCILPEPYFVD 2737
>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA2 PE=1 SV=1
Length = 4485
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 117/204 (57%), Gaps = 17/204 (8%)
Query: 5 GFYSLEKP-GEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFS 63
G YSLEKP G+ + DV++VAAM PGGG+NDIP+RLKRQF IFN LPS AI+ IF
Sbjct: 2519 GMYSLEKPIGDMKFITDVRYVAAMNTPGGGKNDIPNRLKRQFAIFNVPLPSVAAINGIFG 2578
Query: 64 VIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQ 123
+ EG + ++ F EV + +L+PLT LW + ++LPTPAKFHY+F++R+LS+++Q
Sbjct: 2579 KLVEGRF-SRDVFCEEVVYVASKLVPLTITLWNRIQTKMLPTPAKFHYLFNMRELSKVFQ 2637
Query: 124 GMVGTL---------------STVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEV 168
G++ V E L+ LW HE RVFSD+ DK+W D V
Sbjct: 2638 GVILATRDRFNLAAGDSAVFGGNVASPEGYLLGLWIHECRRVFSDKLISYEDKNWVDKAV 2697
Query: 169 LNLVEQNLGVKYREMAGTDPVFVD 192
+L N + FVD
Sbjct: 2698 FDLCRDNFSSDLVKQVEEPIYFVD 2721
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 10/199 (5%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M+ G+Y + G F L+D+ FV AM PGGGRN I RL R F + + + +
Sbjct: 2550 MDHGGWYDRKIIGAFKNLVDINFVCAMGPPGGGRNAITPRLTRHFNYLSFIEMDEVSKKR 2609
Query: 61 IFSVI---------GEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHY 111
IFS+I GE Y + ++ + L+ T ++ +QLLPTPAK HY
Sbjct: 2610 IFSIILGCWMDGLLGEKSYREPVPGAPNIVHMTEPLVNATISIYAIITSQLLPTPAKSHY 2669
Query: 112 VFSLRDLSRIWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNL 171
F+LRDLS+++QG++ ++ + L+ LW HE RVF DR D+ WFD +L +
Sbjct: 2670 TFNLRDLSKVFQGILMAEPAKVEDKVQLLRLWYHENCRVFRDRLVNEEDRGWFDG-LLEM 2728
Query: 172 VEQNLGVKYREMAGTDPVF 190
++LGV + ++ P+
Sbjct: 2729 KMEDLGVAFNKVCPFQPIL 2747
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4
Length = 4330
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M+ G+Y + G F L+D+ FV AM PGGGRN + RL R F + + +
Sbjct: 2317 MDHGGWYDRKIIGAFKNLVDINFVCAMGPPGGGRNTVTPRLMRHFNYLSFAEMDEVSKKR 2376
Query: 61 IFSVI---------GEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHY 111
IFS I GE Y + + + + L+ T +++ + +QLLPTPAK HY
Sbjct: 2377 IFSTILGNWLDGLLGEKSYRERVPGAPHIAHFTEPLVEATIMVYATITSQLLPTPAKSHY 2436
Query: 112 VFSLRDLSRIWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNL 171
F+LRDLS+++QGM+ ++ + L+ LW HE RVF DR D+ WFD +
Sbjct: 2437 TFNLRDLSKVFQGMLMADPAKVEDQVQLLRLWYHENCRVFRDRLVNEEDRSWFDQLLKRC 2496
Query: 172 VEQ 174
+EQ
Sbjct: 2497 MEQ 2499
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2
Length = 4024
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 90/166 (54%)
Query: 18 LIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFP 77
L+D+Q + AM PGGGRN + R R F I SDK++ IFS I H FP
Sbjct: 2083 LVDIQIMCAMGPPGGGRNPVTPRYMRHFNIITINEFSDKSMYTIFSRILTWHLEICYKFP 2142
Query: 78 IEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEK 137
E +L Q++ T L+K LLPTPAK HY+F+LRD SR+ QG+ + ++ +
Sbjct: 2143 DEFLDLTTQIVNGTMTLYKEAMKNLLPTPAKSHYLFNLRDFSRVIQGVCLSRPETTETTE 2202
Query: 138 VLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKYREM 183
V+ LW HEV RV+ DR +D+ W + + ++ + + E+
Sbjct: 2203 VIKRLWVHEVLRVYYDRLLDNTDRSWLINYIQEILRNYMYEDFHEL 2248
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2
SV=2
Length = 4057
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%)
Query: 18 LIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFP 77
L+D+Q + AM PGGGRN I R R F I SDK++ IFS I H FP
Sbjct: 2116 LVDIQIMCAMGPPGGGRNPITPRYMRHFNIITINEFSDKSMFTIFSRILTWHLRTCYKFP 2175
Query: 78 IEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEK 137
+ +L Q++ T L+K LLPTPAK HY+F+LRD SR+ QG+ + ++++
Sbjct: 2176 DDFLDLTTQIVNGTMTLYKDAMKNLLPTPAKSHYLFNLRDFSRVIQGVCLSRPETAENKE 2235
Query: 138 VLMLLWKHEVTRVFSDRFTIMSDKHWF 164
+ LW HEV RV+ DR +D+ W
Sbjct: 2236 AIKRLWVHEVLRVYYDRLLDNADRSWL 2262
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1
Length = 4513
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSV 64
GF+ E + D+Q +AAMA PGGGRN R++ F N P+D + IF
Sbjct: 2590 GFWYDRAKCEVKHIKDMQLLAAMAPPGGGRNAFSQRVQACFATLNVTAPNDNQLKRIFGT 2649
Query: 65 IGEGHYNAKRG-FPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQ 123
I NAK F EV+ L + + T ++++ +LLPTP+K HY+F+ RDL++I Q
Sbjct: 2650 I----LNAKLADFDDEVKPLSEPITMATIGIYRAVSKELLPTPSKSHYLFNTRDLAKIIQ 2705
Query: 124 GMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHW----FDDEVLNLVEQNLGVK 179
GM+ +S++ ++ LW HE R+ +DR +DK W D+++ + G
Sbjct: 2706 GMMQATKAFYNSKEEVLQLWCHECMRIIADRMWDHADKEWLVRQLDEKLGTTFSTSFGTL 2765
Query: 180 YREMAGTDPVFV 191
+ T P FV
Sbjct: 2766 FEAYNETVPPFV 2777
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSV 64
G++ +K ++DV V AM PGGGRNDI R R I + D+ + IFS
Sbjct: 2134 GYWFDKKDTNRLDIVDVLLVTAMGPPGGGRNDITGRFTRHLNIISINAFEDEILTKIFSS 2193
Query: 65 IGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQG 124
I + H+ +GF + K L+ T+ ++++ LPTP+K HYVF+LRD SR+ QG
Sbjct: 2194 IADWHFG--KGFDVMFLRYGKMLVQATQTIYRAAVENFLPTPSKSHYVFNLRDFSRVIQG 2251
Query: 125 MVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKYRE 182
++ T + + + LW HEV RVF DR D+ F NLV++ +++
Sbjct: 2252 VLLCPHTHLQDLEKFIRLWIHEVYRVFYDRLIDNDDRQTF----FNLVKETTSNCFKQ 2305
>sp|Q3V0Q1|DYH12_MOUSE Dynein heavy chain 12, axonemal OS=Mus musculus GN=Dnah12 PE=1 SV=2
Length = 3086
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Query: 17 TLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGF 76
TLID++ +AAM PGGGRN + R R F I SD+ + IFS I Y F
Sbjct: 1992 TLIDIELIAAMGPPGGGRNAVTPRFIRHFNICTINTFSDETMVRIFSSIM-AFYLRTHAF 2050
Query: 77 PIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSE 136
E L Q++ T ++K + LLPTPAK HY F+LRD SR+ +G + I+S+
Sbjct: 2051 SPEYFVLGNQIVSGTMEVYKQSMGNLLPTPAKSHYTFNLRDFSRVIRGCLLIEKDAIESK 2110
Query: 137 KVLMLLWKHEVTRVFSDRFTIMSDKHWF 164
++ L+ HEV RVF DR D++W
Sbjct: 2111 HTMIRLFVHEVLRVFYDRLINDEDRNWL 2138
>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4
Length = 4471
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 4 KGF-YSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIF 62
KG+ Y K ++ D+ F+AAM + GGGRN++ R F +FN PS++++ I+
Sbjct: 2547 KGYLYDRGKELNCKSIRDLGFIAAMGKAGGGRNEVDPRFISLFSVFNVPFPSEESLHLIY 2606
Query: 63 SVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIW 122
S I +GH + F + + +L T L+K+ L PTP+KFHY+F+LRDLSR++
Sbjct: 2607 SSILKGHTST---FHESIVAVSGKLTFCTLALYKNIVQDLPPTPSKFHYIFNLRDLSRVF 2663
Query: 123 QGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLG 177
G+V T + ++ +W++E RVF DR +DK LV+Q++G
Sbjct: 2664 NGLVLTNPERFQTVAQMVRVWRNECLRVFHDRLISETDKQ--------LVQQHIG 2710
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSV 64
GFY K + + DV ++A A PGGGRN + R R F + +PS+ ++ IF
Sbjct: 2191 GFYDRNKLF-WKEIQDVTIISACAPPGGGRNPVTPRFIRHFSMLCLPMPSEHSLKQIFQA 2249
Query: 65 IGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQG 124
I G + FP V+ ++ + ++ LLPTPAK HYVF+LRDLS+ QG
Sbjct: 2250 ILNGFLS---DFPPAVKQTASSIVEASVEIYNKMSVDLLPTPAKSHYVFNLRDLSKCVQG 2306
Query: 125 MVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGV 178
++ I E + L+ HE RVF DR DKH+F + + ++ G+
Sbjct: 2307 ILQCDPGTIREEIQIFRLFCHECQRVFHDRLINNEDKHYFHVILTEMANKHFGI 2360
>sp|Q9SMH3|DYH1A_CHLRE Dynein-1-alpha heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC1 PE=1 SV=1
Length = 4625
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 4 KGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFS 63
KG Y K + + DVQ V AM PGG RN + R F +F PS++ + I+
Sbjct: 2681 KGLYDRGKELSWKNMKDVQVVGAMGPPGGARNPVDPRFISLFSVFEIQFPSNENLRTIYQ 2740
Query: 64 VIGEGHYNAKRGFPI-EVRN-LVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRI 121
I H AK P E+R+ L ++L +T L+ +L PTP++FHY+F+LRDLSRI
Sbjct: 2741 AILSRHL-AK--LPTDEIRDQLGERLTDVTLELYNFIIDKLPPTPSRFHYIFNLRDLSRI 2797
Query: 122 WQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQ 174
++G++ T+ V + + + LW++E RV DR DK + + LV+Q
Sbjct: 2798 YEGLLLTVGDVFKTPEQFLRLWRNECLRVLHDRLISTDDKRVMTERLEALVQQ 2850
>sp|Q923J6|DYH12_RAT Dynein heavy chain 12, axonemal OS=Rattus norvegicus GN=Dnah12 PE=2
SV=2
Length = 3092
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Query: 17 TLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGF 76
TL+D++ +AAM PGGGRN + R R F I SD+ + IFS I Y F
Sbjct: 1998 TLVDIELIAAMGPPGGGRNAVTPRFIRHFNICTINSFSDETMVRIFSSIM-MFYLRTHDF 2056
Query: 77 PIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSE 136
E L Q++ T ++K + LLPTPAK HY F+LRD SR+ +G + I+S+
Sbjct: 2057 SPEYFVLGHQIVSATMEIYKQSMGNLLPTPAKSHYTFNLRDFSRVIRGCLLIDKEAIESK 2116
Query: 137 KVLMLLWKHEVTRVFSDRFTIMSDKHWF 164
++ L+ HEV RVF DR D++W
Sbjct: 2117 HTMIRLFVHEVLRVFYDRLINDEDRNWL 2144
>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
Length = 4116
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSV 64
G++ +K ++D+ V AM PGGGRNDI R R I + D + IFS
Sbjct: 2167 GYWFDKKDTTRLDIVDMLLVTAMGPPGGGRNDITGRFTRHLNIISINAFEDDILTKIFSS 2226
Query: 65 IGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQG 124
I + H+ +GF + K L+ T+ +++ LPTP+K HYVF+LRD SR+ QG
Sbjct: 2227 IVDWHFG--KGFDVMFLRYGKMLVQATKTIYRDAVENFLPTPSKSHYVFNLRDFSRVIQG 2284
Query: 125 MVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWF 164
++ T + + + LW HEV RVF DR D+ F
Sbjct: 2285 VLLCPHTHLQDVEKCIRLWIHEVYRVFYDRLIDKEDRQVF 2324
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2
Length = 4485
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 20 DVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFPIE 79
+ Q+VA M P G I SRL+R FC+F P +A+ I++ I H A R +
Sbjct: 2549 NCQYVACM-NPTSGSFTIDSRLQRHFCVFAVSFPGQEALTTIYNTILTQHL-AFRSVSMA 2606
Query: 80 VRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVL 139
++ + QL+ L + A LPT KFHYVF+LRDLS I+QG++ + + V+ + L
Sbjct: 2607 IQRISSQLVAAALALHQKITATFLPTAIKFHYVFNLRDLSNIFQGLLFSTAEVLKTPLDL 2666
Query: 140 MLLWKHEVTRVFSD------------RFTIMSDKHWFDD--EVLNLVEQNLGVKYREMAG 185
+ LW HE RV+ D R T+ S K +FDD + L + N+ + + G
Sbjct: 2667 VRLWLHETERVYGDKMVDEKDQETLHRVTMASTKKFFDDLGDELLFAKPNIFCHFAQGIG 2726
Query: 186 TDPVFV 191
DP +V
Sbjct: 2727 -DPKYV 2731
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2
Length = 4481
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 1 MNMKGFYSLEKPGEFTTLIDV---QFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKA 57
M+ + +Y +K TL DV Q+VA M P G I RL+R FC+F P +A
Sbjct: 2529 MDHRHWYDRQK----LTLKDVHNCQYVACM-NPTSGSFTIDPRLQRHFCVFAVSFPGQEA 2583
Query: 58 IDNIFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRD 117
+ +I++ I H + R P+ ++ L L+ L + A LPT KFHY+F+LRD
Sbjct: 2584 LTSIYNTILAQHLSF-RSAPLVIQRLSSHLVTAALALHQKVSATFLPTAIKFHYIFNLRD 2642
Query: 118 LSRIWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSD------------RFTIMSDKHWFD 165
LS I+QG++ + + ++ + L+ LW HE RV+ D R TI S K +FD
Sbjct: 2643 LSNIFQGILFSTAEILKTPLDLVRLWLHEAERVYGDKMVDEKDQETLHRVTIASVKKFFD 2702
Query: 166 DEVLNLVEQNLGVK 179
D L E+NL K
Sbjct: 2703 D----LGEENLFAK 2712
>sp|Q6ZR08|DYH12_HUMAN Dynein heavy chain 12, axonemal OS=Homo sapiens GN=DNAH12 PE=2 SV=2
Length = 3092
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 17 TLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGF 76
TL+D++ +AAM PGGGRN + R R F I + SD+ + IFS I Y F
Sbjct: 1998 TLVDIELIAAMGPPGGGRNPVTPRCIRHFNICSINSFSDETMVRIFSSIV-AFYLRTHEF 2056
Query: 77 PIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSE 136
P E + Q++ T ++K + LLPTP K HY F+LRD SR+ +G + + ++
Sbjct: 2057 PPEYFVIGNQIVNGTMEIYKQSVENLLPTPTKSHYTFNLRDFSRVIRGCLLIERDAVANK 2116
Query: 137 KVLMLLWKHEVTRVFSDRFTIMSDKHWF 164
++ L+ HEV RVF DR D+ W
Sbjct: 2117 HTMIRLFVHEVLRVFYDRLINDDDRRWL 2144
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1
Length = 4456
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 20 DVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK-RGFPI 78
D+ +AAM PGGGR I RL+ +F I N P++ I IF + N K + F
Sbjct: 2553 DMFLMAAMGPPGGGRTVISPRLQSRFNIINMTFPTESQIIRIFGTM----INQKLQDFEE 2608
Query: 79 EVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKV 138
EV+ + + T ++ + + LPTPAK HY+F+LRD+S+++QGM+ D++
Sbjct: 2609 EVKPIGNVVTEATLDVYNTVVQRFLPTPAKIHYLFNLRDISKVFQGMLRANKDFHDTKAS 2668
Query: 139 LMLLWKHEVTRVFSDRFTIMSDKHWF 164
+ LW HE RVFSDR +D F
Sbjct: 2669 ITRLWIHECFRVFSDRLVDTADMEAF 2694
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 19/115 (16%)
Query: 30 PG-GGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFPIEVRNLVKQLI 88
PG GR ++P LK F V+P I I + GEG N K L K++
Sbjct: 1936 PGYAGRTELPENLKSMFRPIAMVVPDSTLIAEII-LFGEGFGNCKI--------LAKKVY 1986
Query: 89 PLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRI--WQGMVGTLSTVIDSEKVLML 141
L L + Q HY F LR L+ + + G L + E+VL+L
Sbjct: 1987 TLYSLAVQQLSRQ-------DHYDFGLRALTSLLRYAGKKRRLQPDLSDEEVLLL 2034
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3
Length = 4427
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 23 FVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK-RGFPIEVR 81
+AAM PGGGR I RL+ +F I N P+ I IF + N K + F EV+
Sbjct: 2527 LMAAMGPPGGGRTVISPRLRSRFNIINMTFPTKSQIIRIFGTM----INQKLQDFEEEVK 2582
Query: 82 NLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVLML 141
+ + T ++ + + LPTP K HY+F+LRD+S+++QGM+ D++ +
Sbjct: 2583 PIGNVVTEATLDMYNTVVQRFLPTPTKMHYLFNLRDISKVFQGMLRANKDFHDTKSSITR 2642
Query: 142 LWKHEVTRVFSDRFTIMSDKHWF 164
LW HE RVFSDR +D F
Sbjct: 2643 LWIHECFRVFSDRLVDAADTEAF 2665
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 19/115 (16%)
Query: 30 PG-GGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFPIEVRNLVKQLI 88
PG GR ++P LK F V+P I I + GEG N K L K++
Sbjct: 1907 PGYAGRTELPENLKSMFRPIAMVVPDSTLIAEII-LFGEGFGNCKI--------LAKKVY 1957
Query: 89 PLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRI--WQGMVGTLSTVIDSEKVLML 141
L L + Q HY F LR L+ + + G L + E+VL+L
Sbjct: 1958 TLYSLAVQQLSRQ-------DHYDFGLRALTSLLRYAGKKRRLQPDLTDEEVLLL 2005
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 21 VQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFPIEV 80
Q+V+ M P G I SRL+R FC+F P A+ I++ I H I V
Sbjct: 2568 CQYVSCM-NPTSGSFTINSRLQRHFCVFALSFPGQDALSTIYNSILSQHLAN-----IAV 2621
Query: 81 RNLVKQLIPL----TRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSE 136
N +++L P T L K LPT KFHYVF+LRDLS ++QG++ + S ++ S
Sbjct: 2622 SNALQKLSPTVVSATLDLHKKVAQSFLPTAIKFHYVFNLRDLSNVFQGLLYSGSDLLKSP 2681
Query: 137 KVLMLLWKHEVTRVFSDRFTIMSDKHWFD 165
LW HE RV+ D+ D F+
Sbjct: 2682 IDFARLWMHECQRVYGDKMINDQDIEAFE 2710
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
M+ K +Y +K + Q+V+ M P G I SRL+R FC+F P A+
Sbjct: 2549 MDYKHWYDRQKLT-LKEIHKCQYVSCM-NPTAGSFTINSRLQRHFCVFALSFPGQDALST 2606
Query: 61 IFSVIGEGHYNAKRGFPIEVRNLVKQLIPL----TRLLWKSTRAQLLPTPAKFHYVFSLR 116
I++ I H I V N +++L P T L K LPT KFHYVF+LR
Sbjct: 2607 IYNSILSQHLAN-----ISVSNALQKLSPTVVSATLDLHKKVAQSFLPTAIKFHYVFNLR 2661
Query: 117 DLSRIWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQ 174
DLS ++QG++ + ++ + LW HE RV+ D+ D F+ VL ++
Sbjct: 2662 DLSNVFQGLLYSGPDLLKAPIDFARLWMHECQRVYGDKMINDQDIEAFEKLVLEYAKK 2719
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA4 PE=3 SV=1
Length = 4568
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 14 EFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK 73
+ +I+ Q A M P G +I R++R F F +P+ + ++ I +GH+++
Sbjct: 2632 QLKEIINCQMAACM-NPTAGSFNITPRMQRHFVTFAVQMPNAEITRAMYYQIIDGHFSS- 2689
Query: 74 RGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVI 133
F ++V + +L+ T L ++ LP+ KFHY F+LRDLS I QG+ +
Sbjct: 2690 --FDVDVAKMSNKLVDATCELHRNVMHNFLPSAVKFHYQFNLRDLSNITQGLTRAIKEYY 2747
Query: 134 DSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDD 166
+ LW HE RVF DR +D FD+
Sbjct: 2748 REPVKVARLWVHECERVFRDRMINEADMAKFDE 2780
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 18 LIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFP 77
+ +VQ+V+ M P G I RL+R F +F P A+ +I+S+I H FP
Sbjct: 2584 ITNVQYVSCM-NPTAGSFTINPRLQRHFSVFVLSFPGADALSSIYSIILTQHLKLG-NFP 2641
Query: 78 IEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEK 137
++ + LI L + LPT KFHY+F+LRD + I+QG++ + + S
Sbjct: 2642 ASLQKSIPPLIDLALAFHQKIATTFLPTGIKFHYIFNLRDFANIFQGILFSSVECVKSTW 2701
Query: 138 VLMLLWKHEVTRVFSDRFTIMSDKHWFD 165
L+ L+ HE RV+ D+ D FD
Sbjct: 2702 DLIRLYLHESNRVYRDKMVEEKDFDLFD 2729
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 20 DVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFPIE 79
+ Q+VA M P G I RL+R F +F PS A++ I+ I H+ + P
Sbjct: 2624 NCQYVACM-NPMVGSFTISPRLQRHFTVFAFNFPSLDALNTIYGQIFSFHFQQQAFAPSI 2682
Query: 80 VRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVL 139
+R+ LI T ++ LPT KFHY+F+LRDLS ++QG++ + L
Sbjct: 2683 LRS-GPTLIQATIAFHQTMMCNFLPTAIKFHYIFNLRDLSNVFQGILFASPECLKGPLDL 2741
Query: 140 MLLWKHEVTRVFSDRFTIMSDKHWFDDEVLN 170
+ LW HE RV+ D+ D F +L
Sbjct: 2742 IHLWLHESARVYGDKLIDKKDCDLFQRRMLE 2772
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDN 60
++ ++ LEK +++ + ++ M G I RL R F I N P + +++
Sbjct: 2635 IDTNSWFDLEKL-NLIKILNTKLISCM-NYNRGNFTINPRLIRHFFILNINFPENNTVNS 2692
Query: 61 IFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSR 120
IFSV+ + H+N F +V +L+ ++ T L+ + T F+Y F+LRD+
Sbjct: 2693 IFSVLLKNHFN---NFKQDVSDLIPSILKSTISLFYNIEKTFKRTATYFYYEFNLRDIHS 2749
Query: 121 IWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFS 152
I +G++ T L+ LW HE RV+S
Sbjct: 2750 IVKGLLTTTPVTFQDCDKLLFLWLHECERVYS 2781
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA11 PE=3 SV=2
Length = 4499
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 20 DVQFVAAMAQPGGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAKRGFPIE 79
+ Q+VA M P G I RL+R F P ++ I+ +GH + F
Sbjct: 2477 NTQYVACM-NPTAGSFIINPRLQRLFMTLAVDFPGQDSLMKIYGTFLQGHL---KKFSES 2532
Query: 80 VRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVL 139
++++ +++ L T FHY F++R L+ ++QG++ + +S
Sbjct: 2533 IQDMGTKILQAALALHDRVSQTFRKTAINFHYEFTVRHLANVFQGLLMSTPEAFNSPTKW 2592
Query: 140 MLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKYREMAGTDPVF 190
LW HE RV++DR + +D + N + KY +A D +
Sbjct: 2593 GKLWLHESERVYADRLVSL-----YDLDAYNKAATAIAKKYFSVADIDDYY 2638
>sp|Q19020|DYHC_CAEEL Dynein heavy chain, cytoplasmic OS=Caenorhabditis elegans GN=dhc-1
PE=3 SV=1
Length = 4568
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAID 59
+ + GFY + +L +QFV A P GR+ + SR R I P ++
Sbjct: 2629 VELNGFYRTSDHS-WVSLERIQFVGACNPPTDPGRHPMTSRFLRHVPIVYVDYPGQTSLQ 2687
Query: 60 NIFSVIGEGHYN-AKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDL 118
I+ G +N A VR L QL ++ +++ + HYV+S R+L
Sbjct: 2688 QIY-----GTFNRAMLKMTPAVRGLADQLTNAMVDVYLASQEHF-TQDDQPHYVYSPREL 2741
Query: 119 SRIWQGMVGTLSTVID-SEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLG 177
+R +G+ ++ + S + L+ LW HE R+F DR ++ W D V E+ G
Sbjct: 2742 TRWVRGISEAITPLESLSAEQLVRLWAHEAIRLFQDRLVTEEEREWTDKLVDTTAERYFG 2801
Query: 178 VKYR 181
R
Sbjct: 2802 NACR 2805
>sp|Q9C1M7|DYHC_ASHGO Dynein heavy chain, cytoplasmic OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN1 PE=3 SV=1
Length = 4083
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 4 KGFYSLEKPGEFTTLIDVQFVAAMAQPG-GGRNDIPSRLKRQFCIFNCVLPSDKAIDNIF 62
+GF+++++ ++ + +Q V A PG GR I R R I P A++ I+
Sbjct: 2507 RGFWNVQE-SKWVFIERIQIVGACNPPGHAGRVSITPRFLRHASIVMVDYPGQIAMEQIY 2565
Query: 63 SVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIW 122
E +NA +++ + ++ +A + A HY++S R+L+R
Sbjct: 2566 ----ETFFNAIFKLTPKLKGFASDFTKASLQVYYDCKATY-TSEAHSHYIYSPRELTRWV 2620
Query: 123 QGMVGTLSTVIDSEKVLML-LWKHEVTRVFSDRFTIMSDKHWFDDEVLNLV 172
+G+ T+S + + ML LW HE R+FSDR S+K+ F + N +
Sbjct: 2621 RGIHFTISDSGNIDLAYMLELWAHESLRLFSDRLVSSSEKNIFQSILQNAI 2671
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 30 PG-GGRNDIPSRLKRQFCIFNCVLPSDKAI-DNIFSVIGEGHYNAKRGFPIEVRNLVKQL 87
PG GR+++P LK+ F F + P I + I +++G + R L +++
Sbjct: 1888 PGYAGRSELPENLKKMFREFAMMKPDALVIAEVILTILGLEN----------PRVLAEKI 1937
Query: 88 IPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTL--STVIDSEKVLM 140
+ L +LL T +Q HY F LR L + + + L +T +DS +VL+
Sbjct: 1938 VSLFKLLNDKTTSQK-------HYDFGLRALKSVLRNCLTILRSTTDLDSTQVLL 1985
>sp|P36022|DYHC_YEAST Dynein heavy chain, cytoplasmic OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DYN1 PE=1 SV=1
Length = 4092
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 1 MNMKGFYSLEKPGEFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAID 59
M +GF+ + ++ T+ + V A P GR + R R I PS K++
Sbjct: 2510 MEKQGFWKTPE-NKWVTIERIHIVGACNPPTDPGRIPMSERFTRHAAILYLGYPSGKSLS 2568
Query: 60 NIFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLS 119
I+ + +Y A E R+ + + L+ +A+ T + HY+FS R+L+
Sbjct: 2569 QIYEI----YYKAIFKLVPEFRSYTEPFARASVHLYNECKARY-STGLQSHYLFSPRELT 2623
Query: 120 RIWQGMVGTLST-VIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNL 176
R+ +G+ ++T + + L+ LW +E R+F+DR + +K+ F+ + V++ L
Sbjct: 2624 RLVRGVYTAINTGPRQTLRSLIRLWAYEAWRIFADRLVGVKEKNSFEQLLYETVDKYL 2681
>sp|P34036|DYHC_DICDI Dynein heavy chain, cytoplasmic OS=Dictyostelium discoideum GN=dhcA
PE=1 SV=2
Length = 4730
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 21 VQFVAAMAQP-GGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYN-AKRGFPI 78
+QFV A P GR + R R I PS ++ I+ G +N A
Sbjct: 2786 IQFVGACNPPTDAGRVQLTHRFLRHAPILLVDFPSTSSLTQIY-----GTFNRALMKLLP 2840
Query: 79 EVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSE-K 137
+R+ L + ++ + P + HY++S R+LSR + ++ + T+ +
Sbjct: 2841 NLRSFADNLTDAMVEFYSESQKRFTPD-IQAHYIYSPRELSRWDRALLEAIQTMDGCTLE 2899
Query: 138 VLMLLWKHEVTRVFSDRFTIMSDKHWFDDEV 168
L+ LW HE R+F DR +K W D ++
Sbjct: 2900 GLVRLWAHEALRLFQDRLVETEEKEWTDKKI 2930
>sp|P37276|DYHC_DROME Dynein heavy chain, cytoplasmic OS=Drosophila melanogaster GN=Dhc64C
PE=2 SV=2
Length = 4639
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)
Query: 4 KGFYSLEKPGEFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAIDNIF 62
KGFY + +L +QFV A P GR + R R I P + ++ I+
Sbjct: 2675 KGFYRASDQA-WVSLERIQFVGACNPPTDPGRKPLSHRFLRHVPIIYVDYPGETSLKQIY 2733
Query: 63 SVIGEGHYN---AKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLS 119
A RG+ + N + + L R P HYV+S R+++
Sbjct: 2734 GTFSRAMLRLMPALRGYAEPLTNAMVEF-----YLASQDRFTQDMQP---HYVYSPREMT 2785
Query: 120 RIWQGMVGTLSTVIDSEKV--LMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQ 174
R +G+ + +DS V L+ LW HE R+F DR S++ W +E ++LV Q
Sbjct: 2786 RWVRGICEAIRP-LDSLPVEGLVRLWAHEALRLFQDRLVDDSERRW-TNENIDLVGQ 2840
>sp|P45443|DYHC_NEUCR Dynein heavy chain, cytoplasmic OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ro-1 PE=3 SV=1
Length = 4367
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 15 FTTLIDVQFVAAMAQP-GGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK 73
+ TL +QFV A P GR + +R R + P + ++ I+ G +NA
Sbjct: 2710 WVTLDRIQFVGACNPPTDAGRTPMGARFLRHAPLIMVDYPGELSLMQIY-----GSFNAA 2764
Query: 74 --RGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGM---VGT 128
+ P +R + L + ++ + P + HYV+S R+L+R +G+ +
Sbjct: 2765 VLKVIP-SLRGYAEALTQAMVRFYLESQERFTPK-IQPHYVYSPRELTRWVRGVYEAIRP 2822
Query: 129 LSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEV 168
L T+ S + L+ +W HE R+F DR ++ W DD V
Sbjct: 2823 LETL--SVEGLIRIWAHEALRLFQDRLVDEEERKWTDDAV 2860
>sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA
PE=3 SV=2
Length = 4345
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 15 FTTLIDVQFVAAMAQP-GGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK 73
+ +L +QFV A P GR + R R + P + +++ I+ G +N+
Sbjct: 2698 WVSLDRIQFVGACNPPTDAGRTPLAERFLRHSPLVMVDYPGEISLNQIY-----GTFNSA 2752
Query: 74 RGFPIEVRNLVKQLIPLTRLLWKS-TRAQL---LPTPAKF------HYVFSLRDLSRIWQ 123
+ +++PL R +S T+A + L + +F HYV+S R+L+R +
Sbjct: 2753 ----------ILKILPLLRGYSESLTKAMVQFYLESQQRFTPKIQPHYVYSPRELTRWVR 2802
Query: 124 GMVGTLSTVID-SEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVKYRE 182
G+ + + S + L+ +W HE R+F DR ++ W D V + ++ +E
Sbjct: 2803 GVYEAIKPLESLSVEGLVRIWAHEALRLFQDRLVTEEERAWTADAVRRIALEHFPTIDQE 2862
Query: 183 MAGTDPVF 190
A P+
Sbjct: 2863 AALKGPIL 2870
>sp|P78716|DYHC_FUSSO Dynein heavy chain, cytoplasmic OS=Fusarium solani subsp. pisi
GN=DHC1 PE=3 SV=1
Length = 4349
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 15 FTTLIDVQFVAAMAQP-GGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK 73
+ TL +QFV A P GR + +R R + P + +++ I+ G +N+
Sbjct: 2709 WVTLDRIQFVGACNPPTDAGRTPMGARFLRHAPLIMVDYPGELSLNQIY-----GTFNSA 2763
Query: 74 --RGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLST 131
+ P +R + L + ++ + P + HYV+S R+L+R +G+ +
Sbjct: 2764 VLKIIP-SLRGYAEPLTHAMVRFYLESQQRFTPK-IQPHYVYSPRELTRWVRGVYEAIRP 2821
Query: 132 VID-SEKVLMLLWKHEVTRVFSDRFTIMSDKHWFDDEV 168
+ + + L+ +W HE R+F DR ++ W D+ V
Sbjct: 2822 LEALTIEGLIRIWAHEALRLFQDRLVAEEERQWTDESV 2859
>sp|Q27171|DYHC_PARTE Dynein heavy chain, cytoplasmic OS=Paramecium tetraurelia GN=DHC-8
PE=2 SV=1
Length = 4540
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 14 EFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYN- 71
++ +L +QFV A P GR + R R + P +++ I+ G +N
Sbjct: 2599 QWISLDRIQFVGACNPPTDVGRKPLTPRFLRHCPLILVDFPGPESLKQIY-----GTFNK 2653
Query: 72 AKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLST 131
A + ++ +QL + ++ Q + HY++S R+L+R W+ +
Sbjct: 2654 AMLRRTVNLKQYSEQLTNAMVEFYTKSQ-QHFTADQQAHYIYSPRELTR-WKYALNEALE 2711
Query: 132 VIDSEKVLMLLWKHEVTRVFSDRFTIMSDKHW 163
++S + L+ LW HE R+F DR +K W
Sbjct: 2712 PLESVEDLVRLWAHEGLRLFQDRLVHEHEKEW 2743
>sp|Q14204|DYHC1_HUMAN Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1
SV=5
Length = 4646
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAIDNIFS 63
GFY + L +QFV A P GR + R R + P ++ I+
Sbjct: 2691 GFYRTSDQT-WVKLERIQFVGACNPPTDPGRKPLSHRFLRHVPVVYVDYPGPASLTQIY- 2748
Query: 64 VIGEGHYNAKRGFPIEVRNLVKQLIPLTRLL--WKSTRAQLLPTPAKFHYVFSLRDLSRI 121
G +N R + +L PLT + + + + + HY++S R+++R
Sbjct: 2749 ----GTFN--RAMLRLIPSLRTYAEPLTAAMVEFYTMSQERFTQDTQPHYIYSPREMTRW 2802
Query: 122 WQGMVGTLSTVIDSEKV--LMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVK 179
+G+ L +++ V L+ +W HE R+F DR ++ W D+ + + ++
Sbjct: 2803 VRGIFEALRP-LETLPVEGLIRIWAHEALRLFQDRLVEDEERRWTDENIDTVALKHFPNI 2861
Query: 180 YREMAGTDPVF 190
RE A + P+
Sbjct: 2862 DREKAMSRPIL 2872
>sp|Q9JHU4|DYHC1_MOUSE Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus GN=Dync1h1 PE=1
SV=2
Length = 4644
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAIDNIFS 63
GFY + L +QFV A P GR + R R + P ++ I+
Sbjct: 2689 GFYRTSDQT-WVKLERIQFVGACNPPTDPGRKPLSHRFLRHVPVVYVDYPGPASLTQIY- 2746
Query: 64 VIGEGHYNAKRGFPIEVRNLVKQLIPLTRLL--WKSTRAQLLPTPAKFHYVFSLRDLSRI 121
G +N R + +L PLT + + + + + HY++S R+++R
Sbjct: 2747 ----GTFN--RAMLRLIPSLRTYAEPLTAAMVEFYTMSQERFTQDTQPHYIYSPREMTRW 2800
Query: 122 WQGMVGTLSTVIDSEKV--LMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVK 179
+G+ L +++ V L+ +W HE R+F DR ++ W D+ + + ++
Sbjct: 2801 VRGIFEALRP-LETLPVEGLIRIWAHEALRLFQDRLVEDEERRWTDENIDMVALKHFPNI 2859
Query: 180 YREMAGTDPVF 190
+E A + P+
Sbjct: 2860 DKEKAMSRPIL 2870
>sp|P38650|DYHC1_RAT Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus GN=Dync1h1
PE=1 SV=1
Length = 4644
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 5 GFYSLEKPGEFTTLIDVQFVAAMAQPGG-GRNDIPSRLKRQFCIFNCVLPSDKAIDNIFS 63
GFY + L +QFV A P GR + R R + P ++ I+
Sbjct: 2689 GFYRTSDQT-WVKLERIQFVGACNPPTDPGRKPLSHRFLRHVPVVYVDYPGPASLTQIY- 2746
Query: 64 VIGEGHYNAKRGFPIEVRNLVKQLIPLTRLL--WKSTRAQLLPTPAKFHYVFSLRDLSRI 121
G +N R + +L PLT + + + + + HY++S R+++R
Sbjct: 2747 ----GTFN--RAMLRLIPSLRTYAEPLTAAMVEFYTMSQERFTQDTQPHYIYSPREMTRW 2800
Query: 122 WQGMVGTLSTVIDSEKV--LMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLGVK 179
+G+ L +++ V L+ +W HE R+F DR ++ W D+ + + ++
Sbjct: 2801 VRGIFEALRP-LETLPVEGLIRIWAHEALRLFQDRLVEDEERRWTDENIDMVALKHFPNI 2859
Query: 180 YREMAGTDPVF 190
+E A + P+
Sbjct: 2860 DKEKAMSRPIL 2870
>sp|O13290|DYHC_SCHPO Dynein heavy chain, cytoplasmic OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=dhc1 PE=1 SV=1
Length = 4196
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 14 EFTTLIDVQFVAAMAQPGG--GRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYN 71
E+ T+ ++ FV P GRND P R R+ + P ++ I++ + E
Sbjct: 2624 EWVTIKNI-FVCGACNPSTDIGRNDFPERFLRRTVLIFVDYPESYSLVTIYNALLEKSAL 2682
Query: 72 AKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLST 131
+ I + N+VK + ++L ++ ++ + YV++ RDL+R +
Sbjct: 2683 INQYKTI-ILNIVKASVKFYQVLRENFKS------STQGYVYTPRDLTRWLISFKNYAES 2735
Query: 132 VIDSEKV-LMLLWKHEVTRVFSDRFTIMSDKHWFDDEVLNLVEQNLG 177
++ + L+ +W HE RV DR + W E+ ++ + G
Sbjct: 2736 YAETNNLSLIKVWYHEACRVLLDRLVSQKECSWGMTELQKVIVTDFG 2782
>sp|Q9VFS5|PP4R3_DROME Serine/threonine-protein phosphatase 4 regulatory subunit 3
OS=Drosophila melanogaster GN=flfl PE=1 SV=4
Length = 980
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 27/120 (22%)
Query: 57 AIDNIFSVIGEGHYNAKRGFPIEVRNLVKQL------IPLTRL-----LWKSTRAQ---- 101
A D IF V+G Y+ P + R +KQL +P+ L + ++ R Q
Sbjct: 216 ADDTIFDVVGCLEYDPSVSQPKKHRQYLKQLAKFREAVPIKNLDLLAKIHQTFRVQYIQD 275
Query: 102 -LLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVLMLLWKHEVTRVFSDRFTIMSD 160
+LPTP+ F + M+ TLS+ I KV ++ + R D F +++D
Sbjct: 276 IILPTPSVF-----------VEDNMLNTLSSFIFFNKVEIVTMIQDDERYLLDVFAVLTD 324
>sp|Q8IBG1|DYHC1_PLAF7 Dynein heavy chain-like protein MAL7P1.162 OS=Plasmodium falciparum
(isolate 3D7) GN=MAL7P1.162 PE=2 SV=2
Length = 4985
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 17/152 (11%)
Query: 21 VQFVAAMAQP-GGGRNDIPSRLKRQFCIFNCVLPSDKAIDNIFSVIGEGHYNAK--RGFP 77
+ F A P GRN + +R R + P +++ I+ G +N R FP
Sbjct: 2905 ITFAGACNPPTDAGRNPLSNRFLRHTSVLYVDFPGYESLKQIY-----GTFNRAILRKFP 2959
Query: 78 IE---VRNLVKQLIPLTRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVID 134
NL + ++ ++ + P HY++S R+L+R + TL + +
Sbjct: 2960 QSSHMADNLTQAMVDFYTKFSETFTIDMQP-----HYIYSPRELTRWKLALYETLESCDE 3014
Query: 135 -SEKVLMLLWKHEVTRVFSDRFTIMSDKHWFD 165
K L+ L E R+F DR +K D
Sbjct: 3015 LKTKDLVRLCICEGLRIFQDRLIYKKEKKETD 3046
>sp|P47335|EFG_MYCGE Elongation factor G OS=Mycoplasma genitalium (strain ATCC 33530 /
G-37 / NCTC 10195) GN=fusA PE=3 SV=1
Length = 688
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 91 TRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVLMLLW----KHE 146
T + WK+ L+ TP + + R+ G + L + E +W ++E
Sbjct: 68 TSVSWKNCSLNLIDTPGHVDFTVEVERSLRVLDGAIAVLDAQMGVEPQTETVWRQASRYE 127
Query: 147 VTRVFSDRFTIMSDKHW--FDDEVLNLVEQNLGVK 179
V RV F DK F+ VL+ ++Q LGVK
Sbjct: 128 VPRVI---FVNKMDKTGANFERSVLS-IQQRLGVK 158
>sp|D2HBV9|PORED_AILME Polyprenol reductase OS=Ailuropoda melanoleuca GN=SRD5A3 PE=3 SV=1
Length = 318
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 93 LLWKSTRAQLL--PTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVLMLLWKHEVTRV 150
LLW T++ L P P H + + S+ QG LS + VL+ LW H + R+
Sbjct: 90 LLWHLTQSVFLGVPFPNWLHGLLRILGASQF-QGGELALSAFL----VLVFLWLHSLRRL 144
Query: 151 FSDRFTIMSDKHWFDDEVLNLVEQNLGVKYREMAG 185
F + + F + V+++V+ G+ Y + G
Sbjct: 145 FECFYVSV-----FSNTVIHIVQYCFGLVYYVLTG 174
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 82 NLVKQLIPLTRLLWKST--RAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVL 139
+L K P+T LL + RA+L FH ++DLSR+ + + TL ++D+
Sbjct: 165 SLAKYADPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTL--ILDNSPAS 222
Query: 140 MLLWKHEVTRVFSDRFTIMSDKHWFDD----EVLNLVEQNLGVKYREMAGTDPVFV 191
+ V S WFDD E+LNL+ + E++G + V+
Sbjct: 223 YIFHPENAVPVQS----------WFDDMADTELLNLIP-----IFEELSGAEDVYT 263
>sp|Q9P5N0|ABC3_SCHPO ATP-binding cassette transporter abc3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc3 PE=2 SV=1
Length = 1465
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 49 NCVLPSDKAIDNIFSVIGEGHYNAKRGFPIEVRNLVKQLIPLTRLLWKSTRAQLL----- 103
NC+ + D ++S + EG N G +QLI L R+L STR LL
Sbjct: 1343 NCI---SQLEDGLYSRVAEGGANFSSG--------QRQLICLARVLLTSTRILLLDEATA 1391
Query: 104 ----PTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVLML 141
T A R R + ++TV+DS+++L+L
Sbjct: 1392 SVHAETDAIVQQTIRKRFKDRTILTVAHRINTVMDSDRILVL 1433
>sp|P75544|EFG_MYCPN Elongation factor G OS=Mycoplasma pneumoniae (strain ATCC 29342 /
M129) GN=fusA PE=3 SV=1
Length = 688
Score = 30.0 bits (66), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 91 TRLLWKSTRAQLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTVIDSEKVLMLLW----KHE 146
T + WK+ L+ TP + + R+ G + L + E +W ++E
Sbjct: 68 TSVSWKNCSLNLIDTPGHVDFTVEVERSLRVLDGAIAVLDAQMGVEPQTETVWRQASRYE 127
Query: 147 VTRVFSDRFTIMSDKHWFD-DEVLNLVEQNLGVK 179
V R+ F DK + + + ++Q LGVK
Sbjct: 128 VPRII---FVNKMDKTGANFERSVQSIQQRLGVK 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,337,931
Number of Sequences: 539616
Number of extensions: 2922170
Number of successful extensions: 7820
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7722
Number of HSP's gapped (non-prelim): 75
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)