BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9565
(288 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242013225|ref|XP_002427315.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
gi|212511656|gb|EEB14577.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
Length = 218
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 141/202 (69%), Gaps = 14/202 (6%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVL 143
SS K NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 23 SSSKLQNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 82
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQP--VSTPLEPCRVAPYVNVP--RLPTLPFSASTA 199
+ + + G+I+S+H P VST LEPCRVAPYVNVP RL + +
Sbjct: 83 R-----AKCRKHESQMQKGMIVSSHTPATVSTTLEPCRVAPYVNVPSIRLTSSYNQMQSL 137
Query: 200 AAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLS 259
+ FS FDP L SAA Q AAAA + ++P +F QYP LA LAA+HQDRL S
Sbjct: 138 SGFSTFDPALFSAAAQQYAAAAAAFSSSSSP--LVF--CPQYP-LGLAALAAVHQDRLYS 192
Query: 260 KNSSIADLRLKAKKHAEAIEMA 281
KNSSIADLR KAKKHAEA++M+
Sbjct: 193 KNSSIADLRFKAKKHAEALKMS 214
>gi|328714903|ref|XP_001946558.2| PREDICTED: short stature homeobox protein 2-like [Acyrthosiphon
pisum]
Length = 330
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 140/195 (71%), Gaps = 22/195 (11%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLID 148
SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 146 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 205
Query: 149 VSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFS--ASTAAAFSAFD 206
++ G+++ HQ VSTPLEPCRVAPYVNVPRLP L F+ A+ AAAFSAFD
Sbjct: 206 KHESQMHK-----GLMM--HQNVSTPLEPCRVAPYVNVPRLPQLQFNSSAAAAAAFSAFD 258
Query: 207 PTLLSAAHQ-YAAAAATVAALGNAPNGSIFSAASQYP--SFSLATLAALHQDRLLSKNSS 263
P +L+AA Q + A A L AP YP SLA LAALHQDRLL+KNSS
Sbjct: 259 PAILTAAQQLHYAVAMGRGVLCPAP----------YPPGGLSLAALAALHQDRLLTKNSS 308
Query: 264 IADLRLKAKKHAEAI 278
IADLRLKAKKHAEAI
Sbjct: 309 IADLRLKAKKHAEAI 323
>gi|189234030|ref|XP_967102.2| PREDICTED: similar to CG34367 CG34367-PC [Tribolium castaneum]
Length = 254
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 139/224 (62%), Gaps = 37/224 (16%)
Query: 75 SRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 134
SRH L SS K++ KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA
Sbjct: 44 SRHSVLG--SSGKATTKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 101
Query: 135 RVQNFSQVLNLLIDVSTVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLPTLP 193
RVQ + Q I G++++NH P STPLEPCRV PY+NVP L L
Sbjct: 102 RVQVWFQNRRAKCRKHESQIQK-----GMMMNNHSPSSSTPLEPCRVVPYMNVPALRRLT 156
Query: 194 FSASTAA-----------------AFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFS 236
+ + A AFSAFDP ++AAHQYAAAA V G +P SI
Sbjct: 157 LTPGSVALSNYDRLSSTTFSQPGTAFSAFDPAFITAAHQYAAAAVAV---GGSP-ASIL- 211
Query: 237 AASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
QYP A LAA H KNSSIADLRLKA+KHAEA+ +
Sbjct: 212 CHPQYP-LGFAALAAAH------KNSSIADLRLKARKHAEALGL 248
>gi|195473619|ref|XP_002089090.1| GE26064 [Drosophila yakuba]
gi|194175191|gb|EDW88802.1| GE26064 [Drosophila yakuba]
Length = 420
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 141/267 (52%), Gaps = 70/267 (26%)
Query: 66 SSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREEL 125
S E SRH H P+ S + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREEL
Sbjct: 170 SPEPSRHR--EHCD--PLDSSMVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREEL 225
Query: 126 SQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
SQRLGLSEARVQ + Q N ++ ++ S P++TPLEPCRVAPYV+
Sbjct: 226 SQRLGLSEARVQVWFQNRR----AKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVS 281
Query: 186 VPRL----------------PTLPFSASTAAAFSAF------------------------ 205
+ L P P S T++A
Sbjct: 282 LAALRSSSVPSHPAAASSSNPQAPGSGGTSSAGKVVTVDSSHNHNPAISRSAIKQFSSTV 341
Query: 206 ---------DPTLLS-AAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQD 255
DP ++S AAHQYAAA G+ P G +FS QY S +LA AA H
Sbjct: 342 AAAAAFSAFDPAIISVAAHQYAAAITN----GSVPAG-LFSVP-QY-SINLAAFAAAH-- 392
Query: 256 RLLSKNSSIADLRLKAKKHAEAIEMAA 282
SK+SSIADLR+KAKKH+E++ + A
Sbjct: 393 ---SKSSSIADLRMKAKKHSESLGLQA 416
>gi|194761770|ref|XP_001963098.1| GF14108 [Drosophila ananassae]
gi|190616795|gb|EDV32319.1| GF14108 [Drosophila ananassae]
Length = 387
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 132/239 (55%), Gaps = 63/239 (26%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 161 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 216
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYV--------NVPRLPTLPFSASTAAAF 202
N ++ ++ S P++TPLEPCRVAPYV +VP +P SA AA
Sbjct: 217 CRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRNSSVPPIPPTATSAIPAATG 276
Query: 203 SA--------------------------------------FDPTLLS-AAHQYAAAAATV 223
SA FDP +++ AAHQYAAA
Sbjct: 277 SANSGKVPVVSVDSPHPPAITRSAVKQFSSTVAAAAAFSAFDPAIITVAAHQYAAAITN- 335
Query: 224 AALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
G P G +FS QY S +LA AA H SK+SSIADLR+KAKKH+E++ + A
Sbjct: 336 ---GTVPAG-LFSVP-QY-SINLAAFAAAH-----SKSSSIADLRMKAKKHSESLGLQA 383
>gi|194859821|ref|XP_001969458.1| GG23943 [Drosophila erecta]
gi|190661325|gb|EDV58517.1| GG23943 [Drosophila erecta]
Length = 419
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 139/250 (55%), Gaps = 65/250 (26%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
P+ S + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 182 PLDSSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQ 241
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL------------ 189
N ++ ++ S P++TPLEPCRVAPYV++ L
Sbjct: 242 NRR----AKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAA 297
Query: 190 ----PTLPFSASTAAA--------------------------------FSAFDPTLLS-A 212
P P S T++ FSAFDP ++S A
Sbjct: 298 TSSNPPAPGSGGTSSGKVVPVDSPHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISVA 357
Query: 213 AHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAK 272
AHQYAAA + G+ P G +FS QY S +LA AA H SK+SSIADLR+KAK
Sbjct: 358 AHQYAAAISN----GSVPAG-LFSVP-QY-SINLAAFAAAH-----SKSSSIADLRMKAK 405
Query: 273 KHAEAIEMAA 282
KH+E++ + A
Sbjct: 406 KHSESLGLQA 415
>gi|161076856|ref|NP_001097140.1| CG34367, isoform C [Drosophila melanogaster]
gi|157400139|gb|ABV53663.1| CG34367, isoform C [Drosophila melanogaster]
Length = 420
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 136/251 (54%), Gaps = 66/251 (26%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
P+ + + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 182 PLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQ 241
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNV--------------- 186
N ++ ++ S P++TPLEPCRVAPYV++
Sbjct: 242 NRR----AKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAA 297
Query: 187 ----PRLPTLPFSASTAAAFSA------------------------------FDPTLLS- 211
P+ P + ++S+ + FDP ++S
Sbjct: 298 TSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISV 357
Query: 212 AAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKA 271
AAHQYAAA G P G +FS QY S +LA AA H SK+SSIADLR+KA
Sbjct: 358 AAHQYAAAITN----GTVPAG-LFSVP-QY-SINLAAFAAAH-----SKSSSIADLRMKA 405
Query: 272 KKHAEAIEMAA 282
KKH+E++ + A
Sbjct: 406 KKHSESLGLQA 416
>gi|281364781|ref|NP_001162934.1| CG34367, isoform B [Drosophila melanogaster]
gi|124248424|gb|ABM92832.1| IP17602p [Drosophila melanogaster]
gi|272406982|gb|AAF52920.2| CG34367, isoform B [Drosophila melanogaster]
Length = 297
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 136/251 (54%), Gaps = 66/251 (26%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
P+ + + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 59 PLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQ 118
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNV--------------- 186
N ++ ++ S P++TPLEPCRVAPYV++
Sbjct: 119 NRR----AKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAA 174
Query: 187 ----PRLPTLPFSASTAAAFSA------------------------------FDPTLLS- 211
P+ P + ++S+ + FDP ++S
Sbjct: 175 TSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISV 234
Query: 212 AAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKA 271
AAHQYAAA G P G +FS QY S +LA AA H SK+SSIADLR+KA
Sbjct: 235 AAHQYAAAITN----GTVPAG-LFSVP-QY-SINLAAFAAAH-----SKSSSIADLRMKA 282
Query: 272 KKHAEAIEMAA 282
KKH+E++ + A
Sbjct: 283 KKHSESLGLQA 293
>gi|383863721|ref|XP_003707328.1| PREDICTED: short stature homeobox protein-like [Megachile
rotundata]
Length = 374
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 133/238 (55%), Gaps = 14/238 (5%)
Query: 49 DLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSN----KQRRSRTNFTLEQL 104
+LK N NE ++LP + SR + ++ S+C++ KQRRSRTNFTLEQL
Sbjct: 141 ELKSQNSNEKSTEHKLP--QPSRALVQGQEEVTKGSNCRNGGNGNGKQRRSRTNFTLEQL 198
Query: 105 NELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAGII 164
ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q ++ + G++
Sbjct: 199 AELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHESQLHKGVA-GGMV 257
Query: 165 LSNHQPVSTPLEPCRVAPYVNVPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAAT 222
L+ P T LEPCRVAPY+ RL P + AA SAFDP +L YAAA
Sbjct: 258 LAPRSP-PTSLEPCRVAPYLPALRLHPPMQGAGGNVTAAGSAFDPAVL----HYAAAGGL 312
Query: 223 VAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
P + L+ A+L SKNSSIADLRLKA++H EA+ +
Sbjct: 313 FCLPPPPPPPPPPPTSGHPHPHPLSLAASLAAAAARSKNSSIADLRLKARRHQEALGL 370
>gi|340714415|ref|XP_003395724.1| PREDICTED: short stature homeobox protein 2-like [Bombus
terrestris]
Length = 384
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 137/246 (55%), Gaps = 22/246 (8%)
Query: 49 DLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSN----KQRRSRTNFTLEQL 104
+LK NE S+ S+ SR + + S+C++S KQRRSRTNFTLEQL
Sbjct: 143 ELKSQASNEAKSSDLKLQSQVSRSLMQGQEESTKGSNCRNSGNGNGKQRRSRTNFTLEQL 202
Query: 105 NELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLN----- 159
ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q ++ L
Sbjct: 203 AELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHESQLHKGLAITKRF 262
Query: 160 --PAGIILSNHQPVSTPLEPCRVAPYVNVPRL-PTLPFSAS--TAAAFSAFDPTLLSAAH 214
G++L+ P +T LEPCRVAPY+ RL P + + T AA SAFDP +L
Sbjct: 263 GVAGGMVLAPRSPPAT-LEPCRVAPYLPALRLHPPMQGAGGNMTTAAGSAFDPAVL---- 317
Query: 215 QYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKH 274
+ AAA + L P S+ SLA A R SKNSSIADLRLKA++H
Sbjct: 318 -HYAAAGGLFCLPPPPPPPPTSSHPHPHPLSLAASLAAAAAR--SKNSSIADLRLKARRH 374
Query: 275 AEAIEM 280
EA+ +
Sbjct: 375 QEALGL 380
>gi|350399127|ref|XP_003485430.1| PREDICTED: short stature homeobox protein 2-like [Bombus impatiens]
Length = 384
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 137/246 (55%), Gaps = 22/246 (8%)
Query: 49 DLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSN----KQRRSRTNFTLEQL 104
+LK NE S+ S+ SR + + S+C++S KQRRSRTNFTLEQL
Sbjct: 143 ELKSQASNETKSSDLKLQSQVSRSLMQGQEESTKGSNCRNSGNGNGKQRRSRTNFTLEQL 202
Query: 105 NELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLN----- 159
ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q ++ L
Sbjct: 203 AELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHESQLHKGLAVTKRF 262
Query: 160 --PAGIILSNHQPVSTPLEPCRVAPYVNVPRL-PTLPFSAS--TAAAFSAFDPTLLSAAH 214
G++L+ P +T LEPCRVAPY+ RL P + + T AA SAFDP +L
Sbjct: 263 DVAGGMVLAPRSPPAT-LEPCRVAPYLPALRLHPPMQGAGGNMTTAAGSAFDPAVL---- 317
Query: 215 QYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKH 274
+ AAA + L P S+ SLA A R SKNSSIADLRLKA++H
Sbjct: 318 -HYAAAGGLFCLPPPPPPPPTSSHPHPHPLSLAASLAAAAAR--SKNSSIADLRLKARRH 374
Query: 275 AEAIEM 280
EA+ +
Sbjct: 375 QEALGL 380
>gi|345498243|ref|XP_001606522.2| PREDICTED: hypothetical protein LOC100122913 [Nasonia vitripennis]
Length = 422
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 121/198 (61%), Gaps = 13/198 (6%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI 147
+ KQRRSRTNFTLEQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 229 GNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKC 288
Query: 148 DVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDP 207
++ + G++L+ P T LEPCRVAPY+ RL SA++AA SAFDP
Sbjct: 289 RKHESQLHKGVT-GGMVLAPRSP-PTSLEPCRVAPYLPALRLHPQIQSANSAA--SAFDP 344
Query: 208 TLLSAAHQYAAAAATVAALGNAPN-----GSIFSAASQYPSFSLATLAALHQDRLLSKNS 262
+L YAAA G PN G SA + + A+LAA SK+S
Sbjct: 345 AVL----HYAAAGGLFCLPGGHPNTSSAAGPSGSAGNPHHLNLAASLAAAAAANSRSKSS 400
Query: 263 SIADLRLKAKKHAEAIEM 280
SIADLRLKA++H EA+ +
Sbjct: 401 SIADLRLKARRHQEALGL 418
>gi|328788511|ref|XP_001120111.2| PREDICTED: short stature homeobox protein 2-like [Apis mellifera]
Length = 376
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 126/204 (61%), Gaps = 14/204 (6%)
Query: 84 SSCKSSN----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
S+C++S KQRRSRTNFTLEQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ +
Sbjct: 176 SNCRNSGNGNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVW 235
Query: 140 SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL-PTLPFSAS- 197
Q ++ + G++L+ P +T LEPCRVAPY+ RL P + +
Sbjct: 236 FQNRRAKCRKHESQLHKGVA-GGMVLAPRSPPAT-LEPCRVAPYLPALRLHPPIQGAGGN 293
Query: 198 -TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDR 256
T A SAFDP +L + AAA + L P AAS +P L+ A+L
Sbjct: 294 ITTAPASAFDPAVL-----HYAAAGGLFCLPPPPPPPPPPAASHHPPHPLSLAASLAAAA 348
Query: 257 LLSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA++H EA+ +
Sbjct: 349 ARSKNSSIADLRLKARRHQEALGL 372
>gi|195118670|ref|XP_002003859.1| GI18136 [Drosophila mojavensis]
gi|193914434|gb|EDW13301.1| GI18136 [Drosophila mojavensis]
Length = 459
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 152/292 (52%), Gaps = 83/292 (28%)
Query: 54 NENEC-DDSNRLPSSESSRHHI---SRHLSLSP-------------ISSCKSSNKQRRSR 96
N NEC +DSN S E S H + + +S+SP + S+KQRRSR
Sbjct: 184 NNNECSNDSN---SPELSLHKVVSSEKSISISPEPQSNIGDTNIARMEHSGLSSKQRRSR 240
Query: 97 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINN 156
TNFTLEQLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q N
Sbjct: 241 TNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AKCRKHEN 296
Query: 157 TLNPAGIILSNHQ-PVSTPLEPCRVAPYVN--------------------VP-------- 187
++ GI+LS+ PVSTPLEPCRVAPYVN VP
Sbjct: 297 QMH-KGILLSSRSPPVSTPLEPCRVAPYVNLANIRNTNTTMLPSSNGLCSVPQQTGGKSA 355
Query: 188 -----RLPTLPFSASTAAA------------FSAFDPTLLSAAHQYAAAAATVAALGNAP 230
+ P P S TAAA FSAFDP +LS AAA AA+ N
Sbjct: 356 VNIINKRPPSPISVVTAAAEHFSGSVAAAAAFSAFDPAILS-----AAAHQYAAAINNRS 410
Query: 231 NGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
+ QYP LA AA H KNSSIADLR+KAKKH+E++ + A
Sbjct: 411 RPAGLFPLPQYP-LHLAAFAAAH------KNSSIADLRMKAKKHSESLGLEA 455
>gi|332027708|gb|EGI67776.1| Short stature homeobox protein [Acromyrmex echinatior]
Length = 307
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 125/203 (61%), Gaps = 14/203 (6%)
Query: 84 SSCKSSN----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
SSC+S+ KQRRSRTNFT+EQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ +
Sbjct: 109 SSCRSNGSGNGKQRRSRTNFTIEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVW 168
Query: 140 SQVLNLLIDVSTVTINNTLNPAG-IILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAST 198
Q ++ + AG ++L+ P +T LEPCRVAPY+ RL P +T
Sbjct: 169 FQNRRAKCRKHESQLHKGV--AGSMVLAPRSPPTT-LEPCRVAPYLPALRLHPSPMQGTT 225
Query: 199 -AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL 257
SAFDP +L + AAA + L P + ++ +P L+ A+L
Sbjct: 226 NVTVGSAFDPAVL-----HYAAAGGLFCLPPPPPPPPPAPSAGHPPHPLSLAASLAAAAA 280
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA++H EA+ +
Sbjct: 281 RSKNSSIADLRLKARRHQEALGL 303
>gi|307177466|gb|EFN66593.1| Short stature homeobox protein 2 [Camponotus floridanus]
Length = 196
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 120/197 (60%), Gaps = 13/197 (6%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI 147
+ KQRRSRTNFT+EQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 5 GNGKQRRSRTNFTIEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKC 64
Query: 148 DVSTVTINNTLNPAG-IILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAF---S 203
++ + AG ++L+ P +T LEPCRVAPY+ RL P + AA+ S
Sbjct: 65 RKHESQLHKGV--AGSMVLAPRSPPTT-LEPCRVAPYLPALRLHPPPMQGTGAASVTVGS 121
Query: 204 AFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSS 263
AFDP +L YAAA P + ++ +P L+ A+L SKNSS
Sbjct: 122 AFDPAVL----HYAAAGGLFCL--PPPPPPPSAPSAGHPPHPLSLAASLAAAAARSKNSS 175
Query: 264 IADLRLKAKKHAEAIEM 280
IADLRLKA++H EA+ +
Sbjct: 176 IADLRLKARRHQEALGL 192
>gi|380025331|ref|XP_003696428.1| PREDICTED: retinal homeobox protein Rx2-like [Apis florea]
Length = 392
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 117/193 (60%), Gaps = 12/193 (6%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 205 KQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 264
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL-PTLPFSAS--TAAAFSAFDP 207
++ + G++L+ P +T LEPCRVAPY+ RL P + + T A SAFDP
Sbjct: 265 ESQLHKGVA-GGMVLAPRSPPAT-LEPCRVAPYLPALRLHPPIQGAGGNITTAPASAFDP 322
Query: 208 TLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADL 267
+L + AAA + L P ++ SLA A R SKNSSIADL
Sbjct: 323 AVL-----HYAAAGGLFCLPPPPPPPPATSHHPPHPLSLAASLAAAAAR--SKNSSIADL 375
Query: 268 RLKAKKHAEAIEM 280
RLKA++H EA+ +
Sbjct: 376 RLKARRHQEALGL 388
>gi|322788141|gb|EFZ13923.1| hypothetical protein SINV_02746 [Solenopsis invicta]
Length = 401
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 120/204 (58%), Gaps = 15/204 (7%)
Query: 84 SSCKSSN----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
S+C+S+ KQRRSRTNFT+EQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ +
Sbjct: 202 SNCRSNGSGNGKQRRSRTNFTIEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVW 261
Query: 140 SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL--PTLPFSAS 197
Q ++ + ++L+ P +T LEPCRVAPY+ RL P L +A
Sbjct: 262 FQNRRAKCRKHESQLHKGVA-GSMVLAPRSPPTT-LEPCRVAPYLPALRLHPPPLQGTAV 319
Query: 198 T-AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDR 256
T SAFDP +L YAAA P SA SLA A R
Sbjct: 320 TNVTVGSAFDPAVL----HYAAAGGLFCLPPPPPPPPAPSAGHPPHPLSLAASLAAAAAR 375
Query: 257 LLSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA++H EA+ +
Sbjct: 376 --SKNSSIADLRLKARRHQEALGL 397
>gi|405964577|gb|EKC30046.1| Short stature homeobox protein [Crassostrea gigas]
Length = 274
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 107/198 (54%), Gaps = 49/198 (24%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 161
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVP-------RLPT----LPFSA--S 197
+ + AG+++ Q TPL+ CR+ PYV +P RLP LP+ + +
Sbjct: 162 CRKQESQMQKAGLLI---QAQGTPLDACRMTPYVTMPPIREPVERLPPISPFLPYYSLHN 218
Query: 198 TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL 257
A P LL H YAAA A+LH L
Sbjct: 219 PGHAHQPIHPLLL-YHHHYAAA---------------------------LNYASLHDTSL 250
Query: 258 LS-KNSSIADLRLKAKKH 274
S KNSSIADLRLKA++H
Sbjct: 251 KSNKNSSIADLRLKARQH 268
>gi|410909870|ref|XP_003968413.1| PREDICTED: short stature homeobox protein 2-like isoform 1
[Takifugu rubripes]
Length = 289
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 113/203 (55%), Gaps = 35/203 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 109 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 164
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + +Q E CRVAPYVNV L +PF+ A L
Sbjct: 165 CRKQENQLHKGVLIGAANQ-----FEACRVAPYVNVGAL-RMPFTQVQAQ-------LQL 211
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSL-------------ATLAALHQDRL 257
+A +A +AP +F A P F L + +AA +
Sbjct: 212 DSAVAHAQHHLHSHLAAHAPY-MMFPA----PPFGLPLASLAADSVSAASVVAAAAAAKN 266
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHAEA+ +
Sbjct: 267 TSKNSSIADLRLKAKKHAEALGL 289
>gi|363737425|ref|XP_003641845.1| PREDICTED: short stature homeobox protein 2-like [Gallus gallus]
Length = 346
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 109/204 (53%), Gaps = 24/204 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 153 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 208
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF ++ +
Sbjct: 209 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQASVLVGCGVRGRVA 262
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPS----FSLATLA----------ALHQDR 256
Q +A A + + +P+ LATLA A +
Sbjct: 263 QVQAQLQLDSAVAHAHHHLHPHLAHAPYMMFPAPPFGLPLATLAESASAASVVAAAAAAK 322
Query: 257 LLSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 323 TTSKNSSIADLRLKAKKHAAALGL 346
>gi|410909872|ref|XP_003968414.1| PREDICTED: short stature homeobox protein 2-like isoform 2
[Takifugu rubripes]
Length = 301
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 115/208 (55%), Gaps = 33/208 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 109 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 164
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTL- 209
N L+ +I + +Q E CRVAPYVNV L +PF+ + F +
Sbjct: 165 CRKQENQLHKGVLIGAANQ-----FEACRVAPYVNVGAL-RMPFTQDSHCNVPPFSFQVQ 218
Query: 210 ----LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSL-------------ATLAAL 252
L +A +A +AP +F A P F L + +AA
Sbjct: 219 AQLQLDSAVAHAQHHLHSHLAAHAPY-MMFPA----PPFGLPLASLAADSVSAASVVAAA 273
Query: 253 HQDRLLSKNSSIADLRLKAKKHAEAIEM 280
+ SKNSSIADLRLKAKKHAEA+ +
Sbjct: 274 AAAKNTSKNSSIADLRLKAKKHAEALGL 301
>gi|357625509|gb|EHJ75931.1| hypothetical protein KGM_15249 [Danaus plexippus]
Length = 285
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 107/197 (54%), Gaps = 35/197 (17%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVL 143
S S KQRRSRTNFTLEQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 83 GSISSGGKQRRSRTNFTLEQLGELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 142
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSA------- 196
++ L G TPLEPCRVAPYV+VPRL + A
Sbjct: 143 RAKCRKHESQMHKGLLVGG--------SGTPLEPCRVAPYVSVPRLSSTTQRAPPPLPLT 194
Query: 197 --STAAAFSAFDPTLLSAAHQYAAAAATVAALGN-APNGSIFSAASQYPSFSLATLAALH 253
AF+ FD +LSAA A+AA AA P P LA LAA
Sbjct: 195 PHPPPTAFAPFDSAMLSAAAHQYASAAAAAAAAALCP-----------PYAGLAALAA-- 241
Query: 254 QDRLLSKNSSIADLRLK 270
++SSIADLRLK
Sbjct: 242 ----RCRSSSIADLRLK 254
>gi|187608131|ref|NP_001119883.1| short stature homeobox protein isoform 1 [Danio rerio]
Length = 285
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 114/195 (58%), Gaps = 14/195 (7%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLL 146
+S KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 104 QSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR-- 161
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAF 205
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A
Sbjct: 162 --AKCRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQLQLEGV 213
Query: 206 DPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIA 265
H + AA A P G ++ + S + A +AA + SKNSSIA
Sbjct: 214 GTHSHPHLHPHLAAHAPYLMFPPPPFGLPIASLADSASAAAAVVAAAKSN---SKNSSIA 270
Query: 266 DLRLKAKKHAEAIEM 280
DLRLKA+KHAEA+ +
Sbjct: 271 DLRLKARKHAEALGL 285
>gi|18202029|sp|O35750.2|SHOX2_RAT RecName: Full=Short stature homeobox protein 2; AltName:
Full=Paired family homeodomain protein Prx3
Length = 237
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 114/208 (54%), Gaps = 33/208 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 45 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 100
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAS-----TAAAFSAF 205
N L+ G+++ ++ E CRVAPYVNV L +PF T +F
Sbjct: 101 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 154
Query: 206 DPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AAL 252
L +A + A + P +F A P F LATL AA
Sbjct: 155 AHVQLDSAVRAAHHHLHPHLAAHGPY-MMFPA----PPFGLPLATLAADSASAASVVAAA 209
Query: 253 HQDRLLSKNSSIADLRLKAKKHAEAIEM 280
+ SKNSSIADLRLKAKKHA A+ +
Sbjct: 210 AAAKTTSKNSSIADLRLKAKKHAAALGL 237
>gi|6981534|ref|NP_037160.1| short stature homeobox protein 2 [Rattus norvegicus]
gi|2632117|emb|CAA05284.1| Prx3A'' [Rattus norvegicus]
Length = 233
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 114/208 (54%), Gaps = 33/208 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 41 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 96
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAS-----TAAAFSAF 205
N L+ G+++ ++ E CRVAPYVNV L +PF T +F
Sbjct: 97 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 150
Query: 206 DPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AAL 252
L +A + A + P +F A P F LATL AA
Sbjct: 151 AHVQLDSAVRAAHHHLHPHLAAHGPY-MMFPA----PPFGLPLATLAADSASAASVVAAA 205
Query: 253 HQDRLLSKNSSIADLRLKAKKHAEAIEM 280
+ SKNSSIADLRLKAKKHA A+ +
Sbjct: 206 AAAKTTSKNSSIADLRLKAKKHAAALGL 233
>gi|348528190|ref|XP_003451601.1| PREDICTED: short stature homeobox protein-like isoform 2
[Oreochromis niloticus]
Length = 293
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 111/205 (54%), Gaps = 32/205 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 161
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL + +PL+ CRVAPYVN+ L +PF F +
Sbjct: 162 CRKQENQMH-KGVILGS----GSPLDACRVAPYVNMGAL-RMPFQ-QVGHVF------IF 208
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQY-----PSFSL----------ATLAALHQD 255
Q T +A + +A + Y P F L A A
Sbjct: 209 VVQAQLQLEGVTHSAHSHPHLHPHLAAHAPYLMFPPPPFGLPIASLADSASAAAAVAAAA 268
Query: 256 RLLSKNSSIADLRLKAKKHAEAIEM 280
+ SKNSSIADLRLKA+KH EA+ +
Sbjct: 269 KSNSKNSSIADLRLKARKHTEALGL 293
>gi|301615106|ref|XP_002937019.1| PREDICTED: short stature homeobox protein-like [Xenopus (Silurana)
tropicalis]
Length = 290
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 110/200 (55%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 114 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 169
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL + LE CRVAPYVN+ L +PF A +
Sbjct: 170 CRKQENQMH-KGVILG----TGSHLETCRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 221
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSL--ATLAALHQDRLL--------SK 260
+ H + AA L P P F L A+LA + SK
Sbjct: 222 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLADTASAAAVVAAAAKSNSK 270
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 271 NSSIADLRLKARKHAEALGL 290
>gi|348528188|ref|XP_003451600.1| PREDICTED: short stature homeobox protein-like isoform 1
[Oreochromis niloticus]
Length = 285
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 110/205 (53%), Gaps = 40/205 (19%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 161
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL + +PL+ CRVAPYVN+ L +PF A
Sbjct: 162 CRKQENQMH-KGVILGS----GSPLDACRVAPYVNMGAL-RMPFQQVQA----------- 204
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQY-----PSFSL----------ATLAALHQD 255
Q T +A + +A + Y P F L A A
Sbjct: 205 ----QLQLEGVTHSAHSHPHLHPHLAAHAPYLMFPPPPFGLPIASLADSASAAAAVAAAA 260
Query: 256 RLLSKNSSIADLRLKAKKHAEAIEM 280
+ SKNSSIADLRLKA+KH EA+ +
Sbjct: 261 KSNSKNSSIADLRLKARKHTEALGL 285
>gi|440895775|gb|ELR47885.1| Short stature homeobox protein 2, partial [Bos grunniens mutus]
Length = 291
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 111/210 (52%), Gaps = 34/210 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 96 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 151
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF ++ A P
Sbjct: 152 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQASTAHHCNVTPLSF 205
Query: 211 SAAHQYAAAAATVAALGNAPNGS-------IFSAASQYPSFS--LATL-----------A 250
Q +A A + +F A P F LATL A
Sbjct: 206 QVQAQLQLDSAVAHAHHHLHPHLAAHAPYMMFPA----PPFGLPLATLAADSASAASVVA 261
Query: 251 ALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
A + SKNSSIADLRLKAKKHA A+ +
Sbjct: 262 AAAAAKTTSKNSSIADLRLKAKKHAAALGL 291
>gi|395753638|ref|XP_003779635.1| PREDICTED: short stature homeobox protein isoform 2 [Pongo abelii]
Length = 306
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 112/207 (54%), Gaps = 33/207 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL +NH L+ CRVAPYVN+ L +PF S + A + P
Sbjct: 172 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGAL-RMPFQQSPSCALTPPGPL 223
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQY-----PSFSLATLAALHQDRLL----- 258
L A A + +A + Y P F L +
Sbjct: 224 LQVQAQLQLEGVAHAHPHLHPHL----AAHAPYLMFPPPPFGLPIASLAESASAAAVVAA 279
Query: 259 -----SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 280 AAKSNSKNSSIADLRLKARKHAEALGL 306
>gi|2632115|emb|CAA05283.1| Prx3A [Rattus norvegicus]
Length = 221
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 112/203 (55%), Gaps = 35/203 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 41 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 96
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF A L
Sbjct: 97 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAH-------VQL 143
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+A + A + P +F A P F LATL AA +
Sbjct: 144 DSAVRAAHHHLHPHLAAHGPY-MMFPA----PPFGLPLATLAADSASAASVVAAAAAAKT 198
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 199 TSKNSSIADLRLKAKKHAAALGL 221
>gi|395527040|ref|XP_003765660.1| PREDICTED: short stature homeobox protein isoform 2 [Sarcophilus
harrisii]
Length = 303
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 106/202 (52%), Gaps = 26/202 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVP--RLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL ++ L+ CRVAPYVN+ R+P S T +FS
Sbjct: 172 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGALRMPFQQESLCTTPSFSQVQAQ 226
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL---------- 258
L Q A L P F L +
Sbjct: 227 L-----QLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSN 281
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 282 SKNSSIADLRLKARKHAEALGL 303
>gi|157278223|ref|NP_001098211.1| Medaka OG-12 [Oryzias latipes]
gi|2959596|gb|AAC05613.1| Medaka OG-12 [Oryzias latipes]
Length = 282
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 108/200 (54%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 161
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL + + L+ CRVAPYVN+ L +PF A D
Sbjct: 162 CRKQENQMH-KGVILGS----GSHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLDGVTH 213
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLAT----------LAALHQDRLLSK 260
+ H + AA L P P F L T A + SK
Sbjct: 214 THPHLHPHLAAHAPYLMFPP-----------PPFGLPTASLADSASAAAAVAAAAKSNSK 262
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KH EA+ +
Sbjct: 263 NSSIADLRLKARKHTEALGL 282
>gi|410896362|ref|XP_003961668.1| PREDICTED: short stature homeobox protein-like isoform 1 [Takifugu
rubripes]
Length = 282
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 111/200 (55%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 161
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL + + L+ CRVAPYVN+ L +PF A D
Sbjct: 162 CRKQENQMH-KGVILGS----GSHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLDGVTH 213
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSL----------ATLAALHQDRLLSK 260
S H + AA L P P F L A AA+ + SK
Sbjct: 214 SHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLADSASAAAAAVAAAKSNSK 262
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 263 NSSIADLRLKARKHAEALGL 282
>gi|2632119|emb|CAA05285.1| Prx3B [Rattus norvegicus]
Length = 215
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 112/203 (55%), Gaps = 35/203 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 35 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 90
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF A L
Sbjct: 91 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAH-------VQL 137
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+A + A + P +F A P F LATL AA +
Sbjct: 138 DSAVRAAHHHLHGHLAAHGPY-MMFPA----PPFGLPLATLAADSASAASVVAAAAAAKT 192
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 193 TSKNSSIADLRLKAKKHAAALGL 215
>gi|348526712|ref|XP_003450863.1| PREDICTED: short stature homeobox protein 2-like isoform 1
[Oreochromis niloticus]
Length = 289
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 110/203 (54%), Gaps = 35/203 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 109 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 164
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + +Q E CRVAPYVNV L +PF A L
Sbjct: 165 CRKQENQLHKGVLIGAANQ-----FEACRVAPYVNVGAL-RMPFQQVQAQ-------LQL 211
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATLAALHQDRLL---------- 258
+A +A +AP +F A P F LATLAA
Sbjct: 212 DSAVAHAQHHLHSHLAAHAPY-MMFPA----PPFGLPLATLAAESASAASVVAAAAAAKN 266
Query: 259 -SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKH A+ +
Sbjct: 267 TSKNSSIADLRLKAKKHTAALGL 289
>gi|334347460|ref|XP_001371410.2| PREDICTED: short stature homeobox protein 2-like [Monodelphis
domestica]
Length = 360
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 110/208 (52%), Gaps = 32/208 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 167 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 222
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAS-----TAAAFSAF 205
N L+ +I + Q E CRVAPYVNV L +PF T +F
Sbjct: 223 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 276
Query: 206 DPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AAL 252
L +A A L +F A P F LATL AA
Sbjct: 277 AQLQLDSAVAAHAHHHLHPHLAAHAPYMMFPA----PPFGLPLATLAAESASAASVVAAA 332
Query: 253 HQDRLLSKNSSIADLRLKAKKHAEAIEM 280
+ SKNSSIADLRLKAKKHA A+ +
Sbjct: 333 AAAKTTSKNSSIADLRLKAKKHAAALGL 360
>gi|300796730|ref|NP_001178475.1| short stature homeobox protein [Bos taurus]
gi|296490337|tpg|DAA32450.1| TPA: short stature homeobox-like isoform 2 [Bos taurus]
Length = 306
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 106/200 (53%), Gaps = 21/200 (10%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 118 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 177
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
++N+ +IL ++ L+ CRVAPYVN+ L +PF +A P +
Sbjct: 178 ENQMHNS-----VILG----TASHLDACRVAPYVNMGAL-RMPFQQVARPDCAALPPQ-V 226
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
A Q A L P F L + SK
Sbjct: 227 QAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSK 286
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 287 NSSIADLRLKARKHAEALGL 306
>gi|410896364|ref|XP_003961669.1| PREDICTED: short stature homeobox protein-like isoform 2 [Takifugu
rubripes]
Length = 294
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 114/202 (56%), Gaps = 25/202 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 161
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL + + L+ CRVAPYVN+ L +PF A A D +
Sbjct: 162 CRKQENQMH-KGVILGS----GSHLDACRVAPYVNMGAL-RMPFQQVGHAIVLAAD---V 212
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQY--PSFSL----------ATLAALHQDRLL 258
Q T + P+ + + + P F L A AA+ +
Sbjct: 213 RVQAQLQLDGVTHSHPHLHPHLAAHAPYLMFPPPPFGLPIASLADSASAAAAAVAAAKSN 272
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 273 SKNSSIADLRLKARKHAEALGL 294
>gi|348526714|ref|XP_003450864.1| PREDICTED: short stature homeobox protein 2-like isoform 2
[Oreochromis niloticus]
Length = 301
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 112/208 (53%), Gaps = 33/208 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 109 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 164
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTL- 209
N L+ +I + +Q E CRVAPYVNV L +PF + F +
Sbjct: 165 CRKQENQLHKGVLIGAANQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVPPFSFQVQ 218
Query: 210 ----LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATLAALHQDRLL----- 258
L +A +A +AP +F A P F LATLAA
Sbjct: 219 AQLQLDSAVAHAQHHLHSHLAAHAPY-MMFPA----PPFGLPLATLAAESASAASVVAAA 273
Query: 259 ------SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKH A+ +
Sbjct: 274 AAAKNTSKNSSIADLRLKAKKHTAALGL 301
>gi|345317149|ref|XP_001507913.2| PREDICTED: short stature homeobox protein 2-like [Ornithorhynchus
anatinus]
Length = 506
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 314 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 369
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 370 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 423
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 424 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAAESASAASVVAAAAAAKT 483
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 484 TSKNSSIADLRLKAKKHAAALGL 506
>gi|149048355|gb|EDM00931.1| short stature homeobox 2, isoform CRA_b [Rattus norvegicus]
Length = 319
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 248
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 249 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 308
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 309 KAKKHAAALGL 319
>gi|395842773|ref|XP_003794186.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Otolemur
garnettii]
Length = 316
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 136 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 191
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 192 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 245
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 246 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 305
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 306 KAKKHAAALGL 316
>gi|348581191|ref|XP_003476361.1| PREDICTED: short stature homeobox protein 2-like isoform 2 [Cavia
porcellus]
Length = 320
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 140 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 195
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 196 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 249
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 250 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 309
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 310 KAKKHAAALGL 320
>gi|296491161|tpg|DAA33234.1| TPA: short stature homeobox 2-like isoform 3 [Bos taurus]
Length = 319
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 248
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 249 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 308
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 309 KAKKHAAALGL 319
>gi|426342664|ref|XP_004037956.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 319
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 248
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 249 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 308
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 309 KAKKHAAALGL 319
>gi|254750649|ref|NP_001157150.1| short stature homeobox protein 2 isoform c [Homo sapiens]
gi|332818202|ref|XP_003310112.1| PREDICTED: short stature homeobox protein 2 [Pan troglodytes]
Length = 319
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 248
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 249 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 308
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 309 KAKKHAAALGL 319
>gi|18996777|gb|AAL83210.1|AF465939_1 paired-like homeodomain transcription factor Shox [Branchiostoma
floridae]
Length = 286
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 110/204 (53%), Gaps = 34/204 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 103 KQRRSRTNFTLEQLQELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 158
Query: 151 TVTINNTLNPAGIIL------------SNHQPV--STPLEPCRVAPYVNVPRLPTLPFSA 196
N L G +L S H + + L+ CRVAPY+N+ + +PF
Sbjct: 159 CRKQENQLQKGGDMLCSALRGNLTTRVSAHTGMMMGSNLDTCRVAPYMNMGTV-RMPFE- 216
Query: 197 STAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDR 256
A FD +AAH A + + AP S S + +L
Sbjct: 217 -RVQAHLQFD----AAAH-----APHPSMMLYAPAPYALPITSMAGSLAAGSLEVTKN-- 264
Query: 257 LLSKNSSIADLRLKAKKHAEAIEM 280
SKN+SIADLRLKA+KHAEA+ +
Sbjct: 265 --SKNNSIADLRLKARKHAEALGL 286
>gi|359322630|ref|XP_003639881.1| PREDICTED: short stature homeobox protein 2 [Canis lupus
familiaris]
Length = 319
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 248
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 249 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 308
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 309 KAKKHAAALGL 319
>gi|296227720|ref|XP_002759506.1| PREDICTED: short stature homeobox protein 2 isoform 3 [Callithrix
jacchus]
Length = 319
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 248
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 249 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 308
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 309 KAKKHAAALGL 319
>gi|348581189|ref|XP_003476360.1| PREDICTED: short stature homeobox protein 2-like isoform 1 [Cavia
porcellus]
Length = 332
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 140 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 195
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 196 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 249
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 250 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 309
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 310 TSKNSSIADLRLKAKKHAAALGL 332
>gi|395842775|ref|XP_003794187.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Otolemur
garnettii]
Length = 328
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 136 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 191
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 192 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 245
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 246 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 305
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 306 TSKNSSIADLRLKAKKHAAALGL 328
>gi|296491159|tpg|DAA33232.1| TPA: short stature homeobox 2-like isoform 1 [Bos taurus]
Length = 331
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|89145413|ref|NP_006875.2| short stature homeobox protein 2 isoform a [Homo sapiens]
gi|109048538|ref|XP_001102416.1| PREDICTED: hypothetical protein LOC704327 isoform 2 [Macaca
mulatta]
gi|410037685|ref|XP_003950270.1| PREDICTED: short stature homeobox protein 2 [Pan troglodytes]
gi|145559528|sp|O60902.4|SHOX2_HUMAN RecName: Full=Short stature homeobox protein 2; AltName:
Full=Homeobox protein Og12X; AltName:
Full=Paired-related homeobox protein SHOT
gi|119599101|gb|EAW78695.1| hCG1786841, isoform CRA_a [Homo sapiens]
Length = 331
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|426342668|ref|XP_004037958.1| PREDICTED: short stature homeobox protein 2 isoform 3 [Gorilla
gorilla gorilla]
Length = 331
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|343403798|ref|NP_001230281.1| short stature homeobox 2 [Sus scrofa]
Length = 321
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 141 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 196
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ +I + Q E CRVAPYVNV L +PF A +
Sbjct: 197 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 250
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 251 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 310
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 311 KAKKHAAALGL 321
>gi|296227718|ref|XP_002759505.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Callithrix
jacchus]
Length = 331
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|359322628|ref|XP_542854.4| PREDICTED: short stature homeobox protein 2 isoform 1 [Canis lupus
familiaris]
Length = 331
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|149048354|gb|EDM00930.1| short stature homeobox 2, isoform CRA_a [Rattus norvegicus]
Length = 331
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|7305489|ref|NP_038693.1| short stature homeobox protein 2 [Mus musculus]
gi|18202340|sp|P70390.1|SHOX2_MOUSE RecName: Full=Short stature homeobox protein 2; AltName:
Full=Homeobox protein Og12X; Short=OG-12; AltName:
Full=Paired family homeodomain protein Prx3
gi|1616758|gb|AAC52833.1| OG-12a homeodomain protein [Mus musculus]
gi|148683581|gb|EDL15528.1| short stature homeobox 2, isoform CRA_a [Mus musculus]
gi|225000966|gb|AAI72634.1| Short stature homeobox 2 [synthetic construct]
Length = 331
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 248
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 249 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 308
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 309 TSKNSSIADLRLKAKKHAAALGL 331
>gi|329664954|ref|NP_001192456.1| short stature homeobox protein 2 [Bos taurus]
gi|296491160|tpg|DAA33233.1| TPA: short stature homeobox 2-like isoform 2 [Bos taurus]
Length = 358
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 166 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 221
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 222 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 275
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 276 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 335
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 336 TSKNSSIADLRLKAKKHAAALGL 358
>gi|148683582|gb|EDL15529.1| short stature homeobox 2, isoform CRA_b [Mus musculus]
Length = 206
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 26 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 81
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ G+++ ++ E CRVAPYVNV L +PF A +
Sbjct: 82 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 135
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 136 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 195
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 196 KAKKHAAALGL 206
>gi|74203026|dbj|BAE26214.1| unnamed protein product [Mus musculus]
Length = 222
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 42 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 97
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ G+++ ++ E CRVAPYVNV L +PF A +
Sbjct: 98 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 151
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 152 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 211
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 212 KAKKHAAALGL 222
>gi|403265984|ref|XP_003925185.1| PREDICTED: short stature homeobox protein 2 [Saimiri boliviensis
boliviensis]
Length = 301
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 105/203 (51%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 109 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 164
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 165 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 218
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL +
Sbjct: 219 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASXXXXAAAAKT 278
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 279 TSKNSSIADLRLKAKKHAAALGL 301
>gi|1616755|gb|AAC52831.1| OG-12b homeodomain protein, partial [Mus musculus]
Length = 198
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 18 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 73
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ G+++ ++ E CRVAPYVNV L +PF A +
Sbjct: 74 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 127
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 128 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 187
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 188 KAKKHAAALGL 198
>gi|426342666|ref|XP_004037957.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 355
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 163 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 218
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 219 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 272
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 273 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 332
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 333 TSKNSSIADLRLKAKKHAAALGL 355
>gi|395840473|ref|XP_003793082.1| PREDICTED: short stature homeobox protein [Otolemur garnettii]
Length = 289
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 113 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 168
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 169 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 220
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 221 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 269
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 270 NSSIADLRLKARKHAEALGL 289
>gi|1616756|gb|AAC52832.1| OG-12a homeodomain protein, partial [Mus musculus]
Length = 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 109/203 (53%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 18 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 73
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF + + +
Sbjct: 74 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 127
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 128 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 187
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 188 TSKNSSIADLRLKAKKHAAALGL 210
>gi|311275890|ref|XP_003134961.1| PREDICTED: short stature homeobox protein-like isoform 1 [Sus
scrofa]
Length = 300
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 106/200 (53%), Gaps = 25/200 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF S A S +
Sbjct: 172 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQS-AMCLS----RQV 220
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
A Q A L P F L + SK
Sbjct: 221 QAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSK 280
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 281 NSSIADLRLKARKHAEALGL 300
>gi|109048534|ref|XP_001102324.1| PREDICTED: hypothetical protein LOC704327 isoform 1 [Macaca
mulatta]
gi|402861120|ref|XP_003894953.1| PREDICTED: short stature homeobox protein 2 [Papio anubis]
Length = 355
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 163 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 218
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 219 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 272
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 273 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 332
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 333 TSKNSSIADLRLKAKKHAAALGL 355
>gi|344308172|ref|XP_003422752.1| PREDICTED: short stature homeobox protein-like [Loxodonta africana]
Length = 291
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 115 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 170
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 171 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 222
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 223 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 271
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 272 NSSIADLRLKARKHAEALGL 291
>gi|426219373|ref|XP_004003900.1| PREDICTED: short stature homeobox protein 2 [Ovis aries]
Length = 321
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 129 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 184
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 185 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 238
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 239 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 298
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 299 TSKNSSIADLRLKAKKHAAALGL 321
>gi|254750647|ref|NP_003021.3| short stature homeobox protein 2 isoform b [Homo sapiens]
gi|114590047|ref|XP_001153180.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Pan
troglodytes]
gi|397521199|ref|XP_003830686.1| PREDICTED: short stature homeobox protein 2 [Pan paniscus]
gi|14250720|gb|AAH08829.1| SHOX2 protein [Homo sapiens]
gi|119599103|gb|EAW78697.1| hCG1786841, isoform CRA_c [Homo sapiens]
gi|313882574|gb|ADR82773.1| short stature homeobox 2 [synthetic construct]
Length = 355
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 163 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 218
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 219 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 272
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 273 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 332
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 333 TSKNSSIADLRLKAKKHAAALGL 355
>gi|410988018|ref|XP_004000286.1| PREDICTED: short stature homeobox protein isoform 1 [Felis catus]
Length = 293
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 117 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 172
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 173 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 224
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 225 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 273
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 274 NSSIADLRLKARKHAEALGL 293
>gi|410971112|ref|XP_003992017.1| PREDICTED: short stature homeobox protein 2-like [Felis catus]
Length = 233
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 109/203 (53%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 41 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 96
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF + + +
Sbjct: 97 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 150
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 151 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 210
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 211 TSKNSSIADLRLKAKKHAAALGL 233
>gi|2995252|emb|CAA05341.1| homeobox protein SHOTa [Homo sapiens]
Length = 251
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 115/208 (55%), Gaps = 33/208 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 59 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 114
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF + + P +
Sbjct: 115 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPL-PFQV 167
Query: 211 SAAHQYAAAAATVAALGNAPNGS-----IFSAASQYPSFS--LATL-----------AAL 252
A Q +A A + + +F A P F LATL AA
Sbjct: 168 QAQLQLDSAVAHAHHHLHPHLAAHAPYMMFPA----PPFGLPLATLAADSASAASVVAAA 223
Query: 253 HQDRLLSKNSSIADLRLKAKKHAEAIEM 280
+ SK+SSIADLRLKAKKHA A+ +
Sbjct: 224 AAAKTTSKDSSIADLRLKAKKHAAALGL 251
>gi|296227716|ref|XP_002759504.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Callithrix
jacchus]
Length = 357
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 165 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 220
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 221 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 274
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 275 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 334
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 335 TSKNSSIADLRLKAKKHAAALGL 357
>gi|410988020|ref|XP_004000287.1| PREDICTED: short stature homeobox protein isoform 2 [Felis catus]
Length = 306
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 130 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 185
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 186 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 237
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 238 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 286
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 287 NSSIADLRLKARKHAEALGL 306
>gi|297672370|ref|XP_002814274.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Pongo
abelii]
Length = 353
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 109/203 (53%), Gaps = 35/203 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 173 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 228
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF A D +
Sbjct: 229 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQVQAQL--QLDSAVA 280
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
A H A A +F A P F LATL AA +
Sbjct: 281 HAHHHLHPHLAAHAPY------MMFPA----PPFGLPLATLAADSASAASVVAAAAAAKT 330
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 331 TSKNSSIADLRLKAKKHAAALGL 353
>gi|297709290|ref|XP_002831369.1| PREDICTED: short stature homeobox protein isoform 1 [Pongo abelii]
Length = 292
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 108/202 (53%), Gaps = 37/202 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL +NH L+ CRVAPYVN+ L +PF A +
Sbjct: 172 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGV 221
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL---------- 258
+ H + AA L P P F L +
Sbjct: 222 AHAHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSN 270
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 271 SKNSSIADLRLKARKHAEALGL 292
>gi|4506943|ref|NP_000442.1| short stature homeobox protein isoform SHOXa [Homo sapiens]
gi|426394997|ref|XP_004063767.1| PREDICTED: short stature homeobox protein [Gorilla gorilla gorilla]
gi|6831676|sp|O15266.1|SHOX_HUMAN RecName: Full=Short stature homeobox protein; AltName:
Full=Pseudoautosomal homeobox-containing osteogenic
protein; AltName: Full=Short stature homeobox-containing
protein
gi|2463203|emb|CAA72299.1| SHOXa protein [Homo sapiens]
gi|3176736|gb|AAC18820.1| pseudoautosomal homeodomain-containing protein [Homo sapiens]
gi|119587220|gb|EAW66816.1| short stature homeobox, isoform CRA_b [Homo sapiens]
gi|119587221|gb|EAW66817.1| short stature homeobox, isoform CRA_b [Homo sapiens]
Length = 292
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 108/202 (53%), Gaps = 37/202 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL +NH L+ CRVAPYVN+ L +PF A +
Sbjct: 172 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGV 221
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL---------- 258
+ H + AA L P P F L +
Sbjct: 222 AHAHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSN 270
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 271 SKNSSIADLRLKARKHAEALGL 292
>gi|291400068|ref|XP_002716329.1| PREDICTED: short stature homeobox 2-like [Oryctolagus cuniculus]
Length = 238
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 109/203 (53%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 46 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 101
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF + + +
Sbjct: 102 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 155
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 156 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 215
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 216 TSKNSSIADLRLKAKKHAAALGL 238
>gi|224043036|ref|XP_002198003.1| PREDICTED: short stature homeobox protein [Taeniopygia guttata]
Length = 291
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 115 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 170
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 171 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 222
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 223 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 271
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 272 NSSIADLRLKARKHAEALGL 291
>gi|395527038|ref|XP_003765659.1| PREDICTED: short stature homeobox protein isoform 1 [Sarcophilus
harrisii]
Length = 292
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 172 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 223
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 224 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 272
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 273 NSSIADLRLKARKHAEALGL 292
>gi|119331074|ref|NP_001073192.1| short stature homeobox protein [Gallus gallus]
gi|110559938|gb|ABG76207.1| Shox [Gallus gallus]
Length = 291
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 115 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 170
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 171 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 222
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 223 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 271
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 272 NSSIADLRLKARKHAEALGL 291
>gi|402912573|ref|XP_003918830.1| PREDICTED: short stature homeobox protein-like [Papio anubis]
Length = 294
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 108/202 (53%), Gaps = 37/202 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 118 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 173
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL +NH L+ CRVAPYVN+ L +PF A +
Sbjct: 174 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGV 223
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL---------- 258
+ H + AA L P P F L +
Sbjct: 224 AHAHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSN 272
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 273 SKNSSIADLRLKARKHAEALGL 294
>gi|126337096|ref|XP_001362385.1| PREDICTED: short stature homeobox protein-like isoform 1
[Monodelphis domestica]
Length = 292
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 172 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 223
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 224 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 272
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 273 NSSIADLRLKARKHAEALGL 292
>gi|41055202|ref|NP_957490.1| short stature homeobox protein 2 [Danio rerio]
gi|33604130|gb|AAH56324.1| Short stature homeobox 2 [Danio rerio]
gi|40807143|gb|AAH65345.1| Short stature homeobox 2 [Danio rerio]
Length = 299
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 128/256 (50%), Gaps = 55/256 (21%)
Query: 43 FTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLE 102
TD N+D+K E+ C P + ++ I KQRRSRTNFTLE
Sbjct: 81 LTDGNTDMKERKED-CK-----PLEDETQTKI----------------KQRRSRTNFTLE 118
Query: 103 QLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAG 162
QLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q N L+
Sbjct: 119 QLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AKCRKQENQLHKGV 174
Query: 163 IILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTL-----LSAAHQYA 217
+I + Q E CRVAPYVNV L +PF + F + L +A +A
Sbjct: 175 LIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVPPFSFQVQAQLQLDSAVAHA 228
Query: 218 AAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRLLSKNSSI 264
+AP +F A P F LATL AA + +KNSSI
Sbjct: 229 HHHLHSHLAAHAPY-MMFPA----PPFGLPLATLAAESASAASVVAAAAAAKTTNKNSSI 283
Query: 265 ADLRLKAKKHAEAIEM 280
ADLRLKAKKHA A+ +
Sbjct: 284 ADLRLKAKKHAAALGL 299
>gi|311275888|ref|XP_003134962.1| PREDICTED: short stature homeobox protein-like isoform 2 [Sus
scrofa]
Length = 292
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 172 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 223
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 224 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 272
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 273 NSSIADLRLKARKHAEALGL 292
>gi|441633602|ref|XP_004092982.1| PREDICTED: LOW QUALITY PROTEIN: short stature homeobox protein 2,
partial [Nomascus leucogenys]
Length = 308
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 172 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 225
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 226 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 285
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 286 TSKNSSIADLRLKAKKHAAALGL 308
>gi|1519542|gb|AAC52834.1| OG12b homeodomain protein [Mus musculus]
gi|2979680|gb|AAC39662.1| homeodomain protein [Homo sapiens]
gi|119599102|gb|EAW78696.1| hCG1786841, isoform CRA_b [Homo sapiens]
gi|119599104|gb|EAW78698.1| hCG1786841, isoform CRA_b [Homo sapiens]
gi|149048356|gb|EDM00932.1| short stature homeobox 2, isoform CRA_c [Rattus norvegicus]
gi|193787827|dbj|BAG53030.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 10 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 65
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ G+++ ++ E CRVAPYVNV L +PF A +
Sbjct: 66 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 119
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SKNSSIADLRL
Sbjct: 120 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRL 179
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 180 KAKKHAAALGL 190
>gi|327268134|ref|XP_003218853.1| PREDICTED: short stature homeobox protein-like [Anolis
carolinensis]
Length = 308
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 132 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 187
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 188 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVTH 239
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 240 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLADSASAAAVVAAAAKSNSK 288
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 289 NSSIADLRLKARKHAEALGL 308
>gi|297672368|ref|XP_002814273.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Pongo
abelii]
Length = 365
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 173 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 228
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 229 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 282
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
+ +A A L P F LATL AA +
Sbjct: 283 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKT 342
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 343 TSKNSSIADLRLKAKKHAAALGL 365
>gi|355559914|gb|EHH16642.1| hypothetical protein EGK_11961 [Macaca mulatta]
Length = 367
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 106/203 (52%), Gaps = 33/203 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 185 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 240
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVN P S A D +
Sbjct: 241 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNDSHCNVTPLSFQVQAQLQ-LDSAVA 294
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS--LATL-----------AALHQDRL 257
A H A A +F A P F LATL AA +
Sbjct: 295 HAHHHLHPHLAAHAPY------MMFPA----PPFGLPLATLAADSASAASVVAAAAAAKT 344
Query: 258 LSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 345 TSKNSSIADLRLKAKKHAAALGL 367
>gi|344289010|ref|XP_003416239.1| PREDICTED: short stature homeobox protein 2-like [Loxodonta
africana]
Length = 275
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 99/190 (52%), Gaps = 55/190 (28%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 141 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 196
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ G+++ ++ E CRVAPYVNV L +PF + +
Sbjct: 197 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQDSHCNVTPL----- 245
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLK 270
AAT A + SKNSSIADLRLK
Sbjct: 246 ---------AATDA-------------------------------KTTSKNSSIADLRLK 265
Query: 271 AKKHAEAIEM 280
AKKHA A+ +
Sbjct: 266 AKKHAAALGL 275
>gi|355746939|gb|EHH51553.1| hypothetical protein EGM_10952 [Macaca fascicularis]
Length = 281
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 105/204 (51%), Gaps = 25/204 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 89 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 144
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVNV L +PF + + +
Sbjct: 145 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPFQQDSHCNVTPLSFQVQ 198
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAAL--------------HQDR 256
+ +A A L P F L LA L +
Sbjct: 199 AQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLP-LAPLAADSASAASVVAAAAAAK 257
Query: 257 LLSKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 258 TTSKNSSIADLRLKAKKHAAALGL 281
>gi|154147646|ref|NP_001093694.1| short stature homeobox 2 [Xenopus (Silurana) tropicalis]
gi|110559940|gb|ABG76208.1| Shox2 [Xenopus (Silurana) tropicalis]
Length = 311
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 107/202 (52%), Gaps = 21/202 (10%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 119 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 174
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL------------PTLPFSAST 198
N L+ +I + Q E CRVAPYVNV L P+L F
Sbjct: 175 CRKQENQLHKGVLIGAGSQ-----FEACRVAPYVNVGALRMPFQQDSHCNVPSLSFQVQA 229
Query: 199 AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL 258
+ H + A A P G + + + + + +AA +
Sbjct: 230 QLQLDSAVAHAHHHLHPHLTAHAPYMMFPAPPFGLPLATLAAETATAASVVAAAAAAKTS 289
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 290 SKNSSIADLRLKAKKHAAALGL 311
>gi|126337098|ref|XP_001362463.1| PREDICTED: short stature homeobox protein-like isoform 2
[Monodelphis domestica]
Length = 311
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 111/217 (51%), Gaps = 48/217 (22%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVP--RLP---------------TLP 193
N ++ G+IL ++ L+ CRVAPYVN+ R+P T P
Sbjct: 172 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGALRMPFQQDIHYFSYPIPCSTTP 226
Query: 194 FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALH 253
FS+ A + + H + AA L P P F L +
Sbjct: 227 FSSQVQAQLQ-LEGVAHAHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAE 274
Query: 254 QDRLL----------SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 275 SASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL 311
>gi|296490338|tpg|DAA32451.1| TPA: short stature homeobox-like isoform 1 [Bos taurus]
Length = 294
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 107/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 118 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 177
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
++N+ +IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 178 ENQMHNS-----VILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 225
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 226 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 274
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 275 NSSIADLRLKARKHAEALGL 294
>gi|2980872|emb|CAA05342.1| homeobox protein SHOTb [Homo sapiens]
Length = 190
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 10 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 65
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFDPTL 209
N L+ G+++ ++ E CRVAPYVNV L +PF A +
Sbjct: 66 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQVQAQLQLDSAVAHA 119
Query: 210 LSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRL 269
H + AA A P G + + + + + +AA + SK+SSIADLRL
Sbjct: 120 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKDSSIADLRL 179
Query: 270 KAKKHAEAIEM 280
KAKKHA A+ +
Sbjct: 180 KAKKHAAALGL 190
>gi|443707331|gb|ELU02974.1| hypothetical protein CAPTEDRAFT_158069 [Capitella teleta]
Length = 325
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 109/193 (56%), Gaps = 22/193 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL LSEAR+Q + Q
Sbjct: 148 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLALSEARIQVWFQNRRAKCRKQ 207
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
+ G++LS ++ CRVAPYVN+P + DPT
Sbjct: 208 ESQLQK-----GLLLSPT------VDGCRVAPYVNMPSMRMAFDRLHMHHLRHLHDPTAA 256
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQD-----RLLSKNSSIA 265
+ +A AA VAA P+ +F YPS A AL Q+ +KNSSIA
Sbjct: 257 LLSPHPSATAAAVAAAAAMPS-MLF-----YPSPHYAVNLALAQNVGSSVTAQTKNSSIA 310
Query: 266 DLRLKAKKHAEAI 278
DLR+KAKKH+ A+
Sbjct: 311 DLRMKAKKHSAAL 323
>gi|431915191|gb|ELK15878.1| Short stature homeobox protein 2 [Pteropus alecto]
Length = 318
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 136 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 191
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N L+ +I + Q E CRVAPYVN P S A D +
Sbjct: 192 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNDSHCNVTPLSFQVQAQLQ-LDSAVA 245
Query: 211 SAAHQYAAAAATVAA---LGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADL 267
A H A A P G + + + + + +AA + SKNSSIADL
Sbjct: 246 HAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADL 305
Query: 268 RLKAKKHAEAIEM 280
RLKAKKHA A+ +
Sbjct: 306 RLKAKKHAAALGL 318
>gi|71043898|ref|NP_001020793.1| short stature homeobox protein [Canis lupus familiaris]
gi|66876514|gb|AAY58046.1| short stature homeobox isoform a [Canis lupus familiaris]
Length = 291
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 106/200 (53%), Gaps = 33/200 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV + Q
Sbjct: 115 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVHVWFQNRR----AK 170
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A +
Sbjct: 171 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGVAH 222
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL----------SK 260
+ H + AA L P P F L + SK
Sbjct: 223 AHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSNSK 271
Query: 261 NSSIADLRLKAKKHAEAIEM 280
NSSIADLRLKA+KHAEA+ +
Sbjct: 272 NSSIADLRLKARKHAEALGL 291
>gi|48527939|gb|AAT46026.1| short stature homeobox transcript variant SHOXa [Homo sapiens]
Length = 292
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 107/202 (52%), Gaps = 37/202 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFM EELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMHEELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL +NH L+ CRVAPYVN+ L +PF A +
Sbjct: 172 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGAL-RMPFQQVQAQL--QLEGV 221
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL---------- 258
+ H + AA L P P F L +
Sbjct: 222 AHAHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVVAAAAKSN 270
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 271 SKNSSIADLRLKARKHAEALGL 292
>gi|395528272|ref|XP_003766254.1| PREDICTED: short stature homeobox protein 2, partial [Sarcophilus
harrisii]
Length = 269
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 76/115 (66%), Gaps = 10/115 (8%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 59 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 114
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAF 205
N L+ G+++ ++ E CRVAPYVNV L +PF +A S F
Sbjct: 115 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQILVSALSLF 163
>gi|327266940|ref|XP_003218261.1| PREDICTED: short stature homeobox protein 2-like [Anolis
carolinensis]
Length = 167
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 72/104 (69%), Gaps = 10/104 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 49 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 104
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N L+ G+++ ++ E CRVAPYVNV L +PF
Sbjct: 105 CRKQENQLHK-GVLIG----AASQFEACRVAPYVNVGAL-RMPF 142
>gi|77748087|gb|AAI07619.1| Short stature homeobox [Danio rerio]
Length = 258
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 10/113 (8%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLL 146
+S KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 104 QSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR-- 161
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTA 199
N ++ G+IL ++ L+ CRVAPYVN+ L +PF A
Sbjct: 162 --AKCRKQENQMHK-GVILG----TASHLDACRVAPYVNMGAL-RMPFQQVQA 206
>gi|432892225|ref|XP_004075715.1| PREDICTED: short stature homeobox protein 2-like [Oryzias latipes]
Length = 283
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 72/109 (66%), Gaps = 10/109 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 109 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 164
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTA 199
N L+ +I + +Q E CRVAPYVNV L +PF A
Sbjct: 165 CRKQENQLHKGVLIGAANQ-----FEACRVAPYVNVGAL-RMPFQQVQA 207
>gi|6031203|ref|NP_006874.1| short stature homeobox protein isoform SHOXb [Homo sapiens]
gi|2463205|emb|CAA72298.1| SHOXb protein [Homo sapiens]
gi|119587219|gb|EAW66815.1| short stature homeobox, isoform CRA_a [Homo sapiens]
gi|146327474|gb|AAI41504.1| Short stature homeobox [synthetic construct]
gi|151556572|gb|AAI48784.1| Short stature homeobox [synthetic construct]
Length = 225
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 73/106 (68%), Gaps = 14/106 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIILS--NHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N ++ G+IL NH L+ CRVAPYVN+ L +PF
Sbjct: 172 CRKQENQMHK-GVILGTANH------LDACRVAPYVNMGAL-RMPF 209
>gi|449510050|ref|XP_002187171.2| PREDICTED: uncharacterized protein LOC100220753 [Taeniopygia
guttata]
Length = 291
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 75/115 (65%), Gaps = 11/115 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 148 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 203
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVP--RLPTLPFSASTAAAFS 203
N L+ G+++ +T E CRVAPYVNV R+P+ S +S
Sbjct: 204 CRKQENQLH-KGVLIG----AATQFEACRVAPYVNVGALRMPSQQLEWSCTPGWS 253
>gi|449275732|gb|EMC84500.1| Short stature homeobox protein, partial [Columba livia]
Length = 211
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 73/104 (70%), Gaps = 10/104 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 115 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 170
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N ++ G+IL ++ L+ CRVAPYVN+ L +PF
Sbjct: 171 CRKQENQMHK-GVILG----TASHLDACRVAPYVNMGAL-RMPF 208
>gi|397488573|ref|XP_003815333.1| PREDICTED: short stature homeobox protein-like [Pan paniscus]
Length = 218
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 74/106 (69%), Gaps = 14/106 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 171
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N ++ G+IL +NH L+ CRVAPYVN+ L +PF
Sbjct: 172 CRKQENQMHK-GVILGTANH------LDACRVAPYVNMGAL-RMPF 209
>gi|148683583|gb|EDL15530.1| short stature homeobox 2, isoform CRA_c [Mus musculus]
Length = 309
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 72/104 (69%), Gaps = 10/104 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N L+ G+++ ++ E CRVAPYVNV L +PF
Sbjct: 195 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPF 232
>gi|432117247|gb|ELK37677.1| Short stature homeobox protein 2 [Myotis davidii]
Length = 193
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 68/96 (70%), Gaps = 9/96 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 10 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 65
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNV 186
N L+ G+++ ++ E CRVAPYVNV
Sbjct: 66 CRKQENQLHK-GVLIG----AASQFEACRVAPYVNV 96
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKAKKHA A+ +
Sbjct: 172 SKNSSIADLRLKAKKHAAALGL 193
>gi|344251272|gb|EGW07376.1| Short stature homeobox protein 2 [Cricetulus griseus]
Length = 194
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 74/108 (68%), Gaps = 10/108 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 95 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 150
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAST 198
N L+ G+++ ++ E CRVAPYVNV L +PF ++
Sbjct: 151 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPFQQAS 192
>gi|355570187|gb|EHH25603.1| hypothetical protein EGK_21477, partial [Macaca mulatta]
Length = 120
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 74/107 (69%), Gaps = 14/107 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 24 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 79
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFS 195
N ++ G+IL +NH L+ CRVAPYVN+ L +PF
Sbjct: 80 CRKQENQMHK-GVILGTANH------LDACRVAPYVNMGAL-RMPFQ 118
>gi|354493426|ref|XP_003508843.1| PREDICTED: short stature homeobox protein 2-like [Cricetulus
griseus]
Length = 219
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 72/104 (69%), Gaps = 10/104 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 41 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 96
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N L+ G+++ ++ E CRVAPYVNV L +PF
Sbjct: 97 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPF 134
>gi|119599105|gb|EAW78699.1| hCG1786841, isoform CRA_d [Homo sapiens]
Length = 221
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 72/104 (69%), Gaps = 10/104 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 10 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 65
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N L+ G+++ ++ E CRVAPYVNV L +PF
Sbjct: 66 CRKQENQLH-KGVLIG----AASQFEACRVAPYVNVGAL-RMPF 103
>gi|109149547|ref|XP_001112939.1| PREDICTED: short stature homeobox protein-like, partial [Macaca
mulatta]
Length = 213
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 74/106 (69%), Gaps = 14/106 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 118 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 173
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N ++ G+IL +NH L+ CRVAPYVN+ L +PF
Sbjct: 174 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGAL-RMPF 211
>gi|351710455|gb|EHB13374.1| Short stature homeobox protein 2 [Heterocephalus glaber]
Length = 316
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 70/104 (67%), Gaps = 10/104 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 139 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 194
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
N L+ +I + Q E CRVAPYVNV L +PF
Sbjct: 195 CRKQENQLHKGVLIGAASQ-----FEACRVAPYVNVGAL-RMPF 232
>gi|431902728|gb|ELK09016.1| Short stature homeobox protein [Pteropus alecto]
Length = 178
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 70/99 (70%), Gaps = 9/99 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 40 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 95
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
N ++ G+IL ++ L+ CRVAPYVN+ L
Sbjct: 96 CRKQENQMH-KGVILG----TASHLDACRVAPYVNMGAL 129
>gi|291409907|ref|XP_002721242.1| PREDICTED: short stature homeobox-like [Oryctolagus cuniculus]
Length = 392
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 107/192 (55%), Gaps = 23/192 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
+QRRSRTNF+ EQL LERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 222 RQRRSRTNFSAEQLRALERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 277
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G++L +NH LE CRVAPYVN+ L +PF A D
Sbjct: 278 CRKQENQMH-KGVLLGPANH------LEACRVAPYVNMGAL-RMPFQQVQAQL--QLDGV 327
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLR 268
+ H + + P + AA SLA + A S++SSIADLR
Sbjct: 328 GRAHLHPHLLPYLVLPPPPPPPAFGLPVAA------SLAEV-ARGSTSSSSRSSSIADLR 380
Query: 269 LKAKKHAEAIEM 280
LKA+KHAEA+ +
Sbjct: 381 LKARKHAEALGL 392
>gi|260817384|ref|XP_002603567.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
gi|229288886|gb|EEN59578.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
Length = 275
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 100/193 (51%), Gaps = 34/193 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 103 KQRRSRTNFTLEQLQELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AK 158
Query: 151 TVTINNTLNPAGIIL------------SNHQPV--STPLEPCRVAPYVNVPRLPTLPFSA 196
N L G +L S H + + L+ CRVAPY+N+ + +PF
Sbjct: 159 CRKQENQLQKGGDMLCSALRGNLTTRVSAHTGMMMGSNLDTCRVAPYMNMGTV-RMPF-- 215
Query: 197 STAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDR 256
A FD +AAH A + + AP S S + +L
Sbjct: 216 ERVQAHLQFD----AAAH-----APHPSMMLYAPAPYALPITSMAGSLAAGSLEVTKN-- 264
Query: 257 LLSKNSSIADLRL 269
SKN+SIADLRL
Sbjct: 265 --SKNNSIADLRL 275
>gi|403309062|ref|XP_003944949.1| PREDICTED: short stature homeobox protein [Saimiri boliviensis
boliviensis]
Length = 294
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 105/202 (51%), Gaps = 38/202 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRTNFTLEQLNELERLFDETHYPDAFMRE++S+RLG + RVQ + Q
Sbjct: 119 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREKVSRRLGWA-GRVQVWFQNRR----AK 173
Query: 151 TVTINNTLNPAGIIL--SNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
N ++ G+IL +NH L+ CRVAPYVN+ L +PF A +
Sbjct: 174 CRKQENQMH-KGVILGTANH------LDACRVAPYVNMGTL-RMPFQQVQAQL--QLEGV 223
Query: 209 LLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL---------- 258
+ H + AA L P P F L +
Sbjct: 224 AHAHPHLHPHLAAHAPYLMFPP-----------PPFGLPIASLAESASAAAVGAAPPKSN 272
Query: 259 SKNSSIADLRLKAKKHAEAIEM 280
SKNSSIADLRLKA+KHAEA+ +
Sbjct: 273 SKNSSIADLRLKARKHAEALGL 294
>gi|440907435|gb|ELR57586.1| Short stature homeobox protein, partial [Bos grunniens mutus]
Length = 174
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 74/111 (66%), Gaps = 9/111 (8%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV--QNFSQVLNLLID 148
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV QN
Sbjct: 23 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVWFQNRRAKCRKQEK 82
Query: 149 VSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTA 199
+ +L AG+IL ++ L+ CRVAPYVN+ L +PF A
Sbjct: 83 AEGSLLLCSL--AGVILGT----ASHLDACRVAPYVNMGAL-RMPFQQVQA 126
>gi|312381847|gb|EFR27493.1| hypothetical protein AND_05774 [Anopheles darlingi]
Length = 524
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 60/70 (85%)
Query: 72 HHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGL 131
H + H LS ++S ++NKQRRSRTNFTLEQLNELERLF+ETHYPDAFMREELSQRLGL
Sbjct: 422 HLANGHGPLSTLTSNSNANKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGL 481
Query: 132 SEARVQNFSQ 141
SEARVQ + Q
Sbjct: 482 SEARVQVWFQ 491
>gi|270015101|gb|EFA11549.1| short stature homeobox [Tribolium castaneum]
Length = 276
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 58/67 (86%), Gaps = 2/67 (2%)
Query: 75 SRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 134
SRH L SS K++ KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA
Sbjct: 172 SRHSVLG--SSGKATTKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 229
Query: 135 RVQNFSQ 141
RVQ + Q
Sbjct: 230 RVQVWFQ 236
>gi|195050370|ref|XP_001992879.1| GH13518 [Drosophila grimshawi]
gi|193899938|gb|EDV98804.1| GH13518 [Drosophila grimshawi]
Length = 253
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 57/68 (83%), Gaps = 4/68 (5%)
Query: 80 LSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
LS I S S+KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV
Sbjct: 189 LSRIESSGLSSKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV--- 245
Query: 140 SQVLNLLI 147
QV+N +
Sbjct: 246 -QVINYWV 252
>gi|118792018|ref|XP_320090.3| AGAP009293-PA [Anopheles gambiae str. PEST]
gi|116117877|gb|EAA14983.3| AGAP009293-PA [Anopheles gambiae str. PEST]
Length = 476
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 59/70 (84%), Gaps = 4/70 (5%)
Query: 68 ESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQ 127
ES+ H + H LS +S+ NKQRRSRTNFTLEQLNELERLF+ETHYPDAFMREELSQ
Sbjct: 400 ESTAHVANGHGPLSALSN----NKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQ 455
Query: 128 RLGLSEARVQ 137
RLGLSEARVQ
Sbjct: 456 RLGLSEARVQ 465
>gi|198419049|ref|XP_002125254.1| PREDICTED: similar to short stature homeobox [Ciona intestinalis]
Length = 325
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 85/165 (51%), Gaps = 28/165 (16%)
Query: 66 SSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREEL 125
S ++ + +S +S+ S +S+ KQRRSRTNFT+EQLNELERLF+ETHYPDAFMREE+
Sbjct: 119 SKRTTSYDVSDDVSVKSDGSTESAKKQRRSRTNFTMEQLNELERLFEETHYPDAFMREEI 178
Query: 126 SQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
S RL LSE RVQ + Q + + G+ + + P CRVAPY+N
Sbjct: 179 SSRLKLSEGRVQVWFQNRR-----AKCRKQESQMQKGLTMGSSIPG------CRVAPYIN 227
Query: 186 ----------------VPRLPTLPFSASTAAAFSAFDPTLLSAAH 214
+P +P P F+ F P S H
Sbjct: 228 MTSLRATSQQRKQDDVIPPIPMYP-GLIMEGLFNPFLPLPCSTYH 271
>gi|170054320|ref|XP_001863074.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874594|gb|EDS37977.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 172
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/59 (83%), Positives = 55/59 (93%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
++S ++NKQRRSRTNFTLEQLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 64 LASSLANNKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQ 122
>gi|195146802|ref|XP_002014373.1| GL18986 [Drosophila persimilis]
gi|194106326|gb|EDW28369.1| GL18986 [Drosophila persimilis]
Length = 228
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 51/54 (94%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
SS +NKQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 172 SSMVCTNKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQ 225
>gi|296238182|ref|XP_002764056.1| PREDICTED: short stature homeobox protein-like, partial [Callithrix
jacchus]
Length = 259
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 118 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 164
>gi|195385090|ref|XP_002051241.1| GJ14877 [Drosophila virilis]
gi|194147698|gb|EDW63396.1| GJ14877 [Drosophila virilis]
Length = 265
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 5/68 (7%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLID 148
S+KQRRSRTNFTLEQLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ +N+ I
Sbjct: 195 SSKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQ-----VNIYIL 249
Query: 149 VSTVTINN 156
T+ +N
Sbjct: 250 KKTIITSN 257
>gi|444724600|gb|ELW65202.1| Short stature homeobox protein 2 [Tupaia chinensis]
Length = 184
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/51 (94%), Positives = 49/51 (96%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 67 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQ 117
>gi|47225067|emb|CAF97482.1| unnamed protein product [Tetraodon nigroviridis]
Length = 322
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 138 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 184
>gi|345330068|ref|XP_001506008.2| PREDICTED: hypothetical protein LOC100074390 [Ornithorhynchus
anatinus]
Length = 277
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/48 (97%), Positives = 47/48 (97%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 66 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQG 113
>gi|441673441|ref|XP_003282768.2| PREDICTED: uncharacterized protein LOC100581365 [Nomascus
leucogenys]
Length = 343
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 191 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 237
>gi|47220142|emb|CAG07283.1| unnamed protein product [Tetraodon nigroviridis]
Length = 162
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 106 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 152
>gi|307209409|gb|EFN86426.1| Short stature homeobox protein 2 [Harpegnathos saltator]
Length = 249
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 53/62 (85%), Gaps = 4/62 (6%)
Query: 84 SSCKSS----NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
SSC+ + KQRRSRTNFT+EQL ELERLFDETHYPDAFMREELSQRLGLSEARVQ +
Sbjct: 144 SSCRGNANGNGKQRRSRTNFTIEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVW 203
Query: 140 SQ 141
Q
Sbjct: 204 FQ 205
>gi|195578151|ref|XP_002078929.1| GD22269 [Drosophila simulans]
gi|194190938|gb|EDX04514.1| GD22269 [Drosophila simulans]
Length = 281
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
P+ S + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 182 PLDSSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQ 237
>gi|195339769|ref|XP_002036489.1| GM11740 [Drosophila sechellia]
gi|194130369|gb|EDW52412.1| GM11740 [Drosophila sechellia]
Length = 281
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
P+ S + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 182 PLDSSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQ 237
>gi|47211731|emb|CAF93310.1| unnamed protein product [Tetraodon nigroviridis]
Length = 67
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ
Sbjct: 19 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 65
>gi|442627232|ref|NP_001260331.1| CG34367, isoform E [Drosophila melanogaster]
gi|440213649|gb|AGB92866.1| CG34367, isoform E [Drosophila melanogaster]
Length = 223
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
P+ + + KQRRSRTNFTL+QLNELERLF+ETHYPDAFMREELSQRLGLSEARVQ+
Sbjct: 59 PLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQD 115
>gi|391326877|ref|XP_003737936.1| PREDICTED: protein gooseberry-neuro-like, partial [Metaseiulus
occidentalis]
Length = 158
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 50/54 (92%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S KQRRSRTNFTLEQLNELE+LFDETHYPDAFMREELSQRLGLSEARVQ + Q
Sbjct: 82 SGVKQRRSRTNFTLEQLNELEKLFDETHYPDAFMREELSQRLGLSEARVQVWFQ 135
>gi|355719296|gb|AES06553.1| short stature homeobox 2 [Mustela putorius furo]
Length = 68
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/44 (100%), Positives = 44/44 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 134
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA
Sbjct: 25 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 68
>gi|321470925|gb|EFX81899.1| hypothetical protein DAPPUDRAFT_34773 [Daphnia pulex]
Length = 67
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 47/51 (92%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RRSRTNFTLEQL ELERLF+ETHYPDA+MREELSQRLGLSEARVQ + Q
Sbjct: 3 KPRRSRTNFTLEQLAELERLFEETHYPDAYMREELSQRLGLSEARVQVWFQ 53
>gi|313221602|emb|CBY36091.1| unnamed protein product [Oikopleura dioica]
Length = 249
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 45 DSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQL 104
D +++ +E +N L S +S HH + +SP S K KQRRSRTNFT+EQ+
Sbjct: 41 DQAQRIRLFRPHEHVPANALDLSPTSIHH--QDAQISPDLS-KDKQKQRRSRTNFTMEQI 97
Query: 105 NELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ LE LF++THYPDAFMREELSQ LGLSEARVQ + Q
Sbjct: 98 HALESLFEQTHYPDAFMREELSQNLGLSEARVQVWFQ 134
>gi|313228402|emb|CBY23553.1| unnamed protein product [Oikopleura dioica]
Length = 280
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
Query: 61 SNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAF 120
+N L S +S HH + +SP S K KQRRSRTNFT+EQ++ LE LF++THYPDAF
Sbjct: 57 ANALDLSPTSIHH--QDAQISPDLS-KDKQKQRRSRTNFTMEQIHALESLFEQTHYPDAF 113
Query: 121 MREELSQRLGLSEARVQNFSQ 141
MREELSQ LGLSEARVQ + Q
Sbjct: 114 MREELSQNLGLSEARVQVWFQ 134
>gi|56694802|gb|AAW23063.1| Shox, partial [Oikopleura dioica]
Length = 249
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
Query: 61 SNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAF 120
+N L S +S HH + +SP S K KQRRSRTNFT+EQ++ LE LF++THYPDAF
Sbjct: 26 ANALDLSPTSIHH--QDAQISPDLS-KDKQKQRRSRTNFTMEQIHALESLFEQTHYPDAF 82
Query: 121 MREELSQRLGLSEARVQNFSQ 141
MREELSQ LGLSEARVQ + Q
Sbjct: 83 MREELSQNLGLSEARVQVWFQ 103
>gi|348561355|ref|XP_003466478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like [Cavia
porcellus]
Length = 424
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ +SQ L
Sbjct: 241 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWSQAL------ 294
Query: 150 STVTINNTL--NPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAA-AFSAFD 206
+ + + +P +L + ++ C VA P PF+ F+A
Sbjct: 295 AQAPLEGLVPRSPCSSVLCS-------VKSCEVARRATCPD----PFAPRPVPRIFAAAP 343
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIAD 266
P+L S +A+T AAL P ++ A + S +LA A DR + SSIA
Sbjct: 344 PSLFSTMAPL-TSASTAAALLRQPTPAVEGAVA---SGALADPATAAADR---RASSIAA 396
Query: 267 LRLKAKKHA 275
LRLKAK+HA
Sbjct: 397 LRLKAKEHA 405
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI--- 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALETVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 148 ------DVSTVTINNTLNPAGIILSNHQPV---STPLEPCRVAPYVNVPRLPTLPFSAST 198
+ + + P G+ L++ PV E + +N P+ PF
Sbjct: 92 ERGASEQEGSKEVMTEVTPPGMNLNSPSPVDQTKNKKESLEIQQSLNRAVAPSGPF---- 147
Query: 199 AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL 258
FS+ P L YA A + VA+L +P S + S S +R
Sbjct: 148 ---FSSCLPGTLLNTTTYAQALSQVASLKGSPLCSC--CVPDHMSLSFLPTYGCQSNR-- 200
Query: 259 SKNSSIADLRLKAKKHAEAIEMAA 282
+S+A LR+KA++H+EA+ +A
Sbjct: 201 --TASVAALRMKAREHSEAVLQSA 222
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 100/218 (45%), Gaps = 46/218 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 209 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 268
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSN----HQPVSTPLEPCRVAPY 183
F Q+ + ST + N A I L N HQ P P R +
Sbjct: 269 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGLPHQ--CQPAWPLRPSAC 326
Query: 184 VNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
++VP P S A++ + F + +H +G GS+F AAS P
Sbjct: 327 LHVPSCPP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPG 372
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 373 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 406
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 99/218 (45%), Gaps = 46/218 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 212 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 271
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSN----HQPVSTPLEPCRVAPY 183
F Q+ + ST + N A I L N HQ P P R
Sbjct: 272 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGLPHQ--CQPACPLRPGAC 329
Query: 184 VNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
++VP P S A++ + F + +H +G GS+F AAS P
Sbjct: 330 LHVPSCPP---PCSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPG 375
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 376 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 409
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 44/217 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 219 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 278
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNH-QPVSTPLEPCRVAPYV 184
F Q+ + ST NP+ I + PVS + PC P
Sbjct: 279 RERFGQIQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGATSPVSACVVPCDPVPTC 338
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P A P + + + + + +G GS+F A P
Sbjct: 339 MSPH---------------AHPPGASAGVSDFLSVSGASSHVGQTHMGSLFGATGLSPGL 383
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K SSIA LR+KAK+H+ AI A
Sbjct: 384 NGYELNS-EPDR---KTSSIAALRMKAKEHSAAISWA 416
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
S K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 208 SKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKW 267
Query: 138 ----NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAP 182
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 268 RKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVP 327
Query: 183 YVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP 242
P S A++ + F + +H +G GS+F AAS P
Sbjct: 328 ACMSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSP 373
Query: 243 SFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 374 GLNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 408
>gi|443703131|gb|ELU00842.1| hypothetical protein CAPTEDRAFT_171492 [Capitella teleta]
Length = 195
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 79 SLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
++P + CK KQRR+RT F +QL LER+F+ THYPDAF+REEL++R+ LSEARVQ
Sbjct: 19 GVTPSTVCKKKQKQRRNRTTFNSQQLAALERVFERTHYPDAFVREELARRVNLSEARVQV 78
Query: 139 FSQ 141
+ Q
Sbjct: 79 WFQ 81
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 110/264 (41%), Gaps = 58/264 (21%)
Query: 42 YFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTL 101
Y T + +KV E +D LPS + S + K+RR+RT FT
Sbjct: 107 YLTVKETGVKVPQERASND---LPSP------------MDKTDSESNKGKKRRNRTTFTS 151
Query: 102 EQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ--------------NFSQVLNLLI 147
QL ELE++F +THYPD + RE+L+ R L+EARVQ F Q+ +
Sbjct: 152 YQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRT 211
Query: 148 DVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAS 197
ST NP+ I + ++P+ C V P +VP +
Sbjct: 212 HFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDSVPSCMSPHAHPH 267
Query: 198 TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL 257
T S F AH +G GS+F +A P + L DR
Sbjct: 268 TTGGVSEFLSVSGPGAH-----------VGQTHMGSLFGSAGISPGINGYDLNG-EPDR- 314
Query: 258 LSKNSSIADLRLKAKKHAEAIEMA 281
K+SSIA LR+KAK+H+ AI A
Sbjct: 315 --KSSSIAALRMKAKEHSAAISWA 336
>gi|190608780|gb|ACE79721.1| paired-box transcription factor 3/7 [Branchiostoma lanceolatum]
Length = 297
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 91/206 (44%), Gaps = 34/206 (16%)
Query: 48 SDLKVNNENECD-DSNRLPSSESSRHHISRHLS----LSPISSCKS------SNKQRRSR 96
SDL++ E+E D +R P H I L S C S KQRRSR
Sbjct: 47 SDLEMEGEDELSIDGDRKP------HSIDGILGEKNGPGDSSDCDSEPDLPLKRKQRRSR 100
Query: 97 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINN 156
T FT EQL+ELE+ F+ THYPD + REEL+QR L+EARVQ + S+
Sbjct: 101 TTFTPEQLDELEKAFERTHYPDIYTREELAQRTKLTEARVQVW---------FSSRRARW 151
Query: 157 TLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQY 216
+ + P+ P Y+ VP P P SA +A P ++ HQ
Sbjct: 152 RKQQGAQQIPSFMPLGYPAPAAGTPTYMPVPE-PAYPTSAQDSATLHRPQPLPPTSIHQ- 209
Query: 217 AAAAATVAALGNAPNGSIFSAASQYP 242
+ AA T + G A S QYP
Sbjct: 210 SGAADTASMYGTA------SKPYQYP 229
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 44/216 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 67 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 126
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I S+ ++P+ C V
Sbjct: 127 RERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWIGGSS---AASPVPGCVVPCDTV 183
Query: 186 VPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
P + P SAS + F + +G A GS+F + P+
Sbjct: 184 TPCMTPHPHSASGVSDF--------------LGVPSPAGHMGQAHMGSLFGGSPGIPAGI 229
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ DR K+SSIA LR+KAK+H+ AI A
Sbjct: 230 NTYDLNMDPDR---KSSSIAALRMKAKEHSAAISWA 262
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 91/217 (41%), Gaps = 45/217 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 190 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 249
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSN-HQPVSTPLEPCRVAPYV 184
F Q+ + ST NP+ I + PV + PC P
Sbjct: 250 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCEPVPSC 309
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P P + ++T +G G +F A PS
Sbjct: 310 MSPHA----------------HPHAAGGVSDFLGVSSTGGHVGQTHVGGLFGTAGIGPSL 353
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 354 NGYELNS-EPDR---KSSSIAALRMKAKEHSAAISWA 386
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 92/217 (42%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 215 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 274
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSN-HQPVSTPLEPCRVAPYV 184
F Q+ + ST NP+ I + PV + PC P
Sbjct: 275 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPAC 334
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P T P S A + F + H +G G +F AA P
Sbjct: 335 MSPH--THP-PGSGAGGVTDFLSVSGAGGH-----------VGQTHMGGLFGAAGLSPGL 380
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 381 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 413
>gi|374277726|gb|AEZ03829.1| otp, partial [Terebratalia transversa]
Length = 302
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 91/189 (48%), Gaps = 22/189 (11%)
Query: 57 ECDDSNRLPSSESSRHHISRHLSLSPISSCKSSN-----------KQRRSRTNFTLEQLN 105
C D P+ +S + + S SPI+S +SN KQ+R RT FT QLN
Sbjct: 27 RCPDQRHRPTQDSD---LDSNPSASPITSHGASNNYVSEIESKDAKQKRHRTRFTPAQLN 83
Query: 106 ELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAGIIL 165
ELER F +THYPD FMREE++ R+GL+E+RVQ + Q T N P ++
Sbjct: 84 ELERSFAKTHYPDIFMREEMALRIGLTESRVQVWFQNRRAKWKKRRKTTNVFRTPGALLP 143
Query: 166 SNHQPVSTPL-EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDP-TLLSAAHQYAAAAATV 223
S+ P + EP + + PR P FS+ +P + + +A + +
Sbjct: 144 SHGFPTFASITEPTGLNSFTTDPRCNWPP----NIHQFSSMNPNSFGTLGSPFATTRSNI 199
Query: 224 AALGNAPNG 232
A+L A NG
Sbjct: 200 ASL--ASNG 206
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 94/219 (42%), Gaps = 49/219 (22%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 210 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 269
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQ---PVSTPLEPCRVAP 182
F Q+ + ST NP+ I SN+ PV + PC P
Sbjct: 270 RERFGQMQQVRTHFSTAYELPLLARAENYAQIQNPSWI--SNNGAASPVPACVVPCDPVP 327
Query: 183 YVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP 242
P P A+ + + + + +G GS+F AA P
Sbjct: 328 ACMSPHA----------------HPPGSGASTDFLSVSGAGSHVGQTHMGSLFGAAGLSP 371
Query: 243 SFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 372 GLNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 406
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q N
Sbjct: 41 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ--NRRAKWR 98
Query: 151 TVTINNTLNPAGII--LSNHQPVS------TPL-------EPCRVAPYVNVPRLPTLPFS 195
T + +P G +S P S +P+ EP + P +N P PF
Sbjct: 99 K-TERGSSDPEGGKEQMSEGTPPSRSINSQSPVDQGRKHKEPLEMQPSINRTVGPGGPFF 157
Query: 196 ASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQD 255
S TLL++A YA A + VA L NG S S +
Sbjct: 158 PSCLPG------TLLNSA-TYAQALSQVATLKG--NGLCSCCVSDPMGLSFLPPYGCQGN 208
Query: 256 RLLSKNSSIADLRLKAKKHAEAIEMAA 282
R +S+A LR+KA++H+EA+ +A
Sbjct: 209 R----TASVAALRMKAREHSEAVLQSA 231
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 56 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 115
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 116 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 175
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P AS+ F + +S A + +G GS+F AAS P
Sbjct: 176 MSPHAHPPGSGASSVTDFLS-----VSGAGSH---------VGQTHMGSLFGAASLSPGL 221
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 222 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 254
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 212 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 271
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 272 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 331
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P S A++ + F + +H +G GS+F AAS P
Sbjct: 332 MSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPGL 377
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 378 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 410
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 212 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 271
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 272 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 331
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P S A++ + F + +H +G GS+F AAS P
Sbjct: 332 MSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPGL 377
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 378 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 410
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 210 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 269
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 270 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 329
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P S A++ + F + +H +G GS+F AAS P
Sbjct: 330 MSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPGL 375
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 376 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 408
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 210 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 269
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 270 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 329
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P S A++ + F + +H +G GS+F AAS P
Sbjct: 330 MSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPGL 375
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 376 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 408
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 210 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 269
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 270 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 329
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P S A++ + F + +H +G GS+F AAS P
Sbjct: 330 MSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPGL 375
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 376 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 408
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 93/217 (42%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 209 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 268
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSN-HQPVSTPLEPCRVAPYV 184
F Q+ + ST NP+ I + PV + PC P
Sbjct: 269 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPAC 328
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P T P S A+ + F + H +G G +F AA P
Sbjct: 329 MSPH--THP-PGSGASGVTDFLSVSGAGGH-----------VGQTHMGGLFGAAGLSPGL 374
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 375 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 407
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 212 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 271
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 272 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 331
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P AS+ F + +S A + +G GS+F AAS P
Sbjct: 332 MSPHAHPPGSGASSVTDFLS-----VSGAGSH---------VGQTHMGSLFGAASLSPGL 377
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 378 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 410
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 212 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 271
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 272 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 331
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P AS+ F + +S A + +G GS+F AAS P
Sbjct: 332 MSPHAHPPGSGASSVTDFLS-----VSGAGSH---------VGQTHMGSLFGAASLSPGL 377
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 378 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 410
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 214 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 273
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 274 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 333
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P S A++ + F + +H +G GS+F AAS P
Sbjct: 334 MSPHAHP---PGSGASSVTDFLSVSGAGSH-----------VGQTHMGSLFGAASLSPGL 379
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 380 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 412
>gi|449277281|gb|EMC85516.1| Short stature homeobox protein 2, partial [Columba livia]
Length = 63
Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/40 (100%), Positives = 40/40 (100%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLG 130
KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLG
Sbjct: 24 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLG 63
>gi|195153964|ref|XP_002017893.1| GL17417 [Drosophila persimilis]
gi|194113689|gb|EDW35732.1| GL17417 [Drosophila persimilis]
Length = 449
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 138 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 197
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 198 RKKTTNVFRTPGALLPSHGLP 218
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
S K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 198 SKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKW 257
Query: 138 ----NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPY 183
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 258 RKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPC 313
Query: 184 VNVPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQY 241
VP P S A++ S F + +H +G GS+F AA
Sbjct: 314 DPVPACMSPHAHPPGSGASSVSDFLSVSGAGSH-----------VGQTHMGSLFGAAGIS 362
Query: 242 PSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P + + DR K SSIA LR+KAK+H+ AI A
Sbjct: 363 PGLNGYEMNG-EPDR---KTSSIAALRMKAKEHSAAISWA 398
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 41/216 (18%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 216 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 275
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 276 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 331
Query: 186 VPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
VP + + A S D +S A + +G GS+F AAS P +
Sbjct: 332 VPACMSPHAHPPGSGASSVTDFLSVSGAGSH---------VGQTHMGSLFGAASLSPGLN 382
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
L DR K SSIA LR+KAK+H+ AI A
Sbjct: 383 GYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 414
>gi|198458260|ref|XP_001360970.2| GA10023 [Drosophila pseudoobscura pseudoobscura]
gi|198136279|gb|EAL25546.2| GA10023 [Drosophila pseudoobscura pseudoobscura]
Length = 447
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 136 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 195
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 196 RKKTTNVFRTPGALLPSHGLP 216
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 96/217 (44%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 225 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 284
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQ---PVSTPLEPCRVAPYV 184
F Q+ + ST + N A I L N+ PV + PC P
Sbjct: 285 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPAC 344
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P + A S D + + + + +G GS+F AAS P
Sbjct: 345 MSPHA-----HPPGSGASSVTD---------FLSVSGAGSHVGQTHMGSLFGAASLSPGL 390
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 391 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 423
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 99/214 (46%), Gaps = 37/214 (17%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 211 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 270
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI----ILSNHQPVSTPLEPCRVAPYVNVP 187
F Q+ + ST + N A I L N+ ++P+ C V P VP
Sbjct: 271 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNG-AASPVPAC-VVPCDPVP 328
Query: 188 RLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLA 247
+ + A S D +S A + +G GS+F AAS P +
Sbjct: 329 ACMSPHAHPPGSGASSVTDFLSVSGAGSH---------VGQTHMGSLFGAASLSPGLNGY 379
Query: 248 TLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
L DR K SSIA LR+KAK+H+ AI A
Sbjct: 380 ELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 409
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 295 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 354
Query: 142 --------VLNL-LIDVSTVTINNTLNPA--GIILSNHQPVSTPLEPCRVAPYVNVPRLP 190
V ++ L D ++ N + P+ G I SN PLE P N L
Sbjct: 355 WRRQEKLEVTSMKLQDSPILSFNRSPQPSTIGTIGSN-----LPLESWLNPPMSNSSPLQ 409
Query: 191 TLP-FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL 249
TLP F AS + S++ P + + A+G P + + + +
Sbjct: 410 TLPGFVASPQSLPSSYTPPPFLNSPPMGHTLQPLGAMGPPPP---YQCGTNF-------V 459
Query: 250 AALHQDRLLSKNSSIADLRLKAKKHAEAI 278
+ + +N+SIA LR+KAK+H ++I
Sbjct: 460 DKFPLEEVDPRNTSIAALRMKAKEHIQSI 488
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 154 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 213
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSN-HQPVSTPLEPCRVAPYV 184
F Q+ + ST NP+ I + PV + PC P
Sbjct: 214 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPAC 273
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P T P S A+ + F + +H +G G +F AA P
Sbjct: 274 MSPH--THP-PGSGASGVTDFLSVSGAGSH-----------VGQTHMGGLFGAAGLSPGL 319
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 320 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 352
>gi|444729623|gb|ELW70034.1| Homeobox protein orthopedia [Tupaia chinensis]
Length = 138
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS-TV 152
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q LN+L DV TV
Sbjct: 53 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQAYEQHLNILADVKETV 112
Query: 153 TINNT 157
T T
Sbjct: 113 TTIET 117
>gi|116007730|ref|NP_001036563.1| orthopedia, isoform C [Drosophila melanogaster]
gi|77403885|gb|ABA81821.1| RE44291p [Drosophila melanogaster]
gi|113194669|gb|ABI31108.1| orthopedia, isoform C [Drosophila melanogaster]
Length = 271
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 11 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 70
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 71 RKKTTNVFRTPGALLPSHGLP 91
>gi|150416759|gb|ABR68849.1| orthopedia [Platynereis dumerilii]
Length = 267
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 51 KQKRHRTRFTPAQLNELERCFAKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKR 110
Query: 151 TVTINNTLNPAGIILSNH-QPVSTPLEPCRV--APYVNVPRLPTL--------PFSASTA 199
T N P ++ S P + C + + ++P + P
Sbjct: 111 KKTTNVFRTPGALLPSTGLSPFGGMNDLCTFPDTRWTGMAQMPQMGGTNLQLGPAGLGGR 170
Query: 200 AAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAA-------------SQYPSFSL 246
+ P +S + ++ +P GS++S+ Q P
Sbjct: 171 QSMQGMGPMSMSGLGNMSGSSMLNGMNSPSPTGSMYSSPYCVTSSCDSQLTNGQGPVSVS 230
Query: 247 ATLAALHQDRL-LSKNSSIADLRLKAKKHAEAI 278
+ +A QD + SSIA LR KA +H ++
Sbjct: 231 SQMACSMQDVGDAWRGSSIASLRRKALEHTVSM 263
>gi|195486718|ref|XP_002091624.1| GE13763 [Drosophila yakuba]
gi|194177725|gb|EDW91336.1| GE13763 [Drosophila yakuba]
Length = 421
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 121 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 180
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 181 RKKTTNVFRTPGALLPSHGLP 201
>gi|195401635|ref|XP_002059418.1| otp [Drosophila virilis]
gi|194142424|gb|EDW58830.1| otp [Drosophila virilis]
Length = 466
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 119 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 178
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 179 RKKTTNVFRTPGALLPSHGLP 199
>gi|195585229|ref|XP_002082392.1| GD25245 [Drosophila simulans]
gi|194194401|gb|EDX07977.1| GD25245 [Drosophila simulans]
Length = 417
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 115 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 174
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 175 RKKTTNVFRTPGALLPSHGLP 195
>gi|194881721|ref|XP_001974970.1| GG20822 [Drosophila erecta]
gi|190658157|gb|EDV55370.1| GG20822 [Drosophila erecta]
Length = 418
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 116 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 175
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 176 RKKTTNVFRTPGALLPSHGLP 196
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 38 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 97
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 98 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 153
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A++ S F + +H +G GS+F AA P
Sbjct: 154 VPACMSPHAHPPGSGASSVSDFLSVSGAGSH-----------VGQTHMGSLFGAAGLSPG 202
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ + DR K SSIA LR+KAK+H+ AI A
Sbjct: 203 LNGYEMNG-EPDR---KTSSIAALRMKAKEHSAAISWA 236
>gi|195029465|ref|XP_001987593.1| GH19876 [Drosophila grimshawi]
gi|193903593|gb|EDW02460.1| GH19876 [Drosophila grimshawi]
Length = 456
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 111 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 170
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 171 RKKTTNVFRTPGALLPSHGLP 191
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 96/218 (44%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 198 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 257
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 258 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 313
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A+ + F + +H +G GS+F AA P
Sbjct: 314 VPACMSPHAHPPGSGASGVTDFLSVSGAGSH-----------VGQTHMGSLFGAAGLSPG 362
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 363 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 396
>gi|194753698|ref|XP_001959147.1| GF12737 [Drosophila ananassae]
gi|190620445|gb|EDV35969.1| GF12737 [Drosophila ananassae]
Length = 440
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 116 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 175
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 176 RKKTTNVFRTPGALLPSHGLP 196
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 95/218 (43%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 207 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 266
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 267 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 322
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A + F + +H +G GS+F AA P
Sbjct: 323 VPACMSPHAHPPGSGAGGVTDFLSVSGAGSH-----------VGQTHVGSLFGAAGLSPG 371
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 372 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 405
>gi|195346232|ref|XP_002039670.1| GM15769 [Drosophila sechellia]
gi|194135019|gb|EDW56535.1| GM15769 [Drosophila sechellia]
Length = 418
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 115 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 174
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 175 RKKTTNVFRTPGALLPSHGLP 195
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 195 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 254
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 255 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 310
Query: 186 VPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
VP + + A S D +S A + +G GS+F AA P +
Sbjct: 311 VPACMSPHAHPPGSGASSVTDFLSVSGAGSH---------VGQTHMGSLFGAAGLSPGLN 361
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
L DR K SSIA LR+KAK+H+ AI A
Sbjct: 362 GYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 393
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 200 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 259
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 260 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 315
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A++ S F + +H +G GS+F AA P
Sbjct: 316 VPACMSPHAHPPGSGASSVSDFLSVSGAGSH-----------VGQTHMGSLFGAAGISPG 364
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ + DR K SSIA LR+KAK+H+ AI A
Sbjct: 365 LNGYEMNG-EPDR---KTSSIAALRMKAKEHSAAISWA 398
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 96/218 (44%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 186 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 245
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 246 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 301
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A+ + F + +H +G GS+F AA P
Sbjct: 302 VPACMSPHAHPPGSGASGVTDFLSVSGAGSH-----------VGQTHMGSLFGAAGLSPG 350
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 351 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 384
>gi|410903784|ref|XP_003965373.1| PREDICTED: homeobox protein orthopedia B-like isoform 2 [Takifugu
rubripes]
Length = 336
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 52/85 (61%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVL 143
S + S KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 110 SGAQQSQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNR 169
Query: 144 NLLIDVSTVTINNTLNPAGIILSNH 168
T N P ++ ++H
Sbjct: 170 RAKWKKRKKTTNVFRAPGTLLPTHH 194
>gi|410903782|ref|XP_003965372.1| PREDICTED: homeobox protein orthopedia B-like isoform 1 [Takifugu
rubripes]
Length = 323
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 52/85 (61%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVL 143
S + S KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 97 SGAQQSQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNR 156
Query: 144 NLLIDVSTVTINNTLNPAGIILSNH 168
T N P ++ ++H
Sbjct: 157 RAKWKKRKKTTNVFRAPGTLLPTHH 181
>gi|195119480|ref|XP_002004259.1| GI19827 [Drosophila mojavensis]
gi|193909327|gb|EDW08194.1| GI19827 [Drosophila mojavensis]
Length = 471
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 125 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK 184
Query: 150 STVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 185 RKKTTNVFRTPGALLPSHGLP 205
>gi|158292557|ref|XP_313975.4| AGAP005099-PA [Anopheles gambiae str. PEST]
gi|157017048|gb|EAA09408.5| AGAP005099-PA [Anopheles gambiae str. PEST]
Length = 276
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLL 146
K KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 16 KHGAKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAK 75
Query: 147 IDVSTVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 76 WKKRKKTTNVFRTPGALLPSHGLP 99
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 223 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 282
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSN-HQPVSTPLEPCRVAPYV 184
F Q+ + ST NP+ I + PV + PC P
Sbjct: 283 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPAC 342
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P T P S A+ + F + +H +G G +F AA P
Sbjct: 343 MSPH--THP-PGSGASGVTDFLSVSGAGSH-----------VGQTHMGGLFGAAGLSPGL 388
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 389 NGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 421
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 120 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 179
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 180 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 235
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A++ S F + +H +G GS+F AA P
Sbjct: 236 VPACMSPHAHPPGSGASSVSDFLSVSGAGSH-----------VGQTHMGSLFGAAGLSPG 284
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ + DR K SSIA LR+KAK+H+ AI A
Sbjct: 285 LNGYEMNG-EPDR---KTSSIAALRMKAKEHSAAISWA 318
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 61/271 (22%)
Query: 27 DDSNRLPSSESSRHLYFTDSNSDLKVN-------NENECDDSNRLPSSESSRHHISRHLS 79
DD NR+P + N+D K + + DDS S ESS H
Sbjct: 67 DDENRVPLT-----------NADAKPTGPASPNRDRDAADDS----SEESSTH------- 104
Query: 80 LSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
+ K+RR+RT FT QL E+ER+F +THYPD +MRE+L+ R L+EARVQ +
Sbjct: 105 -----AAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVW 159
Query: 140 SQ----------VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
Q + + V + +P I + Q T +P + N +
Sbjct: 160 FQNRRAKWRKKERFQQMAGIRQVALG--ADPYDISMGQRQNGYTQAQPTQWTTTTNASCM 217
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL 249
S A+F + + AH Y +A+ + + ++A QY +
Sbjct: 218 A----PQSNPASFMG----VATQAHSYLTSASPPTTNEDTYPSHMTTSAGQY----FPGM 265
Query: 250 AALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
DR + SSIA+LRLKAK+H+ A+ +
Sbjct: 266 PGGDSDR---RTSSIAELRLKAKEHSVAMGL 293
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 96/218 (44%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 409 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 468
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 469 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 524
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A+ + F + +H +G GS+F AA P
Sbjct: 525 VPACMSPHAHPPGSGASGVTDFLSVSGAGSH-----------VGQTHMGSLFGAAGLSPG 573
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 574 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 607
>gi|195455983|ref|XP_002074951.1| GK22877 [Drosophila willistoni]
gi|194171036|gb|EDW85937.1| GK22877 [Drosophila willistoni]
Length = 498
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ
Sbjct: 121 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQ 168
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 13 KKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRR 72
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVST-----PLEPCRVAPYVNVPRLPTLPFSAST 198
++VS++ + +T +P +LS +P S+ LEP AP L TLP
Sbjct: 73 QEKLEVSSIKLQDTSSPPS-LLSFGRPSSSLGSGLQLEPWLSAPITASTSLQTLP----- 126
Query: 199 AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL 258
F A P L + + + ++ +S + A ++Q
Sbjct: 127 --GFMAGSPGLQGTYTPSPPPSMASPLPASFLSSTVLGHSSHLA--HMCPPAPVYQCSAD 182
Query: 259 SKNSSIADLRLKAKKHAEAI 278
+NSSIA LR+KAK+H + +
Sbjct: 183 PRNSSIASLRMKAKEHIQTM 202
>gi|332022452|gb|EGI62760.1| Paired mesoderm homeobox protein 2 [Acromyrmex echinatior]
Length = 249
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 78 LSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
L S SS + + RRSRT F+ +QL LER+F++THYPDAF+REEL+ R+ LSEARVQ
Sbjct: 42 LDCSETSSTAGNRRPRRSRTTFSAQQLAALERVFEKTHYPDAFVREELATRVSLSEARVQ 101
Query: 138 NFSQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLP------T 191
+ Q N ++ ++ G+ + PL P RV+ + P+ P +
Sbjct: 102 VWFQ--NRRAKFRRNERSSAMS-RGVSAGREIETALPLRPIRVS---HPPQHPAESNAES 155
Query: 192 LPFSAST--AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSI 234
P +A+T A +S D + H AAT G A NG +
Sbjct: 156 SPGAATTQVTAQYSYGDYWRTTPQHYAVQTAATAGCHGFAANGGL 200
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 93/216 (43%), Gaps = 44/216 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 177 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 236
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I S+ ++P+ C V
Sbjct: 237 RERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWIGGSS---AASPVPGCVVPCDTV 293
Query: 186 VPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
P + P SAS + F + +G A GS+F +
Sbjct: 294 APCMTPHPHSASGVSDF--------------LGVPSPGGHVGQAHMGSLFGGSPGMAGGI 339
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ DR K+SSIA LR+KAK+H+ AI A
Sbjct: 340 NTYDLNMDPDR---KSSSIAALRMKAKEHSAAISWA 372
>gi|281427378|ref|NP_001163995.1| orthopedia [Tribolium castaneum]
Length = 308
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 60 KQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKR 119
Query: 151 TVTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 120 KKTTNVFRTPGALLPSHGLP 139
>gi|391338532|ref|XP_003743612.1| PREDICTED: uncharacterized protein LOC100897599 [Metaseiulus
occidentalis]
Length = 869
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 84 SSC--KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SSC K S+KQ+R RT FT QL ELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 61 SSCEDKPSSKQKRHRTRFTPAQLQELERSFSKTHYPDIFMREELAMRIGLTESRVQVWFQ 120
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 61/271 (22%)
Query: 27 DDSNRLPSSESSRHLYFTDSNSDLKV-------NNENECDDSNRLPSSESSRHHISRHLS 79
DD NR+P + N+D K + + DDS S ESS H
Sbjct: 67 DDENRVPLT-----------NADPKPAGPASPNRDRDAADDS----SEESSTH------- 104
Query: 80 LSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
+ K+RR+RT FT QL E+ER+F +THYPD +MRE+L+ R L+EARVQ +
Sbjct: 105 -----AAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVW 159
Query: 140 SQ----------VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
Q + + V + +P I + Q T +P + N +
Sbjct: 160 FQNRRAKWRKKERFQQMAGIRQVALG--ADPYDISMGQRQNGYTQAQPTQWTTTTNASCM 217
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL 249
S A+F + + AH Y +A+ + + ++A QY +
Sbjct: 218 A----PQSNPASFMG----VATQAHSYLTSASPPTTNEDTYPSHMTTSAGQY----FPGM 265
Query: 250 AALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
DR + SSIA+LRLKAK+H+ A+ +
Sbjct: 266 PGGDSDR---RTSSIAELRLKAKEHSVAMGL 293
>gi|270010994|gb|EFA07442.1| orthopedia [Tribolium castaneum]
Length = 328
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQN
Sbjct: 48 KQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQN 95
>gi|157122937|ref|XP_001659965.1| orthopedia homeobox protein [Aedes aegypti]
gi|108882965|gb|EAT47190.1| AAEL001695-PA [Aedes aegypti]
Length = 251
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVST 151
Q+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 74 QKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRK 133
Query: 152 VTINNTLNPAGIILSNHQP 170
T N P G++ S+ P
Sbjct: 134 KTTNVFRTPGGLLPSHGLP 152
>gi|72004990|ref|XP_784599.1| PREDICTED: homeobox protein orthopedia-like [Strongylocentrotus
purpuratus]
Length = 365
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 114 KQKRHRTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQVWFQNRRAKWKKR 173
Query: 151 TVTINNTLNPAGIILSNH 168
T N P ++ S+H
Sbjct: 174 KKTTNVFRTPGALLPSHH 191
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 198 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 257
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I + ++P+ C V P
Sbjct: 258 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWI---GNNGAASPVPAC-VVPCDP 313
Query: 186 VPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
VP + + A S D +S A + A GS+F AA P +
Sbjct: 314 VPACMSPHAHPPGSGASSVTDFLSVSGAGGHVAQTHM---------GSLFGAAGLSPGLN 364
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
L DR K SSIA LR+KAK+H+ AI A
Sbjct: 365 GYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 396
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 29/206 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q N
Sbjct: 41 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ--NRRAKWR 98
Query: 151 TVTINNTLNPAGI-ILSNHQPVS------TPL-------EPCRVAPYVNVPRLPTLPFSA 196
+T G +S P S +P+ EP + +N P+ PF
Sbjct: 99 KTERGSTDAEGGKEPMSEGTPPSRSINSQSPVDHGRKQKEPLEMQQSINRTVGPSGPFFP 158
Query: 197 STAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDR 256
S TLL++A YA A + VA L NG S S +R
Sbjct: 159 SCIPG------TLLNSA-TYAQALSQVATLKG--NGLCSCCVSDPMGLSFLPPYGCQGNR 209
Query: 257 LLSKNSSIADLRLKAKKHAEAIEMAA 282
+S+A LR+KA++H+EA+ +A
Sbjct: 210 ----TASVAALRMKAREHSEAVLQSA 231
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 94/218 (43%), Gaps = 45/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 208 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 267
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP I + ++P+ C V P
Sbjct: 268 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPTWI---GNNGAASPVPAC-VVPCDP 323
Query: 186 VPRL--PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
VP P S A++ + F H +G GS+F AA P
Sbjct: 324 VPACMSPHAHPPGSGASSVTDFLSVSGPGGH-----------VGQTHVGSLFGAAGLSPG 372
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 373 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 406
>gi|357627252|gb|EHJ76994.1| orthopedia [Danaus plexippus]
Length = 269
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 40 KQKRHRTRFTPAQLNELERCFTKTHYPDIFMREEIAMRIGLTESRVQVWFQ 90
>gi|432873492|ref|XP_004072243.1| PREDICTED: homeobox protein orthopedia-like isoform 1 [Oryzias
latipes]
Length = 310
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S S KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 90 SQTASQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 147
>gi|432873494|ref|XP_004072244.1| PREDICTED: homeobox protein orthopedia-like isoform 2 [Oryzias
latipes]
Length = 323
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S S KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 103 SQTASQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 160
>gi|307189640|gb|EFN73978.1| Protein gooseberry-neuro [Camponotus floridanus]
Length = 321
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 14/105 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRT FT EQL +LE F YPD + REEL+QR GL+EAR+Q + +
Sbjct: 62 KQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARLRKH 121
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY--VNVPRLPTLP 193
T +I +++ AG+ PL PC+ A + +P++P +P
Sbjct: 122 TGSIAHSV--AGL----------PLTPCQYASHELAQIPQVPQMP 154
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 48/224 (21%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---- 137
P S + K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 167 PDGSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQ 226
Query: 138 ----------NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEP 177
F Q+ + ST NP+ + S+ ++P+
Sbjct: 227 NRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLSGSS---AASPVPG 283
Query: 178 CRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSA 237
C V P + P SAS + F + +G GS+F
Sbjct: 284 CVVPCDTITPCMTPHPHSASGVSDF--------------LGVPSPGGHMGQPHMGSLFGG 329
Query: 238 ASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ ++ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 330 SPGINTYDLN----MDPDR---KSSSIAALRMKAKEHSAAISWA 366
>gi|345485721|ref|XP_001606575.2| PREDICTED: hypothetical protein LOC100122965 [Nasonia vitripennis]
Length = 369
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD F+REE++ R+GL+E+RVQ + Q
Sbjct: 69 KQKRHRTRFTPAQLNELERCFSKTHYPDIFLREEIAMRIGLTESRVQVWFQ 119
>gi|348527190|ref|XP_003451102.1| PREDICTED: homeobox protein orthopedia B-like isoform 2
[Oreochromis niloticus]
Length = 324
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 108 SQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 161
>gi|348527188|ref|XP_003451101.1| PREDICTED: homeobox protein orthopedia B-like isoform 1
[Oreochromis niloticus]
Length = 311
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 95 SQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 148
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 33 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 92
Query: 142 --------VLNL-LIDVSTVTINNT--LNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLP 190
V ++ L D ++ N + P G + SN PLE P + L
Sbjct: 93 WRRQEKLEVTSMKLQDSPILSFNRSPQATPMGPLSSN-----LPLETWLSPPVPSSTALQ 147
Query: 191 TLP-FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPN---GSIFSAASQYPSFSL 246
TLP F AS + ++ P + A + A+G P G+ F ++P
Sbjct: 148 TLPGFVASPQSLPGSYTPPPFLNSPAVTHALQPLGAMGPPPPYQCGATF--VDKFP---- 201
Query: 247 ATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
D +N+SIA LR+KAK+H ++I
Sbjct: 202 -------LDEADPRNTSIAALRMKAKEHIQSI 226
>gi|74190896|dbj|BAE28229.1| unnamed protein product [Mus musculus]
Length = 479
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT+EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTVEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 49/263 (18%)
Query: 48 SDLKVNNENECDDSNRLPSSES----SRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
S L N++++ DS + S E+ S+ S L + S + K+RR+RT FT Q
Sbjct: 78 SALTPNSDHQGMDSGYITSKETAGKGSQDRGSGDLPMDKTESESNKGKKRRNRTTFTSYQ 137
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------------------NF 139
L ELE++F +THYPD + RE+L+ R L+EARVQ +F
Sbjct: 138 LEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHF 197
Query: 140 SQVLNLLIDVSTVTINNTLNPAGII-LSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAST 198
S L + NP+ I PV + PC P + P SA
Sbjct: 198 SSAYELPLLTRAENYAQIQNPSWIGNNGGGSPVPACVVPCDTVSSCMSPH--SHPHSAGG 255
Query: 199 AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL 258
+ F + A +G G +F +A+ P + L DR
Sbjct: 256 VSEF--------------LSVPGPGAHVGQTHMGGLFGSAAMGPGINGYDLNT-EPDR-- 298
Query: 259 SKNSSIADLRLKAKKHAEAIEMA 281
K+SSIA LR+KAK+ + A+ A
Sbjct: 299 -KSSSIAALRMKAKERSAAMSWA 320
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKR 278
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ + N L P G P P P P P+ S ++
Sbjct: 279 AGANQLAAFNHLLPGGF-----PPTGMPTLPTYQLPETT---YPSTTLSQDGSSTLHRPQ 330
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAAS 239
P S+ HQ +A T +A G + N FS+ S
Sbjct: 331 PLPPSSMHQGGLSADTSSAYGLSSNRHTFSSYS 363
>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
Length = 495
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 274
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ + N L P G P P P P + P S +
Sbjct: 275 AGANQLAAFNHLLPGGF-----PPTGMPTLPPYQLPEAS---YPGTTLSQDGGSTVHRPQ 326
Query: 207 PTLLSAAHQYA-AAAATVAALGNAPNGSIFSAASQYP-SFSLATLA 250
P S+ HQ +AA + G APN FS+ YP SF AT A
Sbjct: 327 PLPPSSMHQSGLTSAAESGSYGLAPNRHTFSS---YPESFMNATGA 369
>gi|353229812|emb|CCD75983.1| putative orthopedia homeobox protein [Schistosoma mansoni]
Length = 1097
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+SS + KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 722 LSSSNTCVKQKRHRTRFTPNQLNELERAFSKTHYPDIFMREELALRIGLTESRVQVWFQ 780
>gi|432891029|ref|XP_004075513.1| PREDICTED: paired box protein Pax-3-like [Oryzias latipes]
Length = 495
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL+ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 222 KQRRSRTTFTAEQLDELERAFERTHYPDIYTREELAQRAKLTEARVQVW 270
>gi|348535328|ref|XP_003455153.1| PREDICTED: homeobox protein orthopedia B-like isoform 1
[Oreochromis niloticus]
Length = 325
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKR 165
Query: 151 TVTINNTLNPAGIILSNH 168
T N P ++ ++H
Sbjct: 166 KKTTNVFRAPGTLLPTHH 183
>gi|312375522|gb|EFR22880.1| hypothetical protein AND_14054 [Anopheles darlingi]
Length = 305
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFS 140
++ KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ S
Sbjct: 195 ATTKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQECS 247
>gi|319891032|gb|ADV76083.1| orthopedia [Biston betularia]
Length = 130
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 30 KQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQ 80
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 25/204 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q +
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 151 TVTINNTLNPAGIILSNHQPV-----STPLEPCR-----VAPYVNVPRL--PTLPFSAST 198
++ P + PV +P E R + ++ R PT PF S
Sbjct: 92 ERGASDQEGPKEPMTEVTPPVRNINSPSPAEQTRNKKDTLEAQQSLSRTVGPTGPFFPSC 151
Query: 199 AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL 258
TLL+ A YA A + VA+L P S + SF L T
Sbjct: 152 LPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDAMGLSF-LPTYGCQS----- 198
Query: 259 SKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 NRTASVAALRMKAREHSEAVLQSA 222
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 169 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 228
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGI-------ILSNHQPVSTPLEPCRVAPYV 184
F Q+ + ST + N A I S+ PV + PC
Sbjct: 229 RERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLSGSSSASPVPGCVVPCDTVSSC 288
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
P P SAS + F S A + + + +G NG S
Sbjct: 289 MTPH----PHSASGVSDFLGMPSPGGSMAQTHMGSLFGSSGVGGTINGYDLS-------- 336
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ DR K+SSIA LR+KAK+H+ AI A
Sbjct: 337 -------VEPDR---KSSSIASLRMKAKEHSAAITWA 363
>gi|348535330|ref|XP_003455154.1| PREDICTED: homeobox protein orthopedia B-like isoform 2
[Oreochromis niloticus]
Length = 338
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 119 KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKR 178
Query: 151 TVTINNTLNPAGIILSNH 168
T N P ++ ++H
Sbjct: 179 KKTTNVFRAPGTLLPTHH 196
>gi|328719289|ref|XP_003246719.1| PREDICTED: hypothetical protein LOC100569588 [Acyrthosiphon pisum]
Length = 172
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
NKQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ
Sbjct: 124 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQ 171
>gi|256071933|ref|XP_002572292.1| orthopedia homeobox protein [Schistosoma mansoni]
Length = 687
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+SS + KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 346 LSSSNTCVKQKRHRTRFTPNQLNELERAFSKTHYPDIFMREELALRIGLTESRVQVWFQ 404
>gi|148668013|gb|EDL00430.1| paired box gene 3 [Mus musculus]
Length = 284
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 23 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 71
>gi|405973681|gb|EKC38378.1| Homeobox protein orthopedia [Crassostrea gigas]
Length = 285
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 63 KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKR 122
Query: 151 TVTINNTLNPAGIILSNHQPVSTPL 175
T N P G +L N P TP
Sbjct: 123 KKTTNVFRTP-GALLPN--PGMTPF 144
>gi|2136302|pir||A45452 transcription factor PAX3 - human (fragments)
Length = 326
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 65 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 113
>gi|295389206|gb|ADG03433.1| orthopedia [Nematostella vectensis]
Length = 291
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 89 KQKRHRTRFTPAQLNELERCFARTHYPDVFMREELAARIGLTESRVQVWFQ 139
>gi|555819|gb|AAA80574.1| paired box homeotic protein [Homo sapiens]
Length = 283
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 22 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 70
>gi|119591196|gb|EAW70790.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_b [Homo
sapiens]
Length = 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 69 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 117
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 99/226 (43%), Gaps = 48/226 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI-- 147
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 338 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRK 397
Query: 148 -DVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY----------------VNVPRLP 190
+ + + P LS P+S L+ P+ P LP
Sbjct: 398 REKAGAQTHPPGLPFPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLP 457
Query: 191 TLPFSAS--------------TAAAFSAFDPTLLSAAHQY-------AAAAATVAALGNA 229
P SAS AA F P +S A +A+T AAL
Sbjct: 458 PPPGSASLPPSGAPLGLSTFLGAAVFR--HPAFISPAFGRLFSTMAPLTSASTAAALLRQ 515
Query: 230 PNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHA 275
P ++ A + S +LA A + DR + SSIA LRLKAK+HA
Sbjct: 516 PTPAVEGAVA---SGALADPATVAADR---RASSIAALRLKAKEHA 555
>gi|354505845|ref|XP_003514978.1| PREDICTED: paired box protein Pax-3-like, partial [Cricetulus
griseus]
Length = 288
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 22 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 70
>gi|269784949|ref|NP_001161626.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
gi|268054257|gb|ACY92615.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
Length = 242
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K + KQRRSRT FT QL LE++F+ THYPDAF+REEL++++ LSEARVQ + Q
Sbjct: 94 KKAKKQRRSRTTFTTNQLGALEKVFERTHYPDAFVREELAKKVDLSEARVQVWFQ 148
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 47/217 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 173 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 232
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I S+ ++P+ C V P +
Sbjct: 233 RERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWIGGSS---AASPVPGC-VVPCDS 288
Query: 186 VPR-LPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
V +P P +AS + F + + +G GS+F +
Sbjct: 289 VTSCMPPHPHAASGVSDF--------------LGVPSPGSHMGQTHMGSLFGSPGMGTGI 334
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 335 NGYDL-NMDPDR---KSSSIAALRMKAKEHSAAISWA 367
>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
Length = 835
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|431917932|gb|ELK17161.1| Paired box protein Pax-3 [Pteropus alecto]
Length = 320
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 54 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 102
>gi|156387439|ref|XP_001634211.1| predicted protein [Nematostella vectensis]
gi|156221291|gb|EDO42148.1| predicted protein [Nematostella vectensis]
Length = 365
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 89 KQKRHRTRFTPAQLNELERCFARTHYPDVFMREELAARIGLTESRVQVWFQ 139
>gi|6636097|gb|AAF20054.1|AF178854_1 Pax3-forkhead fusion protein [synthetic construct]
gi|431254|gb|AAC50053.1| PAX3 protein-forkhead transcription factor fusion [Homo sapiens]
Length = 836
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 28/164 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 222 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 281
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAST-----AAA 201
+ + N L P G P P P PY +LP +SA++ +
Sbjct: 282 AGANQLAAFNHLLPGGF-----PPTGMPALP----PY----QLPESSYSAASLGQDGGST 328
Query: 202 FSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
P S+ HQ +AAT A GS + A + S+S
Sbjct: 329 VHRPQPLPPSSMHQGGLSAATADA------GSAYGARHSFSSYS 366
>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
carolinensis]
Length = 461
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 195 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 243
>gi|74837540|sp|Q6SZ65.1|OTP_LYTVA RecName: Full=Homeobox protein orthopedia
gi|38325836|gb|AAR17090.1| orthopedia [Lytechinus variegatus]
Length = 360
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 111 KQKRHRTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQVWFQ 161
>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 502
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 28/164 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 274
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAST-----AAA 201
+ + N L P G P P P PY +LP +SA++ +
Sbjct: 275 AGANQLAAFNHLLPGGF-----PPTGMPALP----PY----QLPESSYSAASLGQDGGST 321
Query: 202 FSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
P S+ HQ +AAT A GS + A + S+S
Sbjct: 322 VHRPQPLPPSSMHQGGLSAATADA------GSAYGARHSFSSYS 359
>gi|170060515|ref|XP_001865837.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878951|gb|EDS42334.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 186
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFS 140
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ+ S
Sbjct: 128 GKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQSKS 178
>gi|221330466|ref|NP_001097388.2| orthopedia, isoform E [Drosophila melanogaster]
gi|229462936|sp|P56672.2|OTP_DROME RecName: Full=Homeobox protein orthopedia
gi|134085567|gb|ABO52842.1| IP17664p [Drosophila melanogaster]
gi|220902308|gb|AAS64751.3| orthopedia, isoform E [Drosophila melanogaster]
Length = 409
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVST 151
Q+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 109 QKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRK 168
Query: 152 VTINNTLNPAGIILSNHQP 170
T N P ++ S+ P
Sbjct: 169 KTTNVFRTPGALLPSHGLP 187
>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
carolinensis]
Length = 461
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 195 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 243
>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 625
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ EQL+ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 188 KQRRSRTTFSAEQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVW 236
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 97/228 (42%), Gaps = 58/228 (25%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 93 KQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQ 152
Query: 145 LLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLP---TLPFSASTAAA 201
+ N L+P G AP V P LP LPF
Sbjct: 153 EKVGPQGHPYNPYLSPGG---------------GGPAPSVVAPSLPNPFNLPFGLRKPFD 197
Query: 202 FSAFD------PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQD 255
+F P+ L + Y + P+ S++ +AS + + LA ++A +
Sbjct: 198 SLSFRYPPHVLPSYLPSPPGYHRGGPALL----PPSVSLYPSASSFQTL-LANISAAQRP 252
Query: 256 RLLS-----------------------KNSSIADLRLKAKKHAEAIEM 280
+L + ++SSIA LRLKA++H +EM
Sbjct: 253 KLPAQEFTTSPPLSPGGSAVTPPDVDRRSSSIASLRLKAREHELRLEM 300
>gi|429836904|dbj|BAM72542.1| paired box 3, partial [Pipistrellus abramus]
Length = 403
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 157 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 205
>gi|224059972|ref|XP_002194011.1| PREDICTED: paired box protein Pax-3 [Taeniopygia guttata]
Length = 529
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 263 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 311
>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
Length = 482
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 264
>gi|338725615|ref|XP_003365174.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 479
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|307177271|gb|EFN66449.1| Protein gooseberry-neuro [Camponotus floridanus]
Length = 337
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 78 LSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
L S SS + + RRSRT F+ +QL LER+F++THYPDAF+REEL+ R+ LSEARVQ
Sbjct: 42 LDCSETSSTSGNRRPRRSRTTFSAQQLAALERVFEKTHYPDAFVREELATRVSLSEARVQ 101
Query: 138 NFSQVLNLL 146
S + L+
Sbjct: 102 KASSSMTLV 110
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 96/205 (46%), Gaps = 27/205 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI--- 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 41 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 100
Query: 148 -------DVSTVTINNTLNPAGIILSNHQPVS---TPLEPCRVAPYVNVPRLPTLPFSAS 197
D I+ P+ I ++ PV EP + +N P PF S
Sbjct: 101 ERGSSDPDGGKEQISEGTPPSRSI-NSQSPVDQSRKQKEPMEMQQNINRTVGPGGPFFPS 159
Query: 198 TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL 257
TLL++A YA A + VA L P S S S +R
Sbjct: 160 CIPG------TLLNSA-TYAQALSQVATLKGNPLCSC--CVSDPMGLSFLPPYGCQGNR- 209
Query: 258 LSKNSSIADLRLKAKKHAEAIEMAA 282
+S+A LR+KA++H+EA+ +A
Sbjct: 210 ---TASVAALRMKAREHSEAVLQSA 231
>gi|327267053|ref|XP_003218317.1| PREDICTED: paired box protein Pax-3-like isoform 1 [Anolis
carolinensis]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|26337003|dbj|BAC32185.1| unnamed protein product [Mus musculus]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|86355079|dbj|BAE78774.1| paired box containing Pax3 [Pelodiscus sinensis]
Length = 418
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 152 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 200
>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
Length = 459
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 193 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 241
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 259 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 307
>gi|45383598|ref|NP_989600.1| paired box 3 [Gallus gallus]
gi|19032358|dbj|BAB85652.1| paired-box transcription factor protein PAX3 [Gallus gallus]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
Length = 506
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 264
>gi|2145076|gb|AAB58415.1| paired-box transcription factor protein [Coturnix coturnix]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 213 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 261
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 38 SRHLYFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSP--ISSCKSS------ 89
S+ ++ DS+ + + NN +S+ + S + +S S SSC +S
Sbjct: 128 SKAIHRKDSDDERQSNNNAGGSESSAGTTGHSMKPSVSNDFSAXSDRPSSCSNSPEDNGK 187
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F+ QL+ELE++F THYPD F REEL+QR+ L+EARVQ + Q
Sbjct: 188 RKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQ 239
>gi|327267057|ref|XP_003218319.1| PREDICTED: paired box protein Pax-3-like isoform 3 [Anolis
carolinensis]
Length = 485
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 267
>gi|31563340|ref|NP_852122.1| paired box protein Pax-3 isoform PAX3 [Homo sapiens]
gi|332246649|ref|XP_003272465.1| PREDICTED: paired box protein Pax-3 isoform 2 [Nomascus leucogenys]
gi|1172022|sp|P23760.2|PAX3_HUMAN RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2
gi|119591199|gb|EAW70793.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
gi|119591201|gb|EAW70795.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|301626102|ref|XP_002942237.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Xenopus
(Silurana) tropicalis]
Length = 523
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 28/164 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 273
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAST-----AAA 201
+ + N L P G P P P PY +LP +SA++ +
Sbjct: 274 AGANQLAAFNHLLPGGF-----PPTGMPALP----PY----QLPESSYSAASLGQDGGST 320
Query: 202 FSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
P S+ HQ +AAT A GS + A + S+S
Sbjct: 321 VHRPQPLPPSSMHQGGLSAATADA------GSAYGARHSFSSYS 358
>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
Length = 292
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 101 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRR 160
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLE--PCRVAPYVNVPRLPTLP-FSASTAA 200
++VS++ + +T P+ ++ + P + L+ P P L +LP F +S+
Sbjct: 161 QEKLEVSSIKLQDT--PSSLLSFSRSPTGSGLQLDPWLSGPITTSASLQSLPGFISSSQG 218
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSK 260
A+ P S + +LG++P+ S S+ +Q +
Sbjct: 219 LPGAYTPPPPSMPSSLPTSLFNSPSLGHSPHLPHIS--------SMCPPPPAYQCSSDPR 270
Query: 261 NSSIADLRLKAKKHAEAI 278
NSSIA LR+KAK+H ++
Sbjct: 271 NSSIASLRMKAKEHIQSF 288
>gi|444512202|gb|ELV10061.1| Paired box protein Pax-3 [Tupaia chinensis]
Length = 458
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 192 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 240
>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|403266763|ref|XP_003925532.1| PREDICTED: paired box protein Pax-3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|399146686|gb|AFP25465.1| paired box 3 [Anas platyrhynchos]
Length = 482
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 264
>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|390464839|ref|XP_003733294.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|344258001|gb|EGW14105.1| Paired box protein Pax-3 [Cricetulus griseus]
Length = 301
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 35 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 83
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 116 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVNLPEVRVQVWFQNRRAK 175
Query: 142 -VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEP----CRVAPYVNVP-----RLPT 191
++V+++ + ++ I+ N P +TP+ P + +++ P L T
Sbjct: 176 WRRQEKLEVTSMKLQDSP----ILSFNRSPQATPIGPLSSSLPLETWLSPPVPSSTALQT 231
Query: 192 LP-FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLA 250
LP F AS + S++ P + A + A+G P + + + +
Sbjct: 232 LPGFVASPQSLPSSYTPPPFLNSPAMTHALQPLGAMGPPPP---YQCGANF-------VD 281
Query: 251 ALHQDRLLSKNSSIADLRLKAKKHAEAI 278
D +N+SIA LRLKAK+H ++I
Sbjct: 282 KFPLDEADPRNTSIAALRLKAKEHIQSI 309
>gi|198427843|ref|XP_002120103.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 510
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT F QL LER+F+ THYPDAF+REEL++R+GLSEARVQ + Q
Sbjct: 329 KQRRTRTTFNSGQLAALERVFERTHYPDAFVREELARRVGLSEARVQVWFQ 379
>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|31563342|ref|NP_852123.1| paired box protein Pax-3 isoform PAX3d [Homo sapiens]
gi|297264992|ref|XP_001107687.2| PREDICTED: paired box protein Pax-3 isoform 8 [Macaca mulatta]
gi|332246647|ref|XP_003272464.1| PREDICTED: paired box protein Pax-3 isoform 1 [Nomascus leucogenys]
gi|410036241|ref|XP_001165390.2| PREDICTED: paired box protein Pax-3 isoform 6 [Pan troglodytes]
gi|426338712|ref|XP_004033318.1| PREDICTED: paired box protein Pax-3 isoform 1 [Gorilla gorilla
gorilla]
gi|72533682|gb|AAI01302.1| Paired box 3 [Homo sapiens]
gi|119591200|gb|EAW70794.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_f [Homo
sapiens]
gi|158255992|dbj|BAF83967.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
Length = 473
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|344268488|ref|XP_003406090.1| PREDICTED: paired box protein Pax-3 isoform 1 [Loxodonta africana]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 99/239 (41%), Gaps = 46/239 (19%)
Query: 5 SQIIKSSTDSNSDLKVNNENECD-DSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNR 63
S+I++ SDL++ E++ D +R P S + N + ++CD
Sbjct: 129 SRILRGKGHKISDLEIEGEDDFSIDGDRKPHSIDG---ILGEKNGP---GDSSDCDSEPD 182
Query: 64 LPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMRE 123
LP + R KQRRSRT FT EQL ELE+ F+ THYPD + RE
Sbjct: 183 LP--------LKR--------------KQRRSRTTFTPEQLEELEKAFERTHYPDIYTRE 220
Query: 124 ELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY 183
EL+QR L+EARVQ + S + + P+ P Y
Sbjct: 221 ELAQRTKLTEARVQ---------VWFSNRRARWRKQQGAQQIPSFMPLGYPAPAAGTPTY 271
Query: 184 VNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP 242
+ VP P P +A +A P ++ HQ AA T + G A S QYP
Sbjct: 272 MPVPE-PAYPANAQDSATLHRPQPLPPTSIHQ-NGAADTASMYGTA------SKPYQYP 322
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 99/239 (41%), Gaps = 46/239 (19%)
Query: 5 SQIIKSSTDSNSDLKVNNENECD-DSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNR 63
S+I++ SDL++ E++ D +R P S + N + ++CD
Sbjct: 129 SRILRGKGHKISDLEIEGEDDFSIDGDRKPHSIDG---ILGEKNGP---GDSSDCDSEPD 182
Query: 64 LPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMRE 123
LP + R KQRRSRT FT EQL ELE+ F+ THYPD + RE
Sbjct: 183 LP--------LKR--------------KQRRSRTTFTPEQLEELEKAFERTHYPDIYTRE 220
Query: 124 ELSQRLGLSEARVQNFSQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY 183
EL+QR L+EARVQ + S + + P+ P Y
Sbjct: 221 ELAQRTKLTEARVQ---------VWFSNRRARWRKQQGAQQIPSFMPLGYPAPAAGTPTY 271
Query: 184 VNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP 242
+ VP P P +A +A P ++ HQ AA T + G A S QYP
Sbjct: 272 MPVPE-PAYPANAQDSATLHRPQPLPPTSIHQ-NGAADTASMYGTA------SKPYQYP 322
>gi|6093634|sp|O76971.1|OTP_PARLI RecName: Full=Homeobox protein orthopedia; AltName:
Full=Orthopedia-related; AltName: Full=PlOtp
gi|3378648|emb|CAA07543.1| orthopedia-related homeobox protein [Paracentrotus lividus]
Length = 364
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 115 KQKRHRTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQVWFQNRRAKWKKR 174
Query: 151 TVTINNTLNPAGIILSNH 168
T N P G +L +H
Sbjct: 175 KKTTNVFRTP-GALLPSH 191
>gi|281371323|ref|NP_446162.1| paired box 3 [Rattus norvegicus]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|332205885|ref|NP_001193747.1| paired box protein Pax-3 [Bos taurus]
gi|296490253|tpg|DAA32366.1| TPA: paired box 3 [Bos taurus]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|226958470|ref|NP_001152992.1| paired box protein Pax-3 isoform b [Mus musculus]
gi|26336973|dbj|BAC32170.1| unnamed protein product [Mus musculus]
gi|28913680|gb|AAH48699.1| Pax3 protein [Mus musculus]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|355750875|gb|EHH55202.1| hypothetical protein EGM_04358 [Macaca fascicularis]
Length = 473
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
Length = 483
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|74837528|sp|Q6SR68.1|OTP_HELTB RecName: Full=Homeobox protein orthopedia
gi|74837529|sp|Q6SR69.1|OTP_HELER RecName: Full=Homeobox protein orthopedia
gi|41350743|gb|AAS00591.1| orthopedia [Heliocidaris erythrogramma]
gi|41350745|gb|AAS00592.1| orthopedia [Heliocidaris tuberculata]
Length = 363
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 113 KQKRHRTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQVWFQNRRAKWKKR 172
Query: 151 TVTINNTLNPAGIILSNH 168
T N P G +L +H
Sbjct: 173 KKTTNVFRTP-GALLPSH 189
>gi|226958472|ref|NP_032807.3| paired box protein Pax-3 isoform a [Mus musculus]
gi|60416408|sp|P24610.2|PAX3_MOUSE RecName: Full=Paired box protein Pax-3
gi|12852118|dbj|BAB29280.1| unnamed protein product [Mus musculus]
gi|74201793|dbj|BAE28501.1| unnamed protein product [Mus musculus]
Length = 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|440912894|gb|ELR62418.1| Paired box protein Pax-3, partial [Bos grunniens mutus]
Length = 488
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 222 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 270
>gi|348556456|ref|XP_003464037.1| PREDICTED: paired box protein Pax-3-like [Cavia porcellus]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
Length = 487
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 267
>gi|426221627|ref|XP_004005010.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Ovis
aries]
Length = 489
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 223 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 271
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 267
>gi|53592|emb|CAA42008.1| DNA binding protein [Mus musculus]
Length = 479
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|109726691|gb|ABG45802.1| paired box protein Pax-3-like protein [Bos taurus]
Length = 195
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 22 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 70
>gi|74180492|dbj|BAE34184.1| unnamed protein product [Mus musculus]
Length = 484
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|126338194|ref|XP_001365807.1| PREDICTED: paired box protein Pax-3 [Monodelphis domestica]
Length = 484
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|281345944|gb|EFB21528.1| hypothetical protein PANDA_014672 [Ailuropoda melanoleuca]
Length = 481
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|242020400|ref|XP_002430643.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212515815|gb|EEB17905.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 270
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RR+RT FT QL+ LER+F++THYPDAF+REEL++R+GLSEARVQ + Q
Sbjct: 85 KPRRNRTTFTTIQLSALERVFEKTHYPDAFVREELAKRVGLSEARVQVWFQ 135
>gi|326925807|ref|XP_003209100.1| PREDICTED: paired box protein Pax-3-like [Meleagris gallopavo]
Length = 304
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 63 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 111
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 31 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 90
Query: 142 -VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTA 199
++ S++ +++T +LS ++P TP V P N +P P L S+A
Sbjct: 91 WRRQEKMEASSMKLHDT-----PVLSFNRPPMTP----NVGPMSNSLPLDPWLTSPISSA 141
Query: 200 AAFSAFDPTLLSAAHQYAAAAATVAALGNAP---NGSIFSAASQYPSFSLATLAALHQDR 256
+ P + A A + L AP G A + Y S + +
Sbjct: 142 TTVHSI-PGFMGAPQALQPPYAGHSFLNTAPPMAQGMQPMAPAPY-QCSTPFVDKYPLEE 199
Query: 257 LLSKNSSIADLRLKAKKHAEAIE 279
+ ++SSIA LR+KAK+H + I+
Sbjct: 200 VDQRSSSIASLRMKAKEHIQTID 222
>gi|198470477|ref|XP_001355323.2| GA12075, partial [Drosophila pseudoobscura pseudoobscura]
gi|198145469|gb|EAL32380.2| GA12075, partial [Drosophila pseudoobscura pseudoobscura]
Length = 155
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 77/161 (47%), Gaps = 59/161 (36%)
Query: 162 GIILSNHQP-VSTPLEPCRVAPYV--------------------------------NVPR 188
GI L + P ++TP+EPCR+ PYV NV
Sbjct: 2 GIALRSRSPSLTTPMEPCRMPPYVSLATIQNTIVASIPVTATSTNPQSVRNKNNSKNVTV 61
Query: 189 LPTLP----------FSASTAAAFSAFDPTLLS-AAHQYAAAAATVAALGNAPNGSIFSA 237
PT S++ AAAFSAFDP L+S AAHQYAAA NGS +
Sbjct: 62 DPTYTTAISHSGTKNISSTVAAAFSAFDPALISVAAHQYAAAIT---------NGSGLFS 112
Query: 238 ASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
QY S +LA AA H SK SSIADLR+KAKKH+E++
Sbjct: 113 VPQY-SINLAAFAAAH-----SKRSSIADLRMKAKKHSESL 147
>gi|149711152|ref|XP_001495210.1| PREDICTED: paired box protein Pax-3 isoform 2 [Equus caballus]
Length = 505
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
Length = 462
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 196 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 244
>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
Length = 1024
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 737 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 785
>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
Length = 483
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
transcription factor Pax3
Length = 461
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 195 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 243
>gi|325980252|gb|ADZ48385.1| Pax3 [Polyodon spathula]
Length = 285
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 123 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 171
>gi|390464843|ref|XP_003733295.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|340378028|ref|XP_003387530.1| PREDICTED: retinal homeobox protein Rx-A-like [Amphimedon
queenslandica]
Length = 296
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 49 DLKVNNENECDDSNRLPSS-----ESSRHHI-SRHLSLSPISSCKSS----NKQRRSRTN 98
DL + + E R SS ES + I S S SP+ S K S K +R+RT
Sbjct: 25 DLTIGEKEERRHKQRYTSSCDSAAESDKDSIISDDYSTSPVQSPKGSVNIIMKSKRNRTT 84
Query: 99 FTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
FT QL+ELE +F +THYPD +RE+L+QR+GL E+RVQ + Q
Sbjct: 85 FTAHQLDELEMIFRQTHYPDVLLREKLAQRIGLPESRVQVWFQ 127
>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
Length = 460
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 195 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 243
>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
Length = 459
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 194 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 242
>gi|291392294|ref|XP_002712543.1| PREDICTED: paired box 3-like [Oryctolagus cuniculus]
Length = 505
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI--- 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 41 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 100
Query: 148 -------DVSTVTINNTLNPAGIILSNHQPVS---TPLEPCRVAPYVNVPRLPTLPFSAS 197
D +N PA + N PV + EP + +N PF S
Sbjct: 101 ERGTSEQDGGKEQMNEGNPPARNL--NQSPVDHSRSKKEPMELQQNINRVVGSGGPFFPS 158
Query: 198 TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP-SFSLATLAALHQDR 256
TLL+ A YA A + VA L +P + S P S +R
Sbjct: 159 CLPG------TLLNTA-TYAQALSQVATLKGSP---LCSCCVPDPMGLSFLPPYGCQSNR 208
Query: 257 LLSKNSSIADLRLKAKKHAEAIEMAA 282
+S+A LR+KA++H+EA+ +A
Sbjct: 209 ----TASVAALRMKAREHSEAVLQSA 230
>gi|31563344|ref|NP_852124.1| paired box protein Pax-3 isoform PAX3e [Homo sapiens]
gi|297669550|ref|XP_002812957.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Pongo
abelii]
gi|119591202|gb|EAW70796.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_g [Homo
sapiens]
Length = 505
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 546
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 221 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 269
>gi|297264994|ref|XP_001107509.2| PREDICTED: paired box protein Pax-3 isoform 5 [Macaca mulatta]
gi|332246653|ref|XP_003272467.1| PREDICTED: paired box protein Pax-3 isoform 4 [Nomascus leucogenys]
gi|397495770|ref|XP_003818719.1| PREDICTED: paired box protein Pax-3 isoform 2 [Pan paniscus]
gi|410036243|ref|XP_001165286.2| PREDICTED: paired box protein Pax-3 isoform 3 [Pan troglodytes]
gi|426338714|ref|XP_004033319.1| PREDICTED: paired box protein Pax-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|147903833|ref|NP_001088994.1| paired box protein Pax-3-B [Xenopus laevis]
gi|52082692|gb|AAU25939.1| paired-domain transcription factor Pax3delta isoform [Xenopus
laevis]
Length = 461
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 196 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 244
>gi|196166487|gb|ACG70802.1| orthopedia homeobox protein [Convolutriloba longifissura]
Length = 389
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K +R RT FT QLNELER F++THYPD FMREEL+ R+ L+E+RVQ + Q
Sbjct: 123 KPKRHRTRFTPAQLNELERCFNKTHYPDIFMREELAMRIALTESRVQVWFQ 173
>gi|31563348|ref|NP_852126.1| paired box protein Pax-3 isoform PAX3g [Homo sapiens]
gi|119591198|gb|EAW70792.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_d [Homo
sapiens]
Length = 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|357617166|gb|EHJ70620.1| putative Short stature homeobox protein [Danaus plexippus]
Length = 139
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQN
Sbjct: 20 KQKRHRTRFTPAQLNELERCFTKTHYPDIFMREEIAMRIGLTESRVQN 67
>gi|432103455|gb|ELK30560.1| Paired box protein Pax-3 [Myotis davidii]
Length = 506
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 206 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 254
>gi|148231303|ref|NP_001088993.1| paired box protein Pax-3-A [Xenopus laevis]
gi|82198154|sp|Q645N4.1|PAX3A_XENLA RecName: Full=Paired box protein Pax-3-A; Short=xPax3-A; AltName:
Full=Paired-domain transcription factor Pax3-A
gi|52082694|gb|AAU25940.1| paired-domain transcription factor Pax3 [Xenopus laevis]
Length = 484
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 267
>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 554
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 267
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 267
>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
Length = 850
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|410908673|ref|XP_003967815.1| PREDICTED: ALX homeobox protein 1-like [Takifugu rubripes]
Length = 320
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 97/226 (42%), Gaps = 53/226 (23%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 115 SSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKW 174
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTLNPAG-----IILSNHQPVSTPL 175
+ Q+ D+S + I N L P ++ S P +P
Sbjct: 175 RKRERYGQIQQAKTHFAATYDLSVLPRTDSYSQIPNNLWPGAPPGGPVVSSCMLPRGSP- 233
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
PC V Y + PR S A A A H Y + G+ + F
Sbjct: 234 -PC-VTSYTHPPR--------SAAGA----------ADHGYMGFPSQQNQFGHVSLNNFF 273
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
SA S + A + + SSIA LR+KAK+HA I A
Sbjct: 274 SADSLLAPGANGHHAFETKPEFERRTSSIAVLRMKAKEHAANISWA 319
>gi|351698176|gb|EHB01095.1| Paired box protein Pax-3 [Heterocephalus glaber]
Length = 670
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 297 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 345
>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
Full=Paired-domain transcription factor Pax3-B
Length = 483
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|402889488|ref|XP_003908047.1| PREDICTED: paired box protein Pax-3 isoform 2 [Papio anubis]
Length = 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|30142096|gb|AAP13872.1| paired box 3 splice variant PAX3G [Homo sapiens]
Length = 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|338725621|ref|XP_003365175.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|31563346|ref|NP_852125.1| paired box protein Pax-3 isoform PAX3h [Homo sapiens]
gi|119591203|gb|EAW70797.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_h [Homo
sapiens]
Length = 407
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL+ELER FD+THYPD FMREEL+ R+ L+EARVQ + Q
Sbjct: 49 KQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQ 99
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 24 NECDDSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPI 83
CDD + + D +NE++C P
Sbjct: 185 GGCDDHADGDGRDGIVDMSGAGGGQDASADNEDDC-------------------YGGPPS 225
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ + KQRR RT FT QL+ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 226 AGGTNKRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELASKIGLTEARIQVWFQ 283
>gi|30142098|gb|AAP13873.1| paired box 3 splice variant PAX3H [Homo sapiens]
Length = 407
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|338725619|ref|XP_001495229.2| PREDICTED: paired box protein Pax-3 isoform 3 [Equus caballus]
Length = 424
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 266
>gi|337216969|gb|AEI60176.1| Pax7-forkhead fusion protein [Homo sapiens]
Length = 405
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 15 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 63
>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
Length = 395
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 278
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ + N L P G P P P P P+ S ++
Sbjct: 279 AGANQLAAFNHLLPGGF-----PPTGMPTLPTYQLPEST---YPSTTLSQDGSSTLHRPQ 330
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQ 240
P S+ HQ +A + +A G + N FS+ S+
Sbjct: 331 PLPPSSMHQGGLSADSGSAYGLSSNRHTFSSYSE 364
>gi|80751123|ref|NP_001032182.1| dorsal root ganglia homeobox protein [Danio rerio]
gi|58759849|gb|AAW81987.1| paired-like homeodomain transcription factor DRG11 [Danio rerio]
Length = 287
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI--- 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 41 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWFQNRRAKWRKT 100
Query: 148 -------DVSTVTINNTLNPAGIILSNHQPVS---TPLEPCRVAPYVNVPRLPTLPFSAS 197
D +N PA + N PV + EP + +N PF S
Sbjct: 101 ERGTSEQDGGKEQMNEGNPPARNL--NQSPVDHSRSKKEPMELQQNINRVVGSGGPFFPS 158
Query: 198 TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP-SFSLATLAALHQDR 256
TLL+ A YA A + VA L +P + S P S +R
Sbjct: 159 CLPG------TLLNTA-TYAQALSQVATLKGSP---LCSCCVPDPMGLSFLPPYGCQSNR 208
Query: 257 LLSKNSSIADLRLKAKKHAEAIEMAA 282
+S+A LR+KA++H+EA+ +A
Sbjct: 209 ----TASVAALRMKAREHSEAVLQSA 230
>gi|20975766|gb|AAM33145.1|AF440099_1 orthopedia [Patella vulgata]
Length = 254
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 32 KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREEMALRIGLTESRVQVWFQ 82
>gi|350596588|ref|XP_003361395.2| PREDICTED: paired box protein Pax-3 [Sus scrofa]
Length = 509
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ
Sbjct: 247 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 293
>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
Length = 395
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 278
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ + N L P G P P P P P+ S ++
Sbjct: 279 AGANQLAAFNHLLPGGF-----PPTGMPTLPTYQLPEST---YPSTTLSQDGSSTLHRPQ 330
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQ 240
P S+ HQ +A + +A G + N FS+ S+
Sbjct: 331 PLPPSSMHQGGLSADSGSAYGLSSNRHTFSSYSE 364
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 23/122 (18%)
Query: 20 VNNENECDDSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLS 79
V E C D++ P E S H ++ D+K ++ C + S+S + R
Sbjct: 166 VVKEEACGDNSLSPKDEESLH-----NDGDVKDGEDSVCLSAG----SDSEEGMLKR--- 213
Query: 80 LSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ +
Sbjct: 214 -----------KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVW 262
Query: 140 SQ 141
Q
Sbjct: 263 FQ 264
>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
Length = 319
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 188 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 236
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 100 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRK 159
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVA--PY 183
F Q+ + ST NP I + ++P+ C V P
Sbjct: 160 RERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPTWI---GNNGAASPVPACVVPCDPP 216
Query: 184 VNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
V P S A++ + F + H +G+ S+F AA P
Sbjct: 217 VPACMSPHTHPPGSGASSVTDFLSVPGAGGH-----------VGHPQVCSLFGAAGLSPG 265
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L DR K SSIA LR+KAK+H+ AI A
Sbjct: 266 LNGYELNG-EPDR---KTSSIAALRMKAKEHSAAISWA 299
>gi|322794106|gb|EFZ17315.1| hypothetical protein SINV_02934 [Solenopsis invicta]
Length = 486
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 17/121 (14%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHL 78
++ E CD ++ S SR L DS D+K+ + S+ ES
Sbjct: 121 RLIKEGICDRTSAPSVSAISRLLRGRDSEDDVKLGDGKTSSGSD----CESE-------- 168
Query: 79 SLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
P + K KQRRSRT FT QL+ELER F++T YPD ++REEL+QR LSEAR+Q
Sbjct: 169 ---PGITLK--RKQRRSRTTFTAHQLDELERAFEKTQYPDIYVREELAQRTRLSEARIQV 223
Query: 139 F 139
+
Sbjct: 224 W 224
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--VLNLLI 147
K RR+RT FT QL+ELER F+ +HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 34 KKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNRRAKWRR 93
Query: 148 DVSTVTINNTLNPAGIILSNHQPVST---------PLEPCRVAPYVNVPRLPTLPFSAST 198
T ++ L+ + ++ + P++T PLEP +P + ++P +
Sbjct: 94 QEKLETSSSKLHDSPLLSFSRSPMATGVGPLSNTLPLEPWLTSPIPGTTTVHSMP---AF 150
Query: 199 AAAFSAFDPTLLSAAHQYAAAAAT-VAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL 257
A A PT S + T + L AP + ++P L + Q
Sbjct: 151 MAPSQALQPTYQSHTFLNSGPPMTPIQPLSGAPYQCMGGFMDKFP------LEEMDQ--- 201
Query: 258 LSKNSSIADLRLKAKKHAEAIE 279
++SSIA LR+KAK+H + I+
Sbjct: 202 --RSSSIAALRMKAKEHIQTID 221
>gi|195472307|ref|XP_002088442.1| GE12435 [Drosophila yakuba]
gi|194174543|gb|EDW88154.1| GE12435 [Drosophila yakuba]
Length = 612
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDS--NSDLKVNNENECDDSNRLPSS----ESSRH 72
K+ E CD S S SR + D+ ++DL + + D + SS S H
Sbjct: 128 KLIREGVCDRSTAPSVSAISRLVRGRDAPLDTDLSSASGSPAGDGTKASSSCGSDVSGGH 187
Query: 73 HISRHLSLSPISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELS 126
H + S IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+
Sbjct: 188 HNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELA 247
Query: 127 QRLGLSEARVQNF 139
QR L+EAR+Q +
Sbjct: 248 QRTNLTEARIQVW 260
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 53 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 101
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 278
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ + N L P G P P P P P+ S ++
Sbjct: 279 AGANQLAAFNHLLPGGF-----PPTGMPTLPTYQLPEST---YPSTTLSQDGSSTLHRPQ 330
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQ 240
P S+ HQ +A + +A G + N FS+ S+
Sbjct: 331 PLPPSSMHQGGLSADSGSAYGLSSNRHTFSSYSE 364
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 20 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 68
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Nomascus leucogenys]
Length = 518
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|331271828|gb|AED02519.1| paired box 3 protein [Coturnix japonica]
Length = 114
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 51 GKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 100
>gi|84874540|gb|ABC68267.1| transcription factor Pax3/7 [Capitella teleta]
Length = 416
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
S KQRRSRT F+ +QL LE+ FD THYPD + REEL+QR GL+EARVQ +
Sbjct: 186 SRKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTREELAQRSGLTEARVQVW 236
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
Length = 516
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 212 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 260
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 61/271 (22%)
Query: 27 DDSNRLPSSESSRHLYFTDSNSDLKV-------NNENECDDSNRLPSSESSRHHISRHLS 79
DD NR+P + N+D K + + DDS S ESS H
Sbjct: 67 DDENRVPLT-----------NADAKPAGPASPNRDRDAADDS----SEESSTH------- 104
Query: 80 LSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
+ K+RR+RT FT QL E+ER+F +THYPD +MRE+L+ R L+EARVQ +
Sbjct: 105 -----AAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVW 159
Query: 140 SQ----------VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
Q + + V + +P I + Q T +P + N +
Sbjct: 160 FQNRRAKWRKKERFQQMAGIRQVALG--ADPYDISMGQRQNGYTQAQPTQWTTTTNASCM 217
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL 249
S A+F LS Y +A+ + + ++A QY +
Sbjct: 218 A----PQSNPASFMGVATQALS----YLTSASPPTTNEDTYPSHMTTSAGQY----FPGM 265
Query: 250 AALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
DR + SSIA+LRLKAK+H+ A+ +
Sbjct: 266 PGGDSDR---RTSSIAELRLKAKEHSVAMGL 293
>gi|124054602|gb|ABM89502.1| Pax3 [Scyliorhinus canicula]
Length = 319
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F THYPD + REEL+QR L+EARVQ +
Sbjct: 124 KQRRSRTTFTAEQLEELERAFGRTHYPDIYTREELAQRAKLTEARVQVW 172
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
[human, alveolar rhabdomyosarcoma patient, Peptide, 420
aa]
Length = 420
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 17/102 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF----------- 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 189 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 248
Query: 140 ------SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPL 175
+ +LL T TL P + S +QP +TP+
Sbjct: 249 AGANQLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYQPTTTPI 290
>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
latipes]
Length = 510
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 222 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 270
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
latipes]
Length = 517
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 229 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 277
>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
Length = 502
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|340375161|ref|XP_003386105.1| PREDICTED: hypothetical protein LOC100637124 [Amphimedon
queenslandica]
Length = 332
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RTNFT QL ELE+ F++T YPD FMREEL+ ++ L+EARVQ + Q
Sbjct: 130 GKQRRHRTNFTSHQLEELEKAFEKTRYPDVFMREELAMKISLTEARVQVWFQ 181
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REE++QR L+EARVQ +
Sbjct: 176 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREEVAQRAKLTEARVQVW 224
>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
niloticus]
Length = 509
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 221 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 269
>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
Length = 636
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 347 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 395
>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
Length = 520
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 232 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 280
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL+ELER FD+THYPD FMREEL+ R+ L+EARVQ + Q
Sbjct: 20 KQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQ 70
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 278
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ + N L P G P P P P P+ S ++
Sbjct: 279 AGANQLAAFNHLLPGGF-----PPTGMPTLPTYQLPEST---YPSTTLSQDGSSTLHRPQ 330
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQ 240
P S+ HQ +A + +A G + N FS+ S+
Sbjct: 331 PLPPSSMHQGGLSADSGSAYGLSSNRHTFSSYSE 364
>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
Length = 466
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 232 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRTKLTEARVQVW 280
>gi|259013299|ref|NP_001158374.1| orthopedia homeobox [Saccoglossus kowalevskii]
gi|75012293|sp|Q7YTC2.1|OTP_SACKO RecName: Full=Homeobox protein orthopedia
gi|32307791|gb|AAP79292.1| orthopedia [Saccoglossus kowalevskii]
Length = 322
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 89 KQKRHRTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQVWFQ 139
>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
Length = 502
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 220 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 268
>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
niloticus]
Length = 518
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 230 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 278
>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
Length = 504
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
Length = 805
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 523 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 572
>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
Length = 508
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 221 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 269
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 228 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 276
>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
Length = 503
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|313220525|emb|CBY31375.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 201 KQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEARVQVW 249
>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
Length = 510
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 222 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 270
>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
Length = 516
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 229 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 277
>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 232 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 280
>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Ailuropoda melanoleuca]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
gorilla]
gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 223 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 271
>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
Length = 503
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
Length = 502
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|241849437|ref|XP_002415688.1| homeobox domain, putative [Ixodes scapularis]
gi|215509902|gb|EEC19355.1| homeobox domain, putative [Ixodes scapularis]
Length = 268
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QL ELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 99 KQKRHRTRFTPAQLQELERSFSKTHYPDIFMREELAMRIGLTESRVQVWFQ 149
>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
Length = 467
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
Length = 486
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 197 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 245
>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
Length = 513
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 226 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 274
>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
Length = 515
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 228 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 276
>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
Length = 515
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 228 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 276
>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
Length = 457
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 198 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 246
>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
Length = 517
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 229 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 277
>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
Length = 503
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 223 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 271
>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
Length = 524
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
Length = 436
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 148 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 196
>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
Length = 506
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 267
>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 227 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 275
>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
Length = 506
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 267
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 265
>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
Length = 501
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 223 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 271
>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
Length = 497
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 210 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 258
>gi|379692648|gb|AFD10414.1| Pax3, partial [Capra hircus]
Length = 142
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 13 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 62
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris gallopavo]
Length = 330
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 20 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 68
>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 227 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 275
>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
[Xenopus laevis]
Length = 500
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
Length = 505
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 266
>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
Length = 501
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 227 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 275
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ----NFSQVLNLL 146
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ N
Sbjct: 211 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 270
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSAS 197
+ + N L P G P S P P PY +LP P+ S
Sbjct: 271 AGANQLAAFNHLIPGGF-----PPASMPGLP----PY----QLPEGPYPGS 308
>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
Length = 525
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 265
>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
Length = 501
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
Length = 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 227 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 275
>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 263
>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
Length = 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 227 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 275
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 46/217 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 172 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 231
Query: 138 --NFSQVLNLLIDVSTV----------TINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN 185
F Q+ + ST NP+ I S+ ++P+ C V P +
Sbjct: 232 RERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWIGSSSG---ASPVPGC-VVPCDS 287
Query: 186 VPR-LPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
VP +P P + F + + +G GS+F A
Sbjct: 288 VPSCMPPHPHGPGGVSDF-------------LGVPSPGSSHMGQTHMGSLFGGAGIGGGI 334
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 335 NGYDL-NVDPDR---KSSSIAALRMKAKEHSAAISWA 367
>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
Length = 497
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 208 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 256
>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
Length = 501
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|380027561|ref|XP_003697490.1| PREDICTED: protein gooseberry-neuro-like [Apis florea]
Length = 442
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRT FT EQL +LE F YPD + REEL+QR GL+EAR+Q + +
Sbjct: 179 KQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARLRKH 238
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY--VNVPRLPTLPFSASTAAAFSAFDPT 208
+I +++ S PL PC+ A + +P++P +P + PT
Sbjct: 239 AGSIAHSV------------ASLPLTPCQYASHELAQLPQVPQIPSGIAQIPTTLHHSPT 286
Query: 209 LL----SAAHQYAAAAATVAA 225
L HQ + A ++A
Sbjct: 287 TLQQTSGGVHQVPGSNAQMSA 307
>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
Length = 502
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
Length = 518
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 231 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 279
>gi|80479306|gb|AAI08574.1| Pax3 protein [Xenopus laevis]
Length = 460
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRR RT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 195 KQRRGRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 243
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 227 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 275
>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
Length = 497
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 210 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 258
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTINN--TLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
+ +V+ + N + PA + + P R
Sbjct: 92 ERGTSDQEPGAKEPMAEVTPPPVRNISSPPPADQARGKKETLEAPQSLARAV-------G 144
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL 249
PT PF S TLL+ A YA A + VA+L P S SF L T
Sbjct: 145 PTGPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTY 196
Query: 250 AALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 197 GCQS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|350420707|ref|XP_003492597.1| PREDICTED: protein gooseberry-neuro-like [Bombus impatiens]
Length = 442
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ-NFSQVLNLLIDV 149
KQRRSRT FT EQL +LE F YPD + REEL+QR GL+EAR+Q FS L
Sbjct: 179 KQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARL--- 235
Query: 150 STVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY--VNVPRLPTLPFSASTAAAFSAFDP 207
AG I+ H + PL PC+ A + +P++P +P + P
Sbjct: 236 --------RKHAGSIV--HSVANLPLTPCQYASHELAQIPQVPQIPSGITQVPTTLHHSP 285
Query: 208 TLL----SAAHQ 215
T L +A HQ
Sbjct: 286 TTLQQASTAVHQ 297
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI--- 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 148 -------DVSTVTINNTLNPAGIILSNHQPVSTPLEPCR-----VAPYVNVPRL--PTLP 193
+ S +N P I S +P+E R + ++ R PT P
Sbjct: 92 ERGASDQEGSKEPMNEVTPPVRNINS-----PSPVEQTRNKKDTLEAQQSLSRTVGPTGP 146
Query: 194 FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALH 253
F S TLL+ A YA A + VA+L P S + SF L T
Sbjct: 147 FFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDAMGLSF-LPTYGCQS 198
Query: 254 QDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 -----NRTASVAALRMKAREHSEAVLQSA 222
>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
Length = 505
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 218 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 266
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 209 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 257
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 97/225 (43%), Gaps = 47/225 (20%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----VLNLL 146
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 291 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKR 350
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY-------------VNVPRLPTLP 193
T + L G + + H P+ L+ P+ P+LP
Sbjct: 351 EKAGAQTHTSGLPFPGPLSAGH-PLGPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLP 409
Query: 194 FSASTAAA---------FSAF-------DPTLLSAAHQY-------AAAAATVAALGNAP 230
+AA S F P +S A +A+T AAL P
Sbjct: 410 HPPPGSAALPPGGSPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQP 469
Query: 231 NGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHA 275
N ++ SA Q S AA DR + SSIA LRLKAK+HA
Sbjct: 470 NPAVESAV-QLSGLSDPGTAA--ADR---RASSIAALRLKAKEHA 508
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 78 LSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
LS + I S KS +QRR+RT FT QL+ LE++F+ THYPDAF+REEL++++ L+EARVQ
Sbjct: 153 LSDNGIISAKS-KRQRRNRTTFTTAQLDALEKVFERTHYPDAFLREELAKKVDLTEARVQ 211
Query: 138 NFSQ 141
+ Q
Sbjct: 212 VWFQ 215
>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
Length = 505
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 216 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 264
>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
Length = 524
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 90/217 (41%), Gaps = 46/217 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 53 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 112
Query: 138 ------------NFSQVLNLLIDVSTVTINNTLNPAGIILSNH-QPVSTPLEPCRVAPYV 184
+FS L I NP I S+ PV + PC P
Sbjct: 113 RERFGQMQQVRTHFSTAYELPILTRPENYAQIQNPTWIGSSSGASPVPGCVVPCDPVPSC 172
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
+P P + + F + + +G GS+F
Sbjct: 173 ----MPPHPHAPAGVTDF-------------LGVPSPGSSHMGQTHMGSLFGGPGMGSGI 215
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 216 NGYDL-NVDPDR---KSSSIAALRMKAKEHSAAISWA 248
>gi|350406123|ref|XP_003487663.1| PREDICTED: homeobox protein orthopedia-like [Bombus impatiens]
Length = 352
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F+ THYPD F+REE++ ++GL+E+RVQ + Q
Sbjct: 77 KQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQVWFQ 127
>gi|340709858|ref|XP_003393517.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Bombus terrestris]
Length = 352
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F+ THYPD F+REE++ ++GL+E+RVQ + Q
Sbjct: 77 KQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQVWFQ 127
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 236 KQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEARVQVW 284
>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 526
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 233 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 281
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE+ F +THYPD FMRE+L+ R+ L+EARVQ + Q
Sbjct: 47 KQRRNRTTFTLQQLEELEKAFAQTHYPDVFMREDLAMRINLTEARVQVWFQ 97
>gi|56714085|gb|AAW24013.1| homeodomain protein Pax37a, partial [Oikopleura dioica]
Length = 440
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 189 KQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEARVQ 235
>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
Length = 503
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|328792459|ref|XP_001120088.2| PREDICTED: homeobox protein orthopedia-like [Apis mellifera]
Length = 352
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F+ THYPD F+REE++ ++GL+E+RVQ + Q
Sbjct: 77 KQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQVWFQ 127
>gi|242006780|ref|XP_002424223.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
gi|212507585|gb|EEB11485.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
Length = 152
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ
Sbjct: 73 KQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQ 119
>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
Length = 637
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 348 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 396
>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 512
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 219 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 267
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 159 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 207
>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
Length = 498
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 209 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 257
>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 255 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 303
>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
Length = 592
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 339 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 387
>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
Length = 502
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 261
>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
norvegicus]
Length = 492
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 203 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 251
>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
Length = 503
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 43/211 (20%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNL---- 145
K RR+RT FT QL+ELER F+ +HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 34 KKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNRRAKWRR 93
Query: 146 ---------------LIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLP 190
L+ S I T+ P LSN + PLE +P +
Sbjct: 94 QEKLESSSSTLHDSPLLSFSRSPIATTMGP----LSN----TLPLESWLTSPISGTTTIH 145
Query: 191 TLPFSASTAAAFSAFDPTLLSAAHQYAAAAAT-VAALGNAPNGSIFSA-ASQYPSFSLAT 248
++P + A A PT S + A T + L +AP A ++P
Sbjct: 146 SMP---AFMAPSQALQPTYPSHTFLNSGPAMTPIQPLSSAPYHQCMGGFADKFP------ 196
Query: 249 LAALHQDRLLSKNSSIADLRLKAKKHAEAIE 279
L + Q ++SSIA LR+KAK+H + I+
Sbjct: 197 LEEMDQ-----RSSSIAALRMKAKEHIQTID 222
>gi|340724274|ref|XP_003400508.1| PREDICTED: protein gooseberry-neuro-like [Bombus terrestris]
Length = 442
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ-NFSQVLNLLIDV 149
KQRRSRT FT EQL +LE F YPD + REEL+QR GL+EAR+Q FS L
Sbjct: 179 KQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARL--- 235
Query: 150 STVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY--VNVPRLPTLPFSASTAAAFSAFDP 207
AG I+ H + PL PC+ A + +P++P +P + P
Sbjct: 236 --------RKHAGSIV--HSVANLPLTPCQYASHELAQIPQVPQIPPGITQVPTTLHHSP 285
Query: 208 TLL----SAAHQYAAAAATVA 224
T L +A HQ A ++
Sbjct: 286 TTLQQASTAVHQVPGTNAQMS 306
>gi|321459621|gb|EFX70672.1| hypothetical protein DAPPUDRAFT_36992 [Daphnia pulex]
Length = 74
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 79 SLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
S + +SS SS K RR+RT FT QL+ LE++F+ THYPDAF+RE+L++R+ LSEARVQ
Sbjct: 1 STANVSSSGSSKKPRRNRTTFTSAQLSALEKVFERTHYPDAFVREDLAKRVSLSEARVQV 60
Query: 139 FSQ 141
+ Q
Sbjct: 61 WFQ 63
>gi|313234194|emb|CBY10262.1| unnamed protein product [Oikopleura dioica]
Length = 444
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ QL+ELE+ F+ THYPD + REEL+ R GLSEARVQ +
Sbjct: 165 KQRRSRTTFSANQLDELEKCFERTHYPDIYTREELAGRTGLSEARVQVW 213
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 193 KQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 241
>gi|56714087|gb|AAW24014.1| homeodomain protein Pax37b [Oikopleura dioica]
Length = 444
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ QL+ELE+ F+ THYPD + REEL+ R GLSEARVQ +
Sbjct: 165 KQRRSRTTFSANQLDELEKCFERTHYPDIYTREELAGRTGLSEARVQVW 213
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 23/122 (18%)
Query: 20 VNNENECDDSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLS 79
V E C D++ P E S H ++ D+K ++ C + S+S + R
Sbjct: 166 VVKEEACGDNSLSPKDEESLH-----NDGDVKDGEDSVCLSAG----SDSEEGMLKR--- 213
Query: 80 LSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ +
Sbjct: 214 -----------KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVW 262
Query: 140 SQ 141
Q
Sbjct: 263 FQ 264
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 36/207 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 130 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 189
Query: 142 ----VLNL-LIDVSTVTINNTLNPAGI-ILSNHQPVSTPLEPCRVAPYVNVPRLPTLP-F 194
V ++ L D ++ N + P+ + +S+ P+ + L P N L +LP F
Sbjct: 190 EKLEVTSMKLQDSPILSFNRSPQPSAMSAISSSLPLDSWLTPS----ISNSTALQSLPGF 245
Query: 195 SASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPN---GSIFSAASQYPSFSLATLAA 251
S + ++ P A + A+G P G+ F +YP
Sbjct: 246 VTSPPSLPGSYTPPPFINPASVGHALQPLGAMGPPPPYQCGASF--VDKYP--------- 294
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAI 278
+ +N+SIA LR+KAK+H ++I
Sbjct: 295 --LEEADPRNNSIASLRMKAKEHIQSI 319
>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
Length = 704
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ +QL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 192 KQRRSRTTFSADQLEELERCFERTHYPDIYTREELAQRTRLTEARVQVW 240
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 214 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 262
>gi|313240394|emb|CBY32733.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ QL+ELE+ F+ THYPD + REEL+ R GLSEARVQ +
Sbjct: 189 KQRRSRTTFSANQLDELEKCFERTHYPDIYTREELAGRTGLSEARVQVW 237
>gi|194861365|ref|XP_001969768.1| GG10275 [Drosophila erecta]
gi|190661635|gb|EDV58827.1| GG10275 [Drosophila erecta]
Length = 614
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDS--NSDLKVNNENECDDSNRLPSS----ESSRH 72
K+ E CD S S SR + D+ ++DL + + D + SS S H
Sbjct: 128 KLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDLSSASGSPAGDGTKASSSCGSDVSGGH 187
Query: 73 HISRHLSLSPISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELS 126
H + S IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+
Sbjct: 188 HNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELA 247
Query: 127 QRLGLSEARVQNF 139
QR L+EAR+Q +
Sbjct: 248 QRTNLTEARIQVW 260
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ ++ KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 96 LQGAAAARKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 154
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query: 84 SSCKSS------NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
SSC +S KQRR RT F+ QL+ELE++F THYPD F REEL+QR+ L+EARVQ
Sbjct: 175 SSCSNSPEDNGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQ 234
Query: 138 NFSQVLNLLIDVSTVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPY 183
+ Q N + ++P G S+H P S PL + PY
Sbjct: 235 VWFQ--NRRAKWRKQERTSAVHPYGHTTSHHVPRTSHPL--MQTHPY 277
>gi|348523389|ref|XP_003449206.1| PREDICTED: ALX homeobox protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 318
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 102/231 (44%), Gaps = 65/231 (28%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 115 SSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKW 174
Query: 138 ----NFSQV------------LNLLIDVSTVT-INNTLNP-----AGIILSNHQPVSTPL 175
+ Q+ L++L + T I N L P + ++ S P +P
Sbjct: 175 RKRERYGQIQQAKSHFAAAYDLSVLPRTDSYTQIPNNLWPSPAPGSSVVSSCMLPRGSP- 233
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
PC V Y + PR SA+TA A H Y G+ + F
Sbjct: 234 -PC-VTSYSHSPR------SAATA------------ADHGYMGFPNQQNQFGHVSLNNFF 273
Query: 236 SAASQY-----PSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
SA S P+F + ++SSIA LR+KAK+H I A
Sbjct: 274 SADSLLTPASNPAFDT-------KPEFERRSSSIAVLRMKAKEHTANISWA 317
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 42/51 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR RT FT QL+ELER+F+ THYPD F+REE++ +LGL+EAR+Q + Q
Sbjct: 146 KKRRYRTTFTTHQLDELERVFNRTHYPDIFLREEMAVKLGLTEARIQVWFQ 196
>gi|348523387|ref|XP_003449205.1| PREDICTED: ALX homeobox protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 323
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 102/231 (44%), Gaps = 65/231 (28%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 120 SSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKW 179
Query: 138 ----NFSQV------------LNLLIDVSTVT-INNTLNP-----AGIILSNHQPVSTPL 175
+ Q+ L++L + T I N L P + ++ S P +P
Sbjct: 180 RKRERYGQIQQAKSHFAAAYDLSVLPRTDSYTQIPNNLWPSPAPGSSVVSSCMLPRGSP- 238
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
PC V Y + PR SA+TA A H Y G+ + F
Sbjct: 239 -PC-VTSYSHSPR------SAATA------------ADHGYMGFPNQQNQFGHVSLNNFF 278
Query: 236 SAASQY-----PSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
SA S P+F + ++SSIA LR+KAK+H I A
Sbjct: 279 SADSLLTPASNPAFDT-------KPEFERRSSSIAVLRMKAKEHTANISWA 322
>gi|348522046|ref|XP_003448537.1| PREDICTED: retinal homeobox protein Rx2-like [Oreochromis
niloticus]
Length = 326
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 58/248 (23%)
Query: 53 NNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFD 112
N + E DD+ P + H + K RR+RT FT QL+ELER F+
Sbjct: 110 NLQKEADDAEGSPETTKDEEHAKK--------------KHRRNRTTFTTYQLHELERAFE 155
Query: 113 ETHYPDAFMREELSQRLGLSEARVQNFSQ------VLNLLIDVSTVTINNTLNPAGIILS 166
++HYPD + REEL+ ++ L E RVQ + Q +D +T+ ++++ +LS
Sbjct: 156 KSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKMDTTTMKLHDS-----SMLS 210
Query: 167 NHQPVSTPLEPCRVAPYVN-VPRLPTL--PFSASTA--------AAFSAFDPTLLSAAHQ 215
++P TP V P N +P P L P S++T + + PT S +
Sbjct: 211 FNRPPMTP----NVGPVANPMPLDPWLTSPISSATPMHTIPGFMGSPQSLQPTYPSQSF- 265
Query: 216 YAAAAATVAA----LGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKA 271
A TV +G P S +YP+ DR +SSIA LR+KA
Sbjct: 266 LNAPPMTVQCMQPHMGPPPYQCPPSFNDKYPT---------EDDR----SSSIAALRMKA 312
Query: 272 KKHAEAIE 279
K+H ++++
Sbjct: 313 KEHIQSMD 320
>gi|327387652|gb|AEA72424.1| paired-box 3 [Solea senegalensis]
Length = 221
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ
Sbjct: 175 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 221
>gi|350593920|ref|XP_003359706.2| PREDICTED: paired box protein Pax-3-like, partial [Sus scrofa]
Length = 136
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 22 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 70
>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
Length = 268
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ
Sbjct: 217 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 264
>gi|443689640|gb|ELT91996.1| hypothetical protein CAPTEDRAFT_44697, partial [Capitella teleta]
Length = 255
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
S KQRRSRT F+ +QL LE+ FD THYPD + REEL+QR GL+EARVQ +
Sbjct: 166 SRKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTREELAQRSGLTEARVQVW 216
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 394 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 445
>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
Length = 375
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 217 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 265
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 228 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 279
>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
Length = 502
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 12/100 (12%)
Query: 51 KVNNENECDDSNRLPSSESSRHHISRHLS-----LSPISSCKS------SNKQRRSRTNF 99
K ++E ECD + + ++H I L ++ +S +S KQRRSRT F
Sbjct: 164 KKDDEEECDKKDE-DGEKKTKHSIDGILGDKGSRMNEVSDVESEPDLPLKRKQRRSRTTF 222
Query: 100 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
T EQL ELE+ F+ THYPD + REEL+Q L+EARVQ +
Sbjct: 223 TAEQLEELEKAFERTHYPDIYTREELAQGTKLTEARVQVW 262
>gi|432918406|ref|XP_004079609.1| PREDICTED: ALX homeobox protein 1-like [Oryzias latipes]
Length = 326
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 102/233 (43%), Gaps = 66/233 (28%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 120 SSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKW 179
Query: 138 --------------NFSQVLNL----LIDVSTVTINNTL---NPAGIILSNHQ-PVSTPL 175
+F+ +L D T NN P G ++S+ P +P
Sbjct: 180 RKRERYGQIQQAKTHFAATYDLSALPRTDGYTQIPNNLWPSPTPGGSVVSSCMLPRGSP- 238
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
PC V Y + PR SAS A +A H Y G+ + F
Sbjct: 239 -PC-VTSYPHSPR------SASAA-----------TADHGYMGFPNQQNQFGHVSLNNFF 279
Query: 236 S-------AASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ AA+ +P+F + ++SSIA LR+KAK+H I A
Sbjct: 280 TADSLLTPAANPHPAFEA-------KPEFERRSSSIAVLRMKAKEHTANISWA 325
>gi|322800793|gb|EFZ21669.1| hypothetical protein SINV_02847 [Solenopsis invicta]
Length = 299
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRT F+ EQL LE F YPD + REEL+QR GL+EAR+Q + +
Sbjct: 31 KQRRSRTTFSGEQLEMLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARLRKH 90
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAP----YVNVPRLPTLP 193
T +I +++ + PL PC+ A V +P++P +P
Sbjct: 91 TGSITHSV------------ANLPLTPCQYAAASHELVQIPQVPQMP 125
>gi|195578673|ref|XP_002079188.1| GD22133 [Drosophila simulans]
gi|194191197|gb|EDX04773.1| GD22133 [Drosophila simulans]
Length = 613
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDS--NSDLKVNNENECDDSNRLPSS----ESSRH 72
K+ E CD S S SR + D+ ++D+ + + D + SS S H
Sbjct: 128 KLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGH 187
Query: 73 HISRHLSLSPISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELS 126
H + S IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+
Sbjct: 188 HNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELA 247
Query: 127 QRLGLSEARVQNF 139
QR L+EAR+Q +
Sbjct: 248 QRTNLTEARIQVW 260
>gi|3021452|emb|CAA75669.1| prdl-b protein [Hydra vulgaris]
Length = 228
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 42/51 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR RT FT QL+ELER+F+ THYPD F+REE++ +LGL+EAR+Q + Q
Sbjct: 146 KKRRYRTTFTTHQLDELERVFNRTHYPDIFLREEMAVKLGLTEARIQVWFQ 196
>gi|383861855|ref|XP_003706400.1| PREDICTED: homeobox protein orthopedia-like [Megachile rotundata]
Length = 348
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F+ THYPD F+REE++ ++GL+E+RVQ + Q
Sbjct: 71 KQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQVWFQ 121
>gi|156378114|ref|XP_001630989.1| predicted protein [Nematostella vectensis]
gi|156218021|gb|EDO38926.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 85/205 (41%), Gaps = 62/205 (30%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
K+RR+RT FT QL E+ER+F +THYPD + RE+L+ R L+EARVQ + Q
Sbjct: 13 KKRRNRTTFTAYQLEEMERVFQKTHYPDVYTREQLALRCALTEARVQVWFQ--------- 63
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLL 210
R A + R +P S +D
Sbjct: 64 ---------------------------NRRAKWRKRERFTQVPVPVRGMGPTSIYDQIQP 96
Query: 211 SAAHQYAAAAATVAALGNAPNGSIFSAASQY--PSFSLATLAA-LHQDRLLS-------- 259
S+ + GNAPN S S P SL + AA LH S
Sbjct: 97 SSWPR-----------GNAPNMSPVGTGSGSLPPHMSLPSYAAVLHGQAPQSMPEREKGP 145
Query: 260 ----KNSSIADLRLKAKKHAEAIEM 280
+ SSIA LRLKAK+H+ A+EM
Sbjct: 146 NGERQTSSIAALRLKAKEHSVAMEM 170
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 92/230 (40%), Gaps = 57/230 (24%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 292 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKR 351
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNV----PRLPTL-------------- 192
T P G+ PL PY++ P P L
Sbjct: 352 EKAGAQTHAP-GLPFPGPLSAGHPL-----GPYLDASPFPPHHPALDSAWTAAAAAAAAA 405
Query: 193 -------------------PFSASTAAAFSAF-DPTLLSAAHQY-------AAAAATVAA 225
P ST + F P +S A +A+T AA
Sbjct: 406 FPSLPPPPPGSAALPPGGSPLGLSTFLGAAVFRHPAFISPAFGRLFSTMGPLTSASTAAA 465
Query: 226 LGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHA 275
L PN ++ SA S L+ DR + SSIA LRLKAK+HA
Sbjct: 466 LLRQPNPAVESAVQ---SSGLSDPVTAAADR---RASSIAALRLKAKEHA 509
>gi|24583824|ref|NP_723721.1| paired, isoform B [Drosophila melanogaster]
gi|123412|sp|P06601.1|PRD_DROME RecName: Full=Segmentation protein paired
gi|158160|gb|AAB59221.1| segmentation protein [Drosophila melanogaster]
gi|22946299|gb|AAN10801.1| paired, isoform B [Drosophila melanogaster]
Length = 613
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDS--NSDLKVNNENECDDSNRLPSS----ESSRH 72
K+ E CD S S SR + D+ ++D+ + + D + SS S H
Sbjct: 128 KLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGH 187
Query: 73 HISRHLSLSPISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELS 126
H + S IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+
Sbjct: 188 HNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELA 247
Query: 127 QRLGLSEARVQNF 139
QR L+EAR+Q +
Sbjct: 248 QRTNLTEARIQVW 260
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 6/64 (9%)
Query: 84 SSCKSS------NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
SSC +S KQRR RT F+ QL+ELE++F THYPD F REEL+QR+ L+EARVQ
Sbjct: 196 SSCSNSPEDSGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQ 255
Query: 138 NFSQ 141
+ Q
Sbjct: 256 VWFQ 259
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 92/230 (40%), Gaps = 57/230 (24%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 292 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKR 351
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNV----PRLPTL-------------- 192
T P G+ PL PY++ P P L
Sbjct: 352 EKAGAQTHAP-GLPFPGPLSAGHPL-----GPYLDASPFPPHHPALDSAWTAAAAAAAAA 405
Query: 193 -------------------PFSASTAAAFSAF-DPTLLSAAHQY-------AAAAATVAA 225
P ST + F P +S A +A+T AA
Sbjct: 406 FPSLPPPPPGSAALPPGGSPLGLSTFLGAAVFRHPAFISPAFGRLFSTMGPLTSASTAAA 465
Query: 226 LGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHA 275
L PN ++ SA T AA DR + SSIA LRLKAK+HA
Sbjct: 466 LLRQPNPAVESAVQSSGLSDPVTAAA---DR---RASSIAALRLKAKEHA 509
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 273 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 324
>gi|156371263|ref|XP_001628684.1| predicted protein [Nematostella vectensis]
gi|56785874|gb|AAW29069.1| homeodomain transcription factor PaxD [Nematostella vectensis]
gi|156215667|gb|EDO36621.1| predicted protein [Nematostella vectensis]
Length = 331
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
+K RRSRT FT+ Q +ELER F +THYPD + REEL+QRLGLSEARVQ +
Sbjct: 234 HKPRRSRTRFTVSQTDELERAFRKTHYPDIYAREELAQRLGLSEARVQVW 283
>gi|307192284|gb|EFN75571.1| Homeobox protein orthopedia [Harpegnathos saltator]
Length = 132
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQ+R RT FT QLNELER F +THYPD F+REE++ R+GL+E+RVQ
Sbjct: 75 KQKRHRTRFTPAQLNELERCFGKTHYPDIFLREEIALRIGLTESRVQ 121
>gi|17737409|ref|NP_523556.1| paired, isoform A [Drosophila melanogaster]
gi|7297914|gb|AAF53160.1| paired, isoform A [Drosophila melanogaster]
gi|16076848|gb|AAL13353.1| GH22686p [Drosophila melanogaster]
gi|220945620|gb|ACL85353.1| prd-PA [synthetic construct]
gi|220952756|gb|ACL88921.1| prd-PA [synthetic construct]
Length = 590
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDS--NSDLKVNNENECDDSNRLPSS----ESSRH 72
K+ E CD S S SR + D+ ++D+ + + D + SS S H
Sbjct: 105 KLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGH 164
Query: 73 HISRHLSLSPISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELS 126
H + S IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+
Sbjct: 165 HNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELA 224
Query: 127 QRLGLSEARVQNF 139
QR L+EAR+Q +
Sbjct: 225 QRTNLTEARIQVW 237
>gi|157278545|ref|NP_001098373.1| retinal homeobox protein Rx2 [Oryzias latipes]
gi|17380303|sp|Q9I9A2.1|RX2_ORYLA RecName: Full=Retinal homeobox protein Rx2
gi|7635917|emb|CAB88703.1| Rx2 transcription factor [Oryzias latipes]
Length = 327
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------ 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 133 GKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNRRAKW 192
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTAA 200
+D ST+ ++++ +LS ++P P+ P V N +P P L S+A
Sbjct: 193 RRQEKMDTSTMKLHDS-----PMLSFNRP---PMPPS-VGQVANPMPLDPWLTSPISSAT 243
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL-- 258
P +S+ ++ + L N+P G + P A D+
Sbjct: 244 PMHTI-PGFMSSPQTLQPTYSSHSFL-NSPPGMVQGMQPMGP--PAYQCAPPFNDKYPVE 299
Query: 259 -SKNSSIADLRLKAKKHAEAIE 279
+NSSIA LR+KAK+H ++++
Sbjct: 300 DDRNSSIAALRMKAKEHIQSMD 321
>gi|328778294|ref|XP_394848.4| PREDICTED: protein gooseberry-neuro-like [Apis mellifera]
Length = 441
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRT FT EQL +LE F YPD + REEL+QR GL+EAR+Q + +
Sbjct: 178 KQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARLRKH 237
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPY--VNVPRLPTLPFSASTAAAFSAFDPT 208
+I +++ S PL PC+ A + +P++P +P + PT
Sbjct: 238 AGSIAHSV------------ASLPLTPCQYASHELAQLPQVPQIPSGIAQIPTTLHHSPT 285
Query: 209 LL----SAAHQYAAAAATVAA 225
L HQ + ++A
Sbjct: 286 TLQQTSGGVHQVPGSNGQMSA 306
>gi|124054328|gb|ABM89379.1| PAX7 [Pongo pygmaeus]
Length = 189
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 20 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 68
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 34/206 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 129 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 188
Query: 142 ----VLNL-LIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSA 196
V ++ L D ++ N + P+ + + S PL+ P N L +LP
Sbjct: 189 EKLEVTSMKLQDSPMLSFNRSPQPSAMSALS---SSLPLDSWLTPPLSNSTALQSLPGFV 245
Query: 197 STAAAF-SAFDPTLLSAAHQYAAAAATVAALGNAPN---GSIFSAASQYPSFSLATLAAL 252
+T + ++ P A + A+G P G+ F +YP
Sbjct: 246 TTPTSLPGSYTPPPFINPASMGHALQPLGAMGPPPPYQCGANF--VDKYP---------- 293
Query: 253 HQDRLLSKNSSIADLRLKAKKHAEAI 278
+ + +N+SIA LR+KAK+H ++
Sbjct: 294 -LEEIDPRNNSIASLRMKAKEHIQSF 318
>gi|326674430|ref|XP_001919624.3| PREDICTED: paired box protein Pax-3 [Danio rerio]
Length = 653
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT +QL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 224 KQRRSRTTFTADQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 272
>gi|332028547|gb|EGI68584.1| Segmentation protein paired [Acromyrmex echinatior]
Length = 492
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F++T YPD ++REEL+QR LSEAR+Q +
Sbjct: 198 KQRRSRTTFTAHQLDELERAFEKTQYPDIYVREELAQRTRLSEARIQVW 246
>gi|242008553|ref|XP_002425067.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212508732|gb|EEB12329.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 181
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 43 FTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLE 102
FT+ N + ++++ D+ E R ++SR+ S I KQRR RT F+
Sbjct: 46 FTNCNDTI---DDSQVSDTKEDVLQEVERGNLSRNSRTSGIK-----RKQRRYRTTFSNY 97
Query: 103 QLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
QL+ELER F ETHYPD F REEL+ R+ L+EARVQN
Sbjct: 98 QLDELERAFRETHYPDVFFREELALRIDLTEARVQN 133
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD FMREEL+ R+ L+EARVQ + Q
Sbjct: 116 KQRRYRTTFTSFQLEELERAFQKTHYPDVFMREELAMRIDLTEARVQVWFQ 166
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 289 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 340
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 12 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 63
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 326 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 377
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 142 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 193
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 117 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 176
Query: 142 -VLNLLIDVSTVTINNTLNPAGIILS-----NHQPV-----STPLEPCRVAPYVNVPRLP 190
++VS++ + ++ ILS PV S PLE P L
Sbjct: 177 WRRQEKLEVSSMKLQDS-----PILSFSRSPQAAPVGALGGSLPLETWLGPPVPGGAALQ 231
Query: 191 TLP-FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPN---GSIFSAASQYPSFSL 246
+LP F+A +++ P + A + A+G P G+ F F L
Sbjct: 232 SLPGFAAPPQGLPASYTPPPFLNSPAVTHALQPLGAMGPPPPYQCGAAFVD-----KFPL 286
Query: 247 ATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
D +N+SIA LR+KAK+H ++I
Sbjct: 287 --------DEGDPRNTSIASLRMKAKEHIQSI 310
>gi|307215496|gb|EFN90148.1| Paired mesoderm homeobox protein 2 [Harpegnathos saltator]
Length = 274
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SS + + RRSRT F+ +QL LER+F++THYPDAF+REEL+ R+ L+EARVQ + Q
Sbjct: 48 SSAAGNRRPRRSRTTFSAQQLAALERVFEKTHYPDAFVREELATRVSLTEARVQVWFQ 105
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 91/217 (41%), Gaps = 46/217 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 169 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 228
Query: 138 ------------NFSQVLNLLIDVSTVTINNTLNPAGIILSNH-QPVSTPLEPCRVAPYV 184
+FS L I NP I S+ PV + PC P
Sbjct: 229 RERFGQMQQVRTHFSTAYELPILTRPENYAQIQNPTWIGSSSGASPVPGCVVPCD--PVS 286
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
+ +P P + A F + + +G GS+F
Sbjct: 287 SC--MPPHPHGPAGVADF-------------LGVPSPGGSHMGQTHMGSLFGGPGMGSGI 331
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 332 NGYDL-NVDPDR---KSSSIAALRMKAKEHSAAISWA 364
>gi|291414337|ref|XP_002723417.1| PREDICTED: paired related homeobox 2, partial [Oryctolagus
cuniculus]
Length = 223
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT F QL LER+F+ THYPDAF+REEL++R+ LSEARVQ + Q
Sbjct: 73 KQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQ 123
>gi|195350993|ref|XP_002042021.1| GM26340 [Drosophila sechellia]
gi|194123845|gb|EDW45888.1| GM26340 [Drosophila sechellia]
Length = 613
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 19 KVNNENECDDSNRLPSSESSRHLYFTDS--NSDLKVNNENECDDSNRLPSS----ESSRH 72
K+ E CD S S SR + D+ ++D+ + + D + SS S H
Sbjct: 128 KLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGH 187
Query: 73 HISRHLSLSPISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELS 126
H S IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+
Sbjct: 188 HNHGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELA 247
Query: 127 QRLGLSEARVQNF 139
QR L+EAR+Q +
Sbjct: 248 QRTNLTEARIQVW 260
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 84 SSCKSS------NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
SSC +S KQRR RT F+ QL+ELE++F THYPD F REEL+QR+ L+EARVQ
Sbjct: 196 SSCSNSPEDSGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQ 255
Query: 138 NFSQVLNLLIDVSTVTINNTLNPAGIILSNHQP-VSTPL 175
+ Q N +T++P G +H P S PL
Sbjct: 256 VWFQ--NRRAKWRKQERTSTVHPYGHTTPHHVPRTSHPL 292
>gi|432950125|ref|XP_004084398.1| PREDICTED: paired box protein Pax-7-like [Oryzias latipes]
Length = 403
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 220 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 268
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 330 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 381
>gi|225355244|gb|ACN88554.1| paired box protein 3b [Danio rerio]
Length = 286
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT +QL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 221 KQRRSRTTFTADQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 269
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 326 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 377
>gi|380023702|ref|XP_003695652.1| PREDICTED: homeobox protein orthopedia-like [Apis florea]
Length = 388
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F+ THYPD F+REE++ ++GL+E+RVQ + Q
Sbjct: 113 KQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQVWFQ 163
>gi|322788777|gb|EFZ14345.1| hypothetical protein SINV_02202 [Solenopsis invicta]
Length = 125
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQ+R RT FT QLNELER F +THYPD F+REE++ R+GL+E+RVQ
Sbjct: 75 KQKRHRTRFTPAQLNELERCFGKTHYPDIFLREEIALRIGLTESRVQ 121
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 81 SPISSCKSSN---KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
SP S N KQRR RT F+ QL+ELE++F THYPD F REEL+QR+ L+EARVQ
Sbjct: 159 SPCSGSPDENGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQ 218
Query: 138 NFSQ 141
+ Q
Sbjct: 219 VWFQ 222
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 300 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 350
>gi|26377023|dbj|BAB28278.2| unnamed protein product [Mus musculus]
Length = 488
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQR SRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 222 KQRGSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVW 270
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 28/203 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 129 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 188
Query: 142 ----VLNL-LIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSA 196
V ++ L D ++ N + P+ + + S PL+ P N L +LP
Sbjct: 189 EKLEVTSMKLQDSPMLSFNRSPQPSAMSALS---SSLPLDSWLTPPLSNSTALQSLPGFV 245
Query: 197 STAAAF-SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQD 255
+T + ++ P A + A+G P + + Y + +
Sbjct: 246 TTPTSLPGSYTPPPFINPASMGHALQPLGAMGPPPP---YQCGANY-------VDKYPLE 295
Query: 256 RLLSKNSSIADLRLKAKKHAEAI 278
+ +N+SIA LR+KAK+H ++
Sbjct: 296 EIDPRNNSIASLRMKAKEHIQSF 318
>gi|331271832|gb|AED02521.1| paired box 7 protein [Coturnix japonica]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 87 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVW 135
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 117 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 176
Query: 142 -VLNLLIDVSTVTINNTLNPAGIILS-----NHQPV-----STPLEPCRVAPYVNVPRLP 190
++VS++ + ++ ILS PV S PLE P L
Sbjct: 177 WRRQEKLEVSSMKLQDS-----PILSFSRSPQAAPVGALGGSLPLETWLGPPVPGGAALQ 231
Query: 191 TLP-FSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPN---GSIFSAASQYPSFSL 246
+LP F+A +++ P + A + A+G P G+ F F L
Sbjct: 232 SLPGFAAPPQGLPASYTPPPFLNSPAVTHALQPLGAMGPPPPYQCGAAFVD-----KFPL 286
Query: 247 ATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
D +N+SIA LR+KAK+H ++I
Sbjct: 287 --------DEGDPRNTSIASLRMKAKEHIQSI 310
>gi|194318573|gb|ACF47676.1| paired box gene 3, partial [Capra hircus]
Length = 68
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELER F+ THYPD + REEL+QR L+EARVQ
Sbjct: 21 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 68
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 24/202 (11%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 36 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRR 95
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTAAAF 202
++ S+ +++T +LS +P P V P +P P L S AAA
Sbjct: 96 QEKMEASSTKLHDT-----PMLSFSRPTVAP----SVGPVGGPLPLDPWLTSPLSGAAAV 146
Query: 203 SAFDPTLLSAAHQYAAAAATVAALGNAPNGS-----IFSAASQYPSFSLATLAALHQDRL 257
A P L A +T + L P+ + + + Q P + L +
Sbjct: 147 HAI-PGFLGPAQGLQPPYSTHSFLSGPPSMAQPLQPMAPTSYQCPPSTFVDKFPLEEAE- 204
Query: 258 LSKNSSIADLRLKAKKHAEAIE 279
++SSIA LR+KAK+H + I+
Sbjct: 205 -QRSSSIASLRMKAKEHIQTID 225
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella teleta]
Length = 116
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ KQRR+RT FTL+QL ELE+ F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 46 ARRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTREELAMRINLTEARVQVWFQ 99
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 167 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 226
Query: 145 LLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTAAAFS 203
+D +++ ++++ +LS ++P P V P N +P P L S+A
Sbjct: 227 EKMDNTSMKLHDS-----AMLSFNRPQMPP----SVGPVANPMPLDPWLTSPISSATPMH 277
Query: 204 AFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP-----SFSLATLAALHQDRLL 258
P + + A + A L N P G + S P S + DR
Sbjct: 278 TI-PGFMGSPQGLQPAYPSHAFL-NTPPGMVQSMQPMGPPPYQCPPSFNDKNPMEDDR-- 333
Query: 259 SKNSSIADLRLKAKKHAEAIE 279
+SSIA LR+KAK+H +++
Sbjct: 334 --SSSIAALRMKAKEHIHSMD 352
>gi|332016702|gb|EGI57545.1| Homeobox protein orthopedia [Acromyrmex echinatior]
Length = 393
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQ+R RT FT QLNELER F +THYPD F+REE++ R+GL+E+RVQ
Sbjct: 233 KQKRHRTRFTPAQLNELERCFGKTHYPDIFLREEIALRIGLTESRVQ 279
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 39/208 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 136 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 195
Query: 145 LLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTAAAFS 203
ID ST+ ++++ +LS ++P P V P N +P P LP S+A
Sbjct: 196 EKIDASTMKLHDS-----PMLSFNRPSMHPT----VGPMNNSLPLDPWLPSPLSSA---- 242
Query: 204 AFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQ--------- 254
+ H L G F + Q + S+ +A
Sbjct: 243 -------TPVHSIPGFMGPTQGLQTGYPGHSFLSPPQPMAQSMQPMAPPPYQCPPPFTDK 295
Query: 255 ---DRLLSKNSSIADLRLKAKKHAEAIE 279
+ + ++SSIA LR+KAK+H ++++
Sbjct: 296 YPLEDVDQRSSSIAALRMKAKEHIQSMD 323
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 334 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 385
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like [Oryctolagus
cuniculus]
Length = 269
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 38 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 91
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ + P N+ P +L
Sbjct: 92 -AKWRKTERGA----SDQEPGAKEPMAEVQPPPVRNISSPPPGEQTRSKKEALEAQQSLG 146
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 147 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 204
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 205 QS-----NRTASVAALRMKAREHSEAVLQSA 230
>gi|110754946|ref|XP_001120105.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis mellifera]
Length = 231
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%), Gaps = 3/58 (5%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S+C+ + RRSRT F+ EQL LER+F+ THYPDAF+REEL+ R+ LSEARVQ + Q
Sbjct: 51 SACR---RPRRSRTTFSAEQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQ 105
>gi|355757247|gb|EHH60772.1| Aristaless-related homeobox [Macaca fascicularis]
Length = 290
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 44/71 (61%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ S I
Sbjct: 148 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQPLSPRHPAFISP 207
Query: 150 STVTINNTLNP 160
+ + +T+ P
Sbjct: 208 AFGRLFSTMAP 218
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDV 149
KQRR RT FT QL+ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 10 RKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQNRRAKWRK 69
Query: 150 STVTINNTLNPAGIILSNHQPVSTPLEPC 178
+ +P LS QP+ TP P
Sbjct: 70 QE-KVGPHAHPYSGYLSGGQPLPTPSLPV 97
>gi|148687196|gb|EDL19143.1| Unc4.1 homeobox (C. elegans) [Mus musculus]
Length = 529
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 108 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 158
>gi|7305613|ref|NP_038730.1| homeobox protein unc-4 homolog [Mus musculus]
gi|81882119|sp|O08934.2|UNC4_MOUSE RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
gi|2597990|emb|CAA04542.1| transcriptional control factor [Mus musculus]
gi|7963719|gb|AAF71322.1| UNC4 protein [Mus musculus]
gi|30704666|gb|AAH51973.1| Uncx protein [Mus musculus]
Length = 530
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 108 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 158
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 218 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 269
>gi|195146800|ref|XP_002014372.1| GL18987 [Drosophila persimilis]
gi|194106325|gb|EDW28368.1| GL18987 [Drosophila persimilis]
Length = 387
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 72/151 (47%), Gaps = 58/151 (38%)
Query: 171 VSTPLEPCRVAPYV--------------------------------NVPRLPTLP----- 193
++TP+EPCR+ PYV NV PT
Sbjct: 244 LTTPMEPCRMPPYVSLATIQNTIVASIPVTATSTNPQSVRNKNNSKNVTVDPTYTTAISH 303
Query: 194 -----FSASTAAAFSAFDPTLLS-AAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLA 247
S++ AAAFSAFDP L+S AAHQYAAA NGS + QY S +LA
Sbjct: 304 SGTKNISSTVAAAFSAFDPALISVAAHQYAAAIT---------NGSGLFSVPQY-SINLA 353
Query: 248 TLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
AA H SK SSIADLR+KAKKH+E++
Sbjct: 354 AFAAAH-----SKRSSIADLRMKAKKHSESL 379
>gi|348568378|ref|XP_003469975.1| PREDICTED: homeobox protein unc-4 homolog [Cavia porcellus]
Length = 619
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 187 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 237
>gi|186680512|gb|ACC86107.1| paired box protein 7 transcript variant 1 [Sternopygus macrurus]
Length = 300
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 265
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 39/208 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 136 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 195
Query: 145 LLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTAAAFS 203
ID ST+ ++++ +LS ++P P V P N +P P LP S+A
Sbjct: 196 EKIDASTMKLHDS-----PMLSFNRPSMHPT----VGPMNNSLPLDPWLPSPLSSA---- 242
Query: 204 AFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQ--------- 254
+ H L G F + Q + S+ +A
Sbjct: 243 -------TPVHSIPGFMGPTQGLQTGYPGHSFLSPPQPMAQSMQPMAPPPYQCPPPFTDK 295
Query: 255 ---DRLLSKNSSIADLRLKAKKHAEAIE 279
+ + ++SSIA LR+KAK+H ++++
Sbjct: 296 YPLEDVDQRSSSIAALRMKAKEHIQSMD 323
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 328 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 379
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE+ F +THYPD F RE+L+ R+ L+EARVQ + Q
Sbjct: 97 KQRRNRTTFTLQQLEELEKAFAQTHYPDVFTREDLAMRINLTEARVQVWFQ 147
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 188 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 239
>gi|443692131|gb|ELT93804.1| hypothetical protein CAPTEDRAFT_169576 [Capitella teleta]
Length = 355
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 42/221 (19%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 127 KIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVWFQNRRAKWRKR 186
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTL- 209
+ + L +P P + P V++P +PT P A + F+P +
Sbjct: 187 EKMLGRE---SPTFLGPDRPTDI---PSLLGP-VSLP-IPTGPDPLLAARMQACFNPMVA 238
Query: 210 --------LSAAHQYAAAAATVAALGNAPNGSIFS---------------------AASQ 240
L+A H + A+ L + G +F+ S
Sbjct: 239 LQQGGLPGLAALHMHQKASFPNGFLPTSSTGYLFNSHGSPLAAAAPFMAAAAAAGQGFST 298
Query: 241 YPSFSL----ATLAALHQDRLLSKNSSIADLRLKAKKHAEA 277
P F+L + + A QD + + SSI +LRL+AK+H+
Sbjct: 299 NPLFNLVNQRSRMNAEMQDSIDLRKSSIEELRLRAKEHSGG 339
>gi|347966006|ref|XP_321639.5| AGAP001483-PA [Anopheles gambiae str. PEST]
gi|333470253|gb|EAA01329.5| AGAP001483-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RR+RT FT QL LE++F++THYPDAF+REEL+ ++GLSEARVQ + Q
Sbjct: 22 KPRRNRTTFTTNQLTALEKIFEKTHYPDAFVREELANKVGLSEARVQVWFQ 72
>gi|8393133|ref|NP_058875.1| homeobox protein unc-4 homolog [Rattus norvegicus]
gi|81870610|sp|P97830.1|UNC4_RAT RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1; AltName: Full=Paired-type
homeodomain transcription factor 1
gi|1871471|dbj|BAA13452.1| paired-type homeodomain transcription factor [Rattus norvegicus]
Length = 530
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 108 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALAVRLDLVESRVQVWFQ 158
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI 147
KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q N
Sbjct: 175 GKRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREELAMRVDLTEARVQVWFQ--NRRA 232
Query: 148 DVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDP 207
A + L H P P V PY+++ P P + P
Sbjct: 233 KWRKREKAQAQQQAQMQL--HHPGGLP----GVHPYLDMGCAPHHPGEHPPGVPGLSCPP 286
Query: 208 TLLSAAHQYAAAAATVAALGN-------APNG-SIF--SAASQY-PSFSLATLAALHQ-D 255
+ + ALG P G S F AA + P + L AL + D
Sbjct: 287 LSPLPPALHPGSFPLHPALGGGLLRTPLGPAGFSPFLRGAAPVFRPMLQVDGLQALAESD 346
Query: 256 RLLSKNSSIADLRLKAKKHAEAIE 279
R + SSIA LRLKAK+H+ IE
Sbjct: 347 R---RASSIATLRLKAKEHSAQIE 367
>gi|443692141|gb|ELT93814.1| hypothetical protein CAPTEDRAFT_99648, partial [Capitella teleta]
Length = 107
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 84 SSCKSSN-----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
S+C SS KQ+R RT FT Q+NELE F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 35 SNCSSSQESPGSKQKRHRTRFTPAQINELEHAFSKTHYPDIFMREELALRIGLTESRVQV 94
Query: 139 FSQ 141
+ Q
Sbjct: 95 WFQ 97
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 283 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 334
>gi|24158433|ref|NP_571399.1| paired box 7 isoform 4 [Danio rerio]
gi|2909767|gb|AAC41254.1| transcription factor PAX7A [Danio rerio]
Length = 280
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 265
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 144 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 195
>gi|190339194|gb|AAI63580.1| Pax7a protein [Danio rerio]
Length = 275
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 260
>gi|380030526|ref|XP_003698897.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis florea]
Length = 230
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 78 LSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
L + S+ + + RRSRT F+ EQL LER+F+ THYPDAF+REEL+ R+ LSEARVQ
Sbjct: 41 LECNETSTAPACRRPRRSRTTFSAEQLAALERVFERTHYPDAFVREELATRVSLSEARVQ 100
Query: 138 NFSQ 141
+ Q
Sbjct: 101 VWFQ 104
>gi|149035039|gb|EDL89759.1| Unc4.1 homeobox (C. elegans) [Rattus norvegicus]
Length = 530
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 108 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 158
>gi|156401143|ref|XP_001639151.1| predicted protein [Nematostella vectensis]
gi|156226277|gb|EDO47088.1| predicted protein [Nematostella vectensis]
Length = 525
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
RR RTNFT EQ+ +LE++F++THYPD F REEL+Q++ LSEAR+Q +
Sbjct: 227 RRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSEARIQVW 273
>gi|56785870|gb|AAW29067.1| homeodomain transcription factor PaxB [Nematostella vectensis]
Length = 525
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
RR RTNFT EQ+ +LE++F++THYPD F REEL+Q++ LSEAR+Q +
Sbjct: 227 RRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSEARIQVW 273
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 51 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 104
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 105 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 159
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 160 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 217
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 218 QS-----NRTASVAALRMKAREHSEAVLQSA 243
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 46/204 (22%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF----------- 139
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ +
Sbjct: 138 KHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNRRAKWRRQ 197
Query: 140 ----SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFS 195
+Q + L D +N+ NP L+ + PV +P AP + + P S
Sbjct: 198 EKIEAQTMKLH-DYPMAALNHVRNPERASLAANLPV----DPWMTAPIASAAAISGFPLS 252
Query: 196 ASTA-AAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQ 254
+T+ A+ S F +LL+ +AT+ A+ +P SL L +
Sbjct: 253 PTTSIASNSVFAASLLT--------SATLPAM--------------FPIASLPDLTKVAP 290
Query: 255 DRLLSKNSSIADLRLKAKKHAEAI 278
D S+++S+A LR++A++H E++
Sbjct: 291 D---SRSASVAALRMRAREHLESM 311
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q +
Sbjct: 125 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRR-----A 179
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVA----PYVNVPRLPTLPFSASTAAAFSAFD 206
+ P G + + P VA P+ + PF A+ A+F
Sbjct: 180 KWRKQEKVGPQGHPYNPYLAGGAAPPPSVVASMPNPFSQLGFGFRKPFDANALASFRYNS 239
Query: 207 PTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQD----------- 255
+L QY + L +AP ++S+A + S LA LAA Q
Sbjct: 240 TPVLGT--QYLGTPLSRPPLFSAP---MYSSAPPFHSL-LAGLAAPRQSPDPPPVSPPIS 293
Query: 256 ------------RLLSKNSSIADLRLKAKKHAEAIEM 280
+ ++SSIA LR+ A++H +EM
Sbjct: 294 PGSESPPIQPGPEVERRSSSIAALRMAAREHELRLEM 330
>gi|358340997|dbj|GAA48779.1| homeobox protein aristaless [Clonorchis sinensis]
Length = 699
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QL ELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 447 KQKRHRTRFTPIQLTELERAFSKTHYPDIFMREELALRVGLTESRVQVWFQ 497
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 273 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 324
>gi|358337749|dbj|GAA56083.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 529
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RT FT QLNE+ER+F +THYPD + RE+L+ R GL+EARVQ + Q
Sbjct: 131 KKRRNRTTFTSFQLNEMERIFQKTHYPDVYAREQLAMRTGLTEARVQVWFQ 181
>gi|359320631|ref|XP_853196.2| PREDICTED: intestine-specific homeobox [Canis lupus familiaris]
Length = 232
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI---D 148
+RR RT FT EQL+ELE++F THYPD +R +L+ R+ L EARVQ + Q
Sbjct: 70 KRRVRTTFTTEQLHELEKIFHFTHYPDVHIRNQLAARINLPEARVQIWFQNQRAKWRKQK 129
Query: 149 VSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
++ + L+ AG+ L+ + V+ P+ P + P++ +P P A+A+ T
Sbjct: 130 TGSLGASQQLSEAGLALATNLDVAGPMLPPSIPPWLALPTGCYPPAPGQPASAWFPGQIT 189
Query: 209 LLSA 212
LL
Sbjct: 190 LLPG 193
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 221 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 271
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 161 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 211
>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
Length = 516
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F+ T YPD + REEL+QR LSEAR+Q +
Sbjct: 213 KQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTRLSEARIQVW 261
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 221 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 271
>gi|307170805|gb|EFN62921.1| Homeobox protein orthopedia [Camponotus floridanus]
Length = 136
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQ+R RT FT QLNELER F +THYPD F+REE++ R+GL+E+RVQ
Sbjct: 75 KQKRHRTRFTPAQLNELERCFAKTHYPDIFLREEIAVRIGLTESRVQ 121
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 220 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 270
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ---VLNLLI 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 33 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 92
Query: 148 DVSTVTINNTLNPAGIILS---NHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSA 204
+ + A + + N P ST +EP R + L + +A S
Sbjct: 93 ERGSCEQEGAKESAPEVTTAGRNLSPSST-VEPVRGKKETLEAQQRCLSHDRAVGSATSF 151
Query: 205 FDPTLLSAA----HQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSK 260
F P+ L A YA A + VA+L +P S + SF H +
Sbjct: 152 F-PSCLPGALLNTASYAQALSHVASLKGSPLCSCCVSDPLGLSFLPPYGCQSH------R 204
Query: 261 NSSIADLRLKAKKHAEAIEMAAR 283
+S+A LR+KA++H+EA+ +A+
Sbjct: 205 TASVAALRMKAREHSEAVLQSAQ 227
>gi|195431545|ref|XP_002063797.1| GK15860 [Drosophila willistoni]
gi|194159882|gb|EDW74783.1| GK15860 [Drosophila willistoni]
Length = 692
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SS +KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 578 SSLADKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 635
>gi|402871926|ref|XP_003899897.1| PREDICTED: homeobox protein orthopedia [Papio anubis]
Length = 349
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 130 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 177
>gi|395514737|ref|XP_003761569.1| PREDICTED: homeobox protein unc-4 homolog, partial [Sarcophilus
harrisii]
Length = 498
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 63 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 113
>gi|332259353|ref|XP_003278751.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Nomascus leucogenys]
Length = 504
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 105 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 155
>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
Length = 988
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT +QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 645 KQRRSRTTFTAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 693
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 68 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 118
>gi|122892559|gb|ABM67330.1| PAX7 [Hylobates klossii]
Length = 111
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 64 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 111
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 84 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 134
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 45/215 (20%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTSPPVRNINSPPPGDQARSKKEALEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF----SAASQYPSFSLA 247
+ A F S TLL+ A YA A + VA+L P S S P++
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSFLPTYGCQ 204
Query: 248 TLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
T ++ +S+A LR+KA++H+EA+ +A
Sbjct: 205 T----------NRTASVAALRMKAREHSEAVLQSA 229
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 220 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 270
>gi|122937321|ref|NP_001073930.1| homeobox protein unc-4 homolog [Homo sapiens]
gi|189037644|sp|A6NJT0.1|UNC4_HUMAN RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
Length = 531
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 104 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 154
>gi|301623211|ref|XP_002940916.1| PREDICTED: homeobox protein orthopedia-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 318
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 103 KRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 151
>gi|410923271|ref|XP_003975105.1| PREDICTED: homeobox protein orthopedia B-like isoform 2 [Takifugu
rubripes]
Length = 326
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 115 KRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 163
>gi|301623213|ref|XP_002940917.1| PREDICTED: homeobox protein orthopedia-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 330
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 115 KRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 163
>gi|395845575|ref|XP_003795505.1| PREDICTED: homeobox protein unc-4 homolog [Otolemur garnettii]
Length = 532
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 103 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 153
>gi|157132386|ref|XP_001662548.1| hypothetical protein AaeL_AAEL012405 [Aedes aegypti]
gi|108871202|gb|EAT35427.1| AAEL012405-PA [Aedes aegypti]
Length = 253
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ--NFS 140
I + KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q NFS
Sbjct: 188 IDEFQPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVRNFS 247
Query: 141 QV 142
+
Sbjct: 248 HI 249
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAF 120
I + KQRR RT FT QL ELE+ F THYPD F
Sbjct: 73 IDEFQPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 110
>gi|431907848|gb|ELK11455.1| Homeobox protein orthopedia [Pteropus alecto]
Length = 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|410923269|ref|XP_003975104.1| PREDICTED: homeobox protein orthopedia B-like isoform 1 [Takifugu
rubripes]
Length = 313
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 102 KRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 150
>gi|403256407|ref|XP_003920870.1| PREDICTED: homeobox protein orthopedia [Saimiri boliviensis
boliviensis]
Length = 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|345801489|ref|XP_548725.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Canis lupus familiaris]
Length = 542
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 108 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 158
>gi|345433362|dbj|BAK69338.1| paired-box transcription factor [Balanoglossus simodensis]
Length = 214
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL LER F+ THYPD + REEL+QR L+EARVQ
Sbjct: 165 KQRRSRTTFTCEQLEHLERAFERTHYPDIYTREELAQRASLTEARVQ 211
>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
Length = 483
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 168 KQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 216
>gi|403306599|ref|XP_003943814.1| PREDICTED: uncharacterized protein LOC101038211 [Saimiri
boliviensis boliviensis]
Length = 811
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 158 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 208
>gi|332224786|ref|XP_003261550.1| PREDICTED: homeobox protein orthopedia [Nomascus leucogenys]
Length = 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|6754958|ref|NP_035151.1| homeobox protein orthopedia [Mus musculus]
gi|14149760|ref|NP_115485.1| homeobox protein orthopedia [Homo sapiens]
gi|157074140|ref|NP_001096782.1| homeobox protein orthopedia [Bos taurus]
gi|283837903|ref|NP_001093993.1| orthopedia homeobox [Rattus norvegicus]
gi|114599540|ref|XP_001143053.1| PREDICTED: homeobox protein orthopedia [Pan troglodytes]
gi|297294590|ref|XP_002808478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Macaca mulatta]
gi|297675529|ref|XP_002815727.1| PREDICTED: homeobox protein orthopedia [Pongo abelii]
gi|311249723|ref|XP_003123766.1| PREDICTED: homeobox protein orthopedia-like [Sus scrofa]
gi|395825526|ref|XP_003785979.1| PREDICTED: homeobox protein orthopedia [Otolemur garnettii]
gi|397482986|ref|XP_003812690.1| PREDICTED: homeobox protein orthopedia [Pan paniscus]
gi|6093633|sp|O09113.1|OTP_MOUSE RecName: Full=Homeobox protein orthopedia
gi|74762283|sp|Q5XKR4.1|OTP_HUMAN RecName: Full=Homeobox protein orthopedia
gi|1772994|emb|CAA71439.1| Orthopedia [Mus musculus]
gi|12804737|gb|AAH01800.1| Orthopedia homeobox [Homo sapiens]
gi|119616215|gb|EAW95809.1| orthopedia homolog (Drosophila) [Homo sapiens]
gi|148668598|gb|EDL00917.1| orthopedia homolog (Drosophila) [Mus musculus]
gi|149059074|gb|EDM10081.1| orthopedia homolog (Drosophila), isoform CRA_a [Rattus norvegicus]
gi|151556038|gb|AAI49940.1| OTP protein [Bos taurus]
gi|167773581|gb|ABZ92225.1| orthopedia homeobox [synthetic construct]
gi|261858966|dbj|BAI46005.1| orthopedia homeobox protein [synthetic construct]
gi|351697191|gb|EHB00110.1| Homeobox protein orthopedia [Heterocephalus glaber]
Length = 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|344272674|ref|XP_003408156.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Loxodonta africana]
Length = 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|410948838|ref|XP_003981136.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia [Felis
catus]
Length = 328
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 38 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 88
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 82 PISSCKS-----SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
P S C++ KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+
Sbjct: 57 PNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARI 116
Query: 137 QNFSQ 141
Q + Q
Sbjct: 117 QVWFQ 121
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 53/219 (24%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTINNTLNPAGI--------ILSNHQPVSTPLEPCRVAPY 183
+ +V+ + N +P +L Q + +
Sbjct: 92 ERGASDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEVLEAQQSLGRTVG------- 144
Query: 184 VNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPS 243
PT PF S TLL+ A YA A + VA+L P S S
Sbjct: 145 ------PTGPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLS 191
Query: 244 FSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
F L T ++ +S+A LR+KA++H+EA+ +A
Sbjct: 192 F-LPTYGCQS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|192453582|ref|NP_001122175.1| orthopedia homolog a [Danio rerio]
gi|190337920|gb|AAI62329.1| Otpa protein [Danio rerio]
gi|190339084|gb|AAI62331.1| Otpa protein [Danio rerio]
Length = 332
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVT 153
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q T
Sbjct: 116 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKT 175
Query: 154 INNTLNPAGIILSNH 168
N P ++ ++H
Sbjct: 176 TNVFRAPGTLLPTHH 190
>gi|51979090|gb|AAU20320.1| retinal homeobox [Platynereis dumerilii]
Length = 304
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 28/202 (13%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 114 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKINLPEVRVQVWFQNRRAKWRRQ 173
Query: 145 LLIDVSTVTIN-----NTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLP--FSAS 197
++ +++ +N +L P ++N + P++P AP +N + +LP S
Sbjct: 174 EKLETASLKLNENFPMKSLAPRTPCITN----TLPIDPWLTAPMLNTAHMASLPGFLSHH 229
Query: 198 TAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL 257
T ++ ++ T ++ + + T+ + + ++F+AA+ S +L + + R
Sbjct: 230 TGTSYPSYLSTPTTSITTPSLPSFTLTS-----STAVFAAAAN--STNLNSPKSEDDPR- 281
Query: 258 LSKNSSIADLRLKAKKHAEAIE 279
++SI LR++AK+H +A E
Sbjct: 282 ---STSIVSLRMRAKEHMKAKE 300
>gi|47203313|emb|CAF94225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 20 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 67
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 188 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 238
>gi|380021136|ref|XP_003694430.1| PREDICTED: uncharacterized protein LOC100866617 [Apis florea]
Length = 388
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 73 KQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 121
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 71 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 121
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 203
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 204 QS-----NRTASVAALRMKAREHSEAVLQSA 229
>gi|334325211|ref|XP_001381628.2| PREDICTED: homeobox protein orthopedia-like [Monodelphis domestica]
Length = 325
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|115647030|ref|XP_781057.2| PREDICTED: uncharacterized protein LOC575572 [Strongylocentrotus
purpuratus]
Length = 446
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SC+ K RRSRT FT QL++LER FD T YPD FMREEL+ RL LSE+RVQ + Q
Sbjct: 193 GSCR---KLRRSRTTFTTFQLHQLERAFDMTQYPDVFMREELALRLDLSESRVQVWFQ 247
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 267 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 318
>gi|363744230|ref|XP_003643004.1| PREDICTED: homeobox protein orthopedia [Gallus gallus]
Length = 325
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEVLEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 203
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 204 QS-----NRTASVAALRMKAREHSEAVLQSA 229
>gi|221103284|ref|XP_002161581.1| PREDICTED: homeobox protein OTX2-B-like [Hydra magnipapillata]
Length = 272
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 64 LPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMRE 123
+PS +++ H L+P SC KQRR RT FT QL LE LF +THYPD FMRE
Sbjct: 27 MPSGFPYHSNVNMHYPLAP--SCGFPRKQRRERTTFTKSQLEILEELFLKTHYPDIFMRE 84
Query: 124 ELSQRLGLSEARVQ 137
E ++++ L E+RVQ
Sbjct: 85 EAARKINLPESRVQ 98
>gi|195382485|ref|XP_002049960.1| GJ20457 [Drosophila virilis]
gi|194144757|gb|EDW61153.1| GJ20457 [Drosophila virilis]
Length = 216
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
Query: 72 HHISRHLSLSPI------SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREEL 125
H+I+ + S P+ SS +KQRR RT FT QLNELE++F ETHYPD + REE+
Sbjct: 84 HNITSYNSGYPLKYTDECSSISDKSKQRRIRTTFTSSQLNELEKIFLETHYPDIYTREEI 143
Query: 126 SQRLGLSEARVQNFSQ 141
+ +L L+EARVQ + Q
Sbjct: 144 ASKLHLTEARVQVWFQ 159
>gi|410927106|ref|XP_003977007.1| PREDICTED: paired box protein Pax-7-like, partial [Takifugu
rubripes]
Length = 66
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 18 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 66
>gi|383865413|ref|XP_003708168.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 232
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 78 LSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
L S S+ ++ + RRSRT F+ +QL LER+F+ THYPDAF+REEL+ R+ LSEARVQ
Sbjct: 40 LDCSENSTTAANRRPRRSRTTFSAQQLAALERVFERTHYPDAFVREELATRVSLSEARVQ 99
Query: 138 NFSQ 141
+ Q
Sbjct: 100 VWFQ 103
>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
[Bombus terrestris]
Length = 502
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 190 KQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 238
>gi|296483798|tpg|DAA25913.1| TPA: orthopedia homeobox [Bos taurus]
Length = 283
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 84 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 134
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 175 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 225
>gi|51092426|gb|AAT94555.1| transcription factor orthopedia, partial [Gallus gallus]
Length = 292
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 88 RHRTRFTSAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 135
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 236 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 286
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 68 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 118
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 203
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 204 QS-----NRTASVAALRMKAREHSEAVLQSA 229
>gi|2190464|emb|CAB09537.1| Uncx4.1 [Mus musculus]
Length = 387
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 108 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 158
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--VLNLLID 148
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 95 KQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQ 154
Query: 149 VSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPT 208
+ NP + S+ P + + P+ N+P PF A + P
Sbjct: 155 EKVGPTGHPYNPY-LTTSSGSPAQSVVASSLPNPF-NLPFGLRKPFDALSFRYPPHVLPG 212
Query: 209 LLSAAHQYAAAAAT---VAALGNAPNGSIF-------SAASQ-----------YPSFSLA 247
L + Y ++G P+ S F SAA + P S
Sbjct: 213 YLPSPPPYHRGGPPHLLPPSVGLYPSASSFQTLLANISAAQRPKLPPPQEFATSPPLSPE 272
Query: 248 TLAALHQDRLLSKNSSIADLRLKAKKHAEAIEM 280
T +A+ + + SSIA LRLKA++H +EM
Sbjct: 273 TSSAVTPPDVDRRTSSIATLRLKAREHELRLEM 305
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------ 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 87 GKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKW 146
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPR-LPTLPFSASTAA 200
++ + + ++ +PA N + V+ P P++ P L LP AA
Sbjct: 147 RRQEKMEAARLGLSEYHHPA-----NMRNVAGPALGLPGDPWLTPPGLLSALP--GFLAA 199
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSK 260
+ + P+ L++ + + V A+G+A G++ + S A +
Sbjct: 200 PHTGY-PSYLTSPRRL-PSPPNVGAVGSAVPGTLSGGMTSIGSGGHVAAAPPSPPGHDPR 257
Query: 261 NSSIADLRLKAKKHAEAI 278
+SI LR++AK+H E+I
Sbjct: 258 TTSIQALRMRAKEHVESI 275
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 27/203 (13%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--VLNLLI 147
K RR+RT FT QL+ELER F+ +HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 34 KKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNRRAKWRR 93
Query: 148 DVSTVTINNTLNPAGIILSNHQPVST---------PLEPCRVAPYVNVPRLPTLPFSAST 198
+ ++TL+ + ++ + P +T PLE +P + ++P +
Sbjct: 94 QEKLESSSSTLHDSPLLSFSRSPRATTMGPLSNTLPLESWLTSPISGTTTIHSMP---AF 150
Query: 199 AAAFSAFDPTLLSAAHQYAAAAAT-VAALGNAPNGSIFSA-ASQYPSFSLATLAALHQDR 256
A A PT S + A T + L +AP A ++P L + Q
Sbjct: 151 MAPSQALQPTYPSHTFLNSGPAMTPIQPLSSAPYHQCMGGFADKFP------LEEMDQ-- 202
Query: 257 LLSKNSSIADLRLKAKKHAEAIE 279
++SSIA LR+KAK+H + I+
Sbjct: 203 ---RSSSIAALRMKAKEHIQTID 222
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 238 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 288
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 51 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 101
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 84 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 134
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 34 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 87
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 88 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 142
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 143 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 200
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 201 QS-----NRTASVAALRMKAREHSEAVLQSA 226
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ + Q
Sbjct: 52 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQ 103
>gi|157107387|ref|XP_001649756.1| hypothetical protein AaeL_AAEL014848 [Aedes aegypti]
gi|108868691|gb|EAT32916.1| AAEL014848-PA, partial [Aedes aegypti]
Length = 169
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 88 SSNKQ-RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SSNK+ RR+RT F+ +QL+ LE++F+ THYPDAF+REE++ ++GLSEARVQ + Q
Sbjct: 12 SSNKKLRRNRTTFSSDQLSALEQIFERTHYPDAFLREEIASKVGLSEARVQVWFQ 66
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 51 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 101
>gi|311250806|ref|XP_003124306.1| PREDICTED: homeobox protein unc-4 homolog [Sus scrofa]
Length = 398
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 109 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 159
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 203
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 204 QS-----NRTASVAALRMKAREHSEAVLQSA 229
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 84 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 134
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 49/217 (22%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTINNTLN--PAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
+ +V+ + N LN P G + + E +
Sbjct: 92 ERGASDQEPGAKEPMAEVTPPPVRN-LNSPPPGDQARSKK------EALEAQQSLGRTVG 144
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF----SAASQYPSFS 245
PT PF S TLL+ A YA A + VA+L P S S P++
Sbjct: 145 PTGPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSFLPTYG 197
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
T ++ +S+A LR+KA++H+EA+ +A
Sbjct: 198 CQT----------NRTASVAALRMKAREHSEAVLQSA 224
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 69 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 119
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 84 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 134
>gi|402862720|ref|XP_003895694.1| PREDICTED: homeobox protein unc-4 homolog [Papio anubis]
Length = 490
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 104 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 154
>gi|395510420|ref|XP_003759473.1| PREDICTED: homeobox protein orthopedia [Sarcophilus harrisii]
Length = 325
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
impatiens]
Length = 522
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 213 KQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 261
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNLNSPPPGDQARSKKEALEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 203
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 204 QS-----NRTASVAALRMKAREHSEAVLQSA 229
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 90
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 91 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEVLEAQQSLG 145
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 146 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 203
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 204 QS-----NRTASVAALRMKAREHSEAVLQSA 229
>gi|260810917|ref|XP_002600169.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
gi|229285455|gb|EEN56181.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
Length = 64
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FT +QL LE++F+ THYPDAF+REEL++R+ LSEARVQ + Q
Sbjct: 1 KRKQRRNRTTFTSQQLQALEKVFERTHYPDAFVREELARRVNLSEARVQVWFQ 53
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 38/209 (18%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------V 142
+ K RR+RT FT QL+ELE F+ +HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 34 TKKHRRNRTTFTTYQLHELEHAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNRRAKWR 93
Query: 143 LNLLIDVSTVTINN------TLNPAGIILSNHQPVST--PLEPCRVAPYVNVPRLPTLP- 193
++ ST +++ + +P I ++ P+ST PLEP +P + +P
Sbjct: 94 RQEKLESSTSKLHDSPLFSFSRSP---IATSMGPLSTALPLEPWLTSPISGTTTIHNMPA 150
Query: 194 FSASTAAAFSAFDPTLLSAAHQY---AAAAATVAALGNAPNGSIFSAASQYPSFSLATLA 250
F + A F +H + + L +AP + ++P L
Sbjct: 151 FMTPSQAHLPTF------PSHTFLNSGPPMTPIQPLSSAPYQCMGGFVDKFP------LE 198
Query: 251 ALHQDRLLSKNSSIADLRLKAKKHAEAIE 279
+ Q ++SSIA LR+KAK+H + I+
Sbjct: 199 EMDQ-----RSSSIAALRMKAKEHIQTID 222
>gi|449279931|gb|EMC87364.1| Dorsal root ganglia homeobox protein [Columba livia]
Length = 261
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLI--- 147
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 148 -------DVSTVTINNTLNPAGIILSNHQPVST--PLEPCRVAPYVNVPRLPTLPFSAST 198
+ S T+ PA + S T E + ++ PT PF S
Sbjct: 92 ERGTSDQEGSKETMAEVAPPARNLNSPSPADQTRNKKESLEIQQSLSRAVGPTGPFFPSC 151
Query: 199 AAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLL 258
TLL+ A YA A + VA+L +P S SF L T
Sbjct: 152 LPG------TLLNTA-TYAQALSHVASLKGSPLCSCCVPDPMGLSF-LPTYGCQS----- 198
Query: 259 SKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 NRTASVAALRMKAREHSEAVLQSA 222
>gi|426384329|ref|XP_004058722.1| PREDICTED: homeobox protein orthopedia [Gorilla gorilla gorilla]
Length = 530
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|78190377|gb|ABB29579.1| NVHD101-paired class homeobox protein [Nematostella vectensis]
gi|110339187|gb|ABG67857.1| PAX37A, partial [Nematostella vectensis]
Length = 60
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 93 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
RRSRT FT+ Q +ELER F +THYPD + REEL+QRLGLSEARVQ +
Sbjct: 2 RRSRTRFTVSQTDELERAFRKTHYPDIYAREELAQRLGLSEARVQVW 48
>gi|301769841|ref|XP_002920337.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Ailuropoda melanoleuca]
Length = 298
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 82 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 132
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 81 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 131
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 82 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 132
>gi|291190442|ref|NP_001167372.1| Homeobox protein orthopedia B [Salmo salar]
gi|223649486|gb|ACN11501.1| Homeobox protein orthopedia B [Salmo salar]
Length = 321
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVT 153
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q T
Sbjct: 103 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKT 162
Query: 154 INNTLNPAGIILSNH 168
N P ++ ++H
Sbjct: 163 TNVFRAPGTLLPTHH 177
>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
Length = 501
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ T YPD + REEL+QR L+EARVQ +
Sbjct: 215 KQRRSRTTFTAEQLEELEKAFERTRYPDIYTREELAQRTKLTEARVQVW 263
>gi|348528067|ref|XP_003451540.1| PREDICTED: retinal homeobox protein Rx3-like [Oreochromis
niloticus]
Length = 305
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 109 KKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRR 168
Query: 144 NLLIDVSTVTINNT---------LNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
++VS++ + +T +P + S Q LEP P L +LP
Sbjct: 169 QEKLEVSSIKLQDTPSSSLLSFSRSPTSSLGSGLQ-----LEPWLSTPITTSTSLQSLPG 223
Query: 195 SASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL-AALH 253
+ P + + ++ ++ N+P +S P S L +
Sbjct: 224 FIGNSQGL----PGTYTPSPPPPMPSSLPSSFLNSPP---LGHSSHLPHISSMCLPPPAY 276
Query: 254 QDRLLSKNSSIADLRLKAKKHAEAI 278
Q +NSSIA LR+KAK+H ++I
Sbjct: 277 QCSADPRNSSIASLRMKAKEHIQSI 301
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 38 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 88
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTIN--NTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
+ +V+ + N+ P S + + R
Sbjct: 92 ERGASDQEPGAKEPMAEVTPPPVRNINSPPPGDQTRSKKEALEAQQSLGRTV-------G 144
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATL 249
PT PF S TLL+ A YA A + VA+L P S SF L T
Sbjct: 145 PTGPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTY 196
Query: 250 AALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 197 GCQS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
rubripes]
Length = 285
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|242015336|ref|XP_002428315.1| protein gooseberry, putative [Pediculus humanus corporis]
gi|212512911|gb|EEB15577.1| protein gooseberry, putative [Pediculus humanus corporis]
Length = 390
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELER F T YPD + REEL+Q+ L+EARVQ +
Sbjct: 185 KQRRSRTTFTGEQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVW 233
>gi|260829653|ref|XP_002609776.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
gi|229295138|gb|EEN65786.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
Length = 184
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 46/205 (22%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF---------- 139
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ +
Sbjct: 3 KKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNRRAKWRR 62
Query: 140 -----SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPF 194
+Q + L D +N+ NP L+ + PV +P AP + + P
Sbjct: 63 QEKIEAQTMKLH-DYPMAALNHVRNPERASLAANLPV----DPWMTAPIASAAAISGFPL 117
Query: 195 SASTA-AAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALH 253
S +T+ A+ S F +LL+ +AT+ A+ +P SL L +
Sbjct: 118 SPTTSIASNSVFAASLLT--------SATLPAM--------------FPIASLPDLTKVA 155
Query: 254 QDRLLSKNSSIADLRLKAKKHAEAI 278
D S+++S+A LR++A++H E++
Sbjct: 156 PD---SRSASVAALRMRAREHLESM 177
>gi|6118056|gb|AAF04002.1|AF160992_1 homeodomain protein Otx [Podocoryna carnea]
Length = 276
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 74 ISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 133
++ H L+P SC KQRR RT FT QL LE LF +THYPD FMREE ++++ L E
Sbjct: 40 VNLHYPLAP--SCGFPRKQRRERTTFTKSQLEILEDLFAKTHYPDIFMREEAARKINLPE 97
Query: 134 ARVQ 137
+RVQ
Sbjct: 98 SRVQ 101
>gi|147904024|ref|NP_001084383.1| paired-like homeobox 2b [Xenopus laevis]
gi|38425329|gb|AAR19766.1| homeodomain protein [Xenopus laevis]
Length = 293
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|47209983|emb|CAF94204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 88 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 138
>gi|397498077|ref|XP_003819820.1| PREDICTED: uncharacterized protein LOC100992087 [Pan paniscus]
Length = 591
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 116 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 166
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens mutus]
Length = 257
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 49/217 (22%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 26 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 85
Query: 142 ----------VLNLLIDVSTVTINNTLN--PAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
+ +V+ + N LN P G + + E +
Sbjct: 86 ERGASDQEPGAKEPMAEVTPPPVRN-LNSPPPGDQARSKK------EALEAQQSLGRTVG 138
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF----SAASQYPSFS 245
PT PF S TLL+ A YA A + VA+L P S S P++
Sbjct: 139 PTGPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSFLPTYG 191
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
T ++ +S+A LR+KA++H+EA+ +A
Sbjct: 192 CQT----------NRTASVAALRMKAREHSEAVLQSA 218
>gi|354473084|ref|XP_003498766.1| PREDICTED: homeobox protein orthopedia-like [Cricetulus griseus]
Length = 328
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|172355888|ref|NP_001116492.1| paired-like homeobox 2b [Xenopus (Silurana) tropicalis]
gi|171846498|gb|AAI61760.1| phox2b protein [Xenopus (Silurana) tropicalis]
Length = 293
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|124111297|gb|ABM92047.1| PAX7 [Pan troglodytes]
Length = 54
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 6 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 54
>gi|443692140|gb|ELT93813.1| hypothetical protein CAPTEDRAFT_80905, partial [Capitella teleta]
Length = 60
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
Q+R RT FT QLNELER F++THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 1 QKRHRTRFTPAQLNELERAFEKTHYPDIFMREELALRIGLTESRVQVWFQ 50
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 143 KQRRYRTTFTSFQLEELEKAFARTHYPDVFTREELAMKIGLTEARIQVWFQ 193
>gi|195122770|ref|XP_002005884.1| GI20720 [Drosophila mojavensis]
gi|193910952|gb|EDW09819.1| GI20720 [Drosophila mojavensis]
Length = 216
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SS +KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 102 SSLNDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 159
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 49/217 (22%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTINNTLN--PAGIILSNHQPVSTPLEPCRVAPYVNVPRL 189
+ +V+ + N LN P G + + E +
Sbjct: 92 ERGASDQEPGAKEPMAEVTPPPVRN-LNSPPPGDQARSKK------EALEAQQSLGRTVG 144
Query: 190 PTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF----SAASQYPSFS 245
PT PF S TLL+ A YA A + VA+L P S S P++
Sbjct: 145 PTGPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSFLPTYG 197
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
T ++ +S+A LR+KA++H+EA+ +A
Sbjct: 198 CQT----------NRTASVAALRMKAREHSEAVLQSA 224
>gi|47227513|emb|CAG04661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL+ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 36 RKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQ 87
>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
Length = 531
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 216 KQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 264
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+RR RT FT QL+ELER FD+THYPD FMREEL+ R+ L+EARVQ + Q
Sbjct: 40 ERRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQ 89
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 56 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 106
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 57/219 (26%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL E+ER+F +THYPD +MRE+L+ R L+EARVQ
Sbjct: 117 KKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRRAKWRK 176
Query: 138 --NFSQVLNL-LIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCR------VAPYVNVPR 188
F Q+ + + + + + P S QP P +P R ++P ++ P
Sbjct: 177 KERFQQMAGIRQVALGADPYDMQMAPRPDGYSQIQPA--PWQPSRANNSSCMSPQISPP- 233
Query: 189 LPTLPFSASTAAAFSAFDPTLLSA---AHQYAAAAATVAALGNAPNGSIFSAASQYPSFS 245
PT + AH Y +A+ A N+ +A + +
Sbjct: 234 ------------------PTFMGVAAQAHSYHTSASPGIATTNS------NAFPDHMTVH 269
Query: 246 LATLAALHQDRLLS------KNSSIADLRLKAKKHAEAI 278
+ H D + ++SSIA LRLKAK+H+ A+
Sbjct: 270 VTMANGQHTDMTYTQTCADRRSSSIAALRLKAKEHSAAL 308
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 71 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 121
>gi|113682307|ref|NP_001038539.1| ALX homeobox protein 1 [Danio rerio]
gi|94732446|emb|CAK11128.1| novel protein similar to vertebrate cartilage paired-class
homeoprotein 1 (CART1) [Danio rerio]
Length = 320
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 56/227 (24%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 116 SSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKW 175
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTL--NP-AG--IILSNHQPVSTPL 175
+ Q+ D+S + I+N L P AG ++ S P +P
Sbjct: 176 RKRERYGQIQQAKSHFAATYDISMLPRTDSYSQISNNLWTGPSAGSSVVSSCMIPRGSP- 234
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
PC +PY + PR + + F HQ +L N S+
Sbjct: 235 -PCVTSPYPHSPR--------AAEHGYVGF------PNHQQNQFGVNHVSLNNFFADSLL 279
Query: 236 -SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
S+A+ + +F + ++SSIA LR+KAK+H I A
Sbjct: 280 ASSANSHAAFET-------KPEFERRSSSIAVLRMKAKEHTANISWA 319
>gi|449476334|ref|XP_002191285.2| PREDICTED: homeobox protein unc-4 homolog [Taeniopygia guttata]
Length = 381
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 43 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 93
>gi|62414116|ref|NP_001014818.1| paired mesoderm homeobox protein 2B [Danio rerio]
gi|326673538|ref|XP_003199912.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Danio rerio]
gi|56900854|gb|AAW31722.1| paired-like homeobox 2b [Danio rerio]
gi|190337114|gb|AAI62881.1| Paired-like homeobox 2b [Danio rerio]
gi|190339584|gb|AAI62887.1| Paired-like homeobox 2b [Danio rerio]
Length = 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 99/211 (46%), Gaps = 39/211 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ---------VLNLLIDVSTVTIN-NTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPT 191
+ +V+ N N+ +PA + + + R PT
Sbjct: 92 ERGSSDQEGSKEAMAEVAPPVRNLNSPSPADQTRNKKESLEIQQSLSRAV-------GPT 144
Query: 192 LPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
PF S TLL+ A YA A + VA+L +P S SF L T
Sbjct: 145 GPFFPSCLPG------TLLNTA-TYAQALSHVASLKGSPLCSCCVPDPMGLSF-LPTYGC 196
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 197 QS-----NRTASVAALRMKAREHSEAVLQSA 222
>gi|348511737|ref|XP_003443400.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oreochromis
niloticus]
Length = 285
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|449485972|ref|XP_004175263.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A, partial [Taeniopygia guttata]
Length = 221
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 33 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 83
>gi|432892481|ref|XP_004075802.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oryzias
latipes]
Length = 299
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 91 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 141
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 85
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 86 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 140
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 141 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 198
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 QS-----NRTASVATLRMKAREHSEAVLQSA 224
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 90 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 140
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 53/216 (24%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------ 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 87 GKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKW 146
Query: 142 -----VLNLLIDVSTVTINNTLNPAGIILS-NHQPVSTP------LEPCRVAPYVNVP-- 187
+ + +S N N AG L P TP L AP+ P
Sbjct: 147 RRQEKMEAARLGLSEYHAANMRNVAGPALGLPGDPWLTPPGLLSALPGFLAAPHTGYPSY 206
Query: 188 -----RLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYP 242
RLP+ P A+ A P LS +A++G G + +A P
Sbjct: 207 LTSPRRLPSPPNVATVANTV----PGTLSGG---------MASIGTG--GHVPAAPPSPP 251
Query: 243 SFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
L +++SI LR++AK+H E+I
Sbjct: 252 GHDL-------------RSTSIQALRMRAKEHVESI 274
>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
Length = 298
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
S RR RTNFT EQ+ +LE++F++THYPD F REEL+Q++ LSEAR+Q +
Sbjct: 215 SKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSEARIQVW 265
>gi|147905324|ref|NP_001088286.1| paired-like homeobox 2b [Xenopus laevis]
gi|54038154|gb|AAH84305.1| LOC495120 protein [Xenopus laevis]
Length = 293
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 37 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 87
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 78 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 128
>gi|432960958|ref|XP_004086512.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oryzias
latipes]
Length = 285
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|189303839|gb|ACD85823.1| paired-like homeobox Prd3 [Mnemiopsis leidyi]
Length = 170
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SS KQRR+RTN++ QLNELE +F T YPD F REELS RLG+ EAR+Q + Q
Sbjct: 39 SSFGPHRKQRRNRTNYSAAQLNELELVFQRTRYPDIFTREELSLRLGIPEARIQVWFQ 96
>gi|345484335|ref|XP_001599456.2| PREDICTED: paired mesoderm homeobox protein 2-like [Nasonia
vitripennis]
Length = 250
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%)
Query: 82 PISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
P + KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 86 PPTGAIGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQVWFQ 145
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 34 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 84
>gi|195028334|ref|XP_001987031.1| GH20193 [Drosophila grimshawi]
gi|193903031|gb|EDW01898.1| GH20193 [Drosophila grimshawi]
Length = 219
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SS +KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 105 SSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 162
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----VLNLL 146
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 144 KHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQ 203
Query: 147 IDVSTVTINNTLNPAGIILSNHQPV----STPLEPCRVAPYVNVPRLPTLPFSASTAAAF 202
+ + P + NH P + P++P P N + LP
Sbjct: 204 EKMEAQQMKLQEYPMTALQRNHAPANYSNALPMDPWLTPPIANTTAVHALP--------- 254
Query: 203 SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSA--ASQYPSFSLATLAAL-----HQD 255
+ P L Y T AL + N ++ S + S S T+ A+ D
Sbjct: 255 -GYLPQLGPGISTYPLMPPTSTALNSNFNTTLGSINLNPKLSSISPTTVTAIPPTSPTSD 313
Query: 256 RLLSKN----SSIADLRLKAKKHAEAI 278
L N SSI LR+KAK+H E +
Sbjct: 314 HKLDDNDPRSSSIVSLRMKAKEHIENL 340
>gi|350411803|ref|XP_003489458.1| PREDICTED: homeobox protein ceh-8-like [Bombus impatiens]
Length = 233
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S+ + + RRSRT F+ +QL LER+F+ THYPDAF+REEL+ R+ LSEARVQ + Q
Sbjct: 47 STTPTCRRPRRSRTTFSAQQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQ 104
>gi|357616186|gb|EHJ70056.1| homeobrain [Danaus plexippus]
Length = 261
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RRSRT FT QL+ELER FD+T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 81 RKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELALRLDLSEARVQVWFQ 132
>gi|348523580|ref|XP_003449301.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oreochromis
niloticus]
Length = 301
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 91 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 141
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 48 KQRRNRTTFTLQQLEELENAFAKTHYPDVFTREDLAMKINLTEARVQVWFQ 98
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 21 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 80
Query: 142 ----------VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPT 191
+ +V+ + N +P Q S E + PT
Sbjct: 81 ERGASDQEPGAKEPMAEVTPPPVRNINSPP----PGDQARSK-KEALEAQQSLGRTVGPT 135
Query: 192 LPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
PF S TLL+ A YA A + VA+L P S SF L T
Sbjct: 136 GPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 187
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 188 QS-----NRTASVAALRMKAREHSEAVLQSA 213
>gi|736381|gb|AAA64491.1| Pax7 [Mus musculus]
Length = 290
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EAR Q +
Sbjct: 180 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARFQVW 228
>gi|221123753|ref|XP_002163599.1| PREDICTED: homeobox protein ARX-like [Hydra magnipapillata]
Length = 207
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT F QLNELER F++THYPD F+REEL+ R+GL+E+RVQ + Q
Sbjct: 46 KQKRHRTRFNPSQLNELERYFNKTHYPDIFVREELALRIGLTESRVQVWFQ 96
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 62/226 (27%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 126 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRR 185
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCR--------------VAPYVNVPRL 189
++VS++ + ++ ++ + P S+ L P + P++
Sbjct: 186 QEKLEVSSMKLQDSP----LLSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLG---- 237
Query: 190 PTLPFSASTA-AAFSAFDPTLLSAAHQY---------AAAAATVAALGNAPN-------G 232
P LP +TA + F P Y A + LG P G
Sbjct: 238 PPLPGGGATALQSLPGFGPPGQGLPASYTPPPPFLNSAPLGPGLQQLGPPPAYPCAPAFG 297
Query: 233 SIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
FS YP +NSSIA LRLKAK+H +AI
Sbjct: 298 DKFSLEEAYP-----------------RNSSIAALRLKAKEHIQAI 326
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 156 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 206
>gi|224080279|ref|XP_002189321.1| PREDICTED: paired box protein Pax-7-like, partial [Taeniopygia
guttata]
gi|327292272|ref|XP_003230844.1| PREDICTED: paired box protein Pax-7-like, partial [Anolis
carolinensis]
gi|120974931|gb|ABM46764.1| PAX7 [Gorilla gorilla]
gi|121484047|gb|ABM54349.1| PAX7 [Pan paniscus]
gi|339791146|gb|AEK12234.1| transcription factor pax7 [Bos taurus]
gi|339791148|gb|AEK12235.1| transcription factor pax7 [Bos taurus]
Length = 66
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 18 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 66
>gi|410909774|ref|XP_003968365.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Takifugu
rubripes]
Length = 299
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 91 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 141
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPT 191
+ +V+ + N +P Q S E + PT
Sbjct: 92 ERGASDQEPGAKEPMAEVTPPPVRNINSPP----PGDQARSK-KEALEAQQSLGRTVGPT 146
Query: 192 LPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
PF S TLL+ A YA A + VA+L P S SF L T
Sbjct: 147 GPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 198
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 QS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|356582262|ref|NP_001239128.1| paired-like homeobox 2a [Xenopus (Silurana) tropicalis]
Length = 281
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 91 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 141
>gi|148224192|ref|NP_001084385.1| paired-like homeobox 2a [Xenopus laevis]
gi|38425325|gb|AAR19764.1| homeodomain protein [Xenopus laevis]
gi|115529155|gb|AAI24892.1| Phox2a protein [Xenopus laevis]
Length = 281
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 91 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 141
>gi|363739532|ref|XP_414766.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Gallus gallus]
Length = 445
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 96 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 146
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL+ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 36 RKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQ 87
>gi|307182442|gb|EFN69677.1| Paired mesoderm homeobox protein 2B [Camponotus floridanus]
Length = 368
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ +
Sbjct: 138 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQGW 186
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 85
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 86 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARSKKEALEAQQSLG 140
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 141 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 198
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 QS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|444515967|gb|ELV11025.1| Homeobox protein unc-4 like protein [Tupaia chinensis]
Length = 302
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 16 KRRRTRTNFTGWQLEELEKAFSESHYPDVFMREALALRLDLVESRVQVWFQ 66
>gi|18859191|ref|NP_571175.1| homeobox protein orthopedia B [Danio rerio]
gi|5326681|gb|AAD42021.1| orthopedia protein [Danio rerio]
Length = 328
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVT 153
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q T
Sbjct: 114 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKT 173
Query: 154 INNTLNPAGIILSNH 168
N P G +L H
Sbjct: 174 TNVFRAP-GTLLPTH 187
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 96/227 (42%), Gaps = 63/227 (27%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 171 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRR 230
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCR---------------VAPYVNVPR 188
++VS++ + ++ ++ + P S+ L P + P++
Sbjct: 231 QEKLEVSSMKLQDSP----LLSFSRSPPSSALAPLGTGPGSGSGPPGSALPLEPWLG--- 283
Query: 189 LPTLPFSASTA-AAFSAFDPTLLSAAHQY---------AAAAATVAALGNAPN------- 231
P LP +TA + F P Y A + LG P
Sbjct: 284 -PPLPGGGATALQSLPGFGPPGQGLPASYTPPPPFLNSAPLGPGLQQLGPPPAYPCAPAF 342
Query: 232 GSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
G FS YP +NSSIA LRLKAK+H +AI
Sbjct: 343 GDKFSLEEAYP-----------------RNSSIAALRLKAKEHIQAI 372
>gi|82235907|sp|Q6DGH9.1|OTBP_DANRE RecName: Full=Homeobox protein orthopedia B
gi|49904617|gb|AAH76366.1| Otpb protein [Danio rerio]
gi|197246959|gb|AAI64107.1| Otpb protein [Danio rerio]
Length = 315
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVSTVT 153
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q T
Sbjct: 101 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKT 160
Query: 154 INNTLNPAGIILSNH 168
N P G +L H
Sbjct: 161 TNVFRAP-GTLLPTH 174
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 22 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 72
>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
Length = 296
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ EQ+ ELER F+ T YPD + REEL+ R GL+EARVQ +
Sbjct: 160 KQRRSRTTFSAEQVEELERAFERTQYPDIYTREELALRTGLTEARVQVW 208
>gi|322366546|gb|ADW95347.1| Unc4 [Paracentrotus lividus]
Length = 171
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
NK+RRSRTNF QL ELER F+E+HYPD F RE L+ RL L E+RVQ + Q
Sbjct: 111 NKRRRSRTNFNGWQLEELERAFNESHYPDVFTREALAMRLDLVESRVQVWFQ 162
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 62/226 (27%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 135 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRR 194
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCR--------------VAPYVNVPRL 189
++VS++ + ++ ++ + P S+ L P + P++
Sbjct: 195 QEKLEVSSMKLQDSP----LLSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLG---- 246
Query: 190 PTLPFSASTA-AAFSAFDPTLLSAAHQY---------AAAAATVAALGNAPN-------G 232
P LP +TA + F P Y A + LG P G
Sbjct: 247 PPLPGGGATALQSLPGFGPPGQGLPASYTPPPPFLNSAPLGPGLQQLGPPPAYPCAPAFG 306
Query: 233 SIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
FS YP +NSSIA LRLKAK+H +AI
Sbjct: 307 DKFSLEEAYP-----------------RNSSIAALRLKAKEHIQAI 335
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------ 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 87 GKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKW 146
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPR-LPTLPFSASTAA 200
++ + + ++ +P N + V+ P P++ P L LP AA
Sbjct: 147 RRQEKMEAARLGLSEYHHPG-----NMRNVAGPALGLPGDPWLTPPGLLSALP--GFLAA 199
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSK 260
+ + P+ L++ + + V A+G+A G + + + S A +
Sbjct: 200 PHTGY-PSYLTSPRRL-PSPPNVGAVGSAVPGGLSAGMTSIGSGGHVAAAPPSPPGHDPR 257
Query: 261 NSSIADLRLKAKKHAEAI 278
+SI LR++AK+H E+I
Sbjct: 258 TTSIQALRMRAKEHVESI 275
>gi|307205017|gb|EFN83540.1| Paired mesoderm homeobox protein 2B [Harpegnathos saltator]
Length = 223
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ--NFSQVLNLLID 148
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ N+ V + D
Sbjct: 144 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQITNYLLVQYWITD 203
Query: 149 VSTVT 153
S++
Sbjct: 204 SSSMV 208
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 198 KQRRYRTTFTSFQLEELERAFQKTHYPDVFTREELAMRINLTEARVQVWFQ 248
>gi|426233819|ref|XP_004023251.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Ovis aries]
Length = 361
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 104 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 151
>gi|46309511|ref|NP_996953.1| paired mesoderm homeobox protein 2A [Danio rerio]
gi|42542899|gb|AAH66448.1| Paired-like homeobox 2a [Danio rerio]
Length = 277
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 88 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 138
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRR------ 85
Query: 151 TVTINNTLNPAGIILSNHQP-VSTPLEPCRVAPYVNVPRLP----------------TLP 193
T A S+ +P P+ P N+ P +L
Sbjct: 86 -AKWRKTERGA----SDQEPGAKEPMAEVTPPPVRNINSPPPGDQARGKKEALEAQQSLG 140
Query: 194 FSASTAAAF--SAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A F S TLL+ A YA A + VA+L P S SF L T
Sbjct: 141 RTVGPAGPFFPSCLPGTLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 198
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 QS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|383852902|ref|XP_003701964.1| PREDICTED: protein gooseberry-neuro-like [Megachile rotundata]
Length = 440
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 15/106 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRRSRT FT EQL +LE F YPD + REEL+QR GL+EAR+Q + +
Sbjct: 178 KQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRARLRKH 237
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVA---PYVNVPRLPTLP 193
+I +++ AG+ PL PC+ A +P++P +P
Sbjct: 238 AGSIAHSV--AGL----------PLTPCQYASGHELGQIPQVPQMP 271
>gi|359319138|ref|XP_546055.4| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia [Canis
lupus familiaris]
Length = 329
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 149
>gi|194667831|ref|XP_001252231.2| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
Length = 314
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 62/226 (27%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 137 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRR 196
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCR--------------VAPYVNVPRL 189
++VS++ + ++ ++ + P S+ L P + P++
Sbjct: 197 QEKLEVSSMKLQDSP----LLSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLG---- 248
Query: 190 PTLPFSASTA-AAFSAFDPTLLSAAHQY---------AAAAATVAALGNAPN-------G 232
P LP +TA + F P Y A + LG P G
Sbjct: 249 PPLPGGGATALQSLPGFGPPGQGLPASYTPPPPFLNSAPLGPGLQQLGPPPAYPCAPAFG 308
Query: 233 SIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
FS YP +NSSIA LRLKAK+H +AI
Sbjct: 309 DKFSLEEAYP-----------------RNSSIAALRLKAKEHIQAI 337
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 82
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 40/58 (68%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
SS KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 86 SSGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQVWFQ 143
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 162 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 212
>gi|449671313|ref|XP_002164410.2| PREDICTED: homeobox protein orthopedia-like, partial [Hydra
magnipapillata]
Length = 230
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F++THYPD F+REEL+ R+ L+E+RVQ + Q
Sbjct: 24 KQKRHRTRFTQTQLNELERYFNKTHYPDIFVREELAMRIDLTESRVQVWFQ 74
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 38 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 88
>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
Length = 213
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT +QL+ELER F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 155 KQRRSRTTFTAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVW 203
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 90/217 (41%), Gaps = 46/217 (21%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ------------ 137
K+RR+RT FT QL ELE++F +THYPD + RE+L+ R L+EARVQ
Sbjct: 171 GKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRK 230
Query: 138 --NFSQVLNLLIDVSTVT----INNTLNPAGII-------LSNHQPVSTPLEPCRVAPYV 184
F Q+ + ST + N A I S PV + PC
Sbjct: 231 RERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNSSWIGSSSGASPVPGCVVPCDTVSSC 290
Query: 185 NVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSF 244
+P P + F + + +G GS+F A
Sbjct: 291 ----MPPHPHGPGGVSDF-------------LGVPSPGSSHMGQTHMGSLFGGAGISGGI 333
Query: 245 SLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
+ L + DR K+SSIA LR+KAK+H+ AI A
Sbjct: 334 NGYDL-NVDPDR---KSSSIAALRMKAKEHSAAISWA 366
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 74 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 124
>gi|295389208|gb|ADG03434.1| homeobrain [Nematostella vectensis]
Length = 294
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 90/202 (44%), Gaps = 30/202 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 99 KVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVWFQNRRAKWRKR 158
Query: 151 TVTIN----NTLNPAGIILSNHQPVSTPLEPCRVAPYVNVP-----RL-PTLPFSASTAA 200
+ N + P ++ V T L P A Y VP R P +P
Sbjct: 159 EKALGRESPNFMYPG--HGGEYRGVPTELPPLHTA-YQPVPPSFMDRWNPHVP------- 208
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALG-NAPN---GSIFSAASQYPSFSLATLAALHQDR 256
A S P +A QY + A G +P+ I A Y L+ R
Sbjct: 209 ALSLISP-YATAPPQYGPMGPHIGAPGYYSPHLLRHYIHPAMVPYLKGPLSPPQGHDMRR 267
Query: 257 LLSKNSSIADLRLKAKKHAEAI 278
+SI DLR KAKKH+ +I
Sbjct: 268 -----TSIEDLRHKAKKHSASI 284
>gi|82570537|gb|ABB83740.1| OTP-paired class homeobox protein [Nematostella vectensis]
gi|110339217|gb|ABG67872.1| OTP [Nematostella vectensis]
Length = 60
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 39/50 (78%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
Q+R RT FT QLNELER F THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 1 QKRHRTRFTPAQLNELERCFARTHYPDVFMREELAARIGLTESRVQVWFQ 50
>gi|355691419|gb|EHH26604.1| Homeobox protein orthopedia, partial [Macaca mulatta]
gi|355750014|gb|EHH54352.1| Homeobox protein orthopedia, partial [Macaca fascicularis]
Length = 186
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ + Q
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 153
>gi|431901319|gb|ELK08346.1| Dorsal root ganglia homeobox protein [Pteropus alecto]
Length = 381
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + L + +
Sbjct: 36 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQLANSCLKTELQIE 95
Query: 151 TVTINNTL 158
IN+T+
Sbjct: 96 ---INDTI 100
>gi|270012821|gb|EFA09269.1| gooseberry [Tribolium castaneum]
Length = 406
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 80 LSPISSCKSSN-----------KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQR 128
L P SSC S+ KQRRSRT FT EQL LER F T YPD + REEL+Q+
Sbjct: 161 LGPNSSCDESDTESEPGIPLKRKQRRSRTTFTGEQLEALERAFGRTQYPDVYTREELAQK 220
Query: 129 LGLSEARVQNF 139
L+EARVQ +
Sbjct: 221 TKLTEARVQVW 231
>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
Length = 665
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT +QL+ELE+ F+ T YPD + REEL QR L+EARVQ +
Sbjct: 354 KQRRSRTTFTAQQLDELEKAFERTQYPDVYTREELGQRTRLTEARVQVW 402
>gi|443711291|gb|ELU05119.1| hypothetical protein CAPTEDRAFT_228124 [Capitella teleta]
Length = 354
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 16/98 (16%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF----------- 139
K +R+RT+FT +Q+ ELE+ F++THYPD F RE L+Q+L L EAR+Q +
Sbjct: 135 KLQRNRTSFTTQQIEELEKEFEKTHYPDVFARERLAQKLDLPEARIQVWFSNRRAKWRRE 194
Query: 140 ----SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVST 173
+Q + V+ + IN++ P G+ S HQP+++
Sbjct: 195 EKLRNQRREVETGVNRIPINSSF-PNGMYPSIHQPIAS 231
>gi|194209207|ref|XP_001917289.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2B-like [Equus caballus]
Length = 315
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|301618086|ref|XP_002938457.1| PREDICTED: homeobox protein unc-4 homolog [Xenopus (Silurana)
tropicalis]
Length = 483
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 100 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 150
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------ 141
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 87 GKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKW 146
Query: 142 VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPR-LPTLPFSASTAA 200
++ + + ++ +P N + V+ P P++ P L LP AA
Sbjct: 147 RRQEKMEAARLGLSEYHHPG-----NMRNVAGPALGLPGDPWLTPPGLLSALP--GFLAA 199
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRLLSK 260
+ + P+ L++ + + V A+G+A G + + + S A +
Sbjct: 200 PHTGY-PSYLTSPRRL-PSPPNVGAVGSAVPGGLSAGMTSIGSGGHVPAAPPSPPGHDPR 257
Query: 261 NSSIADLRLKAKKHAEAI 278
+SI LR++AK+H E+I
Sbjct: 258 TTSIQALRMRAKEHVESI 275
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 53 KQRRYRTTFTSYQLEELEKAFGKTHYPDVFTREELAMRVDLTEARVQVWFQ 103
>gi|125807005|ref|XP_001360225.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
gi|195149359|ref|XP_002015625.1| GL10922 [Drosophila persimilis]
gi|54635396|gb|EAL24799.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
gi|194109472|gb|EDW31515.1| GL10922 [Drosophila persimilis]
Length = 216
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 109 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 159
>gi|126331693|ref|XP_001365345.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Monodelphis
domestica]
Length = 314
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 95 KQRRNRTTFTLQQLEELESAFVQTHYPDVFTREDLAMKINLTEARVQVWFQ 145
>gi|435419|gb|AAA03627.1| PAX-3-FKHR gene fusion, partial [Homo sapiens]
Length = 689
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 91 KQRRSRTNFTLEQLNELERL-FDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE + F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 70 KQRRSRTTFTAEQLEELEHVAFERTHYPDIYTREELAQRAKLTEARVQVW 119
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 51 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 101
>gi|402869237|ref|XP_003898672.1| PREDICTED: paired mesoderm homeobox protein 2B [Papio anubis]
Length = 314
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--------- 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKT 91
Query: 142 ----------VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPT 191
+ +V+ + N +P Q S E + PT
Sbjct: 92 ERGASEQEPGAKEPMAEVTPPPVRNINSPP----PGDQARSK-KEALEAQQSLGRTVGPT 146
Query: 192 LPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
PF S TLL+ A YA A + VA+L P S SF L T
Sbjct: 147 GPFFPSCLPG------TLLNTA-TYAQALSHVASLKGGPLCSCCVPDPMGLSF-LPTYGC 198
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIEMAA 282
++ +S+A LR+KA++H+EA+ +A
Sbjct: 199 QS-----NRTASVAALRMKAREHSEAVLQSA 224
>gi|395542879|ref|XP_003773352.1| PREDICTED: paired mesoderm homeobox protein 2B [Sarcophilus
harrisii]
Length = 265
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|340726685|ref|XP_003401684.1| PREDICTED: hypothetical protein LOC100649005 [Bombus terrestris]
Length = 314
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ + Q
Sbjct: 137 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 187
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 43/214 (20%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 31 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 90
Query: 142 -VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTL--PFSAS 197
++ S++ +++T +LS ++P T V P N +P P L P S++
Sbjct: 91 WRRQEKMEASSMKLHDT-----PMLSFNRPPMT----ANVGPMSNSLPLDPWLTSPISSA 141
Query: 198 TA--------AAFSAFDPTLLSAAHQY----AAAAATVAALGNAPNGSIFSAASQYPSFS 245
T A A P H + A + + AP +YP
Sbjct: 142 TPVHSIPGFMGAPQALQPPY--GGHSFLNTPPGMAQGMQPMAPAPYQCGTPFVDKYP--- 196
Query: 246 LATLAALHQDRLLSKNSSIADLRLKAKKHAEAIE 279
L + Q ++SSIA LR+KAK+H + I+
Sbjct: 197 ---LEDVDQ-----RSSSIASLRMKAKEHIQTID 222
>gi|72084142|ref|XP_791442.1| PREDICTED: aristaless homeobox protein [Strongylocentrotus
purpuratus]
Length = 505
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 208 TKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQVWFQ 261
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 95/217 (43%), Gaps = 43/217 (19%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 134 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRR 193
Query: 144 NLLIDVSTVTINNT-------------LNPAGI---ILSNHQPVSTPLEPCRVAPYVNVP 187
++VS++ + ++ L P G S + PLE P++
Sbjct: 194 QEKLEVSSMKLQDSPLLSFIRSPPSSALAPLGTGPGSGSGPPGSALPLE-----PWLG-- 246
Query: 188 RLPTLPFSASTA-AAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSL 246
PTLP +TA + F P Y L +AP G Q
Sbjct: 247 --PTLPGGGATALQSLPGFGPPGQGLPASYTPPPPF---LNSAPLG---PGLQQLGPPPA 298
Query: 247 ATLAALHQDRL-----LSKNSSIADLRLKAKKHAEAI 278
A D+ +NSSIA LRLKAK+H +AI
Sbjct: 299 YPCAPAFGDKFSLEERSPRNSSIAALRLKAKEHIQAI 335
>gi|17986113|ref|NP_523834.1| putative homeodomain protein [Drosophila melanogaster]
gi|7291665|gb|AAF47087.1| putative homeodomain protein [Drosophila melanogaster]
gi|113204973|gb|ABI34220.1| RT01102p [Drosophila melanogaster]
Length = 220
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 161
>gi|395856674|ref|XP_003800746.1| PREDICTED: uncharacterized protein LOC100945104 isoform 1 [Otolemur
garnettii]
Length = 279
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|395734890|ref|XP_002814749.2| PREDICTED: uncharacterized protein LOC100444086 [Pongo abelii]
Length = 276
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 39 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 89
>gi|325980258|gb|ADZ48388.1| Phox2b [Polyodon spathula]
Length = 248
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 86 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 136
>gi|321456241|gb|EFX67353.1| hypothetical protein DAPPUDRAFT_18151 [Daphnia pulex]
Length = 62
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQ+R RT FT QLNELER F +THYPD FMREE++ R+GL+E+RVQ + Q
Sbjct: 1 KQKRHRTRFTPTQLNELERSFTKTHYPDIFMREEIAMRIGLTESRVQVWFQ 51
>gi|113120201|gb|ABI30248.1| PaxD2 [Nematostella vectensis]
Length = 364
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 77 HLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
H SL P + KQRRSRT FT +Q++ELE+ F +T YPD + REEL+QRL L+EARV
Sbjct: 245 HFSLDP--DFLLTRKQRRSRTKFTSKQVDELEKAFLKTQYPDVYTREELAQRLNLTEARV 302
Query: 137 QNF 139
Q +
Sbjct: 303 QVW 305
>gi|115678906|ref|XP_001199761.1| PREDICTED: uncharacterized protein LOC763703 [Strongylocentrotus
purpuratus]
Length = 477
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 180 TKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQVWFQ 233
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ + Q
Sbjct: 137 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 187
>gi|297557144|gb|ADI46415.1| homeobox protein unc-4-like protein, partial [Monodelphis
domestica]
Length = 160
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 105 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 155
>gi|410902843|ref|XP_003964903.1| PREDICTED: homeobox protein unc-4 homolog [Takifugu rubripes]
Length = 479
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 99 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLIESRVQVWFQ 149
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris gallopavo]
Length = 228
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ----- 141
+ K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 31 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 90
Query: 142 -VLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTA 199
++ S++ +++T +LS ++P T V P N +P P L S+A
Sbjct: 91 WRRQEKMEASSMKLHDT-----PMLSFNRPPMT----ANVGPMSNSLPLDPWLTSPISSA 141
Query: 200 AAFSAFDPTLLSAAHQYAAAAATVAALGNAPN---GSIFSAASQYPSFSLATLAALHQDR 256
+ P + A + L P G A + Y S + +
Sbjct: 142 TPVHSI-PGFMGAPQALQPPYGGHSFLNTPPGMAQGMQPMAPAPY-QCSTPFVDKFPLED 199
Query: 257 LLSKNSSIADLRLKAKKHAEAIE 279
+ ++SSIA LR+KAK+H + I+
Sbjct: 200 VDQRSSSIASLRMKAKEHIQTID 222
>gi|354505900|ref|XP_003515005.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Cricetulus griseus]
Length = 148
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
Length = 481
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELE+ F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 129 KQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVW 177
>gi|260802230|ref|XP_002595995.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
gi|229281249|gb|EEN52007.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
Length = 406
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 125 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 175
>gi|348509388|ref|XP_003442231.1| PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus]
Length = 491
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 99 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLIESRVQVWFQ 149
>gi|195153954|ref|XP_002017888.1| GL17416 [Drosophila persimilis]
gi|194113684|gb|EDW35727.1| GL17416 [Drosophila persimilis]
Length = 401
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 44 TDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
T++ S L V+N++E L SS ++ H +S + K RRSRT FT Q
Sbjct: 109 TNTESGLDVDNDDE------LSSSLNNGHDLS---------DMERPRKVRRSRTTFTTFQ 153
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
L++LER F++T YPD F RE+L+ RL LSEARVQ + Q
Sbjct: 154 LHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 191
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 23 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 73
>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
Length = 230
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 60 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 110
>gi|195586201|ref|XP_002082866.1| GD25001 [Drosophila simulans]
gi|194194875|gb|EDX08451.1| GD25001 [Drosophila simulans]
Length = 220
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 161
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|198458250|ref|XP_001360969.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
gi|198136274|gb|EAL25545.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
Length = 404
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 44 TDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
T++ S L V+N++E L SS ++ H +S + K RRSRT FT Q
Sbjct: 112 TNTESGLDVDNDDE------LSSSLNNGHDLS---------DMERPRKVRRSRTTFTTFQ 156
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
L++LER F++T YPD F RE+L+ RL LSEARVQ + Q
Sbjct: 157 LHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 194
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 82
>gi|126310947|ref|XP_001372601.1| PREDICTED: homeobox protein aristaless-like 3-like [Monodelphis
domestica]
Length = 336
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KS NK+RR+RT F+ QL ELE++F +THYPD + RE+L+ R L+EARVQ + Q
Sbjct: 141 KSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQ 195
>gi|113204913|gb|ABI34190.1| RT01002p [Drosophila melanogaster]
Length = 220
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 161
>gi|73974940|ref|XP_852840.1| PREDICTED: paired mesoderm homeobox protein 2B [Canis lupus
familiaris]
Length = 314
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|348557251|ref|XP_003464433.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Cavia porcellus]
Length = 328
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 149
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 45 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 96
>gi|297475806|ref|XP_002688259.1| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
gi|296486633|tpg|DAA28746.1| TPA: paired-like homeobox 2b-like [Bos taurus]
Length = 315
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|296196663|ref|XP_002745937.1| PREDICTED: paired mesoderm homeobox protein 2B [Callithrix jacchus]
Length = 314
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|435421|gb|AAA03628.1| PAX-3, partial [Homo sapiens]
Length = 332
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 91 KQRRSRTNFTLEQLNELERL-FDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL ELE + F+ THYPD + REEL+QR L+EARVQ +
Sbjct: 70 KQRRSRTTFTAEQLEELEHVAFERTHYPDIYTREELAQRAKLTEARVQVW 119
>gi|6679401|ref|NP_032914.1| paired mesoderm homeobox protein 2B [Mus musculus]
gi|12707580|ref|NP_003915.2| paired mesoderm homeobox protein 2B [Homo sapiens]
gi|109074098|ref|XP_001098028.1| PREDICTED: paired mesoderm homeobox protein 2B [Macaca mulatta]
gi|114593819|ref|XP_001149518.1| PREDICTED: paired mesoderm homeobox protein 2B [Pan troglodytes]
gi|332219062|ref|XP_003258677.1| PREDICTED: paired mesoderm homeobox protein 2B [Nomascus
leucogenys]
gi|426344195|ref|XP_004038660.1| PREDICTED: paired mesoderm homeobox protein 2B [Gorilla gorilla
gorilla]
gi|6093753|sp|O35690.1|PHX2B_MOUSE RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|116242712|sp|Q99453.2|PHX2B_HUMAN RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|2632151|emb|CAA74833.1| PHOX2b protein [Mus musculus]
gi|5672613|dbj|BAA82671.1| NBPhox [Mus musculus]
gi|16877955|gb|AAH17199.1| Paired-like homeobox 2b [Homo sapiens]
gi|50927508|gb|AAH79610.1| Paired-like homeobox 2b [Mus musculus]
gi|119613395|gb|EAW92989.1| paired-like homeobox 2b [Homo sapiens]
gi|148705829|gb|EDL37776.1| paired-like homeobox 2b [Mus musculus]
Length = 314
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|392353126|ref|XP_344240.4| PREDICTED: paired mesoderm homeobox protein 2B [Rattus norvegicus]
Length = 301
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|284026526|gb|ADB66163.1| Otx-like protein 1 [Aurelia sp. 1 NN-2010a]
Length = 104
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 74 ISRHLSLSPISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 133
++ H L+P SC KQRR RT FT QL LE LF +THYPD FMREE+++++ L E
Sbjct: 27 VNLHYPLAP--SCAFPRKQRRERTTFTKAQLEILEDLFSKTHYPDIFMREEVARKINLPE 84
Query: 134 ARVQ 137
+RVQ
Sbjct: 85 SRVQ 88
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 51 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 101
>gi|293341707|ref|XP_001077800.2| PREDICTED: uncharacterized protein LOC364152 [Rattus norvegicus]
Length = 270
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|195347243|ref|XP_002040163.1| GM15498 [Drosophila sechellia]
gi|194135512|gb|EDW57028.1| GM15498 [Drosophila sechellia]
Length = 220
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 161
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 96/227 (42%), Gaps = 63/227 (27%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VL 143
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 134 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRR 193
Query: 144 NLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCR---------------VAPYVNVPR 188
++VS++ + ++ ++ + P S+ L P + P++
Sbjct: 194 QEKLEVSSMKLQDSP----LLSFSRSPPSSALAPLGTGPGSGSGPPGSALPLEPWLG--- 246
Query: 189 LPTLPFSASTA-AAFSAFDPTLLSAAHQY---------AAAAATVAALGNAPN------- 231
P LP +TA + F P Y A + LG P
Sbjct: 247 -PPLPGGGATALQSLPGFGPPGQGLPASYTPPPPFLNSAPLGPGLQQLGPPPAYPCAPAF 305
Query: 232 GSIFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAI 278
G FS YP +NSSIA LRLKAK+H +AI
Sbjct: 306 GDKFSLEEAYP-----------------RNSSIAALRLKAKEHIQAI 335
>gi|194754287|ref|XP_001959427.1| GF12058 [Drosophila ananassae]
gi|190620725|gb|EDV36249.1| GF12058 [Drosophila ananassae]
Length = 217
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 110 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 160
>gi|197359132|gb|ACH69782.1| retinal homeobox protein 2 [Anabarilius grahami]
Length = 284
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 100 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 159
Query: 145 LLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVN-VPRLPTLPFSASTAAAFS 203
ID ++ ++++ +LS ++P P V P N +P P L S+A
Sbjct: 160 EKIDTGSMKLHDS-----PMLSFNRPTMAP----NVGPMTNSLPLDPWLSSPLSSATPMH 210
Query: 204 AFDPTLLSAAHQYAAAAATVAALGNAPNGSIFSAASQYPSFSLATLAALHQDRL--LSKN 261
+ P + + A N+ G + P A + L + ++
Sbjct: 211 SI-PGFMGPSQSLQPAYTGHPGFLNSSPGMVQGMQPMPPPPYQCPPAFNDKYPLEDVDRS 269
Query: 262 SSIADLRLKAKKHAE 276
SSIA LR+KAK+H +
Sbjct: 270 SSIAALRMKAKEHIQ 284
>gi|194885740|ref|XP_001976486.1| GG19984 [Drosophila erecta]
gi|190659673|gb|EDV56886.1| GG19984 [Drosophila erecta]
Length = 219
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 110 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 160
>gi|157129916|ref|XP_001661815.1| paired box protein, putative [Aedes aegypti]
gi|108872028|gb|EAT36253.1| AAEL011647-PA [Aedes aegypti]
Length = 283
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ + Q
Sbjct: 23 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 73
>gi|348538997|ref|XP_003456976.1| PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus]
Length = 532
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 100 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 150
>gi|395535578|ref|XP_003769800.1| PREDICTED: homeobox protein aristaless-like 3 [Sarcophilus
harrisii]
Length = 357
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KS NK+RR+RT F+ QL ELE++F +THYPD + RE+L+ R L+EARVQ + Q
Sbjct: 162 KSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQ 216
>gi|195489357|ref|XP_002092703.1| GE11517 [Drosophila yakuba]
gi|194178804|gb|EDW92415.1| GE11517 [Drosophila yakuba]
Length = 219
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QLNELE++F ETHYPD + REE++ +L L+EARVQ + Q
Sbjct: 110 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 160
>gi|4633284|gb|AAD26698.1|AF117979_1 homeodomain transcription factor NBPHOX [Homo sapiens]
gi|1841338|dbj|BAA11555.1| NBPhox [Homo sapiens]
gi|5672611|dbj|BAA82670.1| NBPhox [Homo sapiens]
Length = 314
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|18202522|sp|Q26657.2|ALX_STRPU RecName: Full=Aristaless homeobox protein; Short=ALX; AltName:
Full=SpPrx-1
gi|2055317|dbj|BAA19774.1| homeobox [Strongylocentrotus purpuratus]
Length = 327
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
+ KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 208 TKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQVWFQ 261
>gi|170045356|ref|XP_001850278.1| paired box protein [Culex quinquefasciatus]
gi|167868438|gb|EDS31821.1| paired box protein [Culex quinquefasciatus]
Length = 479
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 139
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|119619438|gb|EAW99032.1| aristaless related homeobox, isoform CRA_b [Homo sapiens]
Length = 258
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 36/47 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ
Sbjct: 194 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 240
>gi|47218913|emb|CAF98111.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 72 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 122
>gi|390459504|ref|XP_003732326.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100409683 [Callithrix jacchus]
Length = 574
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLL--ID 148
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ ++ + + D
Sbjct: 104 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVKTRRPSRIRRPD 163
Query: 149 VSTVTINNTLNPAGIILSNHQPVS 172
+ P G I + +P+S
Sbjct: 164 PGLGARWDAFVPGGEISTGLRPLS 187
>gi|195442996|ref|XP_002069225.1| GK21081 [Drosophila willistoni]
gi|194165310|gb|EDW80211.1| GK21081 [Drosophila willistoni]
Length = 614
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+QR L+EAR+
Sbjct: 195 ISDCESEPGIALKRKQRRCRTTFSAAQLDELERAFERTQYPDIYTREELAQRTNLTEARI 254
Query: 137 QNF 139
Q +
Sbjct: 255 QVW 257
>gi|449270500|gb|EMC81167.1| Paired mesoderm homeobox protein 2A, partial [Columba livia]
Length = 178
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
S KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ
Sbjct: 10 SGINEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 63
>gi|291222403|ref|XP_002731203.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 379
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 168 KVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVWFQ 218
>gi|194753688|ref|XP_001959142.1| GF12736 [Drosophila ananassae]
gi|190620440|gb|EDV35964.1| GF12736 [Drosophila ananassae]
Length = 410
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 44 TDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
T+++ L V+N++E L SS ++ H +S + K RRSRT FT Q
Sbjct: 111 TNTDGGLDVDNDDE------LSSSLNNGHDLS---------DMERPRKVRRSRTTFTTFQ 155
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
L++LER F++T YPD F RE+L+ RL LSEARVQ + Q
Sbjct: 156 LHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 193
>gi|62183710|gb|AAX73253.1| Uncx4.1 [Danio rerio]
Length = 470
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 100 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 150
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 47 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 98
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FT++QL ELE F +THYPD F RE+L+ R+ L+EARVQ + Q
Sbjct: 53 KQRRNRTTFTVQQLEELESAFAKTHYPDVFTREDLALRINLTEARVQVWFQ 103
>gi|403300665|ref|XP_003941040.1| PREDICTED: paired mesoderm homeobox protein 2B [Saimiri boliviensis
boliviensis]
Length = 242
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|149035327|gb|EDL90031.1| paired-like homeobox 2b (predicted) [Rattus norvegicus]
Length = 294
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 49 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 99
>gi|58396719|gb|AAW72799.1| homeobox protein orthopedia, partial [Perionyx excavatus]
Length = 53
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
Q+R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 1 QKRHRTRFTPAQLNELERAFAKTHYPDIFMREELALRIGLTESRVQ 46
>gi|391338110|ref|XP_003743404.1| PREDICTED: uncharacterized protein LOC100901399 [Metaseiulus
occidentalis]
Length = 789
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 92 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
QRR+RT FT++QL ELER F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 298 QRRNRTTFTVQQLEELERAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 347
>gi|62131821|gb|AAX68745.1| paired-like homeobox 2b [Danio rerio]
Length = 285
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ
Sbjct: 96 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 142
>gi|444731497|gb|ELW71850.1| Paired mesoderm homeobox protein 2A [Tupaia chinensis]
Length = 317
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 156 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 207
>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
Length = 439
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 28/123 (22%)
Query: 23 ENECDDSNRLPSSESSRHLYFTDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSP 82
E CD S+ S SR L D D K+N+ C +S+
Sbjct: 128 EGICDRSSVPSVSAISRLLRGRDGEDDRKINDG--CKNSDN------------------- 166
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
S C+S KQRRSRT FT QL+ELE+ F+ T YPD + REEL+QR L+EAR+
Sbjct: 167 -SDCESEPGIPLKRKQRRSRTTFTALQLDELEKAFERTQYPDIYTREELAQRTKLTEARI 225
Query: 137 QNF 139
Q +
Sbjct: 226 QVW 228
>gi|224049967|ref|XP_002188708.1| PREDICTED: paired mesoderm homeobox protein 2B [Taeniopygia
guttata]
Length = 187
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|110762829|ref|XP_001121339.1| PREDICTED: hypothetical protein LOC725502 [Apis mellifera]
Length = 250
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S+ KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 86 STGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQVWFQ 143
>gi|73988195|ref|XP_542326.2| PREDICTED: paired mesoderm homeobox protein 2A [Canis lupus
familiaris]
Length = 284
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|410972832|ref|XP_003992860.1| PREDICTED: paired mesoderm homeobox protein 2A, partial [Felis
catus]
Length = 273
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 77 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 128
>gi|335294428|ref|XP_003357226.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Sus scrofa]
Length = 286
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|149719311|ref|XP_001499207.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Equus
caballus]
Length = 284
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|149068721|gb|EDM18273.1| paired-like homeobox 2a [Rattus norvegicus]
Length = 281
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|6679399|ref|NP_032913.1| paired mesoderm homeobox protein 2A [Mus musculus]
gi|6093752|sp|Q62066.1|PHX2A_MOUSE RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=Aristaless homeobox protein homolog; AltName:
Full=PHOX2A homeodomain protein; AltName:
Full=Paired-like homeobox 2A
gi|402642|emb|CAA52923.1| Phox2 homeodomain protein [Mus musculus]
gi|225000420|gb|AAI72722.1| Paired-like homeobox 2a [synthetic construct]
gi|225000566|gb|AAI72615.1| Paired-like homeobox 2a [synthetic construct]
Length = 280
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|340724400|ref|XP_003400570.1| PREDICTED: hypothetical protein LOC100651262 [Bombus terrestris]
gi|350397686|ref|XP_003484956.1| PREDICTED: hypothetical protein LOC100748675 [Bombus impatiens]
Length = 251
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S+ KQRR RT FT QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 86 STGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQVWFQ 143
>gi|195401625|ref|XP_002059413.1| GJ18584 [Drosophila virilis]
gi|194142419|gb|EDW58825.1| GJ18584 [Drosophila virilis]
Length = 405
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 15/98 (15%)
Query: 44 TDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
T++ S L V+NE+E L SS ++ H + + K RRSRT FT Q
Sbjct: 122 TNTESGLDVDNEDE------LSSSLNNGHDLG---------DMERPRKVRRSRTTFTTFQ 166
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
L++LER F++T YPD F RE+L+ RL LSEARVQ + Q
Sbjct: 167 LHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 204
>gi|53791211|dbj|BAD54702.1| transcription factor [Rattus norvegicus]
Length = 281
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 153 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLALKINLTEARVQVWFQ 203
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 50 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 100
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 91/202 (45%), Gaps = 30/202 (14%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 19 KVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVWFQNRRAKWRKR 78
Query: 151 TVTIN----NTLNPAGIILSNHQPVSTPLEPCRVAPYVNVP-----RL-PTLPFSASTAA 200
+ N + P ++ V T L P A Y VP R P +P
Sbjct: 79 EKALGRESPNFMYPG--HGGEYRGVPTELPPLHTA-YQPVPPSFMDRWNPHVP------- 128
Query: 201 AFSAFDPTLLSAAHQYAAAAATVAALG-NAPN---GSIFSAASQYPSFSLATLAALHQDR 256
A S P +A QY + A G +P+ I A Y L+ H R
Sbjct: 129 ALSLISP-YATAPPQYGPMGPHIGAPGYYSPHLLRHYIHPAMVPYLKGPLSPPQG-HDMR 186
Query: 257 LLSKNSSIADLRLKAKKHAEAI 278
+SI DLR KAKKH+ +I
Sbjct: 187 ----RTSIEDLRHKAKKHSASI 204
>gi|395814903|ref|XP_003780977.1| PREDICTED: paired mesoderm homeobox protein 2A [Otolemur garnettii]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|84380301|gb|ABC58683.1| EBX transcription factor [Capitella teleta]
Length = 355
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
K RRSRT FT QL++LER F++T YPD F REEL+ RL SEARVQ + Q
Sbjct: 127 KIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDHSEARVQVWFQNRRAKWRKR 186
Query: 151 TVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTL- 209
+ + L +P P + P V++P +PT P A + F+P +
Sbjct: 187 EKMLGRE---SPTFLGPDRPTDI---PSLLGP-VSLP-IPTGPDPLLAARMQACFNPMVA 238
Query: 210 --------LSAAHQYAAAAATVAALGNAPNGSIFS---------------------AASQ 240
L+A H + A+ L + G +F+ S
Sbjct: 239 LQQGGLPGLAALHMHQKASFPNGFLPTSSTGYLFNSHGSPLAAAAPFMAAAAAAGQGFST 298
Query: 241 YPSFSL----ATLAALHQDRLLSKNSSIADLRLKAKKHAEA 277
P F+L + + A QD + + SSI +LRL+AK+H+
Sbjct: 299 NPLFNLVNQRSRMNAEMQDSIDLRKSSIEELRLRAKEHSGG 339
>gi|431898078|gb|ELK06781.1| Paired mesoderm homeobox protein 2A [Pteropus alecto]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|189236734|ref|XP_001815189.1| PREDICTED: similar to paired box protein [Tribolium castaneum]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ + Q
Sbjct: 42 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 92
>gi|328802691|ref|NP_001179086.1| paired mesoderm homeobox protein 2A [Bos taurus]
gi|296479851|tpg|DAA21966.1| TPA: paired-like homeobox 2a-like [Bos taurus]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|402894541|ref|XP_003910413.1| PREDICTED: paired mesoderm homeobox protein 2A [Papio anubis]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 20/127 (15%)
Query: 32 LPSSESSRHLYFTDSNSDLKVNNE--NECDDSNRLPSSESSRHHISRHLSLSPISSCKS- 88
+ SE+ +++T+ + +L + +E S++ P E+ ISR + + + + +
Sbjct: 1 MQGSEAGSEVHWTECSWELGAGSWKVDEASTSSQWPLLET---RISRQENWAVLGTGTAP 57
Query: 89 --------------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 134
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EA
Sbjct: 58 FGNHPPGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 117
Query: 135 RVQNFSQ 141
RVQ + Q
Sbjct: 118 RVQVWFQ 124
>gi|363733528|ref|XP_001234151.2| PREDICTED: paired mesoderm homeobox protein 2B [Gallus gallus]
Length = 250
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|4102043|gb|AAD01418.1| homeobox protein [Homo sapiens]
Length = 343
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 75 SRHLSLSP-----ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 129
S HL LSP + K+ +K+RR+RT F+ QL ELE++F +THYPD + RE+L+ R
Sbjct: 131 SLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 190
Query: 130 GLSEARVQNFSQ 141
L+EARVQ + Q
Sbjct: 191 DLTEARVQVWFQ 202
>gi|113204604|ref|NP_006483.2| homeobox protein aristaless-like 3 [Homo sapiens]
gi|426330701|ref|XP_004026345.1| PREDICTED: homeobox protein aristaless-like 3 [Gorilla gorilla
gorilla]
gi|215273931|sp|O95076.2|ALX3_HUMAN RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|85566666|gb|AAI12008.1| ALX3 protein [Homo sapiens]
gi|109731688|gb|AAI13429.1| ALX homeobox 3 [Homo sapiens]
gi|119576834|gb|EAW56430.1| aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 75 SRHLSLSP-----ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 129
S HL LSP + K+ +K+RR+RT F+ QL ELE++F +THYPD + RE+L+ R
Sbjct: 131 SLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 190
Query: 130 GLSEARVQNFSQ 141
L+EARVQ + Q
Sbjct: 191 DLTEARVQVWFQ 202
>gi|46249382|ref|NP_005160.2| paired mesoderm homeobox protein 2A [Homo sapiens]
gi|297689630|ref|XP_002822248.1| PREDICTED: paired mesoderm homeobox protein 2A [Pongo abelii]
gi|77416873|sp|O14813.2|PHX2A_HUMAN RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|27371330|gb|AAH41564.1| Paired-like homeobox 2a [Homo sapiens]
gi|119595262|gb|EAW74856.1| paired-like (aristaless) homeobox 2a [Homo sapiens]
gi|158254722|dbj|BAF83334.1| unnamed protein product [Homo sapiens]
gi|167773113|gb|ABZ91991.1| paired-like homeobox 2a [synthetic construct]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|391341678|ref|XP_003745154.1| PREDICTED: aristaless-related homeobox protein-like [Metaseiulus
occidentalis]
Length = 252
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 41/55 (74%)
Query: 87 KSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K S K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 79 KPSRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVWFQ 133
>gi|332237569|ref|XP_003267978.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
[Nomascus leucogenys]
Length = 343
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 75 SRHLSLSP-----ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 129
S HL LSP + K+ +K+RR+RT F+ QL ELE++F +THYPD + RE+L+ R
Sbjct: 131 SLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 190
Query: 130 GLSEARVQNFSQ 141
L+EARVQ + Q
Sbjct: 191 DLTEARVQVWFQ 202
>gi|148684574|gb|EDL16521.1| paired-like homeobox 2a [Mus musculus]
Length = 263
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 71 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 122
>gi|344296919|ref|XP_003420149.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A-like [Loxodonta africana]
Length = 262
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 67 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 118
>gi|444706976|gb|ELW48288.1| Homeobox protein ARX [Tupaia chinensis]
Length = 147
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 36/48 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER F +THYPD F REEL+ RL L+EARVQ
Sbjct: 76 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 123
>gi|440891870|gb|ELR45335.1| Paired mesoderm homeobox protein 2B, partial [Bos grunniens mutus]
Length = 212
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|432868791|ref|XP_004071635.1| PREDICTED: homeobox protein unc-4 homolog [Oryzias latipes]
Length = 351
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 99 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLIESRVQVWFQ 149
>gi|224094163|ref|XP_002196043.1| PREDICTED: ALX homeobox protein 1 [Taeniopygia guttata]
Length = 328
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 95/226 (42%), Gaps = 60/226 (26%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 130 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 189
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTLNP-----AGIILSNHQPVSTPL 175
+ Q+ D+S + I N L ++ S P T
Sbjct: 190 RKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNAASGSVVTSCMLPRDT-- 247
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
C + PY + PR T + ++ F +H T + L A NG F
Sbjct: 248 SSC-MTPYSHSPR---------TDSGYTGFTNHQNQFSHMPLNNFFTDSLLSGATNGHAF 297
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P F ++SSIA LR+KAK+HA I A
Sbjct: 298 ETK---PEFE-------------RRSSSIAVLRMKAKEHAANISWA 327
>gi|2583019|gb|AAB82744.1| ARIX homeodomain protein [Homo sapiens]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|328703933|ref|XP_001942790.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
[Acyrthosiphon pisum]
Length = 408
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 50 KQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAAKIQLTEARVQVWFQ 100
>gi|194765997|ref|XP_001965111.1| GF23439 [Drosophila ananassae]
gi|190617721|gb|EDV33245.1| GF23439 [Drosophila ananassae]
Length = 613
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
IS C+S KQRR RT F+ QL+ELER F+ T YPD + REEL+QR L+EAR+
Sbjct: 199 ISDCESEPGIALKRKQRRCRTTFSAAQLDELERAFERTQYPDIYTREELAQRTNLTEARI 258
Query: 137 QNF 139
Q +
Sbjct: 259 QVW 261
>gi|345314187|ref|XP_003429473.1| PREDICTED: paired box protein Pax-7-like, partial [Ornithorhynchus
anatinus]
Length = 84
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRRSRT FT EQL ELE+ F+ THYPD + REEL+QR L+EARVQ
Sbjct: 21 KQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 67
>gi|157875755|pdb|1FJL|A Chain A, Homeodomain From The Drosophila Paired Protein Bound To A
Dna Oligonucleotide
gi|157875756|pdb|1FJL|B Chain B, Homeodomain From The Drosophila Paired Protein Bound To A
Dna Oligonucleotide
gi|157875757|pdb|1FJL|C Chain C, Homeodomain From The Drosophila Paired Protein Bound To A
Dna Oligonucleotide
Length = 81
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 6/65 (9%)
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
IS C+S KQRRSRT F+ QL+ELER F+ T YPD + REEL+QR L+EAR+
Sbjct: 3 ISDCESEPGIALKRKQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARI 62
Query: 137 QNFSQ 141
Q + Q
Sbjct: 63 QVWFQ 67
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 82
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S KQRR RT F+ QL ELER F +THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 216 SKRKQRRYRTTFSAFQLEELERAFQKTHYPDVFTREELAMRVDLTEARVQVWFQ 269
>gi|332210907|ref|XP_003254555.1| PREDICTED: paired mesoderm homeobox protein 2A [Nomascus
leucogenys]
Length = 287
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 91 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 142
>gi|114559041|ref|XP_524801.2| PREDICTED: ALX homeobox 3 [Pan troglodytes]
Length = 343
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 75 SRHLSLSP-----ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 129
S HL LSP + K+ +K+RR+RT F+ QL ELE++F +THYPD + RE+L+ R
Sbjct: 131 SLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 190
Query: 130 GLSEARVQNFSQ 141
L+EARVQ + Q
Sbjct: 191 DLTEARVQVWFQ 202
>gi|297664163|ref|XP_002810521.1| PREDICTED: homeobox protein aristaless-like 3 [Pongo abelii]
Length = 343
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 75 SRHLSLSP-----ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 129
S HL LSP + K+ +K+RR+RT F+ QL ELE++F +THYPD + RE+L+ R
Sbjct: 131 SLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 190
Query: 130 GLSEARVQNFSQ 141
L+EARVQ + Q
Sbjct: 191 DLTEARVQVWFQ 202
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 39/208 (18%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ------VLN 144
K RR+RT FT QL+ELER F+++HYPD + REEL+ ++ L E RVQ + Q
Sbjct: 141 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ 200
Query: 145 LLIDVSTVTINNTLNPAGIILSNHQPVST---------PLEPCRVAPYVNVPRLPTLPFS 195
+D S V +++ + ++ N P+ T PL+P +P + + ++P
Sbjct: 201 EKMDASAVKLHD----SPMLSFNRPPMHTNVGPMSNSLPLDPWLTSPLTSTTPVHSIPGF 256
Query: 196 ASTAAAFSAFDPTLLSAAHQY----AAAAATVAALGNAPNGSIFSAASQYPSFSLATLAA 251
+ A P H + + ++ + P +YP L
Sbjct: 257 MGPSQGLQAGYP-----GHGFLNTPQSMGQSMQPMAPPPYQCPAVFTDKYP------LED 305
Query: 252 LHQDRLLSKNSSIADLRLKAKKHAEAIE 279
+Q ++SSIA LR+KAK+H ++++
Sbjct: 306 TNQ-----RSSSIASLRMKAKEHIQSMD 328
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 63 KIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQVWFQ 113
>gi|16758738|ref|NP_446321.1| paired mesoderm homeobox protein 2A [Rattus norvegicus]
gi|8134639|sp|Q62782.1|PHX2A_RAT RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|1002494|gb|AAB04168.1| Arix1 homeodomain protein [Rattus norvegicus]
Length = 281
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 139
>gi|410917898|ref|XP_003972423.1| PREDICTED: homeobox protein unc-4 homolog [Takifugu rubripes]
Length = 512
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 101 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQ 151
>gi|449273455|gb|EMC82949.1| Paired mesoderm homeobox protein 2B [Columba livia]
Length = 149
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|410957796|ref|XP_003985510.1| PREDICTED: paired mesoderm homeobox protein 2B [Felis catus]
Length = 232
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|440907876|gb|ELR57965.1| Paired mesoderm homeobox protein 2A, partial [Bos grunniens mutus]
Length = 155
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 89 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 140
>gi|344252001|gb|EGW08105.1| ALX homeobox protein 1 [Cricetulus griseus]
Length = 295
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 97/226 (42%), Gaps = 60/226 (26%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 97 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 156
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTLNPAGIILSNHQPVSTPLEP--- 177
+ Q+ D+S + I N L P S V++ + P
Sbjct: 157 RKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWPGNA--SGGSVVTSCMLPRDA 214
Query: 178 --CRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
C + PY + PR T ++++ F +H T + L A NG F
Sbjct: 215 SSC-MTPYSHSPR---------TDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAF 264
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P F ++SSIA LR+KAK+H I A
Sbjct: 265 ETK---PEFE-------------RRSSSIAVLRMKAKEHTANISWA 294
>gi|158293967|ref|XP_315326.4| AGAP005311-PA [Anopheles gambiae str. PEST]
gi|157015346|gb|EAA11051.4| AGAP005311-PA [Anopheles gambiae str. PEST]
Length = 349
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 115 KIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQVWFQ 165
>gi|291384330|ref|XP_002708569.1| PREDICTED: paired-like homeobox 2a-like [Oryctolagus cuniculus]
Length = 290
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 94 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 144
>gi|291412928|ref|XP_002722729.1| PREDICTED: orthopedia homeobox [Oryctolagus cuniculus]
Length = 259
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 149
>gi|350418342|ref|XP_003491830.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Bombus
impatiens]
Length = 200
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQVLNLLIDVS 150
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ S VL +
Sbjct: 137 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ-VSGVLTQRKKIV 195
Query: 151 TVTIN 155
T+N
Sbjct: 196 KPTMN 200
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL ELE F +THYPD F RE+L+ ++ L+EARVQ + Q
Sbjct: 68 KQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 118
>gi|397478868|ref|XP_003810757.1| PREDICTED: homeobox protein aristaless-like 3, partial [Pan
paniscus]
Length = 295
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 75 SRHLSLSP-----ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 129
S HL LSP + K+ +K+RR+RT F+ QL ELE++F +THYPD + RE+L+ R
Sbjct: 83 SLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 142
Query: 130 GLSEARVQNFSQ 141
L+EARVQ + Q
Sbjct: 143 DLTEARVQVWFQ 154
>gi|270005124|gb|EFA01572.1| hypothetical protein TcasGA2_TC007133 [Tribolium castaneum]
Length = 169
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ+
Sbjct: 39 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQD 86
>gi|395521290|ref|XP_003764751.1| PREDICTED: paired mesoderm homeobox protein 2A [Sarcophilus
harrisii]
Length = 294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 92 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 142
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELE+ F THYPD F REEL+ ++GL+EAR+Q + Q
Sbjct: 99 KQRRYRTTFTSFQLEELEKAFTRTHYPDVFTREELAIKIGLTEARIQVWFQ 149
>gi|334327857|ref|XP_001369519.2| PREDICTED: paired mesoderm homeobox protein 2A-like [Monodelphis
domestica]
Length = 234
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 25 SGLSEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 82
>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
Length = 447
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
+S C S KQRRSRT FT QL+ELE+ F+ T YPD + REEL+QR L+EAR+
Sbjct: 161 VSDCDSEPGIPLKRKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARI 220
Query: 137 QNF 139
Q +
Sbjct: 221 QVW 223
>gi|147899161|ref|NP_001080642.1| UNC homeobox [Xenopus laevis]
gi|28278689|gb|AAH44278.1| Uncx4.1-prov protein [Xenopus laevis]
gi|393689250|gb|AFN10839.1| UNC homeobox transcription factor [Xenopus laevis]
Length = 163
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ
Sbjct: 100 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQ 146
>gi|307198548|gb|EFN79433.1| Homeobox protein OTX1 [Harpegnathos saltator]
Length = 335
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF----------- 139
KQRR RT FT QL+ LE LF +T YPD FMREE++ ++ L E+RVQ +
Sbjct: 85 KQRRERTTFTRAQLDVLEGLFSKTKYPDIFMREEVAMKINLPESRVQVWFKNRRAKCRQQ 144
Query: 140 SQVLNLLIDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTA 199
+ D + + T NPA SN P +P P VP T P S T
Sbjct: 145 QKQQQQQQDKAPRSKKPTGNPA----SNPPPGKSPSIATTPTPASAVPA--TTPLSGGTG 198
Query: 200 AAFSAFDPTLLSAAHQYAAAA 220
+ +A P LL + QY A
Sbjct: 199 GS-AASSPALLRDSPQYKPAG 218
>gi|195386642|ref|XP_002052013.1| GJ23973 [Drosophila virilis]
gi|194148470|gb|EDW64168.1| GJ23973 [Drosophila virilis]
Length = 619
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
+S C+S KQRR RT F+ QL ELER F+ T YPD F REEL+QR L+EAR+
Sbjct: 195 VSDCESEPGIALKRKQRRCRTTFSAAQLEELERAFERTQYPDIFTREELAQRTNLTEARI 254
Query: 137 QNF 139
Q +
Sbjct: 255 QVW 257
>gi|15146041|gb|AAK82937.1| pairberry 2 transcription factor [Schistocerca americana]
Length = 341
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT F+ +QL LER F T YPD + REEL++R GLSEAR+Q +
Sbjct: 133 KQRRSRTTFSGDQLETLERAFQRTQYPDVYTREELARRTGLSEARIQVW 181
>gi|328788663|ref|XP_001120833.2| PREDICTED: paired mesoderm homeobox protein 2B [Apis mellifera]
Length = 196
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER F ETHYPD + REE++ ++ L+EARVQ
Sbjct: 137 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 183
>gi|291385705|ref|XP_002709324.1| PREDICTED: paired-like homeobox 2b [Oryctolagus cuniculus]
Length = 250
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|195124191|ref|XP_002006577.1| GI21136 [Drosophila mojavensis]
gi|193911645|gb|EDW10512.1| GI21136 [Drosophila mojavensis]
Length = 277
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 89 SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ--VLNLL 146
S K RR+RT F+ QL LE++F+ THYPDAF+REEL+ ++ LSEARVQ + Q
Sbjct: 122 SRKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFR 181
Query: 147 IDVSTVTINNTLNPAGIILSNHQPVSTPLEPCRVAPYVNVPRLPTLPFSASTAAAFSAFD 206
+ +V++ L ST L P V N+ + P L SA A F
Sbjct: 182 RNERSVSLGRPL----------LDTSTQLVPAPVP--NNMHKYPNLTHSAPPGAYALNFA 229
Query: 207 PTLLSAAHQYA----------AAAATVAALGNAPNGSIFSAASQYPSF 244
P L + Y+ ++A V + APN + A + YPS
Sbjct: 230 PLELRSCQNYSNCYGGFGANPSSANGVCSFFGAPNYCVNYAKNAYPSL 277
>gi|328719097|ref|XP_001949018.2| PREDICTED: paired box protein Pax-3-B-like [Acyrthosiphon pisum]
Length = 574
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT QL+ELE+ F+ T YPD + REEL+QR L+EAR+Q +
Sbjct: 192 KQRRSRTTFTALQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVW 240
>gi|328703501|ref|XP_003242223.1| PREDICTED: retinal homeobox protein Rx1-like [Acyrthosiphon pisum]
Length = 302
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K RRSRT FT QL++LER F++T YPD F REEL+ RL LSEARVQ + Q
Sbjct: 62 KVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVWFQ 112
>gi|296473008|tpg|DAA15123.1| TPA: UNC homeobox [Bos taurus]
Length = 213
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ
Sbjct: 105 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQ 151
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 4 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQ 54
>gi|148222011|ref|NP_001079116.1| ALX homeobox protein 1 [Xenopus laevis]
gi|3023596|sp|Q91574.1|ALX1_XENLA RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1; AltName: Full=XCART1
gi|557062|gb|AAA50368.1| cartilage homeoprotein 1 precursor [Xenopus laevis]
Length = 335
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 100/228 (43%), Gaps = 64/228 (28%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 137 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 196
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTL---NPAG--IILSNHQPVSTPL 175
+ Q+ D+S + I N L NP+G ++ S P
Sbjct: 197 RKRERYGQIQQAKSHFAATYDISVLPRADSYPQIQNNLWAGNPSGGSVVTS----CMLPR 252
Query: 176 EP--CRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGS 233
EP C + PY + S+ T + ++ F +H T + L + NG
Sbjct: 253 EPSSC-MTPYSH---------SSRTDSPYTGFTNHQNQFSHMPLNIFFTESLLSGSANGH 302
Query: 234 IFSAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
F A P F ++SSIA LR+KAK+H I A
Sbjct: 303 SFEAK---PEFE-------------RRSSSIAVLRMKAKEHTANISWA 334
>gi|355713903|gb|AES04824.1| paired related homeobox 1 [Mustela putorius furo]
Length = 109
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT F QL LER+F+ THYPDAF+RE+L++R+ L+EARVQ + Q
Sbjct: 3 KQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQ 53
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 82
>gi|426369665|ref|XP_004051805.1| PREDICTED: paired mesoderm homeobox protein 2A [Gorilla gorilla
gorilla]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 146 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 197
>gi|328705901|ref|XP_003242937.1| PREDICTED: hypothetical protein LOC100570786 [Acyrthosiphon pisum]
Length = 400
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE+++ + L+EARVQ + Q
Sbjct: 147 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAKHIELTEARVQVWFQ 197
>gi|354488799|ref|XP_003506553.1| PREDICTED: ALX homeobox protein 1 [Cricetulus griseus]
Length = 326
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 97/226 (42%), Gaps = 60/226 (26%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 128 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 187
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTLNPAGIILSNHQPVSTPLEP--- 177
+ Q+ D+S + I N L P S V++ + P
Sbjct: 188 RKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWPGNA--SGGSVVTSCMLPRDA 245
Query: 178 --CRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
C + PY + PR T ++++ F +H T + L A NG F
Sbjct: 246 SSC-MTPYSHSPR---------TDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAF 295
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P F ++SSIA LR+KAK+H I A
Sbjct: 296 ETK---PEFE-------------RRSSSIAVLRMKAKEHTANISWA 325
>gi|308197324|gb|ADO17770.1| Pax3/7-1 protein [Parhyale hawaiensis]
Length = 486
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL LER F++T YPD + REEL+Q+ L+EARVQ +
Sbjct: 190 KQRRSRTTFTAEQLEILERSFEKTQYPDVYTREELAQKARLTEARVQVW 238
>gi|149059075|gb|EDM10082.1| orthopedia homolog (Drosophila), isoform CRA_b [Rattus norvegicus]
Length = 160
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 149
>gi|301772146|ref|XP_002921493.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Ailuropoda melanoleuca]
gi|281351965|gb|EFB27549.1| hypothetical protein PANDA_010383 [Ailuropoda melanoleuca]
Length = 193
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
>gi|321474441|gb|EFX85406.1| hypothetical protein DAPPUDRAFT_45999 [Daphnia pulex]
Length = 250
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRR RT FT +Q++ELE+ FD T YPD + REEL+QR L+EAR+Q +
Sbjct: 182 QKQRRHRTTFTAQQMDELEKAFDRTQYPDVYTREELAQRTKLTEARIQVW 231
>gi|300796276|ref|NP_001179220.1| ALX homeobox protein 1 [Bos taurus]
gi|426224245|ref|XP_004006284.1| PREDICTED: ALX homeobox protein 1 [Ovis aries]
gi|296487990|tpg|DAA30103.1| TPA: ALX homeobox protein 1-like [Bos taurus]
Length = 326
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 99/226 (43%), Gaps = 60/226 (26%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 128 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 187
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTL---NPAG--IILSNHQPVSTPL 175
+ Q+ D+S + I N L N +G ++ S P T
Sbjct: 188 RKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDT-- 245
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
C + PY + PR T ++++ F +H T + L A NG F
Sbjct: 246 SSC-MTPYSHSPR---------TDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAF 295
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P F ++SSIA LR+KAK+HA I A
Sbjct: 296 ETK---PEFE-------------RRSSSIAVLRMKAKEHAANISWA 325
>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
Length = 414
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 83 ISSCKS------SNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 136
+S C S KQRRSRT FT QL+ELE+ F+ T YPD + REEL+QR L+EAR+
Sbjct: 205 VSDCDSEPGIPLKRKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARI 264
Query: 137 QNF 139
Q +
Sbjct: 265 QVW 267
>gi|195118214|ref|XP_002003635.1| GI21809 [Drosophila mojavensis]
gi|193914210|gb|EDW13077.1| GI21809 [Drosophila mojavensis]
Length = 392
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 4 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQ 54
>gi|9967884|emb|CAC06429.1| homeobrain protein [Drosophila melanogaster]
Length = 409
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 44 TDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
T+++ L V+N++E L SS ++ H +S + K RRSRT FT Q
Sbjct: 120 TNTDGGLDVDNDDE------LSSSLNNGHDLS---------DMERPRKVRRSRTTFTTFQ 164
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
L++LER F++T YPD F RE+L+ RL LSEARVQ + Q
Sbjct: 165 LHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 202
>gi|440898843|gb|ELR50257.1| ALX homeobox protein 1 [Bos grunniens mutus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 99/226 (43%), Gaps = 60/226 (26%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 128 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 187
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTL---NPAG--IILSNHQPVSTPL 175
+ Q+ D+S + I N L N +G ++ S P T
Sbjct: 188 RKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDT-- 245
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
C + PY + PR T ++++ F +H T + L A NG F
Sbjct: 246 SSC-MTPYSHSPR---------TDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAF 295
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P F ++SSIA LR+KAK+HA I A
Sbjct: 296 ETK---PEFE-------------RRSSSIAVLRMKAKEHAANISWA 325
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQ 59
>gi|194756342|ref|XP_001960438.1| GF11512 [Drosophila ananassae]
gi|190621736|gb|EDV37260.1| GF11512 [Drosophila ananassae]
Length = 458
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNF 139
KQRRSRT FT EQL LER F T YPD + REEL+Q GL+EAR+Q +
Sbjct: 181 KQRRSRTTFTAEQLEALERAFARTQYPDVYTREELAQTTGLTEARIQVW 229
>gi|397489578|ref|XP_003815802.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2A
[Pan paniscus]
Length = 221
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 82 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 132
>gi|157110013|ref|XP_001650918.1| hypothetical protein AaeL_AAEL015197 [Aedes aegypti]
gi|108868397|gb|EAT32622.1| AAEL015197-PA, partial [Aedes aegypti]
Length = 74
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
+QRR+RT FT +QL ELE LF +THYPD F+REE++ R+ LSEARVQ
Sbjct: 2 RQRRNRTTFTPQQLQELETLFQKTHYPDVFLREEVALRISLSEARVQ 48
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQ 59
>gi|26342783|dbj|BAC35048.1| unnamed protein product [Mus musculus]
Length = 192
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQ 59
>gi|440910671|gb|ELR60441.1| Homeobox protein orthopedia, partial [Bos grunniens mutus]
Length = 202
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 94 RSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
R RT FT QLNELER F +THYPD FMREEL+ R+GL+E+RVQ
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 149
>gi|313224351|emb|CBY20140.1| unnamed protein product [Oikopleura dioica]
Length = 291
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 84 SSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
S+ +S KQRR RT F+ QL ELE F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 118 SAAESRRKQRRFRTTFSAYQLEELENTFVRTHYPDVFTREELAARIDLTEARVQVWFQ 175
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 4 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQ 54
>gi|139948588|ref|NP_001077272.1| homeobox protein unc-4 homolog [Bos taurus]
gi|126010703|gb|AAI33625.1| UNCX protein [Bos taurus]
Length = 293
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ
Sbjct: 105 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQ 151
>gi|47220084|emb|CAG12232.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 98 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLIESRVQVWFQ 148
>gi|395856676|ref|XP_003800747.1| PREDICTED: uncharacterized protein LOC100945104 isoform 2 [Otolemur
garnettii]
Length = 281
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ
Sbjct: 97 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|281340522|gb|EFB16106.1| hypothetical protein PANDA_016951 [Ailuropoda melanoleuca]
Length = 172
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ + Q
Sbjct: 75 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 126
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 4 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQ 54
>gi|126339394|ref|XP_001364457.1| PREDICTED: ALX homeobox protein 1 [Monodelphis domestica]
Length = 326
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 95/226 (42%), Gaps = 60/226 (26%)
Query: 88 SSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ---------- 137
SS+K+RR RT FT QL ELE++F +THYPD ++RE+L+ R L+EARVQ
Sbjct: 128 SSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKW 187
Query: 138 ----NFSQV------LNLLIDVSTV-------TINNTL---NPAG--IILSNHQPVSTPL 175
+ Q+ D+S + I N + N G ++ S P T
Sbjct: 188 RKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNMWAGNATGGSVVTSCMLPRDT-- 245
Query: 176 EPCRVAPYVNVPRLPTLPFSASTAAAFSAFDPTLLSAAHQYAAAAATVAALGNAPNGSIF 235
C + PY + PR T + ++ F H T + L A NG F
Sbjct: 246 SSC-MTPYSHTPR---------TDSGYTGFSNHQNQFGHVPLNNFFTDSLLSGATNGHAF 295
Query: 236 SAASQYPSFSLATLAALHQDRLLSKNSSIADLRLKAKKHAEAIEMA 281
P F ++SSIA LR+KAK+H I A
Sbjct: 296 ETK---PEFE-------------RRSSSIAVLRMKAKEHTANISWA 325
>gi|432956147|ref|XP_004085652.1| PREDICTED: homeobox protein unc-4 homolog [Oryzias latipes]
Length = 151
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
K+RR+RTNFT QL ELE+ F+E+HYPD FMRE L+ RL L E+RVQ
Sbjct: 98 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQ 144
>gi|406719564|dbj|BAM45081.1| dorsal root ganglia homeobox, partial [Gallus gallus]
Length = 156
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 24 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 74
>gi|256070449|ref|XP_002571555.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 415
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%)
Query: 83 ISSCKSSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
I+ KQRR RT FT QL ELER F ETHYPD + RE+L+ R+ L+EARVQ + Q
Sbjct: 170 ITQLHEKRKQRRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDLTEARVQVWFQ 228
>gi|28573684|ref|NP_788420.1| homeobrain [Drosophila melanogaster]
gi|28380639|gb|AAF46642.3| homeobrain [Drosophila melanogaster]
gi|66571176|gb|AAY51553.1| IP01393p [Drosophila melanogaster]
gi|220943354|gb|ACL84220.1| hbn-PA [synthetic construct]
gi|220953324|gb|ACL89205.1| hbn-PA [synthetic construct]
Length = 409
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 44 TDSNSDLKVNNENECDDSNRLPSSESSRHHISRHLSLSPISSCKSSNKQRRSRTNFTLEQ 103
T+++ L V+N++E L SS ++ H +S + K RRSRT FT Q
Sbjct: 120 TNTDGGLDVDNDDE------LSSSLNNGHDLS---------DMERPRKVRRSRTTFTTFQ 164
Query: 104 LNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
L++LER F++T YPD F RE+L+ RL LSEARVQ + Q
Sbjct: 165 LHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 202
>gi|47228865|emb|CAG09380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 137
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ
Sbjct: 25 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 71
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR+RT FTL+QL LE +F +THYPD F REEL+ ++ L+EARVQ + Q
Sbjct: 32 KQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 82
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F QL ELER F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 4 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQ 54
>gi|432108245|gb|ELK33133.1| Paired mesoderm homeobox protein 2B [Myotis davidii]
Length = 236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 90 NKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQN 138
KQRR RT FT QL ELER+F ETHYPD + REEL+ ++ L+EARVQ
Sbjct: 79 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQR 127
>gi|405959975|gb|EKC25942.1| Homeobox protein unc-4-like protein [Crassostrea gigas]
Length = 392
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNFT QL ELER F ++HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 102 KRRRTRTNFTGWQLEELERAFQDSHYPDVFMREALALRLDLVESRVQVWFQ 152
>gi|260801387|ref|XP_002595577.1| paired-like homeodomain protein unc-4 [Branchiostoma floridae]
gi|229280824|gb|EEN51589.1| paired-like homeodomain protein unc-4 [Branchiostoma floridae]
Length = 499
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
K+RR+RTNF QL ELER F E+HYPD FMRE L+ RL L E+RVQ + Q
Sbjct: 114 KRRRTRTNFNSWQLEELERAFQESHYPDVFMREALALRLDLVESRVQVWFQ 164
>gi|391332291|ref|XP_003740569.1| PREDICTED: uncharacterized protein LOC100905961 [Metaseiulus
occidentalis]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT FT QL ELER F ETHYPD + REE++ + L+EARVQ + Q
Sbjct: 139 KQRRIRTTFTSAQLRELERAFQETHYPDIYTREEIAMKTDLTEARVQVWFQ 189
>gi|324533481|gb|ADY49311.1| Paired mesoderm homeobox protein 2B [Ascaris suum]
Length = 146
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 86 CKSSN-----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFS 140
C S N KQRR RT FT QL ELER F ETHYPD + RE+++ R+ L+EARVQ +
Sbjct: 22 CGSGNPSERRKQRRIRTTFTPGQLKELERAFLETHYPDIYTREDIAMRIDLTEARVQVWF 81
Query: 141 Q 141
Q
Sbjct: 82 Q 82
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 91 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQNFSQ 141
KQRR RT F+ QL+ELE++F THYPD F REEL+ R+ L+EARVQ + Q
Sbjct: 116 KQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATRVQLTEARVQVWFQ 166
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.123 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,092,888,630
Number of Sequences: 23463169
Number of extensions: 159747398
Number of successful extensions: 726931
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6144
Number of HSP's successfully gapped in prelim test: 1012
Number of HSP's that attempted gapping in prelim test: 697142
Number of HSP's gapped (non-prelim): 28215
length of query: 288
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 147
effective length of database: 9,050,888,538
effective search space: 1330480615086
effective search space used: 1330480615086
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)